Query 002356
Match_columns 931
No_of_seqs 637 out of 4586
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 22:59:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002356.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002356hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.2E-50 7.6E-55 441.1 20.2 232 667-925 30-261 (311)
2 4b9d_A Serine/threonine-protei 100.0 9.8E-49 3.3E-53 435.1 23.0 227 668-922 23-250 (350)
3 3hyh_A Carbon catabolite-derep 100.0 6.6E-48 2.3E-52 415.8 23.6 228 668-926 12-240 (275)
4 3ubd_A Ribosomal protein S6 ki 100.0 2.7E-48 9.3E-53 424.5 16.8 231 666-926 21-254 (304)
5 4fih_A Serine/threonine-protei 100.0 3.5E-47 1.2E-51 421.9 22.3 214 668-914 73-286 (346)
6 4fie_A Serine/threonine-protei 100.0 3E-46 1E-50 424.5 24.2 227 668-927 150-377 (423)
7 4g3f_A NF-kappa-beta-inducing 100.0 1.6E-46 5.5E-51 415.4 18.5 225 667-923 56-284 (336)
8 4asz_A BDNF/NT-3 growth factor 100.0 1.7E-45 5.7E-50 403.1 21.1 236 665-928 9-262 (299)
9 3fpq_A Serine/threonine-protei 100.0 8.7E-45 3E-49 394.8 24.6 214 669-915 25-247 (290)
10 4aoj_A High affinity nerve gro 100.0 2.4E-44 8.3E-49 399.2 24.8 236 665-928 37-292 (329)
11 3omv_A RAF proto-oncogene seri 100.0 6.5E-44 2.2E-48 390.7 24.0 222 663-915 30-254 (307)
12 4gt4_A Tyrosine-protein kinase 100.0 4E-44 1.4E-48 393.9 22.3 236 666-928 23-279 (308)
13 3v5w_A G-protein coupled recep 100.0 4E-44 1.4E-48 424.5 22.0 234 662-926 182-422 (689)
14 4b99_A Mitogen-activated prote 100.0 5E-43 1.7E-47 398.5 23.3 220 668-914 53-279 (398)
15 4g31_A Eukaryotic translation 100.0 2.2E-42 7.5E-47 378.9 22.3 225 669-913 5-243 (299)
16 3uto_A Twitchin; kinase, muscl 100.0 7.8E-42 2.7E-46 407.2 24.4 221 668-920 156-378 (573)
17 4ase_A Vascular endothelial gr 100.0 4E-42 1.4E-46 384.6 20.2 238 664-928 59-320 (353)
18 4f9c_A Cell division cycle 7-r 100.0 2.6E-41 9E-46 380.2 23.3 234 668-911 20-261 (361)
19 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.2E-40 7.6E-45 372.7 21.7 233 664-925 18-251 (353)
20 1o6l_A RAC-beta serine/threoni 100.0 5.6E-40 1.9E-44 367.1 23.9 232 666-926 2-233 (337)
21 1fot_A TPK1 delta, CAMP-depend 100.0 1.1E-39 3.6E-44 362.0 22.2 228 666-925 3-230 (318)
22 2i0e_A Protein kinase C-beta I 100.0 1.5E-39 5.2E-44 365.8 22.7 233 665-926 16-249 (353)
23 1xjd_A Protein kinase C, theta 100.0 2.1E-39 7.3E-44 363.4 23.7 232 665-925 13-245 (345)
24 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.9E-39 6.4E-44 364.8 22.3 229 666-926 38-266 (350)
25 3fe3_A MAP/microtubule affinit 100.0 6E-39 2E-43 357.5 25.8 230 665-925 11-241 (328)
26 4dc2_A Protein kinase C IOTA t 100.0 3.7E-39 1.3E-43 367.4 24.0 233 665-926 48-290 (396)
27 2r5t_A Serine/threonine-protei 100.0 1.9E-39 6.4E-44 367.7 21.4 233 665-926 34-267 (373)
28 3a8x_A Protein kinase C IOTA t 100.0 8.5E-39 2.9E-43 358.8 26.4 231 666-925 6-246 (345)
29 3v8s_A RHO-associated protein 100.0 1E-39 3.5E-44 374.0 18.7 236 665-929 65-306 (410)
30 3hmm_A TGF-beta receptor type- 100.0 1.6E-39 5.4E-44 357.5 18.4 199 669-899 3-219 (303)
31 4fr4_A YANK1, serine/threonine 100.0 9.5E-39 3.2E-43 362.8 22.3 235 661-925 7-247 (384)
32 4aw2_A Serine/threonine-protei 100.0 5.5E-39 1.9E-43 370.7 20.4 230 664-920 69-305 (437)
33 3zgw_A Maternal embryonic leuc 100.0 1.6E-38 5.4E-43 356.5 23.1 228 668-925 9-237 (347)
34 2vd5_A DMPK protein; serine/th 100.0 1E-38 3.6E-43 365.8 19.2 229 664-919 56-293 (412)
35 2yab_A Death-associated protei 100.0 7E-38 2.4E-42 353.3 24.1 222 668-919 11-239 (361)
36 3a62_A Ribosomal protein S6 ki 100.0 8.5E-38 2.9E-42 348.1 23.8 233 665-926 13-249 (327)
37 3c4z_A Rhodopsin kinase; Ser/T 100.0 8.8E-38 3E-42 368.7 23.5 235 665-926 181-421 (543)
38 4ejn_A RAC-alpha serine/threon 100.0 6.3E-38 2.2E-42 364.4 21.8 233 664-925 143-376 (446)
39 4eqm_A Protein kinase; transfe 100.0 2.4E-37 8.2E-42 339.1 24.6 220 667-914 9-228 (294)
40 2bdw_A Hypothetical protein K1 100.0 3.6E-37 1.2E-41 348.0 26.5 222 668-920 28-252 (362)
41 3soa_A Calcium/calmodulin-depe 100.0 3.2E-37 1.1E-41 357.2 26.3 223 668-920 10-235 (444)
42 3pfq_A PKC-B, PKC-beta, protei 100.0 1.1E-37 3.7E-42 379.3 21.9 233 665-926 337-570 (674)
43 2acx_A G protein-coupled recep 100.0 1.6E-37 5.3E-42 367.5 22.3 233 665-925 180-416 (576)
44 3fxz_A Serine/threonine-protei 100.0 5.7E-37 2E-41 336.6 24.8 212 668-912 19-230 (297)
45 1tki_A Titin; serine kinase, m 100.0 6E-37 2.1E-41 340.4 24.0 219 668-919 4-224 (321)
46 3h4j_B AMPK kdaid, SNF1-like p 100.0 6.2E-38 2.1E-42 350.2 15.0 227 667-924 7-234 (336)
47 2y0a_A Death-associated protei 100.0 1.4E-36 4.8E-41 338.1 24.4 222 668-919 10-238 (326)
48 2y94_A 5'-AMP-activated protei 100.0 4E-37 1.4E-41 358.8 20.3 231 665-925 12-243 (476)
49 2zv2_A Calcium/calmodulin-depe 100.0 8.1E-37 2.8E-41 335.2 21.5 234 663-926 7-268 (298)
50 2eue_A Carbon catabolite derep 100.0 1.5E-36 5E-41 329.0 22.9 228 667-925 11-239 (275)
51 3fdn_A Serine/threonine-protei 100.0 8.8E-37 3E-41 331.5 21.1 230 665-925 5-234 (279)
52 3ork_A Serine/threonine protei 100.0 4.6E-37 1.6E-41 339.5 18.8 225 667-917 10-238 (311)
53 3c0i_A Peripheral plasma membr 100.0 1.7E-36 5.7E-41 341.1 22.6 225 666-918 21-252 (351)
54 3llt_A Serine/threonine kinase 100.0 3.6E-36 1.2E-40 339.2 25.0 220 664-918 30-279 (360)
55 3uc3_A Serine/threonine-protei 100.0 3.9E-36 1.3E-40 339.4 25.2 229 666-928 17-252 (361)
56 2psq_A Fibroblast growth facto 100.0 3.6E-36 1.2E-40 340.8 23.9 233 665-924 77-333 (370)
57 2vgo_A Serine/threonine-protei 100.0 2.8E-36 9.7E-41 328.3 22.0 228 666-924 11-238 (284)
58 3kul_A Ephrin type-A receptor 100.0 2E-36 6.8E-41 336.7 20.8 233 664-923 44-281 (325)
59 2rku_A Serine/threonine-protei 100.0 8.9E-36 3E-40 326.1 25.5 229 667-924 13-241 (294)
60 1kob_A Twitchin; kinase, intra 100.0 4.5E-36 1.5E-40 341.6 23.9 221 668-920 50-272 (387)
61 2owb_A Serine/threonine-protei 100.0 6.3E-36 2.2E-40 334.1 24.7 230 666-924 38-267 (335)
62 3p86_A Serine/threonine-protei 100.0 6.3E-36 2.2E-40 330.3 23.6 232 663-924 31-267 (309)
63 3gni_B Strad alpha; kinase fol 100.0 4.7E-36 1.6E-40 342.2 22.5 229 666-915 22-254 (389)
64 3tki_A Serine/threonine-protei 100.0 2.4E-36 8.1E-41 335.9 19.3 222 668-918 6-229 (323)
65 3kk8_A Calcium/calmodulin depe 100.0 2.7E-35 9.2E-40 320.3 26.6 222 668-920 5-229 (284)
66 1nxk_A MAP kinase-activated pr 100.0 6.3E-36 2.1E-40 342.4 22.6 216 668-919 60-288 (400)
67 2izr_A Casein kinase I isoform 100.0 6E-36 2E-40 333.4 21.1 224 665-915 5-237 (330)
68 2x4f_A Myosin light chain kina 100.0 1.1E-35 3.9E-40 337.0 23.6 219 669-919 87-309 (373)
69 3o0g_A Cell division protein k 100.0 1.4E-35 4.7E-40 324.4 23.1 214 669-912 2-217 (292)
70 3nyv_A Calmodulin-domain prote 100.0 4.8E-36 1.6E-40 352.3 20.3 222 666-918 23-247 (484)
71 3oz6_A Mitogen-activated prote 100.0 1.1E-35 3.8E-40 339.0 22.8 234 668-912 8-245 (388)
72 2qr7_A Ribosomal protein S6 ki 100.0 6.6E-36 2.3E-40 334.9 20.4 217 668-920 21-245 (342)
73 3g33_A Cell division protein k 100.0 1.2E-35 4E-40 327.5 22.0 218 666-912 6-233 (308)
74 4hcu_A Tyrosine-protein kinase 100.0 1.4E-35 4.8E-40 320.2 22.1 225 664-920 5-231 (269)
75 1u5q_A Serine/threonine protei 100.0 4E-35 1.4E-39 329.4 26.6 214 669-915 54-270 (348)
76 2a2a_A Death-associated protei 100.0 1.7E-35 5.7E-40 328.5 23.3 222 668-919 11-239 (321)
77 3ttj_A Mitogen-activated prote 100.0 1.3E-35 4.3E-40 346.2 23.3 212 667-912 60-277 (464)
78 3f3z_A Calcium/calmodulin-depe 100.0 1.8E-35 6.1E-40 320.6 22.8 218 668-919 8-228 (277)
79 2w4o_A Calcium/calmodulin-depe 100.0 1.9E-35 6.5E-40 332.2 23.5 218 667-919 51-272 (349)
80 1luf_A Muscle-specific tyrosin 100.0 1.4E-35 4.6E-40 331.8 22.2 233 665-924 43-304 (343)
81 2h6d_A 5'-AMP-activated protei 100.0 1.3E-35 4.4E-40 321.4 21.4 230 665-924 7-237 (276)
82 3l9p_A Anaplastic lymphoma kin 100.0 6.6E-36 2.3E-40 338.3 19.7 232 665-923 67-313 (367)
83 3kn6_A Ribosomal protein S6 ki 100.0 1.4E-35 4.7E-40 330.0 21.9 216 669-919 8-237 (325)
84 2pmi_A Negative RE, cyclin-dep 100.0 1.1E-35 3.6E-40 329.6 20.8 215 668-912 4-223 (317)
85 3q5i_A Protein kinase; CDPK, m 100.0 2.9E-35 1E-39 347.3 25.8 221 667-918 34-267 (504)
86 3cok_A Serine/threonine-protei 100.0 4.3E-36 1.5E-40 325.6 16.7 227 668-922 10-236 (278)
87 3kfa_A Tyrosine-protein kinase 100.0 1.1E-35 3.7E-40 324.1 19.7 230 663-922 7-238 (288)
88 3tt0_A Basic fibroblast growth 100.0 5.3E-35 1.8E-39 332.7 26.1 233 664-923 64-320 (382)
89 3niz_A Rhodanese family protei 100.0 1.6E-35 5.5E-40 327.3 21.0 217 665-912 17-234 (311)
90 3mwu_A Calmodulin-domain prote 100.0 1.7E-35 5.7E-40 347.8 22.0 219 668-918 21-242 (486)
91 3s95_A LIMK-1, LIM domain kina 100.0 3.8E-35 1.3E-39 323.7 23.6 218 666-900 7-224 (310)
92 1ob3_A PFPK5, cell division co 100.0 1.7E-35 5.7E-40 323.2 20.1 213 669-912 2-215 (288)
93 2h34_A Serine/threonine-protei 100.0 3.1E-35 1.1E-39 324.5 22.5 219 666-912 31-249 (309)
94 3lij_A Calcium/calmodulin depe 100.0 2.3E-35 7.9E-40 347.3 22.7 220 668-919 36-258 (494)
95 4euu_A Serine/threonine-protei 100.0 2.3E-35 7.8E-40 327.0 21.3 220 666-915 6-244 (319)
96 2c30_A Serine/threonine-protei 100.0 5.3E-35 1.8E-39 324.7 24.1 213 670-915 46-258 (321)
97 3rp9_A Mitogen-activated prote 100.0 2.7E-35 9.4E-40 343.4 22.8 231 668-902 52-299 (458)
98 2jam_A Calcium/calmodulin-depe 100.0 4.8E-35 1.7E-39 322.0 22.8 219 668-920 8-229 (304)
99 3cbl_A C-FES, proto-oncogene t 100.0 7.9E-36 2.7E-40 338.9 16.8 236 663-926 108-345 (377)
100 2ivs_A Proto-oncogene tyrosine 100.0 2.1E-35 7.2E-40 325.8 19.7 234 662-922 16-278 (314)
101 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.5E-35 5.2E-40 335.0 18.8 205 664-899 60-286 (365)
102 4agu_A Cyclin-dependent kinase 100.0 5.7E-35 2E-39 322.2 22.9 215 668-912 2-217 (311)
103 3vhe_A Vascular endothelial gr 100.0 1.5E-35 5.1E-40 333.8 18.5 233 663-922 16-322 (359)
104 3hko_A Calcium/calmodulin-depe 100.0 1.8E-35 6.2E-40 331.2 18.6 229 668-919 25-297 (345)
105 3gen_A Tyrosine-protein kinase 100.0 6E-35 2E-39 317.5 22.2 227 663-921 18-246 (283)
106 1vzo_A Ribosomal protein S6 ki 100.0 2.3E-35 7.9E-40 332.3 19.5 232 665-924 50-292 (355)
107 1k9a_A Carboxyl-terminal SRC k 100.0 4.5E-35 1.5E-39 340.6 22.1 231 661-928 185-418 (450)
108 3bhy_A Death-associated protei 100.0 9.2E-35 3.1E-39 315.9 23.1 221 668-918 4-231 (283)
109 2qol_A Ephrin receptor; recept 100.0 3.4E-35 1.2E-39 333.2 20.5 233 663-922 39-276 (373)
110 1cm8_A Phosphorylated MAP kina 100.0 3.5E-35 1.2E-39 332.4 20.5 210 668-912 24-240 (367)
111 2wtk_C Serine/threonine-protei 100.0 5.4E-35 1.8E-39 321.3 21.3 232 668-925 4-240 (305)
112 2y7j_A Phosphorylase B kinase 100.0 5.6E-35 1.9E-39 330.4 22.0 220 669-918 94-325 (365)
113 2ac3_A MAP kinase-interacting 100.0 6.9E-35 2.4E-39 322.3 22.2 227 668-919 11-262 (316)
114 1mp8_A Focal adhesion kinase 1 100.0 5.8E-35 2E-39 317.6 21.1 230 665-924 11-245 (281)
115 4fvq_A Tyrosine-protein kinase 100.0 6.6E-35 2.3E-39 318.0 21.6 226 665-926 4-246 (289)
116 1rjb_A FL cytokine receptor; k 100.0 4.2E-35 1.4E-39 328.2 20.4 226 663-915 39-292 (344)
117 3lm5_A Serine/threonine-protei 100.0 5.3E-35 1.8E-39 325.5 21.0 225 668-921 27-256 (327)
118 1qcf_A Haematopoetic cell kina 100.0 4.9E-35 1.7E-39 340.7 21.6 233 662-926 181-415 (454)
119 3dtc_A Mitogen-activated prote 100.0 1E-34 3.5E-39 313.4 22.6 219 666-918 4-234 (271)
120 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3.6E-35 1.2E-39 327.1 19.4 217 665-912 30-252 (329)
121 1opk_A P150, C-ABL, proto-onco 100.0 2.9E-35 1E-39 346.2 19.4 234 663-926 214-449 (495)
122 3qup_A Tyrosine-protein kinase 100.0 4.5E-35 1.6E-39 325.0 19.8 233 665-923 19-266 (323)
123 1t46_A HOMO sapiens V-KIT hard 100.0 7.8E-35 2.7E-39 321.1 21.6 226 663-915 17-265 (313)
124 3is5_A Calcium-dependent prote 100.0 1.2E-34 4E-39 316.0 22.5 222 668-920 21-247 (285)
125 3ugc_A Tyrosine-protein kinase 100.0 5.7E-35 1.9E-39 319.9 19.8 210 664-901 5-220 (295)
126 3sxs_A Cytoplasmic tyrosine-pr 100.0 8.4E-35 2.9E-39 313.7 20.8 219 665-915 4-223 (268)
127 2xrw_A Mitogen-activated prote 100.0 1.9E-34 6.3E-39 326.9 24.5 213 667-913 23-241 (371)
128 1p4o_A Insulin-like growth fac 100.0 6E-35 2E-39 323.7 19.9 235 662-923 18-267 (322)
129 3t9t_A Tyrosine-protein kinase 100.0 1.2E-34 4E-39 312.1 21.5 226 664-921 3-230 (267)
130 3kmu_A ILK, integrin-linked ki 100.0 1.3E-34 4.5E-39 312.0 21.9 223 665-922 6-237 (271)
131 3lb7_A RAF proto-oncogene seri 100.0 1.7E-34 5.8E-39 318.5 23.2 221 662-913 29-252 (307)
132 3poz_A Epidermal growth factor 100.0 5.9E-35 2E-39 325.1 19.7 229 665-922 11-245 (327)
133 3kex_A Receptor tyrosine-prote 100.0 3.3E-35 1.1E-39 326.8 17.5 233 664-925 8-246 (325)
134 3kvw_A DYRK2, dual specificity 100.0 1.9E-34 6.5E-39 333.2 24.3 212 666-912 94-313 (429)
135 2wqm_A Serine/threonine-protei 100.0 3.8E-34 1.3E-38 315.7 25.5 222 667-915 30-255 (310)
136 4aaa_A Cyclin-dependent kinase 100.0 1.8E-34 6.2E-39 321.6 23.0 216 667-912 23-239 (331)
137 2x7f_A TRAF2 and NCK-interacti 100.0 2.6E-34 8.9E-39 319.1 24.1 220 665-915 20-251 (326)
138 3mi9_A Cell division protein k 100.0 1.5E-34 5.2E-39 324.8 22.3 225 668-918 16-249 (351)
139 3dbq_A Dual specificity protei 100.0 3.2E-34 1.1E-38 321.3 24.9 226 666-922 6-247 (343)
140 2pvf_A Fibroblast growth facto 100.0 1.3E-34 4.5E-39 323.1 21.5 233 664-923 30-286 (334)
141 1u59_A Tyrosine-protein kinase 100.0 2.5E-34 8.5E-39 313.6 23.2 232 665-924 5-241 (287)
142 3mtl_A Cell division protein k 100.0 3.1E-35 1.1E-39 326.9 16.3 213 669-912 2-215 (324)
143 1phk_A Phosphorylase kinase; g 100.0 4E-34 1.4E-38 313.3 24.9 224 667-920 15-251 (298)
144 3eb0_A Putative uncharacterize 100.0 2.5E-34 8.6E-39 327.2 24.1 211 666-912 4-256 (383)
145 2zmd_A Dual specificity protei 100.0 3E-34 1E-38 327.4 24.5 225 666-921 53-293 (390)
146 1csn_A Casein kinase-1; phosph 100.0 1.3E-34 4.6E-39 316.9 20.7 221 665-912 6-235 (298)
147 2fst_X Mitogen-activated prote 100.0 8.4E-35 2.9E-39 329.1 19.6 210 668-912 28-244 (367)
148 2w5a_A Serine/threonine-protei 100.0 6.1E-35 2.1E-39 316.6 17.3 228 668-923 5-242 (279)
149 1mqb_A Ephrin type-A receptor 100.0 3.3E-34 1.1E-38 320.0 23.6 233 664-923 39-277 (333)
150 2yfx_A Tyrosine-protein kinase 100.0 1.1E-34 3.8E-39 322.6 19.2 232 664-922 25-271 (327)
151 3lzb_A Epidermal growth factor 100.0 1.3E-34 4.3E-39 322.5 19.5 229 665-922 11-245 (327)
152 3eqc_A Dual specificity mitoge 100.0 2.3E-34 7.8E-39 324.6 21.8 209 665-906 29-238 (360)
153 3dls_A PAS domain-containing s 100.0 3.8E-35 1.3E-39 327.8 15.3 203 668-900 23-232 (335)
154 1qpc_A LCK kinase; alpha beta 100.0 1.4E-34 4.8E-39 313.9 19.2 229 662-922 6-236 (279)
155 4f0f_A Serine/threonine-protei 100.0 3.8E-34 1.3E-38 311.9 22.5 225 665-922 15-256 (287)
156 2r3i_A Cell division protein k 100.0 2.5E-34 8.4E-39 315.1 21.2 216 668-912 2-218 (299)
157 1xbb_A Tyrosine-protein kinase 100.0 2.1E-34 7.3E-39 314.7 20.6 232 664-923 11-247 (291)
158 1t4h_A Serine/threonine-protei 100.0 7E-34 2.4E-38 310.4 24.5 217 665-914 22-246 (290)
159 2i1m_A Macrophage colony-stimu 100.0 1.4E-34 4.7E-39 322.5 18.9 225 664-915 41-284 (333)
160 1ua2_A CAK, cell division prot 100.0 1.6E-34 5.4E-39 324.2 19.5 216 668-912 9-227 (346)
161 3qd2_B Eukaryotic translation 100.0 2.3E-34 8E-39 319.7 20.7 214 668-898 5-276 (332)
162 3a7i_A MST3 kinase, serine/thr 100.0 6.6E-34 2.3E-38 312.6 24.0 222 668-921 21-243 (303)
163 1fvr_A Tyrosine-protein kinase 100.0 2.1E-34 7.2E-39 320.4 20.1 227 666-922 22-267 (327)
164 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.4E-34 4.6E-39 336.8 19.3 233 663-927 178-412 (452)
165 2yex_A Serine/threonine-protei 100.0 2.7E-34 9.2E-39 310.8 19.5 219 668-915 6-226 (276)
166 3qyz_A Mitogen-activated prote 100.0 5.1E-34 1.7E-38 322.4 22.6 215 668-912 26-246 (364)
167 3op5_A Serine/threonine-protei 100.0 1.3E-34 4.4E-39 327.3 17.6 214 666-901 32-264 (364)
168 1j1b_A Glycogen synthase kinas 100.0 5.4E-34 1.8E-38 328.5 22.9 209 668-912 53-271 (420)
169 1byg_A CSK, protein (C-termina 100.0 1E-34 3.4E-39 315.1 15.8 227 660-923 12-241 (278)
170 3i6u_A CDS1, serine/threonine- 100.0 1.9E-34 6.6E-39 332.1 18.7 220 668-918 134-365 (419)
171 3n9x_A Phosphotransferase; mal 100.0 6.5E-34 2.2E-38 329.1 23.2 218 668-894 25-248 (432)
172 1z57_A Dual specificity protei 100.0 8E-34 2.7E-38 316.1 22.9 213 666-913 11-249 (339)
173 3byv_A Rhoptry kinase; malaria 100.0 1.3E-35 4.4E-40 337.2 8.3 205 668-904 72-319 (377)
174 4eut_A Serine/threonine-protei 100.0 1.6E-34 5.6E-39 330.3 17.5 220 666-915 6-244 (396)
175 2pml_X PFPK7, Ser/Thr protein 100.0 1.6E-34 5.6E-39 323.8 17.1 223 666-919 28-274 (348)
176 3brb_A Proto-oncogene tyrosine 100.0 6.6E-34 2.2E-38 314.2 21.6 233 665-923 30-276 (313)
177 3cc6_A Protein tyrosine kinase 100.0 5.5E-34 1.9E-38 309.7 20.5 228 665-922 8-240 (281)
178 3nsz_A CK II alpha, casein kin 100.0 2.3E-33 7.8E-38 312.1 25.9 196 666-900 33-233 (330)
179 3p1a_A MYT1 kinase, membrane-a 100.0 5.3E-34 1.8E-38 315.1 20.5 201 668-900 56-257 (311)
180 2xir_A Vascular endothelial gr 100.0 2.8E-34 9.7E-39 317.1 18.3 233 663-922 21-277 (316)
181 3fme_A Dual specificity mitoge 100.0 9.6E-34 3.3E-38 308.8 22.1 224 665-918 3-235 (290)
182 4exu_A Mitogen-activated prote 100.0 7E-34 2.4E-38 322.2 21.8 209 668-912 41-256 (371)
183 3og7_A AKAP9-BRAF fusion prote 100.0 7.3E-34 2.5E-38 310.3 21.0 223 662-915 17-243 (289)
184 3soc_A Activin receptor type-2 100.0 3.2E-34 1.1E-38 318.5 18.3 206 662-901 17-241 (322)
185 1x8b_A WEE1HU, WEE1-like prote 100.0 8.6E-34 3E-38 308.2 21.2 220 668-922 10-253 (289)
186 2wei_A Calmodulin-domain prote 100.0 1.1E-33 3.6E-38 308.6 21.8 219 668-918 21-242 (287)
187 1u46_A ACK-1, activated CDC42 100.0 3.5E-34 1.2E-38 312.5 17.9 230 665-920 14-247 (291)
188 2j7t_A Serine/threonine-protei 100.0 5.6E-34 1.9E-38 312.8 19.6 218 667-915 17-239 (302)
189 2ozo_A Tyrosine-protein kinase 100.0 9.5E-34 3.3E-38 341.4 23.3 235 666-928 332-571 (613)
190 2h8h_A Proto-oncogene tyrosine 100.0 3.5E-34 1.2E-38 340.1 18.5 233 663-927 261-495 (535)
191 2qkw_B Protein kinase; three-h 100.0 4.4E-34 1.5E-38 316.9 18.1 208 666-902 36-245 (321)
192 3com_A Serine/threonine-protei 100.0 2E-33 6.8E-38 310.3 23.2 215 666-913 26-240 (314)
193 1blx_A Cyclin-dependent kinase 100.0 1.7E-33 5.7E-38 312.5 22.4 216 667-912 9-233 (326)
194 1wak_A Serine/threonine-protei 100.0 9.6E-34 3.3E-38 323.0 21.0 201 667-902 35-297 (397)
195 3an0_A Dual specificity mitoge 100.0 1.6E-33 5.3E-38 315.1 22.2 220 663-913 45-273 (340)
196 3f66_A Hepatocyte growth facto 100.0 1.9E-33 6.5E-38 308.1 22.4 230 667-922 23-258 (298)
197 2ycf_A Serine/threonine-protei 100.0 4.9E-34 1.7E-38 316.7 17.5 219 668-917 9-239 (322)
198 4e5w_A Tyrosine-protein kinase 100.0 1.4E-33 4.8E-38 309.5 20.8 207 666-899 18-230 (302)
199 2i6l_A Mitogen-activated prote 100.0 3.1E-33 1.1E-37 308.9 23.6 216 667-913 9-240 (320)
200 2vwi_A Serine/threonine-protei 100.0 3.3E-34 1.1E-38 314.4 15.6 227 664-914 10-243 (303)
201 4fl3_A Tyrosine-protein kinase 100.0 1.3E-33 4.5E-38 341.1 22.3 225 675-927 375-603 (635)
202 2jii_A Serine/threonine-protei 100.0 5.7E-34 2E-38 320.4 17.7 205 668-901 41-271 (352)
203 3pls_A Macrophage-stimulating 100.0 5.1E-33 1.8E-37 304.3 24.7 228 669-922 21-254 (298)
204 3lxl_A Tyrosine-protein kinase 100.0 1.1E-33 3.8E-38 314.6 19.6 211 663-901 17-233 (327)
205 2eu9_A Dual specificity protei 100.0 2.7E-33 9.3E-38 314.1 22.5 217 667-918 17-259 (355)
206 2vx3_A Dual specificity tyrosi 100.0 2.5E-33 8.5E-38 318.9 22.3 212 667-913 52-273 (382)
207 3uzp_A CKI-delta, CKID, casein 100.0 2.2E-33 7.5E-38 306.9 20.9 207 667-900 7-217 (296)
208 3q60_A ROP5B; pseudokinase, tr 100.0 3E-34 1E-38 325.1 14.4 202 668-901 61-296 (371)
209 2b9h_A MAP kinase FUS3, mitoge 100.0 3.5E-33 1.2E-37 313.6 22.4 222 668-912 10-237 (353)
210 3coi_A Mitogen-activated prote 100.0 2E-33 7E-38 316.0 20.4 209 668-912 23-238 (353)
211 4hgt_A Casein kinase I isoform 100.0 1.4E-33 4.7E-38 308.4 18.0 207 668-901 8-218 (296)
212 4e7w_A Glycogen synthase kinas 100.0 2.3E-33 7.8E-38 320.6 20.6 210 667-912 38-256 (394)
213 3pg1_A Mitogen-activated prote 100.0 4.4E-33 1.5E-37 314.2 22.0 215 667-912 20-248 (362)
214 3uim_A Brassinosteroid insensi 100.0 6.8E-34 2.3E-38 315.9 15.0 206 665-899 26-236 (326)
215 2eva_A TAK1 kinase - TAB1 chim 100.0 4.6E-33 1.6E-37 307.0 21.1 218 666-922 5-230 (307)
216 3c1x_A Hepatocyte growth facto 100.0 1.4E-33 4.9E-38 319.7 17.5 229 669-923 89-323 (373)
217 2v62_A Serine/threonine-protei 100.0 7.5E-34 2.6E-38 318.6 15.0 212 666-900 34-262 (345)
218 3e3p_A Protein kinase, putativ 100.0 5.2E-33 1.8E-37 313.1 21.6 214 666-912 20-246 (360)
219 1q8y_A SR protein kinase; tran 100.0 2.9E-33 9.8E-38 316.6 19.6 205 663-902 13-239 (373)
220 2buj_A Serine/threonine-protei 100.0 1E-33 3.5E-38 313.1 15.2 215 665-900 25-248 (317)
221 1zy4_A Serine/threonine-protei 100.0 7.2E-33 2.5E-37 303.3 21.8 234 669-923 6-254 (303)
222 2a19_B Interferon-induced, dou 100.0 2.9E-33 9.9E-38 303.9 18.4 197 668-899 10-222 (284)
223 3ll6_A Cyclin G-associated kin 100.0 4.1E-33 1.4E-37 310.3 19.9 222 664-904 23-259 (337)
224 3lxp_A Non-receptor tyrosine-p 100.0 3.5E-33 1.2E-37 309.4 19.1 207 666-901 28-240 (318)
225 3q4u_A Activin receptor type-1 100.0 4.6E-33 1.6E-37 305.1 19.5 201 666-900 5-235 (301)
226 3fhr_A MAP kinase-activated pr 100.0 3.8E-33 1.3E-37 311.8 19.0 216 667-918 26-253 (336)
227 2clq_A Mitogen-activated prote 100.0 8.6E-33 2.9E-37 302.1 21.4 206 666-901 19-228 (295)
228 3rgf_A Cyclin-dependent kinase 100.0 4.5E-33 1.5E-37 319.4 19.2 206 668-903 19-241 (405)
229 3sv0_A Casein kinase I-like; t 100.0 1.3E-32 4.5E-37 321.3 23.4 208 667-901 5-216 (483)
230 3a99_A Proto-oncogene serine/t 100.0 2.5E-33 8.5E-38 311.0 15.8 206 665-901 39-252 (320)
231 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.4E-33 8.2E-38 310.2 15.5 227 662-916 26-261 (319)
232 3cek_A Dual specificity protei 100.0 3.3E-32 1.1E-36 300.6 23.9 229 662-921 21-265 (313)
233 3ewk_A Sensor protein; PAS dom 100.0 4.1E-31 1.4E-35 277.9 30.7 220 202-585 2-227 (227)
234 2nru_A Interleukin-1 receptor- 100.0 7.7E-33 2.6E-37 304.6 17.8 205 670-902 32-238 (307)
235 2j0j_A Focal adhesion kinase 1 100.0 2.6E-32 9E-37 330.9 23.8 232 665-926 386-622 (656)
236 2iwi_A Serine/threonine-protei 100.0 3.1E-33 1.1E-37 308.6 13.9 204 666-900 28-241 (312)
237 2dyl_A Dual specificity mitoge 100.0 4.2E-32 1.4E-36 299.9 22.1 224 665-919 21-252 (318)
238 2w1i_A JAK2; chromosomal rearr 100.0 2.2E-32 7.5E-37 304.0 19.6 209 664-900 36-250 (326)
239 3aln_A Dual specificity mitoge 100.0 4.2E-32 1.4E-36 301.8 21.1 209 663-902 16-233 (327)
240 3mdy_A Bone morphogenetic prot 100.0 5.1E-32 1.7E-36 301.8 20.7 199 668-900 36-264 (337)
241 3uqc_A Probable conserved tran 100.0 6.2E-32 2.1E-36 294.9 20.0 184 661-902 23-206 (286)
242 3g2f_A Bone morphogenetic prot 100.0 1.5E-32 5.2E-37 306.2 15.4 206 664-899 8-236 (336)
243 1b6c_B TGF-B superfamily recep 100.0 1.3E-31 4.6E-36 299.2 19.4 213 668-914 41-288 (342)
244 2vuw_A Serine/threonine-protei 100.0 3.2E-33 1.1E-37 312.2 5.4 197 666-900 17-279 (336)
245 2rio_A Serine/threonine-protei 100.0 2.2E-31 7.5E-36 308.0 20.6 220 668-920 14-260 (434)
246 3gxj_A TGF-beta receptor type- 100.0 2.8E-33 9.6E-38 307.0 3.4 198 669-900 3-230 (303)
247 3p23_A Serine/threonine-protei 100.0 2.7E-31 9.1E-36 306.8 16.9 206 666-904 21-236 (432)
248 3qa8_A MGC80376 protein; kinas 100.0 1.2E-31 4.1E-36 320.3 14.3 205 668-902 13-227 (676)
249 2pzi_A Probable serine/threoni 100.0 2.1E-31 7.1E-36 325.6 16.5 196 666-900 77-278 (681)
250 3m2w_A MAP kinase-activated pr 100.0 5.9E-31 2E-35 288.8 18.3 180 668-904 16-204 (299)
251 3dzo_A Rhoptry kinase domain; 100.0 9.9E-32 3.4E-36 308.9 10.5 213 668-912 77-331 (413)
252 4azs_A Methyltransferase WBDD; 100.0 1.3E-29 4.6E-34 301.8 7.1 187 675-894 240-434 (569)
253 3en9_A Glycoprotease, O-sialog 99.9 5.7E-25 2E-29 260.4 6.2 194 672-899 339-539 (540)
254 1zar_A RIO2 kinase; serine kin 99.9 1.6E-22 5.4E-27 219.8 11.0 136 669-819 90-240 (282)
255 4f3l_A Mclock, circadian locom 99.8 2.9E-19 1E-23 200.9 16.2 107 482-591 251-358 (361)
256 4f3l_B BMAL1B; BHLH, PAS, circ 99.8 7.7E-19 2.6E-23 199.1 15.5 108 481-591 277-386 (387)
257 2gj3_A Nitrogen fixation regul 99.8 4.5E-18 1.5E-22 158.6 16.0 119 186-307 2-120 (120)
258 1zth_A RIO1 serine protein kin 99.8 9.4E-19 3.2E-23 187.5 9.5 140 670-820 48-218 (258)
259 3ewk_A Sensor protein; PAS dom 99.7 1.3E-17 4.3E-22 174.7 15.9 162 127-302 60-227 (227)
260 2pr5_A Blue-light photorecepto 99.7 2E-17 6.7E-22 157.0 15.6 122 192-315 2-123 (132)
261 1n9l_A PHOT-LOV1, putative blu 99.7 2.2E-17 7.5E-22 151.6 15.4 109 197-305 1-109 (109)
262 2gj3_A Nitrogen fixation regul 99.7 2.7E-17 9.2E-22 153.3 15.8 115 473-590 6-120 (120)
263 3ue6_A Aureochrome1; PAS/LOV d 99.7 8.5E-17 2.9E-21 157.8 16.6 141 174-314 20-160 (166)
264 3p7n_A Sensor histidine kinase 99.7 5.6E-17 1.9E-21 173.1 16.0 136 175-310 49-184 (258)
265 4hia_A LOV protein; PAS, HTH, 99.7 1.1E-16 3.9E-21 159.3 16.4 128 187-314 5-132 (176)
266 2pr5_A Blue-light photorecepto 99.7 1.7E-16 5.7E-21 150.5 15.1 117 475-593 2-118 (132)
267 1n9l_A PHOT-LOV1, putative blu 99.7 3.1E-16 1.1E-20 143.9 15.6 108 481-588 2-109 (109)
268 4hia_A LOV protein; PAS, HTH, 99.7 3.4E-16 1.1E-20 155.9 15.6 120 473-595 8-130 (176)
269 3mr0_A Sensory box histidine k 99.7 4.1E-16 1.4E-20 150.2 15.1 131 182-315 2-134 (142)
270 3rty_A Period circadian protei 99.7 5.5E-16 1.9E-20 171.2 18.0 107 482-591 154-266 (339)
271 3p7n_A Sensor histidine kinase 99.7 3.9E-16 1.3E-20 166.6 14.3 132 457-591 47-182 (258)
272 3t50_A Blue-light-activated hi 99.7 6.8E-16 2.3E-20 144.3 13.9 122 194-315 2-123 (128)
273 3f1p_B ARYL hydrocarbon recept 99.7 2.4E-16 8.2E-21 146.8 10.7 115 474-591 4-120 (121)
274 3f1p_B ARYL hydrocarbon recept 99.7 2.2E-16 7.7E-21 146.9 9.9 116 190-308 3-120 (121)
275 3ue6_A Aureochrome1; PAS/LOV d 99.6 7.7E-16 2.6E-20 150.9 13.1 129 461-592 23-155 (166)
276 3mr0_A Sensory box histidine k 99.6 3.3E-15 1.1E-19 143.8 15.7 120 471-593 8-129 (142)
277 1d06_A Nitrogen fixation regul 99.6 5.2E-16 1.8E-20 146.7 9.5 125 175-304 2-130 (130)
278 3f1p_A Endothelial PAS domain- 99.6 7.1E-16 2.4E-20 142.5 10.1 109 480-591 7-116 (117)
279 3sw1_A Sensory box protein; li 99.6 4.2E-15 1.4E-19 145.2 16.0 131 186-319 22-155 (162)
280 4eet_B Phototropin-2; LOV, blu 99.6 6.9E-15 2.4E-19 133.6 15.3 114 194-307 2-115 (115)
281 3t50_A Blue-light-activated hi 99.6 2.7E-15 9.3E-20 140.1 12.9 117 477-596 2-121 (128)
282 4gyi_A RIO2 kinase; protein ki 99.6 5.7E-16 1.9E-20 173.0 9.2 141 670-821 96-265 (397)
283 2r78_A Sensor protein; sensory 99.6 6E-15 2.1E-19 137.0 14.7 114 182-304 4-117 (117)
284 3f1p_A Endothelial PAS domain- 99.6 8.7E-16 3E-20 141.9 8.6 108 198-308 8-116 (117)
285 4eet_B Phototropin-2; LOV, blu 99.6 1.1E-14 3.8E-19 132.3 15.7 111 477-590 2-115 (115)
286 3nja_A Probable ggdef family p 99.6 2.4E-15 8.4E-20 138.9 11.3 123 183-308 1-125 (125)
287 1d06_A Nitrogen fixation regul 99.6 5.5E-15 1.9E-19 139.6 13.6 124 459-587 2-130 (130)
288 3mqq_A Transcriptional regulat 99.6 1.6E-15 5.3E-20 141.0 9.4 115 190-309 4-119 (120)
289 2z6d_A Phototropin-2; PAS-fold 99.6 1.7E-14 5.8E-19 132.6 16.0 127 186-312 3-129 (130)
290 3mqq_A Transcriptional regulat 99.6 2E-15 6.8E-20 140.3 9.4 115 472-591 3-118 (120)
291 2vv6_A FIXL, sensor protein FI 99.6 5.9E-15 2E-19 136.9 11.7 113 197-314 1-117 (119)
292 3lyx_A Sensory BOX/ggdef domai 99.6 1.8E-14 6.3E-19 131.4 14.8 120 186-308 4-123 (124)
293 3k3c_A Protein RV1364C/MT1410; 99.6 2.2E-15 7.7E-20 146.9 9.2 125 185-314 13-143 (158)
294 3nja_A Probable ggdef family p 99.6 8.6E-15 2.9E-19 135.1 11.5 117 472-591 7-125 (125)
295 2v0u_A NPH1-1, LOV2; kinase, t 99.6 3.2E-14 1.1E-18 134.1 15.7 139 474-622 4-145 (146)
296 2r78_A Sensor protein; sensory 99.6 4.2E-14 1.4E-18 131.2 14.9 107 472-587 11-117 (117)
297 2z6d_A Phototropin-2; PAS-fold 99.6 9.9E-14 3.4E-18 127.4 16.8 119 472-593 6-127 (130)
298 3bwl_A Sensor protein; structu 99.5 1.4E-14 4.7E-19 135.3 10.8 124 173-304 1-126 (126)
299 2wkq_A NPH1-1, RAS-related C3 99.5 3.4E-14 1.2E-18 157.4 14.8 122 193-314 15-136 (332)
300 3lyx_A Sensory BOX/ggdef domai 99.5 6.1E-14 2.1E-18 127.9 14.0 116 473-591 8-123 (124)
301 2vv6_A FIXL, sensor protein FI 99.5 2.4E-14 8.3E-19 132.7 11.4 110 481-595 2-115 (119)
302 3mxq_A Sensor protein; PSI2, M 99.5 7.9E-15 2.7E-19 143.4 8.2 124 183-310 16-151 (152)
303 2wkq_A NPH1-1, RAS-related C3 99.5 5.1E-14 1.7E-18 156.0 15.4 117 475-594 14-133 (332)
304 3luq_A Sensor protein; PAS, hi 99.5 7.4E-14 2.5E-18 126.7 13.4 112 188-304 2-114 (114)
305 3h9w_A Diguanylate cyclase wit 99.5 1.8E-14 6.2E-19 132.6 9.1 110 481-593 2-113 (115)
306 3h9w_A Diguanylate cyclase wit 99.5 2.2E-14 7.4E-19 132.1 9.5 112 198-311 2-114 (115)
307 3kx0_X Uncharacterized protein 99.5 3E-14 1E-18 143.8 11.3 124 185-313 33-162 (185)
308 3k3c_A Protein RV1364C/MT1410; 99.5 3.9E-14 1.3E-18 138.0 10.3 121 468-593 13-139 (158)
309 3sw1_A Sensory box protein; li 99.5 7.6E-14 2.6E-18 136.1 12.2 118 472-592 25-145 (162)
310 3bwl_A Sensor protein; structu 99.5 1.6E-13 5.4E-18 128.0 13.4 123 457-587 1-126 (126)
311 3eeh_A Putative light and redo 99.5 6.5E-14 2.2E-18 128.3 10.2 121 180-304 2-125 (125)
312 3luq_A Sensor protein; PAS, hi 99.5 2.1E-13 7.2E-18 123.6 13.2 111 473-587 4-114 (114)
313 4dj3_A Period circadian protei 99.5 2E-12 6.8E-17 141.3 22.8 106 483-591 175-284 (317)
314 3mxq_A Sensor protein; PSI2, M 99.5 3.6E-14 1.2E-18 138.7 8.0 122 466-591 15-149 (152)
315 3kx0_X Uncharacterized protein 99.5 7.9E-14 2.7E-18 140.7 10.3 141 468-615 33-179 (185)
316 2v0u_A NPH1-1, LOV2; kinase, t 99.5 5.1E-13 1.7E-17 125.7 15.1 121 191-311 4-124 (146)
317 2kdk_A ARYL hydrocarbon recept 99.5 2.7E-13 9.2E-18 125.5 12.8 114 475-591 6-121 (121)
318 1byw_A Protein (human ERG pota 99.5 9E-13 3.1E-17 117.2 15.5 107 200-306 2-110 (110)
319 3icy_A Sensor protein; sensory 99.5 9.6E-14 3.3E-18 127.1 8.6 115 187-304 2-118 (118)
320 3olo_A Two-component sensor hi 99.5 2.5E-13 8.5E-18 124.3 11.3 114 181-304 5-118 (118)
321 3icy_A Sensor protein; sensory 99.4 9.3E-14 3.2E-18 127.2 7.8 113 472-587 4-118 (118)
322 2kdk_A ARYL hydrocarbon recept 99.4 2.7E-13 9.4E-18 125.4 10.8 111 194-307 8-120 (121)
323 3d72_A Vivid PAS protein VVD; 99.4 5.1E-13 1.8E-17 128.5 13.0 127 167-302 12-149 (149)
324 2l0w_A Potassium voltage-gated 99.4 2E-12 6.8E-17 120.5 16.6 118 189-306 19-138 (138)
325 1v9y_A Heme PAS sensor protein 99.4 2.5E-13 8.6E-18 132.4 10.1 139 171-314 22-164 (167)
326 3eeh_A Putative light and redo 99.4 3.1E-13 1.1E-17 123.7 9.7 112 472-587 11-125 (125)
327 3mjq_A Uncharacterized protein 99.4 4.3E-13 1.5E-17 124.1 9.1 117 192-314 2-118 (126)
328 4dj2_A Period circadian protei 99.4 2.2E-12 7.6E-17 141.1 14.8 107 482-591 176-285 (320)
329 3olo_A Two-component sensor hi 99.4 1.6E-12 5.4E-17 118.9 11.6 104 474-587 15-118 (118)
330 3gdi_A Period circadian protei 99.4 2.8E-12 9.5E-17 139.7 15.2 106 483-591 166-274 (309)
331 3mjq_A Uncharacterized protein 99.4 6.4E-13 2.2E-17 122.9 8.6 116 475-596 2-117 (126)
332 1byw_A Protein (human ERG pota 99.4 6.6E-12 2.3E-16 111.5 14.3 107 483-589 2-110 (110)
333 4eho_A Bacteriophytochrome, PA 99.4 3.5E-13 1.2E-17 162.1 6.8 118 472-593 518-635 (635)
334 2l0w_A Potassium voltage-gated 99.4 7.1E-12 2.4E-16 116.7 13.9 113 474-589 21-138 (138)
335 1v9y_A Heme PAS sensor protein 99.4 2.6E-12 8.8E-17 125.2 11.2 136 455-595 22-162 (167)
336 3mfx_A Sensory BOX/ggdef famil 99.3 2.5E-12 8.6E-17 122.0 10.5 112 188-305 6-124 (129)
337 3d72_A Vivid PAS protein VVD; 99.3 4E-12 1.4E-16 122.1 11.6 108 474-585 28-149 (149)
338 3vol_A Aerotaxis transducer AE 99.3 8E-12 2.7E-16 131.3 14.0 117 185-314 18-146 (233)
339 3mfx_A Sensory BOX/ggdef famil 99.3 4.4E-12 1.5E-16 120.3 10.1 110 474-589 9-125 (129)
340 4eho_A Bacteriophytochrome, PA 99.3 1.9E-13 6.5E-18 164.5 0.6 118 189-310 518-635 (635)
341 4hi4_A Aerotaxis transducer AE 99.2 5.7E-11 2E-15 110.6 12.8 106 188-306 4-121 (121)
342 3fc7_A HTR-like protein, senso 99.2 5.5E-12 1.9E-16 116.7 5.7 108 187-304 17-125 (125)
343 3tm0_A Aminoglycoside 3'-phosp 99.2 2.4E-11 8.2E-16 129.7 11.1 139 669-819 14-212 (263)
344 2qkp_A Uncharacterized protein 99.2 2.6E-11 8.8E-16 118.3 10.1 122 188-315 18-142 (151)
345 4f3l_A Mclock, circadian locom 99.2 1.5E-11 5E-16 138.1 8.5 108 200-310 252-360 (361)
346 3fc7_A HTR-like protein, senso 99.2 1.2E-11 4.1E-16 114.4 5.9 108 470-587 17-125 (125)
347 2vlg_A Sporulation kinase A; h 99.2 2.4E-11 8.1E-16 112.0 7.3 94 193-292 3-96 (111)
348 3vol_A Aerotaxis transducer AE 99.2 9E-11 3.1E-15 123.3 12.3 107 473-592 23-141 (233)
349 4hi4_A Aerotaxis transducer AE 99.2 1.6E-10 5.3E-15 107.6 12.3 104 473-589 6-121 (121)
350 3fg8_A Uncharacterized protein 99.2 9.9E-12 3.4E-16 115.2 3.9 111 185-306 8-118 (118)
351 3b33_A Sensor protein; structu 99.2 1E-10 3.6E-15 106.9 10.4 107 190-304 8-115 (115)
352 2vlg_A Sporulation kinase A; h 99.1 4.1E-11 1.4E-15 110.4 7.0 93 476-574 3-95 (111)
353 3fg8_A Uncharacterized protein 99.1 1.9E-11 6.6E-16 113.2 4.6 107 472-589 12-118 (118)
354 2qkp_A Uncharacterized protein 99.1 1.4E-10 4.9E-15 113.0 10.3 117 474-596 21-140 (151)
355 4f3l_B BMAL1B; BHLH, PAS, circ 99.1 8.9E-11 3.1E-15 132.8 9.0 108 198-308 277-386 (387)
356 3b33_A Sensor protein; structu 99.1 2.7E-10 9.1E-15 104.1 10.3 106 474-587 9-115 (115)
357 1ll8_A PAS kinase; PAS domain, 99.1 6.6E-11 2.3E-15 108.4 3.9 102 197-304 6-113 (114)
358 1ll8_A PAS kinase; PAS domain, 99.0 1E-10 3.4E-15 107.2 3.5 103 480-588 6-114 (114)
359 3a0r_A Sensor protein; four he 99.0 3.2E-10 1.1E-14 126.0 8.2 136 473-618 9-145 (349)
360 1nd4_A Aminoglycoside 3'-phosp 99.0 6.9E-10 2.4E-14 117.7 9.1 134 669-819 20-213 (264)
361 2w0n_A Sensor protein DCUS; si 99.0 1.6E-10 5.4E-15 105.2 2.9 109 181-304 7-118 (118)
362 3cax_A Uncharacterized protein 99.0 9.3E-10 3.2E-14 123.6 9.5 122 184-314 234-355 (369)
363 3a0r_A Sensor protein; four he 99.0 4.2E-10 1.4E-14 125.0 6.4 121 184-314 3-124 (349)
364 3dxp_A Putative acyl-COA dehyd 99.0 9.7E-10 3.3E-14 123.1 9.1 142 671-820 40-248 (359)
365 3a0s_A Sensor protein; PAS-fol 98.9 8.5E-09 2.9E-13 88.8 12.2 95 198-302 1-96 (96)
366 2ykf_A Pdtas, probable sensor 98.4 2.4E-10 8.1E-15 124.8 0.0 112 475-596 173-293 (305)
367 3cax_A Uncharacterized protein 98.9 4.9E-09 1.7E-13 117.7 10.1 115 473-596 240-354 (369)
368 3a0s_A Sensor protein; PAS-fol 98.8 2E-08 6.9E-13 86.4 11.8 95 481-585 1-96 (96)
369 1nwz_A PYP, photoactive yellow 98.8 2.1E-08 7.3E-13 93.1 12.1 100 192-297 20-121 (125)
370 2w0n_A Sensor protein DCUS; si 98.8 7.7E-10 2.6E-14 100.6 2.3 101 472-587 15-118 (118)
371 1mzu_A PPR; photoactive yellow 98.8 2.1E-08 7.2E-13 93.3 11.5 99 193-297 26-126 (129)
372 3sg8_A APH(2'')-ID; antibiotic 98.8 3.9E-09 1.3E-13 115.3 7.6 198 674-900 25-289 (304)
373 2jhe_A Transcription regulator 98.8 5.7E-09 1.9E-13 105.1 6.8 108 185-307 76-189 (190)
374 3rty_A Period circadian protei 98.8 1.2E-08 4.2E-13 112.4 9.9 106 199-307 154-265 (339)
375 2ykf_A Pdtas, probable sensor 98.3 7.5E-10 2.6E-14 120.8 0.0 181 120-315 84-295 (305)
376 1nwz_A PYP, photoactive yellow 98.7 7.9E-08 2.7E-12 89.2 11.7 99 475-579 20-120 (125)
377 2jhe_A Transcription regulator 98.7 1.3E-08 4.3E-13 102.6 6.3 104 473-591 81-190 (190)
378 1mzu_A PPR; photoactive yellow 98.7 1E-07 3.5E-12 88.6 11.4 99 475-579 25-125 (129)
379 4dj3_A Period circadian protei 98.6 1.3E-07 4.4E-12 103.2 12.4 98 208-305 180-281 (317)
380 3r70_A Aminoglycoside phosphot 98.6 1.6E-07 5.3E-12 103.4 12.5 133 670-820 38-237 (320)
381 3gdi_A Period circadian protei 98.6 2.4E-07 8.1E-12 100.8 12.0 98 209-306 172-272 (309)
382 4dj2_A Period circadian protei 98.5 1.9E-07 6.4E-12 102.1 9.7 99 208-306 182-283 (320)
383 3tdw_A Gentamicin resistance p 98.4 2E-06 6.8E-11 93.9 13.5 133 674-820 24-224 (306)
384 4gkh_A Aminoglycoside 3'-phosp 98.4 2.5E-06 8.4E-11 91.0 13.7 131 678-820 33-223 (272)
385 3ovc_A Hygromycin-B 4-O-kinase 98.2 5E-06 1.7E-10 92.9 11.4 77 671-757 43-122 (362)
386 2olc_A MTR kinase, methylthior 98.0 1.5E-05 5.1E-10 90.2 9.5 80 673-754 34-120 (397)
387 3d1u_A Putative fructosamine-3 97.9 1.8E-05 6.2E-10 85.3 8.4 77 672-756 18-97 (288)
388 2q83_A YTAA protein; 2635576, 97.9 0.00012 4.2E-09 80.4 14.4 138 674-820 37-252 (346)
389 3ats_A Putative uncharacterize 97.8 4.3E-05 1.5E-09 84.9 10.3 85 673-757 24-121 (357)
390 3jr1_A Putative fructosamine-3 97.5 0.00051 1.7E-08 74.8 12.9 76 673-756 40-118 (312)
391 2pyw_A Uncharacterized protein 97.3 0.00059 2E-08 77.6 10.9 77 673-753 38-122 (420)
392 1oj5_A Steroid receptor coacti 97.2 0.00033 1.1E-08 64.7 5.5 97 208-305 13-114 (132)
393 3dxq_A Choline/ethanolamine ki 97.2 0.00039 1.3E-08 75.2 6.4 135 673-820 22-202 (301)
394 3feg_A Choline/ethanolamine ki 96.9 0.00099 3.4E-08 74.5 7.3 138 675-820 56-254 (379)
395 3csv_A Aminoglycoside phosphot 96.9 0.0017 5.9E-08 71.1 9.0 137 675-820 24-217 (333)
396 2ppq_A HSK, HK, homoserine kin 96.9 0.0023 7.8E-08 69.6 9.8 142 672-820 25-217 (322)
397 1nw1_A Choline kinase (49.2 KD 96.8 0.0022 7.6E-08 73.0 9.0 74 674-756 78-159 (429)
398 3f7w_A Putative fructosamine-3 96.8 0.0028 9.7E-08 67.9 8.8 81 668-756 14-97 (288)
399 3c5i_A Choline kinase; choline 96.6 0.0025 8.6E-08 70.9 7.2 75 674-756 38-121 (369)
400 1oj5_A Steroid receptor coacti 96.6 0.0019 6.5E-08 59.6 4.9 103 482-588 7-114 (132)
401 1zyl_A Hypothetical protein YI 96.6 0.0084 2.9E-07 65.2 11.2 138 675-820 32-223 (328)
402 3i1a_A Spectinomycin phosphotr 96.5 0.0094 3.2E-07 65.5 11.2 31 790-820 206-236 (339)
403 2qg7_A Ethanolamine kinase PV0 96.4 0.011 3.6E-07 67.9 10.9 75 674-756 113-188 (458)
404 3f2s_A CK, chetk-alpha, cholin 96.0 0.015 5.1E-07 65.2 9.4 143 674-820 57-280 (401)
405 3mes_A Choline kinase; malaria 95.2 0.019 6.3E-07 65.1 6.2 75 674-756 75-157 (424)
406 2yle_A Protein spire homolog 1 95.1 0.067 2.3E-06 54.1 9.1 116 754-911 33-154 (229)
407 3g15_A CK, chetk-alpha, cholin 93.3 0.17 5.9E-06 56.7 8.7 29 792-820 246-280 (401)
408 2ool_A Sensor protein; bacteri 83.7 1.4 4.8E-05 47.8 6.5 77 200-282 42-123 (337)
409 2ool_A Sensor protein; bacteri 82.5 0.73 2.5E-05 50.0 3.6 78 483-566 43-124 (337)
410 4ann_A ESSB; membrane protein, 81.3 2.4 8.2E-05 42.7 6.6 83 727-818 43-126 (215)
411 4ano_A ESSB; membrane protein, 79.6 2.2 7.7E-05 43.0 5.8 83 727-818 48-131 (219)
412 1p0z_A Sensor kinase CITA; tra 74.5 22 0.00076 32.2 10.8 89 188-305 38-127 (131)
413 4dah_A Sporulation kinase D; a 74.4 14 0.00047 36.6 10.1 98 186-308 55-154 (217)
414 4ew7_A Conjugative transfer: r 65.7 22 0.00077 30.7 7.6 91 474-571 22-112 (127)
415 2x6h_A GH13170P, VPS34, phosph 62.4 41 0.0014 39.9 11.9 82 732-818 476-574 (696)
416 3by8_A Sensor protein DCUS; hi 58.2 44 0.0015 30.7 9.3 91 187-307 43-134 (142)
417 3ls8_A Phosphatidylinositol 3- 55.4 1.5E+02 0.005 34.6 14.8 82 732-818 402-500 (614)
418 3lif_A Putative diguanylate cy 50.4 79 0.0027 31.6 10.7 96 186-306 55-154 (254)
419 3cxl_A N-chimerin; SH2, RHO-GA 49.7 1.9 6.4E-05 49.2 -2.2 64 672-739 145-214 (463)
420 1p0z_A Sensor kinase CITA; tra 48.8 48 0.0017 29.9 7.8 77 483-588 51-127 (131)
421 4e04_A Bacteriophytochrome (li 47.5 30 0.001 37.0 6.9 54 201-261 31-84 (327)
422 4ew7_A Conjugative transfer: r 47.5 19 0.00064 31.1 4.1 44 182-228 13-56 (127)
423 4dah_A Sporulation kinase D; a 46.3 42 0.0014 32.9 7.6 90 474-588 60-151 (217)
424 4e04_A Bacteriophytochrome (li 45.0 25 0.00085 37.7 5.8 55 483-544 30-84 (327)
425 3hhm_A Phosphatidylinositol-4, 43.1 1.5E+02 0.0052 36.9 12.9 41 774-818 918-960 (1091)
426 3e4o_A C4-dicarboxylate transp 39.8 3.3E+02 0.011 28.4 13.8 93 189-305 102-195 (305)
427 3s7o_A Bacteriophytochrome; bi 32.8 19 0.00066 38.8 2.5 41 201-243 54-94 (343)
428 1cja_A Protein (actin-fragmin 32.6 60 0.002 34.8 6.2 140 671-821 71-238 (342)
429 3lif_A Putative diguanylate cy 25.1 2.4E+02 0.008 27.9 9.3 88 474-586 60-151 (254)
430 3s7o_A Bacteriophytochrome; bi 24.8 27 0.00094 37.6 1.9 42 483-526 53-94 (343)
431 3by8_A Sensor protein DCUS; hi 23.4 1.1E+02 0.0038 27.9 5.7 76 483-588 57-132 (142)
432 3clo_A Transcriptional regulat 23.2 4.3E+02 0.015 26.5 10.9 45 186-232 30-74 (258)
433 2y3a_A Phosphatidylinositol-4, 23.2 81 0.0028 39.4 5.9 24 795-818 940-963 (1092)
434 3c8c_A Methyl-accepting chemot 22.9 3.1E+02 0.011 26.3 9.5 53 251-305 93-146 (240)
No 1
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.2e-50 Score=441.08 Aligned_cols=232 Identities=35% Similarity=0.623 Sum_probs=209.4
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
..++|++++.||+|+||+||+|+++.+++.||||++.+...........+.+|+++|+.|+|||||+++++|.+.+++||
T Consensus 30 ~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yi 109 (311)
T 4aw0_A 30 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF 109 (311)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred CccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 34689999999999999999999999999999999987655455567789999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
|||||+||+|.+++... +.+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+......
T Consensus 110 vmEy~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~- 186 (311)
T 4aw0_A 110 GLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES- 186 (311)
T ss_dssp EECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT-
T ss_pred EEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC-
Confidence 99999999999999875 349999999999999999999999999999999999999999999999999997543111
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
......+++||+.|||||++.+..|+.++|||||||+||+|++|++||.+.+..++
T Consensus 187 ------------------------~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~ 242 (311)
T 4aw0_A 187 ------------------------KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI 242 (311)
T ss_dssp ------------------------TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred ------------------------CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 11234567999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCcCCh
Q 002356 907 FANILHKDLKFPSSTPRSK 925 (931)
Q Consensus 907 ~~~I~~~~~~~p~~~~~~~ 925 (931)
+++|+++.+.+|+..+..+
T Consensus 243 ~~~i~~~~~~~p~~~s~~~ 261 (311)
T 4aw0_A 243 FAKIIKLEYDFPEKFFPKA 261 (311)
T ss_dssp HHHHHHTCCCCCTTCCHHH
T ss_pred HHHHHcCCCCCCcccCHHH
Confidence 9999999999998755433
No 2
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=9.8e-49 Score=435.08 Aligned_cols=227 Identities=24% Similarity=0.472 Sum_probs=197.6
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++++.||+|+||.||+|+++.+++.||||++.+... .......+.+|+.+|+.|+|||||+++++|.+.+.+|||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC-CHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 5799999999999999999999999999999999987643 345567899999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
||||+||+|.+++..+....+++..++.|+.||+.||.|||++|||||||||+||||+.+|.+||+|||+|+....
T Consensus 102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~---- 177 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS---- 177 (350)
T ss_dssp EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCH----
T ss_pred EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecC----
Confidence 9999999999999876666789999999999999999999999999999999999999999999999999965421
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
......+.+||+.|||||++.+..|+.++|||||||+||+|++|++||.+.+..+++
T Consensus 178 -----------------------~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~ 234 (350)
T 4b9d_A 178 -----------------------TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV 234 (350)
T ss_dssp -----------------------HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred -----------------------CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH
Confidence 011223568999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCC-CCCCCCc
Q 002356 908 ANILHKDL-KFPSSTP 922 (931)
Q Consensus 908 ~~I~~~~~-~~p~~~~ 922 (931)
.+|+++.+ .+|...+
T Consensus 235 ~~i~~~~~~~~~~~~s 250 (350)
T 4b9d_A 235 LKIISGSFPPVSLHYS 250 (350)
T ss_dssp HHHHHTCCCCCCTTSC
T ss_pred HHHHcCCCCCCCccCC
Confidence 99999876 3444433
No 3
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.6e-48 Score=415.76 Aligned_cols=228 Identities=30% Similarity=0.511 Sum_probs=190.3
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+|+.++|||||+++++|.+.+.+|||
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 36899999999999999999999999999999999887665556667899999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||| +|+|.+++..+ ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+....
T Consensus 92 mEy~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~---- 164 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD---- 164 (275)
T ss_dssp EECC-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred EeCC-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCC----
Confidence 9999 78999999875 3499999999999999999999999999999999999999999999999999964321
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
.....+.+||+.|||||++.+..| +.++|||||||+||+|++|++||.+.+..++
T Consensus 165 ------------------------~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~ 220 (275)
T 3hyh_A 165 ------------------------GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL 220 (275)
T ss_dssp ----------------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred ------------------------CCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence 112235689999999999998876 5799999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCcCChh
Q 002356 907 FANILHKDLKFPSSTPRSKE 926 (931)
Q Consensus 907 ~~~I~~~~~~~p~~~~~~~~ 926 (931)
+++|.++.+.+|...+....
T Consensus 221 ~~~i~~~~~~~p~~~s~~~~ 240 (275)
T 3hyh_A 221 FKNISNGVYTLPKFLSPGAA 240 (275)
T ss_dssp HHHHHHTCCCCCTTSCHHHH
T ss_pred HHHHHcCCCCCCCCCCHHHH
Confidence 99999999999987654443
No 4
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.7e-48 Score=424.49 Aligned_cols=231 Identities=42% Similarity=0.734 Sum_probs=198.1
Q ss_pred ccCCCccccccccccCcEEEEEEEEe---cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~---~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (931)
.+.++|++++.||+|+||+||+|++. .+++.||+|++++...... ....+.+|+.+|+.++|||||+++++|.+.+
T Consensus 21 ~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 99 (304)
T 3ubd_A 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-DRVRTKMERDILVEVNHPFIVKLHYAFQTEG 99 (304)
T ss_dssp CCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE-ECC------CCCCCCCCTTEECEEEEEEETT
T ss_pred CCccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH-HHHHHHHHHHHHHHCCCCCCCeEEEEEEECC
Confidence 44578999999999999999999984 4688999999987543322 2335778999999999999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
.+|||||||+||+|.+++.+. +.+++..++.++.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+...
T Consensus 100 ~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 177 (304)
T 3ubd_A 100 KLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177 (304)
T ss_dssp EEEEEECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred EEEEEEEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence 999999999999999999875 359999999999999999999999999999999999999999999999999996432
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
.. .....+.+||+.|||||++.+..|+.++|||||||+||+|++|++||.+.+
T Consensus 178 ~~---------------------------~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~ 230 (304)
T 3ubd_A 178 DH---------------------------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD 230 (304)
T ss_dssp ------------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CC---------------------------CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC
Confidence 11 122346789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCcCChh
Q 002356 903 RQKTFANILHKDLKFPSSTPRSKE 926 (931)
Q Consensus 903 ~~~~~~~I~~~~~~~p~~~~~~~~ 926 (931)
..+++.+|+++.+.+|...+....
T Consensus 231 ~~~~~~~i~~~~~~~p~~~s~~~~ 254 (304)
T 3ubd_A 231 RKETMTMILKAKLGMPQFLSPEAQ 254 (304)
T ss_dssp HHHHHHHHHHCCCCCCTTSCHHHH
T ss_pred HHHHHHHHHcCCCCCCCcCCHHHH
Confidence 999999999999999987655443
No 5
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3.5e-47 Score=421.94 Aligned_cols=214 Identities=28% Similarity=0.449 Sum_probs=193.5
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
...|++++.||+|+||.||+|.++.+|+.||||++.+.... ..+.+.+|+.+|+.++|||||+++++|.+.+.+|||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iv 149 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 149 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS---SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh---HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 35799999999999999999999999999999999765332 234578899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
||||+||+|.+++... .+++..++.|+.||+.||.|||++|||||||||+||||+.+|.+||+|||+|+.....
T Consensus 150 mEy~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~--- 223 (346)
T 4fih_A 150 MEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--- 223 (346)
T ss_dssp ECCCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS---
T ss_pred EeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCC---
Confidence 9999999999999763 4999999999999999999999999999999999999999999999999999654211
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
.....+.+||+.|||||++.+..|+.++|||||||+||||++|++||.+.+..+++
T Consensus 224 ------------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~ 279 (346)
T 4fih_A 224 ------------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM 279 (346)
T ss_dssp ------------------------SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred ------------------------CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH
Confidence 12234678999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCC
Q 002356 908 ANILHKD 914 (931)
Q Consensus 908 ~~I~~~~ 914 (931)
..|..+.
T Consensus 280 ~~i~~~~ 286 (346)
T 4fih_A 280 KMIRDNL 286 (346)
T ss_dssp HHHHHSS
T ss_pred HHHHcCC
Confidence 9998764
No 6
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3e-46 Score=424.47 Aligned_cols=227 Identities=27% Similarity=0.424 Sum_probs=198.6
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.+.|++++.||+|+||.||+|.++.+|+.||||++.+... .....+.+|+.+|+.|+|||||+++++|...+.+|||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV 226 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 226 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC---SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch---hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence 3579999999999999999999999999999999976533 2334578999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
||||+||+|.+++... .+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+.....
T Consensus 227 mEy~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~--- 300 (423)
T 4fie_A 227 MEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--- 300 (423)
T ss_dssp EECCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSS---
T ss_pred EeCCCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCC---
Confidence 9999999999999763 4999999999999999999999999999999999999999999999999999654211
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
.....+.+||+.|||||++.+..|+.++|||||||+||||++|++||.+.+..+++
T Consensus 301 ------------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~ 356 (423)
T 4fie_A 301 ------------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM 356 (423)
T ss_dssp ------------------------CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred ------------------------CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH
Confidence 12234678999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCC-CCCCCCcCChhh
Q 002356 908 ANILHKDL-KFPSSTPRSKEQ 927 (931)
Q Consensus 908 ~~I~~~~~-~~p~~~~~~~~~ 927 (931)
..|..+.. .++.....+.+.
T Consensus 357 ~~i~~~~~~~~~~~~~~s~~~ 377 (423)
T 4fie_A 357 KMIRDNLPPRLKNLHKVSPSL 377 (423)
T ss_dssp HHHHHSCCCCCSCTTSSCHHH
T ss_pred HHHHcCCCCCCcccccCCHHH
Confidence 99987643 333333344443
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.6e-46 Score=415.40 Aligned_cols=225 Identities=25% Similarity=0.388 Sum_probs=193.3
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
..+.|++.++||+|+||.||+|+++.+++.||||++++... ..+|+.+|+.|+|||||+++++|.+.+.+||
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~i 127 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLSSPRIVPLYGAVREGPWVNI 127 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEE
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 34679999999999999999999999999999999986532 2469999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-cEEEEeccCCcccCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g-~vkL~DFG~a~~~~~~~ 825 (931)
|||||+||+|.+++... +.+++..++.|+.||+.||.|||++|||||||||+||||+.+| .+||+|||+|+......
T Consensus 128 vmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 128 FMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp EECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred EEeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence 99999999999999875 3599999999999999999999999999999999999999888 69999999997643111
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
. ........+++||+.|||||++.+..|+.++|||||||+||+|++|++||.+.+..+
T Consensus 206 ~----------------------~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~ 263 (336)
T 4g3f_A 206 L----------------------GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 263 (336)
T ss_dssp ------------------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC
T ss_pred c----------------------ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH
Confidence 0 001122345789999999999999999999999999999999999999999988888
Q ss_pred HHHHHHcCCCC---CCCCCcC
Q 002356 906 TFANILHKDLK---FPSSTPR 923 (931)
Q Consensus 906 ~~~~I~~~~~~---~p~~~~~ 923 (931)
++.+|.++... +|+..+.
T Consensus 264 ~~~~i~~~~~~~~~~~~~~s~ 284 (336)
T 4g3f_A 264 LCLKIASEPPPIREIPPSCAP 284 (336)
T ss_dssp CHHHHHHSCCGGGGSCTTSCH
T ss_pred HHHHHHcCCCCchhcCccCCH
Confidence 99999988753 4554443
No 8
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.7e-45 Score=403.10 Aligned_cols=236 Identities=23% Similarity=0.366 Sum_probs=202.3
Q ss_pred cccCCCccccccccccCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~-----~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (931)
.+..++|.+.+.||+|+||.||++.+. .++..||||.++.. .....+.+.+|+++|++|+|||||++++++.
T Consensus 9 ~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~ 85 (299)
T 4asz_A 9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCV 85 (299)
T ss_dssp BCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred ccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhCCCCCCccEEEEEe
Confidence 466778999999999999999999875 35789999999754 3455678999999999999999999999999
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q 002356 740 TKTHVCLITDYCPGGELFLLLDRQ-----------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (931)
Q Consensus 740 ~~~~~~lVmE~~~ggsL~~~l~~~-----------~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g 808 (931)
+.+.+|||||||+||+|.++|... ....+++..+..|+.||+.||.|||+++||||||||+|||++.++
T Consensus 86 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~ 165 (299)
T 4asz_A 86 EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL 165 (299)
T ss_dssp SSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred eCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCC
Confidence 999999999999999999999763 234699999999999999999999999999999999999999999
Q ss_pred cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHH
Q 002356 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (931)
Q Consensus 809 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil 888 (931)
.+||+|||+|+..... ..........||+.|||||++.+..|+.++|||||||+|
T Consensus 166 ~~Ki~DFGla~~~~~~-------------------------~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl 220 (299)
T 4asz_A 166 LVKIGDFGMSRDVYST-------------------------DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL 220 (299)
T ss_dssp CEEECCCSCHHHHTGG-------------------------GCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred cEEECCcccceecCCC-------------------------CceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHH
Confidence 9999999999643211 011223345799999999999999999999999999999
Q ss_pred HHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCcCChhhh
Q 002356 889 YEMLY-GYTPFRGKTRQKTFANILHKD-LKFPSSTPRSKEQI 928 (931)
Q Consensus 889 ~ell~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~~~~~~~~ 928 (931)
|||+| |+.||.+.+..+++..|.++. +.+|..+|.....+
T Consensus 221 ~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~l 262 (299)
T 4asz_A 221 WEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYEL 262 (299)
T ss_dssp HHHHTTTCCTTTTSCHHHHHHHHHHTCCCCCCTTCCHHHHHH
T ss_pred HHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHH
Confidence 99998 999999999999999999886 57888777655544
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=8.7e-45 Score=394.77 Aligned_cols=214 Identities=25% Similarity=0.408 Sum_probs=184.4
Q ss_pred CCc-cccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe----CCe
Q 002356 669 QHF-RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----KTH 743 (931)
Q Consensus 669 ~~y-~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~----~~~ 743 (931)
++| .+.+.||+|+||.||+|.+..+++.||+|.+.+... .......+.+|+.+|+.|+|||||+++++|.. ...
T Consensus 25 gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~ 103 (290)
T 3fpq_A 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC 103 (290)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEE
T ss_pred CceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcE
Confidence 344 777889999999999999999999999999976543 44556789999999999999999999999865 467
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCCCcEEEec-CCcEEEEeccCCcc
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQG-NGHVSLTDFDLSCL 820 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g--IiHrDIKP~NIll~~-~g~vkL~DFG~a~~ 820 (931)
+|||||||+||+|.+++.+. ..+++..++.|+.||+.||.|||++| ||||||||+||||+. +|.+||+|||+|+.
T Consensus 104 ~~lvmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~ 181 (290)
T 3fpq_A 104 IVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence 89999999999999999875 45999999999999999999999998 999999999999984 78999999999954
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.. .....+.+||+.|||||++.+ .|+.++|||||||+||+|++|++||.+
T Consensus 182 ~~-----------------------------~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~ 231 (290)
T 3fpq_A 182 KR-----------------------------ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp CC-----------------------------TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CC-----------------------------CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 21 012345789999999999875 599999999999999999999999976
Q ss_pred C-CHHHHHHHHHcCCC
Q 002356 901 K-TRQKTFANILHKDL 915 (931)
Q Consensus 901 ~-~~~~~~~~I~~~~~ 915 (931)
. +...+++.|..+..
T Consensus 232 ~~~~~~~~~~i~~~~~ 247 (290)
T 3fpq_A 232 CQNAAQIYRRVTSGVK 247 (290)
T ss_dssp CSSHHHHHHHHTTTCC
T ss_pred CCcHHHHHHHHHcCCC
Confidence 4 55667777776643
No 10
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.4e-44 Score=399.22 Aligned_cols=236 Identities=22% Similarity=0.314 Sum_probs=197.5
Q ss_pred cccCCCccccccccccCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~-----~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (931)
.+...+|.+.+.||+|+||.||++++. .+++.||||+++.. .....+.+.+|+.+|++|+|||||++++++.
T Consensus 37 ~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~ 113 (329)
T 4aoj_A 37 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQHQHIVRFFGVCT 113 (329)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred ccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 456678999999999999999999874 36889999999754 3455678999999999999999999999999
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q 002356 740 TKTHVCLITDYCPGGELFLLLDRQP-------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 806 (931)
Q Consensus 740 ~~~~~~lVmE~~~ggsL~~~l~~~~-------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~ 806 (931)
+.+.+|||||||++|+|.+++.... ...+++..+..|+.||+.||.|||+++||||||||+||||+.
T Consensus 114 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~ 193 (329)
T 4aoj_A 114 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ 193 (329)
T ss_dssp SSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEET
T ss_pred ECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECC
Confidence 9999999999999999999997642 235899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHH
Q 002356 807 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 886 (931)
Q Consensus 807 ~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGv 886 (931)
++.+||+|||+|+...... ........+||+.|||||++.+..|+.++|||||||
T Consensus 194 ~~~~Ki~DFGla~~~~~~~-------------------------~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gv 248 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTD-------------------------YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGV 248 (329)
T ss_dssp TTEEEECCCC-----------------------------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHH
T ss_pred CCcEEEcccccceeccCCC-------------------------cceecCcccccccccChhhhcCCCCCccccccchHH
Confidence 9999999999996542110 112234567999999999999999999999999999
Q ss_pred HHHHHHc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCcCChhhh
Q 002356 887 LLYEMLY-GYTPFRGKTRQKTFANILHK-DLKFPSSTPRSKEQI 928 (931)
Q Consensus 887 il~ell~-G~~Pf~~~~~~~~~~~I~~~-~~~~p~~~~~~~~~~ 928 (931)
+||||++ |+.||.+.+..+++..|.++ .+.+|..++.....|
T Consensus 249 vl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~l 292 (329)
T 4aoj_A 249 VLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAI 292 (329)
T ss_dssp HHHHHHTTSCCTTCSSCHHHHHHHHHHTCCCCCCTTCCHHHHHH
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCcccccHHHHHH
Confidence 9999998 99999999999999999887 478888777655544
No 11
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=6.5e-44 Score=390.73 Aligned_cols=222 Identities=21% Similarity=0.313 Sum_probs=184.1
Q ss_pred cccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (931)
.|.+..++|++.+.||+|+||+||++.+.. .+|||+++... ........+.+|+.+|++++|||||++++++.. +
T Consensus 30 ~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~-~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~ 104 (307)
T 3omv_A 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVD-PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-D 104 (307)
T ss_dssp CCBCCTTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-S
T ss_pred CcEEcHHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-C
Confidence 456888999999999999999999998643 58999987542 345667889999999999999999999998754 5
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
.+|||||||+||+|.+++.... ..+++..+..|+.||+.||.|||++|||||||||+||||+.++.+||+|||+|+...
T Consensus 105 ~~~iVmEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 183 (307)
T 3omv_A 105 NLAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp SCEEEEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC--
T ss_pred eEEEEEEcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecc
Confidence 6899999999999999997653 459999999999999999999999999999999999999999999999999996542
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC---CCCCChhhHHHHHHHHHHHHcCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFR 899 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~ell~G~~Pf~ 899 (931)
... ........+||+.|||||++.+ ..|+.++|||||||+||||++|+.||.
T Consensus 184 ~~~-------------------------~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~ 238 (307)
T 3omv_A 184 RWS-------------------------GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYS 238 (307)
T ss_dssp -----------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred cCC-------------------------cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCC
Confidence 110 0112345689999999999964 358889999999999999999999999
Q ss_pred CCCHHHHHHHHHcCCC
Q 002356 900 GKTRQKTFANILHKDL 915 (931)
Q Consensus 900 ~~~~~~~~~~I~~~~~ 915 (931)
+.+....+..++....
T Consensus 239 ~~~~~~~~~~~~~~~~ 254 (307)
T 3omv_A 239 HINNRDQIIFMVGRGY 254 (307)
T ss_dssp TCCCHHHHHHHHHTTC
T ss_pred CCChHHHHHHHHhcCC
Confidence 8776666665555443
No 12
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=4e-44 Score=393.85 Aligned_cols=236 Identities=22% Similarity=0.346 Sum_probs=201.1
Q ss_pred ccCCCccccccccccCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~-----~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (931)
+...++++.+.||+|+||.||++... .+++.||||.++... .....+.+.+|+.+|++++|||||++++++..
T Consensus 23 i~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~ 100 (308)
T 4gt4_A 23 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARLQHPNVVCLLGVVTK 100 (308)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE
Confidence 55678899999999999999999863 467899999997542 33445779999999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 806 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~ 806 (931)
.+.+|||||||++|+|.++|..+. ...+++..+..|+.||+.||.|||+++||||||||+||||+.
T Consensus 101 ~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~ 180 (308)
T 4gt4_A 101 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYD 180 (308)
T ss_dssp SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECC
Confidence 999999999999999999996532 135899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHH
Q 002356 807 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 886 (931)
Q Consensus 807 ~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGv 886 (931)
++.+||+|||+|+..... .........+||+.|||||++.+..|+.++|||||||
T Consensus 181 ~~~~Ki~DFGlar~~~~~-------------------------~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGv 235 (308)
T 4gt4_A 181 KLNVKISDLGLFREVYAA-------------------------DYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGV 235 (308)
T ss_dssp GGCEEECCSCCBCGGGGG-------------------------GCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred CCCEEECCcccceeccCC-------------------------CceeEecccccCCcccCHHHHhCCCCCccchhhhHHH
Confidence 999999999999654211 1112334568999999999999999999999999999
Q ss_pred HHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCcCChhhh
Q 002356 887 LLYEMLY-GYTPFRGKTRQKTFANILHKD-LKFPSSTPRSKEQI 928 (931)
Q Consensus 887 il~ell~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~~~~~~~~ 928 (931)
+||||++ |..||.+.+..+++..|.++. +..|+.+|.....+
T Consensus 236 vl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~l 279 (308)
T 4gt4_A 236 VLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYAL 279 (308)
T ss_dssp HHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCcccchHHHHHH
Confidence 9999998 999999999999999999875 57788777655544
No 13
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=4e-44 Score=424.45 Aligned_cols=234 Identities=31% Similarity=0.566 Sum_probs=200.6
Q ss_pred ccccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHH---HHHHHhcCCCCccceeEEE
Q 002356 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAE---REILDMLDHPFVPALYASF 738 (931)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E---~~il~~l~hpnIv~l~~~~ 738 (931)
....+..++|++++.||+|+||.||+|+++.+++.||||++.+.............+| +.+++.++|||||+++++|
T Consensus 182 ~~~~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f 261 (689)
T 3v5w_A 182 LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF 261 (689)
T ss_dssp TTCCCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEE
T ss_pred cCCCCchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEE
Confidence 3445677899999999999999999999999999999999987644333333334444 5666677999999999999
Q ss_pred EeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCC
Q 002356 739 QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (931)
Q Consensus 739 ~~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a 818 (931)
.+.+++|||||||+||+|.+++... ..+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|
T Consensus 262 ~~~~~lylVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA 339 (689)
T 3v5w_A 262 HTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339 (689)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EECCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEeccccee
Confidence 9999999999999999999999875 35999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~P 897 (931)
+.... ....+.+||+.|||||++.. ..|+.++|||||||+||+|++|.+|
T Consensus 340 ~~~~~-----------------------------~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~P 390 (689)
T 3v5w_A 340 CDFSK-----------------------------KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390 (689)
T ss_dssp EECSS-----------------------------CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred eecCC-----------------------------CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 65421 12346789999999999964 6799999999999999999999999
Q ss_pred CCC---CCHHHHHHHHHcCCCCCCCCCcCChh
Q 002356 898 FRG---KTRQKTFANILHKDLKFPSSTPRSKE 926 (931)
Q Consensus 898 f~~---~~~~~~~~~I~~~~~~~p~~~~~~~~ 926 (931)
|.+ .+..+++..+....+.+|...+..+.
T Consensus 391 F~~~~~~~~~~i~~~i~~~~~~~p~~~S~~a~ 422 (689)
T 3v5w_A 391 FRQHKTKDKHEIDRMTLTMAVELPDSFSPELR 422 (689)
T ss_dssp TCGGGCCCHHHHHHHHHHCCCCCCTTSCHHHH
T ss_pred CCCCChHHHHHHHHhhcCCCCCCCccCCHHHH
Confidence 976 35567888999999999987654443
No 14
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=5e-43 Score=398.52 Aligned_cols=220 Identities=25% Similarity=0.383 Sum_probs=189.7
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe------C
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------K 741 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~ 741 (931)
.++|++++.||+|+||+||+|.++.+|+.||||++.+.. ........+.+|+.+|+.|+|||||++++++.. .
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF-DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccc-cchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 368999999999999999999999999999999997643 344556778899999999999999999999764 3
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
+.+||||||| +|+|.+++... +.+++..++.|+.||+.||.|||++|||||||||+|||++.+|.+||+|||+|+..
T Consensus 132 ~~~~ivmE~~-~g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 132 KSVYVVLDLM-ESDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp CCEEEEEECC-SEEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred CEEEEEEeCC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 6789999999 57899999765 45999999999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
..... .......+.+||+.|||||++.+. .|+.++|||||||++|+|++|++||.+
T Consensus 209 ~~~~~-----------------------~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g 265 (398)
T 4b99_A 209 CTSPA-----------------------EHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 265 (398)
T ss_dssp ------------------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred ccCcc-----------------------ccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCC
Confidence 32110 011234567999999999998875 568999999999999999999999999
Q ss_pred CCHHHHHHHHHcCC
Q 002356 901 KTRQKTFANILHKD 914 (931)
Q Consensus 901 ~~~~~~~~~I~~~~ 914 (931)
.+..+++..|.+..
T Consensus 266 ~~~~~~l~~I~~~~ 279 (398)
T 4b99_A 266 KNYVHQLQLIMMVL 279 (398)
T ss_dssp SSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhc
Confidence 99999999997643
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.2e-42 Score=378.86 Aligned_cols=225 Identities=24% Similarity=0.390 Sum_probs=170.3
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC------
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT------ 742 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~------ 742 (931)
++|++++.||+|+||.||+|+++.+++.||||++.... .....+.+.+|+.+|+.|+|||||+++++|...+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 46999999999999999999999999999999997542 3445577889999999999999999999987543
Q ss_pred ------eEEEEEeccCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEec
Q 002356 743 ------HVCLITDYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (931)
Q Consensus 743 ------~~~lVmE~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DF 815 (931)
++|||||||+||+|.+++..+.. ...+...++.|+.||+.||+|||++|||||||||+||||+.+|.+||+||
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccC
Confidence 47999999999999999986532 22456678999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCC
Q 002356 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 895 (931)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~ 895 (931)
|+|+.......... ............+.+||+.|||||++.+..|+.++|||||||+||||++
T Consensus 163 Gla~~~~~~~~~~~---------------~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~-- 225 (299)
T 4g31_A 163 GLVTAMDQDEEEQT---------------VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY-- 225 (299)
T ss_dssp CCC-----------------------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS--
T ss_pred ccceecCCCccccc---------------cccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc--
Confidence 99976542211000 0000111123346789999999999999999999999999999999996
Q ss_pred CCCCCCC-HHHHHHHHHcC
Q 002356 896 TPFRGKT-RQKTFANILHK 913 (931)
Q Consensus 896 ~Pf~~~~-~~~~~~~I~~~ 913 (931)
||.+.. ....+..+.+.
T Consensus 226 -Pf~~~~~~~~~~~~~~~~ 243 (299)
T 4g31_A 226 -PFSTQMERVRTLTDVRNL 243 (299)
T ss_dssp -CCSSHHHHHHHHHHHHTT
T ss_pred -CCCCccHHHHHHHHHhcC
Confidence 886532 22334444433
No 16
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=7.8e-42 Score=407.21 Aligned_cols=221 Identities=28% Similarity=0.473 Sum_probs=199.0
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++++.||+|+||.||+|.++.+|+.||+|++.+. .......+.+|+.+|+.|+|||||+++++|.+.+.+|||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~---~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc---chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 46899999999999999999999999999999999764 234456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC--CcEEEEeccCCcccCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN--GHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~--g~vkL~DFG~a~~~~~~~ 825 (931)
||||+||+|.+++.... ..+++..++.|+.||+.||.|||++||+||||||+|||++.+ +.+||+|||+|+....
T Consensus 233 ~E~~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~-- 309 (573)
T 3uto_A 233 YEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP-- 309 (573)
T ss_dssp EECCCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT--
T ss_pred EeecCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccC--
Confidence 99999999999996542 459999999999999999999999999999999999999854 8999999999965431
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
.....+.+||+.|||||++.+..|+.++|||||||+||+|++|.+||.+.+..+
T Consensus 310 --------------------------~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~ 363 (573)
T 3uto_A 310 --------------------------KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 363 (573)
T ss_dssp --------------------------TSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH
T ss_pred --------------------------CCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH
Confidence 112235689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCC
Q 002356 906 TFANILHKDLKFPSS 920 (931)
Q Consensus 906 ~~~~I~~~~~~~p~~ 920 (931)
++.+|.++.+.+|..
T Consensus 364 ~~~~i~~~~~~~~~~ 378 (573)
T 3uto_A 364 TLRNVKSCDWNMDDS 378 (573)
T ss_dssp HHHHHHTTCCCCCSG
T ss_pred HHHHHHhCCCCCCcc
Confidence 999999998887754
No 17
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4e-42 Score=384.59 Aligned_cols=238 Identities=24% Similarity=0.343 Sum_probs=197.9
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecC-----CeEEEEEEeecccccChHHHHHHHHHHHHHHhcCC-CCccceeEE
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH-PFVPALYAS 737 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~-----~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~h-pnIv~l~~~ 737 (931)
|.+..++|++.+.||+|+||.||++.+..+ ++.||+|.+.... .......+.+|+.+|.++.| ||||+++++
T Consensus 59 wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~--~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--ChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 567788999999999999999999998764 3689999987643 34456778999999999965 899999999
Q ss_pred EEe-CCeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcE
Q 002356 738 FQT-KTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (931)
Q Consensus 738 ~~~-~~~~~lVmE~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NI 802 (931)
|.. .+.+|||||||++|+|.++|.... ...+++..+..|+.||+.||.|||+++||||||||+||
T Consensus 137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NI 216 (353)
T 4ase_A 137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 216 (353)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccce
Confidence 865 467899999999999999997532 23489999999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHH
Q 002356 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (931)
Q Consensus 803 ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~Diw 882 (931)
|++.++.+||+|||+|+...... ........+||+.|||||++.+..|+.++|||
T Consensus 217 Ll~~~~~vKi~DFGlar~~~~~~-------------------------~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVw 271 (353)
T 4ase_A 217 LLSEKNVVKICDFGLARDIYKDP-------------------------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 271 (353)
T ss_dssp EECGGGCEEECCCGGGSCTTTCT-------------------------TSEEETTEEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred eeCCCCCEEECcchhhhhcccCC-------------------------CceeeccccccccccCHHHHhcCCCCCcccEe
Confidence 99999999999999996543111 11223456799999999999999999999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCCH-HHHHHHHHcC-CCCCCCCCcCChhhh
Q 002356 883 ALGILLYEMLY-GYTPFRGKTR-QKTFANILHK-DLKFPSSTPRSKEQI 928 (931)
Q Consensus 883 SlGvil~ell~-G~~Pf~~~~~-~~~~~~I~~~-~~~~p~~~~~~~~~~ 928 (931)
||||+||||++ |+.||.+.+. ..+.+.+.++ .+.+|+.++....++
T Consensus 272 S~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~l 320 (353)
T 4ase_A 272 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 320 (353)
T ss_dssp HHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHH
T ss_pred ehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHH
Confidence 99999999998 9999998664 4555666665 467888776555444
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.6e-41 Score=380.18 Aligned_cols=234 Identities=25% Similarity=0.353 Sum_probs=178.8
Q ss_pred CCCccccccccccCcEEEEEEEEe---cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCe
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~---~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (931)
.++|++.+.||+|+||+||+|.++ .+++.||+|.+.+.. ...++.+|+++|+.+ +||||++++++|...++
T Consensus 20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 468999999999999999999985 467899999986542 235678899999998 79999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC-CcEEEEeccCCcccC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTS 822 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~-g~vkL~DFG~a~~~~ 822 (931)
+|||||||+||+|.+++.. +++..++.++.||+.||+|||++|||||||||+|||++.+ +.+||+|||+|+...
T Consensus 95 ~~lvmE~~~g~~L~~~~~~-----l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~ 169 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILNS-----LSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH 169 (361)
T ss_dssp EEEEEECCCCCCHHHHHTT-----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred EEEEEeCCCcccHHHHHcC-----CCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence 9999999999999999842 8999999999999999999999999999999999999876 799999999997654
Q ss_pred CCCCCCCCcchhhhhcc-cCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCC-
Q 002356 823 CKPQLLLPTTNEKKRRH-KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFR- 899 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~- 899 (931)
................. .................+.+||+.|||||++.+. .|+.++||||+||++|+|++|++||.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp TCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred CccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 32211100000000000 0000000001111234467899999999999875 58899999999999999999999995
Q ss_pred CCCHHHHHHHHH
Q 002356 900 GKTRQKTFANIL 911 (931)
Q Consensus 900 ~~~~~~~~~~I~ 911 (931)
+.+..+.+.+|.
T Consensus 250 ~~~~~~~l~~I~ 261 (361)
T 4f9c_A 250 ASDDLTALAQIM 261 (361)
T ss_dssp CSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 456666666664
No 19
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=372.68 Aligned_cols=233 Identities=37% Similarity=0.730 Sum_probs=201.3
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCC
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 742 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 742 (931)
..+..++|++++.||+|+||.||+|++..+++.||||++.+...........+.+|..+|+.+ +||||++++++|...+
T Consensus 18 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~ 97 (353)
T 3txo_A 18 NRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD 97 (353)
T ss_dssp -----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred CCCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC
Confidence 346678999999999999999999999999999999999876544455667788999999988 7999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
.+|+|||||.||+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++....
T Consensus 98 ~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 98 RLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 999999999999999999875 349999999999999999999999999999999999999999999999999985421
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
. ......+.+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+
T Consensus 176 ~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~ 228 (353)
T 3txo_A 176 C---------------------------NGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 228 (353)
T ss_dssp C------------------------------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred c---------------------------CCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC
Confidence 1 0112345689999999999998889999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCcCCh
Q 002356 903 RQKTFANILHKDLKFPSSTPRSK 925 (931)
Q Consensus 903 ~~~~~~~I~~~~~~~p~~~~~~~ 925 (931)
..+++.+|+++.+.+|...+...
T Consensus 229 ~~~~~~~i~~~~~~~p~~~~~~~ 251 (353)
T 3txo_A 229 EDDLFEAILNDEVVYPTWLHEDA 251 (353)
T ss_dssp HHHHHHHHHHCCCCCCTTSCHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCHHH
Confidence 99999999999999998755443
No 20
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=5.6e-40 Score=367.06 Aligned_cols=232 Identities=38% Similarity=0.768 Sum_probs=206.1
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
+..++|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+|+.++||||+++++++...+.+|
T Consensus 2 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 81 (337)
T 1o6l_A 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC 81 (337)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred CChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEE
Confidence 34678999999999999999999999999999999998764434445677889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
+||||++||+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 82 lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 158 (337)
T 1o6l_A 82 FVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD- 158 (337)
T ss_dssp EEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-
T ss_pred EEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccC-
Confidence 999999999999999864 35999999999999999999999999999999999999999999999999998542110
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
.....+.+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+
T Consensus 159 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~ 212 (337)
T 1o6l_A 159 --------------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212 (337)
T ss_dssp --------------------------TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred --------------------------CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH
Confidence 112345689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCcCChh
Q 002356 906 TFANILHKDLKFPSSTPRSKE 926 (931)
Q Consensus 906 ~~~~I~~~~~~~p~~~~~~~~ 926 (931)
+++.|..+.+.+|...+....
T Consensus 213 ~~~~i~~~~~~~p~~~s~~~~ 233 (337)
T 1o6l_A 213 LFELILMEEIRFPRTLSPEAK 233 (337)
T ss_dssp HHHHHHHCCCCCCTTSCHHHH
T ss_pred HHHHHHcCCCCCCCCCCHHHH
Confidence 999999999999986654433
No 21
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-39 Score=361.96 Aligned_cols=228 Identities=41% Similarity=0.813 Sum_probs=204.6
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
+..++|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+...+|
T Consensus 3 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 82 (318)
T 1fot_A 3 YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIF 82 (318)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEE
T ss_pred CChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEE
Confidence 34678999999999999999999999999999999998754433345667889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
+||||+.||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++....
T Consensus 83 lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~--- 157 (318)
T 1fot_A 83 MIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP--- 157 (318)
T ss_dssp EEECCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECS---
T ss_pred EEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecC---
Confidence 999999999999999875 349999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
....+.+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+
T Consensus 158 ---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~ 210 (318)
T 1fot_A 158 ---------------------------DVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK 210 (318)
T ss_dssp ---------------------------SCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred ---------------------------CccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH
Confidence 11235679999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCcCCh
Q 002356 906 TFANILHKDLKFPSSTPRSK 925 (931)
Q Consensus 906 ~~~~I~~~~~~~p~~~~~~~ 925 (931)
++.+|+++.+.+|...+...
T Consensus 211 ~~~~i~~~~~~~p~~~~~~~ 230 (318)
T 1fot_A 211 TYEKILNAELRFPPFFNEDV 230 (318)
T ss_dssp HHHHHHHCCCCCCTTSCHHH
T ss_pred HHHHHHhCCCCCCCCCCHHH
Confidence 99999999999997655433
No 22
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.5e-39 Score=365.78 Aligned_cols=233 Identities=35% Similarity=0.677 Sum_probs=205.0
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCe
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (931)
.+..++|++++.||+|+||.||+|++..+++.||||++.+...........+..|..+|..+ +||||+++++++...+.
T Consensus 16 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~ 95 (353)
T 2i0e_A 16 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 95 (353)
T ss_dssp ---CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSE
T ss_pred CCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCE
Confidence 35678999999999999999999999999999999999876443444567788999999988 89999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+|+||||++||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 96 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 96 LYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 99999999999999999864 3499999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
. .......+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+.
T Consensus 174 ~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~ 226 (353)
T 2i0e_A 174 D---------------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 226 (353)
T ss_dssp T---------------------------TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred C---------------------------CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH
Confidence 0 1123456899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCcCChh
Q 002356 904 QKTFANILHKDLKFPSSTPRSKE 926 (931)
Q Consensus 904 ~~~~~~I~~~~~~~p~~~~~~~~ 926 (931)
.+++++|+++.+.+|...+....
T Consensus 227 ~~~~~~i~~~~~~~p~~~s~~~~ 249 (353)
T 2i0e_A 227 DELFQSIMEHNVAYPKSMSKEAV 249 (353)
T ss_dssp HHHHHHHHHCCCCCCTTSCHHHH
T ss_pred HHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999999987654433
No 23
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.1e-39 Score=363.41 Aligned_cols=232 Identities=35% Similarity=0.718 Sum_probs=203.8
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCe
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (931)
.+..++|.+.+.||+|+||.||+|+++.+++.||+|++++...........+..|..+|..+ +||||+++++++...+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 35678999999999999999999999999999999999876433344556778899999877 99999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+|+|||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 99999999999999999874 3499999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
. .......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+.
T Consensus 171 ~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~ 223 (345)
T 1xjd_A 171 G---------------------------DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE 223 (345)
T ss_dssp T---------------------------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred C---------------------------CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH
Confidence 0 1123467899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCcCCh
Q 002356 904 QKTFANILHKDLKFPSSTPRSK 925 (931)
Q Consensus 904 ~~~~~~I~~~~~~~p~~~~~~~ 925 (931)
.+++.+|..+...+|...+...
T Consensus 224 ~~~~~~i~~~~~~~p~~~s~~~ 245 (345)
T 1xjd_A 224 EELFHSIRMDNPFYPRWLEKEA 245 (345)
T ss_dssp HHHHHHHHHCCCCCCTTSCHHH
T ss_pred HHHHHHHHhCCCCCCcccCHHH
Confidence 9999999999999987655443
No 24
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.9e-39 Score=364.79 Aligned_cols=229 Identities=38% Similarity=0.696 Sum_probs=206.0
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
...++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+|+.++||||+++++++.....+|
T Consensus 38 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 117 (350)
T 1rdq_E 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLY 117 (350)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred CCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence 45679999999999999999999999999999999998764434445677889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
+||||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 118 lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~-- 193 (350)
T 1rdq_E 118 MVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-- 193 (350)
T ss_dssp EEEECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS--
T ss_pred EEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccC--
Confidence 999999999999999875 3499999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
...+.+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+
T Consensus 194 ----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~ 245 (350)
T 1rdq_E 194 ----------------------------RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245 (350)
T ss_dssp ----------------------------CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ----------------------------CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH
Confidence 1234679999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCcCChh
Q 002356 906 TFANILHKDLKFPSSTPRSKE 926 (931)
Q Consensus 906 ~~~~I~~~~~~~p~~~~~~~~ 926 (931)
++.+|.++.+.+|...+....
T Consensus 246 ~~~~i~~~~~~~p~~~~~~~~ 266 (350)
T 1rdq_E 246 IYEKIVSGKVRFPSHFSSDLK 266 (350)
T ss_dssp HHHHHHHCCCCCCTTCCHHHH
T ss_pred HHHHHHcCCCCCCCCCCHHHH
Confidence 999999999999987654443
No 25
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=6e-39 Score=357.49 Aligned_cols=230 Identities=29% Similarity=0.528 Sum_probs=204.6
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
+...++|++++.||+|+||.||++.+..+++.||+|++.+... .......+.+|+.+|+.++||||+++++++...+.+
T Consensus 11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 89 (328)
T 3fe3_A 11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTL 89 (328)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEE
Confidence 3456799999999999999999999999999999999977543 445667888999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+||||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 90 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 90 YLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp EEEECCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred EEEEECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence 9999999999999999765 34999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCC-ChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
......+||+.|+|||++.+..+. .++|||||||++|+|++|++||.+.+.
T Consensus 168 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 219 (328)
T 3fe3_A 168 ----------------------------GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 219 (328)
T ss_dssp ----------------------------CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ----------------------------CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH
Confidence 122356799999999999988775 699999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCcCCh
Q 002356 904 QKTFANILHKDLKFPSSTPRSK 925 (931)
Q Consensus 904 ~~~~~~I~~~~~~~p~~~~~~~ 925 (931)
.++...+..+.+.+|...+...
T Consensus 220 ~~~~~~i~~~~~~~p~~~s~~~ 241 (328)
T 3fe3_A 220 KELRERVLRGKYRIPFYMSTDC 241 (328)
T ss_dssp HHHHHHHHHCCCCCCTTSCHHH
T ss_pred HHHHHHHHhCCCCCCCCCCHHH
Confidence 9999999999999987655433
No 26
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3.7e-39 Score=367.42 Aligned_cols=233 Identities=37% Similarity=0.706 Sum_probs=201.5
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCe
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (931)
.+..++|++++.||+|+||.||+|++..+++.||+|++++...........+..|..+|..+ +||||++++++|...+.
T Consensus 48 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~ 127 (396)
T 4dc2_A 48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR 127 (396)
T ss_dssp -CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCE
Confidence 35677999999999999999999999999999999999887655555666788999999887 89999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+|+|||||+||+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+....
T Consensus 128 ~~lV~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 128 LFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEEEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 99999999999999999875 3499999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC---
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG--- 900 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~--- 900 (931)
......+.+||+.|+|||++.+..++.++|||||||++|+|++|++||.+
T Consensus 206 ---------------------------~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~ 258 (396)
T 4dc2_A 206 ---------------------------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 258 (396)
T ss_dssp ---------------------------TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC
T ss_pred ---------------------------CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc
Confidence 11223467899999999999999999999999999999999999999963
Q ss_pred ------CCHHHHHHHHHcCCCCCCCCCcCChh
Q 002356 901 ------KTRQKTFANILHKDLKFPSSTPRSKE 926 (931)
Q Consensus 901 ------~~~~~~~~~I~~~~~~~p~~~~~~~~ 926 (931)
.....+++.|+.+.+.+|...+..+.
T Consensus 259 ~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~ 290 (396)
T 4dc2_A 259 SDNPDQNTEDYLFQVILEKQIRIPRSLSVKAA 290 (396)
T ss_dssp ------CCHHHHHHHHHHCCCCCCTTSCHHHH
T ss_pred ccccchhhHHHHHHHHhccccCCCCcCCHHHH
Confidence 23456788899999999987654443
No 27
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.9e-39 Score=367.66 Aligned_cols=233 Identities=39% Similarity=0.701 Sum_probs=197.3
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHH-HHhcCCCCccceeEEEEeCCe
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI-LDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~i-l~~l~hpnIv~l~~~~~~~~~ 743 (931)
.+..++|++++.||+|+||.||+|+++.+++.||||++.+...........+..|..+ ++.++||||++++++|...+.
T Consensus 34 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~ 113 (373)
T 2r5t_A 34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADK 113 (373)
T ss_dssp TCCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSE
T ss_pred CCChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCE
Confidence 3567899999999999999999999999999999999988765555556667778777 577899999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+|+||||+.||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 114 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 114 LYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 99999999999999999874 3489999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
......+.+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+.
T Consensus 192 ---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~ 244 (373)
T 2r5t_A 192 ---------------------------HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT 244 (373)
T ss_dssp ---------------------------CCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH
T ss_pred ---------------------------CCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH
Confidence 01223467899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCcCChh
Q 002356 904 QKTFANILHKDLKFPSSTPRSKE 926 (931)
Q Consensus 904 ~~~~~~I~~~~~~~p~~~~~~~~ 926 (931)
.+++++|+++.+.+|...+....
T Consensus 245 ~~~~~~i~~~~~~~~~~~~~~~~ 267 (373)
T 2r5t_A 245 AEMYDNILNKPLQLKPNITNSAR 267 (373)
T ss_dssp HHHHHHHHHSCCCCCSSSCHHHH
T ss_pred HHHHHHHHhcccCCCCCCCHHHH
Confidence 99999999999999887655443
No 28
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=8.5e-39 Score=358.80 Aligned_cols=231 Identities=38% Similarity=0.713 Sum_probs=204.0
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 744 (931)
+..++|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|..+++.+ +||||++++++|...+.+
T Consensus 6 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 85 (345)
T 3a8x_A 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL 85 (345)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEE
Confidence 4567999999999999999999999999999999999987666667778889999999988 899999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+||||++||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 86 ~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~- 162 (345)
T 3a8x_A 86 FFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR- 162 (345)
T ss_dssp EEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC-
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccC-
Confidence 9999999999999999875 3499999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC----
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG---- 900 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~---- 900 (931)
........+||+.|+|||++.+..++.++|||||||++|+|++|++||..
T Consensus 163 --------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~ 216 (345)
T 3a8x_A 163 --------------------------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS 216 (345)
T ss_dssp --------------------------TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-
T ss_pred --------------------------CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccc
Confidence 01123456899999999999999999999999999999999999999975
Q ss_pred -----CCHHHHHHHHHcCCCCCCCCCcCCh
Q 002356 901 -----KTRQKTFANILHKDLKFPSSTPRSK 925 (931)
Q Consensus 901 -----~~~~~~~~~I~~~~~~~p~~~~~~~ 925 (931)
.....+++.|..+.+.+|...+...
T Consensus 217 ~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~ 246 (345)
T 3a8x_A 217 DNPDQNTEDYLFQVILEKQIRIPRSLSVKA 246 (345)
T ss_dssp ------CHHHHHHHHHHCCCCCCTTSCHHH
T ss_pred cccccccHHHHHHHHHcCCCCCCCCCCHHH
Confidence 3456778888999999987655433
No 29
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1e-39 Score=373.96 Aligned_cols=236 Identities=35% Similarity=0.647 Sum_probs=203.7
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+..++|.+++.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.++||||++++++|.+...+
T Consensus 65 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 144 (410)
T 3v8s_A 65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 144 (410)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEE
Confidence 45678999999999999999999999999999999999764332333344577899999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+|||||+||+|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|......
T Consensus 145 ~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~ 221 (410)
T 3v8s_A 145 YMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 221 (410)
T ss_dssp EEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccC
Confidence 9999999999999999763 4899999999999999999999999999999999999999999999999999654211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC----CCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~----~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
. .....+.+||+.|+|||++.+.. ++.++|||||||+||+|++|++||.+
T Consensus 222 ~--------------------------~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 275 (410)
T 3v8s_A 222 G--------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275 (410)
T ss_dssp S--------------------------EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred C--------------------------cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC
Confidence 0 11234668999999999998765 77899999999999999999999999
Q ss_pred CCHHHHHHHHHcC--CCCCCCCCcCChhhhh
Q 002356 901 KTRQKTFANILHK--DLKFPSSTPRSKEQIR 929 (931)
Q Consensus 901 ~~~~~~~~~I~~~--~~~~p~~~~~~~~~~~ 929 (931)
.+..+++.+|+++ .+.+|.....+.+..+
T Consensus 276 ~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~ 306 (410)
T 3v8s_A 276 DSLVGTYSKIMNHKNSLTFPDDNDISKEAKN 306 (410)
T ss_dssp SSHHHHHHHHHTHHHHCCCCTTCCCCHHHHH
T ss_pred CChhhHHHHHHhccccccCCCcccccHHHHH
Confidence 9999999999875 3778876555555443
No 30
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.6e-39 Score=357.53 Aligned_cols=199 Identities=25% Similarity=0.340 Sum_probs=160.3
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC----eE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----HV 744 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----~~ 744 (931)
.+|.+.+.||+|+||.||++.+ +|+.||||+++... .....+..|+..+..++|||||++++++...+ .+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~----~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~ 76 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc----hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEE
Confidence 4688999999999999999987 68999999986542 12222334566667889999999999997653 68
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCccCCCCCCcEEEecCCcEEEEecc
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------GIIYRDLKPENVLLQGNGHVSLTDFD 816 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~--------gIiHrDIKP~NIll~~~g~vkL~DFG 816 (931)
|||||||+||+|.+++... .++++.+..++.|++.||+|||++ |||||||||+||||+.++.+||+|||
T Consensus 77 ~lV~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG 153 (303)
T 3hmm_A 77 WLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EEEecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence 9999999999999999864 389999999999999999999987 99999999999999999999999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC------CCCChhhHHHHHHHHHH
Q 002356 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA------GHTSAVDWWALGILLYE 890 (931)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~------~~~~~~DiwSlGvil~e 890 (931)
+|+........ ........+||+.|||||++.+. .++.++|||||||+|||
T Consensus 154 la~~~~~~~~~-----------------------~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~E 210 (303)
T 3hmm_A 154 LAVRHDSATDT-----------------------IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 210 (303)
T ss_dssp TCEEEETTTTE-----------------------ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCccccCCCCc-----------------------eeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHH
Confidence 99654311100 01122356899999999999764 35669999999999999
Q ss_pred HHcCCCCCC
Q 002356 891 MLYGYTPFR 899 (931)
Q Consensus 891 ll~G~~Pf~ 899 (931)
|++|.+||.
T Consensus 211 l~tg~~~~~ 219 (303)
T 3hmm_A 211 IARRCSIGG 219 (303)
T ss_dssp HHHTBCBTT
T ss_pred HHHCCCCCC
Confidence 999977653
No 31
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=9.5e-39 Score=362.78 Aligned_cols=235 Identities=34% Similarity=0.655 Sum_probs=204.7
Q ss_pred cccccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe
Q 002356 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (931)
Q Consensus 661 ~~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (931)
..+..+..++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+|+.++||||++++++|..
T Consensus 7 ~~~~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 86 (384)
T 4fr4_A 7 DENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD 86 (384)
T ss_dssp -CCCCCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred CCCCCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 34556778999999999999999999999999999999999987654445556788899999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
...+|+|||||.||+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++..
T Consensus 87 ~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~ 164 (384)
T 4fr4_A 87 EEDMFMVVDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAM 164 (384)
T ss_dssp SSEEEEEECCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeee
Confidence 99999999999999999999864 4599999999999999999999999999999999999999999999999999964
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC---CCCCChhhHHHHHHHHHHHHcCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~ell~G~~P 897 (931)
... .....+.+||+.|+|||++.. ..++.++|||||||++|+|++|+.|
T Consensus 165 ~~~----------------------------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~P 216 (384)
T 4fr4_A 165 LPR----------------------------ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216 (384)
T ss_dssp CCT----------------------------TCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCS
T ss_pred ccC----------------------------CCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCC
Confidence 321 112345689999999999964 4588899999999999999999999
Q ss_pred CCC---CCHHHHHHHHHcCCCCCCCCCcCCh
Q 002356 898 FRG---KTRQKTFANILHKDLKFPSSTPRSK 925 (931)
Q Consensus 898 f~~---~~~~~~~~~I~~~~~~~p~~~~~~~ 925 (931)
|.+ ....+++..+......+|...+...
T Consensus 217 f~~~~~~~~~~~~~~~~~~~~~~p~~~s~~~ 247 (384)
T 4fr4_A 217 YHIRSSTSSKEIVHTFETTVVTYPSAWSQEM 247 (384)
T ss_dssp SCCCTTSCHHHHHHHHHHCCCCCCTTSCHHH
T ss_pred CCCCCCccHHHHHHHHhhcccCCCCcCCHHH
Confidence 974 4567788888888888887765443
No 32
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=5.5e-39 Score=370.72 Aligned_cols=230 Identities=35% Similarity=0.624 Sum_probs=199.7
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (931)
..+..++|++++.||+|+||.||++++..+++.||+|++.+...........+.+|+.++..++||||++++++|.+.+.
T Consensus 69 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~ 148 (437)
T 4aw2_A 69 MRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNN 148 (437)
T ss_dssp HSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSE
T ss_pred ccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCE
Confidence 34667899999999999999999999999999999999986533333334457889999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+|+|||||.||+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|.....
T Consensus 149 ~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~ 227 (437)
T 4aw2_A 149 LYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 227 (437)
T ss_dssp EEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhccc
Confidence 99999999999999999764 24599999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc-----CCCCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
.. .......+||+.|+|||++. ...++.++|||||||+||||++|++||
T Consensus 228 ~~--------------------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf 281 (437)
T 4aw2_A 228 DG--------------------------TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281 (437)
T ss_dssp TS--------------------------CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTT
T ss_pred CC--------------------------CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCC
Confidence 10 11223468999999999997 566889999999999999999999999
Q ss_pred CCCCHHHHHHHHHcC--CCCCCCC
Q 002356 899 RGKTRQKTFANILHK--DLKFPSS 920 (931)
Q Consensus 899 ~~~~~~~~~~~I~~~--~~~~p~~ 920 (931)
.+.+..+++.+|++. .+.+|..
T Consensus 282 ~~~~~~~~~~~i~~~~~~~~~p~~ 305 (437)
T 4aw2_A 282 YAESLVETYGKIMNHKERFQFPTQ 305 (437)
T ss_dssp CCSSHHHHHHHHHTHHHHCCCCSS
T ss_pred CCCChhHHHHhhhhccccccCCcc
Confidence 999999999999864 4777776
No 33
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=356.51 Aligned_cols=228 Identities=31% Similarity=0.530 Sum_probs=194.5
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++.+.||+|+||.||++.+..+++.||+|++.+.... .....+.+|+.+|+.++||||+++++++...+.+|+|
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv 86 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG--SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMV 86 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEE
Confidence 57899999999999999999999999999999999775432 2345688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
||||+|++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 87 ~E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-- 162 (347)
T 3zgw_A 87 LEYCPGGELFDYIISQD--RLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK-- 162 (347)
T ss_dssp EECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred EeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC--
Confidence 99999999999997653 49999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
.......+||+.|+|||++.+..+ +.++|||||||+||+|++|..||.+.+..++
T Consensus 163 ------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 218 (347)
T 3zgw_A 163 ------------------------DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMAL 218 (347)
T ss_dssp ---------------------------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred ------------------------CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence 012235679999999999988776 8899999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCcCCh
Q 002356 907 FANILHKDLKFPSSTPRSK 925 (931)
Q Consensus 907 ~~~I~~~~~~~p~~~~~~~ 925 (931)
+.+|..+.+.+|...+...
T Consensus 219 ~~~i~~~~~~~p~~~s~~~ 237 (347)
T 3zgw_A 219 YKKIMRGKYDVPKWLSPSS 237 (347)
T ss_dssp HHHHHHTCCCCCTTCCHHH
T ss_pred HHHHHcCCCCCCCCCCHHH
Confidence 9999999999998755443
No 34
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=365.82 Aligned_cols=229 Identities=34% Similarity=0.617 Sum_probs=198.4
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (931)
..+..++|++++.||+|+||.||+|+++.+++.||||++.+...........+.+|..+|..++||||++++++|.+.++
T Consensus 56 ~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~ 135 (412)
T 2vd5_A 56 VRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENY 135 (412)
T ss_dssp HSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSE
T ss_pred ccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCE
Confidence 34667899999999999999999999999999999999987543334445567889999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+|+|||||+||+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 136 ~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~ 214 (412)
T 2vd5_A 136 LYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRA 214 (412)
T ss_dssp EEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccC
Confidence 999999999999999998642 3599999999999999999999999999999999999999999999999999965421
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc-------CCCCCChhhHHHHHHHHHHHHcCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-------GAGHTSAVDWWALGILLYEMLYGYT 896 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-------~~~~~~~~DiwSlGvil~ell~G~~ 896 (931)
.. .......+||+.|+|||++. ...++.++|||||||++|||++|++
T Consensus 215 ~~--------------------------~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~ 268 (412)
T 2vd5_A 215 DG--------------------------TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQT 268 (412)
T ss_dssp TS--------------------------CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSC
T ss_pred CC--------------------------ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCC
Confidence 10 01123568999999999997 3568899999999999999999999
Q ss_pred CCCCCCHHHHHHHHHcC--CCCCCC
Q 002356 897 PFRGKTRQKTFANILHK--DLKFPS 919 (931)
Q Consensus 897 Pf~~~~~~~~~~~I~~~--~~~~p~ 919 (931)
||.+.+..+++.+|++. .+.+|.
T Consensus 269 Pf~~~~~~~~~~~i~~~~~~~~~p~ 293 (412)
T 2vd5_A 269 PFYADSTAETYGKIVHYKEHLSLPL 293 (412)
T ss_dssp TTCCSSHHHHHHHHHTHHHHCCCC-
T ss_pred CCCCCCHHHHHHHHHhcccCcCCCc
Confidence 99999999999999874 356664
No 35
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=7e-38 Score=353.28 Aligned_cols=222 Identities=30% Similarity=0.456 Sum_probs=197.8
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccCh---HHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+.|++.+.||+|+||.||+|.+..+++.||+|++.+...... .....+.+|+.+|+.++||||++++++|.....+
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 4689999999999999999999999999999999987543221 1346788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC----cEEEEeccCCcc
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCL 820 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g----~vkL~DFG~a~~ 820 (931)
|+|||||.|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++..
T Consensus 91 ~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~ 168 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence 9999999999999999764 4599999999999999999999999999999999999998777 799999999865
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.... ......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+
T Consensus 169 ~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~ 220 (361)
T 2yab_A 169 IEDG----------------------------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220 (361)
T ss_dssp CCTT----------------------------CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred cCCC----------------------------CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 3210 112345799999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCC
Q 002356 901 KTRQKTFANILHKDLKFPS 919 (931)
Q Consensus 901 ~~~~~~~~~I~~~~~~~p~ 919 (931)
.+..+++.+|..+.+.+|.
T Consensus 221 ~~~~~~~~~i~~~~~~~~~ 239 (361)
T 2yab_A 221 DTKQETLANITAVSYDFDE 239 (361)
T ss_dssp SSHHHHHHHHHTTCCCCCH
T ss_pred CCHHHHHHHHHhcCCCCCc
Confidence 9999999999999888774
No 36
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=8.5e-38 Score=348.14 Aligned_cols=233 Identities=43% Similarity=0.760 Sum_probs=194.7
Q ss_pred cccCCCccccccccccCcEEEEEEEEe---cCCeEEEEEEeeccccc-ChHHHHHHHHHHHHHHhcCCCCccceeEEEEe
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~---~~~~~~AvK~~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (931)
.+..++|++.+.||+|+||.||+|++. .+++.||+|++.+.... .......+.+|+.+|+.++||||+++++++..
T Consensus 13 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 92 (327)
T 3a62_A 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT 92 (327)
T ss_dssp CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC
T ss_pred CCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc
Confidence 456789999999999999999999985 68999999999875332 22344567789999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
.+.+|+|||||.|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++..
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 93 GGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp SSCEEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred CCEEEEEEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 99999999999999999999864 3489999999999999999999999999999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.... .......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+
T Consensus 171 ~~~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 223 (327)
T 3a62_A 171 SIHD---------------------------GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223 (327)
T ss_dssp -----------------------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccC---------------------------CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCC
Confidence 2110 1122356799999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCcCChh
Q 002356 901 KTRQKTFANILHKDLKFPSSTPRSKE 926 (931)
Q Consensus 901 ~~~~~~~~~I~~~~~~~p~~~~~~~~ 926 (931)
.+..+++.+|.++.+.+|...+....
T Consensus 224 ~~~~~~~~~i~~~~~~~p~~~~~~~~ 249 (327)
T 3a62_A 224 ENRKKTIDKILKCKLNLPPYLTQEAR 249 (327)
T ss_dssp SSHHHHHHHHHHTCCCCCTTSCHHHH
T ss_pred CCHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999999999877654433
No 37
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=8.8e-38 Score=368.66 Aligned_cols=235 Identities=30% Similarity=0.559 Sum_probs=205.5
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+..++|.+.+.||+|+||.||+|++..+++.||||++.+...........+.+|+.+|+.++||||++++++|.....+
T Consensus 181 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l 260 (543)
T 3c4z_A 181 PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDL 260 (543)
T ss_dssp CCCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred cCChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEE
Confidence 35567999999999999999999999999999999999876544444567788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 745 CLITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
|+||||++||+|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++....
T Consensus 261 ~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp EEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999999997643 3469999999999999999999999999999999999999999999999999996532
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCC-
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK- 901 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~- 901 (931)
.. .......+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.
T Consensus 341 ~~---------------------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~ 393 (543)
T 3c4z_A 341 AG---------------------------QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393 (543)
T ss_dssp TT---------------------------CCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTT
T ss_pred CC---------------------------CcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCc
Confidence 11 01123468999999999999999999999999999999999999999875
Q ss_pred ---CHHHHHHHHHcCCCCCCCCCcCChh
Q 002356 902 ---TRQKTFANILHKDLKFPSSTPRSKE 926 (931)
Q Consensus 902 ---~~~~~~~~I~~~~~~~p~~~~~~~~ 926 (931)
...++++.|+.+...+|...+....
T Consensus 394 ~~~~~~~~~~~i~~~~~~~p~~~s~~~~ 421 (543)
T 3c4z_A 394 EKVENKELKQRVLEQAVTYPDKFSPASK 421 (543)
T ss_dssp CCCCHHHHHHHHHHCCCCCCTTSCHHHH
T ss_pred cchhHHHHHHHHhhcccCCCcccCHHHH
Confidence 4578899999999999977654443
No 38
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=6.3e-38 Score=364.37 Aligned_cols=233 Identities=39% Similarity=0.764 Sum_probs=195.9
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (931)
..+..++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+|+.++||||+++++++...+.
T Consensus 143 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 222 (446)
T 4ejn_A 143 HRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDR 222 (446)
T ss_dssp -CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTE
T ss_pred cCCChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCE
Confidence 34567799999999999999999999999999999999987654455566778889999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
+|+|||||+|++|.+++... ..+++..++.++.||+.||.|||+ +||+||||||+|||++.++.+||+|||++....
T Consensus 223 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 223 LCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp EEEEECCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EEEEEeeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 99999999999999999875 359999999999999999999998 999999999999999999999999999985421
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
.. .......+||+.|+|||++.+..++.++|||||||+||+|++|+.||.+.+
T Consensus 301 ~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 353 (446)
T 4ejn_A 301 KD---------------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 353 (446)
T ss_dssp C--------------------------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CC---------------------------CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence 10 112235689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCcCCh
Q 002356 903 RQKTFANILHKDLKFPSSTPRSK 925 (931)
Q Consensus 903 ~~~~~~~I~~~~~~~p~~~~~~~ 925 (931)
..+++..|..+.+.+|...+...
T Consensus 354 ~~~~~~~i~~~~~~~p~~~~~~~ 376 (446)
T 4ejn_A 354 HEKLFELILMEEIRFPRTLGPEA 376 (446)
T ss_dssp HHHHHHHHHHCCCCCCTTSCHHH
T ss_pred HHHHHHHHHhCCCCCCccCCHHH
Confidence 99999999999999987755433
No 39
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.4e-37 Score=339.08 Aligned_cols=220 Identities=23% Similarity=0.354 Sum_probs=190.8
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
..++|++++.||+|+||.||++.+..+++.||+|.+.............+.+|+.+++.++||||+++++++...+.+|+
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 88 (294)
T 4eqm_A 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL 88 (294)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence 45789999999999999999999999999999999977655566677889999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
||||++|++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 89 v~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 164 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET-- 164 (294)
T ss_dssp EEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred EEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccc--
Confidence 999999999999998753 4999999999999999999999999999999999999999999999999998654211
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
.........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus 165 ------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~ 220 (294)
T 4eqm_A 165 ------------------------SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI 220 (294)
T ss_dssp ----------------------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH
T ss_pred ------------------------cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 01122345799999999999999999999999999999999999999999888777
Q ss_pred HHHHHcCC
Q 002356 907 FANILHKD 914 (931)
Q Consensus 907 ~~~I~~~~ 914 (931)
..++..+.
T Consensus 221 ~~~~~~~~ 228 (294)
T 4eqm_A 221 AIKHIQDS 228 (294)
T ss_dssp HHHHHSSC
T ss_pred HHHHhhcc
Confidence 66665554
No 40
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.6e-37 Score=348.00 Aligned_cols=222 Identities=29% Similarity=0.496 Sum_probs=197.9
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 4579999999999999999999999999999999976533 345567788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC---cEEEEeccCCcccCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCLTSCK 824 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g---~vkL~DFG~a~~~~~~ 824 (931)
||||.|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++......
T Consensus 107 ~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp ECCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred EecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 9999999999999764 4599999999999999999999999999999999999998654 5999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
.......||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..
T Consensus 185 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~ 236 (362)
T 2bdw_A 185 ----------------------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 236 (362)
T ss_dssp ----------------------------CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ----------------------------cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH
Confidence 1123457999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCC
Q 002356 905 KTFANILHKDLKFPSS 920 (931)
Q Consensus 905 ~~~~~I~~~~~~~p~~ 920 (931)
+++..|..+.+.+|..
T Consensus 237 ~~~~~i~~~~~~~~~~ 252 (362)
T 2bdw_A 237 RLYAQIKAGAYDYPSP 252 (362)
T ss_dssp HHHHHHHHTCCCCCTT
T ss_pred HHHHHHHhCCCCCCcc
Confidence 9999999999888754
No 41
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=357.15 Aligned_cols=223 Identities=28% Similarity=0.464 Sum_probs=196.9
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++.+.||+|+||.||+|.+..+++.||+|++.+... .......+.+|+.+|+.++||||+++++++...+..|+|
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC-HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 4689999999999999999999999999999999987543 334556788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEe---cCCcEEEEeccCCcccCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ---GNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~---~~g~vkL~DFG~a~~~~~~ 824 (931)
||||.||+|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 89 ~E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~ 166 (444)
T 3soa_A 89 FDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166 (444)
T ss_dssp ECCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred EEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence 9999999999999875 3499999999999999999999999999999999999998 4578999999999654211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
........||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..
T Consensus 167 ---------------------------~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~ 219 (444)
T 3soa_A 167 ---------------------------QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH 219 (444)
T ss_dssp ---------------------------CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred ---------------------------CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH
Confidence 11123467999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCC
Q 002356 905 KTFANILHKDLKFPSS 920 (931)
Q Consensus 905 ~~~~~I~~~~~~~p~~ 920 (931)
+++.+|..+.+.+|..
T Consensus 220 ~~~~~i~~~~~~~~~~ 235 (444)
T 3soa_A 220 RLYQQIKAGAYDFPSP 235 (444)
T ss_dssp HHHHHHHHTCCCCCTT
T ss_pred HHHHHHHhCCCCCCcc
Confidence 9999999998877754
No 42
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.1e-37 Score=379.31 Aligned_cols=233 Identities=35% Similarity=0.677 Sum_probs=205.6
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCe
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (931)
.+..++|++++.||+|+||.||++.+..+++.||||++.+...........+..|..+|..+ +||+|+.++++|...+.
T Consensus 337 ~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~ 416 (674)
T 3pfq_A 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 416 (674)
T ss_dssp ---CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE
T ss_pred cccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE
Confidence 45678999999999999999999999999999999999876444445567788899999988 79999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+||||||++||+|..++... ..+++..++.|+.||+.||.|||++|||||||||+||||+.+|.+||+|||++.....
T Consensus 417 ~~lV~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 417 LYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEEEeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 99999999999999999875 3499999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
. .....+.+||+.|+|||++.+..|+.++|||||||+||||++|++||.+.+.
T Consensus 495 ~---------------------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~ 547 (674)
T 3pfq_A 495 D---------------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 547 (674)
T ss_dssp T---------------------------TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred C---------------------------CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH
Confidence 0 1123467899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCcCChh
Q 002356 904 QKTFANILHKDLKFPSSTPRSKE 926 (931)
Q Consensus 904 ~~~~~~I~~~~~~~p~~~~~~~~ 926 (931)
.+++++|+++.+.+|...+..+.
T Consensus 548 ~~~~~~i~~~~~~~p~~~s~~~~ 570 (674)
T 3pfq_A 548 DELFQSIMEHNVAYPKSMSKEAV 570 (674)
T ss_dssp HHHHHHHHSSCCCCCTTSCHHHH
T ss_pred HHHHHHHHhCCCCCCccCCHHHH
Confidence 99999999999999987554433
No 43
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.6e-37 Score=367.48 Aligned_cols=233 Identities=32% Similarity=0.560 Sum_probs=203.8
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+..++|.+.+.||+|+||.||+|.+..+++.||||++.+...........+.+|+.+|+.++||||+++++++...+.+
T Consensus 180 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l 259 (576)
T 2acx_A 180 PVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDAL 259 (576)
T ss_dssp CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred CccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEE
Confidence 35678899999999999999999999999999999999875443444556788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+||||++||+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 260 ~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp EEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999999998765556999999999999999999999999999999999999999999999999999643210
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCC---
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK--- 901 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~--- 901 (931)
......+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.
T Consensus 340 ----------------------------~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~ 391 (576)
T 2acx_A 340 ----------------------------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391 (576)
T ss_dssp ----------------------------CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC
T ss_pred ----------------------------ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccc
Confidence 1123457999999999999989999999999999999999999999875
Q ss_pred -CHHHHHHHHHcCCCCCCCCCcCCh
Q 002356 902 -TRQKTFANILHKDLKFPSSTPRSK 925 (931)
Q Consensus 902 -~~~~~~~~I~~~~~~~p~~~~~~~ 925 (931)
...++...+......+|...+...
T Consensus 392 ~~~~~i~~~i~~~~~~~p~~~s~~~ 416 (576)
T 2acx_A 392 IKREEVERLVKEVPEEYSERFSPQA 416 (576)
T ss_dssp CCHHHHHHHHHHCCCCCCTTSCHHH
T ss_pred hhHHHHHHHhhcccccCCccCCHHH
Confidence 457788888888888887655443
No 44
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=5.7e-37 Score=336.62 Aligned_cols=212 Identities=25% Similarity=0.432 Sum_probs=188.6
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++.+.||+|+||.||++.+..+++.||+|.+..... .....+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc---cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 4689999999999999999999999999999999876532 2345678999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
||||.|++|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 96 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 169 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--- 169 (297)
T ss_dssp EECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST---
T ss_pred EECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCc---
Confidence 9999999999999874 4899999999999999999999999999999999999999999999999998554211
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+
T Consensus 170 ------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~ 225 (297)
T 3fxz_A 170 ------------------------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225 (297)
T ss_dssp ------------------------TCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred ------------------------ccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 11223567999999999999999999999999999999999999999998887777
Q ss_pred HHHHc
Q 002356 908 ANILH 912 (931)
Q Consensus 908 ~~I~~ 912 (931)
..+..
T Consensus 226 ~~~~~ 230 (297)
T 3fxz_A 226 YLIAT 230 (297)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66654
No 45
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6e-37 Score=340.37 Aligned_cols=219 Identities=25% Similarity=0.401 Sum_probs=195.8
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++.+.||+|+||.||+|.+..+++.||+|.+... ......+.+|+.+|+.++||||+++++++...+.+|+|
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC----THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC----cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 46899999999999999999999999999999998653 23446678999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec--CCcEEEEeccCCcccCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~--~g~vkL~DFG~a~~~~~~~ 825 (931)
||||+|++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++......
T Consensus 80 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~- 157 (321)
T 1tki_A 80 FEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG- 157 (321)
T ss_dssp ECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT-
T ss_pred EEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC-
Confidence 99999999999997642 35999999999999999999999999999999999999987 789999999998653210
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
.......||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+
T Consensus 158 ---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~ 210 (321)
T 1tki_A 158 ---------------------------DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ 210 (321)
T ss_dssp ---------------------------CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred ---------------------------CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH
Confidence 11234579999999999998888999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCC
Q 002356 906 TFANILHKDLKFPS 919 (931)
Q Consensus 906 ~~~~I~~~~~~~p~ 919 (931)
++..+.++.+.+|.
T Consensus 211 ~~~~i~~~~~~~~~ 224 (321)
T 1tki_A 211 IIENIMNAEYTFDE 224 (321)
T ss_dssp HHHHHHHTCCCCCH
T ss_pred HHHHHHcCCCCCCh
Confidence 99999999887764
No 46
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.2e-38 Score=350.24 Aligned_cols=227 Identities=31% Similarity=0.496 Sum_probs=194.8
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
..++|.+.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+|+.++||||+++++++...+..|+
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 35789999999999999999999999999999999976543333334578899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
||||+ +|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 87 v~E~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~-- 161 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG-- 161 (336)
T ss_dssp EECCC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS--
T ss_pred EEECC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC--
Confidence 99999 88999998765 34999999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
......+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+....+
T Consensus 162 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~ 215 (336)
T 3h4j_B 162 --------------------------NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN 215 (336)
T ss_dssp --------------------------BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT
T ss_pred --------------------------cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH
Confidence 12234579999999999988776 679999999999999999999999877666
Q ss_pred HHHHHHcCCCCCCCCCcCC
Q 002356 906 TFANILHKDLKFPSSTPRS 924 (931)
Q Consensus 906 ~~~~I~~~~~~~p~~~~~~ 924 (931)
+++++..+.+.+|...+..
T Consensus 216 ~~~~i~~~~~~~p~~~s~~ 234 (336)
T 3h4j_B 216 LFKKVNSCVYVMPDFLSPG 234 (336)
T ss_dssp CBCCCCSSCCCCCTTSCHH
T ss_pred HHHHHHcCCCCCcccCCHH
Confidence 6666666666777655433
No 47
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=338.15 Aligned_cols=222 Identities=29% Similarity=0.460 Sum_probs=196.1
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccCh---HHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+.|.+.+.||+|+||.||+|.+..+++.||+|++.+...... .....+.+|+.+|+.++||||+++++++.....+
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 3579999999999999999999999999999999976533211 1356788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC----cEEEEeccCCcc
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCL 820 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g----~vkL~DFG~a~~ 820 (931)
|+||||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++..
T Consensus 90 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 167 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence 9999999999999999764 4599999999999999999999999999999999999998877 799999999865
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 168 ~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 219 (326)
T 2y0a_A 168 IDFG----------------------------NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219 (326)
T ss_dssp CCTT----------------------------SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred CCCC----------------------------CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCC
Confidence 4211 112345799999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCC
Q 002356 901 KTRQKTFANILHKDLKFPS 919 (931)
Q Consensus 901 ~~~~~~~~~I~~~~~~~p~ 919 (931)
.+..+.+..+....+.+|.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~ 238 (326)
T 2y0a_A 220 DTKQETLANVSAVNYEFED 238 (326)
T ss_dssp SSHHHHHHHHHHTCCCCCH
T ss_pred CCHHHHHHHHHhcCCCcCc
Confidence 9999999999888877764
No 48
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4e-37 Score=358.77 Aligned_cols=231 Identities=28% Similarity=0.461 Sum_probs=203.8
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+..++|.+.+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+|+.++||||+++++++...+.+
T Consensus 12 ~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 91 (476)
T 2y94_A 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDI 91 (476)
T ss_dssp CCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred CceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 45678999999999999999999999999999999999865433334456788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+|||||+|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 92 ~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 92 FMVMEYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp EEEEECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred EEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 9999999999999999764 45999999999999999999999999999999999999999999999999998653210
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
....+.+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.+.
T Consensus 170 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~ 221 (476)
T 2y94_A 170 ----------------------------EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV 221 (476)
T ss_dssp ----------------------------CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS
T ss_pred ----------------------------ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH
Confidence 11234579999999999988766 6799999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCcCCh
Q 002356 904 QKTFANILHKDLKFPSSTPRSK 925 (931)
Q Consensus 904 ~~~~~~I~~~~~~~p~~~~~~~ 925 (931)
..++.+|..+.+.+|...+...
T Consensus 222 ~~~~~~i~~~~~~~p~~~s~~~ 243 (476)
T 2y94_A 222 PTLFKKICDGIFYTPQYLNPSV 243 (476)
T ss_dssp HHHHHHHHTTCCCCCTTCCHHH
T ss_pred HHHHHHHhcCCcCCCccCCHHH
Confidence 9999999999988887655433
No 49
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.1e-37 Score=335.18 Aligned_cols=234 Identities=29% Similarity=0.538 Sum_probs=192.7
Q ss_pred cccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccC-----------------------hHHHHHHHHH
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----------------------RNKVHRACAE 719 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~-----------------------~~~~~~~~~E 719 (931)
+..+..++|++.+.||+|+||.||++.+..+++.||+|++.+..... ......+.+|
T Consensus 7 ~~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 86 (298)
T 2zv2_A 7 GDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQE 86 (298)
T ss_dssp ---CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHH
T ss_pred CCceeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHH
Confidence 34456789999999999999999999999999999999997653221 1224568899
Q ss_pred HHHHHhcCCCCccceeEEEEe--CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q 002356 720 REILDMLDHPFVPALYASFQT--KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 797 (931)
Q Consensus 720 ~~il~~l~hpnIv~l~~~~~~--~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDI 797 (931)
+.+|+.++||||+++++++.. ...+|+||||+++++|.+++.. ..+++..++.++.||+.||.|||++||+||||
T Consensus 87 ~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dl 163 (298)
T 2zv2_A 87 IAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDI 163 (298)
T ss_dssp HHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred HHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence 999999999999999999986 6789999999999999886543 45999999999999999999999999999999
Q ss_pred CCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC---
Q 002356 798 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--- 874 (931)
Q Consensus 798 KP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~--- 874 (931)
||+|||++.++.+||+|||++....... .......||+.|+|||++.+..
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ 216 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSD---------------------------ALLSNTVGTPAFMAPESLSETRKIF 216 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSS---------------------------CEECCCCSCGGGCCGGGCCTTCCCE
T ss_pred CHHHEEECCCCCEEEecCCCcccccccc---------------------------ccccCCcCCccccChhhhccCCCCC
Confidence 9999999999999999999986542110 1122457999999999997765
Q ss_pred CCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCcCChh
Q 002356 875 HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPRSKE 926 (931)
Q Consensus 875 ~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~~~~~p~~~~~~~~ 926 (931)
++.++|||||||++|+|++|+.||.+.+...+...+..+.+.+|.....+..
T Consensus 217 ~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (298)
T 2zv2_A 217 SGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAED 268 (298)
T ss_dssp ESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHH
T ss_pred CCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCccccCHH
Confidence 3678999999999999999999999999999999999888888875544443
No 50
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.5e-36 Score=329.01 Aligned_cols=228 Identities=30% Similarity=0.507 Sum_probs=180.6
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
..++|++++.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+..++
T Consensus 11 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (275)
T 2eue_A 11 HIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp BCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEE
T ss_pred cccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEE
Confidence 35689999999999999999999999999999999987655455556788899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
||||+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 91 v~e~~-~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 165 (275)
T 2eue_A 91 VIEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-- 165 (275)
T ss_dssp EEECC-CEEHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred Eehhc-CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCc--
Confidence 99999 88898888765 34999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
.......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.+...
T Consensus 166 --------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 219 (275)
T 2eue_A 166 --------------------------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV 219 (275)
T ss_dssp -----------------------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred --------------------------ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 11224469999999999988766 689999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCcCCh
Q 002356 906 TFANILHKDLKFPSSTPRSK 925 (931)
Q Consensus 906 ~~~~I~~~~~~~p~~~~~~~ 925 (931)
+...+..+...+|...+...
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~ 239 (275)
T 2eue_A 220 LFKNISNGVYTLPKFLSPGA 239 (275)
T ss_dssp HHHHHHHTCCCCCTTSCHHH
T ss_pred HHHHHHhCCCCCCccCCHHH
Confidence 99999999999887765443
No 51
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=8.8e-37 Score=331.46 Aligned_cols=230 Identities=34% Similarity=0.559 Sum_probs=201.7
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
+...++|++.+.||+|+||.||++.+..++..||+|++.+...........+.+|+.+++.++||||+++++++......
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 84 (279)
T 3fdn_A 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRV 84 (279)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred eeecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEE
Confidence 34567999999999999999999999999999999999765443344456788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
++||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++.....
T Consensus 85 ~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~- 161 (279)
T 3fdn_A 85 YLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS- 161 (279)
T ss_dssp EEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCc-
Confidence 9999999999999999865 3499999999999999999999999999999999999999999999999998843221
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus 162 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 213 (279)
T 3fdn_A 162 ----------------------------SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213 (279)
T ss_dssp ----------------------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred ----------------------------ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH
Confidence 1112456899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCcCCh
Q 002356 905 KTFANILHKDLKFPSSTPRSK 925 (931)
Q Consensus 905 ~~~~~I~~~~~~~p~~~~~~~ 925 (931)
+.+..+....+.+|...+...
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~ 234 (279)
T 3fdn_A 214 ETYKRISRVEFTFPDFVTEGA 234 (279)
T ss_dssp HHHHHHHHTCCCCCTTSCHHH
T ss_pred HHHHHHHhCCCCCCCcCCHHH
Confidence 999999999999888765443
No 52
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=4.6e-37 Score=339.46 Aligned_cols=225 Identities=23% Similarity=0.351 Sum_probs=188.9
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC----
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT---- 742 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~---- 742 (931)
..++|++.+.||+|+||.||++.+..+++.||+|++.............+.+|+.+++.++||||+++++++....
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 3578999999999999999999999999999999998765556666778899999999999999999999987543
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
..|+||||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred ccEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 459999999999999999865 349999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
.... .........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+
T Consensus 168 ~~~~------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~ 223 (311)
T 3ork_A 168 DSGN------------------------SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223 (311)
T ss_dssp --------------------------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccc------------------------ccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 1110 0112234679999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHcCCCCC
Q 002356 903 RQKTFANILHKDLKF 917 (931)
Q Consensus 903 ~~~~~~~I~~~~~~~ 917 (931)
..+...++..+....
T Consensus 224 ~~~~~~~~~~~~~~~ 238 (311)
T 3ork_A 224 PVSVAYQHVREDPIP 238 (311)
T ss_dssp HHHHHHHHHHCCCCC
T ss_pred hHHHHHHHhcCCCCC
Confidence 888877777665433
No 53
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.7e-36 Score=341.09 Aligned_cols=225 Identities=25% Similarity=0.426 Sum_probs=192.0
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccC--hHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN--RNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (931)
+..++|++.+.||+|+||.||+|.+..+++.||+|++....... ......+.+|+.+++.++||||+++++++...+.
T Consensus 21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 100 (351)
T 3c0i_A 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGM 100 (351)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 34568999999999999999999999999999999987543211 1235678899999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc---EEEEeccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLS 818 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~---vkL~DFG~a 818 (931)
+|+|||||+|++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||++
T Consensus 101 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 99999999999999887643 2345899999999999999999999999999999999999986654 999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
...... .......+||+.|+|||++.+..++.++|||||||++|+|++|.+||
T Consensus 181 ~~~~~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf 233 (351)
T 3c0i_A 181 IQLGES---------------------------GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233 (351)
T ss_dssp EECCTT---------------------------SCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred eEecCC---------------------------CeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCC
Confidence 654311 01123457999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCCCCC
Q 002356 899 RGKTRQKTFANILHKDLKFP 918 (931)
Q Consensus 899 ~~~~~~~~~~~I~~~~~~~p 918 (931)
.+. ..+++..+.++.+.++
T Consensus 234 ~~~-~~~~~~~i~~~~~~~~ 252 (351)
T 3c0i_A 234 YGT-KERLFEGIIKGKYKMN 252 (351)
T ss_dssp CSS-HHHHHHHHHHTCCCCC
T ss_pred CCc-HHHHHHHHHcCCCCCC
Confidence 874 5678888888877665
No 54
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.6e-36 Score=339.18 Aligned_cols=220 Identities=26% Similarity=0.438 Sum_probs=194.1
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-----CCCccceeEEE
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-----HPFVPALYASF 738 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-----hpnIv~l~~~~ 738 (931)
..+..++|.+++.||+|+||.||+|.+..+++.||+|++... .........|+.+++.+. ||||+++++++
T Consensus 30 g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~ 105 (360)
T 3llt_A 30 GMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKF 105 (360)
T ss_dssp TCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEE
T ss_pred ceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc----hhhhhhhHHHHHHHHHhcccCCCCCCeeccccee
Confidence 345578999999999999999999999999999999998642 344566778999999996 99999999999
Q ss_pred EeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec------------
Q 002356 739 QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG------------ 806 (931)
Q Consensus 739 ~~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~------------ 806 (931)
...+..|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 106 ~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~ 184 (360)
T 3llt_A 106 MYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRR 184 (360)
T ss_dssp EETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEEC
T ss_pred eECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhc
Confidence 9999999999999 999999998876566999999999999999999999999999999999999975
Q ss_pred -------------CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC
Q 002356 807 -------------NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA 873 (931)
Q Consensus 807 -------------~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~ 873 (931)
++.+||+|||++..... ......||+.|+|||++.+.
T Consensus 185 ~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~ 234 (360)
T 3llt_A 185 VTDGKKIQIYRTKSTGIKLIDFGCATFKSD------------------------------YHGSIINTRQYRAPEVILNL 234 (360)
T ss_dssp TTTCCEEEEEEESCCCEEECCCTTCEETTS------------------------------CCCSCCSCGGGCCHHHHTTC
T ss_pred ccccccccccccCCCCEEEEeccCceecCC------------------------------CCcCccCcccccCcHHHcCC
Confidence 78999999999854321 12345799999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCC
Q 002356 874 GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP 918 (931)
Q Consensus 874 ~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~~~~~p 918 (931)
.++.++|||||||++|+|++|++||.+.+..+.+..+......+|
T Consensus 235 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p 279 (360)
T 3llt_A 235 GWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIP 279 (360)
T ss_dssp CCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCC
T ss_pred CCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999888888876554444
No 55
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3.9e-36 Score=339.40 Aligned_cols=229 Identities=29% Similarity=0.437 Sum_probs=188.7
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
...++|++++.||+|+||.||++.+..+++.||+|++.+... ....+.+|+.+++.++||||+++++++.....+|
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 92 (361)
T 3uc3_A 17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA----IDENVQREIINHRSLRHPNIVRFKEVILTPTHLA 92 (361)
T ss_dssp CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT----SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc----ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEE
Confidence 456899999999999999999999999999999999976432 2245778999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc--EEEEeccCCcccCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--VSLTDFDLSCLTSC 823 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~--vkL~DFG~a~~~~~ 823 (931)
+|||||.|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||++.....
T Consensus 93 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 93 IIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred EEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 999999999999999764 34999999999999999999999999999999999999987665 99999999853210
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCCh-hhHHHHHHHHHHHHcCCCCCCCC-
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA-VDWWALGILLYEMLYGYTPFRGK- 901 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~-~DiwSlGvil~ell~G~~Pf~~~- 901 (931)
.......+||+.|+|||++.+..++.+ +|||||||++|+|++|++||.+.
T Consensus 171 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 222 (361)
T 3uc3_A 171 ----------------------------HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 222 (361)
T ss_dssp --------------------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC---
T ss_pred ----------------------------cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCc
Confidence 011234579999999999988887665 89999999999999999999874
Q ss_pred ---CHHHHHHHHHcCCCCCCCCCcCChhhh
Q 002356 902 ---TRQKTFANILHKDLKFPSSTPRSKEQI 928 (931)
Q Consensus 902 ---~~~~~~~~I~~~~~~~p~~~~~~~~~~ 928 (931)
....+++.+....+.+|.....+....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 252 (361)
T 3uc3_A 223 EPRDYRKTIQRILSVKYSIPDDIRISPECC 252 (361)
T ss_dssp -CCCHHHHHHHHHTTCCCCCTTSCCCHHHH
T ss_pred cHHHHHHHHHHHhcCCCCCCCcCCCCHHHH
Confidence 346777788888888888765555443
No 56
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.6e-36 Score=340.81 Aligned_cols=233 Identities=21% Similarity=0.349 Sum_probs=197.9
Q ss_pred cccCCCccccccccccCcEEEEEEEEec-------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 736 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~-------~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~ 736 (931)
.+..++|++.+.||+|+||.||++.+.. ++..||+|++.... .......+.+|+.+|+.+ +||||+++++
T Consensus 77 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~ 154 (370)
T 2psq_A 77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLG 154 (370)
T ss_dssp BCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEE
T ss_pred cccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence 4567899999999999999999999753 45689999997642 345567889999999999 8999999999
Q ss_pred EEEeCCeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcE
Q 002356 737 SFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (931)
Q Consensus 737 ~~~~~~~~~lVmE~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NI 802 (931)
++...+.+|+||||+.+|+|.+++.... ...++...+..++.||+.||.|||++||+||||||+||
T Consensus 155 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI 234 (370)
T 2psq_A 155 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 234 (370)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred EEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhE
Confidence 9999999999999999999999998643 23489999999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHH
Q 002356 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (931)
Q Consensus 803 ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~Diw 882 (931)
|++.++.+||+|||++........ ........||+.|+|||++.+..++.++|||
T Consensus 235 ll~~~~~~kl~DFG~a~~~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvw 289 (370)
T 2psq_A 235 LVTENNVMKIADFGLARDINNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 289 (370)
T ss_dssp EECTTCCEEECCCSSCEETTCCCT-------------------------TCTTTTTTSCGGGCCHHHHHTCCCCHHHHHH
T ss_pred EECCCCCEEEccccCCcccCcccc-------------------------eecccCCCcccceECHhHhcCCCCCcHHHHH
Confidence 999999999999999964431110 1112334678999999999999999999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCcCC
Q 002356 883 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKD-LKFPSSTPRS 924 (931)
Q Consensus 883 SlGvil~ell~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~~~~ 924 (931)
||||++|+|++ |..||.+.+..+++..+..+. ...|...+..
T Consensus 290 slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (370)
T 2psq_A 290 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNE 333 (370)
T ss_dssp HHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTSCHH
T ss_pred HHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHH
Confidence 99999999998 999999999888988888764 4566555443
No 57
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.8e-36 Score=328.32 Aligned_cols=228 Identities=31% Similarity=0.545 Sum_probs=201.9
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
+..++|++.+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+..|
T Consensus 11 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 90 (284)
T 2vgo_A 11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIY 90 (284)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEE
Confidence 55679999999999999999999999999999999997654333334567889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
+||||+++++|.+++.... .+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 91 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~-- 166 (284)
T 2vgo_A 91 LMLEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-- 166 (284)
T ss_dssp EEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSS--
T ss_pred EEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcc--
Confidence 9999999999999998753 499999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||...+..+
T Consensus 167 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 219 (284)
T 2vgo_A 167 ---------------------------LRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219 (284)
T ss_dssp ---------------------------SCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred ---------------------------cccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH
Confidence 11224579999999999999989999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCcCC
Q 002356 906 TFANILHKDLKFPSSTPRS 924 (931)
Q Consensus 906 ~~~~I~~~~~~~p~~~~~~ 924 (931)
....+....+.+|...+..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~ 238 (284)
T 2vgo_A 220 THRRIVNVDLKFPPFLSDG 238 (284)
T ss_dssp HHHHHHTTCCCCCTTSCHH
T ss_pred HHHHHhccccCCCCcCCHH
Confidence 9999999988888765543
No 58
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=336.74 Aligned_cols=233 Identities=25% Similarity=0.353 Sum_probs=195.7
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCC---eEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~---~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (931)
..+..++|++.+.||+|+||.||++.+..++ ..||+|.+.... .......+.+|+.+|+.++||||+++++++..
T Consensus 44 ~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 121 (325)
T 3kul_A 44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQFDHPNIIRLEGVVTR 121 (325)
T ss_dssp CBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG
T ss_pred cccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 3466789999999999999999999997554 469999997542 34456778999999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
.+..|+||||++|++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 122 GRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp GGCCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred CCccEEEeeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 999999999999999999997543 4599999999999999999999999999999999999999999999999999965
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 899 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~ 899 (931)
....... ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus 201 ~~~~~~~------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~ 256 (325)
T 3kul_A 201 LEDDPDA------------------------AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW 256 (325)
T ss_dssp CC----C------------------------CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred cccCccc------------------------eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcc
Confidence 4321110 011123356889999999998889999999999999999998 999999
Q ss_pred CCCHHHHHHHHHcC-CCCCCCCCcC
Q 002356 900 GKTRQKTFANILHK-DLKFPSSTPR 923 (931)
Q Consensus 900 ~~~~~~~~~~I~~~-~~~~p~~~~~ 923 (931)
+.+..+++..+..+ .+..|...+.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (325)
T 3kul_A 257 NMTNRDVISSVEEGYRLPAPMGCPH 281 (325)
T ss_dssp TSCHHHHHHHHHTTCCCCCCTTCCH
T ss_pred cCCHHHHHHHHHcCCCCCCCCCcCH
Confidence 99999999988876 3455554443
No 59
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=8.9e-36 Score=326.09 Aligned_cols=229 Identities=26% Similarity=0.466 Sum_probs=204.5
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
..++|.+.+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+..|+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 45789999999999999999999999999999999987765566677888999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 93 v~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~-- 168 (294)
T 2rku_A 93 VLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD-- 168 (294)
T ss_dssp EEECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCST--
T ss_pred EEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccC--
Confidence 99999999999998764 34999999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus 169 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~ 223 (294)
T 2rku_A 169 -------------------------GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 223 (294)
T ss_dssp -------------------------TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred -------------------------ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 0112345799999999999998899999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCcCC
Q 002356 907 FANILHKDLKFPSSTPRS 924 (931)
Q Consensus 907 ~~~I~~~~~~~p~~~~~~ 924 (931)
+..+..+.+.+|...+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~ 241 (294)
T 2rku_A 224 YLRIKKNEYSIPKHINPV 241 (294)
T ss_dssp HHHHHTTCCCCCTTSCHH
T ss_pred HHHHhhccCCCccccCHH
Confidence 999999888888765543
No 60
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=4.5e-36 Score=341.64 Aligned_cols=221 Identities=28% Similarity=0.433 Sum_probs=195.1
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.+|+.++||||+++++++.....+|+|
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc---hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 468999999999999999999999999999999987642 33456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec--CCcEEEEeccCCcccCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~--~g~vkL~DFG~a~~~~~~~ 825 (931)
||||.|++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++......
T Consensus 127 ~E~~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~- 204 (387)
T 1kob_A 127 LEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD- 204 (387)
T ss_dssp EECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT-
T ss_pred EEcCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCC-
Confidence 99999999999987542 35999999999999999999999999999999999999974 467999999998654211
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+
T Consensus 205 ---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~ 257 (387)
T 1kob_A 205 ---------------------------EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE 257 (387)
T ss_dssp ---------------------------SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH
T ss_pred ---------------------------cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH
Confidence 11123469999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCC
Q 002356 906 TFANILHKDLKFPSS 920 (931)
Q Consensus 906 ~~~~I~~~~~~~p~~ 920 (931)
.+..+..+...++..
T Consensus 258 ~~~~i~~~~~~~~~~ 272 (387)
T 1kob_A 258 TLQNVKRCDWEFDED 272 (387)
T ss_dssp HHHHHHHCCCCCCSS
T ss_pred HHHHHHhCCCCCCcc
Confidence 999999888776654
No 61
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=6.3e-36 Score=334.07 Aligned_cols=230 Identities=26% Similarity=0.460 Sum_probs=205.2
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
...++|.+.+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+..|
T Consensus 38 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 117 (335)
T 2owb_A 38 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF 117 (335)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred ccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEE
Confidence 34578999999999999999999999999999999998776656667788899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
+||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 118 lv~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~- 194 (335)
T 2owb_A 118 VVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD- 194 (335)
T ss_dssp EEECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCST-
T ss_pred EEEecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccC-
Confidence 999999999999998764 34999999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+
T Consensus 195 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 248 (335)
T 2owb_A 195 --------------------------GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE 248 (335)
T ss_dssp --------------------------TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred --------------------------cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH
Confidence 011234579999999999999989999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCcCC
Q 002356 906 TFANILHKDLKFPSSTPRS 924 (931)
Q Consensus 906 ~~~~I~~~~~~~p~~~~~~ 924 (931)
.+..+..+.+.+|...+..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~ 267 (335)
T 2owb_A 249 TYLRIKKNEYSIPKHINPV 267 (335)
T ss_dssp HHHHHHHTCCCCCTTSCHH
T ss_pred HHHHHhcCCCCCCccCCHH
Confidence 9999999988888765543
No 62
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=6.3e-36 Score=330.29 Aligned_cols=232 Identities=25% Similarity=0.408 Sum_probs=190.8
Q ss_pred cccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (931)
...+..++|++.+.||+|+||.||++.+ ++..||+|++..... .......+.+|+.+|+.++||||+++++++....
T Consensus 31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 107 (309)
T 3p86_A 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDF-HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP 107 (309)
T ss_dssp -CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCC-SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred cccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC
Confidence 3456778999999999999999999987 688999999876532 4555678899999999999999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 743 HVCLITDYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~g--IiHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
.+|+||||+.+++|.+++..... ..+++..++.++.||+.||.|||++| |+||||||+|||++.++.+||+|||++.
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 187 (309)
T 3p86_A 108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187 (309)
T ss_dssp CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence 99999999999999999976421 23899999999999999999999999 9999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~ 899 (931)
..... ........||+.|+|||++.+..++.++|||||||++|+|++|+.||.
T Consensus 188 ~~~~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~ 240 (309)
T 3p86_A 188 LKAST---------------------------FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG 240 (309)
T ss_dssp -----------------------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTT
T ss_pred ccccc---------------------------ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 43210 112234579999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHc--CCCCCCCCCcCC
Q 002356 900 GKTRQKTFANILH--KDLKFPSSTPRS 924 (931)
Q Consensus 900 ~~~~~~~~~~I~~--~~~~~p~~~~~~ 924 (931)
+.+..+....+.. ..+.+|...+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (309)
T 3p86_A 241 NLNPAQVVAAVGFKCKRLEIPRNLNPQ 267 (309)
T ss_dssp TSCHHHHHHHHHHSCCCCCCCTTSCHH
T ss_pred CCCHHHHHHHHHhcCCCCCCCccCCHH
Confidence 9999888888754 345666655443
No 63
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=4.7e-36 Score=342.21 Aligned_cols=229 Identities=19% Similarity=0.307 Sum_probs=192.7
Q ss_pred ccCCCcccccccccc--CcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 002356 666 INLQHFRPIKPLGSG--DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G--~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (931)
...++|++++.||+| +||.||++.+..+++.||+|++..... .......+.+|+.+|+.++||||+++++++...+.
T Consensus 22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 100 (389)
T 3gni_B 22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE 100 (389)
T ss_dssp CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCE
Confidence 356789999999999 999999999999999999999987533 34566778899999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+|+|||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||.+.....
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 101 LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999999999876556699999999999999999999999999999999999999999999999998854321
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC--CCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
.... ...........+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.
T Consensus 181 ~~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 240 (389)
T 3gni_B 181 HGQR--------------------QRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 240 (389)
T ss_dssp TTEE--------------------CSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred cccc--------------------ccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 1000 0000112234579999999999987 57899999999999999999999999988
Q ss_pred CHHHHHHHHHcCCC
Q 002356 902 TRQKTFANILHKDL 915 (931)
Q Consensus 902 ~~~~~~~~I~~~~~ 915 (931)
+..+.+..++.+.+
T Consensus 241 ~~~~~~~~~~~~~~ 254 (389)
T 3gni_B 241 PATQMLLEKLNGTV 254 (389)
T ss_dssp CSTTHHHHC-----
T ss_pred CHHHHHHHHhcCCC
Confidence 77777766665543
No 64
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.4e-36 Score=335.88 Aligned_cols=222 Identities=27% Similarity=0.436 Sum_probs=183.5
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++++.||+|+||.||++.+..+++.||+|++..... ......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 83 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc--cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 5789999999999999999999999999999999865422 22335678899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
||||.|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 84 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~-- 159 (323)
T 3tki_A 84 LEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-- 159 (323)
T ss_dssp EECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETT--
T ss_pred EEcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCC--
Confidence 9999999999998764 349999999999999999999999999999999999999999999999999996432110
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCCHH-H
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQ-K 905 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~ell~G~~Pf~~~~~~-~ 905 (931)
.........||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.+.. .
T Consensus 160 -----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~ 216 (323)
T 3tki_A 160 -----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 216 (323)
T ss_dssp -----------------------EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH
T ss_pred -----------------------cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH
Confidence 0112235679999999999987765 67899999999999999999999875543 3
Q ss_pred HHHHHHcCCCCCC
Q 002356 906 TFANILHKDLKFP 918 (931)
Q Consensus 906 ~~~~I~~~~~~~p 918 (931)
.+..+.......+
T Consensus 217 ~~~~~~~~~~~~~ 229 (323)
T 3tki_A 217 EYSDWKEKKTYLN 229 (323)
T ss_dssp HHHHHHTTCTTST
T ss_pred HHHHHhcccccCC
Confidence 3334444433333
No 65
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.7e-35 Score=320.28 Aligned_cols=222 Identities=29% Similarity=0.498 Sum_probs=197.5
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++.+.||+|+||.||++.+..+++.||+|++..... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 5789999999999999999999999999999999976533 445567788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc---EEEEeccCCcccCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSCLTSCK 824 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~---vkL~DFG~a~~~~~~ 824 (931)
|||+.+++|.+.+... ..+++..++.++.||+.||.|||++||+||||||+||+++.++. +||+|||++......
T Consensus 84 ~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp ECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred EecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 9999999999988765 34999999999999999999999999999999999999986655 999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus 162 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~ 213 (284)
T 3kk8_A 162 ----------------------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 213 (284)
T ss_dssp ----------------------------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ----------------------------ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh
Confidence 1123457999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCC
Q 002356 905 KTFANILHKDLKFPSS 920 (931)
Q Consensus 905 ~~~~~I~~~~~~~p~~ 920 (931)
++...+..+.+.+|..
T Consensus 214 ~~~~~~~~~~~~~~~~ 229 (284)
T 3kk8_A 214 RLYAQIKAGAYDYPSP 229 (284)
T ss_dssp HHHHHHHHTCCCCCTT
T ss_pred HHHHHHHhccccCCch
Confidence 9999999988877654
No 66
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=6.3e-36 Score=342.37 Aligned_cols=216 Identities=25% Similarity=0.437 Sum_probs=178.3
Q ss_pred CCCcccc-ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHH-HhcCCCCccceeEEEEe----C
Q 002356 668 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL-DMLDHPFVPALYASFQT----K 741 (931)
Q Consensus 668 ~~~y~i~-~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il-~~l~hpnIv~l~~~~~~----~ 741 (931)
.++|.+. +.||.|+||.||++.+..+++.||||++... ..+.+|+.++ +.++||||++++++|.. .
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~ 131 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 131 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCC
Confidence 4678887 6899999999999999999999999998643 3466788887 45589999999999876 6
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec---CCcEEEEeccCC
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLS 818 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~---~g~vkL~DFG~a 818 (931)
.++|+|||||.||+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 132 ~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 132 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred cEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccc
Confidence 78999999999999999998765556999999999999999999999999999999999999997 788999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
...... ......+||+.|+|||++.+..++.++|||||||+||+|++|..||
T Consensus 212 ~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf 263 (400)
T 1nxk_A 212 KETTSH----------------------------NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263 (400)
T ss_dssp EECC---------------------------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSC
T ss_pred cccCCC----------------------------CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCC
Confidence 643210 1123567999999999999999999999999999999999999999
Q ss_pred CCCCHH----HHHHHHHcCCCCCCC
Q 002356 899 RGKTRQ----KTFANILHKDLKFPS 919 (931)
Q Consensus 899 ~~~~~~----~~~~~I~~~~~~~p~ 919 (931)
.+.+.. .+...|..+.+.+|.
T Consensus 264 ~~~~~~~~~~~~~~~i~~~~~~~~~ 288 (400)
T 1nxk_A 264 YSNHGLAISPGMKTRIRMGQYEFPN 288 (400)
T ss_dssp CCCTTCSSCCSHHHHHHHTCCCCCT
T ss_pred CCCccccccHHHHHHHHcCcccCCC
Confidence 876543 356777888877764
No 67
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=6e-36 Score=333.42 Aligned_cols=224 Identities=24% Similarity=0.332 Sum_probs=188.8
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCe
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (931)
.+..++|++.+.||+|+||.||++.+..+++.||||++..... ...+.+|+.+++.+ +||||+++++++.....
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 79 (330)
T 2izr_A 5 LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKY 79 (330)
T ss_dssp CEETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTE
T ss_pred EEEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCc
Confidence 3556899999999999999999999999999999999875422 23577899999999 99999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc-----EEEEeccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-----VSLTDFDLS 818 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~-----vkL~DFG~a 818 (931)
.|+||||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||++
T Consensus 80 ~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a 157 (330)
T 2izr_A 80 NAMVLELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157 (330)
T ss_dssp EEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred cEEEEEeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence 99999999 99999999865 345999999999999999999999999999999999999998887 999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
......... ...+........||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus 158 ~~~~~~~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf 217 (330)
T 2izr_A 158 KEYIDPETK--------------------KHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 217 (330)
T ss_dssp EESBCTTTC--------------------CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred eeeecCCCC--------------------ccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCc
Confidence 754321110 011122345678999999999999999999999999999999999999999
Q ss_pred CC---CCHHHHHHHHHcCCC
Q 002356 899 RG---KTRQKTFANILHKDL 915 (931)
Q Consensus 899 ~~---~~~~~~~~~I~~~~~ 915 (931)
.+ ....+.+..|.....
T Consensus 218 ~~~~~~~~~~~~~~i~~~~~ 237 (330)
T 2izr_A 218 QGLKADTLKERYQKIGDTKR 237 (330)
T ss_dssp TTCCCSSHHHHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHhhhc
Confidence 87 445566666655433
No 68
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=336.98 Aligned_cols=219 Identities=26% Similarity=0.446 Sum_probs=186.4
Q ss_pred CCccc--cccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 669 QHFRP--IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 669 ~~y~i--~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
+.|.+ .+.||+|+||.||++.+..+++.||+|++.... ......+.+|+.+|+.++||||+++++++...+.+|+
T Consensus 87 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 163 (373)
T 2x4f_A 87 SFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG---MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVL 163 (373)
T ss_dssp GTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc---cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence 34555 568999999999999999999999999997642 3455678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEE--ecCCcEEEEeccCCcccCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL--QGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll--~~~g~vkL~DFG~a~~~~~~ 824 (931)
|||||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 164 v~E~~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~ 242 (373)
T 2x4f_A 164 VMEYVDGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR 242 (373)
T ss_dssp EEECCTTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT
T ss_pred EEeCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc
Confidence 999999999999987542 348999999999999999999999999999999999999 45678999999998654211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus 243 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~ 294 (373)
T 2x4f_A 243 ----------------------------EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA 294 (373)
T ss_dssp ----------------------------CBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred ----------------------------cccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 1122446999999999999888999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCC
Q 002356 905 KTFANILHKDLKFPS 919 (931)
Q Consensus 905 ~~~~~I~~~~~~~p~ 919 (931)
+.+.+|+.....+|.
T Consensus 295 ~~~~~i~~~~~~~~~ 309 (373)
T 2x4f_A 295 ETLNNILACRWDLED 309 (373)
T ss_dssp HHHHHHHHTCCCSCS
T ss_pred HHHHHHHhccCCCCh
Confidence 999999988776664
No 69
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.4e-35 Score=324.41 Aligned_cols=214 Identities=22% Similarity=0.400 Sum_probs=183.9
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++++.||+|+||.||++.+..+++.||+|++..... .......+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC-cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 689999999999999999999999999999999986542 3445577889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+.+ +|.+.+.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~~-~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 154 (292)
T 3o0g_A 81 EFCDQ-DLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP---- 154 (292)
T ss_dssp ECCSE-EHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC----
T ss_pred ecCCC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc----
Confidence 99954 6666665532 45999999999999999999999999999999999999999999999999999654211
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC-CCChhhHHHHHHHHHHHHcCCCC-CCCCCHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTP-FRGKTRQKT 906 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~ell~G~~P-f~~~~~~~~ 906 (931)
........||+.|+|||++.+.. ++.++|||||||++|+|++|..| |.+.+..+.
T Consensus 155 -----------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~ 211 (292)
T 3o0g_A 155 -----------------------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211 (292)
T ss_dssp -----------------------CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHH
T ss_pred -----------------------cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHH
Confidence 11223457899999999998765 79999999999999999987666 677888888
Q ss_pred HHHHHc
Q 002356 907 FANILH 912 (931)
Q Consensus 907 ~~~I~~ 912 (931)
+..+.+
T Consensus 212 ~~~i~~ 217 (292)
T 3o0g_A 212 LKRIFR 217 (292)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888765
No 70
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=4.8e-36 Score=352.27 Aligned_cols=222 Identities=30% Similarity=0.488 Sum_probs=197.4
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
...++|++.+.||+|+||.||+|.+..+++.||||++.+...........+.+|+.+|+.++||||+++++++...+.+|
T Consensus 23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 102 (484)
T 3nyv_A 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY 102 (484)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 34568999999999999999999999999999999998765544556678899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEE---ecCCcEEEEeccCCcccC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll---~~~g~vkL~DFG~a~~~~ 822 (931)
+|||||.|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 103 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 103 LVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp EEECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 999999999999999765 349999999999999999999999999999999999999 467899999999985442
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
.. ......+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+
T Consensus 181 ~~----------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~ 231 (484)
T 3nyv_A 181 AS----------------------------KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN 231 (484)
T ss_dssp CC----------------------------CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cc----------------------------cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC
Confidence 11 11224569999999999976 58999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCC
Q 002356 903 RQKTFANILHKDLKFP 918 (931)
Q Consensus 903 ~~~~~~~I~~~~~~~p 918 (931)
..+++.+|.++.+.++
T Consensus 232 ~~~~~~~i~~~~~~~~ 247 (484)
T 3nyv_A 232 EYDILKKVEKGKYTFE 247 (484)
T ss_dssp HHHHHHHHHHCCCCCC
T ss_pred HHHHHHHHHcCCCCCC
Confidence 9999999999987665
No 71
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-35 Score=339.03 Aligned_cols=234 Identities=26% Similarity=0.418 Sum_probs=179.4
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEEEEeCC--eE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKT--HV 744 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~--~~ 744 (931)
.++|++++.||+|+||.||+|.+..+++.||+|.+.+. .........+.+|+.+|+.+. ||||+++++++...+ .+
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccc-ccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 57899999999999999999999999999999998654 334556677889999999996 999999999997544 78
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+|||||+ ++|..++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 87 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 162 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNI 162 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSC
T ss_pred EEEecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccccccc
Confidence 99999995 6999999763 4899999999999999999999999999999999999999999999999999765321
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
......... . ..................+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+.
T Consensus 163 ~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 236 (388)
T 3oz6_A 163 RRVTNNIPL-----S-INENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236 (388)
T ss_dssp CCCCCCGGG-----C-CC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccc-----c-ccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 111000000 0 00000000111223345789999999999986 6789999999999999999999999999999
Q ss_pred HHHHHHHHc
Q 002356 904 QKTFANILH 912 (931)
Q Consensus 904 ~~~~~~I~~ 912 (931)
.+.+..|+.
T Consensus 237 ~~~~~~i~~ 245 (388)
T 3oz6_A 237 MNQLERIIG 245 (388)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988873
No 72
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=6.6e-36 Score=334.89 Aligned_cols=217 Identities=29% Similarity=0.450 Sum_probs=188.3
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~l 746 (931)
.++|++.+.||+|+||.||+|.+..+++.||+|++.+... ...+|++++..+ +||||+++++++.+...+|+
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 4689999999999999999999999999999999976532 234688888887 79999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC----CcEEEEeccCCcccC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDFDLSCLTS 822 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~----g~vkL~DFG~a~~~~ 822 (931)
|||||.||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+..+ +.+||+|||++....
T Consensus 94 v~E~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp EECCCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred EEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 99999999999999765 459999999999999999999999999999999999998543 359999999986432
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC--
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG-- 900 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~-- 900 (931)
.. .....+.+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+
T Consensus 172 ~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 224 (342)
T 2qr7_A 172 AE---------------------------NGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP 224 (342)
T ss_dssp CT---------------------------TCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSST
T ss_pred CC---------------------------CCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCC
Confidence 11 1122356799999999999888888999999999999999999999985
Q ss_pred -CCHHHHHHHHHcCCCCCCCC
Q 002356 901 -KTRQKTFANILHKDLKFPSS 920 (931)
Q Consensus 901 -~~~~~~~~~I~~~~~~~p~~ 920 (931)
.+..+++..|..+.+.++..
T Consensus 225 ~~~~~~~~~~i~~~~~~~~~~ 245 (342)
T 2qr7_A 225 DDTPEEILARIGSGKFSLSGG 245 (342)
T ss_dssp TSCHHHHHHHHHHCCCCCCST
T ss_pred cCCHHHHHHHHccCCcccCcc
Confidence 56788999999999887753
No 73
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=327.54 Aligned_cols=218 Identities=27% Similarity=0.421 Sum_probs=183.5
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeeccccc--ChHHHHHHHHHHHHHHhc---CCCCccceeEEEEe
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDML---DHPFVPALYASFQT 740 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~--~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~~ 740 (931)
+..++|++++.||+|+||.||++.+..+++.||+|++...... .......+.+|+.+++.+ +||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 3467999999999999999999999999999999998754221 111123455677776666 59999999999987
Q ss_pred CC-----eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEec
Q 002356 741 KT-----HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (931)
Q Consensus 741 ~~-----~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DF 815 (931)
.. .+++||||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Df 164 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADF 164 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSC
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeC
Confidence 54 5899999995 69999998766566999999999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCC
Q 002356 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 895 (931)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~ 895 (931)
|++...... .......||+.|+|||++.+..++.++|||||||++|+|++|+
T Consensus 165 g~a~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~ 216 (308)
T 3g33_A 165 GLARIYSYQ----------------------------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216 (308)
T ss_dssp SCTTTSTTC----------------------------CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSS
T ss_pred ccccccCCC----------------------------cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCC
Confidence 998643211 1123457999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHc
Q 002356 896 TPFRGKTRQKTFANILH 912 (931)
Q Consensus 896 ~Pf~~~~~~~~~~~I~~ 912 (931)
+||.+.+..+.+.+|.+
T Consensus 217 ~pf~~~~~~~~~~~i~~ 233 (308)
T 3g33_A 217 PLFCGNSEADQLGKIFD 233 (308)
T ss_dssp CSCCCSSHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHH
Confidence 99999999998888875
No 74
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.4e-35 Score=320.17 Aligned_cols=225 Identities=23% Similarity=0.366 Sum_probs=193.8
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (931)
+.+..++|++.+.||+|+||.||++.+. +++.||+|++..... ....+.+|+.+++.++||||+++++++.....
T Consensus 5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 79 (269)
T 4hcu_A 5 WVIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP 79 (269)
T ss_dssp CBCCGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred EEeChhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc----CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCc
Confidence 4567789999999999999999999985 577899999976532 23568899999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
.|+||||+++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 158 (269)
T 4hcu_A 80 ICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 158 (269)
T ss_dssp EEEEEECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred eEEEEEeCCCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccc
Confidence 999999999999999997643 4589999999999999999999999999999999999999999999999999864321
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~ 902 (931)
. .........||+.|+|||++.+..++.++|||||||++|+|++ |.+||.+.+
T Consensus 159 ~--------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~ 212 (269)
T 4hcu_A 159 D--------------------------QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 212 (269)
T ss_dssp H--------------------------HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred c--------------------------ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC
Confidence 0 0111233457889999999998899999999999999999999 999999999
Q ss_pred HHHHHHHHHcCC-CCCCCC
Q 002356 903 RQKTFANILHKD-LKFPSS 920 (931)
Q Consensus 903 ~~~~~~~I~~~~-~~~p~~ 920 (931)
..++...+..+. ...|..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~ 231 (269)
T 4hcu_A 213 NSEVVEDISTGFRLYKPRL 231 (269)
T ss_dssp HHHHHHHHHTTCCCCCCTT
T ss_pred HHHHHHHHhcCccCCCCCc
Confidence 999999998773 344443
No 75
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4e-35 Score=329.39 Aligned_cols=214 Identities=27% Similarity=0.420 Sum_probs=188.4
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
+.|.+++.||+|+||.||++.+..+++.||+|++.............+.+|+.+|+.++||||+++++++...+..|+||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 46999999999999999999999999999999998654444556678899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+. |+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 134 e~~~-g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~------ 205 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA------ 205 (348)
T ss_dssp ECCS-EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS------
T ss_pred ecCC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecC------
Confidence 9995 68888886432 459999999999999999999999999999999999999999999999999985432
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
......||+.|+|||++. ...++.++|||||||++|+|++|++||.+.+..+
T Consensus 206 -------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 260 (348)
T 1u5q_A 206 -------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 260 (348)
T ss_dssp -------------------------SBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred -------------------------CCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 112457999999999985 5678889999999999999999999999988888
Q ss_pred HHHHHHcCCC
Q 002356 906 TFANILHKDL 915 (931)
Q Consensus 906 ~~~~I~~~~~ 915 (931)
.+..+..+..
T Consensus 261 ~~~~~~~~~~ 270 (348)
T 1u5q_A 261 ALYHIAQNES 270 (348)
T ss_dssp HHHHHHHSCC
T ss_pred HHHHHHhcCC
Confidence 8877777654
No 76
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.7e-35 Score=328.49 Aligned_cols=222 Identities=30% Similarity=0.449 Sum_probs=195.7
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccCh---HHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.++|++.+.||+|+||.||++.+..+++.||+|++.+...... .....+.+|+.+++.++||||+++++++.....+
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 4679999999999999999999999999999999976533221 1356788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC----cEEEEeccCCcc
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCL 820 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g----~vkL~DFG~a~~ 820 (931)
|+||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++..
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~ 168 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence 9999999999999999764 4589999999999999999999999999999999999999887 799999999864
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 169 ~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 220 (321)
T 2a2a_A 169 IEDG----------------------------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220 (321)
T ss_dssp CCTT----------------------------CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred cCcc----------------------------ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCC
Confidence 3211 112345699999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCC
Q 002356 901 KTRQKTFANILHKDLKFPS 919 (931)
Q Consensus 901 ~~~~~~~~~I~~~~~~~p~ 919 (931)
.+..+.+..+..+...+|.
T Consensus 221 ~~~~~~~~~i~~~~~~~~~ 239 (321)
T 2a2a_A 221 DTKQETLANITSVSYDFDE 239 (321)
T ss_dssp SSHHHHHHHHHTTCCCCCH
T ss_pred CCHHHHHHHHHhcccccCh
Confidence 9999999998888776664
No 77
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.3e-35 Score=346.16 Aligned_cols=212 Identities=25% Similarity=0.447 Sum_probs=182.1
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC-----
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK----- 741 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~----- 741 (931)
..++|++++.||+|+||.||++.+..+++.||||++.+. .........+.+|+.+|+.++||||+++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 138 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESG-GGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcc-ccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence 357899999999999999999999999999999999765 33455677888999999999999999999999654
Q ss_pred -CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 742 -THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 742 -~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
..+|+||||++ ++|.+.+.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 139 ~~~~~lv~E~~~-~~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 139 FQDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp CCEEEEEEECCS-EEHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred CCeEEEEEeCCC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 46799999995 457777643 289999999999999999999999999999999999999999999999999964
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
... .......+||+.|+|||++.+..|+.++|||||||+||+|++|++||.+
T Consensus 214 ~~~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g 265 (464)
T 3ttj_A 214 AGT----------------------------SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 265 (464)
T ss_dssp -------------------------------CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCC----------------------------CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 321 0122346899999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHc
Q 002356 901 KTRQKTFANILH 912 (931)
Q Consensus 901 ~~~~~~~~~I~~ 912 (931)
.+..+.+.+|.+
T Consensus 266 ~~~~~~~~~i~~ 277 (464)
T 3ttj_A 266 RDYIDQWNKVIE 277 (464)
T ss_dssp SSHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 999888888865
No 78
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.8e-35 Score=320.62 Aligned_cols=218 Identities=30% Similarity=0.529 Sum_probs=193.9
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++.+.||+|+||.||++.+..++..+|+|.+.+... .....+.+|+.+++.++||||+++++++......|+|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc---chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 3579999999999999999999999999999999876533 2356788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEE---ecCCcEEEEeccCCcccCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll---~~~g~vkL~DFG~a~~~~~~ 824 (931)
|||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 85 MELCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp EECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred EeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 9999999999998765 349999999999999999999999999999999999999 77889999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
.......||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..
T Consensus 163 ----------------------------~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 213 (277)
T 3f3z_A 163 ----------------------------KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS 213 (277)
T ss_dssp ----------------------------SCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ----------------------------cchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH
Confidence 112345699999999998765 889999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCC
Q 002356 905 KTFANILHKDLKFPS 919 (931)
Q Consensus 905 ~~~~~I~~~~~~~p~ 919 (931)
+++.++.++.+.+|.
T Consensus 214 ~~~~~~~~~~~~~~~ 228 (277)
T 3f3z_A 214 EVMLKIREGTFTFPE 228 (277)
T ss_dssp HHHHHHHHCCCCCCH
T ss_pred HHHHHHHhCCCCCCc
Confidence 999999999888775
No 79
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=332.24 Aligned_cols=218 Identities=31% Similarity=0.487 Sum_probs=177.4
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
..++|.+.+.||+|+||.||+|.+..+++.||+|++.... ....+.+|+.+|+.++||||+++++++......|+
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 125 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL 125 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence 4568999999999999999999999999999999987642 33567789999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec---CCcEEEEeccCCcccCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~---~g~vkL~DFG~a~~~~~ 823 (931)
||||+.|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++.....
T Consensus 126 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 126 VLELVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp EECCCCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred EEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 99999999999999764 44999999999999999999999999999999999999975 88999999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
. .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+...
T Consensus 204 ~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 255 (349)
T 2w4o_A 204 Q----------------------------VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG 255 (349)
T ss_dssp -------------------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC
T ss_pred c----------------------------cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc
Confidence 0 112345799999999999999999999999999999999999999987655
Q ss_pred H-HHHHHHHcCCCCCCC
Q 002356 904 Q-KTFANILHKDLKFPS 919 (931)
Q Consensus 904 ~-~~~~~I~~~~~~~p~ 919 (931)
. .++..+.++...++.
T Consensus 256 ~~~~~~~i~~~~~~~~~ 272 (349)
T 2w4o_A 256 DQFMFRRILNCEYYFIS 272 (349)
T ss_dssp HHHHHHHHHTTCCCCCT
T ss_pred cHHHHHHHHhCCCccCC
Confidence 4 477888887766554
No 80
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-35 Score=331.78 Aligned_cols=233 Identities=21% Similarity=0.324 Sum_probs=198.5
Q ss_pred cccCCCccccccccccCcEEEEEEEEec-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~-----~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (931)
.+..++|++.+.||+|+||.||++.+.. +++.||+|++.... .......+.+|+.+++.++||||+++++++.
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 4567899999999999999999999973 45899999997642 3445678899999999999999999999999
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q 002356 740 TKTHVCLITDYCPGGELFLLLDRQP----------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 797 (931)
Q Consensus 740 ~~~~~~lVmE~~~ggsL~~~l~~~~----------------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDI 797 (931)
..+..|+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dl 200 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDL 200 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 9999999999999999999998642 145899999999999999999999999999999
Q ss_pred CCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCC
Q 002356 798 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS 877 (931)
Q Consensus 798 KP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~ 877 (931)
||+|||++.++.+||+|||++....... .........||+.|+|||++.+..++.
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~-------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~ 255 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSAD-------------------------YYKADGNDAIPIRWMPPESIFYNRYTT 255 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGG-------------------------CBC----CCBCGGGCCHHHHHHCCCCH
T ss_pred CcceEEECCCCeEEEeecCCCcccccCc-------------------------cccccCCCcccceecChhhhccCCcCc
Confidence 9999999999999999999985432110 011223456899999999999888999
Q ss_pred hhhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCcCC
Q 002356 878 AVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDL-KFPSSTPRS 924 (931)
Q Consensus 878 ~~DiwSlGvil~ell~-G~~Pf~~~~~~~~~~~I~~~~~-~~p~~~~~~ 924 (931)
++|||||||++|+|++ |..||.+.+..++...+.++.. .+|...+..
T Consensus 256 ~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (343)
T 1luf_A 256 ESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLE 304 (343)
T ss_dssp HHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHH
T ss_pred ccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCCCCCCHH
Confidence 9999999999999998 9999999999999999988765 566655543
No 81
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.3e-35 Score=321.40 Aligned_cols=230 Identities=29% Similarity=0.478 Sum_probs=194.1
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+..++|.+.+.||+|+||.||++.+..+++.||+|++.............+.+|+.+++.++||||+++++++...+..
T Consensus 7 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 86 (276)
T 2h6d_A 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDF 86 (276)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred cceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeE
Confidence 45678999999999999999999999989999999999765433334456788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++......
T Consensus 87 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 87 FMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 9999999999999999865 34899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
.......||+.|+|||++.+..+ +.++||||||+++|+|++|+.||...+.
T Consensus 165 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~ 216 (276)
T 2h6d_A 165 ----------------------------EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 216 (276)
T ss_dssp ----------------------------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ----------------------------cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH
Confidence 11123468999999999987765 5799999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCcCC
Q 002356 904 QKTFANILHKDLKFPSSTPRS 924 (931)
Q Consensus 904 ~~~~~~I~~~~~~~p~~~~~~ 924 (931)
.++++.+..+...+|...+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~ 237 (276)
T 2h6d_A 217 PTLFKKIRGGVFYIPEYLNRS 237 (276)
T ss_dssp HHHHHHHHHCCCCCCTTSCHH
T ss_pred HHHHHHhhcCcccCchhcCHH
Confidence 999999999888888765543
No 82
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.6e-36 Score=338.30 Aligned_cols=232 Identities=20% Similarity=0.286 Sum_probs=194.5
Q ss_pred cccCCCccccccccccCcEEEEEEE-----EecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVE-----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~-----~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (931)
.+..++|++.+.||+|+||.||++. +..+++.||||.+... ........+.+|+.+++.++||||+++++++.
T Consensus 67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~ 144 (367)
T 3l9p_A 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNIVRCIGVSL 144 (367)
T ss_dssp BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc--cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence 4566799999999999999999999 4457889999998653 23445567889999999999999999999999
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC---cEE
Q 002356 740 TKTHVCLITDYCPGGELFLLLDRQP-----TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVS 811 (931)
Q Consensus 740 ~~~~~~lVmE~~~ggsL~~~l~~~~-----~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g---~vk 811 (931)
.....|+|||||.||+|.+++.... ...++...++.++.||+.||.|||++||+||||||+|||++.+| .+|
T Consensus 145 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 145 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred cCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEE
Confidence 9999999999999999999998642 13589999999999999999999999999999999999999555 599
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHH
Q 002356 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (931)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el 891 (931)
|+|||+++..... ..........||+.|+|||++.+..++.++|||||||++|+|
T Consensus 225 L~DFG~a~~~~~~-------------------------~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el 279 (367)
T 3l9p_A 225 IGDFGMARDIYRA-------------------------GYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279 (367)
T ss_dssp ECCCHHHHHHHHH-------------------------SSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ECCCccccccccc-------------------------cccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHH
Confidence 9999998543100 011223456789999999999999999999999999999999
Q ss_pred Hc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCcC
Q 002356 892 LY-GYTPFRGKTRQKTFANILHKD-LKFPSSTPR 923 (931)
Q Consensus 892 l~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~~~ 923 (931)
++ |..||.+.+..+++..+..+. +..|...+.
T Consensus 280 lt~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 313 (367)
T 3l9p_A 280 FSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPG 313 (367)
T ss_dssp HTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCH
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCH
Confidence 98 999999999999999998865 455555443
No 83
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.4e-35 Score=329.98 Aligned_cols=216 Identities=29% Similarity=0.492 Sum_probs=169.4
Q ss_pred CCcccc---ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEEEEeCCeE
Q 002356 669 QHFRPI---KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHV 744 (931)
Q Consensus 669 ~~y~i~---~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~ 744 (931)
++|++. +.||+|+||.||+|.+..+++.||+|++.+. ....+.+|+.+++.+. ||||+++++++.+....
T Consensus 8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~ 81 (325)
T 3kn6_A 8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHT 81 (325)
T ss_dssp HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEE
Confidence 346654 7899999999999999999999999998653 3456778999999996 99999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC---cEEEEeccCCccc
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCLT 821 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g---~vkL~DFG~a~~~ 821 (931)
|+|||||+|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++...
T Consensus 82 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 159 (325)
T 3kn6_A 82 FLVMELLNGGELFERIKKK--KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK 159 (325)
T ss_dssp EEEECCCCSCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEEC
T ss_pred EEEEEccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceec
Confidence 9999999999999999875 4599999999999999999999999999999999999998766 8999999998643
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
... .......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.
T Consensus 160 ~~~---------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 212 (325)
T 3kn6_A 160 PPD---------------------------NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSH 212 (325)
T ss_dssp CC-------------------------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred CCC---------------------------CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 211 11123456899999999999999999999999999999999999999864
Q ss_pred -------CHHHHHHHHHcCCCCCCC
Q 002356 902 -------TRQKTFANILHKDLKFPS 919 (931)
Q Consensus 902 -------~~~~~~~~I~~~~~~~p~ 919 (931)
...+++.+|.++.+.++.
T Consensus 213 ~~~~~~~~~~~~~~~i~~~~~~~~~ 237 (325)
T 3kn6_A 213 DRSLTCTSAVEIMKKIKKGDFSFEG 237 (325)
T ss_dssp -----CCCHHHHHHHHTTTCCCCCS
T ss_pred ccccccccHHHHHHHHHcCCCCCCc
Confidence 346788888888877664
No 84
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.1e-35 Score=329.63 Aligned_cols=215 Identities=25% Similarity=0.429 Sum_probs=172.7
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++++.||+|+||.||++.+..+++.||+|.+.... .......+.+|+.+|+.++||||+++++++...+.+|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS--TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc--ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence 468999999999999999999999999999999997643 222345678899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 748 TDYCPGGELFLLLDRQP----TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
|||+. ++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 160 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGI 160 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTS
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCC
Confidence 99996 69999987531 23589999999999999999999999999999999999999999999999999865421
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
. ........||+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+
T Consensus 161 ~---------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 213 (317)
T 2pmi_A 161 P---------------------------VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN 213 (317)
T ss_dssp C---------------------------CCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred C---------------------------cccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 1 1112345789999999999764 68999999999999999999999999999
Q ss_pred HHHHHHHHHc
Q 002356 903 RQKTFANILH 912 (931)
Q Consensus 903 ~~~~~~~I~~ 912 (931)
..+.+..|.+
T Consensus 214 ~~~~~~~i~~ 223 (317)
T 2pmi_A 214 DEEQLKLIFD 223 (317)
T ss_dssp HHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 9888888865
No 85
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.9e-35 Score=347.26 Aligned_cols=221 Identities=29% Similarity=0.481 Sum_probs=191.0
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccCh----------HHHHHHHHHHHHHHhcCCCCccceeE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR----------NKVHRACAEREILDMLDHPFVPALYA 736 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~----------~~~~~~~~E~~il~~l~hpnIv~l~~ 736 (931)
..++|.+++.||+|+||.||+|.+..+++.||+|++.+...... .....+.+|+.+|+.++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 35789999999999999999999999999999999987543211 23567889999999999999999999
Q ss_pred EEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC---cEEEE
Q 002356 737 SFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLT 813 (931)
Q Consensus 737 ~~~~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g---~vkL~ 813 (931)
++.....+|+|||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEEC
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEE
Confidence 999999999999999999999999765 3499999999999999999999999999999999999998776 69999
Q ss_pred eccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc
Q 002356 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 893 (931)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~ 893 (931)
|||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++
T Consensus 192 Dfg~a~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~ 242 (504)
T 3q5i_A 192 DFGLSSFFSKD----------------------------YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLC 242 (504)
T ss_dssp CCTTCEECCTT----------------------------SCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHH
T ss_pred ECCCCEEcCCC----------------------------CccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHh
Confidence 99999654211 11234579999999999874 58999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHcCCCCCC
Q 002356 894 GYTPFRGKTRQKTFANILHKDLKFP 918 (931)
Q Consensus 894 G~~Pf~~~~~~~~~~~I~~~~~~~p 918 (931)
|.+||.+.+..+++..|.++.+.+|
T Consensus 243 g~~pf~~~~~~~~~~~i~~~~~~~~ 267 (504)
T 3q5i_A 243 GYPPFGGQNDQDIIKKVEKGKYYFD 267 (504)
T ss_dssp SSCSSCCSSHHHHHHHHHHCCCCCC
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 9999999999999999999988766
No 86
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.3e-36 Score=325.65 Aligned_cols=227 Identities=30% Similarity=0.516 Sum_probs=172.3
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++.+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+..|+|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 45899999999999999999999999999999999765333333457788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 90 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~--- 165 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP--- 165 (278)
T ss_dssp EECCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred EecCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCC---
Confidence 9999999999999864 245899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+.+
T Consensus 166 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~ 221 (278)
T 3cok_A 166 ------------------------HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL 221 (278)
T ss_dssp --------------------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---
T ss_pred ------------------------CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH
Confidence 01122456899999999999888999999999999999999999999987776677
Q ss_pred HHHHcCCCCCCCCCc
Q 002356 908 ANILHKDLKFPSSTP 922 (931)
Q Consensus 908 ~~I~~~~~~~p~~~~ 922 (931)
..+....+.+|...+
T Consensus 222 ~~~~~~~~~~~~~~~ 236 (278)
T 3cok_A 222 NKVVLADYEMPSFLS 236 (278)
T ss_dssp --CCSSCCCCCTTSC
T ss_pred HHHhhcccCCccccC
Confidence 666666666665543
No 87
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.1e-35 Score=324.09 Aligned_cols=230 Identities=23% Similarity=0.335 Sum_probs=199.9
Q ss_pred cccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (931)
.+.+..++|++.+.||+|+||.||++.+..++..||+|.+... ......+.+|+.+++.++||||+++++++....
T Consensus 7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 82 (288)
T 3kfa_A 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82 (288)
T ss_dssp TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC----STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 3456788999999999999999999999999999999998754 235577889999999999999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
.+|+||||+.|++|.+++.......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 83 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 83 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp SEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred CEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 99999999999999999988666679999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~ 901 (931)
... ........||+.|+|||++.+..++.++|||||||++|+|++ |.+||.+.
T Consensus 163 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~ 216 (288)
T 3kfa_A 163 GDT--------------------------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216 (288)
T ss_dssp SSS--------------------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCc--------------------------cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 111 111233457889999999998899999999999999999999 99999998
Q ss_pred CHHHHHHHHHcC-CCCCCCCCc
Q 002356 902 TRQKTFANILHK-DLKFPSSTP 922 (931)
Q Consensus 902 ~~~~~~~~I~~~-~~~~p~~~~ 922 (931)
+..++...+..+ ....|...+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T 3kfa_A 217 DLSQVYELLEKDYRMERPEGCP 238 (288)
T ss_dssp CGGGHHHHHHTTCCCCCCTTCC
T ss_pred CHHHHHHHHhccCCCCCCCCCC
Confidence 888888777765 345555444
No 88
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.3e-35 Score=332.73 Aligned_cols=233 Identities=23% Similarity=0.347 Sum_probs=198.7
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecC-------CeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCcccee
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGS-------GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALY 735 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~-------~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~ 735 (931)
+.+..++|.+.+.||+|+||.||+|.+..+ +..||+|++... ........+.+|+.+++.+ +||||++++
T Consensus 64 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hpnIv~~~ 141 (382)
T 3tt0_A 64 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLL 141 (382)
T ss_dssp TBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc--cCHHHHHHHHHHHHHHHHhcCCchhhhhe
Confidence 346678999999999999999999998643 368999999764 2345567889999999999 999999999
Q ss_pred EEEEeCCeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCc
Q 002356 736 ASFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (931)
Q Consensus 736 ~~~~~~~~~~lVmE~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~N 801 (931)
+++...+.+|+||||+.+++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus 142 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N 221 (382)
T 3tt0_A 142 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN 221 (382)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred eeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcce
Confidence 99999999999999999999999998753 2359999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhH
Q 002356 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (931)
Q Consensus 802 Ill~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~Di 881 (931)
||++.++.+||+|||++........ ........||+.|+|||++.+..++.++||
T Consensus 222 Ill~~~~~~kL~DFG~a~~~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di 276 (382)
T 3tt0_A 222 VLVTEDNVMKIADFGLARDIHHIDY-------------------------YKKTTNGRLPVKWMAPEALFDRIYTHQSDV 276 (382)
T ss_dssp EEECTTCCEEECSCSCCCCSSCCCT-------------------------TCCCTTCCCGGGGSCHHHHHSCCCCHHHHH
T ss_pred EEEcCCCcEEEcccCcccccccccc-------------------------cccccCCCCCcceeCHHHhcCCCCCchhHH
Confidence 9999999999999999965431110 112234467899999999999999999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCcC
Q 002356 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKD-LKFPSSTPR 923 (931)
Q Consensus 882 wSlGvil~ell~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~~~ 923 (931)
|||||++|+|++ |..||.+.+..++++.+..+. ...|...+.
T Consensus 277 wslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (382)
T 3tt0_A 277 WSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTN 320 (382)
T ss_dssp HHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCH
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCH
Confidence 999999999999 999999999999998888764 455555443
No 89
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.6e-35 Score=327.30 Aligned_cols=217 Identities=24% Similarity=0.427 Sum_probs=182.7
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
+...++|++++.||+|+||.||++.+. +++.||+|.+..... .......+.+|+.+|+.++||||+++++++.....+
T Consensus 17 q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 94 (311)
T 3niz_A 17 QGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAE-DEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94 (311)
T ss_dssp ECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCE
T ss_pred cchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccc-cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEE
Confidence 345689999999999999999999984 589999999876422 333456788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+||||+. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 95 ~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 95 TLVFEFME-KDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp EEEEECCS-EEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred EEEEcCCC-CCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 99999995 58888887643 45999999999999999999999999999999999999999999999999999654211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
........||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+.
T Consensus 173 ---------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 225 (311)
T 3niz_A 173 ---------------------------VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD 225 (311)
T ss_dssp ---------------------------CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSST
T ss_pred ---------------------------cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCCh
Confidence 111234578999999999976 5688999999999999999999999998877
Q ss_pred HHHHHHHHc
Q 002356 904 QKTFANILH 912 (931)
Q Consensus 904 ~~~~~~I~~ 912 (931)
.+.+..+..
T Consensus 226 ~~~~~~i~~ 234 (311)
T 3niz_A 226 DDQLPKIFS 234 (311)
T ss_dssp TTHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777654
No 90
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.7e-35 Score=347.83 Aligned_cols=219 Identities=28% Similarity=0.473 Sum_probs=191.7
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++++.||+|+||.||+|.+..+++.||+|++.+.... ......+.+|+.+|+.++||||+++++++.....+|+|
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc-chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 46899999999999999999999999999999999764322 22356788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEe---cCCcEEEEeccCCcccCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ---GNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~---~~g~vkL~DFG~a~~~~~~ 824 (931)
||||.|++|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 100 ~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 100 GELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp ECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred EEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 9999999999998765 3499999999999999999999999999999999999995 4567999999998654211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
......+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..
T Consensus 178 ----------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~ 228 (486)
T 3mwu_A 178 ----------------------------TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY 228 (486)
T ss_dssp --------------------------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ----------------------------CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 11234579999999999976 4899999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCC
Q 002356 905 KTFANILHKDLKFP 918 (931)
Q Consensus 905 ~~~~~I~~~~~~~p 918 (931)
+++..|..+.+.++
T Consensus 229 ~~~~~i~~~~~~~~ 242 (486)
T 3mwu_A 229 DILKRVETGKYAFD 242 (486)
T ss_dssp HHHHHHHHTCCCSC
T ss_pred HHHHHHHhCCCCCC
Confidence 99999999887654
No 91
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.8e-35 Score=323.71 Aligned_cols=218 Identities=22% Similarity=0.313 Sum_probs=182.8
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
+..++|.+.+.||+|+||.||++.+..+++.||+|.+... .......+.+|+.+++.++||||+++++++......+
T Consensus 7 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 83 (310)
T 3s95_A 7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLN 83 (310)
T ss_dssp ECGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred eChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeE
Confidence 5567999999999999999999999999999999988543 4566778899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
+||||+.+++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 84 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 84 FITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp EEEECCTTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred EEEEecCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 9999999999999998743 459999999999999999999999999999999999999999999999999997653221
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
...... ...............||+.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus 163 ~~~~~~-------------~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~ 224 (310)
T 3s95_A 163 TQPEGL-------------RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPD 224 (310)
T ss_dssp ------------------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTT
T ss_pred cccccc-------------ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcc
Confidence 110000 00000011222356899999999999999999999999999999999999999865
No 92
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.7e-35 Score=323.16 Aligned_cols=213 Identities=24% Similarity=0.411 Sum_probs=180.9
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++++.||+|+||.||++.+ .+++.||+|.+..... .......+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKE-DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEecccc-ccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence 5899999999999999999998 6789999999875432 2223466789999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 153 (288)
T 1ob3_A 80 EHLD-QDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP---- 153 (288)
T ss_dssp ECCS-EEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred EecC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcc----
Confidence 9995 59999987643 45899999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
........||+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+.+
T Consensus 154 -----------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 210 (288)
T 1ob3_A 154 -----------------------VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQL 210 (288)
T ss_dssp -------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred -----------------------ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 0112244689999999999764 5889999999999999999999999999888888
Q ss_pred HHHHc
Q 002356 908 ANILH 912 (931)
Q Consensus 908 ~~I~~ 912 (931)
..+.+
T Consensus 211 ~~~~~ 215 (288)
T 1ob3_A 211 MRIFR 215 (288)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77764
No 93
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.1e-35 Score=324.54 Aligned_cols=219 Identities=25% Similarity=0.306 Sum_probs=180.5
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
...++|++.+.||+|+||.||++.+..+++.||+|++.............+.+|+.+++.++||||+++++++...+..|
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 34679999999999999999999999999999999998765555566788899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
+||||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 111 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EEEECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 999999999999999875 349999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+...
T Consensus 189 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 242 (309)
T 2h34_A 189 --------------------------LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV 242 (309)
T ss_dssp ----------------------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH
T ss_pred --------------------------cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH
Confidence 111234569999999999999889999999999999999999999999877664
Q ss_pred HHHHHHc
Q 002356 906 TFANILH 912 (931)
Q Consensus 906 ~~~~I~~ 912 (931)
+...+..
T Consensus 243 ~~~~~~~ 249 (309)
T 2h34_A 243 MGAHINQ 249 (309)
T ss_dssp HHHHHHS
T ss_pred HHHHhcc
Confidence 4444433
No 94
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.3e-35 Score=347.27 Aligned_cols=220 Identities=30% Similarity=0.510 Sum_probs=188.3
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++++.||+|+||.||+|.+..++..||+|++.+.... ......+.+|+.+|+.++||||+++++++.....+|+|
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS-TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC-chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 34799999999999999999999999999999999865332 22346788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC---CcEEEEeccCCcccCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~---g~vkL~DFG~a~~~~~~ 824 (931)
||||.||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.. +.+||+|||++......
T Consensus 115 ~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 115 MECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred EecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 9999999999998765 349999999999999999999999999999999999999764 45999999998654211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
......+||+.|+|||++. ..++.++|||||||++|+|++|.+||.+.+..
T Consensus 193 ----------------------------~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~ 243 (494)
T 3lij_A 193 ----------------------------KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ 243 (494)
T ss_dssp ----------------------------BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ----------------------------ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 1123457999999999986 46899999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCC
Q 002356 905 KTFANILHKDLKFPS 919 (931)
Q Consensus 905 ~~~~~I~~~~~~~p~ 919 (931)
+++.+|..+.+.++.
T Consensus 244 ~~~~~i~~~~~~~~~ 258 (494)
T 3lij_A 244 EILRKVEKGKYTFDS 258 (494)
T ss_dssp HHHHHHHHTCCCCCS
T ss_pred HHHHHHHhCCCCCCc
Confidence 999999999887664
No 95
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-35 Score=327.01 Aligned_cols=220 Identities=27% Similarity=0.431 Sum_probs=185.7
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC--e
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--H 743 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~ 743 (931)
...++|++.+.||+|+||.||++.+..+++.||+|++..... ......+.+|+.+|+.++||||+++++++.... .
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 83 (319)
T 4euu_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRH 83 (319)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCC
T ss_pred CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCce
Confidence 346789999999999999999999999999999999976432 223566789999999999999999999998655 8
Q ss_pred EEEEEeccCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEE----ecCCcEEEEeccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLS 818 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll----~~~g~vkL~DFG~a 818 (931)
.|+||||+++++|.+++..... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 8999999999999999986422 339999999999999999999999999999999999999 67778999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc--------CCCCCChhhHHHHHHHHHH
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA--------GAGHTSAVDWWALGILLYE 890 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~--------~~~~~~~~DiwSlGvil~e 890 (931)
...... .......||+.|+|||++. +..++.++|||||||++|+
T Consensus 164 ~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~e 215 (319)
T 4euu_A 164 RELEDD----------------------------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH 215 (319)
T ss_dssp EECCTT----------------------------CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHH
T ss_pred eecCCC----------------------------CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHH
Confidence 654211 1123457999999999986 5678899999999999999
Q ss_pred HHcCCCCCCC----CCHHHHHHHHHcCCC
Q 002356 891 MLYGYTPFRG----KTRQKTFANILHKDL 915 (931)
Q Consensus 891 ll~G~~Pf~~----~~~~~~~~~I~~~~~ 915 (931)
|++|+.||.. ....+++.+++.+..
T Consensus 216 l~~g~~pf~~~~~~~~~~~~~~~~~~~~p 244 (319)
T 4euu_A 216 AATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (319)
T ss_dssp HHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred HHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence 9999999974 334567777776543
No 96
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=5.3e-35 Score=324.70 Aligned_cols=213 Identities=29% Similarity=0.461 Sum_probs=188.3
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
.|...+.||+|+||.||++.+..+++.||||++.... ......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 122 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLME 122 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT---CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc---hhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 4777889999999999999999899999999987642 2345668899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|++|++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 123 ~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~----- 194 (321)
T 2c30_A 123 FLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD----- 194 (321)
T ss_dssp CCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS-----
T ss_pred cCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccC-----
Confidence 9999999999875 34999999999999999999999999999999999999999999999999998654211
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~ 909 (931)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..
T Consensus 195 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~ 252 (321)
T 2c30_A 195 ----------------------VPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR 252 (321)
T ss_dssp ----------------------SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred ----------------------ccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 0112345799999999999999999999999999999999999999999998888888
Q ss_pred HHcCCC
Q 002356 910 ILHKDL 915 (931)
Q Consensus 910 I~~~~~ 915 (931)
+.....
T Consensus 253 ~~~~~~ 258 (321)
T 2c30_A 253 LRDSPP 258 (321)
T ss_dssp HHHSSC
T ss_pred HhcCCC
Confidence 876543
No 97
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.7e-35 Score=343.35 Aligned_cols=231 Identities=21% Similarity=0.264 Sum_probs=165.2
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe-----CC
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-----KT 742 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-----~~ 742 (931)
.++|++++.||+|+||.||+|.+..+++.||||++.+. ........++.+|+.+|+.++||||+++++++.. ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV-FEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECST-TSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechh-hcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 47899999999999999999999999999999998764 3345567788999999999999999999999843 36
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
.+|+||||+ +++|..++... ..+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+++...
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 131 ELYVVLEIA-DSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp CEEEEECCC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred eEEEEEecc-ccchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 799999998 78999999764 459999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhh-cCCCCCChhhHHHHHHHHHHHHc--------
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-AGAGHTSAVDWWALGILLYEMLY-------- 893 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~-~~~~~~~~~DiwSlGvil~ell~-------- 893 (931)
....................................+||+.|+|||++ ....++.++|||||||+||||++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~ 287 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAY 287 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSS
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccc
Confidence 322110000000000000000000000001233467899999999986 45678999999999999999998
Q ss_pred ---CCCCCCCCC
Q 002356 894 ---GYTPFRGKT 902 (931)
Q Consensus 894 ---G~~Pf~~~~ 902 (931)
|++||.+.+
T Consensus 288 ~~~~~p~f~g~~ 299 (458)
T 3rp9_A 288 HADRGPLFPGSS 299 (458)
T ss_dssp GGGCCCSCC---
T ss_pred cccccccCCCCc
Confidence 788887654
No 98
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=4.8e-35 Score=321.98 Aligned_cols=219 Identities=33% Similarity=0.530 Sum_probs=191.7
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|.+.+.||+|+||.||++.+..+++.||+|++.... ......+.+|+.+++.++||||+++++++......|+|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP---AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc---ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 458999999999999999999999999999999997642 22335678999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEE---ecCCcEEEEeccCCcccCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll---~~~g~vkL~DFG~a~~~~~~ 824 (931)
|||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.....
T Consensus 85 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~- 161 (304)
T 2jam_A 85 MQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN- 161 (304)
T ss_dssp ECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC-
T ss_pred EEcCCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC-
Confidence 9999999999998764 348999999999999999999999999999999999999 6788999999999853210
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus 162 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 213 (304)
T 2jam_A 162 ----------------------------GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES 213 (304)
T ss_dssp ----------------------------BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred ----------------------------CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH
Confidence 0112346999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCC
Q 002356 905 KTFANILHKDLKFPSS 920 (931)
Q Consensus 905 ~~~~~I~~~~~~~p~~ 920 (931)
+++..+.++.+.+|..
T Consensus 214 ~~~~~i~~~~~~~~~~ 229 (304)
T 2jam_A 214 KLFEKIKEGYYEFESP 229 (304)
T ss_dssp HHHHHHHHCCCCCCTT
T ss_pred HHHHHHHcCCCCCCcc
Confidence 9999999988766543
No 99
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=7.9e-36 Score=338.94 Aligned_cols=236 Identities=21% Similarity=0.312 Sum_probs=199.8
Q ss_pred cccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (931)
.+.+..++|.+.+.||+|+||.||++.+..+++.||+|.+... ........+.+|+.+|+.++||||+++++++...+
T Consensus 108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 185 (377)
T 3cbl_A 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET--LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ 185 (377)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT--SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred ccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc--CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC
Confidence 3457778999999999999999999999989999999998754 23445567889999999999999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
.+|+||||+++|+|.+++.... ..++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 186 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 186 PIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp SCEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred CcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 9999999999999999997642 348999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~ 901 (931)
.... ........+++.|+|||++....++.++|||||||++|||++ |..||.+.
T Consensus 265 ~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~ 319 (377)
T 3cbl_A 265 DGVY-------------------------AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL 319 (377)
T ss_dssp TSEE-------------------------ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS
T ss_pred CCce-------------------------eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 1000 001122346778999999998889999999999999999998 99999999
Q ss_pred CHHHHHHHHHcC-CCCCCCCCcCChh
Q 002356 902 TRQKTFANILHK-DLKFPSSTPRSKE 926 (931)
Q Consensus 902 ~~~~~~~~I~~~-~~~~p~~~~~~~~ 926 (931)
+..++...+.++ .+.+|..+|....
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~l~ 345 (377)
T 3cbl_A 320 SNQQTREFVEKGGRLPCPELCPDAVF 345 (377)
T ss_dssp CHHHHHHHHHTTCCCCCCTTCCHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCHHHH
Confidence 998888888775 4567776654443
No 100
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.1e-35 Score=325.81 Aligned_cols=234 Identities=21% Similarity=0.313 Sum_probs=198.3
Q ss_pred ccccccCCCccccccccccCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeE
Q 002356 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYA 736 (931)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~-----~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~ 736 (931)
....+..++|.+.+.||+|+||.||++.+. .++..||+|++.... .......+.+|+.+|+.++||||+++++
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~ 93 (314)
T 2ivs_A 16 PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLYG 93 (314)
T ss_dssp TTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred cccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCceeeEEE
Confidence 345677889999999999999999999984 455899999987542 3456678899999999999999999999
Q ss_pred EEEeCCeEEEEEeccCCCCHHHHHhhCCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002356 737 SFQTKTHVCLITDYCPGGELFLLLDRQPT----------------------KVLKEDAVRFYAAEVVVALEYLHCQGIIY 794 (931)
Q Consensus 737 ~~~~~~~~~lVmE~~~ggsL~~~l~~~~~----------------------~~l~~~~~~~i~~qil~aL~~LH~~gIiH 794 (931)
++...+..|+||||+.+++|.+++..... ..+++..++.++.||+.||.|||++||+|
T Consensus 94 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH 173 (314)
T 2ivs_A 94 ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVH 173 (314)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 99999999999999999999999986432 34899999999999999999999999999
Q ss_pred CCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC
Q 002356 795 RDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG 874 (931)
Q Consensus 795 rDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~ 874 (931)
|||||+|||++.++.+||+|||++........ ........||+.|+|||++.+..
T Consensus 174 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~ 228 (314)
T 2ivs_A 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDS-------------------------YVKRSQGRIPVKWMAIESLFDHI 228 (314)
T ss_dssp CCCSGGGEEEETTTEEEECCCTTCEECTTTSC-------------------------EECSSCCCSCGGGCCHHHHHHCE
T ss_pred cccchheEEEcCCCCEEEcccccccccccccc-------------------------ceeccCCCCcccccChhhhcCCC
Confidence 99999999999999999999999865431110 11122345788999999999888
Q ss_pred CCChhhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCc
Q 002356 875 HTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKD-LKFPSSTP 922 (931)
Q Consensus 875 ~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~~ 922 (931)
++.++|||||||++|+|++ |..||.+.+..+++..+..+. ..+|...+
T Consensus 229 ~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (314)
T 2ivs_A 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCS 278 (314)
T ss_dssp ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCC
T ss_pred cCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCCccCC
Confidence 9999999999999999999 999999998888888887764 45555444
No 101
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=335.01 Aligned_cols=205 Identities=19% Similarity=0.246 Sum_probs=174.8
Q ss_pred ccccCCCccccccccccCcEEEEEE-----EEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC---CCCcccee
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLV-----ELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALY 735 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~-----~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~l~ 735 (931)
..+..++|.+.+.||+|+||.||+| .+..+++.||+|++... ....+..|+.+++.+. |+||+.++
T Consensus 60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~l~~~~~~~iv~~~ 133 (365)
T 3e7e_A 60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA------NPWEFYIGTQLMERLKPSMQHMFMKFY 133 (365)
T ss_dssp EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC------CHHHHHHHHHHHHHSCGGGGGGBCCEE
T ss_pred EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC------ChhHHHHHHHHHHHhhhhhhhhhhhhh
Confidence 3466788999999999999999999 46778999999998754 2345777888888886 89999999
Q ss_pred EEEEeCCeEEEEEeccCCCCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec------
Q 002356 736 ASFQTKTHVCLITDYCPGGELFLLLDRQ---PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG------ 806 (931)
Q Consensus 736 ~~~~~~~~~~lVmE~~~ggsL~~~l~~~---~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~------ 806 (931)
+++...+..|+|||||+||+|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 134 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~ 213 (365)
T 3e7e_A 134 SAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQD 213 (365)
T ss_dssp EEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC-
T ss_pred eeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcc
Confidence 9999999999999999999999999742 2356999999999999999999999999999999999999998
Q ss_pred -----CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhH
Q 002356 807 -----NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (931)
Q Consensus 807 -----~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~Di 881 (931)
++.+||+|||+|+...... ........+||+.|+|||++.+..++.++||
T Consensus 214 ~~~~~~~~~kl~DFG~a~~~~~~~-------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di 268 (365)
T 3e7e_A 214 DEDDLSAGLALIDLGQSIDMKLFP-------------------------KGTIFTAKCETSGFQCVEMLSNKPWNYQIDY 268 (365)
T ss_dssp -----CTTEEECCCTTCEEGGGSC-------------------------TTEEECCSSCTTSCCCHHHHTTCCBSTHHHH
T ss_pred ccccccCCEEEeeCchhhhhhccC-------------------------CCceeeeecCCCCCCChHHhcCCCCCccccH
Confidence 8999999999995432110 1112345679999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCC
Q 002356 882 WALGILLYEMLYGYTPFR 899 (931)
Q Consensus 882 wSlGvil~ell~G~~Pf~ 899 (931)
|||||++|+|++|+.||.
T Consensus 269 wslG~il~elltg~~pf~ 286 (365)
T 3e7e_A 269 FGVAATVYCMLFGTYMKV 286 (365)
T ss_dssp HHHHHHHHHHHHSSCCCE
T ss_pred HHHHHHHHHHHhCCCccc
Confidence 999999999999999985
No 102
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.7e-35 Score=322.21 Aligned_cols=215 Identities=27% Similarity=0.391 Sum_probs=182.8
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++++.||+|+||.||+|.+..+++.||+|.+.... ........+.+|+.+++.++||||+++++++...+..++|
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV 80 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence 368999999999999999999999999999999986642 2344567788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 81 ~e~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 155 (311)
T 4agu_A 81 FEYCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP--- 155 (311)
T ss_dssp EECCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EEeCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc---
Confidence 9999999999988764 34999999999999999999999999999999999999999999999999998654211
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
........||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.
T Consensus 156 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 211 (311)
T 4agu_A 156 ------------------------SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ 211 (311)
T ss_dssp ----------------------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred ------------------------ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 111234578999999999976 5678999999999999999999999999988887
Q ss_pred HHHHHc
Q 002356 907 FANILH 912 (931)
Q Consensus 907 ~~~I~~ 912 (931)
+..+.+
T Consensus 212 ~~~~~~ 217 (311)
T 4agu_A 212 LYLIRK 217 (311)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776654
No 103
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.5e-35 Score=333.76 Aligned_cols=233 Identities=24% Similarity=0.366 Sum_probs=189.9
Q ss_pred cccccCCCccccccccccCcEEEEEEEE-----ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeE
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 736 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~-----~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~ 736 (931)
.+.+..++|++.+.||+|+||.||++.+ ..+++.||+|++.... .......+.+|+.+++.+ +||||+++++
T Consensus 16 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~ 93 (359)
T 3vhe_A 16 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLG 93 (359)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeeeee
Confidence 3457788999999999999999999994 4567899999997642 344567789999999999 7999999999
Q ss_pred EEEeCC-eEEEEEeccCCCCHHHHHhhCCC--------------------------------------------------
Q 002356 737 SFQTKT-HVCLITDYCPGGELFLLLDRQPT-------------------------------------------------- 765 (931)
Q Consensus 737 ~~~~~~-~~~lVmE~~~ggsL~~~l~~~~~-------------------------------------------------- 765 (931)
++...+ .+++|||||.||+|.+++.....
T Consensus 94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (359)
T 3vhe_A 94 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSL 173 (359)
T ss_dssp EECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------
T ss_pred eeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccccc
Confidence 988754 48999999999999999986432
Q ss_pred --------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCc
Q 002356 766 --------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 831 (931)
Q Consensus 766 --------------~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~ 831 (931)
..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~----- 248 (359)
T 3vhe_A 174 SDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD----- 248 (359)
T ss_dssp ----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT-----
T ss_pred chhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc-----
Confidence 1289999999999999999999999999999999999999999999999999965421110
Q ss_pred chhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHHHHH-HH
Q 002356 832 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTF-AN 909 (931)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~~-~~ 909 (931)
........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+....+.+ ..
T Consensus 249 --------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~ 308 (359)
T 3vhe_A 249 --------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 308 (359)
T ss_dssp --------------------CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH
T ss_pred --------------------chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHH
Confidence 112234578999999999999999999999999999999998 99999987654444 44
Q ss_pred HHcC-CCCCCCCCc
Q 002356 910 ILHK-DLKFPSSTP 922 (931)
Q Consensus 910 I~~~-~~~~p~~~~ 922 (931)
+..+ ...+|...+
T Consensus 309 ~~~~~~~~~~~~~~ 322 (359)
T 3vhe_A 309 LKEGTRMRAPDYTT 322 (359)
T ss_dssp HHHTCCCCCCTTCC
T ss_pred HHcCCCCCCCCCCC
Confidence 4443 345555443
No 104
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.8e-35 Score=331.17 Aligned_cols=229 Identities=29% Similarity=0.473 Sum_probs=190.4
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeeccccc--ChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
.++|++.+.||+|+||.||++.+..+++.||+|++.+.... .......+.+|+.+|+.++||||+++++++...+..|
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 46899999999999999999999999999999999765321 2345678899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhC--------------------------------------CCCCCCHHHHHHHHHHHHHHHHHH
Q 002356 746 LITDYCPGGELFLLLDRQ--------------------------------------PTKVLKEDAVRFYAAEVVVALEYL 787 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~--------------------------------------~~~~l~~~~~~~i~~qil~aL~~L 787 (931)
+|||||+|++|.+++... ....+++..++.++.||+.||.||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 999999999999998521 011246788999999999999999
Q ss_pred HHCCCccCCCCCCcEEEecCC--cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCccc
Q 002356 788 HCQGIIYRDLKPENVLLQGNG--HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI 865 (931)
Q Consensus 788 H~~gIiHrDIKP~NIll~~~g--~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~ 865 (931)
|++||+||||||+|||++.++ .+||+|||++........ ..........||+.|+
T Consensus 185 H~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~-----------------------~~~~~~~~~~gt~~y~ 241 (345)
T 3hko_A 185 HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNN-----------------------GEYYGMTTKAGTPYFV 241 (345)
T ss_dssp HHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTC-----------------------C--------CCCGGGC
T ss_pred HHCCccccCCChhhEEEecCCCceEEEeeccccccccccCc-----------------------cccccccccCCCcccc
Confidence 999999999999999998776 899999999965421110 0011223557999999
Q ss_pred chhhhcC--CCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCC
Q 002356 866 APEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPS 919 (931)
Q Consensus 866 aPE~~~~--~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~~~~~p~ 919 (931)
|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+.++..+...++.
T Consensus 242 aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 297 (345)
T 3hko_A 242 APEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFEN 297 (345)
T ss_dssp CHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTS
T ss_pred CchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCC
Confidence 9999975 67889999999999999999999999999999999999988776654
No 105
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=6e-35 Score=317.54 Aligned_cols=227 Identities=24% Similarity=0.347 Sum_probs=191.4
Q ss_pred cccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (931)
.+.+..++|++++.||+|+||.||++.+. ++..||+|++..... ....+.+|+.+++.++||||+++++++....
T Consensus 18 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 92 (283)
T 3gen_A 18 SWEIDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR 92 (283)
T ss_dssp TTBCCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred CccCCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC----CHHHHHHHHHHHhcCCCCCEeeEEEEEecCC
Confidence 45577889999999999999999999875 678899999976532 2356889999999999999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
..|+||||+.+++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 171 (283)
T 3gen_A 93 PIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171 (283)
T ss_dssp SEEEEECCCTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred CeEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccccc
Confidence 9999999999999999997632 349999999999999999999999999999999999999999999999999986432
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~ 901 (931)
... ........||+.|+|||++.+..++.++|||||||++|+|++ |+.||...
T Consensus 172 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~ 225 (283)
T 3gen_A 172 DDE--------------------------YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 225 (283)
T ss_dssp CHH--------------------------HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred ccc--------------------------cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 100 011223457889999999998889999999999999999998 99999999
Q ss_pred CHHHHHHHHHcCCC-CCCCCC
Q 002356 902 TRQKTFANILHKDL-KFPSST 921 (931)
Q Consensus 902 ~~~~~~~~I~~~~~-~~p~~~ 921 (931)
+..+....+..+.. ..|...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~ 246 (283)
T 3gen_A 226 TNSETAEHIAQGLRLYRPHLA 246 (283)
T ss_dssp CHHHHHHHHHTTCCCCCCTTC
T ss_pred ChhHHHHHHhcccCCCCCCcC
Confidence 99999999887743 444433
No 106
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-35 Score=332.31 Aligned_cols=232 Identities=40% Similarity=0.729 Sum_probs=191.5
Q ss_pred cccCCCccccccccccCcEEEEEEEEe---cCCeEEEEEEeeccccc-ChHHHHHHHHHHHHHHhc-CCCCccceeEEEE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDML-DHPFVPALYASFQ 739 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~---~~~~~~AvK~~~~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~ 739 (931)
.+..++|++.+.||+|+||.||++++. .+++.||||++.+.... .......+.+|+.+|+.+ +||||+++++++.
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 129 (355)
T 1vzo_A 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ 129 (355)
T ss_dssp CCCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE
T ss_pred cccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEe
Confidence 345679999999999999999999985 48899999998764321 122334566799999999 7999999999999
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 740 ~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
..+.+|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 130 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 130 TETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp ETTEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred eCceEEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 999999999999999999999865 349999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC--CCCCChhhHHHHHHHHHHHHcCCCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~ell~G~~P 897 (931)
..... ........+||+.|+|||++.+ ..++.++|||||||+||+|++|+.|
T Consensus 208 ~~~~~--------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~p 261 (355)
T 1vzo_A 208 EFVAD--------------------------ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261 (355)
T ss_dssp ECCGG--------------------------GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCT
T ss_pred ecccC--------------------------CCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 43210 0112234679999999999985 3478899999999999999999999
Q ss_pred CCC----CCHHHHHHHHHcCCCCCCCCCcCC
Q 002356 898 FRG----KTRQKTFANILHKDLKFPSSTPRS 924 (931)
Q Consensus 898 f~~----~~~~~~~~~I~~~~~~~p~~~~~~ 924 (931)
|.. .....+...+......+|...+..
T Consensus 262 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (355)
T 1vzo_A 262 FTVDGEKNSQAEISRRILKSEPPYPQEMSAL 292 (355)
T ss_dssp TSCTTSCCCHHHHHHHHHHCCCCCCTTSCHH
T ss_pred CccCCccchHHHHHHHHhccCCCCCcccCHH
Confidence 974 345667777777777777765443
No 107
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4.5e-35 Score=340.62 Aligned_cols=231 Identities=23% Similarity=0.411 Sum_probs=198.4
Q ss_pred cccccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe
Q 002356 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (931)
Q Consensus 661 ~~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (931)
..++.+..++|++.+.||+|+||.||++.+ +++.||||+++... ....+.+|+.+|+.++||||+++++++..
T Consensus 185 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~--~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 257 (450)
T 1k9a_A 185 RSGWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVE 257 (450)
T ss_dssp HTTCBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred ccccccChHHeEEEeeecCcCCeeEEEEEe--cCCeEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEEEEEEEc
Confidence 456778899999999999999999999988 47899999987642 34678899999999999999999999876
Q ss_pred CC-eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 741 KT-HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 741 ~~-~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
.. .+|+|||||++|+|.+++.......++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus 258 ~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 337 (450)
T 1k9a_A 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 337 (450)
T ss_dssp TTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred CCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcc
Confidence 54 79999999999999999987655558999999999999999999999999999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPF 898 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf 898 (931)
.... ......+++.|+|||++.+..++.++|||||||+||+|++ |..||
T Consensus 338 ~~~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~ 387 (450)
T 1k9a_A 338 EASS------------------------------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387 (450)
T ss_dssp ECC------------------------------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred cccc------------------------------cccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 3211 0112357889999999999999999999999999999998 99999
Q ss_pred CCCCHHHHHHHHHcC-CCCCCCCCcCChhhh
Q 002356 899 RGKTRQKTFANILHK-DLKFPSSTPRSKEQI 928 (931)
Q Consensus 899 ~~~~~~~~~~~I~~~-~~~~p~~~~~~~~~~ 928 (931)
.+.+..+++..+.++ .+..|..++.....+
T Consensus 388 ~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~l 418 (450)
T 1k9a_A 388 PRIPLKDVVPRVEKGYKMDAPDGCPPAVYDV 418 (450)
T ss_dssp TTSCTTTHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred CCCCHHHHHHHHHcCCCCCCCCcCCHHHHHH
Confidence 998888899888877 457777666554443
No 108
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=9.2e-35 Score=315.91 Aligned_cols=221 Identities=31% Similarity=0.506 Sum_probs=192.1
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccCh---HHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.++|++.+.||+|+||.||++.+..+++.||+|++........ .....+.+|+.+++.++||||+++++++......
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 3579999999999999999999999999999999976533221 2356788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC----cEEEEeccCCcc
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCL 820 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g----~vkL~DFG~a~~ 820 (931)
|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+|||++..
T Consensus 84 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp EEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 9999999999999999764 3499999999999999999999999999999999999998777 899999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 162 ~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 213 (283)
T 3bhy_A 162 IEAG----------------------------NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 213 (283)
T ss_dssp CC------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ccCC----------------------------CcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCC
Confidence 3211 111234699999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCC
Q 002356 901 KTRQKTFANILHKDLKFP 918 (931)
Q Consensus 901 ~~~~~~~~~I~~~~~~~p 918 (931)
.+..+.+..+......++
T Consensus 214 ~~~~~~~~~~~~~~~~~~ 231 (283)
T 3bhy_A 214 ETKQETLTNISAVNYDFD 231 (283)
T ss_dssp SSHHHHHHHHHTTCCCCC
T ss_pred cchHHHHHHhHhcccCCc
Confidence 999999888888776665
No 109
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3.4e-35 Score=333.16 Aligned_cols=233 Identities=23% Similarity=0.330 Sum_probs=186.0
Q ss_pred cccccCCCccccccccccCcEEEEEEEEe---cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~---~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (931)
...+..++|++.+.||+|+||.||++.+. .++..||+|.++... .......+.+|+.+|+.++||||+++++++.
T Consensus 39 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 116 (373)
T 2qol_A 39 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFDHPNIIRLEGVVT 116 (373)
T ss_dssp SCBCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred HhhcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence 34567789999999999999999999986 467789999987642 3445678899999999999999999999999
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 740 ~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
....+|+||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 117 ~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 195 (373)
T 2qol_A 117 KSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGR 195 (373)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred eCCceEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCcccc
Confidence 9999999999999999999997643 459999999999999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPF 898 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf 898 (931)
........ ........+++.|+|||++.+..++.++|||||||++|+|++ |+.||
T Consensus 196 ~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~ 251 (373)
T 2qol_A 196 VLEDDPEA------------------------AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251 (373)
T ss_dssp ------------------------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTT
T ss_pred ccccCCcc------------------------ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCC
Confidence 54321100 001112346788999999999999999999999999999997 99999
Q ss_pred CCCCHHHHHHHHHcCC-CCCCCCCc
Q 002356 899 RGKTRQKTFANILHKD-LKFPSSTP 922 (931)
Q Consensus 899 ~~~~~~~~~~~I~~~~-~~~p~~~~ 922 (931)
.+.+..+++..+..+. +..|...+
T Consensus 252 ~~~~~~~~~~~i~~~~~~~~~~~~~ 276 (373)
T 2qol_A 252 WEMSNQDVIKAVDEGYRLPPPMDCP 276 (373)
T ss_dssp TTCCHHHHHHHHHTTEECCCCTTCB
T ss_pred CCCCHHHHHHHHHcCCCCCCCcccc
Confidence 9999999888887763 34444443
No 110
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-35 Score=332.38 Aligned_cols=210 Identities=29% Similarity=0.477 Sum_probs=180.2
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC------
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (931)
.++|++++.||+|+||.||++.+..+++.||+|.+.... ........+.+|+.+|+.++||||+++++++...
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 578999999999999999999999999999999986542 3445567788999999999999999999999765
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
..+|+||||+ +++|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred ceEEEEEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 3469999999 89999999863 4899999999999999999999999999999999999999999999999998643
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+
T Consensus 179 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 228 (367)
T 1cm8_A 179 DS------------------------------EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG 228 (367)
T ss_dssp CS------------------------------SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cc------------------------------ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence 21 1224578999999999987 6789999999999999999999999999
Q ss_pred CCHHHHHHHHHc
Q 002356 901 KTRQKTFANILH 912 (931)
Q Consensus 901 ~~~~~~~~~I~~ 912 (931)
.+..+.+..|.+
T Consensus 229 ~~~~~~l~~i~~ 240 (367)
T 1cm8_A 229 SDHLDQLKEIMK 240 (367)
T ss_dssp SSHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 999888888765
No 111
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=5.4e-35 Score=321.34 Aligned_cols=232 Identities=26% Similarity=0.373 Sum_probs=194.7
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeeccccc-ChHHHHHHHHHHHHHHhcCCCCccceeEEEE--eCCeE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-NRNKVHRACAEREILDMLDHPFVPALYASFQ--TKTHV 744 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~--~~~~~ 744 (931)
.++|.+.+.||+|+||.||++.+..+++.||+|++.+.... .......+.+|+.+++.++||||+++++++. .....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46899999999999999999999999999999999764321 1344577889999999999999999999984 45689
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+||||+.++ |.+++.......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 9999999665 888887765667999999999999999999999999999999999999999999999999998654211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCC--CChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH--TSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~--~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
.. ........||+.|+|||++.+... +.++|||||||++|+|++|..||.+.+
T Consensus 163 ~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 217 (305)
T 2wtk_C 163 AA-------------------------DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN 217 (305)
T ss_dssp CS-------------------------SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cc-------------------------ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch
Confidence 00 111234569999999999976543 679999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCcCCh
Q 002356 903 RQKTFANILHKDLKFPSSTPRSK 925 (931)
Q Consensus 903 ~~~~~~~I~~~~~~~p~~~~~~~ 925 (931)
..+++..+.++.+.+|...+...
T Consensus 218 ~~~~~~~i~~~~~~~~~~~~~~l 240 (305)
T 2wtk_C 218 IYKLFENIGKGSYAIPGDCGPPL 240 (305)
T ss_dssp HHHHHHHHHHCCCCCCSSSCHHH
T ss_pred HHHHHHHHhcCCCCCCCccCHHH
Confidence 99999999999888887665443
No 112
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=5.6e-35 Score=330.45 Aligned_cols=220 Identities=30% Similarity=0.509 Sum_probs=191.5
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeeccccc-----ChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCC
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NRNKVHRACAEREILDML-DHPFVPALYASFQTKT 742 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~-----~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 742 (931)
++|.+.+.||.|+||.||+|.+..+|+.||||++...... .......+.+|+.+++.+ +||||+++++++...+
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 5799999999999999999999889999999998764311 112245678899999999 8999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
..|+||||+.|++|.+++... ..+++..++.++.||+.||.|||++||+|+||||+|||++.+|.+||+|||++....
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~ 251 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLE 251 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence 999999999999999999864 349999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC------CCCCChhhHHHHHHHHHHHHcCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG------AGHTSAVDWWALGILLYEMLYGYT 896 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~ell~G~~ 896 (931)
.. .......||+.|+|||++.+ ..++.++|||||||++|+|++|..
T Consensus 252 ~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~ 303 (365)
T 2y7j_A 252 PG----------------------------EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSP 303 (365)
T ss_dssp TT----------------------------CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred CC----------------------------cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCC
Confidence 11 11234679999999999863 357889999999999999999999
Q ss_pred CCCCCCHHHHHHHHHcCCCCCC
Q 002356 897 PFRGKTRQKTFANILHKDLKFP 918 (931)
Q Consensus 897 Pf~~~~~~~~~~~I~~~~~~~p 918 (931)
||.+.+...++..+..+.+.++
T Consensus 304 pf~~~~~~~~~~~i~~~~~~~~ 325 (365)
T 2y7j_A 304 PFWHRRQILMLRMIMEGQYQFS 325 (365)
T ss_dssp SSCCSSHHHHHHHHHHTCCCCC
T ss_pred CCCCCCHHHHHHHHHhCCCCCC
Confidence 9999999999999988877655
No 113
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=6.9e-35 Score=322.33 Aligned_cols=227 Identities=27% Similarity=0.442 Sum_probs=185.0
Q ss_pred CCCcccc-ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEE
Q 002356 668 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 668 ~~~y~i~-~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 745 (931)
.+.|++. +.||+|+||.||++.+..+++.||+|++.+.. ......+.+|+.+|.++ +||||+++++++...+.+|
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~ 87 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY 87 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS---SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc---chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence 4689986 78999999999999999999999999997652 23456788999999885 7999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc---EEEEeccCCcccC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSCLTS 822 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~---vkL~DFG~a~~~~ 822 (931)
+||||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||++....
T Consensus 88 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 165 (316)
T 2ac3_A 88 LVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165 (316)
T ss_dssp EEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred EEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence 999999999999999875 34999999999999999999999999999999999999987775 9999999986542
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-----CCCCChhhHHHHHHHHHHHHcCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~ell~G~~P 897 (931)
...... ..........+||+.|+|||++.. ..++.++|||||||++|+|++|+.|
T Consensus 166 ~~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~p 225 (316)
T 2ac3_A 166 LNGDCS--------------------PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225 (316)
T ss_dssp ------------------------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCS
T ss_pred cCCccc--------------------cccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCC
Confidence 111000 000111234569999999999975 4578899999999999999999999
Q ss_pred CCCCC---------------HHHHHHHHHcCCCCCCC
Q 002356 898 FRGKT---------------RQKTFANILHKDLKFPS 919 (931)
Q Consensus 898 f~~~~---------------~~~~~~~I~~~~~~~p~ 919 (931)
|.+.+ ...++..+..+.+.+|.
T Consensus 226 f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 262 (316)
T 2ac3_A 226 FVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPD 262 (316)
T ss_dssp CCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCH
T ss_pred CcccccccccccccccchhHHHHHHHHHhccCcccCc
Confidence 98754 35677888888887774
No 114
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=5.8e-35 Score=317.61 Aligned_cols=230 Identities=26% Similarity=0.393 Sum_probs=185.3
Q ss_pred cccCCCccccccccccCcEEEEEEEEecC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~---~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
.+..++|++.+.||+|+||.||++.+..+ +..+|+|.+... ........+.+|+.+++.++||||+++++++. .
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~ 87 (281)
T 1mp8_A 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E 87 (281)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-S
T ss_pred EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-c
Confidence 46678999999999999999999998653 567999988653 23455677889999999999999999999884 5
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
+..|+||||+.+++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 88 NPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred CccEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECcccccccc
Confidence 67899999999999999998653 35899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~ 900 (931)
.... ........+++.|+|||++....++.++|||||||++|+|++ |.+||.+
T Consensus 167 ~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~ 220 (281)
T 1mp8_A 167 EDST--------------------------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 220 (281)
T ss_dssp --------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred Cccc--------------------------ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCc
Confidence 2110 011223457889999999998889999999999999999996 9999999
Q ss_pred CCHHHHHHHHHcCC-CCCCCCCcCC
Q 002356 901 KTRQKTFANILHKD-LKFPSSTPRS 924 (931)
Q Consensus 901 ~~~~~~~~~I~~~~-~~~p~~~~~~ 924 (931)
.+..+++..+.++. ..+|...+..
T Consensus 221 ~~~~~~~~~i~~~~~~~~~~~~~~~ 245 (281)
T 1mp8_A 221 VKNNDVIGRIENGERLPMPPNCPPT 245 (281)
T ss_dssp CCGGGHHHHHHTTCCCCCCTTCCHH
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCHH
Confidence 98888888888764 4566655443
No 115
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=6.6e-35 Score=318.04 Aligned_cols=226 Identities=18% Similarity=0.251 Sum_probs=188.1
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCC-------eEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSG-------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS 737 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~-------~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~ 737 (931)
.+..++|.+.+.||+|+||.||++.+..++ ..||+|.+... .......+.+|+.+++.++||||++++++
T Consensus 4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 80 (289)
T 4fvq_A 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA---HRNYSESFFEAASMMSKLSHKHLVLNYGV 80 (289)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG---GGGGHHHHHHHHHHHHTSCCTTBCCEEEE
T ss_pred EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc---cHHHHHHHHHHHHHHHhCCCCCEeEEEEE
Confidence 356779999999999999999999998776 57999998654 23455778899999999999999999999
Q ss_pred EEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc--------
Q 002356 738 FQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-------- 809 (931)
Q Consensus 738 ~~~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~-------- 809 (931)
+...+..|+||||+.|++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.
T Consensus 81 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 81 CVCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp ECCTTCCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred EEeCCCCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccce
Confidence 999999999999999999999998753 34899999999999999999999999999999999999998887
Q ss_pred EEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHH
Q 002356 810 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILL 888 (931)
Q Consensus 810 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil 888 (931)
+||+|||++.... ......||+.|+|||++.+ ..++.++|||||||++
T Consensus 160 ~kl~Dfg~~~~~~-------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il 208 (289)
T 4fvq_A 160 IKLSDPGISITVL-------------------------------PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTL 208 (289)
T ss_dssp EEECCCCSCTTTS-------------------------------CHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHH
T ss_pred eeeccCccccccc-------------------------------CccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHH
Confidence 9999999984331 1123458899999999987 6788999999999999
Q ss_pred HHHHcC-CCCCCCCCHHHHHHHHHcCCCCCCCCCcCChh
Q 002356 889 YEMLYG-YTPFRGKTRQKTFANILHKDLKFPSSTPRSKE 926 (931)
Q Consensus 889 ~ell~G-~~Pf~~~~~~~~~~~I~~~~~~~p~~~~~~~~ 926 (931)
|+|++| .+||...+.... ..+......+|...+....
T Consensus 209 ~el~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~ 246 (289)
T 4fvq_A 209 WEICSGGDKPLSALDSQRK-LQFYEDRHQLPAPKAAELA 246 (289)
T ss_dssp HHHHTTTCCTTTTSCHHHH-HHHHHTTCCCCCCSSCTTH
T ss_pred HHHHcCCCCCccccchHHH-HHHhhccCCCCCCCCHHHH
Confidence 999995 556655555444 4455556666665554433
No 116
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-35 Score=328.21 Aligned_cols=226 Identities=23% Similarity=0.349 Sum_probs=187.8
Q ss_pred cccccCCCccccccccccCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeE
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 736 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~-----~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~ 736 (931)
.+.+..++|.+.+.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+|+.+ +||||+++++
T Consensus 39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 116 (344)
T 1rjb_A 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLG 116 (344)
T ss_dssp GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence 45577789999999999999999999983 456789999997542 233456788999999999 8999999999
Q ss_pred EEEeCCeEEEEEeccCCCCHHHHHhhCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q 002356 737 SFQTKTHVCLITDYCPGGELFLLLDRQPT---------------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYR 795 (931)
Q Consensus 737 ~~~~~~~~~lVmE~~~ggsL~~~l~~~~~---------------------~~l~~~~~~~i~~qil~aL~~LH~~gIiHr 795 (931)
++...+..|+||||+++|+|.+++..... ..+++..++.++.||+.||.|||++||+||
T Consensus 117 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~ 196 (344)
T 1rjb_A 117 ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHR 196 (344)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred EEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 99999999999999999999999986532 237899999999999999999999999999
Q ss_pred CCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCC
Q 002356 796 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH 875 (931)
Q Consensus 796 DIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~ 875 (931)
||||+|||++.++.+||+|||++....... .........||+.|+|||++.+..+
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~-------------------------~~~~~~~~~~t~~y~aPE~~~~~~~ 251 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDS-------------------------NYVVRGNARLPVKWMAPESLFEGIY 251 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCT-------------------------TSEEETTEEECGGGCCHHHHHHCCC
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCc-------------------------cceeccCccCccCccCHHHhccCCC
Confidence 999999999999999999999986542111 0112234568899999999998899
Q ss_pred CChhhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCC
Q 002356 876 TSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDL 915 (931)
Q Consensus 876 ~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~~~~I~~~~~ 915 (931)
+.++|||||||++|+|++ |..||.+.+....+..++....
T Consensus 252 ~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~ 292 (344)
T 1rjb_A 252 TIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGF 292 (344)
T ss_dssp CHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTC
T ss_pred ChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCC
Confidence 999999999999999998 9999998776666666655543
No 117
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=5.3e-35 Score=325.46 Aligned_cols=225 Identities=28% Similarity=0.461 Sum_probs=193.7
Q ss_pred CCCcccc-ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEE
Q 002356 668 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 668 ~~~y~i~-~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 745 (931)
.++|.+. +.||+|+||.||++.+..+++.||+|++.+... .......+.+|+.+++.+ +||||+++++++......|
T Consensus 27 ~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~ 105 (327)
T 3lm5_A 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEII 105 (327)
T ss_dssp HHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET-TEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEE
Confidence 4568887 889999999999999999999999999986533 233456788999999999 5699999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec---CCcEEEEeccCCcccC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTS 822 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~---~g~vkL~DFG~a~~~~ 822 (931)
+||||+.+++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 106 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 185 (327)
T 3lm5_A 106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG 185 (327)
T ss_dssp EEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-
T ss_pred EEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccC
Confidence 9999999999999987655567999999999999999999999999999999999999987 7899999999996542
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
.. .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+
T Consensus 186 ~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 237 (327)
T 3lm5_A 186 HA----------------------------CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED 237 (327)
T ss_dssp ------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred Cc----------------------------cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 11 11224579999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCC
Q 002356 903 RQKTFANILHKDLKFPSST 921 (931)
Q Consensus 903 ~~~~~~~I~~~~~~~p~~~ 921 (931)
..+.+..+......+|...
T Consensus 238 ~~~~~~~i~~~~~~~~~~~ 256 (327)
T 3lm5_A 238 NQETYLNISQVNVDYSEET 256 (327)
T ss_dssp HHHHHHHHHHTCCCCCTTT
T ss_pred chHHHHHHHhcccccCchh
Confidence 9999999988777666543
No 118
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4.9e-35 Score=340.75 Aligned_cols=233 Identities=22% Similarity=0.338 Sum_probs=196.6
Q ss_pred ccccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
..+.+..++|++.+.||+|+||.||++.+. ++..||||.++... .....+.+|+.+|+.++||||+++++++. .
T Consensus 181 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~ 254 (454)
T 1qcf_A 181 DAWEIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLHAVVT-K 254 (454)
T ss_dssp TCSBCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS----BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-S
T ss_pred cceeechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC----ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-C
Confidence 345677889999999999999999999984 46789999997643 23567899999999999999999999886 6
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
...|+|||||.+|+|.+++.......++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 255 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~ 334 (454)
T 1qcf_A 255 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVI 334 (454)
T ss_dssp SSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGB
T ss_pred CccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEc
Confidence 67899999999999999997543335899999999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~ 900 (931)
.... ........+++.|+|||++....++.++|||||||+||||++ |+.||.+
T Consensus 335 ~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~ 388 (454)
T 1qcf_A 335 EDNE--------------------------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 388 (454)
T ss_dssp CCHH--------------------------HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCCc--------------------------eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCC
Confidence 2100 011123346889999999998889999999999999999999 9999999
Q ss_pred CCHHHHHHHHHcC-CCCCCCCCcCChh
Q 002356 901 KTRQKTFANILHK-DLKFPSSTPRSKE 926 (931)
Q Consensus 901 ~~~~~~~~~I~~~-~~~~p~~~~~~~~ 926 (931)
.+..+++..+.++ .+..|..++....
T Consensus 389 ~~~~~~~~~i~~~~~~~~~~~~~~~l~ 415 (454)
T 1qcf_A 389 MSNPEVIRALERGYRMPRPENCPEELY 415 (454)
T ss_dssp CCHHHHHHHHHHTCCCCCCTTSCHHHH
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCHHHH
Confidence 9999999998876 3456666554443
No 119
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1e-34 Score=313.45 Aligned_cols=219 Identities=28% Similarity=0.453 Sum_probs=179.5
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccC-hHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-RNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
+..++|++.+.||+|+||.||++.+ ++..+|+|++....... ......+.+|+.+++.++||||+++++++...+..
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (271)
T 3dtc_A 4 IDFAELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNL 81 (271)
T ss_dssp CCTTSEEEEEEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--C
T ss_pred cchhheeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCce
Confidence 4568999999999999999999998 58899999987643322 23356788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCCCcEEEec--------CCcEEEE
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG---IIYRDLKPENVLLQG--------NGHVSLT 813 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g---IiHrDIKP~NIll~~--------~g~vkL~ 813 (931)
|+||||+++++|.+++.. ..+++..++.++.||+.||.|||++| |+||||||+|||++. ++.+||+
T Consensus 82 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~ 158 (271)
T 3dtc_A 82 CLVMEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158 (271)
T ss_dssp EEEEECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred EEEEEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence 999999999999999864 35999999999999999999999999 999999999999985 6789999
Q ss_pred eccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc
Q 002356 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 893 (931)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~ 893 (931)
|||++...... ......||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 159 Dfg~~~~~~~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~ 209 (271)
T 3dtc_A 159 DFGLAREWHRT-----------------------------TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT 209 (271)
T ss_dssp CCCC------------------------------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHH
T ss_pred cCCcccccccc-----------------------------cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHh
Confidence 99998543210 1123469999999999999889999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHcCCCCCC
Q 002356 894 GYTPFRGKTRQKTFANILHKDLKFP 918 (931)
Q Consensus 894 G~~Pf~~~~~~~~~~~I~~~~~~~p 918 (931)
|+.||.+.+.......+..+....|
T Consensus 210 g~~p~~~~~~~~~~~~~~~~~~~~~ 234 (271)
T 3dtc_A 210 GEVPFRGIDGLAVAYGVAMNKLALP 234 (271)
T ss_dssp CCCTTTTSCHHHHHHHHHTSCCCCC
T ss_pred CCCCCCCCCHHHHHHhhhcCCCCCC
Confidence 9999999998888888877765443
No 120
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=3.6e-35 Score=327.10 Aligned_cols=217 Identities=23% Similarity=0.355 Sum_probs=178.6
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
....++|++++.||+|+||.||++.+..+++.||+|++..... .......+.+|+.+|+.++||||+++++++.....+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL 108 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc-ccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence 3456799999999999999999999999999999999976532 233445677899999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEe-----cCCcEEEEeccCCc
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-----GNGHVSLTDFDLSC 819 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~-----~~g~vkL~DFG~a~ 819 (931)
|+||||+. ++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.
T Consensus 109 ~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 109 HLIFEYAE-NDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EEEEECCS-EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EEEEecCC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 99999995 59999998764 499999999999999999999999999999999999995 44569999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
..... ........||+.|+|||++.+. .++.++|||||||++|+|++|++||
T Consensus 186 ~~~~~---------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf 238 (329)
T 3gbz_A 186 AFGIP---------------------------IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLF 238 (329)
T ss_dssp HHC--------------------------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred ccCCc---------------------------ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence 54211 1112345689999999999875 4799999999999999999999999
Q ss_pred CCCCHHHHHHHHHc
Q 002356 899 RGKTRQKTFANILH 912 (931)
Q Consensus 899 ~~~~~~~~~~~I~~ 912 (931)
.+.+..+.+.++.+
T Consensus 239 ~~~~~~~~~~~~~~ 252 (329)
T 3gbz_A 239 PGDSEIDQLFKIFE 252 (329)
T ss_dssp CCSSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 99999888888865
No 121
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.9e-35 Score=346.18 Aligned_cols=234 Identities=22% Similarity=0.320 Sum_probs=201.5
Q ss_pred cccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (931)
.+.+...+|++.+.||+|+||.||++.+..++..||||.+.... .....+.+|+.+|+.++||||+++++++....
T Consensus 214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 289 (495)
T 1opk_A 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 289 (495)
T ss_dssp CCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc----cchHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 45567789999999999999999999999889999999987643 23567889999999999999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
.+|+|||||.+|+|.+++.......++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 290 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 290 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp SCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred cEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 99999999999999999987655669999999999999999999999999999999999999999999999999996542
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~ 901 (931)
... ........+++.|+|||++....++.++|||||||+||+|++ |..||.+.
T Consensus 370 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~ 423 (495)
T 1opk_A 370 GDT--------------------------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 423 (495)
T ss_dssp TCC--------------------------EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCc--------------------------eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC
Confidence 110 111223457789999999998889999999999999999998 99999999
Q ss_pred CHHHHHHHHHcC-CCCCCCCCcCChh
Q 002356 902 TRQKTFANILHK-DLKFPSSTPRSKE 926 (931)
Q Consensus 902 ~~~~~~~~I~~~-~~~~p~~~~~~~~ 926 (931)
+..++++.+..+ .+..|..++....
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~l~ 449 (495)
T 1opk_A 424 DLSQVYELLEKDYRMERPEGCPEKVY 449 (495)
T ss_dssp CGGGHHHHHHTTCCCCCCTTCCHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCHHHH
Confidence 888888887765 3566666554443
No 122
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=4.5e-35 Score=324.96 Aligned_cols=233 Identities=23% Similarity=0.338 Sum_probs=179.4
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCe---EEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~---~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
.+..++|++.+.||+|+||.||+|.+..++. .||+|++..... .......+.+|+.+++.++||||+++++++...
T Consensus 19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII-ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS 97 (323)
T ss_dssp BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc-CHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence 3567799999999999999999999877765 899999876532 334567889999999999999999999999876
Q ss_pred CeE------EEEEeccCCCCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEE
Q 002356 742 THV------CLITDYCPGGELFLLLDRQP----TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (931)
Q Consensus 742 ~~~------~lVmE~~~ggsL~~~l~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vk 811 (931)
... ++||||+.+++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus 98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEE
T ss_pred ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEE
Confidence 655 99999999999999986431 12589999999999999999999999999999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHH
Q 002356 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (931)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el 891 (931)
|+|||++........ ........+++.|+|||++.+..++.++|||||||++|+|
T Consensus 178 l~Dfg~a~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 232 (323)
T 3qup_A 178 VADFGLSRKIYSGDY-------------------------YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEI 232 (323)
T ss_dssp ECCCCC------------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred Eeecccccccccccc-------------------------ccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHH
Confidence 999999965421110 1112234578899999999999999999999999999999
Q ss_pred Hc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCcC
Q 002356 892 LY-GYTPFRGKTRQKTFANILHKD-LKFPSSTPR 923 (931)
Q Consensus 892 l~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~~~ 923 (931)
++ |.+||.+.+..+++..+..+. ...|...+.
T Consensus 233 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (323)
T 3qup_A 233 MTRGQTPYAGIENAEIYNYLIGGNRLKQPPECME 266 (323)
T ss_dssp HTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCH
T ss_pred HhCCCCCccccChHHHHHHHhcCCCCCCCCccCH
Confidence 99 999999999988988888764 455555443
No 123
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=7.8e-35 Score=321.09 Aligned_cols=226 Identities=22% Similarity=0.334 Sum_probs=190.8
Q ss_pred cccccCCCccccccccccCcEEEEEEEE-----ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeE
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 736 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~-----~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~ 736 (931)
.+.+..++|.+.+.||+|+||.||++.+ ..+++.||+|.+.... .......+.+|+.+++.+ +||||+++++
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~ 94 (313)
T 1t46_A 17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLG 94 (313)
T ss_dssp GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch--hHHHHHHHHHHHHHHhhcccCCCeeeEEE
Confidence 3456778999999999999999999986 3467899999997642 334567788999999999 9999999999
Q ss_pred EEEeCCeEEEEEeccCCCCHHHHHhhCCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCC
Q 002356 737 SFQTKTHVCLITDYCPGGELFLLLDRQPT----------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPE 800 (931)
Q Consensus 737 ~~~~~~~~~lVmE~~~ggsL~~~l~~~~~----------------~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~ 800 (931)
++...+..++||||+++++|.+++..... ..+++..++.++.||+.||.|||++||+||||||+
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~ 174 (313)
T 1t46_A 95 ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR 174 (313)
T ss_dssp EECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred EEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccc
Confidence 99999999999999999999999986532 24899999999999999999999999999999999
Q ss_pred cEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhh
Q 002356 801 NVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 880 (931)
Q Consensus 801 NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~D 880 (931)
||+++.++.+||+|||++........ ........||+.|+|||++.+..++.++|
T Consensus 175 Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 229 (313)
T 1t46_A 175 NILLTHGRITKICDFGLARDIKNDSN-------------------------YVVKGNARLPVKWMAPESIFNCVYTFESD 229 (313)
T ss_dssp GEEEETTTEEEECCCGGGSCTTSCTT-------------------------SEECSSSEECGGGCCHHHHHHCCCCHHHH
T ss_pred eEEEcCCCCEEEcccccccccccccc-------------------------ceeccCCCCcceeeChHHhcCCCCChHHH
Confidence 99999999999999999865432110 11223456889999999999889999999
Q ss_pred HHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCC
Q 002356 881 WWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDL 915 (931)
Q Consensus 881 iwSlGvil~ell~-G~~Pf~~~~~~~~~~~I~~~~~ 915 (931)
||||||++|+|++ |..||.+......+..+.....
T Consensus 230 i~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~ 265 (313)
T 1t46_A 230 VWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 265 (313)
T ss_dssp HHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCC
Confidence 9999999999998 9999998766555555554433
No 124
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.2e-34 Score=316.03 Aligned_cols=222 Identities=30% Similarity=0.490 Sum_probs=188.0
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|.+.+.||+|+||.||++.+..++..+|+|.+.+... ......+.+|+.+|+.++||||+++++++......|+|
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 98 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS--QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV 98 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc--chhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence 3689999999999999999999999999999999976532 23456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEE---ecCCcEEEEeccCCcccC
Q 002356 748 TDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll---~~~g~vkL~DFG~a~~~~ 822 (931)
|||+++++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999999988642 23459999999999999999999999999999999999999 456789999999995432
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
.. .......||+.|+|||++. ..++.++|||||||++|+|++|+.||.+.+
T Consensus 179 ~~----------------------------~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~ 229 (285)
T 3is5_A 179 SD----------------------------EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS 229 (285)
T ss_dssp ------------------------------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred Cc----------------------------ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC
Confidence 11 1123456999999999986 468899999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCC
Q 002356 903 RQKTFANILHKDLKFPSS 920 (931)
Q Consensus 903 ~~~~~~~I~~~~~~~p~~ 920 (931)
..++...+..+...++..
T Consensus 230 ~~~~~~~~~~~~~~~~~~ 247 (285)
T 3is5_A 230 LEEVQQKATYKEPNYAVE 247 (285)
T ss_dssp HHHHHHHHHHCCCCCCC-
T ss_pred HHHHHhhhccCCcccccc
Confidence 988888887776655443
No 125
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=5.7e-35 Score=319.86 Aligned_cols=210 Identities=23% Similarity=0.384 Sum_probs=176.7
Q ss_pred ccccCCCccccccccccCcEEEEEEE----EecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVE----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~----~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (931)
..+..++|++++.||+|+||.||++. +..+++.||+|.+... .......+.+|+.+|+.++||||+++++++.
T Consensus 5 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 81 (295)
T 3ugc_A 5 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCY 81 (295)
T ss_dssp -CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred CcCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 45677899999999999999999998 5668999999998754 4455678899999999999999999999985
Q ss_pred e--CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccC
Q 002356 740 T--KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (931)
Q Consensus 740 ~--~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~ 817 (931)
. ...+++||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus 82 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 82 SAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp HHHHTSCEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred cCCCCceEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 4 456899999999999999998753 3489999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCC
Q 002356 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~P 897 (931)
+........ .........|++.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 161 ~~~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~ 216 (295)
T 3ugc_A 161 TKVLPQDKE------------------------FFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK 216 (295)
T ss_dssp CC-------------------------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCT
T ss_pred cccccCCcc------------------------eeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccc
Confidence 965432110 01112234578889999999999999999999999999999999999
Q ss_pred CCCC
Q 002356 898 FRGK 901 (931)
Q Consensus 898 f~~~ 901 (931)
|...
T Consensus 217 ~~~~ 220 (295)
T 3ugc_A 217 SKSP 220 (295)
T ss_dssp TCSH
T ss_pred cCCC
Confidence 8643
No 126
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=8.4e-35 Score=313.75 Aligned_cols=219 Identities=23% Similarity=0.333 Sum_probs=190.1
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+..++|++.+.||+|+||.||++.+. ++..||+|++..... ....+.+|+.+++.++||||+++++++......
T Consensus 4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 78 (268)
T 3sxs_A 4 ELKREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM----SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPI 78 (268)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred EechhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC----cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCce
Confidence 456789999999999999999999774 577899999976432 235688999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+||||+++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 79 YIVTEYISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp EEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred EEEEEccCCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 99999999999999997642 34899999999999999999999999999999999999999999999999998654211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~ 903 (931)
. ........||+.|+|||++.+..++.++|||||||++|+|++ |..||...+.
T Consensus 158 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~ 211 (268)
T 3sxs_A 158 Q--------------------------YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN 211 (268)
T ss_dssp C--------------------------EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred h--------------------------hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh
Confidence 1 011223457788999999998889999999999999999998 9999999999
Q ss_pred HHHHHHHHcCCC
Q 002356 904 QKTFANILHKDL 915 (931)
Q Consensus 904 ~~~~~~I~~~~~ 915 (931)
.+....+..+..
T Consensus 212 ~~~~~~~~~~~~ 223 (268)
T 3sxs_A 212 SEVVLKVSQGHR 223 (268)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 998888887754
No 127
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.9e-34 Score=326.94 Aligned_cols=213 Identities=24% Similarity=0.453 Sum_probs=179.6
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC----
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT---- 742 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~---- 742 (931)
..++|++++.||+|+||.||+|.+..+++.||+|++.... ........+.+|+.+++.++||||+++++++....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 101 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 101 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTT
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc-CChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccc
Confidence 3579999999999999999999999999999999997642 34456677889999999999999999999997654
Q ss_pred --eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 743 --HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 743 --~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
.+|+||||+. ++|.+++.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 102 ~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 102 FQDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp CCEEEEEEECCS-EEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ccceEEEEEcCC-CCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 7899999995 578888863 389999999999999999999999999999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+
T Consensus 177 ~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 228 (371)
T 2xrw_A 177 AGTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 228 (371)
T ss_dssp -----------------------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccc----------------------------cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 3210 112345799999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcC
Q 002356 901 KTRQKTFANILHK 913 (931)
Q Consensus 901 ~~~~~~~~~I~~~ 913 (931)
.+..+.+..|.+.
T Consensus 229 ~~~~~~~~~i~~~ 241 (371)
T 2xrw_A 229 TDHIDQWNKVIEQ 241 (371)
T ss_dssp SSHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHH
Confidence 9998888888764
No 128
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=6e-35 Score=323.72 Aligned_cols=235 Identities=17% Similarity=0.247 Sum_probs=198.3
Q ss_pred ccccccCCCccccccccccCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeE
Q 002356 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYA 736 (931)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~-----~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~ 736 (931)
..+.+..++|++.+.||+|+||.||++.+. .+++.||+|.+.... .......+.+|+.+++.++||||+++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 95 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLG 95 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence 345677789999999999999999999886 357899999987542 3345567889999999999999999999
Q ss_pred EEEeCCeEEEEEeccCCCCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q 002356 737 SFQTKTHVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (931)
Q Consensus 737 ~~~~~~~~~lVmE~~~ggsL~~~l~~~~--------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g 808 (931)
++...+..|+||||+.+++|.+++.... ...++...++.++.||+.||.|||++||+||||||+||+++.++
T Consensus 96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 96 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTC
T ss_pred EEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCC
Confidence 9999999999999999999999987521 13478999999999999999999999999999999999999999
Q ss_pred cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHH
Q 002356 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (931)
Q Consensus 809 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil 888 (931)
.+||+|||++....... .........||+.|+|||++.+..++.++|||||||++
T Consensus 176 ~~kl~Dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 230 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYETD-------------------------YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 230 (322)
T ss_dssp CEEECCTTCCCGGGGGG-------------------------CEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred eEEECcCcccccccccc-------------------------ccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHH
Confidence 99999999985432110 01122345678999999999988899999999999999
Q ss_pred HHHHc-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCcC
Q 002356 889 YEMLY-GYTPFRGKTRQKTFANILHKDL-KFPSSTPR 923 (931)
Q Consensus 889 ~ell~-G~~Pf~~~~~~~~~~~I~~~~~-~~p~~~~~ 923 (931)
|+|++ |..||.+.+..++...+..+.. ..|...+.
T Consensus 231 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (322)
T 1p4o_A 231 WEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD 267 (322)
T ss_dssp HHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCH
T ss_pred HHHHhcCCCccccCCHHHHHHHHHcCCcCCCCCCCCH
Confidence 99999 8999999999999998887654 45555443
No 129
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.2e-34 Score=312.10 Aligned_cols=226 Identities=23% Similarity=0.372 Sum_probs=193.7
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (931)
+.++.++|++.+.||+|+||.||++.+. +++.||+|.+..... ....+.+|+.+++.++||||+++++++...+.
T Consensus 3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 77 (267)
T 3t9t_A 3 WVIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP 77 (267)
T ss_dssp CBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred eEEchhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 3466789999999999999999999985 678899999976532 23568899999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
.|+||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 78 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 156 (267)
T 3t9t_A 78 ICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 156 (267)
T ss_dssp CEEEECCCTTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred eEEEEeCCCCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccc
Confidence 999999999999999998753 4589999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~ 902 (931)
. .........|++.|+|||++.+..++.++||||||+++|+|++ |++||.+.+
T Consensus 157 ~--------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 210 (267)
T 3t9t_A 157 D--------------------------QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 210 (267)
T ss_dssp H--------------------------HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred c--------------------------cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC
Confidence 0 0011223457889999999998889999999999999999999 999999999
Q ss_pred HHHHHHHHHcCC-CCCCCCC
Q 002356 903 RQKTFANILHKD-LKFPSST 921 (931)
Q Consensus 903 ~~~~~~~I~~~~-~~~p~~~ 921 (931)
..++...+..+. ...|...
T Consensus 211 ~~~~~~~i~~~~~~~~~~~~ 230 (267)
T 3t9t_A 211 NSEVVEDISTGFRLYKPRLA 230 (267)
T ss_dssp HHHHHHHHHTTCCCCCCTTS
T ss_pred HHHHHHHHhcCCcCCCCccC
Confidence 999999988774 3444433
No 130
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.3e-34 Score=312.00 Aligned_cols=223 Identities=18% Similarity=0.308 Sum_probs=192.0
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC--C
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--T 742 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~ 742 (931)
.+..++|++.+.||+|+||.||++.+ ++..||+|++.... ........+.+|+.+++.++||||+++++++... .
T Consensus 6 ~i~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 82 (271)
T 3kmu_A 6 GIDFKQLNFLTKLNENHSGELWKGRW--QGNDIVVKVLKVRD-WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82 (271)
T ss_dssp CCCGGGCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECCTT-CCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSS
T ss_pred CCCHHHhHHHHHhcCCCcceEEEEEE--CCeeEEEEEecccc-cCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCC
Confidence 45678999999999999999999998 48899999997653 2345567789999999999999999999999876 7
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g--IiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
..++||||+++++|.+++.......+++..++.++.||+.||.|||++| |+||||||+||+++.++.++|+|||++..
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp SCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred CeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceee
Confidence 8899999999999999998765556999999999999999999999999 99999999999999999999999998743
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCC---hhhHHHHHHHHHHHHcCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS---AVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~---~~DiwSlGvil~ell~G~~P 897 (931)
.. .....||+.|+|||++.+..++. ++|||||||++|+|++|+.|
T Consensus 163 ~~--------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p 210 (271)
T 3kmu_A 163 FQ--------------------------------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVP 210 (271)
T ss_dssp TS--------------------------------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCT
T ss_pred ec--------------------------------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 21 12346899999999998765554 79999999999999999999
Q ss_pred CCCCCHHHHHHHHHcCC--CCCCCCCc
Q 002356 898 FRGKTRQKTFANILHKD--LKFPSSTP 922 (931)
Q Consensus 898 f~~~~~~~~~~~I~~~~--~~~p~~~~ 922 (931)
|.+.+..+....+.... ..+|...+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (271)
T 3kmu_A 211 FADLSNMEIGMKVALEGLRPTIPPGIS 237 (271)
T ss_dssp TTTSCHHHHHHHHHHSCCCCCCCTTCC
T ss_pred ccccChHHHHHHHHhcCCCCCCCCCCC
Confidence 99999988888887654 34555444
No 131
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.7e-34 Score=318.52 Aligned_cols=221 Identities=22% Similarity=0.322 Sum_probs=181.0
Q ss_pred ccccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
..+.+..++|.+.+.||+|+||.||++.+.. .+|+|+++... ........+.+|+.+|+.++||||+++++++. .
T Consensus 29 ~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~---~~avk~~k~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~ 103 (307)
T 3lb7_A 29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVD-PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-K 103 (307)
T ss_dssp CCCBCCTTSCCEEEEEEECSSCEEEEEESSS---EEEEEECCCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-S
T ss_pred ceEEecccceEEEeEecCCCCeEEEEEEECC---EEEEEEEecCC-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-c
Confidence 3456888999999999999999999998643 58899886532 34556678899999999999999999999765 4
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
+..++||||+.|++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 104 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~ 182 (307)
T 3lb7_A 104 DNLAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp SSCEEEEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-
T ss_pred CcEEEEEecCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceec
Confidence 56899999999999999997543 45999999999999999999999999999999999999999999999999998643
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc---CCCCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
.... .........||+.|+|||++. +..++.++|||||||++|+|++|+.||
T Consensus 183 ~~~~-------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf 237 (307)
T 3lb7_A 183 SRWS-------------------------GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237 (307)
T ss_dssp ------------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred cccc-------------------------ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 2100 011223457999999999996 566888999999999999999999999
Q ss_pred CCCCHHHHHHHHHcC
Q 002356 899 RGKTRQKTFANILHK 913 (931)
Q Consensus 899 ~~~~~~~~~~~I~~~ 913 (931)
.+.+..+.+..+...
T Consensus 238 ~~~~~~~~~~~~~~~ 252 (307)
T 3lb7_A 238 SHINNRDQIIFMVGR 252 (307)
T ss_dssp TTCCCHHHHHHHHHH
T ss_pred ccCCcHHHHHHHHhc
Confidence 986665555444443
No 132
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=5.9e-35 Score=325.07 Aligned_cols=229 Identities=24% Similarity=0.331 Sum_probs=183.5
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEE----EEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYF----AMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~----AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (931)
.+..++|++.+.||+|+||.||++.+..+++.+ |+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 88 (327)
T 3poz_A 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLT 88 (327)
T ss_dssp ECCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEES
T ss_pred hcCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec
Confidence 456789999999999999999999998777654 667664321 23345678899999999999999999999987
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
.. .++||||+.+|+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 89 ~~-~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 89 ST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp SS-EEEEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred CC-eEEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 55 788999999999999998753 4599999999999999999999999999999999999999999999999999965
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 899 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~ 899 (931)
...... ........||+.|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus 167 ~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 221 (327)
T 3poz_A 167 LGAEEK-------------------------EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221 (327)
T ss_dssp HTTTCC--------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred ccCCcc-------------------------cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCcc
Confidence 432111 011223457889999999999999999999999999999999 999999
Q ss_pred CCCHHHHHHHHHcCC-CCCCCCCc
Q 002356 900 GKTRQKTFANILHKD-LKFPSSTP 922 (931)
Q Consensus 900 ~~~~~~~~~~I~~~~-~~~p~~~~ 922 (931)
+.+..++...+..+. +..|...+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~ 245 (327)
T 3poz_A 222 GIPASEISSILEKGERLPQPPICT 245 (327)
T ss_dssp TCCGGGHHHHHHTTCCCCCCTTBC
T ss_pred CCCHHHHHHHHHcCCCCCCCccCC
Confidence 988888877776654 34454433
No 133
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.3e-35 Score=326.82 Aligned_cols=233 Identities=21% Similarity=0.316 Sum_probs=190.0
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCCeE----EEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQY----FAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~----~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (931)
..+..++|++++.||+|+||.||++.+..++.. +|+|.+.... .......+.+|+.+++.++||||+++++++.
T Consensus 8 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 85 (325)
T 3kex_A 8 RIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP 85 (325)
T ss_dssp CBCCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT--SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC
T ss_pred hhcCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc--cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc
Confidence 346678999999999999999999999888765 6666664321 1222345678999999999999999999886
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 740 ~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
....++||||+.+++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 86 -~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 86 -GSSLQLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp -BSSEEEEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred -CCccEEEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCccc
Confidence 56789999999999999999764 2358999999999999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPF 898 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf 898 (931)
....... ........||+.|+|||++.+..++.++|||||||++|+|++ |..||
T Consensus 164 ~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~ 218 (325)
T 3kex_A 164 LLPPDDK-------------------------QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY 218 (325)
T ss_dssp GSCCCTT-------------------------CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred ccCcccc-------------------------cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCc
Confidence 5432111 111234568889999999998899999999999999999999 99999
Q ss_pred CCCCHHHHHHHHHcCC-CCCCCCCcCCh
Q 002356 899 RGKTRQKTFANILHKD-LKFPSSTPRSK 925 (931)
Q Consensus 899 ~~~~~~~~~~~I~~~~-~~~p~~~~~~~ 925 (931)
.+.+..++...+..+. +..|...+...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (325)
T 3kex_A 219 AGLRLAEVPDLLEKGERLAQPQICTIDV 246 (325)
T ss_dssp TTSCTTHHHHHHHTTCBCCCCTTBCTTT
T ss_pred cccCHHHHHHHHHcCCCCCCCCcCcHHH
Confidence 9988888888888764 55665554443
No 134
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.9e-34 Score=333.19 Aligned_cols=212 Identities=27% Similarity=0.453 Sum_probs=187.4
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc------CCCCccceeEEEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML------DHPFVPALYASFQ 739 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l------~hpnIv~l~~~~~ 739 (931)
....+|++++.||+|+||.||+|.+..+++.||||++... ......+.+|+.+++.+ +|+||+.+++++.
T Consensus 94 ~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~ 169 (429)
T 3kvw_A 94 HVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT 169 (429)
T ss_dssp EETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEE
T ss_pred cccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecc
Confidence 3456899999999999999999999999999999998753 33445677888888877 5779999999999
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc--EEEEeccC
Q 002356 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--VSLTDFDL 817 (931)
Q Consensus 740 ~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~--vkL~DFG~ 817 (931)
....+|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||+
T Consensus 170 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 170 FRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp ETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred cCCeEEEEEecc-CCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 999999999999 579999998876566999999999999999999999999999999999999999887 99999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCC
Q 002356 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~P 897 (931)
++... ......+||+.|+|||++.+..++.++|||||||+||+|++|.+|
T Consensus 249 a~~~~------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~p 298 (429)
T 3kvw_A 249 SCYEH------------------------------QRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPL 298 (429)
T ss_dssp CEETT------------------------------CCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred ceecC------------------------------CcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCC
Confidence 85432 112345799999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHc
Q 002356 898 FRGKTRQKTFANILH 912 (931)
Q Consensus 898 f~~~~~~~~~~~I~~ 912 (931)
|.+.+..+.+..|.+
T Consensus 299 f~~~~~~~~l~~i~~ 313 (429)
T 3kvw_A 299 LPGEDEGDQLACMIE 313 (429)
T ss_dssp SCCSSHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHH
Confidence 999999888887765
No 135
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=3.8e-34 Score=315.65 Aligned_cols=222 Identities=30% Similarity=0.445 Sum_probs=181.3
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
..++|++.+.||+|+||.||++.+..+++.||+|.+.............+.+|+.+++.++||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 45689999999999999999999999999999999987555556677888999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 747 ITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
||||+.+++|.+++... ....+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~ 189 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence 99999999999998741 2355899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCC--C
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK--T 902 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~--~ 902 (931)
........|++.|+|||++.+..++.++|||||||++|+|++|..||.+. +
T Consensus 190 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 242 (310)
T 2wqm_A 190 ---------------------------TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN 242 (310)
T ss_dssp ------------------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC
T ss_pred ---------------------------CccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh
Confidence 01122456899999999999999999999999999999999999999764 4
Q ss_pred HHHHHHHHHcCCC
Q 002356 903 RQKTFANILHKDL 915 (931)
Q Consensus 903 ~~~~~~~I~~~~~ 915 (931)
..++...+..+.+
T Consensus 243 ~~~~~~~~~~~~~ 255 (310)
T 2wqm_A 243 LYSLCKKIEQCDY 255 (310)
T ss_dssp HHHHHHHHHTTCS
T ss_pred HHHHHHHhhcccC
Confidence 4566666666554
No 136
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.8e-34 Score=321.59 Aligned_cols=216 Identities=25% Similarity=0.357 Sum_probs=185.0
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
..++|++++.||+|+||.||++.+..+++.||+|.+.... ........+.+|+.+++.++||||+++++++...+..|+
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC-CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence 4679999999999999999999999999999999987642 234455667899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
||||+.+++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 102 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 177 (331)
T 4aaa_A 102 VFEFVDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP-- 177 (331)
T ss_dssp EEECCSEEHHHHHHHST--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred EEecCCcchHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCC--
Confidence 99999999998887654 34999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
........||+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+
T Consensus 178 -------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 232 (331)
T 4aaa_A 178 -------------------------GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID 232 (331)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred -------------------------ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence 1112345689999999999875 68899999999999999999999999998887
Q ss_pred HHHHHHc
Q 002356 906 TFANILH 912 (931)
Q Consensus 906 ~~~~I~~ 912 (931)
.+..+..
T Consensus 233 ~~~~~~~ 239 (331)
T 4aaa_A 233 QLYHIMM 239 (331)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777653
No 137
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-34 Score=319.14 Aligned_cols=220 Identities=28% Similarity=0.424 Sum_probs=183.8
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEe---
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT--- 740 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~--- 740 (931)
....++|++.+.||+|+||.||++.+..+++.||+|++.... .....+.+|+.+++.+ +||||+++++++..
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (326)
T 2x7f_A 20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 95 (326)
T ss_dssp CCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC-
T ss_pred cCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc----ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC
Confidence 345679999999999999999999999999999999987542 2335678899999999 89999999999976
Q ss_pred ---CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccC
Q 002356 741 ---KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (931)
Q Consensus 741 ---~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~ 817 (931)
...+|+||||+.+++|.+++.......+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||+
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 175 (326)
T 2x7f_A 96 PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGV 175 (326)
T ss_dssp -CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTT
T ss_pred ccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcC
Confidence 56899999999999999999876445699999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc-----CCCCCChhhHHHHHHHHHHHH
Q 002356 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEML 892 (931)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~ell 892 (931)
+...... ........||+.|+|||++. ...++.++|||||||++|+|+
T Consensus 176 ~~~~~~~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~ 228 (326)
T 2x7f_A 176 SAQLDRT---------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 228 (326)
T ss_dssp TC----------------------------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHH
T ss_pred ceecCcC---------------------------ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHH
Confidence 8543210 01123457999999999997 566888999999999999999
Q ss_pred cCCCCCCCCCHHHHHHHHHcCCC
Q 002356 893 YGYTPFRGKTRQKTFANILHKDL 915 (931)
Q Consensus 893 ~G~~Pf~~~~~~~~~~~I~~~~~ 915 (931)
+|..||.+.+....+..+.....
T Consensus 229 ~g~~p~~~~~~~~~~~~~~~~~~ 251 (326)
T 2x7f_A 229 EGAPPLCDMHPMRALFLIPRNPA 251 (326)
T ss_dssp HSSCTTTTSCHHHHHHHHHHSCC
T ss_pred hCCCCCCCCcHHHHHHHhhcCcc
Confidence 99999999888887777766543
No 138
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.5e-34 Score=324.84 Aligned_cols=225 Identities=25% Similarity=0.318 Sum_probs=187.6
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe-------
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------- 740 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------- 740 (931)
.++|++++.||+|+||.||++.+..+++.||+|++..... .......+.+|+.+|+.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSC-SSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccc-cccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 5689999999999999999999999999999999866532 22334567789999999999999999999876
Q ss_pred -CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 741 -KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 741 -~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
.+.+|+||||+. ++|.+.+.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 95 ~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 95 CKGSIYLVFDFCE-HDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp --CEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CCceEEEEEeccC-CCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 457899999995 57887776543 459999999999999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
........ .........||+.|+|||++.+ ..++.++|||||||++|+|++|.+||
T Consensus 173 ~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf 229 (351)
T 3mi9_A 173 AFSLAKNS-----------------------QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM 229 (351)
T ss_dssp ECCCCSSS-----------------------SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred cccccccc-----------------------cccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCC
Confidence 54311110 1112235678999999999976 45789999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCCCCC
Q 002356 899 RGKTRQKTFANILHKDLKFP 918 (931)
Q Consensus 899 ~~~~~~~~~~~I~~~~~~~p 918 (931)
.+.+..+.+..|......+|
T Consensus 230 ~~~~~~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 230 QGNTEQHQLALISQLCGSIT 249 (351)
T ss_dssp CCSSHHHHHHHHHHHHCCCC
T ss_pred CCCChHHHHHHHHHHhCCCC
Confidence 99999988888876443333
No 139
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-34 Score=321.32 Aligned_cols=226 Identities=25% Similarity=0.397 Sum_probs=182.7
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCC--CCccceeEEEEeCCe
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYASFQTKTH 743 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~h--pnIv~l~~~~~~~~~ 743 (931)
+..++|++++.||+|+||.||++.+ .+++.||+|++.... ........+.+|+.+|+.+.| |||+++++++.....
T Consensus 6 ~~~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 83 (343)
T 3dbq_A 6 VKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 83 (343)
T ss_dssp SSSCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred eecCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccc-cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCE
Confidence 5677899999999999999999988 568899999997653 244556788999999999976 999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+|+|||+ .+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++.....
T Consensus 84 ~~lv~e~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~ 159 (343)
T 3dbq_A 84 IYMVMEC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 159 (343)
T ss_dssp EEEEECC-CSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred EEEEEeC-CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence 9999995 489999999875 4599999999999999999999999999999999999997 78999999999965431
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-----------CCCCChhhHHHHHHHHHHHH
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----------AGHTSAVDWWALGILLYEML 892 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-----------~~~~~~~DiwSlGvil~ell 892 (931)
... .......+||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 160 ~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell 214 (343)
T 3dbq_A 160 DTT-------------------------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 214 (343)
T ss_dssp -----------------------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHH
T ss_pred ccc-------------------------cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHH
Confidence 110 112235579999999999965 66788999999999999999
Q ss_pred cCCCCCCCC-CHHHHHHHHHcC--CCCCCCCCc
Q 002356 893 YGYTPFRGK-TRQKTFANILHK--DLKFPSSTP 922 (931)
Q Consensus 893 ~G~~Pf~~~-~~~~~~~~I~~~--~~~~p~~~~ 922 (931)
+|+.||... .....+..+... ...+|...+
T Consensus 215 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (343)
T 3dbq_A 215 YGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE 247 (343)
T ss_dssp HSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSC
T ss_pred hCCCcchhhhhHHHHHHHHhcCCcccCCcccCC
Confidence 999999864 334555555543 345555543
No 140
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.3e-34 Score=323.12 Aligned_cols=233 Identities=21% Similarity=0.336 Sum_probs=195.6
Q ss_pred ccccCCCccccccccccCcEEEEEEEEe-------cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCcccee
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELC-------GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALY 735 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~-------~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~ 735 (931)
+.+..++|++.+.||+|+||.||++.+. .++..||+|++.... .......+.+|+.+++.+ +||||++++
T Consensus 30 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 107 (334)
T 2pvf_A 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLL 107 (334)
T ss_dssp TBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEE
Confidence 4466789999999999999999999985 356789999987542 345567788999999999 899999999
Q ss_pred EEEEeCCeEEEEEeccCCCCHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCc
Q 002356 736 ASFQTKTHVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (931)
Q Consensus 736 ~~~~~~~~~~lVmE~~~ggsL~~~l~~~~~--------------~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~N 801 (931)
+++...+.+|+||||+.+++|.+++..... ..++...++.++.||+.||.|||++||+||||||+|
T Consensus 108 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N 187 (334)
T 2pvf_A 108 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN 187 (334)
T ss_dssp EEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred EEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccce
Confidence 999999999999999999999999986431 248999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhH
Q 002356 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (931)
Q Consensus 802 Ill~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~Di 881 (931)
||++.++.+||+|||++........ ........||+.|+|||++.+..++.++||
T Consensus 188 Ill~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 242 (334)
T 2pvf_A 188 VLVTENNVMKIADFGLARDINNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDV 242 (334)
T ss_dssp EEECTTCCEEECCCTTCEECTTTSS-------------------------EECCSCCCCCGGGCCHHHHHHCEECHHHHH
T ss_pred EEEcCCCCEEEcccccccccccccc-------------------------ccccCCCCcccceeChHHhcCCCcChHHHH
Confidence 9999999999999999865431110 011223457889999999988889999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCcC
Q 002356 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKD-LKFPSSTPR 923 (931)
Q Consensus 882 wSlGvil~ell~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~~~ 923 (931)
|||||++|+|++ |..||.+.+..+++..+..+. ..+|...+.
T Consensus 243 ~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (334)
T 2pvf_A 243 WSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTN 286 (334)
T ss_dssp HHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTCCH
T ss_pred HHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCCCCccCCH
Confidence 999999999999 999999999999998888764 455554443
No 141
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-34 Score=313.58 Aligned_cols=232 Identities=22% Similarity=0.345 Sum_probs=194.9
Q ss_pred cccCCCccccc-cccccCcEEEEEEEEe--cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 665 QINLQHFRPIK-PLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 665 ~~~~~~y~i~~-~LG~G~~g~Vy~~~~~--~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
.+..++|.+.. .||+|+||.||++.+. .++..||+|++... ........+.+|+.+++.++||||+++++++ ..
T Consensus 5 ~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~ 81 (287)
T 1u59_A 5 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QA 81 (287)
T ss_dssp BCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ES
T ss_pred cccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc--cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cC
Confidence 45667888887 9999999999999864 46889999999764 2445667889999999999999999999999 55
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
+..++||||+.+++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus 82 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 82 EALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp SSEEEEEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred CCcEEEEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 6799999999999999999754 345999999999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~ 900 (931)
...... ........||+.|+|||++.+..++.++|||||||++|+|++ |+.||.+
T Consensus 161 ~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 216 (287)
T 1u59_A 161 GADDSY------------------------YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK 216 (287)
T ss_dssp TTCSCE------------------------ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccCcce------------------------eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 321110 111223457899999999988889999999999999999998 9999999
Q ss_pred CCHHHHHHHHHcCC-CCCCCCCcCC
Q 002356 901 KTRQKTFANILHKD-LKFPSSTPRS 924 (931)
Q Consensus 901 ~~~~~~~~~I~~~~-~~~p~~~~~~ 924 (931)
.+..++...+..+. ..+|...+..
T Consensus 217 ~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (287)
T 1u59_A 217 MKGPEVMAFIEQGKRMECPPECPPE 241 (287)
T ss_dssp CCTHHHHHHHHTTCCCCCCTTCCHH
T ss_pred CCHHHHHHHHhcCCcCCCCCCcCHH
Confidence 99889988888764 5666655543
No 142
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.1e-35 Score=326.86 Aligned_cols=213 Identities=25% Similarity=0.401 Sum_probs=178.5
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|.+++.||+|+||.||++.+..+++.||+|++..... ......+.+|+.+|+.++||||+++++++...+..|+||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 79 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc--cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence 689999999999999999999999999999999865421 111123457999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~---- 153 (324)
T 3mtl_A 80 EYLD-KDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP---- 153 (324)
T ss_dssp ECCS-EEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCC----
Confidence 9995 69999987653 45999999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
........||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+
T Consensus 154 -----------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 210 (324)
T 3mtl_A 154 -----------------------TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQL 210 (324)
T ss_dssp --------------------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred -----------------------ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 111224568999999999976 56889999999999999999999999999998888
Q ss_pred HHHHc
Q 002356 908 ANILH 912 (931)
Q Consensus 908 ~~I~~ 912 (931)
..+.+
T Consensus 211 ~~i~~ 215 (324)
T 3mtl_A 211 HFIFR 215 (324)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88866
No 143
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4e-34 Score=313.28 Aligned_cols=224 Identities=29% Similarity=0.444 Sum_probs=194.8
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeeccccc------ChHHHHHHHHHHHHHHhcC-CCCccceeEEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML------NRNKVHRACAEREILDMLD-HPFVPALYASFQ 739 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~------~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~ 739 (931)
..++|++.+.||+|+||.||++.+..+++.||+|++...... .......+.+|+.+++.+. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 357999999999999999999999999999999999764311 1233566789999999995 999999999999
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 740 ~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
.....|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 172 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC 172 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchh
Confidence 999999999999999999999864 349999999999999999999999999999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc------CCCCCChhhHHHHHHHHHHHHc
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA------GAGHTSAVDWWALGILLYEMLY 893 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~------~~~~~~~~DiwSlGvil~ell~ 893 (931)
..... .......||+.|+|||++. ...++.++|||||||++|+|++
T Consensus 173 ~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~ 224 (298)
T 1phk_A 173 QLDPG----------------------------EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224 (298)
T ss_dssp ECCTT----------------------------CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHH
T ss_pred hcCCC----------------------------cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHH
Confidence 43211 1123456899999999985 4567889999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCC
Q 002356 894 GYTPFRGKTRQKTFANILHKDLKFPSS 920 (931)
Q Consensus 894 G~~Pf~~~~~~~~~~~I~~~~~~~p~~ 920 (931)
|..||.+.+..+....+..+.+.+|..
T Consensus 225 g~~p~~~~~~~~~~~~~~~~~~~~~~~ 251 (298)
T 1phk_A 225 GSPPFWHRKQMLMLRMIMSGNYQFGSP 251 (298)
T ss_dssp SSCSSCCSSHHHHHHHHHHTCCCCCTT
T ss_pred CCCCCcCccHHHHHHHHhcCCcccCcc
Confidence 999999999999999999988776643
No 144
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.5e-34 Score=327.24 Aligned_cols=211 Identities=27% Similarity=0.443 Sum_probs=177.6
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe-----
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----- 740 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~----- 740 (931)
...++|++.+.||+|+||.||+|.+..+++.||+|.+..... ...+|+.+|+.++||||++++++|..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-------hHHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 346789999999999999999999999999999999865421 12369999999999999999999843
Q ss_pred ---------------------------------CCeEEEEEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHH
Q 002356 741 ---------------------------------KTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALE 785 (931)
Q Consensus 741 ---------------------------------~~~~~lVmE~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~ 785 (931)
..++++||||++ ++|.+.+.. .....+++..++.++.||+.||.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 345899999996 688877763 23456999999999999999999
Q ss_pred HHHHCCCccCCCCCCcEEEe-cCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcc
Q 002356 786 YLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEY 864 (931)
Q Consensus 786 ~LH~~gIiHrDIKP~NIll~-~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y 864 (931)
|||++||+||||||+|||++ .++.+||+|||++...... .......||+.|
T Consensus 156 ~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~----------------------------~~~~~~~~t~~y 207 (383)
T 3eb0_A 156 FIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS----------------------------EPSVAYICSRFY 207 (383)
T ss_dssp HHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT----------------------------SCCCCCCCCSSC
T ss_pred HHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC----------------------------CCCcCcccCCCc
Confidence 99999999999999999998 5889999999999643211 112345789999
Q ss_pred cchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc
Q 002356 865 IAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 912 (931)
Q Consensus 865 ~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~ 912 (931)
+|||++.+. .++.++|||||||++|+|++|++||.+.+..+.+..|.+
T Consensus 208 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~ 256 (383)
T 3eb0_A 208 RAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQ 256 (383)
T ss_dssp CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred cCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 999999875 489999999999999999999999999999888888765
No 145
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3e-34 Score=327.43 Aligned_cols=225 Identities=24% Similarity=0.395 Sum_probs=184.4
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC--CCCccceeEEEEeCCe
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD--HPFVPALYASFQTKTH 743 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~--hpnIv~l~~~~~~~~~ 743 (931)
+...+|++.+.||+|+||.||++.+.. ++.||||++..... .......+.+|+.+|+.+. ||||+++++++...+.
T Consensus 53 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~ 130 (390)
T 2zmd_A 53 VKGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 130 (390)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred ccCCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCE
Confidence 445679999999999999999999854 89999999976533 4556678899999999996 5999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+|+||| +.+++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++.....
T Consensus 131 ~~lv~E-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 131 IYMVME-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp EEEEEE-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred EEEEEe-cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 999999 45899999998753 589999999999999999999999999999999999995 68999999999965421
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-----------CCCCChhhHHHHHHHHHHHH
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----------AGHTSAVDWWALGILLYEML 892 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-----------~~~~~~~DiwSlGvil~ell 892 (931)
... .......+||+.|+|||++.+ ..++.++|||||||+||+|+
T Consensus 207 ~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell 261 (390)
T 2zmd_A 207 DTT-------------------------SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 261 (390)
T ss_dssp --------------------------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHH
T ss_pred CCc-------------------------cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHH
Confidence 100 011235679999999999975 36788999999999999999
Q ss_pred cCCCCCCCC-CHHHHHHHHHcCCC--CCCCCC
Q 002356 893 YGYTPFRGK-TRQKTFANILHKDL--KFPSST 921 (931)
Q Consensus 893 ~G~~Pf~~~-~~~~~~~~I~~~~~--~~p~~~ 921 (931)
+|++||.+. .....+..++.... .+|...
T Consensus 262 ~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (390)
T 2zmd_A 262 YGKTPFQQIINQISKLHAIIDPNHEIEFPDIP 293 (390)
T ss_dssp HSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCS
T ss_pred HCCCcchhhhHHHHHHHHHhCccccCCCCccc
Confidence 999999875 44566777776544 455444
No 146
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.3e-34 Score=316.92 Aligned_cols=221 Identities=22% Similarity=0.305 Sum_probs=186.2
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCe
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (931)
.+..++|++.+.||+|+||.||++.+..+++.||+|++.... ....+.+|+.+++.+ +|+|++.+++++.....
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~ 80 (298)
T 1csn_A 6 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLH 80 (298)
T ss_dssp CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTE
T ss_pred cccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCce
Confidence 355789999999999999999999999999999999986542 223467899999999 89999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc-----EEEEeccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-----VSLTDFDLS 818 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~-----vkL~DFG~a 818 (931)
.|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||++
T Consensus 81 ~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~ 158 (298)
T 1csn_A 81 NVLVIDLL-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158 (298)
T ss_dssp EEEEEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred eEEEEEec-CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence 99999999 999999998753 45999999999999999999999999999999999999987776 999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
......... ...+........||+.|+|||++.+..++.++|||||||++|+|++|+.||
T Consensus 159 ~~~~~~~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 218 (298)
T 1csn_A 159 KFYRDPVTK--------------------QHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 218 (298)
T ss_dssp EESBCTTTC--------------------CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred ccccccccc--------------------ccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCc
Confidence 654321110 011122345678999999999999999999999999999999999999999
Q ss_pred CCC---CHHHHHHHHHc
Q 002356 899 RGK---TRQKTFANILH 912 (931)
Q Consensus 899 ~~~---~~~~~~~~I~~ 912 (931)
.+. ...+.+..+..
T Consensus 219 ~~~~~~~~~~~~~~~~~ 235 (298)
T 1csn_A 219 QGLKAATNKQKYERIGE 235 (298)
T ss_dssp SSCCSCCHHHHHHHHHH
T ss_pred chhhccccHHHHHHHHh
Confidence 873 44555555543
No 147
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=8.4e-35 Score=329.14 Aligned_cols=210 Identities=29% Similarity=0.459 Sum_probs=169.8
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC------
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (931)
.++|++++.||+|+||.||++.+..+++.||+|++.... ........+.+|+.+|+.++||||+++++++...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 479999999999999999999999999999999987642 3445667888999999999999999999998654
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
..+|+||||+ +++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp CCCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred CeEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 5689999999 8999999875 34999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+
T Consensus 183 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 232 (367)
T 2fst_X 183 AD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232 (367)
T ss_dssp --------------------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cc------------------------------cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 20 1124579999999999987 6788999999999999999999999999
Q ss_pred CCHHHHHHHHHc
Q 002356 901 KTRQKTFANILH 912 (931)
Q Consensus 901 ~~~~~~~~~I~~ 912 (931)
.+..+.+..|.+
T Consensus 233 ~~~~~~l~~i~~ 244 (367)
T 2fst_X 233 TDHIDQLKLILR 244 (367)
T ss_dssp SSHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 998888887765
No 148
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=6.1e-35 Score=316.63 Aligned_cols=228 Identities=26% Similarity=0.484 Sum_probs=194.3
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe--CCeEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVC 745 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~~ 745 (931)
.++|++.+.||+|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++.. ...+|
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 4689999999999999999999999999999999976533 34556788999999999999999999998753 67899
Q ss_pred EEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-----CccCCCCCCcEEEecCCcEEEEeccCC
Q 002356 746 LITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQG-----IIYRDLKPENVLLQGNGHVSLTDFDLS 818 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~g-----IiHrDIKP~NIll~~~g~vkL~DFG~a 818 (931)
+||||+++++|.+++... ....+++..++.++.||+.||.|||++| |+||||||+||+++.++.+||+|||++
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~ 163 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence 999999999999999753 2345899999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
....... .......||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus 164 ~~~~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~ 216 (279)
T 2w5a_A 164 RILNHDT---------------------------SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216 (279)
T ss_dssp HHC---C---------------------------HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred eeecccc---------------------------ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 5432110 0112356899999999999988999999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCC-CCCCCCcC
Q 002356 899 RGKTRQKTFANILHKDL-KFPSSTPR 923 (931)
Q Consensus 899 ~~~~~~~~~~~I~~~~~-~~p~~~~~ 923 (931)
.+.+..++...+..+.. .+|...+.
T Consensus 217 ~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (279)
T 2w5a_A 217 TAFSQKELAGKIREGKFRRIPYRYSD 242 (279)
T ss_dssp CCSSHHHHHHHHHHTCCCCCCTTSCH
T ss_pred cccCHHHHHHHHhhcccccCCcccCH
Confidence 99999999999988876 55554443
No 149
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-34 Score=319.98 Aligned_cols=233 Identities=22% Similarity=0.302 Sum_probs=190.7
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCC----eEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~----~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (931)
..+...+|++.+.||+|+||.||++.+..++ ..||+|.+.... .......+.+|+.+++.++||||+++++++.
T Consensus 39 ~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 116 (333)
T 1mqb_A 39 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS 116 (333)
T ss_dssp CBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred ccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe
Confidence 4567889999999999999999999987553 469999987542 3445567889999999999999999999999
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 740 ~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
..+..|+||||+.+++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 117 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 117 KYKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp SSSSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred cCCCcEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcch
Confidence 9999999999999999999997643 459999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPF 898 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf 898 (931)
........ ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||
T Consensus 196 ~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf 251 (333)
T 1mqb_A 196 VLEDDPEA------------------------TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY 251 (333)
T ss_dssp ---------------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred hhcccccc------------------------ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCc
Confidence 54321100 011122346889999999999999999999999999999998 99999
Q ss_pred CCCCHHHHHHHHHcC-CCCCCCCCcC
Q 002356 899 RGKTRQKTFANILHK-DLKFPSSTPR 923 (931)
Q Consensus 899 ~~~~~~~~~~~I~~~-~~~~p~~~~~ 923 (931)
.+.+..+++..+..+ .+..|...+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (333)
T 1mqb_A 252 WELSNHEVMKAINDGFRLPTPMDCPS 277 (333)
T ss_dssp TTCCHHHHHHHHHTTCCCCCCTTCBH
T ss_pred ccCCHHHHHHHHHCCCcCCCcccCCH
Confidence 999999999888876 3455554443
No 150
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.1e-34 Score=322.60 Aligned_cols=232 Identities=20% Similarity=0.285 Sum_probs=189.8
Q ss_pred ccccCCCccccccccccCcEEEEEEE-----EecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEE
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVE-----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF 738 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~-----~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~ 738 (931)
..+..++|++.+.||+|+||.||++. +..+++.||+|.+.... .......+.+|+.+++.++||||+++++++
T Consensus 25 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 102 (327)
T 2yfx_A 25 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVS 102 (327)
T ss_dssp CBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc--chhhHHHHHHHHHHHhhCCCCCCCeEEEEE
Confidence 34677899999999999999999999 55678899999986432 344556788999999999999999999999
Q ss_pred EeCCeEEEEEeccCCCCHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec---CCcE
Q 002356 739 QTKTHVCLITDYCPGGELFLLLDRQPT-----KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHV 810 (931)
Q Consensus 739 ~~~~~~~lVmE~~~ggsL~~~l~~~~~-----~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~---~g~v 810 (931)
......|+||||+++++|.+++..... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+
T Consensus 103 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~ 182 (327)
T 2yfx_A 103 LQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 182 (327)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred cCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceE
Confidence 999999999999999999999986532 34899999999999999999999999999999999999984 4469
Q ss_pred EEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHH
Q 002356 811 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 890 (931)
Q Consensus 811 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 890 (931)
||+|||++....... .........||+.|+|||++.+..++.++|||||||++|+
T Consensus 183 kl~Dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e 237 (327)
T 2yfx_A 183 KIGDFGMARDIYRAS-------------------------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 237 (327)
T ss_dssp EECCCHHHHHHHC-------------------------------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred EECcccccccccccc-------------------------ccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHH
Confidence 999999985432110 0112234568999999999998889999999999999999
Q ss_pred HHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCc
Q 002356 891 MLY-GYTPFRGKTRQKTFANILHKD-LKFPSSTP 922 (931)
Q Consensus 891 ll~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~~ 922 (931)
|++ |..||.+.+..+++..+..+. ...|...+
T Consensus 238 llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (327)
T 2yfx_A 238 IFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCP 271 (327)
T ss_dssp HHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCC
T ss_pred HHcCCCCCCCCcCHHHHHHHHhcCCCCCCCCCCC
Confidence 998 999999999999998888764 34554443
No 151
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=322.49 Aligned_cols=229 Identities=24% Similarity=0.331 Sum_probs=185.3
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEE----EEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYF----AMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~----AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (931)
.+..++|++++.||+|+||.||++.+..+++.+ |+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 88 (327)
T 3lzb_A 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLT 88 (327)
T ss_dssp ECCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS--SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES
T ss_pred ccCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec
Confidence 466789999999999999999999998887755 555554321 23355778899999999999999999999987
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
.. .++||+|+.+++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 89 ~~-~~~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 89 ST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp SS-EEEEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred CC-ceEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 55 788999999999999998753 4599999999999999999999999999999999999999999999999999965
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 899 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~ 899 (931)
...... ........||+.|+|||++.+..++.++|||||||++|+|++ |.+||.
T Consensus 167 ~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~ 221 (327)
T 3lzb_A 167 LGAEEK-------------------------EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221 (327)
T ss_dssp --------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred ccCccc-------------------------cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCC
Confidence 431111 011223457889999999999999999999999999999999 999999
Q ss_pred CCCHHHHHHHHHcCC-CCCCCCCc
Q 002356 900 GKTRQKTFANILHKD-LKFPSSTP 922 (931)
Q Consensus 900 ~~~~~~~~~~I~~~~-~~~p~~~~ 922 (931)
+.+..++...+..+. +..|...+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~ 245 (327)
T 3lzb_A 222 GIPASEISSILEKGERLPQPPICT 245 (327)
T ss_dssp TCCGGGHHHHHHTTCCCCCCTTBC
T ss_pred CCCHHHHHHHHHcCCCCCCCccCC
Confidence 988888887777654 45554443
No 152
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.3e-34 Score=324.56 Aligned_cols=209 Identities=27% Similarity=0.458 Sum_probs=184.3
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+..++|++++.||+|+||.||++.+..+++.||+|++.... .......+.+|+.+|+.++||||+++++++...+..
T Consensus 29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 106 (360)
T 3eqc_A 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI 106 (360)
T ss_dssp CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEE
T ss_pred ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEE
Confidence 456789999999999999999999999999999999997652 345567889999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
|+||||++|++|.+++.... .+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++.....
T Consensus 107 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 107 SICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp EEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EEEEECCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999999999998753 499999999999999999999996 999999999999999999999999999843210
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.
T Consensus 185 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 235 (360)
T 3eqc_A 185 -----------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA 235 (360)
T ss_dssp -----------------------------HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCH
T ss_pred -----------------------------ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 112345799999999999999999999999999999999999999987766
Q ss_pred HHH
Q 002356 904 QKT 906 (931)
Q Consensus 904 ~~~ 906 (931)
.++
T Consensus 236 ~~~ 238 (360)
T 3eqc_A 236 KEL 238 (360)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 153
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.8e-35 Score=327.84 Aligned_cols=203 Identities=27% Similarity=0.465 Sum_probs=177.2
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccCh-----HHHHHHHHHHHHHHhcCCCCccceeEEEEeCC
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-----NKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (931)
.++|++.+.||+|+||.||++.+..+++.||+|++.+...... .....+.+|+.+|+.++||||+++++++...+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 4689999999999999999999999999999999987543221 13345677999999999999999999999999
Q ss_pred eEEEEEeccCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 743 HVCLITDYCPGG-ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 743 ~~~lVmE~~~gg-sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
.+++||||+.+| +|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 180 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence 999999999766 999999875 34999999999999999999999999999999999999999999999999998653
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCC-CChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
... .......||+.|+|||++.+..+ +.++|||||||++|+|++|..||..
T Consensus 181 ~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 232 (335)
T 3dls_A 181 ERG----------------------------KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE 232 (335)
T ss_dssp CTT----------------------------CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred CCC----------------------------CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence 211 11234579999999999988877 7799999999999999999999965
No 154
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.4e-34 Score=313.94 Aligned_cols=229 Identities=24% Similarity=0.370 Sum_probs=192.6
Q ss_pred ccccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
..+.+..++|++.+.||+|+||.||++.+. ++..||+|.+..... ....+.+|+.+|+.++||||+++++++. .
T Consensus 6 ~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~ 79 (279)
T 1qpc_A 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLYAVVT-Q 79 (279)
T ss_dssp CTTBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred hhcccCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc----cHHHHHHHHHHHHhCCCcCcceEEEEEc-C
Confidence 456677889999999999999999999974 577899999876432 3467889999999999999999999876 4
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
+..++||||+.+++|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus 80 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 159 (279)
T 1qpc_A 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 159 (279)
T ss_dssp SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred CCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccc
Confidence 56899999999999999997543235999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~ 900 (931)
.... ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 160 ~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 213 (279)
T 1qpc_A 160 EDNE--------------------------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213 (279)
T ss_dssp SSSC--------------------------EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred cCcc--------------------------cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcc
Confidence 3111 011223457889999999988888999999999999999999 9999999
Q ss_pred CCHHHHHHHHHcCC-CCCCCCCc
Q 002356 901 KTRQKTFANILHKD-LKFPSSTP 922 (931)
Q Consensus 901 ~~~~~~~~~I~~~~-~~~p~~~~ 922 (931)
.+..+++..+.++. ...|...+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~ 236 (279)
T 1qpc_A 214 MTNPEVIQNLERGYRMVRPDNCP 236 (279)
T ss_dssp CCHHHHHHHHHTTCCCCCCTTCC
T ss_pred cCHHHHHHHHhcccCCCCccccc
Confidence 99999988887763 34444443
No 155
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=3.8e-34 Score=311.87 Aligned_cols=225 Identities=24% Similarity=0.388 Sum_probs=184.3
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHH----HHHHHHHHHHHhcCCCCccceeEEEEe
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKV----HRACAEREILDMLDHPFVPALYASFQT 740 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (931)
.+..++|++.+.||+|+||.||++.+..+++.||+|++........... ..+.+|+.+++.++||||+++++++..
T Consensus 15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 94 (287)
T 4f0f_A 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN 94 (287)
T ss_dssp BCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT
T ss_pred hhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC
Confidence 3567899999999999999999999999999999999876533222221 678899999999999999999999876
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCCCcEEEecCCc-----EEEE
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGH-----VSLT 813 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g--IiHrDIKP~NIll~~~g~-----vkL~ 813 (931)
.. ++||||+++++|.+++.... ..+++..++.++.||+.||.|||++| |+||||||+|||++.++. +||+
T Consensus 95 ~~--~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 95 PP--RMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp TT--EEEEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred CC--eEEEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 65 69999999999999887543 45999999999999999999999999 999999999999988776 9999
Q ss_pred eccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc--CCCCCChhhHHHHHHHHHHH
Q 002356 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA--GAGHTSAVDWWALGILLYEM 891 (931)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~--~~~~~~~~DiwSlGvil~el 891 (931)
|||++.... .......||+.|+|||++. ...++.++|||||||++|+|
T Consensus 172 Dfg~~~~~~------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l 221 (287)
T 4f0f_A 172 DFGLSQQSV------------------------------HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTI 221 (287)
T ss_dssp CCTTCBCCS------------------------------SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHH
T ss_pred CCCcccccc------------------------------ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHH
Confidence 999985321 1122457999999999984 45567899999999999999
Q ss_pred HcCCCCCCCCCHH--HHHHHHHcCC--CCCCCCCc
Q 002356 892 LYGYTPFRGKTRQ--KTFANILHKD--LKFPSSTP 922 (931)
Q Consensus 892 l~G~~Pf~~~~~~--~~~~~I~~~~--~~~p~~~~ 922 (931)
++|+.||...+.. .....+.... ..+|...+
T Consensus 222 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (287)
T 4f0f_A 222 LTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCP 256 (287)
T ss_dssp HHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSC
T ss_pred HcCCCCCccccccHHHHHHHHhccCCCCCCCcccC
Confidence 9999999865443 3355555443 34554443
No 156
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.5e-34 Score=315.11 Aligned_cols=216 Identities=25% Similarity=0.418 Sum_probs=184.8
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++.+.||+|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCcc-chhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEE
Confidence 4689999999999999999999999999999999875422 222346678899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 81 ~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--- 156 (299)
T 2r3i_A 81 FEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--- 156 (299)
T ss_dssp EECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC---
T ss_pred EEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCC---
Confidence 99995 69999998765556999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC-CCChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
........||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+.
T Consensus 157 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~ 212 (299)
T 2r3i_A 157 ------------------------VRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212 (299)
T ss_dssp ------------------------SBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred ------------------------ccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence 11122346899999999998765 78899999999999999999999999998888
Q ss_pred HHHHHc
Q 002356 907 FANILH 912 (931)
Q Consensus 907 ~~~I~~ 912 (931)
+..+.+
T Consensus 213 ~~~~~~ 218 (299)
T 2r3i_A 213 LFRIFR 218 (299)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877765
No 157
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.1e-34 Score=314.74 Aligned_cols=232 Identities=22% Similarity=0.332 Sum_probs=191.3
Q ss_pred ccccCCCccccc-cccccCcEEEEEEEE--ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe
Q 002356 664 EQINLQHFRPIK-PLGSGDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (931)
Q Consensus 664 ~~~~~~~y~i~~-~LG~G~~g~Vy~~~~--~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (931)
..+..++|++.+ .||+|+||.||++.+ ..+++.||+|++.... ........+.+|+.+++.++||||+++++++ .
T Consensus 11 ~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~ 88 (291)
T 1xbb_A 11 VYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGIC-E 88 (291)
T ss_dssp CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E
T ss_pred eeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C
Confidence 345677899998 999999999999955 4567899999997653 2344567889999999999999999999998 5
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
.+..|+||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++..
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 89 AESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred CCCcEEEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 67789999999999999999875 3499999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 899 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~ 899 (931)
....... ........|++.|+|||++.+..++.++|||||||++|+|++ |+.||.
T Consensus 167 ~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~ 222 (291)
T 1xbb_A 167 LRADENY------------------------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 222 (291)
T ss_dssp CCTTCSE------------------------EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred eccCCCc------------------------ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCC
Confidence 4321110 011123357789999999988888999999999999999999 999999
Q ss_pred CCCHHHHHHHHHcCC-CCCCCCCcC
Q 002356 900 GKTRQKTFANILHKD-LKFPSSTPR 923 (931)
Q Consensus 900 ~~~~~~~~~~I~~~~-~~~p~~~~~ 923 (931)
+.+..++...+..+. ..+|...+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (291)
T 1xbb_A 223 GMKGSEVTAMLEKGERMGCPAGCPR 247 (291)
T ss_dssp TCCHHHHHHHHHTTCCCCCCTTCCH
T ss_pred CCCHHHHHHHHHcCCCCCCCCCCCH
Confidence 999988888887764 455555443
No 158
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=7e-34 Score=310.38 Aligned_cols=217 Identities=24% Similarity=0.389 Sum_probs=184.8
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe----
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT---- 740 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~---- 740 (931)
......|.+.+.||+|+||.||++.+..++..||+|.+..... .......+.+|+.+|+.++||||+++++++..
T Consensus 22 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (290)
T 1t4h_A 22 SNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG 100 (290)
T ss_dssp CTTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSS
T ss_pred ccCceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCC
Confidence 3455679999999999999999999999999999999976533 45566788999999999999999999999875
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCCCcEEEe-cCCcEEEEeccC
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQ-GNGHVSLTDFDL 817 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g--IiHrDIKP~NIll~-~~g~vkL~DFG~ 817 (931)
...+|+||||+++++|.+++... ..+++..++.++.||+.||.|||++| |+||||||+|||++ .++.+||+|||+
T Consensus 101 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 101 KKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp CEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred CceEEEEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 46789999999999999999874 34899999999999999999999999 99999999999997 788999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCC
Q 002356 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~P 897 (931)
+..... .......||+.|+|||++.+ .++.++|||||||++|+|++|+.|
T Consensus 179 ~~~~~~-----------------------------~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p 228 (290)
T 1t4h_A 179 ATLKRA-----------------------------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYP 228 (290)
T ss_dssp GGGCCT-----------------------------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred cccccc-----------------------------cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCC
Confidence 854321 11224569999999998874 589999999999999999999999
Q ss_pred CCC-CCHHHHHHHHHcCC
Q 002356 898 FRG-KTRQKTFANILHKD 914 (931)
Q Consensus 898 f~~-~~~~~~~~~I~~~~ 914 (931)
|.+ .+...++..+..+.
T Consensus 229 f~~~~~~~~~~~~~~~~~ 246 (290)
T 1t4h_A 229 YSECQNAAQIYRRVTSGV 246 (290)
T ss_dssp TTTCSSHHHHHHHHTTTC
T ss_pred CCCcCcHHHHHHHHhccC
Confidence 987 44455555555543
No 159
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.4e-34 Score=322.50 Aligned_cols=225 Identities=23% Similarity=0.362 Sum_probs=189.7
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCCe-----EEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEE
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQ-----YFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS 737 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~-----~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~ 737 (931)
..+..++|.+.+.||+|+||.||++.+..+++ .||+|.+.... .......+.+|+.+++.+ +||||++++++
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 118 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGA 118 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence 45677899999999999999999999976654 89999987642 344567788999999999 89999999999
Q ss_pred EEeCCeEEEEEeccCCCCHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEe
Q 002356 738 FQTKTHVCLITDYCPGGELFLLLDRQP------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ 805 (931)
Q Consensus 738 ~~~~~~~~lVmE~~~ggsL~~~l~~~~------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~ 805 (931)
+...+.+|+||||+++|+|.+++.... ...++...++.++.||+.||.|||++||+||||||+|||++
T Consensus 119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 119 CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT 198 (333)
T ss_dssp ECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEE
T ss_pred EecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEEC
Confidence 999999999999999999999997531 23589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHH
Q 002356 806 GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALG 885 (931)
Q Consensus 806 ~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG 885 (931)
.++.+||+|||++....... .........||+.|+|||++.+..++.++||||||
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 253 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDS-------------------------NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 253 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCT-------------------------TSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred CCCeEEECcccccccccccc-------------------------ceeecCCCCCCccccCHHHhccCCCChHHHHHHHH
Confidence 99999999999986432111 01122345678899999999988899999999999
Q ss_pred HHHHHHHc-CCCCCCCCCHHHHHHHHHcCCC
Q 002356 886 ILLYEMLY-GYTPFRGKTRQKTFANILHKDL 915 (931)
Q Consensus 886 vil~ell~-G~~Pf~~~~~~~~~~~I~~~~~ 915 (931)
|++|+|++ |..||.+......+..+.....
T Consensus 254 ~il~el~t~g~~p~~~~~~~~~~~~~~~~~~ 284 (333)
T 2i1m_A 254 ILLWEIFSLGLNPYPGILVNSKFYKLVKDGY 284 (333)
T ss_dssp HHHHHHTTTSCCSSTTCCSSHHHHHHHHHTC
T ss_pred HHHHHHHcCCCCCCcccchhHHHHHHHhcCC
Confidence 99999998 9999998776666666655433
No 160
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-34 Score=324.24 Aligned_cols=216 Identities=29% Similarity=0.428 Sum_probs=179.7
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccCh--HHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR--NKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
.++|++.+.||+|+||.||++.+..+++.||+|++........ .....+.+|+.+++.++||||+++++++...+..|
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 5689999999999999999999999999999999875432111 11246778999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
+||||+.+ +|..++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 89 lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~- 165 (346)
T 1ua2_A 89 LVFDFMET-DLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP- 165 (346)
T ss_dssp EEEECCSE-EHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC-
T ss_pred EEEEcCCC-CHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCC-
Confidence 99999965 8998887643 45889999999999999999999999999999999999999999999999998654211
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
........||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..
T Consensus 166 --------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~ 219 (346)
T 1ua2_A 166 --------------------------NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL 219 (346)
T ss_dssp --------------------------CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred --------------------------cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH
Confidence 1122345789999999999764 4788999999999999999999999999998
Q ss_pred HHHHHHHc
Q 002356 905 KTFANILH 912 (931)
Q Consensus 905 ~~~~~I~~ 912 (931)
+.+.+|.+
T Consensus 220 ~~~~~i~~ 227 (346)
T 1ua2_A 220 DQLTRIFE 227 (346)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88888876
No 161
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.3e-34 Score=319.68 Aligned_cols=214 Identities=23% Similarity=0.381 Sum_probs=173.4
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC-----
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 742 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 742 (931)
.++|++.+.||+|+||.||+|.+..+++.||||++.... .......+.+|+.+|+.++||||++++++|....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 357999999999999999999999999999999997643 3345677899999999999999999999985533
Q ss_pred ----------------------------------------------------eEEEEEeccCCCCHHHHHhhCCC-CCCC
Q 002356 743 ----------------------------------------------------HVCLITDYCPGGELFLLLDRQPT-KVLK 769 (931)
Q Consensus 743 ----------------------------------------------------~~~lVmE~~~ggsL~~~l~~~~~-~~l~ 769 (931)
++|+|||||+|++|.+++..... ...+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 162 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence 48999999999999999986532 2356
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccc
Q 002356 770 EDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 849 (931)
Q Consensus 770 ~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (931)
...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++............ ....
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~---------------~~~~ 227 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV---------------LTPM 227 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC-------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccc---------------cccc
Confidence 6678999999999999999999999999999999999999999999999765422110000 0000
Q ss_pred cccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 850 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 850 ~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
..........||+.|+|||++.+..++.++|||||||++|+|++|..|+
T Consensus 228 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~ 276 (332)
T 3qd2_B 228 PAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQ 276 (332)
T ss_dssp ----CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCH
T ss_pred cccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCCh
Confidence 0112334568999999999999999999999999999999999998876
No 162
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=6.6e-34 Score=312.64 Aligned_cols=222 Identities=28% Similarity=0.430 Sum_probs=193.3
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.+.|++++.||+|+||.||++.+..+++.||+|++..... ......+.+|+.+++.++||||+++++++......|+|
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 98 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 98 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC--STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 4579999999999999999999999999999999976532 23457788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||+++++|.+++.. ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.......
T Consensus 99 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 173 (303)
T 3a7i_A 99 MEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 173 (303)
T ss_dssp EECCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--
T ss_pred EEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccc--
Confidence 999999999999975 348999999999999999999999999999999999999999999999999985532110
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+..
T Consensus 174 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~ 228 (303)
T 3a7i_A 174 -------------------------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL 228 (303)
T ss_dssp -------------------------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred -------------------------cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHH
Confidence 1123457999999999999999999999999999999999999999998888888
Q ss_pred HHHHcCCC-CCCCCC
Q 002356 908 ANILHKDL-KFPSST 921 (931)
Q Consensus 908 ~~I~~~~~-~~p~~~ 921 (931)
..+.++.. .++...
T Consensus 229 ~~~~~~~~~~~~~~~ 243 (303)
T 3a7i_A 229 FLIPKNNPPTLEGNY 243 (303)
T ss_dssp HHHHHSCCCCCCSSC
T ss_pred HHhhcCCCCCCcccc
Confidence 87776543 344333
No 163
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.1e-34 Score=320.41 Aligned_cols=227 Identities=24% Similarity=0.366 Sum_probs=190.1
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEE--EEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCC
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYF--AMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 742 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~--AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 742 (931)
+..++|++.+.||+|+||.||++.+..++..+ |+|.+... ........+.+|+.+++.+ +||||+++++++...+
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 99 (327)
T 1fvr_A 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 99 (327)
T ss_dssp CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT
T ss_pred ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc--cchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC
Confidence 55679999999999999999999999888865 99988653 2334456788999999999 8999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q 002356 743 HVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g 808 (931)
.+|+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY 179 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCC
Confidence 9999999999999999997642 23589999999999999999999999999999999999999999
Q ss_pred cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHH
Q 002356 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (931)
Q Consensus 809 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil 888 (931)
.+||+|||++..... ........+++.|+|||++.+..++.++|||||||++
T Consensus 180 ~~kL~Dfg~~~~~~~----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 231 (327)
T 1fvr_A 180 VAKIADFGLSRGQEV----------------------------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 231 (327)
T ss_dssp CEEECCTTCEESSCE----------------------------ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHH
T ss_pred eEEEcccCcCccccc----------------------------cccccCCCCCccccChhhhccccCCchhcchHHHHHH
Confidence 999999999853210 0111234578899999999888889999999999999
Q ss_pred HHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCc
Q 002356 889 YEMLY-GYTPFRGKTRQKTFANILHKD-LKFPSSTP 922 (931)
Q Consensus 889 ~ell~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~~ 922 (931)
|+|++ |..||.+.+..+++..+..+. +..|...+
T Consensus 232 ~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (327)
T 1fvr_A 232 WEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCD 267 (327)
T ss_dssp HHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBC
T ss_pred HHHHcCCCCCCCCCcHHHHHHHhhcCCCCCCCCCCC
Confidence 99998 999999999999998887763 44554433
No 164
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.4e-34 Score=336.75 Aligned_cols=233 Identities=24% Similarity=0.357 Sum_probs=193.0
Q ss_pred cccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (931)
.+.+..++|++.+.||+|+||.||++.+.. +..||+|.++.... ....+.+|+.+|+.++||||+++++++.. .
T Consensus 178 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~ 251 (452)
T 1fmk_A 178 AWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 251 (452)
T ss_dssp CSBCCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred ccccChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C
Confidence 455778899999999999999999999864 46799999976432 24578899999999999999999998866 6
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
..|+||||+.+|+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 252 ~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 331 (452)
T 1fmk_A 252 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331 (452)
T ss_dssp SCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred ceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecC
Confidence 78999999999999999975434558999999999999999999999999999999999999999999999999996542
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~ 901 (931)
... ........+++.|+|||++....++.++|||||||+||+|++ |..||.+.
T Consensus 332 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~ 385 (452)
T 1fmk_A 332 DNE--------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385 (452)
T ss_dssp -------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred CCc--------------------------eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC
Confidence 110 011123457889999999998899999999999999999999 99999999
Q ss_pred CHHHHHHHHHcC-CCCCCCCCcCChhh
Q 002356 902 TRQKTFANILHK-DLKFPSSTPRSKEQ 927 (931)
Q Consensus 902 ~~~~~~~~I~~~-~~~~p~~~~~~~~~ 927 (931)
+..+++..+.++ .+..|..++.....
T Consensus 386 ~~~~~~~~i~~~~~~~~~~~~~~~l~~ 412 (452)
T 1fmk_A 386 VNREVLDQVERGYRMPCPPECPESLHD 412 (452)
T ss_dssp CHHHHHHHHHTTCCCCCCTTSCHHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 999999998876 35666665544433
No 165
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.7e-34 Score=310.84 Aligned_cols=219 Identities=27% Similarity=0.444 Sum_probs=184.4
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++.+.||+|+||.||++.+..+++.||+|++..... ......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC--TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc--hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 3579999999999999999999999999999999875432 23456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||+++++|.+++... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.......
T Consensus 84 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-- 159 (276)
T 2yex_A 84 LEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-- 159 (276)
T ss_dssp EECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETT--
T ss_pred EEecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCc--
Confidence 9999999999998754 349999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCCHH-H
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQ-K 905 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~ell~G~~Pf~~~~~~-~ 905 (931)
.........||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.+.. .
T Consensus 160 -----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 216 (276)
T 2yex_A 160 -----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 216 (276)
T ss_dssp -----------------------EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH
T ss_pred -----------------------chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH
Confidence 0112234679999999999987665 67899999999999999999999875543 3
Q ss_pred HHHHHHcCCC
Q 002356 906 TFANILHKDL 915 (931)
Q Consensus 906 ~~~~I~~~~~ 915 (931)
.+..+..+..
T Consensus 217 ~~~~~~~~~~ 226 (276)
T 2yex_A 217 EYSDWKEKKT 226 (276)
T ss_dssp HHHHHHTTCT
T ss_pred HHHHhhhccc
Confidence 3444444433
No 166
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=5.1e-34 Score=322.39 Aligned_cols=215 Identities=25% Similarity=0.389 Sum_probs=184.6
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC-----C
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----T 742 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~ 742 (931)
.++|++++.||+|+||.||++.+..+++.||+|++... ........+.+|+.+|+.++||||+++++++... .
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT--TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc--cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 46899999999999999999999999999999998753 2345567788999999999999999999999754 4
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
..|+||||+. ++|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 104 ~~~iv~e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 104 DVYIVQDLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp CEEEEEECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred eEEEEEcccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 7899999995 6999999763 49999999999999999999999999999999999999999999999999996543
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
.... ........+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.
T Consensus 180 ~~~~------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 235 (364)
T 3qyz_A 180 PDHD------------------------HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 235 (364)
T ss_dssp GGGC------------------------BCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCC------------------------ccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCC
Confidence 1110 0111234679999999998754 45899999999999999999999999998
Q ss_pred CHHHHHHHHHc
Q 002356 902 TRQKTFANILH 912 (931)
Q Consensus 902 ~~~~~~~~I~~ 912 (931)
+..+.+..|..
T Consensus 236 ~~~~~~~~i~~ 246 (364)
T 3qyz_A 236 HYLDQLNHILG 246 (364)
T ss_dssp SGGGHHHHHHH
T ss_pred ChHHHHHHHHH
Confidence 88888877754
No 167
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.3e-34 Score=327.34 Aligned_cols=214 Identities=19% Similarity=0.215 Sum_probs=171.9
Q ss_pred ccCCCccccccccccCcEEEEEEEEecC-----CeEEEEEEeecccccChHH--------HHHHHHHHHHHHhcCCCCcc
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNK--------VHRACAEREILDMLDHPFVP 732 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~-----~~~~AvK~~~~~~~~~~~~--------~~~~~~E~~il~~l~hpnIv 732 (931)
+..++|++.+.||+|+||.||++.+..+ ++.||+|++.......... ......|+..++.++||||+
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv 111 (364)
T 3op5_A 32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP 111 (364)
T ss_dssp TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence 3456999999999999999999998764 5789999987642110011 11233455567777899999
Q ss_pred ceeEEEEeC----CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEe--c
Q 002356 733 ALYASFQTK----THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ--G 806 (931)
Q Consensus 733 ~l~~~~~~~----~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~--~ 806 (931)
++++++... .+.||||||| |++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .
T Consensus 112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSC
T ss_pred eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCC
Confidence 999998764 5689999999 99999999875 34599999999999999999999999999999999999999 8
Q ss_pred CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHH
Q 002356 807 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 886 (931)
Q Consensus 807 ~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGv 886 (931)
++.+||+|||+++........ ............||+.|+|||++.+..++.++|||||||
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~ 249 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVH--------------------KAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGY 249 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCC--------------------CCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred CCeEEEEECCcceecccCCcc--------------------cccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHH
Confidence 899999999999654321110 000112234567999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCC
Q 002356 887 LLYEMLYGYTPFRGK 901 (931)
Q Consensus 887 il~ell~G~~Pf~~~ 901 (931)
+||+|++|+.||.+.
T Consensus 250 ~l~el~~g~~Pf~~~ 264 (364)
T 3op5_A 250 CMIQWLTGHLPWEDN 264 (364)
T ss_dssp HHHHHHHSCCTTGGG
T ss_pred HHHHHHhCCCCcccc
Confidence 999999999999853
No 168
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=5.4e-34 Score=328.51 Aligned_cols=209 Identities=29% Similarity=0.462 Sum_probs=174.5
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe------C
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------K 741 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~ 741 (931)
..+|++.+.||+|+||.||++.+..+++.||||.+..... ...+|+++|+.++||||++++++|.. .
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~ 125 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDE 125 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcc
Confidence 4479999999999999999999999999999999865421 12369999999999999999998853 2
Q ss_pred CeEEEEEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC-CcEEEEeccCC
Q 002356 742 THVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLS 818 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~-g~vkL~DFG~a 818 (931)
.++++||||+. ++|..++.. .....+++..++.++.||+.||.|||++||+||||||+|||++.+ +.+||+|||++
T Consensus 126 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 126 VYLNLVLDYVP-ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEEEEECCC-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred eeEEeehhccc-ccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhh
Confidence 34789999995 467666543 223569999999999999999999999999999999999999965 57899999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~P 897 (931)
+..... ......+||+.|+|||++.+. .++.++|||||||+||+|++|++|
T Consensus 205 ~~~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~p 256 (420)
T 1j1b_A 205 KQLVRG----------------------------EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256 (420)
T ss_dssp EECCTT----------------------------CCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred hhcccC----------------------------CCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCC
Confidence 653211 112345789999999999765 789999999999999999999999
Q ss_pred CCCCCHHHHHHHHHc
Q 002356 898 FRGKTRQKTFANILH 912 (931)
Q Consensus 898 f~~~~~~~~~~~I~~ 912 (931)
|.+.+..+.+..|++
T Consensus 257 f~~~~~~~~l~~i~~ 271 (420)
T 1j1b_A 257 FPGDSGVDQLVEIIK 271 (420)
T ss_dssp SCCSSHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHH
Confidence 999988877777764
No 169
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1e-34 Score=315.05 Aligned_cols=227 Identities=24% Similarity=0.417 Sum_probs=185.5
Q ss_pred ccccccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE
Q 002356 660 LDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (931)
Q Consensus 660 ~~~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (931)
...++.+..++|++.+.||+|+||.||++.+ +++.||+|++... ...+.+.+|+.+++.++||||+++++++.
T Consensus 12 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 84 (278)
T 1byg_A 12 YRSGWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIV 84 (278)
T ss_dssp ---CCBCCGGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCC-----C--HHHHHTHHHHTTCCCTTBCCEEEEEC
T ss_pred hhccccCChhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecch-----hHHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence 3445667889999999999999999999987 5889999998754 24567889999999999999999999875
Q ss_pred e-CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCC
Q 002356 740 T-KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (931)
Q Consensus 740 ~-~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a 818 (931)
. .+.+|+||||+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~ 164 (278)
T 1byg_A 85 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164 (278)
T ss_dssp CC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-
T ss_pred cCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccc
Confidence 4 457899999999999999998653334889999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 897 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~P 897 (931)
...... .....+++.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus 165 ~~~~~~------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p 214 (278)
T 1byg_A 165 KEASST------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214 (278)
T ss_dssp -----------------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred cccccc------------------------------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCC
Confidence 543210 112357889999999998889999999999999999998 9999
Q ss_pred CCCCCHHHHHHHHHcC-CCCCCCCCcC
Q 002356 898 FRGKTRQKTFANILHK-DLKFPSSTPR 923 (931)
Q Consensus 898 f~~~~~~~~~~~I~~~-~~~~p~~~~~ 923 (931)
|...+..++...+.++ .+.+|...+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (278)
T 1byg_A 215 YPRIPLKDVVPRVEKGYKMDAPDGCPP 241 (278)
T ss_dssp CTTSCGGGHHHHHTTTCCCCCCTTCCH
T ss_pred CCCCCHHHHHHHHhcCCCCCCcccCCH
Confidence 9998888888888766 3455554443
No 170
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.9e-34 Score=332.13 Aligned_cols=220 Identities=32% Similarity=0.510 Sum_probs=175.6
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccC-----hHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----RNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~-----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (931)
.++|.+.+.||+|+||.||+|.+..+++.||+|++.+..... ......+.+|+.+|+.++||||+++++++.. .
T Consensus 134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~ 212 (419)
T 3i6u_A 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-E 212 (419)
T ss_dssp HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-S
T ss_pred hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-C
Confidence 468999999999999999999999999999999998653221 1223357789999999999999999999854 5
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC---cEEEEeccCCc
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSC 819 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g---~vkL~DFG~a~ 819 (931)
..|+|||||++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++.
T Consensus 213 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 213 DYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp EEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred ceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccce
Confidence 579999999999999988764 4599999999999999999999999999999999999997544 59999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC---CCCCChhhHHHHHHHHHHHHcCCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYT 896 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~ell~G~~ 896 (931)
..... ......+||+.|+|||++.+ ..++.++|||||||++|+|++|.+
T Consensus 291 ~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~ 342 (419)
T 3i6u_A 291 ILGET----------------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 342 (419)
T ss_dssp SCC---------------------------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSC
T ss_pred ecCCC----------------------------ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCC
Confidence 54211 11234679999999999864 567789999999999999999999
Q ss_pred CCCCCCH-HHHHHHHHcCCCCCC
Q 002356 897 PFRGKTR-QKTFANILHKDLKFP 918 (931)
Q Consensus 897 Pf~~~~~-~~~~~~I~~~~~~~p 918 (931)
||.+... ..+...+..+.+.++
T Consensus 343 pf~~~~~~~~~~~~i~~~~~~~~ 365 (419)
T 3i6u_A 343 PFSEHRTQVSLKDQITSGKYNFI 365 (419)
T ss_dssp SSCCCSSSCCHHHHHHTTCCCCC
T ss_pred CCCCCcchHHHHHHHhcCCCCCC
Confidence 9986433 345556666665554
No 171
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=6.5e-34 Score=329.10 Aligned_cols=218 Identities=23% Similarity=0.334 Sum_probs=170.2
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC-----C
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----T 742 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~ 742 (931)
.++|++.+.||+|+||.||+|.+..+++.||||++.+. ........++.+|+.+|+.++||||+++++++... .
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM-FEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECST-TTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCch-hcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 57899999999999999999999999999999999764 33455667889999999999999999999999765 6
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
.+|+||||+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 104 ELYIVLEIA-DSDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp CEEEEEECC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred eEEEEEecC-CcCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 799999999 56999999764 459999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhh-cCCCCCChhhHHHHHHHHHHHHcC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-AGAGHTSAVDWWALGILLYEMLYG 894 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~-~~~~~~~~~DiwSlGvil~ell~G 894 (931)
.............. ...+ .............+||+.|+|||++ ....++.++|||||||++|+|++|
T Consensus 181 ~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g 248 (432)
T 3n9x_A 181 SEKDTNIVNDLEEN-EEPG----PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNM 248 (432)
T ss_dssp -----------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccccc-cccc----ccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhc
Confidence 22111000000000 0000 0000000123567899999999986 556689999999999999999983
No 172
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=8e-34 Score=316.10 Aligned_cols=213 Identities=23% Similarity=0.396 Sum_probs=185.6
Q ss_pred ccCCCccccccccccCcEEEEEEEE-ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCC------CccceeEEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVEL-CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP------FVPALYASF 738 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~-~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hp------nIv~l~~~~ 738 (931)
+..++|++.+.||+|+||.||++.+ ..+++.||+|++... ......+.+|+.+++.++|+ +|+++++++
T Consensus 11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~ 86 (339)
T 1z57_A 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF 86 (339)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE
T ss_pred CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccc
Confidence 3457999999999999999999998 568899999998653 34456788899999888655 599999999
Q ss_pred EeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec------------
Q 002356 739 QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG------------ 806 (931)
Q Consensus 739 ~~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~------------ 806 (931)
...+.+|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 87 ~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 87 EHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----
T ss_pred ccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccc
Confidence 9999999999999 999999998876556999999999999999999999999999999999999987
Q ss_pred -------CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChh
Q 002356 807 -------NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAV 879 (931)
Q Consensus 807 -------~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~ 879 (931)
++.+||+|||++..... ......||+.|+|||++.+..++.++
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~ 215 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDE------------------------------HHSTLVSTRHYRAPEVILALGWSQPC 215 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTS------------------------------CCCSSCSCGGGCCHHHHTTSCCCTHH
T ss_pred cccccccCCCceEeeCcccccCcc------------------------------ccccccCCccccChHHhhCCCCCcch
Confidence 66899999999854221 12245799999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC
Q 002356 880 DWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 880 DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~ 913 (931)
|||||||++|+|++|..||.+.+..+....+.+.
T Consensus 216 Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 249 (339)
T 1z57_A 216 DVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249 (339)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 9999999999999999999998888877766543
No 173
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.3e-35 Score=337.22 Aligned_cols=205 Identities=19% Similarity=0.159 Sum_probs=167.3
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHH---HHhcCCCCcccee-------EE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI---LDMLDHPFVPALY-------AS 737 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~i---l~~l~hpnIv~l~-------~~ 737 (931)
.++|++.+.||+|+||.||+|.+..+++.||||++.+...........+.+|+.+ |+.++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 5689999999999999999999999999999999987655555667888999954 5555899999998 77
Q ss_pred EEeCC-----------------eEEEEEeccCCCCHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q 002356 738 FQTKT-----------------HVCLITDYCPGGELFLLLDRQPT-----KVLKEDAVRFYAAEVVVALEYLHCQGIIYR 795 (931)
Q Consensus 738 ~~~~~-----------------~~~lVmE~~~ggsL~~~l~~~~~-----~~l~~~~~~~i~~qil~aL~~LH~~gIiHr 795 (931)
+...+ ..|+||||+ +|+|.+++..... ..+++..++.++.||+.||.|||++||+||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr 230 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 230 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 76553 389999999 7899999986421 112347888899999999999999999999
Q ss_pred CCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC--
Q 002356 796 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-- 873 (931)
Q Consensus 796 DIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-- 873 (931)
||||+|||++.++.+||+|||+++... .......| +.|+|||++.+.
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~------------------------------~~~~~~~g-~~y~aPE~~~~~~~ 279 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDG------------------------------ARVVSSVS-RGFEPPELEARRAT 279 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETT------------------------------CEEECCCC-TTCCCHHHHHHHTS
T ss_pred CCCHHHEEEcCCCCEEEEechhheecC------------------------------CcccCCCC-cCccChhhhccccc
Confidence 999999999999999999999985321 11224567 999999999887
Q ss_pred ---------CCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 874 ---------GHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 874 ---------~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
.++.++|||||||+||+|++|+.||.+.+..
T Consensus 280 ~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~ 319 (377)
T 3byv_A 280 ISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAAL 319 (377)
T ss_dssp THHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred ccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccc
Confidence 8999999999999999999999999875543
No 174
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-34 Score=330.31 Aligned_cols=220 Identities=27% Similarity=0.431 Sum_probs=184.9
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC--e
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--H 743 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~ 743 (931)
...++|.+.+.||+|+||.||++.+..+++.||+|++..... ......+.+|+.+|+.++||||+++++++.... .
T Consensus 6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 83 (396)
T 4eut_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRH 83 (396)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCC
T ss_pred CCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCe
Confidence 345789999999999999999999999999999999976432 223566789999999999999999999998655 7
Q ss_pred EEEEEeccCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEE----ecCCcEEEEeccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLS 818 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll----~~~g~vkL~DFG~a 818 (931)
.|+|||||.|++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp EEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred eEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 899999999999999997642 2339999999999999999999999999999999999999 66778999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC--------CCCCChhhHHHHHHHHHH
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--------AGHTSAVDWWALGILLYE 890 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~--------~~~~~~~DiwSlGvil~e 890 (931)
...... .......||+.|+|||++.+ ..++.++|||||||++|+
T Consensus 164 ~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~e 215 (396)
T 4eut_A 164 RELEDD----------------------------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH 215 (396)
T ss_dssp EECCCG----------------------------GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHH
T ss_pred eEccCC----------------------------CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHH
Confidence 653211 11234579999999999865 456779999999999999
Q ss_pred HHcCCCCCCC----CCHHHHHHHHHcCCC
Q 002356 891 MLYGYTPFRG----KTRQKTFANILHKDL 915 (931)
Q Consensus 891 ll~G~~Pf~~----~~~~~~~~~I~~~~~ 915 (931)
|++|+.||.+ ....+++.+++.+..
T Consensus 216 l~tg~~Pf~~~~~~~~~~~~~~~~~~~~p 244 (396)
T 4eut_A 216 AATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (396)
T ss_dssp HHHSSCSEECTTCTTTCHHHHHHHHHSCC
T ss_pred HHHCCCCCCCCCcccchHHHHHHHhcCCC
Confidence 9999999974 344677777777653
No 175
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.6e-34 Score=323.79 Aligned_cols=223 Identities=26% Similarity=0.473 Sum_probs=194.2
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChH--------------HHHHHHHHHHHHHhcCCCCc
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN--------------KVHRACAEREILDMLDHPFV 731 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~--------------~~~~~~~E~~il~~l~hpnI 731 (931)
...++|++.+.||+|+||.||++.+ +++.||+|.+......... ....+.+|+.+++.++||||
T Consensus 28 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 105 (348)
T 2pml_X 28 KYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC 105 (348)
T ss_dssp EEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB
T ss_pred cccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc
Confidence 4567999999999999999999999 8999999999765332211 12778899999999999999
Q ss_pred cceeEEEEeCCeEEEEEeccCCCCHHHH------HhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEE
Q 002356 732 PALYASFQTKTHVCLITDYCPGGELFLL------LDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLL 804 (931)
Q Consensus 732 v~l~~~~~~~~~~~lVmE~~~ggsL~~~------l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~gIiHrDIKP~NIll 804 (931)
+++++++...+..|+||||+++++|.++ +.......+++..++.++.||+.||.|||+ +||+||||||+||++
T Consensus 106 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 106 LTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM 185 (348)
T ss_dssp CCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEE
T ss_pred ceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEE
Confidence 9999999999999999999999999998 655435679999999999999999999999 999999999999999
Q ss_pred ecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCC-hhhHH
Q 002356 805 QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTS-AVDWW 882 (931)
Q Consensus 805 ~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~-~~Diw 882 (931)
+.++.+||+|||++...... ......||+.|+|||++.+. .++. ++|||
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~ 236 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK-----------------------------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIW 236 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT-----------------------------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHH
T ss_pred cCCCcEEEeccccccccccc-----------------------------cccCCCCCcCccCchhhcCCCCCCcchhhHH
Confidence 99999999999998543210 12345699999999999877 5666 99999
Q ss_pred HHHHHHHHHHcCCCCCCCCCH-HHHHHHHHcCCCCCCC
Q 002356 883 ALGILLYEMLYGYTPFRGKTR-QKTFANILHKDLKFPS 919 (931)
Q Consensus 883 SlGvil~ell~G~~Pf~~~~~-~~~~~~I~~~~~~~p~ 919 (931)
||||++|+|++|..||.+.+. .+++..+..+.+.+|.
T Consensus 237 slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~ 274 (348)
T 2pml_X 237 SLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPL 274 (348)
T ss_dssp HHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCC
T ss_pred HHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCcc
Confidence 999999999999999998777 8899999999888884
No 176
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=6.6e-34 Score=314.16 Aligned_cols=233 Identities=24% Similarity=0.320 Sum_probs=186.2
Q ss_pred cccCCCccccccccccCcEEEEEEEEec---CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~---~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
.+..++|.+.+.||+|+||.||++.+.. ++..||+|.+..... .......+.+|+.+++.++||||+++++++...
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC-CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc-chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 4567899999999999999999998865 566899999876432 345567789999999999999999999998765
Q ss_pred C-----eEEEEEeccCCCCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEE
Q 002356 742 T-----HVCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 812 (931)
Q Consensus 742 ~-----~~~lVmE~~~ggsL~~~l~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL 812 (931)
+ ..|+||||+.+++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEE
T ss_pred cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEE
Confidence 4 459999999999999998532 2356999999999999999999999999999999999999999999999
Q ss_pred EeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHH
Q 002356 813 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 892 (931)
Q Consensus 813 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 892 (931)
+|||++........ ........+++.|+|||.+.+..++.++|||||||++|+|+
T Consensus 189 ~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 243 (313)
T 3brb_A 189 ADFGLSKKIYSGDY-------------------------YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIA 243 (313)
T ss_dssp CSCSCC-----------------------------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHH
T ss_pred eecCcceecccccc-------------------------cCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHH
Confidence 99999865421100 01122345788999999999999999999999999999999
Q ss_pred c-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCcC
Q 002356 893 Y-GYTPFRGKTRQKTFANILHKD-LKFPSSTPR 923 (931)
Q Consensus 893 ~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~~~ 923 (931)
+ |.+||.+.+..+++..+..+. ..+|...+.
T Consensus 244 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (313)
T 3brb_A 244 TRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLD 276 (313)
T ss_dssp TTSCCSSTTCCGGGHHHHHHTTCCCCCBTTCCH
T ss_pred hcCCCCCccCCHHHHHHHHHcCCCCCCCccccH
Confidence 9 999999998888888888764 455555443
No 177
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=5.5e-34 Score=309.71 Aligned_cols=228 Identities=24% Similarity=0.318 Sum_probs=188.9
Q ss_pred cccCCCccccccccccCcEEEEEEEEec---CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~---~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
.+..++|.+.+.||+|+||.||++.+.. ++..||+|.+.+.. .......+.+|+.+++.++||||+++++++..
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~- 84 (281)
T 3cc6_A 8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE- 84 (281)
T ss_dssp SCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-
T ss_pred eecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-
Confidence 4567899999999999999999999754 34579999987642 34556788999999999999999999999865
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
+..|+||||+.+++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus 85 ~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 85 EPTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI 163 (281)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred CCCEEEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCccc
Confidence 45689999999999999997643 45899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~ 900 (931)
.... ........|++.|+|||++.+..++.++|||||||++|+|++ |+.||..
T Consensus 164 ~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~ 217 (281)
T 3cc6_A 164 EDED--------------------------YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 217 (281)
T ss_dssp -----------------------------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred cccc--------------------------ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCccc
Confidence 2110 011223457889999999998889999999999999999998 9999998
Q ss_pred CCHHHHHHHHHcCC-CCCCCCCc
Q 002356 901 KTRQKTFANILHKD-LKFPSSTP 922 (931)
Q Consensus 901 ~~~~~~~~~I~~~~-~~~p~~~~ 922 (931)
.+..+....+..+. +..|...+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~ 240 (281)
T 3cc6_A 218 LENKDVIGVLEKGDRLPKPDLCP 240 (281)
T ss_dssp SCGGGHHHHHHHTCCCCCCTTCC
T ss_pred CChHHHHHHHhcCCCCCCCCCCC
Confidence 88877887777653 45554443
No 178
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.3e-33 Score=312.09 Aligned_cols=196 Identities=24% Similarity=0.387 Sum_probs=172.9
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEEEEe--CC
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQT--KT 742 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~--~~ 742 (931)
...++|++.+.||+|+||.||++.+..+++.||+|++... ....+.+|+.+|+.+. ||||+++++++.. ..
T Consensus 33 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~ 106 (330)
T 3nsz_A 33 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSR 106 (330)
T ss_dssp EEGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTC
T ss_pred cCCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCC
Confidence 4567899999999999999999999999999999998753 2356889999999996 9999999999987 67
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-cEEEEeccCCccc
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLT 821 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g-~vkL~DFG~a~~~ 821 (931)
..++||||+.+++|.+++.. +++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++...
T Consensus 107 ~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~ 181 (330)
T 3nsz_A 107 TPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 181 (330)
T ss_dssp CEEEEEECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred ceEEEEeccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence 89999999999999998854 88999999999999999999999999999999999999777 8999999999643
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..
T Consensus 182 ~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~ 233 (330)
T 3nsz_A 182 HPG----------------------------QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 233 (330)
T ss_dssp CTT----------------------------CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred CCC----------------------------CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 211 11234578999999999977 6689999999999999999999999953
No 179
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.3e-34 Score=315.07 Aligned_cols=201 Identities=27% Similarity=0.392 Sum_probs=169.1
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~l 746 (931)
.++|++++.||+|+||.||+|.+..+++.||||++..... ..........|+..+..+ +||||+++++++...+.+|+
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR-GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC-SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc-ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 4689999999999999999999999999999999866433 233344455565555544 99999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 135 v~e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~-- 210 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-- 210 (311)
T ss_dssp EEECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred EEecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccC--
Confidence 99999 789999887653 45999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+
T Consensus 211 --------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~ 257 (311)
T 3p1a_A 211 --------------------------GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHG 257 (311)
T ss_dssp ------------------------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred --------------------------CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 11234469999999999876 689999999999999999999776654
No 180
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.8e-34 Score=317.05 Aligned_cols=233 Identities=23% Similarity=0.353 Sum_probs=190.1
Q ss_pred cccccCCCccccccccccCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeE
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 736 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~-----~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~ 736 (931)
.+.+..++|++.+.||+|+||.||++.+. .+++.||+|++.... .......+.+|+.+++.+ +||||+++++
T Consensus 21 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence 34566789999999999999999999864 467899999997642 344556788999999999 7999999999
Q ss_pred EEEeC-CeEEEEEeccCCCCHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCc
Q 002356 737 SFQTK-THVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (931)
Q Consensus 737 ~~~~~-~~~~lVmE~~~ggsL~~~l~~~~~--------------~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~N 801 (931)
++... ..+|+||||+++++|.+++..... ..+++..++.++.||+.||.|||++||+||||||+|
T Consensus 99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~N 178 (316)
T 2xir_A 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 178 (316)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred EEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccce
Confidence 98765 458999999999999999986532 228999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhH
Q 002356 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (931)
Q Consensus 802 Ill~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~Di 881 (931)
|+++.++.+||+|||++........ ........||+.|+|||++.+..++.++||
T Consensus 179 il~~~~~~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di 233 (316)
T 2xir_A 179 ILLSEKNVVKICDFGLARDIYKDPD-------------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDV 233 (316)
T ss_dssp EEECGGGCEEECCCGGGSCTTTCTT-------------------------SEEETTEEECGGGCCHHHHHHCCCCHHHHH
T ss_pred EEECCCCCEEECCCccccccccCcc-------------------------ceeccCCCcceeecCchhhccccccchhHH
Confidence 9999999999999999865431110 112234568899999999999999999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCCH-HHHHHHHHcCC-CCCCCCCc
Q 002356 882 WALGILLYEMLY-GYTPFRGKTR-QKTFANILHKD-LKFPSSTP 922 (931)
Q Consensus 882 wSlGvil~ell~-G~~Pf~~~~~-~~~~~~I~~~~-~~~p~~~~ 922 (931)
|||||++|+|++ |..||.+... ..+...+..+. +.+|...+
T Consensus 234 ~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (316)
T 2xir_A 234 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT 277 (316)
T ss_dssp HHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCC
T ss_pred HHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCC
Confidence 999999999998 9999987654 34445555543 45554433
No 181
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=9.6e-34 Score=308.83 Aligned_cols=224 Identities=26% Similarity=0.411 Sum_probs=171.8
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+..++|++++.||+|+||.||++.+..+++.||+|.+..... .......+..+...++.++||||+++++++...+..
T Consensus 3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~ 81 (290)
T 3fme_A 3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN-SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV 81 (290)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C-HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSE
T ss_pred cccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC-cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCE
Confidence 3567899999999999999999999999999999999876422 222333344555557888999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 745 CLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~-gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
|+||||++ ++|.+++.. .....+++..++.++.||+.||.|||++ ||+||||||+||+++.++.+||+|||++...
T Consensus 82 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 82 WICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred EEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 99999995 588887754 1235699999999999999999999998 9999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhh----cCCCCCChhhHHHHHHHHHHHHcCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII----AGAGHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~----~~~~~~~~~DiwSlGvil~ell~G~~P 897 (931)
... .......||+.|+|||++ .+..++.++|||||||++|+|++|+.|
T Consensus 161 ~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 212 (290)
T 3fme_A 161 VDD----------------------------VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 212 (290)
T ss_dssp -------------------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCS
T ss_pred ccc----------------------------ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 211 111234699999999996 556788899999999999999999999
Q ss_pred CCC-CCHHHHHHHHHcC-CCCCC
Q 002356 898 FRG-KTRQKTFANILHK-DLKFP 918 (931)
Q Consensus 898 f~~-~~~~~~~~~I~~~-~~~~p 918 (931)
|.. ......+..+... ...+|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~ 235 (290)
T 3fme_A 213 YDSWGTPFQQLKQVVEEPSPQLP 235 (290)
T ss_dssp SCCCSCHHHHHHHHHHSCCCCCC
T ss_pred ccccCchHHHHHHHhccCCCCcc
Confidence 986 4444555555444 33433
No 182
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=7e-34 Score=322.20 Aligned_cols=209 Identities=26% Similarity=0.433 Sum_probs=181.6
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE---
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV--- 744 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~--- 744 (931)
.++|.+.+.||+|+||.||+|.+..+++.||+|++.... ........+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc-cchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 479999999999999999999999999999999997643 3445567888999999999999999999999876654
Q ss_pred ---EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 745 ---CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 745 ---~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
|+||||+. ++|.+++.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred eeEEEEEcccc-ccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 99999995 788887743 3999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.. ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+
T Consensus 195 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 244 (371)
T 4exu_A 195 DA------------------------------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 244 (371)
T ss_dssp -----------------------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cc------------------------------CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 21 1224578999999999987 6789999999999999999999999999
Q ss_pred CCHHHHHHHHHc
Q 002356 901 KTRQKTFANILH 912 (931)
Q Consensus 901 ~~~~~~~~~I~~ 912 (931)
.+..+.+.++.+
T Consensus 245 ~~~~~~~~~i~~ 256 (371)
T 4exu_A 245 KDYLDQLTQILK 256 (371)
T ss_dssp SSHHHHHHHHHH
T ss_pred CChHHHHHHHHH
Confidence 998888888765
No 183
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=7.3e-34 Score=310.29 Aligned_cols=223 Identities=22% Similarity=0.331 Sum_probs=175.1
Q ss_pred ccccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
....+..++|++.+.||+|+||.||++.+. ..+|+|+++... ........+.+|+.+|+.++||||++++++. ..
T Consensus 17 ~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~ 91 (289)
T 3og7_A 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TA 91 (289)
T ss_dssp -CCBCCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CS
T ss_pred CCCccCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccC-CCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cC
Confidence 344678899999999999999999999863 359999987643 3455667889999999999999999999954 55
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
...++||||+.+++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 92 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 92 PQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170 (289)
T ss_dssp SSCEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred CccEEEEEecCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccc
Confidence 6789999999999999999654 345999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc---CCCCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
.... .........||+.|+|||++. ...++.++|||||||++|+|++|+.||
T Consensus 171 ~~~~-------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~ 225 (289)
T 3og7_A 171 SRWS-------------------------GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225 (289)
T ss_dssp --------------------------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred cccc-------------------------ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCc
Confidence 2110 011123457999999999996 566788999999999999999999999
Q ss_pred CCCCH-HHHHHHHHcCCC
Q 002356 899 RGKTR-QKTFANILHKDL 915 (931)
Q Consensus 899 ~~~~~-~~~~~~I~~~~~ 915 (931)
.+.+. ..+...+..+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~ 243 (289)
T 3og7_A 226 SNINNRDQIIEMVGRGSL 243 (289)
T ss_dssp SSCCCHHHHHHHHHHTSC
T ss_pred cccchHHHHHHHhccccc
Confidence 87544 445555555544
No 184
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3.2e-34 Score=318.45 Aligned_cols=206 Identities=25% Similarity=0.341 Sum_probs=173.5
Q ss_pred ccccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
....+..++|++.+.||+|+||.||++.+ .++.||||++... .........|+.+|+.++||||+++++++...
T Consensus 17 ~n~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 90 (322)
T 3soc_A 17 ENLYFQSMPLQLLEVKARGRFGCVWKAQL--LNEYVAVKIFPIQ----DKQSWQNEYEVYSLPGMKHENILQFIGAEKRG 90 (322)
T ss_dssp CCEEETTEEEEEEEEEECSTTCEEEEEEE--TTEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEE
T ss_pred cccccchhhchhhheecccCceEEEEEEE--CCCEEEEEEeecC----chHHHHHHHHHHHHhcCCCCCchhhcceeccC
Confidence 34457788999999999999999999987 4799999998654 23334556688899999999999999999874
Q ss_pred C----eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC----------CCccCCCCCCcEEEecC
Q 002356 742 T----HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ----------GIIYRDLKPENVLLQGN 807 (931)
Q Consensus 742 ~----~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~----------gIiHrDIKP~NIll~~~ 807 (931)
. .+|+|||||++|+|.+++... .+++..++.++.||+.||.|||++ ||+||||||+|||++.+
T Consensus 91 ~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~ 167 (322)
T 3soc_A 91 TSVDVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNN 167 (322)
T ss_dssp CSSSEEEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTT
T ss_pred CCCCceEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCC
Confidence 3 479999999999999999874 389999999999999999999999 99999999999999999
Q ss_pred CcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-----CCCChhhHH
Q 002356 808 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWW 882 (931)
Q Consensus 808 g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-----~~~~~~Diw 882 (931)
+.+||+|||++........ ........||+.|+|||++.+. .++.++|||
T Consensus 168 ~~~kL~DFg~a~~~~~~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diw 222 (322)
T 3soc_A 168 LTACIADFGLALKFEAGKS-------------------------AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMY 222 (322)
T ss_dssp CCEEECCCTTCEEECTTSC-------------------------CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHH
T ss_pred CeEEEccCCcccccccccC-------------------------ccccccCccCccccCHhhcccccccCcCCCccchhH
Confidence 9999999999965431110 1122345799999999999863 345588999
Q ss_pred HHHHHHHHHHcCCCCCCCC
Q 002356 883 ALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 883 SlGvil~ell~G~~Pf~~~ 901 (931)
||||++|+|++|+.||.+.
T Consensus 223 slG~il~el~tg~~pf~~~ 241 (322)
T 3soc_A 223 AMGLVLWELASRCTAADGP 241 (322)
T ss_dssp HHHHHHHHHHTTBTTSSSC
T ss_pred HHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999753
No 185
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=8.6e-34 Score=308.19 Aligned_cols=220 Identities=20% Similarity=0.315 Sum_probs=182.1
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~l 746 (931)
.++|++.+.||+|+||.||++.+..+++.||+|.+..... .......+.+|+.++..+ +||||+++++++...+..|+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA-GSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT-TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc-ccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3579999999999999999999999999999999986533 334456788899999999 99999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC-----------------
Q 002356 747 ITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----------------- 807 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~----------------- 807 (931)
||||++|++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~ 168 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWAS 168 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-------------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccC
Confidence 999999999999997631 1458999999999999999999999999999999999999844
Q ss_pred --CcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHH
Q 002356 808 --GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWAL 884 (931)
Q Consensus 808 --g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSl 884 (931)
..+||+|||++..... .....||+.|+|||++.+. .++.++|||||
T Consensus 169 ~~~~~kl~Dfg~~~~~~~-------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~sl 217 (289)
T 1x8b_A 169 NKVMFKIGDLGHVTRISS-------------------------------PQVEEGDSRFLANEVLQENYTHLPKADIFAL 217 (289)
T ss_dssp -CCCEEECCCTTCEETTC-------------------------------SCCCCCCGGGCCHHHHTTCCTTHHHHHHHHH
T ss_pred CceEEEEcccccccccCC-------------------------------ccccCCCccccChhHhcCCCCCCchhhHHHH
Confidence 4799999999854321 1123599999999999876 55679999999
Q ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCc
Q 002356 885 GILLYEMLYGYTPFRGKTRQKTFANILHKDL-KFPSSTP 922 (931)
Q Consensus 885 Gvil~ell~G~~Pf~~~~~~~~~~~I~~~~~-~~p~~~~ 922 (931)
||++|+|++|.+||.... ....+.++.+ .+|...+
T Consensus 218 G~il~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 253 (289)
T 1x8b_A 218 ALTVVCAAGAEPLPRNGD---QWHEIRQGRLPRIPQVLS 253 (289)
T ss_dssp HHHHHHHTTCCCCCSSSH---HHHHHHTTCCCCCSSCCC
T ss_pred HHHHHHHhcCCCCCcchh---HHHHHHcCCCCCCCcccC
Confidence 999999999998876543 3455555544 4454433
No 186
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.1e-33 Score=308.58 Aligned_cols=219 Identities=28% Similarity=0.480 Sum_probs=191.0
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++.+.||+|+||.||+|.+..+++.||+|++.+... .......+.+|+.+++.++||||+++++++......|+|
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGB-SSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEeccccc-chHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 4689999999999999999999999999999999976533 233456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC---CcEEEEeccCCcccCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~---g~vkL~DFG~a~~~~~~ 824 (931)
|||+.+++|.+++... ..+++..++.++.||+.||.|||++||+|+||||+||+++.+ +.+||+|||++......
T Consensus 100 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~ 177 (287)
T 2wei_A 100 GELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (287)
T ss_dssp ECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred EEccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence 9999999999988764 349999999999999999999999999999999999999754 46999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
.......||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..
T Consensus 178 ----------------------------~~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 228 (287)
T 2wei_A 178 ----------------------------TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEY 228 (287)
T ss_dssp ----------------------------SSCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ----------------------------CccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHH
Confidence 111234689999999998764 889999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCC
Q 002356 905 KTFANILHKDLKFP 918 (931)
Q Consensus 905 ~~~~~I~~~~~~~p 918 (931)
++...+..+.+.++
T Consensus 229 ~~~~~~~~~~~~~~ 242 (287)
T 2wei_A 229 DILKRVETGKYAFD 242 (287)
T ss_dssp HHHHHHHHCCCCCC
T ss_pred HHHHHHHcCCCCCC
Confidence 99999998876554
No 187
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.5e-34 Score=312.50 Aligned_cols=230 Identities=24% Similarity=0.348 Sum_probs=183.0
Q ss_pred cccCCCccccccccccCcEEEEEEEEec-CC--eEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCG-SG--QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~-~~--~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
.+..++|++.+.||+|+||.||++.+.. ++ ..||+|++.............+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 93 (291)
T 1u46_A 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP 93 (291)
T ss_dssp ECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred ccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC
Confidence 4567799999999999999999998753 33 36999998876544556678899999999999999999999998876
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
. .++||||+.+++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++...
T Consensus 94 ~-~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 94 P-MKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp S-CEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred C-ceeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccc
Confidence 5 889999999999999997642 34899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~ 900 (931)
..... .........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 172 ~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 227 (291)
T 1u46_A 172 PQNDD------------------------HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 227 (291)
T ss_dssp CC-CC------------------------EEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccccc------------------------chhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 31110 0011234467889999999988888999999999999999999 9999999
Q ss_pred CCHHHHHHHHHcCCCCCCCC
Q 002356 901 KTRQKTFANILHKDLKFPSS 920 (931)
Q Consensus 901 ~~~~~~~~~I~~~~~~~p~~ 920 (931)
.+..+++..+......+|..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~ 247 (291)
T 1u46_A 228 LNGSQILHKIDKEGERLPRP 247 (291)
T ss_dssp CCHHHHHHHHHTSCCCCCCC
T ss_pred CCHHHHHHHHHccCCCCCCC
Confidence 99999999998776554443
No 188
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=5.6e-34 Score=312.76 Aligned_cols=218 Identities=27% Similarity=0.466 Sum_probs=184.2
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
..++|++++.||+|+||.||++.+..+++.||+|++... .......+.+|+.+++.++||||+++++++...+..|+
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 93 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWI 93 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC---CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEE
Confidence 356899999999999999999999999999999998654 23345678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
||||+++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 94 v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~---- 168 (302)
T 2j7t_A 94 MIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL---- 168 (302)
T ss_dssp EEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHH----
T ss_pred EEEeCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccc----
Confidence 999999999999987532 449999999999999999999999999999999999999999999999999874211
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhh-----cCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-----AGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~-----~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
..........||+.|+|||++ ....++.++|||||||++|+|++|..||...
T Consensus 169 -----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 225 (302)
T 2j7t_A 169 -----------------------KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 225 (302)
T ss_dssp -----------------------HHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred -----------------------ccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccC
Confidence 000112345799999999998 3667889999999999999999999999999
Q ss_pred CHHHHHHHHHcCCC
Q 002356 902 TRQKTFANILHKDL 915 (931)
Q Consensus 902 ~~~~~~~~I~~~~~ 915 (931)
+..+.+..+..+..
T Consensus 226 ~~~~~~~~~~~~~~ 239 (302)
T 2j7t_A 226 NPMRVLLKIAKSDP 239 (302)
T ss_dssp CHHHHHHHHHHSCC
T ss_pred CHHHHHHHHhccCC
Confidence 88888888877653
No 189
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.5e-34 Score=341.36 Aligned_cols=235 Identities=22% Similarity=0.341 Sum_probs=192.0
Q ss_pred ccCCCccccc-cccccCcEEEEEEEEec--CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC
Q 002356 666 INLQHFRPIK-PLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (931)
Q Consensus 666 ~~~~~y~i~~-~LG~G~~g~Vy~~~~~~--~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (931)
+..+.|.+.. .||+|+||.||++.+.. ++..||||+++... .......+.+|+.+|+.++||||+++++++.. +
T Consensus 332 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~ 408 (613)
T 2ozo_A 332 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E 408 (613)
T ss_dssp CCTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC--SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-S
T ss_pred ccccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-C
Confidence 4445566666 79999999999998763 56789999997652 33456788999999999999999999999876 5
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
.+|+|||||.+|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 409 ~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 409 ALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487 (613)
T ss_dssp SEEEEEECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred CeEEEEEeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence 689999999999999999754 3459999999999999999999999999999999999999999999999999996543
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~ 901 (931)
..... ........+++.|+|||++....++.++|||||||+||||++ |+.||.+.
T Consensus 488 ~~~~~------------------------~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~ 543 (613)
T 2ozo_A 488 ADDSY------------------------YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 543 (613)
T ss_dssp --------------------------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred CCCce------------------------eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 11100 011123346789999999998899999999999999999998 99999999
Q ss_pred CHHHHHHHHHcCC-CCCCCCCcCChhhh
Q 002356 902 TRQKTFANILHKD-LKFPSSTPRSKEQI 928 (931)
Q Consensus 902 ~~~~~~~~I~~~~-~~~p~~~~~~~~~~ 928 (931)
+..+++..|.++. +.+|..++.....+
T Consensus 544 ~~~~~~~~i~~~~~~~~p~~~~~~l~~l 571 (613)
T 2ozo_A 544 KGPEVMAFIEQGKRMECPPECPPELYAL 571 (613)
T ss_dssp CSHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCcCCHHHHHH
Confidence 9999999998875 57777766554443
No 190
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=3.5e-34 Score=340.09 Aligned_cols=233 Identities=24% Similarity=0.357 Sum_probs=196.4
Q ss_pred cccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (931)
.+.+..++|++.+.||+|+||.||++.+.. +..||||+++.... ....+.+|+.+|+.++||||+++++++.. .
T Consensus 261 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~ 334 (535)
T 2h8h_A 261 AWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 334 (535)
T ss_dssp CSBCCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred ceecchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEee-c
Confidence 456778899999999999999999999864 46799999976532 24578899999999999999999998866 6
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
.+|||||||.+|+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 335 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 335 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp SCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred cceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 78999999999999999975433558999999999999999999999999999999999999999999999999996542
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~ 901 (931)
.. .........+++.|+|||++....++.++|||||||+||+|++ |..||.+.
T Consensus 415 ~~--------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~ 468 (535)
T 2h8h_A 415 DN--------------------------EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 468 (535)
T ss_dssp CH--------------------------HHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC
T ss_pred CC--------------------------ceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 10 0011123457889999999998889999999999999999999 99999999
Q ss_pred CHHHHHHHHHcC-CCCCCCCCcCChhh
Q 002356 902 TRQKTFANILHK-DLKFPSSTPRSKEQ 927 (931)
Q Consensus 902 ~~~~~~~~I~~~-~~~~p~~~~~~~~~ 927 (931)
+..+++..+.++ .+..|..++.....
T Consensus 469 ~~~~~~~~i~~~~~~~~~~~~~~~l~~ 495 (535)
T 2h8h_A 469 VNREVLDQVERGYRMPCPPECPESLHD 495 (535)
T ss_dssp CHHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 999999998876 34666665544433
No 191
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=4.4e-34 Score=316.92 Aligned_cols=208 Identities=25% Similarity=0.286 Sum_probs=179.6
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
...++|++.+.||+|+||.||++.+ .+++.||+|.+... .......+.+|+.+++.++||||+++++++...+..|
T Consensus 36 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (321)
T 2qkw_B 36 EATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPE---SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMI 111 (321)
T ss_dssp CCCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSC---CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCE
T ss_pred HHHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEeccc---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEE
Confidence 3467999999999999999999996 46889999988654 2345677889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 746 LITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 112 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 191 (321)
T 2qkw_B 112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTE 191 (321)
T ss_dssp EEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSS
T ss_pred EEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 9999999999999987542 23589999999999999999999999999999999999999999999999999864321
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
.. .........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+..
T Consensus 192 ~~-------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~ 245 (321)
T 2qkw_B 192 LD-------------------------QTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL 245 (321)
T ss_dssp SS-------------------------CCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSS
T ss_pred cc-------------------------ccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccC
Confidence 10 0112234569999999999988889999999999999999999999997643
No 192
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=310.33 Aligned_cols=215 Identities=29% Similarity=0.456 Sum_probs=181.8
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
...++|++.+.||+|+||.||++.+..+++.||+|.+.... ....+.+|+.+++.++||||+++++++...+..|
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLW 100 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEE
Confidence 34578999999999999999999999999999999987542 2356788999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
+||||+.+++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++......
T Consensus 101 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~- 178 (314)
T 3com_A 101 IVMEYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT- 178 (314)
T ss_dssp EEEECCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTT-
T ss_pred EEeecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhh-
Confidence 999999999999999743 245999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||...+...
T Consensus 179 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~ 232 (314)
T 3com_A 179 --------------------------MAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR 232 (314)
T ss_dssp --------------------------BSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred --------------------------ccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 111234579999999999999889999999999999999999999999887776
Q ss_pred HHHHHHcC
Q 002356 906 TFANILHK 913 (931)
Q Consensus 906 ~~~~I~~~ 913 (931)
....+..+
T Consensus 233 ~~~~~~~~ 240 (314)
T 3com_A 233 AIFMIPTN 240 (314)
T ss_dssp HHHHHHHS
T ss_pred HHHHHhcC
Confidence 66665544
No 193
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.7e-33 Score=312.51 Aligned_cols=216 Identities=26% Similarity=0.435 Sum_probs=183.7
Q ss_pred cCCCccccccccccCcEEEEEEEEe-cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc---CCCCccceeEEEE---
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELC-GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQ--- 739 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~-~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~--- 739 (931)
..++|++.+.||+|+||.||++.+. .+++.||+|++...... ......+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT-TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccc-ccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 4578999999999999999999995 67899999998764321 11223455677776666 8999999999987
Q ss_pred --eCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccC
Q 002356 740 --TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (931)
Q Consensus 740 --~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~ 817 (931)
.....++||||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcc
Confidence 5678899999996 6999999876556699999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCC
Q 002356 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~P 897 (931)
+...... .......||+.|+|||++.+..++.++|||||||++|+|++|++|
T Consensus 167 ~~~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p 218 (326)
T 1blx_A 167 ARIYSFQ----------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218 (326)
T ss_dssp CCCCCGG----------------------------GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred cccccCC----------------------------CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCC
Confidence 8543210 112345789999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHc
Q 002356 898 FRGKTRQKTFANILH 912 (931)
Q Consensus 898 f~~~~~~~~~~~I~~ 912 (931)
|.+.+..+.+..|++
T Consensus 219 f~~~~~~~~~~~i~~ 233 (326)
T 1blx_A 219 FRGSSDVDQLGKILD 233 (326)
T ss_dssp CCCSSHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHH
Confidence 999998888888875
No 194
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=9.6e-34 Score=323.05 Aligned_cols=201 Identities=25% Similarity=0.405 Sum_probs=175.0
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC--------CCCccceeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD--------HPFVPALYASF 738 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~--------hpnIv~l~~~~ 738 (931)
..++|++.+.||+|+||.||+|.+..+++.||+|++... ......+.+|+.+|+.+. ||||++++++|
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~ 110 (397)
T 1wak_A 35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDF 110 (397)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEE
T ss_pred cCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecce
Confidence 357899999999999999999999999999999998753 345567889999999885 78899999998
Q ss_pred E----eCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCC-----
Q 002356 739 Q----TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNG----- 808 (931)
Q Consensus 739 ~----~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-gIiHrDIKP~NIll~~~g----- 808 (931)
. ....+|+||||+ +++|.+.+.......+++..++.++.||+.||.|||++ ||+||||||+|||++.++
T Consensus 111 ~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~ 189 (397)
T 1wak_A 111 KISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRR 189 (397)
T ss_dssp EEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHH
T ss_pred eecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhh
Confidence 7 567899999999 77777777665445699999999999999999999998 999999999999998775
Q ss_pred --------------------------------------------cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCC
Q 002356 809 --------------------------------------------HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQN 844 (931)
Q Consensus 809 --------------------------------------------~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (931)
.+||+|||++.....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~--------------------- 248 (397)
T 1wak_A 190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK--------------------- 248 (397)
T ss_dssp HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB---------------------
T ss_pred hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc---------------------
Confidence 799999999854321
Q ss_pred ccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 845 PVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 845 ~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
.....+||+.|+|||++.+..++.++|||||||+||+|++|+.||.+.+
T Consensus 249 ---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 297 (397)
T 1wak_A 249 ---------HFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHS 297 (397)
T ss_dssp ---------CSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred ---------cCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 1123469999999999999999999999999999999999999998654
No 195
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.6e-33 Score=315.05 Aligned_cols=220 Identities=27% Similarity=0.418 Sum_probs=180.9
Q ss_pred cccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHH-HHhcCCCCccceeEEEEeC
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI-LDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~i-l~~l~hpnIv~l~~~~~~~ 741 (931)
...+..++|++.+.||+|+||.||++.+..+++.||||++..... ......+..|+.+ ++.++||||+++++++...
T Consensus 45 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~ 122 (340)
T 3an0_A 45 NFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN--SQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE 122 (340)
T ss_dssp CCCCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCC--CHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECS
T ss_pred ceEEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccC--cHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeC
Confidence 446778899999999999999999999999999999999976432 2233455556655 7778999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCCcEEEEeccCC
Q 002356 742 THVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~-gIiHrDIKP~NIll~~~g~vkL~DFG~a 818 (931)
+.+|+||||+.| +|.+++... ....+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++
T Consensus 123 ~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~ 201 (340)
T 3an0_A 123 GDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 201 (340)
T ss_dssp SCEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHH
T ss_pred CcEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCc
Confidence 999999999964 999888641 345699999999999999999999987 9999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC----CCCCChhhHHHHHHHHHHHHcC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----AGHTSAVDWWALGILLYEMLYG 894 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~----~~~~~~~DiwSlGvil~ell~G 894 (931)
...... .......||+.|+|||++.+ ..++.++|||||||++|+|++|
T Consensus 202 ~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg 253 (340)
T 3an0_A 202 GYLVDS----------------------------VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAIL 253 (340)
T ss_dssp HHHSCH----------------------------HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHT
T ss_pred eecccc----------------------------cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHC
Confidence 543210 01122469999999999743 4688899999999999999999
Q ss_pred CCCCCC-CCHHHHHHHHHcC
Q 002356 895 YTPFRG-KTRQKTFANILHK 913 (931)
Q Consensus 895 ~~Pf~~-~~~~~~~~~I~~~ 913 (931)
+.||.. ....+.+..+..+
T Consensus 254 ~~p~~~~~~~~~~~~~~~~~ 273 (340)
T 3an0_A 254 RFPYDSWGTPFQQLKQVVEE 273 (340)
T ss_dssp SCSSCCCSCHHHHHHHHHHS
T ss_pred CCCCccccchHHHHHHHhcC
Confidence 999986 3445555555544
No 196
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.9e-33 Score=308.08 Aligned_cols=230 Identities=20% Similarity=0.262 Sum_probs=187.5
Q ss_pred cCCCccccccccccCcEEEEEEEEecC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEE-EeCC
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF-QTKT 742 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~---~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-~~~~ 742 (931)
...+|++.+.||+|+||.||++.+..+ ...+|+|.+... ........+.+|+.+++.++||||+++++++ ...+
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 100 (298)
T 3f66_A 23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100 (298)
T ss_dssp GGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS
T ss_pred cceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC--CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC
Confidence 345799999999999999999997543 346899988753 3455667889999999999999999999985 4567
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
..|+||||+.+++|.+++... ...++...++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 101 ~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~ 179 (298)
T 3f66_A 101 SPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 179 (298)
T ss_dssp CCEEEEECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred ceEEEEeCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECccccccccc
Confidence 889999999999999999764 3458999999999999999999999999999999999999999999999999996543
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~ 901 (931)
.... ..........||+.|+|||.+.+..++.++|||||||++|+|++ |.+||.+.
T Consensus 180 ~~~~-----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~ 236 (298)
T 3f66_A 180 DKEY-----------------------YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 236 (298)
T ss_dssp CGGG-----------------------CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS
T ss_pred ccch-----------------------hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccC
Confidence 1110 00112234568899999999999999999999999999999999 78888888
Q ss_pred CHHHHHHHHHcCCC-CCCCCCc
Q 002356 902 TRQKTFANILHKDL-KFPSSTP 922 (931)
Q Consensus 902 ~~~~~~~~I~~~~~-~~p~~~~ 922 (931)
+..+....+..+.. ..|...+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~ 258 (298)
T 3f66_A 237 NTFDITVYLLQGRRLLQPEYCP 258 (298)
T ss_dssp CTTTHHHHHHTTCCCCCCTTCC
T ss_pred CHHHHHHHHhcCCCCCCCccCC
Confidence 88788888877654 3344433
No 197
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=4.9e-34 Score=316.69 Aligned_cols=219 Identities=33% Similarity=0.531 Sum_probs=177.9
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeeccccc-----ChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~-----~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (931)
.++|.+.+.||+|+||.||++.+..+++.||||++.+.... .......+.+|+.+|+.++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 35799999999999999999999999999999998764321 1223345788999999999999999999987665
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc---EEEEeccCCc
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSC 819 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~---vkL~DFG~a~ 819 (931)
.|+||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||++.
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 165 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred -eEEEEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence 89999999999999998764 45999999999999999999999999999999999999987664 9999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc---CCCCCChhhHHHHHHHHHHHHcCCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYT 896 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~ell~G~~ 896 (931)
..... .......||+.|+|||++. ...++.++|||||||++|+|++|..
T Consensus 166 ~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~ 217 (322)
T 2ycf_A 166 ILGET----------------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 217 (322)
T ss_dssp ECCCC----------------------------HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSC
T ss_pred ecccc----------------------------cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 53210 0112356999999999974 4668889999999999999999999
Q ss_pred CCCCCCHH-HHHHHHHcCCCCC
Q 002356 897 PFRGKTRQ-KTFANILHKDLKF 917 (931)
Q Consensus 897 Pf~~~~~~-~~~~~I~~~~~~~ 917 (931)
||...... .+...+..+.+.+
T Consensus 218 pf~~~~~~~~~~~~~~~~~~~~ 239 (322)
T 2ycf_A 218 PFSEHRTQVSLKDQITSGKYNF 239 (322)
T ss_dssp SSCSTTCSSCHHHHHHHTCCCC
T ss_pred CCcccchHHHHHHHHHhCcccc
Confidence 99764432 4455556665544
No 198
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.4e-33 Score=309.53 Aligned_cols=207 Identities=23% Similarity=0.324 Sum_probs=174.8
Q ss_pred ccCCCccccccccccCcEEEEEEE----EecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVE----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~----~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
+....|++++.||+|+||.||+|. +..+++.||+|.+.... .......+.+|+.+|+.++||||+++++++...
T Consensus 18 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 95 (302)
T 4e5w_A 18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTED 95 (302)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-
T ss_pred hhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC
Confidence 456679999999999999999999 56789999999987543 233456788999999999999999999999876
Q ss_pred --CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 742 --THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 742 --~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
..+++||||+++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 96 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 96 GGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp --CCEEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred CCceEEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccc
Confidence 77899999999999999996543 349999999999999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~ 899 (931)
....... .........||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 175 ~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 230 (302)
T 4e5w_A 175 AIETDKE------------------------YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS 230 (302)
T ss_dssp ECCTTCC------------------------EEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred cccCCCc------------------------ceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCc
Confidence 5432110 0112234568899999999998889999999999999999999998763
No 199
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.1e-33 Score=308.87 Aligned_cols=216 Identities=25% Similarity=0.389 Sum_probs=178.3
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE-------
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ------- 739 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~------- 739 (931)
..++|++++.||+|+||.||++.+..+++.||+|.+... .......+.+|+.+++.++||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 85 (320)
T 2i6l_A 9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLT 85 (320)
T ss_dssp ETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCC
T ss_pred cCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccc
Confidence 357999999999999999999999999999999998754 4456678889999999999999999999873
Q ss_pred -------eCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEe-cCCcEE
Q 002356 740 -------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVS 811 (931)
Q Consensus 740 -------~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~-~~g~vk 811 (931)
.....|+||||+. ++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+|
T Consensus 86 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~k 161 (320)
T 2i6l_A 86 DDVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLK 161 (320)
T ss_dssp C----CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEE
T ss_pred cccccccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEE
Confidence 3478899999996 699999865 3489999999999999999999999999999999999997 567999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHH
Q 002356 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYE 890 (931)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~e 890 (931)
|+|||++........ .........||+.|+|||++.+ ..++.++|||||||++|+
T Consensus 162 l~Dfg~~~~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~e 217 (320)
T 2i6l_A 162 IGDFGLARIMDPHYS------------------------HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAE 217 (320)
T ss_dssp ECCCTTCBCC--------------------------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHH
T ss_pred EccCccccccCCCcc------------------------cccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHH
Confidence 999999965421100 0011234468999999999865 678889999999999999
Q ss_pred HHcCCCCCCCCCHHHHHHHHHcC
Q 002356 891 MLYGYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 891 ll~G~~Pf~~~~~~~~~~~I~~~ 913 (931)
|++|+.||.+.+..+.+..+...
T Consensus 218 l~~g~~pf~~~~~~~~~~~~~~~ 240 (320)
T 2i6l_A 218 MLTGKTLFAGAHELEQMQLILES 240 (320)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHH
T ss_pred HHhCCCCCCCCCHHHHHHHHHHh
Confidence 99999999999988888887754
No 200
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=3.3e-34 Score=314.43 Aligned_cols=227 Identities=26% Similarity=0.441 Sum_probs=168.7
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (931)
..+..++|.+.+.||+|+||.||++.+..+++.||+|.+..... ......+.+|+.+++.++||||+++++++...+.
T Consensus 10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 87 (303)
T 2vwi_A 10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDE 87 (303)
T ss_dssp ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEESSSC
T ss_pred cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc--chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCC
Confidence 44678899999999999999999999988999999998865421 2345677889999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhh------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccC
Q 002356 744 VCLITDYCPGGELFLLLDR------QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~------~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~ 817 (931)
.|+||||+.|++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 88 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred cEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 9999999999999999874 1234589999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCC
Q 002356 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYT 896 (931)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~ 896 (931)
+......... ..........||+.|+|||++.+ ..++.++|||||||++|+|++|+.
T Consensus 168 ~~~~~~~~~~----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~ 225 (303)
T 2vwi_A 168 SAFLATGGDI----------------------TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA 225 (303)
T ss_dssp HHHCC-------------------------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred hheeccCCCc----------------------cchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCC
Confidence 8654211100 00112234579999999999875 568899999999999999999999
Q ss_pred CCCCCCHHHHHHHHHcCC
Q 002356 897 PFRGKTRQKTFANILHKD 914 (931)
Q Consensus 897 Pf~~~~~~~~~~~I~~~~ 914 (931)
||.+.+..+.+.....+.
T Consensus 226 pf~~~~~~~~~~~~~~~~ 243 (303)
T 2vwi_A 226 PYHKYPPMKVLMLTLQND 243 (303)
T ss_dssp TTTTSCGGGHHHHHHTSS
T ss_pred CCccCchhhHHHHHhccC
Confidence 999877766666665543
No 201
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.3e-33 Score=341.12 Aligned_cols=225 Identities=23% Similarity=0.352 Sum_probs=186.0
Q ss_pred ccccccCcEEEEEEEE--ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccC
Q 002356 675 KPLGSGDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~--~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~ 752 (931)
+.||+|+||.||++.+ ..+++.||||+++... ........+.+|+.+|+.++|||||++++++.. +..++|||||.
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG-GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence 3799999999999965 4567899999997653 344556789999999999999999999999865 55889999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcc
Q 002356 753 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (931)
Q Consensus 753 ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 832 (931)
+|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 453 ~g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~----- 525 (635)
T 4fl3_A 453 LGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY----- 525 (635)
T ss_dssp TEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc-----
Confidence 99999999865 45999999999999999999999999999999999999999999999999998654321100
Q ss_pred hhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q 002356 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANIL 911 (931)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~~~~I~ 911 (931)
........||+.|+|||++.+..++.++|||||||+||+|++ |+.||.+.+..++...+.
T Consensus 526 -------------------~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~ 586 (635)
T 4fl3_A 526 -------------------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 586 (635)
T ss_dssp ----------------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH
T ss_pred -------------------cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 111223457889999999999999999999999999999998 999999999999999998
Q ss_pred cCC-CCCCCCCcCChhh
Q 002356 912 HKD-LKFPSSTPRSKEQ 927 (931)
Q Consensus 912 ~~~-~~~p~~~~~~~~~ 927 (931)
.+. +.+|...+.....
T Consensus 587 ~~~~~~~p~~~~~~l~~ 603 (635)
T 4fl3_A 587 KGERMGCPAGCPREMYD 603 (635)
T ss_dssp TTCCCCCCTTCCHHHHH
T ss_pred cCCCCCCCCCCCHHHHH
Confidence 874 5677766544433
No 202
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.7e-34 Score=320.42 Aligned_cols=205 Identities=20% Similarity=0.268 Sum_probs=173.4
Q ss_pred CCCccccccccccCcEEEEEEEEecC--------CeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccc------
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGS--------GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPA------ 733 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~--------~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~------ 733 (931)
.++|++.+.||+|+||.||++.+..+ ++.||+|++.+. ..+.+|+.+++.++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~ 112 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLY 112 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhc
Confidence 47999999999999999999999874 889999998754 35778999999999998887
Q ss_pred ---------eeEEEEe-CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEE
Q 002356 734 ---------LYASFQT-KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 803 (931)
Q Consensus 734 ---------l~~~~~~-~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIl 803 (931)
+++++.. ....|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 113 STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIF 191 (352)
T ss_dssp TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEE
T ss_pred cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEE
Confidence 6777766 78899999999 999999998764456999999999999999999999999999999999999
Q ss_pred EecCC--cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhH
Q 002356 804 LQGNG--HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (931)
Q Consensus 804 l~~~g--~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~Di 881 (931)
++.++ .+||+|||++.......... ...........||+.|+|||++.+..++.++||
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di 251 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHV--------------------AYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDL 251 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCC--------------------CCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHH
T ss_pred EcCCCCceEEEecCcceeeccCCCccc--------------------cccccccccccCCccccCHHHHccCCCCchhhH
Confidence 99988 89999999996543211100 001112234579999999999999899999999
Q ss_pred HHHHHHHHHHHcCCCCCCCC
Q 002356 882 WALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 882 wSlGvil~ell~G~~Pf~~~ 901 (931)
|||||+||+|++|+.||.+.
T Consensus 252 ~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 252 QSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp HHHHHHHHHHHHSCCTTGGG
T ss_pred HHHHHHHHHHHhCCCCcccC
Confidence 99999999999999999875
No 203
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.1e-33 Score=304.29 Aligned_cols=228 Identities=21% Similarity=0.275 Sum_probs=188.0
Q ss_pred CCccccccccccCcEEEEEEEEecCCe---EEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE-
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV- 744 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~---~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~- 744 (931)
-.|.+.+.||+|+||.||++.+..++. .||+|.+... ........+.+|+.+++.++||||+++++++...+..
T Consensus 21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (298)
T 3pls_A 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI--TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLP 98 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred eEEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc--ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCc
Confidence 357778999999999999999866544 7999998653 3445667889999999999999999999999866555
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
++||||+.+++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 99 ~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp EEEECCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EEEEecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999999999999764 345899999999999999999999999999999999999999999999999999654211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~ 903 (931)
.. ..........|++.|+|||.+.+..++.++|||||||++|+|++ |.+||...+.
T Consensus 178 ~~-----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~ 234 (298)
T 3pls_A 178 EY-----------------------YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP 234 (298)
T ss_dssp GG-----------------------GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG
T ss_pred cc-----------------------cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH
Confidence 10 01122334568999999999999999999999999999999999 6677777777
Q ss_pred HHHHHHHHcCC-CCCCCCCc
Q 002356 904 QKTFANILHKD-LKFPSSTP 922 (931)
Q Consensus 904 ~~~~~~I~~~~-~~~p~~~~ 922 (931)
.++...+..+. ...|...+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~ 254 (298)
T 3pls_A 235 FDLTHFLAQGRRLPQPEYCP 254 (298)
T ss_dssp GGHHHHHHTTCCCCCCTTCC
T ss_pred HHHHHHhhcCCCCCCCccch
Confidence 77777777654 34454443
No 204
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.1e-33 Score=314.56 Aligned_cols=211 Identities=23% Similarity=0.371 Sum_probs=180.8
Q ss_pred cccccCCCccccccccccCcEEEEEEE----EecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEE
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVE----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF 738 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~----~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~ 738 (931)
...+..++|++++.||+|+||.||++. +..+++.||+|.+... .......+.+|+.+++.++||||+++++++
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 93 (327)
T 3lxl_A 17 PTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHSDFIVKYRGVS 93 (327)
T ss_dssp CCBCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred hhhhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC---CHHHHHHHHHHHHHHHhcCCCceeEEEEEE
Confidence 344667899999999999999999999 4678999999998764 345567789999999999999999999988
Q ss_pred E--eCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEecc
Q 002356 739 Q--TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 816 (931)
Q Consensus 739 ~--~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG 816 (931)
. ....+|+||||+++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus 94 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 172 (327)
T 3lxl_A 94 YGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFG 172 (327)
T ss_dssp ECSSSCEEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGG
T ss_pred ecCCCceEEEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccc
Confidence 6 5577999999999999999997642 348999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCC
Q 002356 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYT 896 (931)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~ 896 (931)
++........ .........||+.|+|||++.+..++.++|||||||++|+|++|..
T Consensus 173 ~~~~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~ 228 (327)
T 3lxl_A 173 LAKLLPLDKD------------------------YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCD 228 (327)
T ss_dssp GCEECCTTCS------------------------EEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred cceecccCCc------------------------cceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCC
Confidence 9965431111 0112234568899999999998888999999999999999999999
Q ss_pred CCCCC
Q 002356 897 PFRGK 901 (931)
Q Consensus 897 Pf~~~ 901 (931)
||...
T Consensus 229 p~~~~ 233 (327)
T 3lxl_A 229 KSCSP 233 (327)
T ss_dssp GGGSH
T ss_pred CCccc
Confidence 99653
No 205
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.7e-33 Score=314.11 Aligned_cols=217 Identities=23% Similarity=0.361 Sum_probs=185.7
Q ss_pred cCCCccccccccccCcEEEEEEEEecCC-eEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCC------ccceeEEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSG-QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF------VPALYASFQ 739 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~-~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpn------Iv~l~~~~~ 739 (931)
..++|++.+.||+|+||.||+|.+..++ +.||+|++... ......+.+|+.+++.+.|++ ++.+++++.
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 92 (355)
T 2eu9_A 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN 92 (355)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE
T ss_pred ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee
Confidence 3579999999999999999999998776 79999998653 344567788999999987654 899999999
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEE---------------
Q 002356 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL--------------- 804 (931)
Q Consensus 740 ~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll--------------- 804 (931)
..+..|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 93 ~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 93 FHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred eCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccc
Confidence 999999999999 7788888877655569999999999999999999999999999999999999
Q ss_pred ----ecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhh
Q 002356 805 ----QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 880 (931)
Q Consensus 805 ----~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~D 880 (931)
+.++.+||+|||++.... .......||+.|+|||++.+..++.++|
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~D 221 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDH------------------------------EHHTTIVATRHYRPPEVILELGWAQPCD 221 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETT------------------------------SCCCSSCSCGGGCCHHHHTTCCCCTHHH
T ss_pred cccccCCCcEEEeecCcccccc------------------------------ccccCCcCCCcccCCeeeecCCCCCccc
Confidence 667899999999985422 1123457999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCC
Q 002356 881 WWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP 918 (931)
Q Consensus 881 iwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~~~~~p 918 (931)
||||||++|+|++|..||.+.+..+.+..+.+....+|
T Consensus 222 i~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p 259 (355)
T 2eu9_A 222 VWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIP 259 (355)
T ss_dssp HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCc
Confidence 99999999999999999999888877776655433333
No 206
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.5e-33 Score=318.92 Aligned_cols=212 Identities=25% Similarity=0.418 Sum_probs=185.0
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CC-----CccceeEEEEe
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HP-----FVPALYASFQT 740 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp-----nIv~l~~~~~~ 740 (931)
..++|++.+.||+|+||.||+|.+..+++.||||++... ......+..|+.+++.+. |+ +|+.+++++..
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence 357999999999999999999999999999999998753 334566778899988884 55 49999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH--HCCCccCCCCCCcEEEe--cCCcEEEEecc
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH--CQGIIYRDLKPENVLLQ--GNGHVSLTDFD 816 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH--~~gIiHrDIKP~NIll~--~~g~vkL~DFG 816 (931)
.+..|+||||+ +++|.+++.......+++..++.++.||+.||.||| ++||+||||||+|||++ .++.+||+|||
T Consensus 128 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 128 RNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred CCceEEEEecC-CCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence 99999999999 569999998765556999999999999999999999 57999999999999995 46789999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCC
Q 002356 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYT 896 (931)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~ 896 (931)
+++.... ......||+.|+|||++.+..++.++|||||||++|+|++|++
T Consensus 207 ~a~~~~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~ 256 (382)
T 2vx3_A 207 SSCQLGQ------------------------------RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEP 256 (382)
T ss_dssp TCEETTC------------------------------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred Cceeccc------------------------------ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 9865321 1224579999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHcC
Q 002356 897 PFRGKTRQKTFANILHK 913 (931)
Q Consensus 897 Pf~~~~~~~~~~~I~~~ 913 (931)
||.+.+..+.+.+|.+.
T Consensus 257 pf~~~~~~~~~~~i~~~ 273 (382)
T 2vx3_A 257 LFSGANEVDQMNKIVEV 273 (382)
T ss_dssp SSCCSSHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHH
Confidence 99999999888888763
No 207
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.2e-33 Score=306.93 Aligned_cols=207 Identities=21% Similarity=0.271 Sum_probs=174.0
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeE-EEEeCCeEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYA-SFQTKTHVC 745 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~-~~~~~~~~~ 745 (931)
..++|++.+.||+|+||.||++.+..+++.||+|++..... ...+.+|+.+++.+.|++++..+. ++......+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceE
Confidence 35789999999999999999999999999999999875432 235778999999998877655544 446788899
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEe---cCCcEEEEeccCCcccC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ---GNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~---~~g~vkL~DFG~a~~~~ 822 (931)
+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++....
T Consensus 82 lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 159 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EEEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEEec-CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence 999999 999999997543 4599999999999999999999999999999999999994 78899999999996543
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
..... ...+........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+
T Consensus 160 ~~~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 217 (296)
T 3uzp_A 160 DARTH--------------------QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG 217 (296)
T ss_dssp CTTTC--------------------CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred ccccc--------------------cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 22110 01112234566899999999999999999999999999999999999999986
No 208
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=3e-34 Score=325.14 Aligned_cols=202 Identities=19% Similarity=0.272 Sum_probs=158.6
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc--CCCCcccee-------EEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML--DHPFVPALY-------ASF 738 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l--~hpnIv~l~-------~~~ 738 (931)
...|++.+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.| +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 34699999999999999999999999999999999886554555667778886655555 699987754 555
Q ss_pred EeC-----------------CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHH------HHHHHHHHHHHHHHHHCCCccC
Q 002356 739 QTK-----------------THVCLITDYCPGGELFLLLDRQPTKVLKEDAV------RFYAAEVVVALEYLHCQGIIYR 795 (931)
Q Consensus 739 ~~~-----------------~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~------~~i~~qil~aL~~LH~~gIiHr 795 (931)
... ..+|+|||||+ ++|.+++.... ..++.... ..++.||+.||+|||++||+||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHr 218 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHG 218 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccC
Confidence 433 34899999997 89999998642 22444444 5677999999999999999999
Q ss_pred CCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC--C
Q 002356 796 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--A 873 (931)
Q Consensus 796 DIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~--~ 873 (931)
||||+|||++.+|.+||+|||++..... ......||+.|+|||++.+ .
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~------------------------------~~~~~~~t~~y~aPE~~~~~~~ 268 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGT------------------------------RGPASSVPVTYAPREFLNASTA 268 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTC------------------------------EEEGGGSCGGGCCHHHHTCSEE
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCC------------------------------CccCccCCcCCcChhhccCCCC
Confidence 9999999999999999999999864321 0113457799999999987 6
Q ss_pred CCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 874 GHTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 874 ~~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
.++.++|||||||+||+|++|+.||.+.
T Consensus 269 ~~~~~~DiwSlG~il~elltg~~Pf~~~ 296 (371)
T 3q60_A 269 TFTHALNAWQLGLSIYRVWCLFLPFGLV 296 (371)
T ss_dssp ECCHHHHHHHHHHHHHHHHHSSCSTTBC
T ss_pred CcCccccHHHHHHHHHHHHhCCCCCCCc
Confidence 7899999999999999999999999876
No 209
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3.5e-33 Score=313.63 Aligned_cols=222 Identities=23% Similarity=0.353 Sum_probs=182.9
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC-----C
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----T 742 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~ 742 (931)
.++|++.+.||+|+||.||++.+..+++.||+|.+... ........+.+|+.+++.++||||+++++++... .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc--ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 57899999999999999999999999999999998653 2344566788999999999999999999987654 6
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
..|+||||+. ++|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred eEEEEEeccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 7899999995 6999998763 49999999999999999999999999999999999999999999999999997653
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
........ ............||+.|+|||++.. ..++.++|||||||++|+|++|++||.+.
T Consensus 164 ~~~~~~~~-----------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 226 (353)
T 2b9h_A 164 ESAADNSE-----------------PTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR 226 (353)
T ss_dssp ---------------------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccC-----------------ccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 21110000 0000112234679999999998865 67888999999999999999999999999
Q ss_pred CHHHHHHHHHc
Q 002356 902 TRQKTFANILH 912 (931)
Q Consensus 902 ~~~~~~~~I~~ 912 (931)
+..+.+..+..
T Consensus 227 ~~~~~~~~~~~ 237 (353)
T 2b9h_A 227 DYRHQLLLIFG 237 (353)
T ss_dssp SHHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 88777766643
No 210
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=315.96 Aligned_cols=209 Identities=26% Similarity=0.430 Sum_probs=180.0
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe----
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH---- 743 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~---- 743 (931)
.++|.+.+.||+|+||.||++.+..+++.||+|.+.... ........+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 478999999999999999999999999999999997642 344556778899999999999999999999987653
Q ss_pred --EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 744 --VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 744 --~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
+|+||||+. ++|.+++.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred eeEEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 599999995 688877643 3999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.. ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+
T Consensus 177 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 226 (353)
T 3coi_A 177 DA------------------------------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 226 (353)
T ss_dssp -------------------------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBS
T ss_pred CC------------------------------CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 21 1123468999999999987 6788999999999999999999999999
Q ss_pred CCHHHHHHHHHc
Q 002356 901 KTRQKTFANILH 912 (931)
Q Consensus 901 ~~~~~~~~~I~~ 912 (931)
.+..+.+..+.+
T Consensus 227 ~~~~~~~~~i~~ 238 (353)
T 3coi_A 227 KDYLDQLTQILK 238 (353)
T ss_dssp SCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 988888777754
No 211
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.4e-33 Score=308.39 Aligned_cols=207 Identities=21% Similarity=0.275 Sum_probs=171.1
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeE-EEEeCCeEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYA-SFQTKTHVCL 746 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~-~~~~~~~~~l 746 (931)
.++|++.+.||+|+||.||++.+..+++.||+|++..... ...+.+|+.+++.+.|++++..+. ++...+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEE
Confidence 4789999999999999999999999999999998765422 234778999999998877665554 4577889999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEE---ecCCcEEEEeccCCcccCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll---~~~g~vkL~DFG~a~~~~~ 823 (931)
||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 83 v~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 83 VMELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp EEECC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred EEEcc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 99999 999999998543 359999999999999999999999999999999999999 7889999999999965432
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
.... ...+........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.
T Consensus 161 ~~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 218 (296)
T 4hgt_A 161 ARTH--------------------QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL 218 (296)
T ss_dssp TTTC--------------------CBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred cccC--------------------ccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCccc
Confidence 1110 011123344678999999999999999999999999999999999999999863
No 212
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.3e-33 Score=320.55 Aligned_cols=210 Identities=26% Similarity=0.430 Sum_probs=171.5
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC----
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT---- 742 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~---- 742 (931)
...+|++.+.||+|+||.||+|.+..++. +|+|.+..... ...+|+.+|+.++||||++++++|....
T Consensus 38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~-------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~ 109 (394)
T 4e7w_A 38 REIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR-------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKD 109 (394)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSS
T ss_pred ccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc-------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCC
Confidence 34679999999999999999999977666 77777654321 1236999999999999999999985433
Q ss_pred --eEEEEEeccCCCCHHHHHh-hCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEe-cCCcEEEEeccCC
Q 002356 743 --HVCLITDYCPGGELFLLLD-RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLS 818 (931)
Q Consensus 743 --~~~lVmE~~~ggsL~~~l~-~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~-~~g~vkL~DFG~a 818 (931)
++|+|||||.++.+..+.. ......+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 110 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a 189 (394)
T 4e7w_A 110 EVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSA 189 (394)
T ss_dssp CEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred ceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence 4889999996544333332 11234599999999999999999999999999999999999999 7899999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~P 897 (931)
+..... .......||+.|+|||++.+. .++.++|||||||++|+|++|++|
T Consensus 190 ~~~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~p 241 (394)
T 4e7w_A 190 KILIAG----------------------------EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPL 241 (394)
T ss_dssp EECCTT----------------------------CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred ccccCC----------------------------CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 654211 112345789999999999765 589999999999999999999999
Q ss_pred CCCCCHHHHHHHHHc
Q 002356 898 FRGKTRQKTFANILH 912 (931)
Q Consensus 898 f~~~~~~~~~~~I~~ 912 (931)
|.+.+..+.+..|.+
T Consensus 242 f~~~~~~~~l~~i~~ 256 (394)
T 4e7w_A 242 FPGESGIDQLVEIIK 256 (394)
T ss_dssp SCCSSHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHH
Confidence 999998888877765
No 213
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4.4e-33 Score=314.17 Aligned_cols=215 Identities=25% Similarity=0.402 Sum_probs=177.1
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccc--------cChHHHHHHHHHHHHHHhcCCCCccceeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------LNRNKVHRACAEREILDMLDHPFVPALYASF 738 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~--------~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~ 738 (931)
..++|++.+.||+|+||.||++.+.. ++.||+|.+..... ........+.+|+.+|+.++||||+++++++
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 98 (362)
T 3pg1_A 20 MQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIF 98 (362)
T ss_dssp TTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEE
T ss_pred hccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeE
Confidence 45799999999999999999999854 89999999865322 2233457889999999999999999999998
Q ss_pred Ee-----CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEE
Q 002356 739 QT-----KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLT 813 (931)
Q Consensus 739 ~~-----~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~ 813 (931)
.. ...+|+||||+. ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+
T Consensus 99 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~ 176 (362)
T 3pg1_A 99 VHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITIC 176 (362)
T ss_dssp EECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred EeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEE
Confidence 53 347899999995 6888888754 3469999999999999999999999999999999999999999999999
Q ss_pred eccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHH
Q 002356 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEML 892 (931)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell 892 (931)
|||++...... .......||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 177 Dfg~~~~~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~ 228 (362)
T 3pg1_A 177 DFNLAREDTAD----------------------------ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228 (362)
T ss_dssp CTTC-------------------------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHH
T ss_pred ecCcccccccc----------------------------cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHH
Confidence 99998532211 11234578999999999977 67889999999999999999
Q ss_pred cCCCCCCCCCHHHHHHHHHc
Q 002356 893 YGYTPFRGKTRQKTFANILH 912 (931)
Q Consensus 893 ~G~~Pf~~~~~~~~~~~I~~ 912 (931)
+|+.||.+.+..+.+.++..
T Consensus 229 ~g~~pf~~~~~~~~~~~i~~ 248 (362)
T 3pg1_A 229 NRKALFRGSTFYNQLNKIVE 248 (362)
T ss_dssp HSSCSCCCSSHHHHHHHHHH
T ss_pred hCCCCCCCCCHHHHHHHHHH
Confidence 99999999998888887764
No 214
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=6.8e-34 Score=315.92 Aligned_cols=206 Identities=26% Similarity=0.329 Sum_probs=176.6
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+..++|++.+.||+|+||.||++.+ .+++.||+|.+...... .....+.+|+.+++.++||||+++++++...+..
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 102 (326)
T 3uim_A 26 QVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 102 (326)
T ss_dssp HTTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCC
T ss_pred HHHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCc--hHHHHHHHHHHHHHhccCCCccceEEEEecCCce
Confidence 45678999999999999999999985 46889999998764321 1223578899999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 745 CLITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQ---GIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~---gIiHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
++||||+.+++|.+++.... ...+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~ 182 (326)
T 3uim_A 103 LLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 182 (326)
T ss_dssp EEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCE
T ss_pred EEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCcccc
Confidence 99999999999999998643 23489999999999999999999999 99999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~ 899 (931)
...... ........||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 183 ~~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 236 (326)
T 3uim_A 183 LMDYKD--------------------------THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236 (326)
T ss_dssp ECCSSS--------------------------SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred ccCccc--------------------------ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence 543111 112234569999999999988889999999999999999999999995
No 215
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.6e-33 Score=306.99 Aligned_cols=218 Identities=23% Similarity=0.432 Sum_probs=175.6
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
+..++|++.+.||+|+||.||++.+ .++.||+|.+... .....+.+|+.+|+.++||||+++++++.+ ..|
T Consensus 5 i~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~ 75 (307)
T 2eva_A 5 IDYKEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESE-----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVC 75 (307)
T ss_dssp CCGGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSST-----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTE
T ss_pred CCHhHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecCh-----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcE
Confidence 5667999999999999999999987 5789999998643 345678899999999999999999998763 478
Q ss_pred EEEeccCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCCCcEEEecCCc-EEEEeccCCcc
Q 002356 746 LITDYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHC---QGIIYRDLKPENVLLQGNGH-VSLTDFDLSCL 820 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~LH~---~gIiHrDIKP~NIll~~~g~-vkL~DFG~a~~ 820 (931)
+||||++|++|.+++..... ..++...+..++.||+.||.|||+ +||+||||||+|||++.++. +||+|||++..
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~ 155 (307)
T 2eva_A 76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD 155 (307)
T ss_dssp EEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---
T ss_pred EEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccc
Confidence 99999999999999986432 247899999999999999999999 89999999999999998886 79999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 156 ~~~------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 205 (307)
T 2eva_A 156 IQT------------------------------HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 205 (307)
T ss_dssp ---------------------------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTT
T ss_pred ccc------------------------------ccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchh
Confidence 321 01233599999999999999999999999999999999999999985
Q ss_pred C--CHHHHHHHHHcCC-CCCCCCCc
Q 002356 901 K--TRQKTFANILHKD-LKFPSSTP 922 (931)
Q Consensus 901 ~--~~~~~~~~I~~~~-~~~p~~~~ 922 (931)
. ....+...+..+. ..++...+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (307)
T 2eva_A 206 IGGPAFRIMWAVHNGTRPPLIKNLP 230 (307)
T ss_dssp TCSSHHHHHHHHHTTCCCCCBTTCC
T ss_pred hCccHHHHHHHHhcCCCCCcccccC
Confidence 3 3334444554443 34444433
No 216
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-33 Score=319.66 Aligned_cols=229 Identities=20% Similarity=0.273 Sum_probs=180.5
Q ss_pred CCccccccccccCcEEEEEEEEecCC---eEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE-eCCeE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ-TKTHV 744 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~---~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~ 744 (931)
..|.+.+.||+|+||.||++.+..++ ..+|+|.+... ........+.+|+.+++.++||||+++++++. ..+..
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 166 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 166 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC--SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCC
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCe
Confidence 35888999999999999999986442 46899988653 24456678999999999999999999999864 45688
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+||||+++++|.+++... ...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 167 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 167 LVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EEEEECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEEEECCCCCCHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 9999999999999999754 345899999999999999999999999999999999999999999999999999654211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~ 903 (931)
.. ..........||+.|+|||++.+..++.++|||||||++|+|++ |.+||.+.+.
T Consensus 246 ~~-----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~ 302 (373)
T 3c1x_A 246 EF-----------------------DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 302 (373)
T ss_dssp -----------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS
T ss_pred cc-----------------------ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH
Confidence 10 00011223467889999999999999999999999999999999 7899988877
Q ss_pred HHHHHHHHcCC-CCCCCCCcC
Q 002356 904 QKTFANILHKD-LKFPSSTPR 923 (931)
Q Consensus 904 ~~~~~~I~~~~-~~~p~~~~~ 923 (931)
.++...+.++. ...|...+.
T Consensus 303 ~~~~~~~~~~~~~~~p~~~~~ 323 (373)
T 3c1x_A 303 FDITVYLLQGRRLLQPEYCPD 323 (373)
T ss_dssp SCHHHHHHTTCCCCCCTTCCH
T ss_pred HHHHHHHHcCCCCCCCCCCCH
Confidence 77777777765 345554443
No 217
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=7.5e-34 Score=318.61 Aligned_cols=212 Identities=19% Similarity=0.182 Sum_probs=170.4
Q ss_pred ccCCCccccccccccCcEEEEEEEEec---CCeEEEEEEeecccccChH--------HHHHHHHHHHHHHhcCCCCccce
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRN--------KVHRACAEREILDMLDHPFVPAL 734 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~---~~~~~AvK~~~~~~~~~~~--------~~~~~~~E~~il~~l~hpnIv~l 734 (931)
+..++|.+.+.||+|+||.||+|.+.. ++..+|+|++......... ....+.+|+.+++.++||||+++
T Consensus 34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~ 113 (345)
T 2v62_A 34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF 113 (345)
T ss_dssp TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCccee
Confidence 446789999999999999999999987 7889999998764221111 11235578889999999999999
Q ss_pred eEEEEe----CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC--
Q 002356 735 YASFQT----KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-- 808 (931)
Q Consensus 735 ~~~~~~----~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g-- 808 (931)
++++.. ....|+||||+ |++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTT
T ss_pred ecccccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCC
Confidence 999987 78899999999 999999997653 599999999999999999999999999999999999999887
Q ss_pred cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHH
Q 002356 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (931)
Q Consensus 809 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil 888 (931)
.+||+|||+++......... ...........||+.|+|||++.+..++.++|||||||++
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 250 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHK--------------------QYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCM 250 (345)
T ss_dssp SEEECCCTTCEESSGGGCCC--------------------CCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHH
T ss_pred cEEEEeCCCceecccccccc--------------------cchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHH
Confidence 99999999996543211000 0001122456799999999999999999999999999999
Q ss_pred HHHHcCCCCCCC
Q 002356 889 YEMLYGYTPFRG 900 (931)
Q Consensus 889 ~ell~G~~Pf~~ 900 (931)
|+|++|+.||.+
T Consensus 251 ~ell~g~~pf~~ 262 (345)
T 2v62_A 251 LRWLCGKLPWEQ 262 (345)
T ss_dssp HHHHHSSCTTGG
T ss_pred HHHHhCCCCccc
Confidence 999999999965
No 218
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5.2e-33 Score=313.08 Aligned_cols=214 Identities=25% Similarity=0.393 Sum_probs=168.3
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC---
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--- 742 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--- 742 (931)
...++|++.+.||+|+||.||++.+..+++.||||.+..... ......+++..++.++||||++++++|....
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR----FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT----CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc----ccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 345799999999999999999999999999999999865422 2234567888888999999999999986533
Q ss_pred ----eEEEEEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHH--HCCCccCCCCCCcEEEec-CCcEEEE
Q 002356 743 ----HVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLH--CQGIIYRDLKPENVLLQG-NGHVSLT 813 (931)
Q Consensus 743 ----~~~lVmE~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH--~~gIiHrDIKP~NIll~~-~g~vkL~ 813 (931)
++++||||+.+ +|...+.. .....+++..++.++.||+.||.||| ++||+||||||+|||++. ++.+||+
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~ 174 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLC 174 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEEC
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEe
Confidence 38999999965 55554432 23456899999999999999999999 999999999999999996 8999999
Q ss_pred eccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC-CCChhhHHHHHHHHHHHH
Q 002356 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEML 892 (931)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~ell 892 (931)
|||++...... .......||+.|+|||++.+.. ++.++|||||||++|+|+
T Consensus 175 Dfg~a~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell 226 (360)
T 3e3p_A 175 DFGSAKKLSPS----------------------------EPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMM 226 (360)
T ss_dssp CCTTCBCCCTT----------------------------SCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred eCCCceecCCC----------------------------CCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence 99999654311 1123457899999999997654 799999999999999999
Q ss_pred cCCCCCCCCCHHHHHHHHHc
Q 002356 893 YGYTPFRGKTRQKTFANILH 912 (931)
Q Consensus 893 ~G~~Pf~~~~~~~~~~~I~~ 912 (931)
+|++||.+.+..+.+..+.+
T Consensus 227 ~g~~pf~~~~~~~~~~~~~~ 246 (360)
T 3e3p_A 227 LGEPIFRGDNSAGQLHEIVR 246 (360)
T ss_dssp HSSCSSCCSSHHHHHHHHHH
T ss_pred hCCCCcCCCChHHHHHHHHH
Confidence 99999999999888888865
No 219
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.9e-33 Score=316.64 Aligned_cols=205 Identities=24% Similarity=0.400 Sum_probs=175.4
Q ss_pred cccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-----------CCCc
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-----------HPFV 731 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-----------hpnI 731 (931)
+..+..++|++.+.||+|+||.||+|.+..+++.||+|++... ......+.+|+.+++.+. ||||
T Consensus 13 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i 88 (373)
T 1q8y_A 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHI 88 (373)
T ss_dssp TCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTB
T ss_pred CCcccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC----ccchhhhhHHHHHHHHhhcccccchhccccchH
Confidence 4456678999999999999999999999999999999998753 334566788999998875 8999
Q ss_pred cceeEEEEeCC----eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEec
Q 002356 732 PALYASFQTKT----HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQG 806 (931)
Q Consensus 732 v~l~~~~~~~~----~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-gIiHrDIKP~NIll~~ 806 (931)
+++++++...+ .+++||||+ +++|.+++.......+++..++.++.||+.||.|||++ ||+||||||+|||++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~ 167 (373)
T 1q8y_A 89 LKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEI 167 (373)
T ss_dssp CCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEE
T ss_pred HHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEec
Confidence 99999997654 889999999 99999999876556699999999999999999999998 9999999999999953
Q ss_pred ------CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhh
Q 002356 807 ------NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 880 (931)
Q Consensus 807 ------~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~D 880 (931)
.+.+||+|||++..... ......||+.|+|||++.+..++.++|
T Consensus 168 ~~~~~~~~~~kl~Dfg~a~~~~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~D 217 (373)
T 1q8y_A 168 VDSPENLIQIKIADLGNACWYDE------------------------------HYTNSIQTREYRSPEVLLGAPWGCGAD 217 (373)
T ss_dssp EETTTTEEEEEECCCTTCEETTB------------------------------CCCSCCSCGGGCCHHHHHTCCCCTHHH
T ss_pred cCCCcCcceEEEcccccccccCC------------------------------CCCCCCCCccccCcHHHhCCCCCchHh
Confidence 33799999999854321 112346899999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCC
Q 002356 881 WWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 881 iwSlGvil~ell~G~~Pf~~~~ 902 (931)
||||||++|+|++|+.||.+.+
T Consensus 218 i~slG~il~el~~g~~pf~~~~ 239 (373)
T 1q8y_A 218 IWSTACLIFELITGDFLFEPDE 239 (373)
T ss_dssp HHHHHHHHHHHHHSSCCC----
T ss_pred HHHHHHHHHHHHhCCCCCCCCc
Confidence 9999999999999999998654
No 220
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=313.10 Aligned_cols=215 Identities=27% Similarity=0.412 Sum_probs=175.8
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE----e
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ----T 740 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~----~ 740 (931)
.+..++|++.+.||+|+||.||++.+..+++.||+|++... .......+.+|+.+++.++||||+++++++. .
T Consensus 25 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (317)
T 2buj_A 25 IIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGA 101 (317)
T ss_dssp EETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETT
T ss_pred EECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCC
Confidence 35677899999999999999999999999999999998653 3456678889999999999999999999986 3
Q ss_pred CCeEEEEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCC
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a 818 (931)
....|+||||+.+++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus 102 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 102 KHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred CceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 45789999999999999998752 2356999999999999999999999999999999999999999999999999988
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC---CCChhhHHHHHHHHHHHHcCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG---HTSAVDWWALGILLYEMLYGY 895 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~---~~~~~DiwSlGvil~ell~G~ 895 (931)
......... ... ...........||+.|+|||++.... ++.++|||||||++|+|++|+
T Consensus 182 ~~~~~~~~~-----~~~-------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~ 243 (317)
T 2buj_A 182 NQACIHVEG-----SRQ-------------ALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243 (317)
T ss_dssp EESCEEEES-----HHH-------------HHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSS
T ss_pred hhccccccc-----ccc-------------cccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCC
Confidence 543210000 000 00001112346899999999997654 688999999999999999999
Q ss_pred CCCCC
Q 002356 896 TPFRG 900 (931)
Q Consensus 896 ~Pf~~ 900 (931)
.||..
T Consensus 244 ~p~~~ 248 (317)
T 2buj_A 244 GPYDM 248 (317)
T ss_dssp CTTHH
T ss_pred CChhh
Confidence 99953
No 221
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=7.2e-33 Score=303.28 Aligned_cols=234 Identities=27% Similarity=0.498 Sum_probs=182.1
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe--------
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-------- 740 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-------- 740 (931)
++|++.+.||+|+||.||++.+..+++.||+|.+... ......+.+|+.+++.++||||+++++++..
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 5799999999999999999999999999999998653 3456778899999999999999999998864
Q ss_pred -----CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEec
Q 002356 741 -----KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (931)
Q Consensus 741 -----~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DF 815 (931)
....|+||||+++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeC
Confidence 467899999999999999998643 45788999999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcC
Q 002356 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYG 894 (931)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G 894 (931)
|++............. ...............||+.|+|||++.+. .++.++|||||||++|+|++
T Consensus 161 g~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~- 226 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLD-------------SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY- 226 (303)
T ss_dssp CCCSCTTC--------------------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS-
T ss_pred cchhhcccccchhccc-------------cccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh-
Confidence 9996543211100000 00000111223456799999999999865 68899999999999999998
Q ss_pred CCCCC-CCCHHHHHHHHHcCCCCCCCCCcC
Q 002356 895 YTPFR-GKTRQKTFANILHKDLKFPSSTPR 923 (931)
Q Consensus 895 ~~Pf~-~~~~~~~~~~I~~~~~~~p~~~~~ 923 (931)
||. +.+..+++..+......+|...+.
T Consensus 227 --p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (303)
T 1zy4_A 227 --PFSTGMERVNILKKLRSVSIEFPPDFDD 254 (303)
T ss_dssp --CCSSHHHHHHHHHHHHSTTCCCCTTCCT
T ss_pred --ccCCchhHHHHHHhccccccccCccccc
Confidence 565 345567777888877777766543
No 222
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.9e-33 Score=303.88 Aligned_cols=197 Identities=24% Similarity=0.369 Sum_probs=173.5
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe-------
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------- 740 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------- 740 (931)
..+|++++.||+|+||.||++.+..+++.||+|.+.... ..+.+|+.+++.++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 457999999999999999999999899999999987642 245689999999999999999998864
Q ss_pred ---------CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEE
Q 002356 741 ---------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (931)
Q Consensus 741 ---------~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vk 811 (931)
...+|+||||+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEE
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEE
Confidence 45689999999999999999865445699999999999999999999999999999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHH
Q 002356 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (931)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el 891 (931)
|+|||++...... .......||+.|+|||++.+..++.++|||||||++|+|
T Consensus 163 l~Dfg~~~~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 214 (284)
T 2a19_B 163 IGDFGLVTSLKND----------------------------GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214 (284)
T ss_dssp ECCCTTCEESSCC----------------------------SCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHH
T ss_pred ECcchhheecccc----------------------------ccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHH
Confidence 9999998553211 011234699999999999999999999999999999999
Q ss_pred HcCCCCCC
Q 002356 892 LYGYTPFR 899 (931)
Q Consensus 892 l~G~~Pf~ 899 (931)
++|..||.
T Consensus 215 ~~~~~~~~ 222 (284)
T 2a19_B 215 LHVCDTAF 222 (284)
T ss_dssp HSCCSSHH
T ss_pred HhcCCcch
Confidence 99999885
No 223
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.1e-33 Score=310.31 Aligned_cols=222 Identities=26% Similarity=0.353 Sum_probs=162.2
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEEEE---
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQ--- 739 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~--- 739 (931)
..+...+|++.+.||+|+||.||++.+..+++.||+|.+... .......+.+|+.+++.+. ||||+++++++.
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~ 99 (337)
T 3ll6_A 23 VELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGK 99 (337)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECT
T ss_pred eeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC---chHHHHHHHHHHHHHHHhccCCChhhccccccccc
Confidence 345667899999999999999999999999999999998654 3455677889999999995 999999999984
Q ss_pred -----eCCeEEEEEeccCCCCHHHHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCCCcEEEecCCcEE
Q 002356 740 -----TKTHVCLITDYCPGGELFLLLDR-QPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVS 811 (931)
Q Consensus 740 -----~~~~~~lVmE~~~ggsL~~~l~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~g--IiHrDIKP~NIll~~~g~vk 811 (931)
....+++||||+ +|+|.+++.. .....+++..++.++.||+.||.|||++| |+||||||+|||++.++.+|
T Consensus 100 ~~~~~~~~~~~lv~e~~-~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~k 178 (337)
T 3ll6_A 100 EESDTGQAEFLLLTELC-KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIK 178 (337)
T ss_dssp TTSTTSSEEEEEEEECC-SEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEE
T ss_pred cccccCCceEEEEEEec-CCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEE
Confidence 345689999999 5799998865 22345999999999999999999999999 99999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhh---cCCCCCChhhHHHHHHHH
Q 002356 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII---AGAGHTSAVDWWALGILL 888 (931)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~---~~~~~~~~~DiwSlGvil 888 (931)
|+|||++............. .............||+.|+|||++ .+..++.++|||||||++
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il 243 (337)
T 3ll6_A 179 LCDFGSATTISHYPDYSWSA---------------QRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243 (337)
T ss_dssp BCCCTTCBCCSSCC----------------------------------------------CCTTSCSSHHHHHHHHHHHH
T ss_pred EecCccceeccccCcccccc---------------cccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHH
Confidence 99999997654221110000 000001122355799999999998 566778899999999999
Q ss_pred HHHHcCCCCCCCCCHH
Q 002356 889 YEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 889 ~ell~G~~Pf~~~~~~ 904 (931)
|+|++|+.||.+....
T Consensus 244 ~el~~g~~p~~~~~~~ 259 (337)
T 3ll6_A 244 YLLCFRQHPFEDGAKL 259 (337)
T ss_dssp HHHHHSSCCC------
T ss_pred HHHHhCCCCCcchhHH
Confidence 9999999999865543
No 224
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3.5e-33 Score=309.41 Aligned_cols=207 Identities=26% Similarity=0.362 Sum_probs=174.3
Q ss_pred ccCCCccccccccccCcEEEEEEEE----ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe-
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT- 740 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~----~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~- 740 (931)
+....|++++.||+|+||.||++.. ..+++.||+|++... ........+.+|+.+|+.++||||+++++++..
T Consensus 28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (318)
T 3lxp_A 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA 105 (318)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc--cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC
Confidence 3333449999999999999988754 457899999999765 234556778999999999999999999999987
Q ss_pred -CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 741 -KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 741 -~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
...+++||||+++++|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 106 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 106 GAASLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp TTTEEEEEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred CCceEEEEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccc
Confidence 47889999999999999999764 38999999999999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~ 899 (931)
....... .........||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 183 ~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~ 238 (318)
T 3lxp_A 183 AVPEGHE------------------------YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 238 (318)
T ss_dssp ECCTTCS------------------------EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred ccccccc------------------------ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCccc
Confidence 5432110 0112234568889999999998889999999999999999999999997
Q ss_pred CC
Q 002356 900 GK 901 (931)
Q Consensus 900 ~~ 901 (931)
..
T Consensus 239 ~~ 240 (318)
T 3lxp_A 239 SP 240 (318)
T ss_dssp SH
T ss_pred cc
Confidence 53
No 225
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.6e-33 Score=305.12 Aligned_cols=201 Identities=27% Similarity=0.395 Sum_probs=167.4
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHh--cCCCCccceeEEEEe---
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQT--- 740 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~--l~hpnIv~l~~~~~~--- 740 (931)
...++|++.+.||+|+||.||++.+ +++.||+|++... ....+..|.+++.. ++||||+++++++..
T Consensus 5 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~ 76 (301)
T 3q4u_A 5 TVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR------DEKSWFRETELYNTVMLRHENILGFIASDMTSRH 76 (301)
T ss_dssp CCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEET
T ss_pred cccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccC
Confidence 3467999999999999999999987 7899999998653 23456667777776 799999999998654
Q ss_pred -CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCccCCCCCCcEEEecCCcEE
Q 002356 741 -KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH--------CQGIIYRDLKPENVLLQGNGHVS 811 (931)
Q Consensus 741 -~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH--------~~gIiHrDIKP~NIll~~~g~vk 811 (931)
...+|+||||+++|+|.+++.. ..+++..++.++.||+.||.||| ++||+||||||+|||++.++.+|
T Consensus 77 ~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~k 153 (301)
T 3q4u_A 77 SSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCC 153 (301)
T ss_dssp TEEEEEEEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEE
T ss_pred CCceeEEehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEE
Confidence 3568999999999999999964 34999999999999999999999 99999999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC------CCCChhhHHHHH
Q 002356 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA------GHTSAVDWWALG 885 (931)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~------~~~~~~DiwSlG 885 (931)
|+|||++......... .........||+.|+|||++.+. .++.++||||||
T Consensus 154 l~Dfg~a~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG 210 (301)
T 3q4u_A 154 IADLGLAVMHSQSTNQ-----------------------LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFG 210 (301)
T ss_dssp ECCCTTCEEEETTTTE-----------------------EECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHH
T ss_pred EeeCCCeeeccccccc-----------------------ccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHH
Confidence 9999998654311110 00112345799999999999876 344689999999
Q ss_pred HHHHHHHcC----------CCCCCC
Q 002356 886 ILLYEMLYG----------YTPFRG 900 (931)
Q Consensus 886 vil~ell~G----------~~Pf~~ 900 (931)
|++|+|++| ..||..
T Consensus 211 ~il~el~tg~~~~~~~~~~~~pf~~ 235 (301)
T 3q4u_A 211 LVLWEVARRMVSNGIVEDYKPPFYD 235 (301)
T ss_dssp HHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred HHHHHHHhhhcCccccccccccccc
Confidence 999999999 899964
No 226
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3.8e-33 Score=311.79 Aligned_cols=216 Identities=25% Similarity=0.405 Sum_probs=152.2
Q ss_pred cCCCccccc-cccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe----C
Q 002356 667 NLQHFRPIK-PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----K 741 (931)
Q Consensus 667 ~~~~y~i~~-~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~----~ 741 (931)
..++|.+.+ .||+|+||.||++.+..+++.||+|++.... .........++.++||||+++++++.. .
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 98 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-------KARQEVDHHWQASGGPHIVCILDVYENMHHGK 98 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-------HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-------HHHHHHHHHHHhcCCCChHHHHHHHhhccCCC
Confidence 457899965 5999999999999999999999999986531 112223334667799999999999976 5
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec---CCcEEEEeccCC
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLS 818 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~---~g~vkL~DFG~a 818 (931)
..+|+|||||.|++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 99 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 99 RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred ceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 66899999999999999998776567999999999999999999999999999999999999976 445999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
..... .......||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus 179 ~~~~~-----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf 229 (336)
T 3fhr_A 179 KETTQ-----------------------------NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 229 (336)
T ss_dssp EEC---------------------------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred eeccc-----------------------------cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 54321 1122456899999999998888889999999999999999999999
Q ss_pred CCCCHHHH----HHHHHcCCCCCC
Q 002356 899 RGKTRQKT----FANILHKDLKFP 918 (931)
Q Consensus 899 ~~~~~~~~----~~~I~~~~~~~p 918 (931)
.+.....+ ...+..+...+|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~ 253 (336)
T 3fhr_A 230 YSNTGQAISPGMKRRIRLGQYGFP 253 (336)
T ss_dssp ---------------------CCC
T ss_pred CCccchhhhhhHHHhhhccccccC
Confidence 87665443 334444444444
No 227
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=8.6e-33 Score=302.05 Aligned_cols=206 Identities=27% Similarity=0.387 Sum_probs=175.0
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
...++|.....||+|+||.||++.+..+++.||+|.+... .......+.+|+.+++.++||||+++++++...+..+
T Consensus 19 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 95 (295)
T 2clq_A 19 YEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIK 95 (295)
T ss_dssp ECBCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC---CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred ccccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC---chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEE
Confidence 4455677777999999999999999999999999998764 2344567889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec-CCcEEEEeccCCcccCC
Q 002356 746 LITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~-~g~vkL~DFG~a~~~~~ 823 (931)
+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+|+||||+||+++. ++.+||+|||++.....
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 96 IFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175 (295)
T ss_dssp EEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred EEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence 9999999999999998653 234678999999999999999999999999999999999997 89999999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC--CCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~--~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
. ........||+.|+|||++.+.. ++.++|||||||++|+|++|+.||...
T Consensus 176 ~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (295)
T 2clq_A 176 I---------------------------NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL 228 (295)
T ss_dssp --------------------------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGG
T ss_pred C---------------------------CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCC
Confidence 1 01123456999999999997643 788999999999999999999999754
No 228
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.5e-33 Score=319.37 Aligned_cols=206 Identities=27% Similarity=0.428 Sum_probs=158.0
Q ss_pred CCCcccc-ccccccCcEEEEEEEEe--cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe--CC
Q 002356 668 LQHFRPI-KPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KT 742 (931)
Q Consensus 668 ~~~y~i~-~~LG~G~~g~Vy~~~~~--~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~ 742 (931)
.+.|.+. +.||+|+||.||+|.+. .+++.||+|.+..... ...+.+|+.+|+.++||||+++++++.. ..
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADR 93 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTT
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCC
Confidence 3467774 47999999999999976 4688999999875422 2357789999999999999999999954 77
Q ss_pred eEEEEEeccCCCCHHHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEE----ecCCcEE
Q 002356 743 HVCLITDYCPGGELFLLLDRQ-------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVS 811 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~-------~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll----~~~g~vk 811 (931)
.+|+||||+ +++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+|
T Consensus 94 ~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~k 172 (405)
T 3rgf_A 94 KVWLLFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVK 172 (405)
T ss_dssp EEEEEEECC-SEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEE
T ss_pred eEEEEEeCC-CCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEE
Confidence 899999999 56888887632 11248999999999999999999999999999999999999 6678999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHH
Q 002356 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYE 890 (931)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~e 890 (931)
|+|||+++....... ........+||+.|+|||++.+. .++.++|||||||+||+
T Consensus 173 l~Dfg~a~~~~~~~~------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~e 228 (405)
T 3rgf_A 173 IADMGFARLFNSPLK------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAE 228 (405)
T ss_dssp ECCTTCCC----------------------------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHH
T ss_pred EEECCCceecCCCCc------------------------ccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHH
Confidence 999999965431100 11223456899999999999874 48899999999999999
Q ss_pred HHcCCCCCCCCCH
Q 002356 891 MLYGYTPFRGKTR 903 (931)
Q Consensus 891 ll~G~~Pf~~~~~ 903 (931)
|++|.+||.+.+.
T Consensus 229 ll~g~~pf~~~~~ 241 (405)
T 3rgf_A 229 LLTSEPIFHCRQE 241 (405)
T ss_dssp HHHSSCTTCCCC-
T ss_pred HHhCCCCCCCccc
Confidence 9999999987654
No 229
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.3e-32 Score=321.30 Aligned_cols=208 Identities=23% Similarity=0.293 Sum_probs=177.1
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCC-CCccceeEEEEeCCeEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH-PFVPALYASFQTKTHVC 745 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~h-pnIv~l~~~~~~~~~~~ 745 (931)
..++|++.+.||+|+||.||++.+..+++.||||++..... ...+..|+++++.|.| ++|+.+..++......|
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~ 79 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNV 79 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEE
Confidence 45799999999999999999999999999999998875432 1346789999999976 66777777778889999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEE---ecCCcEEEEeccCCcccC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll---~~~g~vkL~DFG~a~~~~ 822 (931)
|||||+ +++|.+++.... ..+++..++.|+.||+.||.|||++||+||||||+|||| +.++.+||+|||++....
T Consensus 80 lvme~~-g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp EEEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEECC-CCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 999999 999999998543 459999999999999999999999999999999999999 578999999999997643
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
..... ...++.......||+.|+|||++.+..++.++|||||||+||+|++|+.||.+.
T Consensus 158 ~~~~~--------------------~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~ 216 (483)
T 3sv0_A 158 DTSTH--------------------QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGL 216 (483)
T ss_dssp CTTTC--------------------CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred CCccc--------------------cccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccc
Confidence 21110 011223345678999999999999999999999999999999999999999874
No 230
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.5e-33 Score=310.97 Aligned_cols=206 Identities=27% Similarity=0.359 Sum_probs=175.5
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccCh---HHHHHHHHHHHHHHhcC--CCCccceeEEEE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDMLD--HPFVPALYASFQ 739 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~---~~~~~~~~E~~il~~l~--hpnIv~l~~~~~ 739 (931)
....++|++.+.||+|+||.||++.+..+++.||+|.+........ .....+.+|+.+++.+. ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 3456799999999999999999999999999999999976533221 12244567999999995 599999999999
Q ss_pred eCCeEEEEEeccCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEe-cCCcEEEEeccC
Q 002356 740 TKTHVCLITDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDL 817 (931)
Q Consensus 740 ~~~~~~lVmE~~~g-gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~-~~g~vkL~DFG~ 817 (931)
..+..++|||++.+ ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred cCCcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 99999999999976 8999999864 3489999999999999999999999999999999999999 788999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCC-CChhhHHHHHHHHHHHHcCCC
Q 002356 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYT 896 (931)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~ell~G~~ 896 (931)
+..... .......||+.|+|||++.+..+ +.++|||||||++|+|++|+.
T Consensus 197 ~~~~~~-----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~ 247 (320)
T 3a99_A 197 GALLKD-----------------------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 247 (320)
T ss_dssp CEECCS-----------------------------SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSC
T ss_pred cccccc-----------------------------ccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCC
Confidence 865321 11123569999999999977665 678999999999999999999
Q ss_pred CCCCC
Q 002356 897 PFRGK 901 (931)
Q Consensus 897 Pf~~~ 901 (931)
||...
T Consensus 248 pf~~~ 252 (320)
T 3a99_A 248 PFEHD 252 (320)
T ss_dssp SCCSH
T ss_pred CCCCh
Confidence 99753
No 231
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=2.4e-33 Score=310.20 Aligned_cols=227 Identities=24% Similarity=0.313 Sum_probs=185.4
Q ss_pred ccccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
..+.+..++|++.+.||+|+||.||++.+.. .+|+|++..... .......+.+|+.+++.++||||+++++++...
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 101 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERD-NEDQLKAFKREVMAYRQTRHENVVLFMGACMSP 101 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSC-CCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCC-CHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence 4556788999999999999999999999854 499999876422 222334567899999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
..+++||||+.|++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++...
T Consensus 102 ~~~~iv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 102 PHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp SCEEEECBCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred CceEEEeecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 99999999999999999997643 4589999999999999999999999999999999999998 789999999998643
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC---------CCCCChhhHHHHHHHHHHHH
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---------AGHTSAVDWWALGILLYEML 892 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~---------~~~~~~~DiwSlGvil~ell 892 (931)
...... ..........||+.|+|||++.. ..++.++|||||||++|+|+
T Consensus 180 ~~~~~~----------------------~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~ 237 (319)
T 2y4i_B 180 GVLQAG----------------------RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELH 237 (319)
T ss_dssp ------------------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHH
T ss_pred cccccc----------------------ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHH
Confidence 211100 01112234569999999999974 34788999999999999999
Q ss_pred cCCCCCCCCCHHHHHHHHHcCCCC
Q 002356 893 YGYTPFRGKTRQKTFANILHKDLK 916 (931)
Q Consensus 893 ~G~~Pf~~~~~~~~~~~I~~~~~~ 916 (931)
+|+.||.+.+...++..+..+...
T Consensus 238 ~g~~p~~~~~~~~~~~~~~~~~~~ 261 (319)
T 2y4i_B 238 AREWPFKTQPAEAIIWQMGTGMKP 261 (319)
T ss_dssp HSSCSSSSCCHHHHHHHHHTTCCC
T ss_pred hCCCCCCCCCHHHHHHHhccCCCC
Confidence 999999999999998888876543
No 232
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.3e-32 Score=300.62 Aligned_cols=229 Identities=24% Similarity=0.386 Sum_probs=182.9
Q ss_pred ccccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC--CCCccceeEEEE
Q 002356 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD--HPFVPALYASFQ 739 (931)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~--hpnIv~l~~~~~ 739 (931)
....+..++|++.+.||+|+||.||++.+. +++.||+|++..... .......+.+|+.+++.+. ||||+++++++.
T Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~ 98 (313)
T 3cek_A 21 QSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI 98 (313)
T ss_dssp CEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEE
T ss_pred eeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccc-cccchHHHHHHHHHHHhccccCCceEEEEEEee
Confidence 444567788999999999999999999984 588999999976432 4456678899999999996 599999999999
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 740 ~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
..+..|+|||+ .+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++.
T Consensus 99 ~~~~~~lv~e~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~ 174 (313)
T 3cek_A 99 TDQYIYMVMEC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIAN 174 (313)
T ss_dssp CSSEEEEEECC-CSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSC
T ss_pred cCCEEEEEEec-CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccccc
Confidence 99999999995 589999999875 3589999999999999999999999999999999999997 5899999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-----------CCCCChhhHHHHHHHH
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----------AGHTSAVDWWALGILL 888 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-----------~~~~~~~DiwSlGvil 888 (931)
....... ........||+.|+|||++.+ ..++.++|||||||++
T Consensus 175 ~~~~~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il 229 (313)
T 3cek_A 175 QMQPDTT-------------------------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 229 (313)
T ss_dssp C---------------------------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHH
T ss_pred cccCccc-------------------------cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHH
Confidence 5421110 011234579999999999975 4678899999999999
Q ss_pred HHHHcCCCCCCCC-CHHHHHHHHHcCC--CCCCCCC
Q 002356 889 YEMLYGYTPFRGK-TRQKTFANILHKD--LKFPSST 921 (931)
Q Consensus 889 ~ell~G~~Pf~~~-~~~~~~~~I~~~~--~~~p~~~ 921 (931)
|+|++|..||... .....+..+.... ..+|...
T Consensus 230 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (313)
T 3cek_A 230 YYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP 265 (313)
T ss_dssp HHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCS
T ss_pred HHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccc
Confidence 9999999999865 3445555555543 3445443
No 233
>3ewk_A Sensor protein; PAS domain, alpha/beta fold, kinase, phosphoprotein, transfe flavoprotein; HET: FAD; 2.34A {Methylococcus capsulatus}
Probab=100.00 E-value=4.1e-31 Score=277.90 Aligned_cols=220 Identities=22% Similarity=0.444 Sum_probs=206.3
Q ss_pred EEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEE
Q 002356 202 FVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLL 281 (931)
Q Consensus 202 i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w~~~ 281 (931)
|+++|. +|+|+++|++|++++||+++|++|+++..+.++.........++..+..+..+.++++.+++||+.+|+.+
T Consensus 2 i~i~D~---~g~i~~~N~a~~~l~Gy~~~el~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~ 78 (227)
T 3ewk_A 2 VSITDL---QGRILYANDNFCAVSRYGREELVGQDHRIVNSGYHGKAYIRDMWRTISRGNIWQGEFCNRRKDGTRYWVDS 78 (227)
T ss_dssp EEEEET---TCBEEEECHHHHHHTTCCHHHHTTSBGGGGCCSCSCHHHHHHHHHHHTTTCCEEEEEEEECSSSCEEEEEE
T ss_pred EEEECC---CCcEEehHHHHHHHHCcCHHHHcCCCHHHcCCCCCCHHHHHHHHHHHHcCCeEEEEEEEEcCCCCEEeeee
Confidence 678888 88899999999999999999999999888877777778888889999999999999999999999999999
Q ss_pred EeeeeecCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhHHHHHHHHHhHHHHHHHHHHccCCCCcccCCCCCcc
Q 002356 282 TIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSLSESTNRPPI 361 (931)
Q Consensus 282 ~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 361 (931)
++.|++|.+|.+.+++++.+|||++|++|++|+.
T Consensus 79 ~~~p~~d~~g~~~~~~~~~~DIT~~k~~e~~l~~---------------------------------------------- 112 (227)
T 3ewk_A 79 TIVPLMDNAGKPRQYISIRRDITAQKEAEAQLAR---------------------------------------------- 112 (227)
T ss_dssp EEEEEECSSSCEEEEEEEEEECTTTTHHHHHHHH----------------------------------------------
T ss_pred EEEEEEcCCCCEEEEEEEEEehhhHHHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999999988762
Q ss_pred cccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhcccccCCccccccccccccCCCCCCCccccc
Q 002356 362 IRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEI 441 (931)
Q Consensus 362 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 441 (931)
T Consensus 113 -------------------------------------------------------------------------------- 112 (227)
T 3ewk_A 113 -------------------------------------------------------------------------------- 112 (227)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCCCCCCCCchhhHHHHHhhhhcccHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCC
Q 002356 442 IMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCR 521 (931)
Q Consensus 442 ~~~~~~~~~~~~~~~dv~~r~~~~~~l~~~~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~ 521 (931)
++.++++++++|+++|.+|+ |+++|++|++++||+.+|++|+++.
T Consensus 113 --------------------------------~~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~G~~~~e~~g~~~~ 157 (227)
T 3ewk_A 113 --------------------------------LKQAMDANSEMILLTDRAGR---IIYANPALCRFSGMAEGELLGQSPS 157 (227)
T ss_dssp --------------------------------HHHHHHTCCSEEEEECTTSC---EEEECHHHHHHHTCCTHHHHSSCGG
T ss_pred --------------------------------HHHHHhcCcCeEEEEcCCCc---EEEEchHHHHHhCCCHHHHcCCChh
Confidence 67788899999999999888 9999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCc------EEEEEEEEEeeecCCCCEEEEEEEEec
Q 002356 522 FLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGK------KFWNLFHLQPMRDQKGEVQYFIGVQLD 585 (931)
Q Consensus 522 ~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~------~~wv~~~~~pi~d~~G~~~~~vgi~rD 585 (931)
.+.++.........++..+..+..+.+|+..++++|. .+|+++++.|++|.+|.+++++++++|
T Consensus 158 ~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~k~G~~~~dg~~~~~~~~~~pi~d~~g~~~~~v~i~~D 227 (227)
T 3ewk_A 158 ILDSPLADQETLAAMQEALQAGQPWSGRLLNRRRTGPAPHDAEDYWAEISTTPIHTDGNGLVGYVQIQHD 227 (227)
T ss_dssp GGBCTTSCHHHHHHHHHHHHHTCCEECCEEEEEECCSSSSCEEEEEEEEEEEEEECSSSCEEEEEEEEEC
T ss_pred hccCCCCCHHHHHHHHHHHHcCCceeEEEEEECCCCCcCcccceEEEEEEEEEEECCCCCEEEEEEEecC
Confidence 8999988888999999999999999999999999997 899999999999999999999999998
No 234
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=7.7e-33 Score=304.57 Aligned_cols=205 Identities=23% Similarity=0.283 Sum_probs=174.0
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccc-cChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-LNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
.|...+.||+|+||.||++.+ ++..||+|.+..... ........+.+|+.+++.++||||+++++++...+..|+||
T Consensus 32 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 109 (307)
T 2nru_A 32 ISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVY 109 (307)
T ss_dssp TTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred ccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEE
Confidence 466668999999999999986 678999999875432 23445677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 749 DYCPGGELFLLLDRQ-PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 749 E~~~ggsL~~~l~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
||+++++|.+++... ....+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus 110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~- 188 (307)
T 2nru_A 110 VYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ- 188 (307)
T ss_dssp ECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSS-
T ss_pred EecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccc-
Confidence 999999999999743 234589999999999999999999999999999999999999999999999999865321110
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
........||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+..
T Consensus 189 ------------------------~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 238 (307)
T 2nru_A 189 ------------------------TVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHR 238 (307)
T ss_dssp ------------------------CEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTB
T ss_pred ------------------------cccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCc
Confidence 011234579999999999875 47889999999999999999999998643
No 235
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.6e-32 Score=330.94 Aligned_cols=232 Identities=25% Similarity=0.381 Sum_probs=193.0
Q ss_pred cccCCCccccccccccCcEEEEEEEEecC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~---~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
.+..++|++.+.||+|+||.||++.+..+ +..+|+|.+... ........+.+|+.+|+.++||||+++++++. .
T Consensus 386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~ 462 (656)
T 2j0j_A 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E 462 (656)
T ss_dssp BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST--TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence 45567899999999999999999998653 568999988653 23445577899999999999999999999884 4
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
+..|+||||+++|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred CceEEEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeec
Confidence 66899999999999999998653 35899999999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~ 900 (931)
.... ........||+.|+|||++.+..++.++|||||||++|+|++ |.+||.+
T Consensus 542 ~~~~--------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 595 (656)
T 2j0j_A 542 EDST--------------------------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595 (656)
T ss_dssp CC------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CCCc--------------------------ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCC
Confidence 2111 011123457889999999998899999999999999999997 9999999
Q ss_pred CCHHHHHHHHHcCC-CCCCCCCcCChh
Q 002356 901 KTRQKTFANILHKD-LKFPSSTPRSKE 926 (931)
Q Consensus 901 ~~~~~~~~~I~~~~-~~~p~~~~~~~~ 926 (931)
.+..+++..+.++. +.+|...+....
T Consensus 596 ~~~~~~~~~i~~~~~~~~~~~~~~~l~ 622 (656)
T 2j0j_A 596 VKNNDVIGRIENGERLPMPPNCPPTLY 622 (656)
T ss_dssp CCHHHHHHHHHHTCCCCCCTTCCHHHH
T ss_pred CCHHHHHHHHHcCCCCCCCccccHHHH
Confidence 99999999998764 567766654433
No 236
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-33 Score=308.61 Aligned_cols=204 Identities=28% Similarity=0.415 Sum_probs=166.0
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccCh---HHHHHHHHHHHHHHhc----CCCCccceeEEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDML----DHPFVPALYASF 738 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~---~~~~~~~~E~~il~~l----~hpnIv~l~~~~ 738 (931)
...++|++.+.||+|+||.||++.+..+++.||+|++........ .....+.+|+.+++.+ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 446789999999999999999999999999999999976533221 1223455799999988 899999999999
Q ss_pred EeCCeEEEEEec-cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEe-cCCcEEEEecc
Q 002356 739 QTKTHVCLITDY-CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFD 816 (931)
Q Consensus 739 ~~~~~~~lVmE~-~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~-~~g~vkL~DFG 816 (931)
...+..++|||+ +.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg 185 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG 185 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCS
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcc
Confidence 999999999999 7899999999875 3499999999999999999999999999999999999999 78999999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCC-ChhhHHHHHHHHHHHHcCC
Q 002356 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGY 895 (931)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~ell~G~ 895 (931)
++...... ......||+.|+|||++.+..+. .++|||||||++|+|++|+
T Consensus 186 ~~~~~~~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~ 236 (312)
T 2iwi_A 186 SGALLHDE-----------------------------PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD 236 (312)
T ss_dssp SCEECCSS-----------------------------CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSS
T ss_pred hhhhcccC-----------------------------cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCC
Confidence 98654211 12245699999999999776664 4899999999999999999
Q ss_pred CCCCC
Q 002356 896 TPFRG 900 (931)
Q Consensus 896 ~Pf~~ 900 (931)
.||..
T Consensus 237 ~pf~~ 241 (312)
T 2iwi_A 237 IPFER 241 (312)
T ss_dssp CSCCS
T ss_pred CCCCC
Confidence 99965
No 237
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4.2e-32 Score=299.92 Aligned_cols=224 Identities=27% Similarity=0.434 Sum_probs=170.2
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
....++|++++.||+|+||.||++.+..+++.||+|++..... .......+..+..+++.++||||+++++++...+.+
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~ 99 (318)
T 2dyl_A 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN-KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDV 99 (318)
T ss_dssp ECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC-HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred hhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcE
Confidence 4567799999999999999999999999999999999976532 222233344555678888999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
|+||||+ ++.+..+.... ...+++..++.++.||+.||.|||++ ||+|+||||+||+++.++.+||+|||++.....
T Consensus 100 ~lv~e~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 100 FIAMELM-GTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp EEEECCC-SEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EEEEecc-CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 9999999 66666666542 24599999999999999999999996 999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc-----CCCCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
. .......||+.|+|||++. ...++.++|||||||++|+|++|+.||
T Consensus 178 ~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf 229 (318)
T 2dyl_A 178 D----------------------------KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPY 229 (318)
T ss_dssp -------------------------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred C----------------------------ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCC
Confidence 1 0112346999999999994 456788999999999999999999999
Q ss_pred CC-CCHHHHHHHHHcCCC-CCCC
Q 002356 899 RG-KTRQKTFANILHKDL-KFPS 919 (931)
Q Consensus 899 ~~-~~~~~~~~~I~~~~~-~~p~ 919 (931)
.. ....+.+..+..+.. .+|.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~ 252 (318)
T 2dyl_A 230 KNCKTDFEVLTKVLQEEPPLLPG 252 (318)
T ss_dssp TTCCSHHHHHHHHHHSCCCCCCS
T ss_pred CCCCccHHHHHHHhccCCCCCCc
Confidence 87 566677777777654 3443
No 238
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-32 Score=304.04 Aligned_cols=209 Identities=23% Similarity=0.388 Sum_probs=177.4
Q ss_pred ccccCCCccccccccccCcEEEEEEEE----ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~----~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (931)
..+..++|++++.||+|+||.||++.. ..+++.||+|.+... .......+.+|+.+++.++||||+++++++.
T Consensus 36 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 112 (326)
T 2w1i_A 36 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCY 112 (326)
T ss_dssp -CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred cccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEE
Confidence 345677899999999999999999984 568999999998764 3455678899999999999999999999886
Q ss_pred eC--CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccC
Q 002356 740 TK--THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (931)
Q Consensus 740 ~~--~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~ 817 (931)
.. ..+++||||+++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus 113 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 113 SAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp C----CCEEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred ecCCCceEEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcc
Confidence 54 47899999999999999998753 3589999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCC
Q 002356 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~P 897 (931)
+......... ........+++.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 192 ~~~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~ 247 (326)
T 2w1i_A 192 TKVLPQDKEY------------------------YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK 247 (326)
T ss_dssp CEECCSSCSE------------------------EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCG
T ss_pred hhhccccccc------------------------cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCC
Confidence 9654321100 0112234578889999999988889999999999999999999999
Q ss_pred CCC
Q 002356 898 FRG 900 (931)
Q Consensus 898 f~~ 900 (931)
|..
T Consensus 248 ~~~ 250 (326)
T 2w1i_A 248 SKS 250 (326)
T ss_dssp GGS
T ss_pred CCC
Confidence 864
No 239
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.98 E-value=4.2e-32 Score=301.76 Aligned_cols=209 Identities=25% Similarity=0.387 Sum_probs=158.6
Q ss_pred cccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHH-HHHhcCCCCccceeEEEEeC
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~ 741 (931)
.+.+..++|++.+.||+|+||.||++.+..+++.||+|.+.... .......+..|+. +++.++||||+++++++...
T Consensus 16 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~ 93 (327)
T 3aln_A 16 HWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV--DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFRE 93 (327)
T ss_dssp EECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC--CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECS
T ss_pred hcccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc--CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeC
Confidence 34567889999999999999999999999999999999997642 2334445556666 67778999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCCcEEEEeccC
Q 002356 742 THVCLITDYCPGGELFLLLDR---QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDL 817 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~---~~~~~l~~~~~~~i~~qil~aL~~LH~~-gIiHrDIKP~NIll~~~g~vkL~DFG~ 817 (931)
+..|+||||+. ++|.+++.. .....+++..+..++.|++.||.|||++ ||+||||||+|||++.++.+||+|||+
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 172 (327)
T 3aln_A 94 GDCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGI 172 (327)
T ss_dssp SEEEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSS
T ss_pred CceEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCC
Confidence 99999999996 588877763 2235699999999999999999999999 999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhh----cCCCCCChhhHHHHHHHHHHHHc
Q 002356 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII----AGAGHTSAVDWWALGILLYEMLY 893 (931)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~----~~~~~~~~~DiwSlGvil~ell~ 893 (931)
+...... .......||+.|+|||++ .+..++.++|||||||++|+|++
T Consensus 173 ~~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~ 224 (327)
T 3aln_A 173 SGQLVDS----------------------------IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELAT 224 (327)
T ss_dssp SCC----------------------------------------------------------CCSHHHHHHHHHHHHHHHH
T ss_pred ceecccc----------------------------cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHH
Confidence 8543211 011233699999999998 45678899999999999999999
Q ss_pred CCCCCCCCC
Q 002356 894 GYTPFRGKT 902 (931)
Q Consensus 894 G~~Pf~~~~ 902 (931)
|+.||.+.+
T Consensus 225 g~~pf~~~~ 233 (327)
T 3aln_A 225 GRFPYPKWN 233 (327)
T ss_dssp SCCCSSCC-
T ss_pred CCCCCCCcc
Confidence 999998643
No 240
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=5.1e-32 Score=301.83 Aligned_cols=199 Identities=26% Similarity=0.391 Sum_probs=165.0
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc--CCCCccceeEEEEeC----
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML--DHPFVPALYASFQTK---- 741 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l--~hpnIv~l~~~~~~~---- 741 (931)
.++|++.+.||+|+||.||++.+ +++.||+|++... .......|.+++..+ +||||+++++++...
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 36 AKQIQMVKQIGKGRYGEVWMGKW--RGEKVAVKVFFTT------EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccceEEEeEeecCCCeEEEEEEE--CCceEEEEEEecc------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 46899999999999999999988 4899999998643 223445566666554 899999999999877
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCccCCCCCCcEEEecCCcEEEE
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------GIIYRDLKPENVLLQGNGHVSLT 813 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~--------gIiHrDIKP~NIll~~~g~vkL~ 813 (931)
..+|+||||+++++|.+++... .+++..++.++.|++.||.|||++ ||+||||||+|||++.++.+||+
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~ 184 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred CceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence 7899999999999999999764 489999999999999999999999 99999999999999999999999
Q ss_pred eccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCCh------hhHHHHHHH
Q 002356 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA------VDWWALGIL 887 (931)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~------~DiwSlGvi 887 (931)
|||++......... .........||+.|+|||++.+..+... +|||||||+
T Consensus 185 Dfg~a~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~i 241 (337)
T 3mdy_A 185 DLGLAVKFISDTNE-----------------------VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLI 241 (337)
T ss_dssp CCTTCEECC--------------------------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHH
T ss_pred eCCCceeecccccc-----------------------ccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHH
Confidence 99999654321110 0011235579999999999987766654 999999999
Q ss_pred HHHHHcC----------CCCCCC
Q 002356 888 LYEMLYG----------YTPFRG 900 (931)
Q Consensus 888 l~ell~G----------~~Pf~~ 900 (931)
+|+|++| ..||..
T Consensus 242 l~el~tg~~~~~~~~~~~~p~~~ 264 (337)
T 3mdy_A 242 LWEVARRCVSGGIVEEYQLPYHD 264 (337)
T ss_dssp HHHHHTTBCBTTBCCCCCCTTTT
T ss_pred HHHHHhccCcccccccccccHhh
Confidence 9999999 778764
No 241
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.98 E-value=6.2e-32 Score=294.90 Aligned_cols=184 Identities=16% Similarity=0.157 Sum_probs=162.9
Q ss_pred cccccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe
Q 002356 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (931)
Q Consensus 661 ~~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (931)
..+..+..++|++.+.||+|+||.||++.+..+++.||+|++.............+.+|+.++..++||||+++++++..
T Consensus 23 ~~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~ 102 (286)
T 3uqc_A 23 VPGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT 102 (286)
T ss_dssp CTTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred CCCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE
Confidence 34554666899999999999999999999999999999999987665556677889999999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
.+..|+||||++|++|.+++... .....+..++.||+.||.|||++||+||||||+|||++.+|.+||++++.
T Consensus 103 ~~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~--- 175 (286)
T 3uqc_A 103 RAGGLVVAEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPAT--- 175 (286)
T ss_dssp TTEEEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCC---
T ss_pred CCcEEEEEEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccc---
Confidence 99999999999999999999542 45567888999999999999999999999999999999999999985442
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
++ .++.++|||||||++|+|++|+.||.+
T Consensus 176 --------------------------------------------~~-------~~~~~~Di~slG~il~elltg~~Pf~~ 204 (286)
T 3uqc_A 176 --------------------------------------------MP-------DANPQDDIRGIGASLYALLVNRWPLPE 204 (286)
T ss_dssp --------------------------------------------CT-------TCCHHHHHHHHHHHHHHHHHSEECSCC
T ss_pred --------------------------------------------cC-------CCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 22 267899999999999999999999987
Q ss_pred CC
Q 002356 901 KT 902 (931)
Q Consensus 901 ~~ 902 (931)
.+
T Consensus 205 ~~ 206 (286)
T 3uqc_A 205 AG 206 (286)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 242
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.98 E-value=1.5e-32 Score=306.24 Aligned_cols=206 Identities=26% Similarity=0.398 Sum_probs=162.8
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHH--HHhcCCCCccceeEEEEe-
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI--LDMLDHPFVPALYASFQT- 740 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~i--l~~l~hpnIv~l~~~~~~- 740 (931)
..+..++|++.+.||+|+||.||++.+ +++.||+|++.... ...+..|.++ +..++||||+++++.+..
T Consensus 8 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~ 79 (336)
T 3g2f_A 8 PSLDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN------RQNFINEKNIYRVPLMEHDNIARFIVGDERV 79 (336)
T ss_dssp -CCCTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEE
T ss_pred CCcChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc------hhhHHHHHHHHHHHhccCcchhhheeccccc
Confidence 346788999999999999999999976 78999999987542 2334445555 445899999999986542
Q ss_pred ----CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCccCCCCCCcEEEecC
Q 002356 741 ----KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---------GIIYRDLKPENVLLQGN 807 (931)
Q Consensus 741 ----~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---------gIiHrDIKP~NIll~~~ 807 (931)
...+|+|||||++|+|.+++.... ++...+..++.||+.||.|||++ ||+||||||+|||++.+
T Consensus 80 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~ 156 (336)
T 3g2f_A 80 TADGRMEYLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKND 156 (336)
T ss_dssp CTTSCEEEEEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTT
T ss_pred ccCCCceEEEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCC
Confidence 346799999999999999997643 58899999999999999999999 99999999999999999
Q ss_pred CcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-------CCCCChhh
Q 002356 808 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVD 880 (931)
Q Consensus 808 g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-------~~~~~~~D 880 (931)
+.+||+|||++.......... ............||+.|+|||++.+ ..++.++|
T Consensus 157 ~~~kL~DFG~a~~~~~~~~~~-------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~D 217 (336)
T 3g2f_A 157 GTCVISDFGLSMRLTGNRLVR-------------------PGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVD 217 (336)
T ss_dssp SCEEECCCTTCEECSSSSCC----------------------------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHH
T ss_pred CcEEEeeccceeecccccccC-------------------ccccccccccCCCccceeCchhhcCCcccccccccccccc
Confidence 999999999997653211100 0001122335579999999999987 34556899
Q ss_pred HHHHHHHHHHHHcCCCCCC
Q 002356 881 WWALGILLYEMLYGYTPFR 899 (931)
Q Consensus 881 iwSlGvil~ell~G~~Pf~ 899 (931)
||||||++|+|++|..||.
T Consensus 218 iwslG~il~ell~g~~p~~ 236 (336)
T 3g2f_A 218 MYALGLIYWEIFMRCTDLF 236 (336)
T ss_dssp HHHHHHHHHHHHTTBGGGS
T ss_pred hHHHHHHHHHHHhcCCcCC
Confidence 9999999999999966653
No 243
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.97 E-value=1.3e-31 Score=299.23 Aligned_cols=213 Identities=23% Similarity=0.346 Sum_probs=175.5
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHh--cCCCCccceeEEEEeCC---
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQTKT--- 742 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~--l~hpnIv~l~~~~~~~~--- 742 (931)
.++|++.+.||+|+||.||++.+ +++.||+|++... ....+.+|.++++. ++||||+++++++....
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 41 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred cccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 46899999999999999999998 6899999998653 23567789999988 68999999999998765
Q ss_pred -eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCccCCCCCCcEEEecCCcEEEE
Q 002356 743 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH--------CQGIIYRDLKPENVLLQGNGHVSLT 813 (931)
Q Consensus 743 -~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH--------~~gIiHrDIKP~NIll~~~g~vkL~ 813 (931)
..|+||||+++++|.+++... .+++..++.++.||+.||.||| ++||+||||||+|||++.++.+||+
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 189 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 189 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEEC
T ss_pred ceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEE
Confidence 899999999999999999764 4899999999999999999999 8999999999999999999999999
Q ss_pred eccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC------CCChhhHHHHHHH
Q 002356 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG------HTSAVDWWALGIL 887 (931)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~------~~~~~DiwSlGvi 887 (931)
|||++......... .........||+.|+|||++.+.. ++.++|||||||+
T Consensus 190 Dfg~~~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~i 246 (342)
T 1b6c_B 190 DLGLAVRHDSATDT-----------------------IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 246 (342)
T ss_dssp CCTTCEEEETTTTE-----------------------EEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHH
T ss_pred ECCCceeccccccc-----------------------cccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHH
Confidence 99998654311100 001123457999999999997753 2358999999999
Q ss_pred HHHHHcC----------CCCCCCC-----CHHHHHHHHHcCC
Q 002356 888 LYEMLYG----------YTPFRGK-----TRQKTFANILHKD 914 (931)
Q Consensus 888 l~ell~G----------~~Pf~~~-----~~~~~~~~I~~~~ 914 (931)
+|+|++| ..||... ....+...+..+.
T Consensus 247 l~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 288 (342)
T 1b6c_B 247 FWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK 288 (342)
T ss_dssp HHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC
T ss_pred HHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHH
Confidence 9999999 8899764 3345555555443
No 244
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=3.2e-33 Score=312.16 Aligned_cols=197 Identities=17% Similarity=0.178 Sum_probs=164.5
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeeccccc-----ChHHHHHHHHHHHHHHhcC---------CCCc
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NRNKVHRACAEREILDMLD---------HPFV 731 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~-----~~~~~~~~~~E~~il~~l~---------hpnI 731 (931)
+..++|++.+.||+|+||.||+|.+ +++.||||++.+.... .......+.+|+.+|+.++ ||||
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~ni 94 (336)
T 2vuw_A 17 LPTEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGF 94 (336)
T ss_dssp SCHHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCB
T ss_pred cccccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCch
Confidence 4567899999999999999999998 7899999999875321 2334467889999998885 7777
Q ss_pred cceeEEEE------------------------------eCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHH
Q 002356 732 PALYASFQ------------------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVV 781 (931)
Q Consensus 732 v~l~~~~~------------------------------~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil 781 (931)
+++++++. ....+|+|||||.+|++.+.+.. ..+++..++.++.||+
T Consensus 95 v~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 95 IGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLT 171 (336)
T ss_dssp CCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHH
T ss_pred hhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHH
Confidence 77766543 26889999999999977666643 4589999999999999
Q ss_pred HHHHHHH-HCCCccCCCCCCcEEEecCC--------------------cEEEEeccCCcccCCCCCCCCCcchhhhhccc
Q 002356 782 VALEYLH-CQGIIYRDLKPENVLLQGNG--------------------HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 840 (931)
Q Consensus 782 ~aL~~LH-~~gIiHrDIKP~NIll~~~g--------------------~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 840 (931)
.||.||| ++||+||||||+|||++.++ .+||+|||+|+...
T Consensus 172 ~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~------------------ 233 (336)
T 2vuw_A 172 ASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLER------------------ 233 (336)
T ss_dssp HHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEE------------------
T ss_pred HHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecC------------------
Confidence 9999999 99999999999999999887 89999999996432
Q ss_pred CCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHH-HHHHHcCCCCCCC
Q 002356 841 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL-LYEMLYGYTPFRG 900 (931)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvi-l~ell~G~~Pf~~ 900 (931)
....+||+.|+|||++.+.. +.++||||||++ .++++.|..||.+
T Consensus 234 --------------~~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~ 279 (336)
T 2vuw_A 234 --------------DGIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN 279 (336)
T ss_dssp --------------TTEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH
T ss_pred --------------CCcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc
Confidence 11347999999999998776 889999998877 7778889999954
No 245
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.97 E-value=2.2e-31 Score=308.05 Aligned_cols=220 Identities=25% Similarity=0.311 Sum_probs=167.0
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~l 746 (931)
.+.|.+.+.||+|+||+||.+ ...+++.||||.+... ..+.+.+|+.+|+.+ +||||+++++++.....+|+
T Consensus 14 ~~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~l 86 (434)
T 2rio_A 14 KNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLID------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYI 86 (434)
T ss_dssp SSCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGG------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred hheeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHH------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEE
Confidence 456677789999999999875 4467999999998653 234567899999876 89999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCC-----CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC-------------C
Q 002356 747 ITDYCPGGELFLLLDRQPTKV-----LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-------------G 808 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~-----l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~-------------g 808 (931)
||||| +|+|.+++....... .++..++.++.||+.||.|||++||+||||||+|||++.+ +
T Consensus 87 v~E~~-~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~ 165 (434)
T 2rio_A 87 ALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENL 165 (434)
T ss_dssp EECCC-SEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSC
T ss_pred EEecC-CCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCce
Confidence 99999 569999998643211 1233457799999999999999999999999999999754 4
Q ss_pred cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-------CCCCChhhH
Q 002356 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVDW 881 (931)
Q Consensus 809 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-------~~~~~~~Di 881 (931)
.+||+|||++......... .........||+.|+|||++.+ ..++.++||
T Consensus 166 ~~kL~DFG~a~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~Di 222 (434)
T 2rio_A 166 RILISDFGLCKKLDSGQSS-----------------------FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDI 222 (434)
T ss_dssp EEEECCCTTCEECCC-------------------------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHH
T ss_pred EEEEcccccceecCCCCcc-----------------------ceeeecCCCCCCCccCHHHhccccccccccCcchhhhh
Confidence 8999999999654321100 0011234579999999999976 568889999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCCCCCCC
Q 002356 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSS 920 (931)
Q Consensus 882 wSlGvil~ell~-G~~Pf~~~~~~~~~~~I~~~~~~~p~~ 920 (931)
|||||++|+|++ |..||.+....+ ..++.+.+.++..
T Consensus 223 wSlG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~~~ 260 (434)
T 2rio_A 223 FSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEM 260 (434)
T ss_dssp HHHHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCCCC
T ss_pred HhHHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCCcccc
Confidence 999999999998 999998665433 4566666655543
No 246
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.97 E-value=2.8e-33 Score=306.96 Aligned_cols=198 Identities=25% Similarity=0.384 Sum_probs=152.8
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHh--cCCCCccceeEEEEeCC----
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQTKT---- 742 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~--l~hpnIv~l~~~~~~~~---- 742 (931)
++|++.+.||+|+||.||++.+ +++.||+|++... ....+.+|.+++.. ++||||+++++++....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 74 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C--TTSCEEEEECC-T------THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSE
T ss_pred ceeeehhhccCCCCeEEEEEEE--cCcceEEEEeccc------chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccc
Confidence 5899999999999999999987 5889999998653 23556778888877 79999999999998766
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCccCCCCCCcEEEecCCcEEEEe
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH--------CQGIIYRDLKPENVLLQGNGHVSLTD 814 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH--------~~gIiHrDIKP~NIll~~~g~vkL~D 814 (931)
.+|+||||+.+|+|.+++... .++...++.++.|++.||.||| ++||+||||||+|||++.++.+||+|
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 151 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred eeEEEEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEee
Confidence 889999999999999999764 3788889999999999999999 99999999999999999999999999
Q ss_pred ccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC------CCCChhhHHHHHHHH
Q 002356 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA------GHTSAVDWWALGILL 888 (931)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~------~~~~~~DiwSlGvil 888 (931)
||++......... .........||+.|+|||++.+. .++.++|||||||++
T Consensus 152 Fg~a~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il 208 (303)
T 3gxj_A 152 LGLAVRHDSATDT-----------------------IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 208 (303)
T ss_dssp CCC-CCEETTTTE-----------------------ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC
T ss_pred cCcceeccCCCcc-----------------------cccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHH
Confidence 9998654311110 00112345799999999999776 333589999999999
Q ss_pred HHHHcC----------CCCCCC
Q 002356 889 YEMLYG----------YTPFRG 900 (931)
Q Consensus 889 ~ell~G----------~~Pf~~ 900 (931)
|+|++| ..||..
T Consensus 209 ~el~~g~~~~~~~~~~~~p~~~ 230 (303)
T 3gxj_A 209 WEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp -CTGGGBCBTTBC-CCCCTTTT
T ss_pred HHHHhcCCCccccceeeccccc
Confidence 999999 788864
No 247
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.97 E-value=2.7e-31 Score=306.83 Aligned_cols=206 Identities=22% Similarity=0.340 Sum_probs=162.2
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 744 (931)
+...+|.+.+.||+|+||.||. ....+++.||||.+.+... ....+|+.+|+.+ +||||+++++++......
T Consensus 21 i~~~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~ 93 (432)
T 3p23_A 21 VGKISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQ 93 (432)
T ss_dssp ETTEEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEE
T ss_pred EccEEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEE
Confidence 4455799999999999999764 3456889999999875432 2245799999999 799999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec---CC--cEEEEeccCCc
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NG--HVSLTDFDLSC 819 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~---~g--~vkL~DFG~a~ 819 (931)
|+||||| +|+|.+++.... ..++...++.++.||+.||.|||++||+||||||+|||++. ++ .+||+|||++.
T Consensus 94 ~lv~E~~-~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~ 171 (432)
T 3p23_A 94 YIAIELC-AATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171 (432)
T ss_dssp EEEEECC-SEEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEE
T ss_pred EEEEECC-CCCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEeccccee
Confidence 9999999 569999998653 23555567789999999999999999999999999999953 23 58899999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc---CCCCCChhhHHHHHHHHHHHHc-CC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLY-GY 895 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~ell~-G~ 895 (931)
....... .........||+.|+|||++. ...++.++|||||||++|+|++ |.
T Consensus 172 ~~~~~~~------------------------~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~ 227 (432)
T 3p23_A 172 KLAVGRH------------------------SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGS 227 (432)
T ss_dssp CC------------------------------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSC
T ss_pred eccCCCc------------------------ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCC
Confidence 5431100 011223467999999999997 4567789999999999999999 99
Q ss_pred CCCCCCCHH
Q 002356 896 TPFRGKTRQ 904 (931)
Q Consensus 896 ~Pf~~~~~~ 904 (931)
+||......
T Consensus 228 ~pf~~~~~~ 236 (432)
T 3p23_A 228 HPFGKSLQR 236 (432)
T ss_dssp BTTBSTTTH
T ss_pred CCcchhhHH
Confidence 999765443
No 248
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.97 E-value=1.2e-31 Score=320.27 Aligned_cols=205 Identities=31% Similarity=0.473 Sum_probs=176.1
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe------C
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------K 741 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~ 741 (931)
.++|++.+.||+|+||.||++.+..+++.||+|++... ........+.+|+.+|+.++||||+++++++.. .
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~--~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC--CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc--CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 47899999999999999999999999999999998754 244556788999999999999999999998755 6
Q ss_pred CeEEEEEeccCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc---EEEEeccC
Q 002356 742 THVCLITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDL 817 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~---vkL~DFG~ 817 (931)
+..|+|||||+|++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++.++. +||+|||+
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 78899999999999999998643 235899999999999999999999999999999999999997764 99999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCC
Q 002356 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~P 897 (931)
+...... .......||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 171 a~~~~~~----------------------------~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~P 222 (676)
T 3qa8_A 171 AKELDQG----------------------------ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222 (676)
T ss_dssp CCBTTSC----------------------------CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSS
T ss_pred ccccccc----------------------------cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCC
Confidence 9654211 112345799999999999999999999999999999999999999
Q ss_pred CCCCC
Q 002356 898 FRGKT 902 (931)
Q Consensus 898 f~~~~ 902 (931)
|.+..
T Consensus 223 f~~~~ 227 (676)
T 3qa8_A 223 FLPNW 227 (676)
T ss_dssp CCSSC
T ss_pred CCccc
Confidence 97654
No 249
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=2.1e-31 Score=325.64 Aligned_cols=196 Identities=24% Similarity=0.349 Sum_probs=168.2
Q ss_pred ccCCCccccccccccCcEEEEEEEEec-CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe-
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH- 743 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~-~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~- 743 (931)
+..++|++.+.||+|+||.||++.+.. +++.||||++... ........+.+|+.+|+.++||||+++++++...+.
T Consensus 77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 154 (681)
T 2pzi_A 77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS--GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRH 154 (681)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS--CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTT
T ss_pred EeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc--CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCC
Confidence 345899999999999999999999976 7899999998653 234556678899999999999999999999987655
Q ss_pred ----EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 744 ----VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 744 ----~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
.||||||++|++|.+++.. .+++..++.++.||+.||.|||++||+||||||+|||++. +.+||+|||++.
T Consensus 155 ~~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~-~~~kl~DFG~a~ 229 (681)
T 2pzi_A 155 GDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE-EQLKLIDLGAVS 229 (681)
T ss_dssp SCEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECS-SCEEECCCTTCE
T ss_pred CCceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeC-CcEEEEecccch
Confidence 7999999999999987754 4999999999999999999999999999999999999986 499999999985
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~ 899 (931)
.... .....||+.|+|||++.+. ++.++|||||||+||+|++|.+||.
T Consensus 230 ~~~~-------------------------------~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~ 277 (681)
T 2pzi_A 230 RINS-------------------------------FGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRN 277 (681)
T ss_dssp ETTC-------------------------------CSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEET
T ss_pred hccc-------------------------------CCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCc
Confidence 4321 1345799999999999765 4889999999999999999999986
Q ss_pred C
Q 002356 900 G 900 (931)
Q Consensus 900 ~ 900 (931)
+
T Consensus 278 ~ 278 (681)
T 2pzi_A 278 G 278 (681)
T ss_dssp T
T ss_pred c
Confidence 4
No 250
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.97 E-value=5.9e-31 Score=288.79 Aligned_cols=180 Identities=26% Similarity=0.470 Sum_probs=155.9
Q ss_pred CCCcccc-ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHH-HhcCCCCccceeEEEEe----C
Q 002356 668 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL-DMLDHPFVPALYASFQT----K 741 (931)
Q Consensus 668 ~~~y~i~-~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il-~~l~hpnIv~l~~~~~~----~ 741 (931)
.++|.+. +.||+|+||.||++.+..+++.||+|++... ....+|+.++ +.++||||+++++++.. .
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 87 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 87 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCC
Confidence 4678888 7899999999999999999999999998643 3466788887 66699999999999987 7
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec---CCcEEEEeccCC
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLS 818 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~---~g~vkL~DFG~a 818 (931)
..+|+||||++|++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 88 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred ceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 78999999999999999998876567999999999999999999999999999999999999998 788999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
.... +..++.++|||||||++|+|++|..||
T Consensus 168 ~~~~-------------------------------------------------~~~~~~~~DiwslG~il~el~tg~~pf 198 (299)
T 3m2w_A 168 KETT-------------------------------------------------GEKYDKSCDMWSLGVIMYILLCGYPPF 198 (299)
T ss_dssp EECT-------------------------------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSC
T ss_pred cccc-------------------------------------------------cccCCchhhHHHHHHHHHHHHHCCCCC
Confidence 4321 133567899999999999999999999
Q ss_pred CCCCHH
Q 002356 899 RGKTRQ 904 (931)
Q Consensus 899 ~~~~~~ 904 (931)
.+.+..
T Consensus 199 ~~~~~~ 204 (299)
T 3m2w_A 199 YSNHGL 204 (299)
T ss_dssp CC----
T ss_pred CCCcch
Confidence 765443
No 251
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97 E-value=9.9e-32 Score=308.93 Aligned_cols=213 Identities=18% Similarity=0.150 Sum_probs=163.8
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCC-CCc---------ccee--
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH-PFV---------PALY-- 735 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~h-pnI---------v~l~-- 735 (931)
...|.+.+.||+|+||.||++.+..+++.||||++...........+.+.+|+.+++.+.| .|. +..+
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 3468889999999999999999999999999999875443333446778899999999976 221 1111
Q ss_pred ----------EEEEe-----CCeEEEEEeccCCCCHHHHHh-----hCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q 002356 736 ----------ASFQT-----KTHVCLITDYCPGGELFLLLD-----RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYR 795 (931)
Q Consensus 736 ----------~~~~~-----~~~~~lVmE~~~ggsL~~~l~-----~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHr 795 (931)
.++.. ...++++|+++ +++|.+++. ......+++..+..++.||+.||.|||++||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHr 235 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 235 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 11111 23467888877 889999985 2223457888999999999999999999999999
Q ss_pred CCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhh-----
Q 002356 796 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII----- 870 (931)
Q Consensus 796 DIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~----- 870 (931)
||||+|||++.++.+||+|||+++.... .....+| +.|+|||++
T Consensus 236 DiKp~NILl~~~~~~kL~DFG~a~~~~~------------------------------~~~~~~g-~~y~aPE~~~~~~~ 284 (413)
T 3dzo_A 236 YLRPVDIVLDQRGGVFLTGFEHLVRDGA------------------------------SAVSPIG-RGFAPPETTAERML 284 (413)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTE------------------------------EECCCCC-TTTCCHHHHHHHTS
T ss_pred CcccceEEEecCCeEEEEeccceeecCC------------------------------ccccCCC-CceeCchhhhcccc
Confidence 9999999999999999999999854321 1234568 999999999
Q ss_pred -----cCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc
Q 002356 871 -----AGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 912 (931)
Q Consensus 871 -----~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~ 912 (931)
....++.++|||||||++|+|++|+.||.+.+..+.+..+..
T Consensus 285 ~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~ 331 (413)
T 3dzo_A 285 PFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFR 331 (413)
T ss_dssp TTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGS
T ss_pred ccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHHh
Confidence 555678899999999999999999999987655444444433
No 252
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.3e-29 Score=301.78 Aligned_cols=187 Identities=16% Similarity=0.117 Sum_probs=133.7
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeeccccc-------ChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEEE
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-------NRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~-------~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~l 746 (931)
..++.|++|.+..++....|..||||++.+.... .......+.+|+++|+++ .|+||++++++++++..+||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 3467788888888888888999999999765321 123456788999999999 79999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
|||||+|++|.+++... ..+++. .|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+.....
T Consensus 320 VMEyv~G~~L~d~i~~~--~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~-- 392 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAG--EEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD-- 392 (569)
T ss_dssp EEECCCSEEHHHHHHTT--CCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC----
T ss_pred EEecCCCCcHHHHHHhC--CCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCC--
Confidence 99999999999999875 346654 47899999999999999999999999999999999999999998654211
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcC
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYG 894 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G 894 (931)
.....+.+||+.|||||++.+. +..++|+||+|+++|+|.+|
T Consensus 393 -------------------------~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~ 434 (569)
T 4azs_A 393 -------------------------CSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQP 434 (569)
T ss_dssp --------------------------CCSHHHHHHHHHHHHHHC------------------CCCCTT
T ss_pred -------------------------CccccCceechhhccHHHhCCC-CCCcccccccccchhhhccc
Confidence 1223467899999999999764 66789999999988776544
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=5.7e-25 Score=260.41 Aligned_cols=194 Identities=16% Similarity=0.164 Sum_probs=146.2
Q ss_pred cccccccccCcEEEEEEEEecCCeEEEEEEeecccccCh-----HHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-----NKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 672 ~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
...+.||+|+||.||++. ..++.+++|.......... ...+++.+|+++|++++||||+++..++...+..||
T Consensus 339 ~~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 416 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI 416 (540)
T ss_dssp ---------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred CCCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence 445689999999999994 4678899998654322221 224567899999999999999966656667777899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
|||||+|++|.+++.. +..++.||+.||.|||++||+||||||+|||++. .+||+|||+++.......
T Consensus 417 VmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 417 MMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp EEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred EEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence 9999999999999865 4678999999999999999999999999999997 999999999966431100
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC--CCCCChhhHHHHHHHHHHHHcCCCCCC
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFR 899 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~ell~G~~Pf~ 899 (931)
.. .+......++.||+.|||||++.. ..|+..+|+||..+-..+-+.++.+|.
T Consensus 485 --------~~------------~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 485 --------KA------------VDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp --------HH------------HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred --------cc------------cchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 00 000011236789999999999976 567778999999999999888877774
No 254
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=1.6e-22 Score=219.75 Aligned_cols=136 Identities=17% Similarity=0.106 Sum_probs=110.0
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccCh---------------HHHHHHHHHHHHHHhcCCCCccc
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---------------NKVHRACAEREILDMLDHPFVPA 733 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~---------------~~~~~~~~E~~il~~l~hpnIv~ 733 (931)
..|.+.+.||+|+||.||+|.+ .+++.||+|++........ .....+.+|+.+|+.++ | +.
T Consensus 90 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~ 165 (282)
T 1zar_A 90 KVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LA 165 (282)
T ss_dssp SCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SS
T ss_pred eEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CC
Confidence 3466669999999999999999 8899999999965422111 23567889999999998 4 55
Q ss_pred eeEEEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEE
Q 002356 734 LYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLT 813 (931)
Q Consensus 734 l~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~ 813 (931)
+++++.. +..|+|||||+|++|.+ +.. .....++.||+.||.|||++||+||||||+|||++ +|.+||+
T Consensus 166 v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~ 234 (282)
T 1zar_A 166 VPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWII 234 (282)
T ss_dssp SCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEEC
T ss_pred cCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEE
Confidence 5555544 45699999999999988 421 23457999999999999999999999999999999 9999999
Q ss_pred eccCCc
Q 002356 814 DFDLSC 819 (931)
Q Consensus 814 DFG~a~ 819 (931)
|||+|+
T Consensus 235 DFG~a~ 240 (282)
T 1zar_A 235 DFPQSV 240 (282)
T ss_dssp CCTTCE
T ss_pred ECCCCe
Confidence 999983
No 255
>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.80 E-value=2.9e-19 Score=200.86 Aligned_cols=107 Identities=11% Similarity=0.010 Sum_probs=98.6
Q ss_pred cceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCcEEE
Q 002356 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFW 561 (931)
Q Consensus 482 ~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~w 561 (931)
.+.++..|.+|. |+|+|++++.++||+++|++|+++..++||++.......++..+..+.....+++++++||..+|
T Consensus 251 ~~f~~~~~~dg~---~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~g~~~~~eyR~~~kdG~~vW 327 (361)
T 4f3l_A 251 EEFTSRHSLEWK---FLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIW 327 (361)
T ss_dssp CEEEEEECTTSB---EEEECTTSHHHHCCCHHHHTTSBGGGGBCHHHHHHHHHHHHHHHHHSEEECCCEEEECTTSEEEE
T ss_pred ceeEEEEcCCce---EEEECChhhhhhCcCHHHHcCCCHHHeECHHHHHHHHHHHHHHHhCCCcceEEEEEEecCCCEEE
Confidence 466788888888 99999999999999999999999999999999888888888888888777889999999999999
Q ss_pred EEEEEEeeecC-CCCEEEEEEEEecCCcccc
Q 002356 562 NLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (931)
Q Consensus 562 v~~~~~pi~d~-~G~~~~~vgi~rDITerk~ 591 (931)
+..+..|++|. .|++.+++|+.+|||+++.
T Consensus 328 v~~~~~~v~~~~~g~~~~iv~~~~dITe~~~ 358 (361)
T 4f3l_A 328 LQTHYYITYHQWNSRPEFIVCTHTVVSYAEV 358 (361)
T ss_dssp EEEEEEEEECTTTCCEEEEEEEEEECCHHHH
T ss_pred EEEEEEEEEcCCCCCeeEEEEEEEECChhHh
Confidence 99999999998 7999999999999999876
No 256
>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.78 E-value=7.7e-19 Score=199.05 Aligned_cols=108 Identities=12% Similarity=0.062 Sum_probs=93.8
Q ss_pred ccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCc-EEEEEEEEecCCcE
Q 002356 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-VTVQLINYTKSGKK 559 (931)
Q Consensus 481 ~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~-~~~e~~~~~kdG~~ 559 (931)
..+.++..|.+|. |+|+|++++.++||+++|++|+++..++||++.....+.+...+..+.. ...+++++++||+.
T Consensus 277 ~~~fi~~~~~dg~---~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~~~~~~~~eyR~~~kdG~~ 353 (387)
T 4f3l_B 277 SMEYVSRHAIDGK---FVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 353 (387)
T ss_dssp CCEEEEEECTTSB---EEEECTHHHHHHCCCHHHHTTSBGGGTBCHHHHHHHHHHHHHHTTCSSCEECCCEEEECTTSCE
T ss_pred CceEEEEECCCCE---EEEECCCcccccCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhcCCCeeeEEEEEEccCCCE
Confidence 4577888999888 9999999999999999999999999999999988888888777766554 56799999999999
Q ss_pred EEEEEEEEeeecC-CCCEEEEEEEEecCCcccc
Q 002356 560 FWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (931)
Q Consensus 560 ~wv~~~~~pi~d~-~G~~~~~vgi~rDITerk~ 591 (931)
+|+..+..+++|. .|++.+++|+.+|||+||+
T Consensus 354 vWv~~~~~~~~~~~~g~~~~ivg~~~dIT~Rk~ 386 (387)
T 4f3l_B 354 ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVL 386 (387)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEECC----
T ss_pred EEEEEEEEEEECCCCCCEEEEEEEEEEcchhhc
Confidence 9999999999997 7899999999999999985
No 257
>2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii}
Probab=99.77 E-value=4.5e-18 Score=158.58 Aligned_cols=119 Identities=26% Similarity=0.460 Sum_probs=109.2
Q ss_pred chHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEE
Q 002356 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (931)
Q Consensus 186 ~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~ 265 (931)
++++.|+.++++++++|+++|. +|+|+|+|++|++++||+.+|++|+++..+.++.........++..+..+..+.+
T Consensus 2 ~~~~~~~~~~~~~~~~i~~~d~---~g~i~~~N~a~~~~~G~~~~elig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (120)
T 2gj3_A 2 LLPEIFRQTVEHAPIAISITDL---KANILYANRAFRTITGYGSEEVLGKNESILSNGTTPRLVYQALWGRLAQKKPWSG 78 (120)
T ss_dssp CCHHHHHHHHHHCSSEEEEECT---TCBEEEECHHHHHHHCCCTTGGGGCBGGGGCCTTSCHHHHHHHHHHHHTTCCEEE
T ss_pred hhHHHHHHHHHhCCCeEEEECC---CCCEEeehHHHHHHHCcCHHHHcCCCHHHcCCCCCCHHHHHHHHHHHHcCCCEEE
Confidence 3457899999999999999998 7889999999999999999999999988787777776677788888999999999
Q ss_pred EEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhh
Q 002356 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHT 307 (931)
Q Consensus 266 e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk 307 (931)
++..+++||+.+|+.+++.|++|.+|.+.+++++++|||++|
T Consensus 79 e~~~~~~dG~~~~~~~~~~pi~~~~g~~~~~v~~~~DITe~k 120 (120)
T 2gj3_A 79 VLVNRRKDKTLYLAELTVAPVLNEAGETIYYLGMHRDTSELH 120 (120)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCSCC
T ss_pred EEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEeccCcccC
Confidence 999999999999999999999999999999999999999975
No 258
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=9.4e-19 Score=187.52 Aligned_cols=140 Identities=18% Similarity=0.107 Sum_probs=109.1
Q ss_pred CccccccccccCcEEEEEEEEecCCeE--EEEEEeecccccCh---------------------HHHHHHHHHHHHHHhc
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQY--FAMKAMDKGVMLNR---------------------NKVHRACAEREILDML 726 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~--~AvK~~~~~~~~~~---------------------~~~~~~~~E~~il~~l 726 (931)
-|.+.+.||+|+||.||++.+..+|+. ||||++........ .....+.+|+.+|+.+
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 378899999999999999999788999 99999765321100 1123577899999999
Q ss_pred CCCCc--cceeEEEEeCCeEEEEEeccCC-C----CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCccCCCC
Q 002356 727 DHPFV--PALYASFQTKTHVCLITDYCPG-G----ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH-CQGIIYRDLK 798 (931)
Q Consensus 727 ~hpnI--v~l~~~~~~~~~~~lVmE~~~g-g----sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH-~~gIiHrDIK 798 (931)
.|+++ +.++++ ...+|||||+.+ | +|.++... .++..+..++.||+.+|.||| ++||+|||||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~givHrDlk 198 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAELVHADLS 198 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCS
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCC
Confidence 88754 444432 356899999932 3 77766432 234567889999999999999 9999999999
Q ss_pred CCcEEEecCCcEEEEeccCCcc
Q 002356 799 PENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 799 P~NIll~~~g~vkL~DFG~a~~ 820 (931)
|+|||++. .++|+|||+|..
T Consensus 199 p~NILl~~--~~~liDFG~a~~ 218 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVT 218 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEE
T ss_pred HHHEEEcC--cEEEEECccccc
Confidence 99999997 999999999854
No 259
>3ewk_A Sensor protein; PAS domain, alpha/beta fold, kinase, phosphoprotein, transfe flavoprotein; HET: FAD; 2.34A {Methylococcus capsulatus}
Probab=99.74 E-value=1.3e-17 Score=174.71 Aligned_cols=162 Identities=23% Similarity=0.442 Sum_probs=139.4
Q ss_pred hceeecccCCCCCcceeEeccCCCCCCCCCCCccCCCCCcceEEEecccccccccccccchHHHHHHHHHhcCCcEEEEe
Q 002356 127 WGLVLKTDTETGKPQAVVARTSGGDDPNGKPGTSRRNSNNSVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSD 206 (931)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~dit~~~~~e~~l~~~~~~~~~ile~~~~~i~v~D 206 (931)
|...++..+..|...|+........+.+|.+. +.+++..|||++|++|++|+ .++.++++++++|+++|
T Consensus 60 ~~~e~~~~~~dG~~~~~~~~~~p~~d~~g~~~-------~~~~~~~DIT~~k~~e~~l~----~~~~~~~~~~~~i~~~d 128 (227)
T 3ewk_A 60 WQGEFCNRRKDGTRYWVDSTIVPLMDNAGKPR-------QYISIRRDITAQKEAEAQLA----RLKQAMDANSEMILLTD 128 (227)
T ss_dssp EEEEEEEECSSSCEEEEEEEEEEEECSSSCEE-------EEEEEEEECTTTTHHHHHHH----HHHHHHHTCCSEEEEEC
T ss_pred EEEEEEEEcCCCCEEeeeeEEEEEEcCCCCEE-------EEEEEEEehhhHHHHHHHHH----HHHHHHhcCcCeEEEEc
Confidence 33455556778888888776665555555433 36677799999999888774 46778999999999999
Q ss_pred CCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCc------EEEEE
Q 002356 207 ATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGT------PFWNL 280 (931)
Q Consensus 207 ~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~------~~w~~ 280 (931)
. +|+|+++|++|++++||+.+|++|+++..+.++.........++..+..+..|.+++..++|||. .+|++
T Consensus 129 ~---~g~i~~~N~~~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~k~G~~~~dg~~~~~~ 205 (227)
T 3ewk_A 129 R---AGRIIYANPALCRFSGMAEGELLGQSPSILDSPLADQETLAAMQEALQAGQPWSGRLLNRRRTGPAPHDAEDYWAE 205 (227)
T ss_dssp T---TSCEEEECHHHHHHHTCCTHHHHSSCGGGGBCTTSCHHHHHHHHHHHHHTCCEECCEEEEEECCSSSSCEEEEEEE
T ss_pred C---CCcEEEEchHHHHHhCCCHHHHcCCChhhccCCCCCHHHHHHHHHHHHcCCceeEEEEEECCCCCcCcccceEEEE
Confidence 8 77799999999999999999999999998888888888999999999999999999999999997 89999
Q ss_pred EEeeeeecCCCCEEEEEEEEec
Q 002356 281 LTIAPIKDDEGKVLKFIGMQVE 302 (931)
Q Consensus 281 ~~~~pi~d~~G~v~~~v~~~~D 302 (931)
++++|++|.+|.+.+++++++|
T Consensus 206 ~~~~pi~d~~g~~~~~v~i~~D 227 (227)
T 3ewk_A 206 ISTTPIHTDGNGLVGYVQIQHD 227 (227)
T ss_dssp EEEEEEECSSSCEEEEEEEEEC
T ss_pred EEEEEEECCCCCEEEEEEEecC
Confidence 9999999999999999999988
No 260
>2pr5_A Blue-light photoreceptor; light-oxygen-voltage, LOV, PER-ARNT-SIM, PAS, flavoprotein, protein; HET: FMN; 1.45A {Bacillus subtilis} PDB: 2pr6_A*
Probab=99.74 E-value=2e-17 Score=157.02 Aligned_cols=122 Identities=41% Similarity=0.722 Sum_probs=106.4
Q ss_pred HHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEe
Q 002356 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYK 271 (931)
Q Consensus 192 ~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~ 271 (931)
+.++++++++|+++|..+.+|+|+|+|++|++++||+.+|++|+++..+.+++........++..+..+..+..+++.++
T Consensus 2 ~~~~~~~~~~i~~~d~~g~~~~i~~~N~a~~~~~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 81 (132)
T 2pr5_A 2 SHMLDHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKNCRFLQGKHTDPAEVDNIRTALQNKEPVTVQIQNYK 81 (132)
T ss_dssp ----CCCCCEEEEECTTSTTCCEEEECHHHHHHHSCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEEC
T ss_pred hhHHhcCCCcEEEEeCCCCCCcEEEECHHHHHHhCcCHHHHcCCChhhhCCCCCCHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 35789999999999985545689999999999999999999999988777777777777788888888888999999999
Q ss_pred cCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhc
Q 002356 272 KDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (931)
Q Consensus 272 kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~ 315 (931)
+||+.+|+.+++.|+.+.+ +.+++++++|||++|++|++|+.
T Consensus 82 kdG~~~~~~~~~~~~~~~~--~~~~~~~~~DITe~k~~e~~l~~ 123 (132)
T 2pr5_A 82 KDGTMFWNELNIDPMEIED--KTYFVGIQNDITKQKEYEKLLED 123 (132)
T ss_dssp TTSCEEEEEEEEEEEEETT--EEEEEEEEEECHHHHHHHHHHHH
T ss_pred cCCCeeeeEEEEEeccCCC--eeEEEEEEEeCcHHHHHHHHHHH
Confidence 9999999999999999865 88999999999999999999873
No 261
>1n9l_A PHOT-LOV1, putative blue light receptor; phototropin, flavin, electron transport; HET: FMN; 1.90A {Chlamydomonas reinhardtii} SCOP: d.110.3.6 PDB: 1n9n_A* 1n9o_A*
Probab=99.74 E-value=2.2e-17 Score=151.62 Aligned_cols=109 Identities=60% Similarity=1.125 Sum_probs=101.1
Q ss_pred hcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcE
Q 002356 197 TFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTP 276 (931)
Q Consensus 197 ~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~ 276 (931)
+++++|+++|..+.+|+|+|+|++|++++||+.+|++|+++..+.++.........++.++..+..+.++++.++|||+.
T Consensus 1 ~~~~~i~i~d~~~~~g~i~~~N~a~~~l~Gy~~~e~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~kdG~~ 80 (109)
T 1n9l_A 1 GLRHTFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEGTDPKEVQKIRDAIKKGEACSVRLLNYRKDGTP 80 (109)
T ss_dssp CCSCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEECTTSCE
T ss_pred CCccEEEEEcCCCCCCeEEEEchHHHHHHCcCHHHHcCCCchhcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEcCCCCE
Confidence 36789999997666899999999999999999999999998888888777777889999999999999999999999999
Q ss_pred EEEEEEeeeeecCCCCEEEEEEEEecchh
Q 002356 277 FWNLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (931)
Q Consensus 277 ~w~~~~~~pi~d~~G~v~~~v~~~~DITe 305 (931)
+|+.++++|++|++|.+.+++++++|||+
T Consensus 81 ~~~~~~~~pi~d~~G~~~~~v~~~~DITe 109 (109)
T 1n9l_A 81 FWNLLTVTPIKTPDGRVSKFVGVQVDVTS 109 (109)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEECCC
T ss_pred EEEEEEEEEEECCCCCEEEEEEEEEeCCC
Confidence 99999999999999999999999999995
No 262
>2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii}
Probab=99.74 E-value=2.7e-17 Score=153.29 Aligned_cols=115 Identities=24% Similarity=0.388 Sum_probs=107.1
Q ss_pred cHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEE
Q 002356 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (931)
Q Consensus 473 ~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~ 552 (931)
.|+.++++++++|+++|.+|+ |+|+|++|++++||+.+|++|++...+.+++........++..+..+..+..+++.
T Consensus 6 ~~~~~~~~~~~~i~~~d~~g~---i~~~N~a~~~~~G~~~~elig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 82 (120)
T 2gj3_A 6 IFRQTVEHAPIAISITDLKAN---ILYANRAFRTITGYGSEEVLGKNESILSNGTTPRLVYQALWGRLAQKKPWSGVLVN 82 (120)
T ss_dssp HHHHHHHHCSSEEEEECTTCB---EEEECHHHHHHHCCCTTGGGGCBGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHhCCCeEEEECCCCC---EEeehHHHHHHHCcCHHHHcCCCHHHcCCCCCCHHHHHHHHHHHHcCCCEEEEEEE
Confidence 488999999999999999888 99999999999999999999999888888777776777888888888899999999
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccc
Q 002356 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHL 590 (931)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk 590 (931)
+++||+.+|+.+++.|++|.+|.+.+++++++|||++|
T Consensus 83 ~~~dG~~~~~~~~~~pi~~~~g~~~~~v~~~~DITe~k 120 (120)
T 2gj3_A 83 RRKDKTLYLAELTVAPVLNEAGETIYYLGMHRDTSELH 120 (120)
T ss_dssp ECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCSCC
T ss_pred EcCCCCEEEEEEEEEEEECCCCCEEEEEEEeccCcccC
Confidence 99999999999999999999999999999999999986
No 263
>3ue6_A Aureochrome1; PAS/LOV domain, FMN-binding blue-light photoreceptor, signal protein; HET: FMN; 2.75A {Vaucheria frigida} PDB: 3ulf_A*
Probab=99.72 E-value=8.5e-17 Score=157.81 Aligned_cols=141 Identities=40% Similarity=0.715 Sum_probs=119.4
Q ss_pred ccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHH
Q 002356 174 MSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKI 253 (931)
Q Consensus 174 it~~~~~e~~l~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l 253 (931)
..++++.++++...++.++.++++++++++++|....+|+|+++|++|++++||+.++++|+++..+.+++........+
T Consensus 20 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~g~i~~~N~~~~~l~G~~~~e~~g~~~~~l~~~~~~~~~~~~~ 99 (166)
T 3ue6_A 20 TDNPSKANRILEDPDYSLVKALQMAQQNFVITDASLPDNPIVYASRGFLTLTGYSLDQILGRNCRFLQGPETDPRAVDKI 99 (166)
T ss_dssp -----------CCCCCHHHHHHHHTTSCEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHH
T ss_pred ehhhhHHHHHHHHHHHHHHHHHhcCCceEEEEEccCCCCcEEEECHHHHHHhCcCHHHHcCCCHhheeCCCCCHHHHHHH
Confidence 44566778888899999999999999999999974335779999999999999999999999988888888888888888
Q ss_pred HHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhh
Q 002356 254 RETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (931)
Q Consensus 254 ~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (931)
...+..+..+..++..++++|..+|+.+++.|+.|.+|.+.+++++++|||++|+++...+
T Consensus 100 ~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~~~~~e 160 (166)
T 3ue6_A 100 RNAITKGVDTSVCLLNYRQDGTTFWNLFFVAGLRDSKGNIVNYVGVQSKVSEDYAKLLVNE 160 (166)
T ss_dssp HHHHHHTCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEECCBCCHHHHHHHHHH
T ss_pred HHHHhcCCceEEEEEEEcCCCCEEEEEEEEEeeeCCCCCEEEEEEEEEechHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999998876644
No 264
>3p7n_A Sensor histidine kinase; LOV domain, light-activated transcription factor, DNA bindin; HET: FMN; 2.10A {Erythrobacter litoralis}
Probab=99.71 E-value=5.6e-17 Score=173.12 Aligned_cols=136 Identities=38% Similarity=0.609 Sum_probs=110.9
Q ss_pred cccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHH
Q 002356 175 SDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIR 254 (931)
Q Consensus 175 t~~~~~e~~l~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~ 254 (931)
.....++++++++++.|+.++++++++|+++|..+.+|+|+|+|++|++++||+.+|++|+++..+.+++........+.
T Consensus 49 ~~~~~~~~~l~~~~~~~~~i~~~~~~~i~~~d~~~~~g~i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~~~~~~~~ 128 (258)
T 3p7n_A 49 PGADDTRVEVQPPAQWVLDLIEASPIASVVSDPRLADNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIR 128 (258)
T ss_dssp ------------CCHHHHHHHHTCSSEEEEECTTSTTCCEEEECHHHHHHHCCCGGGTTTSCGGGGCCTTCCHHHHHHHH
T ss_pred CcchhhHHHHHhHHHHHHHHHhcCCccEEEEcCCCCCCcEEEEhHHHHHHcCCCHHHHCCCChhhccCCCCchhHHHHHH
Confidence 34444566788999999999999999999999855567799999999999999999999999988888888888888999
Q ss_pred HHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHH
Q 002356 255 ETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGA 310 (931)
Q Consensus 255 ~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e 310 (931)
..+..+..+..+++.+++||+.+|+.+++.|++|.+|.+.+++++++|||++|+.+
T Consensus 129 ~~l~~~~~~~~e~~~~~~dG~~~~~~~~~~pi~d~~g~~~~~v~~~~DITerk~~~ 184 (258)
T 3p7n_A 129 QGVREHKPVLVEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQVEVDDDQPNM 184 (258)
T ss_dssp HHHHHTCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCSEEEEEEEEEC-------
T ss_pred HHHHcCCCeEEEEEEEcCCCCEEEEeeEEEEEEcCCCCEEEEEEEeeecchhhhhh
Confidence 99999999999999999999999999999999999999999999999999995433
No 265
>4hia_A LOV protein; PAS, HTH, signaling protein; HET: FMN; 1.95A {Rhodobacter sphaeroides} PDB: 4hnb_A* 4hj4_A* 4hj6_A* 4hj3_A*
Probab=99.71 E-value=1.1e-16 Score=159.34 Aligned_cols=128 Identities=27% Similarity=0.501 Sum_probs=117.0
Q ss_pred hHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEE
Q 002356 187 VSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGR 266 (931)
Q Consensus 187 ~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e 266 (931)
..+.|+.++++++++|+++|....+|+|+++|++|++++||+.++++|+++..+.+++........+...+..+..+..+
T Consensus 5 ~~~~~~~~~~~~~~~i~~~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 84 (176)
T 4hia_A 5 QFEKIRAVFDRSGVALTLVDMSLPEQPVVLANPPFLRMTGYTEGQILGFNCRFLQRGDENAQARADIRDALKLGRELQVV 84 (176)
T ss_dssp HHHHHHHHHHHCSSCCEEEETTSTTCCEEEECHHHHHHHTCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEecCCCCCcEEEECHHHHHHHCcCHHHHcCCCcceeeCCCCCHHHHHHHHHHHHcCCceEEE
Confidence 44678999999999999999842338899999999999999999999999888888888888888899999999999999
Q ss_pred EEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhh
Q 002356 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (931)
Q Consensus 267 ~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (931)
++.+++||+.+|+.+++.|++|.+|.+.+++++++|||++|++|++++
T Consensus 85 ~~~~~~dG~~~~~~~~~~pi~~~~g~~~~~~~~~~DITe~k~~e~~~~ 132 (176)
T 4hia_A 85 LRNYRANDEPFDNLLFLHPVGGRPDAPDYFLGSQFELGRSGNSEEAAA 132 (176)
T ss_dssp EEEECTTCCEEEEEEEEEEESSBTTBCSEEEEEEEEESSSGGGHHHHH
T ss_pred EEEEcCCCCEEEEEEEEEEeeCCCCCeEEEEEEEEECcHhhHHHHHHH
Confidence 999999999999999999999999999999999999999999998844
No 266
>2pr5_A Blue-light photoreceptor; light-oxygen-voltage, LOV, PER-ARNT-SIM, PAS, flavoprotein, protein; HET: FMN; 1.45A {Bacillus subtilis} PDB: 2pr6_A*
Probab=99.70 E-value=1.7e-16 Score=150.52 Aligned_cols=117 Identities=46% Similarity=0.833 Sum_probs=101.0
Q ss_pred HHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEe
Q 002356 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYT 554 (931)
Q Consensus 475 ~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~ 554 (931)
+.++++++++|+++|.+|.+++|+|+|++|++++||+.+|++|+++..+.+++........+...+..+..+..+++.++
T Consensus 2 ~~~~~~~~~~i~~~d~~g~~~~i~~~N~a~~~~~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 81 (132)
T 2pr5_A 2 SHMLDHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKNCRFLQGKHTDPAEVDNIRTALQNKEPVTVQIQNYK 81 (132)
T ss_dssp ----CCCCCEEEEECTTSTTCCEEEECHHHHHHHSCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEEC
T ss_pred hhHHhcCCCcEEEEeCCCCCCcEEEECHHHHHHhCcCHHHHcCCChhhhCCCCCCHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 35789999999999998733449999999999999999999999988887887777777788888888888999999999
Q ss_pred cCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccccc
Q 002356 555 KSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (931)
Q Consensus 555 kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e 593 (931)
+||+.+|+.+++.|+.+.+ +.+++++++|||++|++|
T Consensus 82 kdG~~~~~~~~~~~~~~~~--~~~~~~~~~DITe~k~~e 118 (132)
T 2pr5_A 82 KDGTMFWNELNIDPMEIED--KTYFVGIQNDITKQKEYE 118 (132)
T ss_dssp TTSCEEEEEEEEEEEEETT--EEEEEEEEEECHHHHHHH
T ss_pred cCCCeeeeEEEEEeccCCC--eeEEEEEEEeCcHHHHHH
Confidence 9999999999999999865 788999999999999843
No 267
>1n9l_A PHOT-LOV1, putative blue light receptor; phototropin, flavin, electron transport; HET: FMN; 1.90A {Chlamydomonas reinhardtii} SCOP: d.110.3.6 PDB: 1n9n_A* 1n9o_A*
Probab=99.69 E-value=3.1e-16 Score=143.88 Aligned_cols=108 Identities=45% Similarity=0.912 Sum_probs=98.1
Q ss_pred ccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCcEE
Q 002356 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKF 560 (931)
Q Consensus 481 ~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~ 560 (931)
++++|+++|....+++|+|+|++|++++||+.+|++|+++..+.+++......+.++..+..+..+..+++.+++||+.+
T Consensus 2 ~~~~i~i~d~~~~~g~i~~~N~a~~~l~Gy~~~e~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~kdG~~~ 81 (109)
T 1n9l_A 2 LRHTFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEGTDPKEVQKIRDAIKKGEACSVRLLNYRKDGTPF 81 (109)
T ss_dssp CSCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEECTTSCEE
T ss_pred CccEEEEEcCCCCCCeEEEEchHHHHHHCcCHHHHcCCCchhcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEcCCCCEE
Confidence 57899999964223349999999999999999999999988888888777778889999999999999999999999999
Q ss_pred EEEEEEEeeecCCCCEEEEEEEEecCCc
Q 002356 561 WNLFHLQPMRDQKGEVQYFIGVQLDGSE 588 (931)
Q Consensus 561 wv~~~~~pi~d~~G~~~~~vgi~rDITe 588 (931)
|+.+++.|++|++|++.+++++++|||+
T Consensus 82 ~~~~~~~pi~d~~G~~~~~v~~~~DITe 109 (109)
T 1n9l_A 82 WNLLTVTPIKTPDGRVSKFVGVQVDVTS 109 (109)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECCC
T ss_pred EEEEEEEEEECCCCCEEEEEEEEEeCCC
Confidence 9999999999999999999999999996
No 268
>4hia_A LOV protein; PAS, HTH, signaling protein; HET: FMN; 1.95A {Rhodobacter sphaeroides} PDB: 4hnb_A* 4hj4_A* 4hj6_A* 4hj3_A*
Probab=99.68 E-value=3.4e-16 Score=155.93 Aligned_cols=120 Identities=28% Similarity=0.504 Sum_probs=112.7
Q ss_pred cHHHHHhhccceEEEEcCC---CCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEE
Q 002356 473 DLATTLERIEKNFVITDPR---LPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQ 549 (931)
Q Consensus 473 ~l~~i~e~~~d~I~v~D~~---G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e 549 (931)
.|+.++++++++|+++|.+ |. |+++|++|++++||+.++++|+++..+.+++........+...+..+..+..+
T Consensus 8 ~~~~~~~~~~~~i~~~d~~~~~g~---i~~~N~a~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 84 (176)
T 4hia_A 8 KIRAVFDRSGVALTLVDMSLPEQP---VVLANPPFLRMTGYTEGQILGFNCRFLQRGDENAQARADIRDALKLGRELQVV 84 (176)
T ss_dssp HHHHHHHHCSSCCEEEETTSTTCC---EEEECHHHHHHHTCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHhcCCCcEEEEecCCCCCc---EEEECHHHHHHHCcCHHHHcCCCcceeeCCCCCHHHHHHHHHHHHcCCceEEE
Confidence 3899999999999999998 77 99999999999999999999999988999988888888888999999999999
Q ss_pred EEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccccccc
Q 002356 550 LINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (931)
Q Consensus 550 ~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e~~ 595 (931)
++..++||..+|+.+++.|+++.+|.+.+++++++|||++|++|..
T Consensus 85 ~~~~~~dG~~~~~~~~~~pi~~~~g~~~~~~~~~~DITe~k~~e~~ 130 (176)
T 4hia_A 85 LRNYRANDEPFDNLLFLHPVGGRPDAPDYFLGSQFELGRSGNSEEA 130 (176)
T ss_dssp EEEECTTCCEEEEEEEEEEESSBTTBCSEEEEEEEEESSSGGGHHH
T ss_pred EEEEcCCCCEEEEEEEEEEeeCCCCCeEEEEEEEEECcHhhHHHHH
Confidence 9999999999999999999999999999999999999999997655
No 269
>3mr0_A Sensory box histidine kinase/response regulator; PAS fold, structural genomics, PSI-2; HET: PG5; 1.49A {Burkholderia thailandensis}
Probab=99.68 E-value=4.1e-16 Score=150.15 Aligned_cols=131 Identities=15% Similarity=0.195 Sum_probs=112.8
Q ss_pred ccccchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCC--CCCCCCCCCCChHHHHHHHHHHHc
Q 002356 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGR--NCRFLQGAGTDPEDVAKIRETLQN 259 (931)
Q Consensus 182 ~~l~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~--~~~~l~~~~~~~~~~~~l~~~l~~ 259 (931)
++|+++++.|+.+++++++++|.+|. ++.++++|+++++++||+.+++.+. .+..++||++.......+..++..
T Consensus 2 ~aL~~se~rl~~~~~~~~~g~w~~d~---~~~~~~~s~~~~~~~G~~~~~~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~ 78 (142)
T 3mr0_A 2 NALSASEERFQLAVSGASAGLWDWNP---KTGAMYLSPHFKKIMGYEDHELPDEITGHRESIHPDDRARVLAALKAHLEH 78 (142)
T ss_dssp -------CCHHHHHHHTTCEEEEECT---TTCCEEECHHHHHHTTCCGGGSCSEEC---CCBCTTTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCcEEEEEEc---CCCeEEECHHHHHHhCCCccccCCCHHHHHhhcCHHHHHHHHHHHHHHHhC
Confidence 46888899999999999999999998 5669999999999999999998773 345678899888888888889999
Q ss_pred CCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhc
Q 002356 260 GQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (931)
Q Consensus 260 g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~ 315 (931)
+..+..+++.+++||..+|+.....|++|.+|.+.+++|+++|||++|++|++|+.
T Consensus 79 ~~~~~~e~r~~~~~G~~~w~~~~~~~~~d~~g~~~~~~G~~~DITerk~~E~~L~~ 134 (142)
T 3mr0_A 79 RDTYDVEYRVRTRSGDFRWIQSRGQALWNSAGEPYRMVGWIMDVTDRKRDEDALRV 134 (142)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHHHHHHH
T ss_pred CCceEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEcCchHHHHHHHHHH
Confidence 98999999999999999999999999999999999999999999999999999874
No 270
>3rty_A Period circadian protein; PAS domain, signalling, timeless, circadian clock protein; 2.85A {Drosophila melanogaster} PDB: 1wa9_A 3gec_A
Probab=99.68 E-value=5.5e-16 Score=171.22 Aligned_cols=107 Identities=7% Similarity=0.012 Sum_probs=93.9
Q ss_pred cceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCc-----EEEEEEEEecC
Q 002356 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-----VTVQLINYTKS 556 (931)
Q Consensus 482 ~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~-----~~~e~~~~~kd 556 (931)
.+.++..+.+|. |+|+|+++..++||+++|++|+++..++||++.....+.+...+..|.. ...+++++++|
T Consensus 154 ~~fi~r~~~dG~---~~yvn~~~~~lLGY~peELiG~s~~~~vHPdD~~~~~~~~~~~l~~G~~~~~~~~s~~yR~~~kd 230 (339)
T 3rty_A 154 PKFAIRHTATGI---ISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQN 230 (339)
T ss_dssp CEEEEEEETTCB---EEEECTTHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHTTSTTCCCBCCCEEEECTT
T ss_pred ceEEEEECCCCe---EEEcChhhhcccCCCHHHHcCCcHHHEECHHHHHHHHHHHHHHHHcCCcccccccceEEEEEccC
Confidence 467788899888 9999999999999999999999999999999998888888888876654 35789999999
Q ss_pred CcEEEEEEEEEeeecCC-CCEEEEEEEEecCCcccc
Q 002356 557 GKKFWNLFHLQPMRDQK-GEVQYFIGVQLDGSEHLE 591 (931)
Q Consensus 557 G~~~wv~~~~~pi~d~~-G~~~~~vgi~rDITerk~ 591 (931)
|..+|++.+..+++|.. +++.+++|+-+.|+....
T Consensus 231 G~~vWlet~~~~~~np~s~~~~~II~~h~vi~~p~~ 266 (339)
T 3rty_A 231 GCYVLLETEWTSFVNPWSRKLEFVVGHHRVFQGPKQ 266 (339)
T ss_dssp SCEEEEEEEEEEEECTTTCSEEEEEEEEEEEECCSS
T ss_pred CCEEEEEEEEEEEECCCCCCeeEEEEEEEECCCCCC
Confidence 99999999999999875 567788999888888765
No 271
>3p7n_A Sensor histidine kinase; LOV domain, light-activated transcription factor, DNA bindin; HET: FMN; 2.10A {Erythrobacter litoralis}
Probab=99.66 E-value=3.9e-16 Score=166.58 Aligned_cols=132 Identities=32% Similarity=0.547 Sum_probs=107.3
Q ss_pred CchhhHHHHHhhhhc-ccHHHHHhhccceEEEEcC---CCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHH
Q 002356 457 DSVDDKVRQKEMRKG-IDLATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPAT 532 (931)
Q Consensus 457 dv~~r~~~~~~l~~~-~~l~~i~e~~~d~I~v~D~---~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~ 532 (931)
.+..+...++++++. ..|+.++++++++|+++|. +|+ |+++|++|++++||+++|++|+++..+.++++....
T Consensus 47 ~~~~~~~~~~~l~~~~~~~~~i~~~~~~~i~~~d~~~~~g~---i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~~~ 123 (258)
T 3p7n_A 47 GAPGADDTRVEVQPPAQWVLDLIEASPIASVVSDPRLADNP---LIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWL 123 (258)
T ss_dssp --------------CCHHHHHHHHTCSSEEEEECTTSTTCC---EEEECHHHHHHHCCCGGGTTTSCGGGGCCTTCCHHH
T ss_pred cCCcchhhHHHHHhHHHHHHHHHhcCCccEEEEcCCCCCCc---EEEEhHHHHHHcCCCHHHHCCCChhhccCCCCchhH
Confidence 344445555666555 5699999999999999999 777 999999999999999999999999999999988888
Q ss_pred HHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccc
Q 002356 533 VRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (931)
Q Consensus 533 ~~~l~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~ 591 (931)
...+...+..+..+..+++.+++||..+|+.+++.|++|.+|.+.+++++++|||++|+
T Consensus 124 ~~~~~~~l~~~~~~~~e~~~~~~dG~~~~~~~~~~pi~d~~g~~~~~v~~~~DITerk~ 182 (258)
T 3p7n_A 124 TDKIRQGVREHKPVLVEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQVEVDDDQP 182 (258)
T ss_dssp HHHHHHHHHHTCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCSEEEEEEEEEC-----
T ss_pred HHHHHHHHHcCCCeEEEEEEEcCCCCEEEEeeEEEEEEcCCCCEEEEEEEeeecchhhh
Confidence 88899999999999999999999999999999999999999999999999999999965
No 272
>3t50_A Blue-light-activated histidine kinase; PAS superfamily, blue-light photoreceptor, FMN binding, TRAN; HET: FMN; 1.64A {Brucella melitensis}
Probab=99.66 E-value=6.8e-16 Score=144.27 Aligned_cols=122 Identities=35% Similarity=0.679 Sum_probs=105.9
Q ss_pred HHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecC
Q 002356 194 ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKD 273 (931)
Q Consensus 194 ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kd 273 (931)
++++++++++++|..+.+|+|+++|++|++++||+.++++|+++..+.++.........+...+..+..+..+++.++++
T Consensus 2 ~~~~~~~~i~~~d~~~~~g~i~~~N~~~~~l~g~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (128)
T 3t50_A 2 ASEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRNCRFLQGHGTDPAHVRAIKSAIAAEKPIDIDIINYKKS 81 (128)
T ss_dssp CCCCCSSCEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEECTT
T ss_pred ccccCcccEEEecCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHhhhcCCccCHHHHHHHHHHHHcCCCceeEEEEEcCC
Confidence 46789999999997444667999999999999999999999998888888888888888899999999999999999999
Q ss_pred CcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhc
Q 002356 274 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (931)
Q Consensus 274 G~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~ 315 (931)
|..+|+.+++.|+.+.+|.+.+++++++|||++|++|++...
T Consensus 82 g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~e~~~~~ 123 (128)
T 3t50_A 82 GEAFWNRLHISPVHNANGRLQHFVSSQLDVTLELVPRGSLEH 123 (128)
T ss_dssp CCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHC-------
T ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEEcchhhhhhhhhhh
Confidence 999999999999999999999999999999999999988763
No 273
>3f1p_B ARYL hydrocarbon receptor nuclear translocator; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.0 PDB: 3f1o_B* 3f1n_B 3h7w_B* 3h82_B* 1x0o_A 2hv1_A 4h6j_B 2b02_A* 2k7s_A 2a24_B
Probab=99.66 E-value=2.4e-16 Score=146.75 Aligned_cols=115 Identities=12% Similarity=0.166 Sum_probs=101.0
Q ss_pred HHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHH-cCCcEEEEEEE
Q 002356 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAID-NQTDVTVQLIN 552 (931)
Q Consensus 474 l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~-~~~~~~~e~~~ 552 (931)
+..+++++++.|+++|.+|+ |+|+|+++++++||+++|++|+++..++||++.....+.+...+. .+..+..|+++
T Consensus 4 ~~ll~e~~~d~i~~~d~~g~---i~~~n~~~~~~~G~~~~el~g~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~~~e~r~ 80 (121)
T 3f1p_B 4 KGLNVCQPTRFISRHNIEGI---FTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRF 80 (121)
T ss_dssp ----CCCCCEEEEEECTTSB---EEEECTTHHHHHSCCGGGTTTSBGGGGBCTTTHHHHHHHHHHHTTSTTCCEEEEEEE
T ss_pred ccceecCCCceEEEECCCce---EEEECcchhhhhCCChHHHcCCCHHHeECHHHHHHHHHHHHHHHhcCCCcccEEEEE
Confidence 45678999999999999888 999999999999999999999999999999998888788877774 45578999999
Q ss_pred EecCCcEEEEEEEEEeeecC-CCCEEEEEEEEecCCcccc
Q 002356 553 YTKSGKKFWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (931)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~-~G~~~~~vgi~rDITerk~ 591 (931)
+++||+.+|+.++..|++|. +|.+.+++|+.+|||++|+
T Consensus 81 ~~~dG~~~w~~~~~~~~~~~~~g~~~~iv~~~~DIT~~kq 120 (121)
T 3f1p_B 81 RSKNQEWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQ 120 (121)
T ss_dssp ECTTSCEEEEEEEEEEECCTTCCCCCEEEEEEEECCCC--
T ss_pred EecCCCEEEEEEEEEEEECCCCCceeEEEEEeEEcccccC
Confidence 99999999999999999987 7888999999999999986
No 274
>3f1p_B ARYL hydrocarbon receptor nuclear translocator; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.0 PDB: 3f1o_B* 3f1n_B 3h7w_B* 3h82_B* 1x0o_A 2hv1_A 4h6j_B 2b02_A* 2k7s_A 2a24_B
Probab=99.65 E-value=2.2e-16 Score=146.95 Aligned_cols=116 Identities=9% Similarity=0.109 Sum_probs=99.8
Q ss_pred HHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHH-cCCcEEEEEE
Q 002356 190 IVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQ-NGQSYCGRLL 268 (931)
Q Consensus 190 ~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~-~g~~~~~e~~ 268 (931)
.+..+++++++.|+++|. +|+|+|+|+++++++||+++|++|+++..+++|++.......+...+. .+..+..+++
T Consensus 3 ~~~ll~e~~~d~i~~~d~---~g~i~~~n~~~~~~~G~~~~el~g~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~~~e~r 79 (121)
T 3f1p_B 3 FKGLNVCQPTRFISRHNI---EGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFR 79 (121)
T ss_dssp -----CCCCCEEEEEECT---TSBEEEECTTHHHHHSCCGGGTTTSBGGGGBCTTTHHHHHHHHHHHTTSTTCCEEEEEE
T ss_pred cccceecCCCceEEEECC---CceEEEECcchhhhhCCChHHHcCCCHHHeECHHHHHHHHHHHHHHHhcCCCcccEEEE
Confidence 345678999999999998 788999999999999999999999998888999888877788877775 4556888999
Q ss_pred EEecCCcEEEEEEEeeeeecC-CCCEEEEEEEEecchhhhH
Q 002356 269 NYKKDGTPFWNLLTIAPIKDD-EGKVLKFIGMQVEVSKHTE 308 (931)
Q Consensus 269 ~~~kdG~~~w~~~~~~pi~d~-~G~v~~~v~~~~DITerk~ 308 (931)
.+++||+.+|++++..|++|. +|.+.+++++.+|||++|+
T Consensus 80 ~~~~dG~~~w~~~~~~~~~~~~~g~~~~iv~~~~DIT~~kq 120 (121)
T 3f1p_B 80 FRSKNQEWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQ 120 (121)
T ss_dssp EECTTSCEEEEEEEEEEECCTTCCCCCEEEEEEEECCCC--
T ss_pred EEecCCCEEEEEEEEEEEECCCCCceeEEEEEeEEcccccC
Confidence 999999999999999999987 7889999999999999886
No 275
>3ue6_A Aureochrome1; PAS/LOV domain, FMN-binding blue-light photoreceptor, signal protein; HET: FMN; 2.75A {Vaucheria frigida} PDB: 3ulf_A*
Probab=99.64 E-value=7.7e-16 Score=150.89 Aligned_cols=129 Identities=47% Similarity=0.796 Sum_probs=112.3
Q ss_pred hHHHHHhhhhc-ccHHHHHhhccceEEEEcC---CCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHH
Q 002356 461 DKVRQKEMRKG-IDLATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKI 536 (931)
Q Consensus 461 r~~~~~~l~~~-~~l~~i~e~~~d~I~v~D~---~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l 536 (931)
+...++.++.. ..|+.++++++++|+++|. +|. |+++|++|++++||+.++++|+++..+.+++........+
T Consensus 23 ~~~~~~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~g~---i~~~N~~~~~l~G~~~~e~~g~~~~~l~~~~~~~~~~~~~ 99 (166)
T 3ue6_A 23 PSKANRILEDPDYSLVKALQMAQQNFVITDASLPDNP---IVYASRGFLTLTGYSLDQILGRNCRFLQGPETDPRAVDKI 99 (166)
T ss_dssp --------CCCCCHHHHHHHHTTSCEEEEETTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCceEEEEEccCCCCc---EEEECHHHHHHhCcCHHHHcCCCHhheeCCCCCHHHHHHH
Confidence 34445555544 5699999999999999999 688 9999999999999999999999988888888888888888
Q ss_pred HHHHHcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccc
Q 002356 537 RAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (931)
Q Consensus 537 ~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~ 592 (931)
...+..+..+..++...+++|..+|+.+++.|+++.+|.+.+++++++|||++|++
T Consensus 100 ~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~ 155 (166)
T 3ue6_A 100 RNAITKGVDTSVCLLNYRQDGTTFWNLFFVAGLRDSKGNIVNYVGVQSKVSEDYAK 155 (166)
T ss_dssp HHHHHHTCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEECCBCCHHHHH
T ss_pred HHHHhcCCceEEEEEEEcCCCCEEEEEEEEEeeeCCCCCEEEEEEEEEechHHHHH
Confidence 88888999999999999999999999999999999999999999999999999974
No 276
>3mr0_A Sensory box histidine kinase/response regulator; PAS fold, structural genomics, PSI-2; HET: PG5; 1.49A {Burkholderia thailandensis}
Probab=99.63 E-value=3.3e-15 Score=143.78 Aligned_cols=120 Identities=15% Similarity=0.217 Sum_probs=108.4
Q ss_pred cccHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCC--CCCCCCCCCCCHHHHHHHHHHHHcCCcEEE
Q 002356 471 GIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGR--NCRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (931)
Q Consensus 471 ~~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~--~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~ 548 (931)
+..|+.+++.+++++|.+|.++. ++++|+++++++||+.+++.+. .+..++||++...+...+...+..+..+..
T Consensus 8 e~rl~~~~~~~~~g~w~~d~~~~---~~~~s~~~~~~~G~~~~~~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~ 84 (142)
T 3mr0_A 8 EERFQLAVSGASAGLWDWNPKTG---AMYLSPHFKKIMGYEDHELPDEITGHRESIHPDDRARVLAALKAHLEHRDTYDV 84 (142)
T ss_dssp -CCHHHHHHHTTCEEEEECTTTC---CEEECHHHHHHTTCCGGGSCSEEC---CCBCTTTHHHHHHHHHHHHHHCCCEEE
T ss_pred HHHHHHHHHhCCcEEEEEEcCCC---eEEECHHHHHHhCCCccccCCCHHHHHhhcCHHHHHHHHHHHHHHHhCCCceEE
Confidence 36799999999999999999888 9999999999999999998873 456788999998888888888888888999
Q ss_pred EEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccccc
Q 002356 549 QLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (931)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e 593 (931)
|++++++||..+|+.....|++|.+|.+.+++|+++|||++|++|
T Consensus 85 e~r~~~~~G~~~w~~~~~~~~~d~~g~~~~~~G~~~DITerk~~E 129 (142)
T 3mr0_A 85 EYRVRTRSGDFRWIQSRGQALWNSAGEPYRMVGWIMDVTDRKRDE 129 (142)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHH
T ss_pred EEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEcCchHHHHH
Confidence 999999999999999999999999999999999999999999854
No 277
>1d06_A Nitrogen fixation regulatory protein FIXL; oxygen sensor, histidine kinase, PAS, high-resolution, two-C system, signaling protein; HET: HEM; 1.40A {Sinorhizobium meliloti} SCOP: d.110.3.2 PDB: 1ew0_A*
Probab=99.63 E-value=5.2e-16 Score=146.69 Aligned_cols=125 Identities=22% Similarity=0.264 Sum_probs=101.2
Q ss_pred cccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHH
Q 002356 175 SDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIR 254 (931)
Q Consensus 175 t~~~~~e~~l~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~ 254 (931)
|+++++|++|+++++.|+.++++++++|+++|. +|+|+++|++|++++||+.+|++|+++..+.++.........+.
T Consensus 2 ~~~~~~e~~l~~~~~~~~~l~~~~~d~i~~~d~---~g~i~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~ 78 (130)
T 1d06_A 2 SHMLETEDVVRARDAHLRSILDTVPDATVVSAT---DGTIVSFNAAAVRQFGYAEEEVIGQNLRILMPEPYRHEHDGYLQ 78 (130)
T ss_dssp CHHHHHHHHHHHHTSCHHHHHTTCSSEEEEEET---TSBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCcCeEEEECC---CCeEEEEcHHHHHHHCCCHHHHcCCcHHHHCCchhHHHHHHHHH
Confidence 456778899999999999999999999999998 78899999999999999999999999887776655443334444
Q ss_pred HHHHcCCc----EEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002356 255 ETLQNGQS----YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (931)
Q Consensus 255 ~~l~~g~~----~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (931)
..+..+.. ...++..++|||+.+|+++++.|+.+. ...+++++++|||
T Consensus 79 ~~~~~~~~~~~~~~~e~~~~~kdG~~~~~~~~~~~~~~~--~~~~~~~~~~DIT 130 (130)
T 1d06_A 79 RYMATGEKRIIGIDRVVSGQRKDGSTFPMKLAVGEMRSG--GERFFTGFIRDLT 130 (130)
T ss_dssp HHHHHCCCSSTTSCEEEEEECTTSCEEEEEEEEEEEEET--TEEEEEEEEEECC
T ss_pred HHHhcCCccccCCeeEEEEEeCCCCEEEEEEEEEEEEEC--CeEEEEEEEEECc
Confidence 44444332 234667789999999999999999763 4456899999997
No 278
>3f1p_A Endothelial PAS domain-containing protein 1; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.7 PDB: 3f1o_A* 3f1n_A 3h7w_A* 3h82_A* 1p97_A 2a24_A 4h6j_A
Probab=99.63 E-value=7.1e-16 Score=142.47 Aligned_cols=109 Identities=17% Similarity=0.125 Sum_probs=101.4
Q ss_pred hccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCcE
Q 002356 480 RIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKK 559 (931)
Q Consensus 480 ~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~ 559 (931)
++++.|+++|.+|+ |+|+|+++++++||+++|++|+++..++||++.....+.+...+..+..+..+++++++||+.
T Consensus 7 ~~~~~i~~~d~~g~---i~~~n~~~~~~~Gy~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~ 83 (117)
T 3f1p_A 7 DSKTFLSEHSMDMK---FTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGY 83 (117)
T ss_dssp GGGEEEEEECTTCB---EEEECTHHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHSEEECCCEEEECTTSSE
T ss_pred CCccEEEEECCCce---EEEECcChhhhhCCCHHHHcCCchhheECHHHHHHHHHHHHHHHhCCCeeeeEEEEEecCCCE
Confidence 45789999999888 999999999999999999999999999999998888888888888888888899999999999
Q ss_pred EEEEEEEEeeecC-CCCEEEEEEEEecCCcccc
Q 002356 560 FWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (931)
Q Consensus 560 ~wv~~~~~pi~d~-~G~~~~~vgi~rDITerk~ 591 (931)
+|+.++..|++|. +|.+.+++++.+|||++|+
T Consensus 84 ~w~~~~~~~~~d~~~g~~~~iv~~~~DITer~~ 116 (117)
T 3f1p_A 84 VWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEK 116 (117)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEECSCCBC
T ss_pred EEEEEeeEEEECCCCCCceEEEEEeeecccccc
Confidence 9999999999998 7889999999999999987
No 279
>3sw1_A Sensory box protein; light-oxygen-voltage, LOV, PAS, signaling protein; HET: FMN; 2.63A {Pseudomonas putida}
Probab=99.63 E-value=4.2e-15 Score=145.17 Aligned_cols=131 Identities=31% Similarity=0.563 Sum_probs=119.0
Q ss_pred chHHHHHHHHHhcCCcEEEEeCCCCCC---ceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCc
Q 002356 186 RVSDIVKDALSTFQQTFVVSDATKPDY---PIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS 262 (931)
Q Consensus 186 ~~~~~~~~ile~~~~~i~v~D~~~~dG---~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~ 262 (931)
..++.++.++++++++++++|. +| +|+++|++|++++||+.++++|+++..+.++.........+...+..+..
T Consensus 22 ~~~~~~~~i~~~~~~~i~~~d~---~~~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (162)
T 3sw1_A 22 INAQLLQSMVDASNDGIVVAEK---EGDDTILIYVNAAFEYLTGYSRDEILYQDCRFLQGDDRDQLGRARIRKAMAEGRP 98 (162)
T ss_dssp CCHHHHHHHHHTCSSEEEEEEE---ETTEEEEEEECHHHHHHHTCCHHHHTTSBGGGGTTTCCCCHHHHHHHHHHHHTCC
T ss_pred chHHHHHHHHhhccCcEEEEeC---CCCccEEEEECHHHHHHHCCCHHHHcCCCcceecCCCcCHHHHHHHHHHHhcCCC
Confidence 4567899999999999999998 66 89999999999999999999999988888887777788888889999999
Q ss_pred EEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhcCCCC
Q 002356 263 YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNG 319 (931)
Q Consensus 263 ~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~~~~~ 319 (931)
+..++...+++|..+|+.+++.|+.+.+|.+.+++++++|||++++++++|+.....
T Consensus 99 ~~~~~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DiTe~k~~e~~l~~~~~~ 155 (162)
T 3sw1_A 99 CREVLRNYRKDGSAFWNELSITPVKSDFDQRTYFIGIQKDVSRQVELERELAELRAR 155 (162)
T ss_dssp EEEEEEEECTTCCEEEEEEEEEEEECSSSSCEEEEEEEEECHHHHHHHHHHHHHTC-
T ss_pred CcceEEEECCCCCEEEEEEEEEEeecCCCCEEEEEEEEEeCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998854443
No 280
>4eet_B Phototropin-2; LOV, blue light photoreceptor, signaling protein, flavoprote; HET: FMN; 1.20A {Arabidopsis thaliana} PDB: 4ees_A* 4eer_A* 4eep_A* 4eeu_A* 1jnu_A* 1g28_A*
Probab=99.62 E-value=6.9e-15 Score=133.63 Aligned_cols=114 Identities=41% Similarity=0.829 Sum_probs=101.8
Q ss_pred HHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecC
Q 002356 194 ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKD 273 (931)
Q Consensus 194 ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kd 273 (931)
++++++++++++|....+|+|+++|++|++++||+.++++|+++..+.++.........+...+..+..+..+++.++++
T Consensus 2 ~l~~~~~~i~~~d~~~~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (115)
T 4eet_B 2 SPEFIEKNFVITDPRLPDNPIIFASDGFLELTEYSREEILGRNARFLQGPETDQATVQKIRDAIRDQRETTVQLINYTKS 81 (115)
T ss_dssp ---CCCCSEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEECTT
T ss_pred ccccCCCcEEEEcCCCCCCcEEEEcHHHHHHHCcCHHHHhCCCHHHhcCCCCChHHHHHHHHHHHcCCCcceEEEEecCC
Confidence 57899999999997333566999999999999999999999998888888888888888899999999999999999999
Q ss_pred CcEEEEEEEeeeeecCCCCEEEEEEEEecchhhh
Q 002356 274 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHT 307 (931)
Q Consensus 274 G~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk 307 (931)
|+.+|+.+++.|+.+.+|.+.+++++++|||+++
T Consensus 82 g~~~~~~~~~~~~~~~~g~~~~~~~~~~DITer~ 115 (115)
T 4eet_B 82 GKKFWNLLHLQPVRDQKGELQYFIGVQLDGSDHV 115 (115)
T ss_dssp CCEEEEEEEEEEEECTTSCEEEEEEEEEECSCCC
T ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEeecccC
Confidence 9999999999999999999999999999999874
No 281
>3t50_A Blue-light-activated histidine kinase; PAS superfamily, blue-light photoreceptor, FMN binding, TRAN; HET: FMN; 1.64A {Brucella melitensis}
Probab=99.62 E-value=2.7e-15 Score=140.12 Aligned_cols=117 Identities=44% Similarity=0.791 Sum_probs=105.1
Q ss_pred HHhhccceEEEEcC---CCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002356 477 TLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (931)
Q Consensus 477 i~e~~~d~I~v~D~---~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (931)
++++++++|+++|. +|. |+++|++|++++||+.++++|+++..+.+++........+...+..+..+..+++..
T Consensus 2 ~~~~~~~~i~~~d~~~~~g~---i~~~N~~~~~l~g~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 78 (128)
T 3t50_A 2 ASEFTLMPMLITNPHLPDNP---IVFANPAFLKLTGYEADEVMGRNCRFLQGHGTDPAHVRAIKSAIAAEKPIDIDIINY 78 (128)
T ss_dssp CCCCCSSCEEEECTTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccccCcccEEEecCCCCCCc---EEEEcHHHHHHhCcCHHHHcCCCHhhhcCCccCHHHHHHHHHHHHcCCCceeEEEEE
Confidence 46789999999999 667 999999999999999999999998888888888888888888899999999999999
Q ss_pred ecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccccccC
Q 002356 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (931)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e~~~ 596 (931)
+++|..+|+.+++.|+.+.+|.+.+++++++|||++|++|...
T Consensus 79 ~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~e~~~ 121 (128)
T 3t50_A 79 KKSGEAFWNRLHISPVHNANGRLQHFVSSQLDVTLELVPRGSL 121 (128)
T ss_dssp CTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHC-----
T ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEcchhhhhhhhh
Confidence 9999999999999999999999999999999999999965444
No 282
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.61 E-value=5.7e-16 Score=172.98 Aligned_cols=141 Identities=14% Similarity=0.137 Sum_probs=102.0
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccC------------hHH-----HH--HHHHHHHHHHhcCCCC
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN------------RNK-----VH--RACAEREILDMLDHPF 730 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~------------~~~-----~~--~~~~E~~il~~l~hpn 730 (931)
-|.+..+||.|+||.||+|.+ .+|+.||||+++...... ... .. ....|...|.++.+.+
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d-~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVAD-EKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEEC-TTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEecCEeeeCCceEEEEEEC-CCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 499999999999999999998 469999999986432110 000 01 1134677777775554
Q ss_pred ccceeEEEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC--
Q 002356 731 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-- 808 (931)
Q Consensus 731 Iv~l~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g-- 808 (931)
+....-+.... .+|||||++|++|..+.. ......++.||+.+|.|||++|||||||||.|||++.+|
T Consensus 175 v~vp~p~~~~~--~~LVME~i~G~~L~~l~~--------~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~ 244 (397)
T 4gyi_A 175 FPVPEPIAQSR--HTIVMSLVDALPMRQVSS--------VPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDA 244 (397)
T ss_dssp CSCCCEEEEET--TEEEEECCSCEEGGGCCC--------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECS
T ss_pred CCCCeeeeccC--ceEEEEecCCccHhhhcc--------cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCc
Confidence 43222111222 379999999988865432 123467889999999999999999999999999998776
Q ss_pred --------cEEEEeccCCccc
Q 002356 809 --------HVSLTDFDLSCLT 821 (931)
Q Consensus 809 --------~vkL~DFG~a~~~ 821 (931)
.+.|+||+.+...
T Consensus 245 ~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 245 EDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SCTTSEEEEEEECCCTTCEET
T ss_pred ccccccccceEEEEeCCcccC
Confidence 3899999988553
No 283
>2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca}
Probab=99.61 E-value=6e-15 Score=136.97 Aligned_cols=114 Identities=16% Similarity=0.196 Sum_probs=93.4
Q ss_pred ccccchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCC
Q 002356 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (931)
Q Consensus 182 ~~l~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~ 261 (931)
+.|+++++.|+.++++++++|+++|. +|+|+++|++|++++||+.+|++|+++..+.++.... ........+..+.
T Consensus 4 ~~l~~se~~~~~l~e~~~d~i~~~d~---~g~i~~vN~a~~~l~Gy~~~el~g~~~~~~~~~~~~~-~~~~~~~~~~~~~ 79 (117)
T 2r78_A 4 ENLYFQSNAYRALFEHAIDGIFIMDA---EGHYLDVNPAICSAIGYTRDEFLALDWGVLSRGVDSG-WAAASLARIVGGE 79 (117)
T ss_dssp CSHHHHHHHHHHHHHHCSSEEEEECT---TSBEEEECHHHHHHHCCCHHHHTTCBTTTTTTCSTTS-HHHHHHHHHHTTC
T ss_pred hHHHHhHHHHHHHHhcCCceEEEECC---CCCEEEecHHHHHHHCcCHHHHcCCCHHHhCCccchh-HHHHHHHHHHcCC
Confidence 45788899999999999999999998 7889999999999999999999999877665443322 2334455667777
Q ss_pred cEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002356 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (931)
Q Consensus 262 ~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (931)
.+..+.+.++|||+.+|++++++|+. +|. ++++++|||
T Consensus 80 ~~~~e~~~~~kdG~~~~v~~~~~~~~--~g~---~~~i~~DIT 117 (117)
T 2r78_A 80 PLREERTVWTRNGDQLTVELSAHLLP--DGK---ILGIARDVS 117 (117)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEEECT--TSC---EEEEEEC--
T ss_pred cEEEEEEEEecCCCEEEEEEEEEEec--CCe---EEEEEEeCC
Confidence 78889999999999999999999985 566 678899997
No 284
>3f1p_A Endothelial PAS domain-containing protein 1; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.7 PDB: 3f1o_A* 3f1n_A 3h7w_A* 3h82_A* 1p97_A 2a24_A 4h6j_A
Probab=99.61 E-value=8.7e-16 Score=141.88 Aligned_cols=108 Identities=15% Similarity=0.156 Sum_probs=98.6
Q ss_pred cCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEE
Q 002356 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (931)
Q Consensus 198 ~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~ 277 (931)
.++.|+++|. +|+|+|+|+++++++||+++|++|+++..+.+|++.......+...+..+..+..+++.+++||+.+
T Consensus 8 ~~~~i~~~d~---~g~i~~~n~~~~~~~Gy~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~~ 84 (117)
T 3f1p_A 8 SKTFLSEHSM---DMKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYV 84 (117)
T ss_dssp GGEEEEEECT---TCBEEEECTHHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHSEEECCCEEEECTTSSEE
T ss_pred CccEEEEECC---CceEEEECcChhhhhCCCHHHHcCCchhheECHHHHHHHHHHHHHHHhCCCeeeeEEEEEecCCCEE
Confidence 3577888887 8889999999999999999999999988888998888888888888888888888999999999999
Q ss_pred EEEEEeeeeecC-CCCEEEEEEEEecchhhhH
Q 002356 278 WNLLTIAPIKDD-EGKVLKFIGMQVEVSKHTE 308 (931)
Q Consensus 278 w~~~~~~pi~d~-~G~v~~~v~~~~DITerk~ 308 (931)
|++++..|++|+ +|.+.+++++.+|||++|+
T Consensus 85 w~~~~~~~~~d~~~g~~~~iv~~~~DITer~~ 116 (117)
T 3f1p_A 85 WLETQGTVIYNPRNLQPQCIMCVNYVLSEIEK 116 (117)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEEEECSCCBC
T ss_pred EEEEeeEEEECCCCCCceEEEEEeeecccccc
Confidence 999999999998 7889999999999999885
No 285
>4eet_B Phototropin-2; LOV, blue light photoreceptor, signaling protein, flavoprote; HET: FMN; 1.20A {Arabidopsis thaliana} PDB: 4ees_A* 4eer_A* 4eep_A* 4eeu_A* 1jnu_A* 1g28_A*
Probab=99.61 E-value=1.1e-14 Score=132.26 Aligned_cols=111 Identities=82% Similarity=1.236 Sum_probs=102.1
Q ss_pred HHhhccceEEEEcC---CCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002356 477 TLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (931)
Q Consensus 477 i~e~~~d~I~v~D~---~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (931)
.+++++++|+++|. +|+ |+++|++|++++||+.++++|+++..+.+++........+...+..+..+..+.+..
T Consensus 2 ~l~~~~~~i~~~d~~~~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (115)
T 4eet_B 2 SPEFIEKNFVITDPRLPDNP---IIFASDGFLELTEYSREEILGRNARFLQGPETDQATVQKIRDAIRDQRETTVQLINY 78 (115)
T ss_dssp ---CCCCSEEEECTTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccccCCCcEEEEcCCCCCCc---EEEEcHHHHHHHCcCHHHHhCCCHHHhcCCCCChHHHHHHHHHHHcCCCcceEEEEe
Confidence 46889999999999 888 999999999999999999999998888888888888888888999999999999999
Q ss_pred ecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccc
Q 002356 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHL 590 (931)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk 590 (931)
+++|+.+|+.+++.|+++.+|.+.+++++++|||+++
T Consensus 79 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DITer~ 115 (115)
T 4eet_B 79 TKSGKKFWNLLHLQPVRDQKGELQYFIGVQLDGSDHV 115 (115)
T ss_dssp CTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECSCCC
T ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeecccC
Confidence 9999999999999999999999999999999999985
No 286
>3nja_A Probable ggdef family protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.37A {Chromobacterium violaceum}
Probab=99.60 E-value=2.4e-15 Score=138.85 Aligned_cols=123 Identities=11% Similarity=0.015 Sum_probs=94.7
Q ss_pred cccchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcC--CCCCCCCCCCCChHHHHHHHHHHHcC
Q 002356 183 GLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVG--RNCRFLQGAGTDPEDVAKIRETLQNG 260 (931)
Q Consensus 183 ~l~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG--~~~~~l~~~~~~~~~~~~l~~~l~~g 260 (931)
+|+++++.|+.++++++++++++|. +|.++++|+++++++||+.++++| ..+..+.+|++.......+...+..+
T Consensus 1 al~~~~~~l~~~~~~~~~~i~~~d~---~~~~~~~n~~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 77 (125)
T 3nja_A 1 SNAMAEKLLHTAESDAGIGSWVLHM---ESGRLEWSQAVHDIFGTDSATFDATEDAYFQRVHPDDRARVRRELDRHVLGD 77 (125)
T ss_dssp ----------------CCEEEEEET---TTTEEEECHHHHHHHTCCTTTCCCBHHHHHHHBCTTTHHHHHHHHHHHHHSC
T ss_pred CcHHHHHHHHHHHHhCCeeEEEEEc---CCCcEEECHHHHHHhCCCcccccccHHHHHhhcChhHHHHHHHHHHHHHhcC
Confidence 3667788999999999999999998 667999999999999999999999 44445677887777788888888998
Q ss_pred CcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhH
Q 002356 261 QSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308 (931)
Q Consensus 261 ~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~ 308 (931)
..+..+++.++++|..+|+.++..|+.+.+|.+.+++++++|||++|+
T Consensus 78 ~~~~~e~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~g~~~DITe~k~ 125 (125)
T 3nja_A 78 RPFDVEYRIVRPDGQVRELLERNHIQRQASGQVDHLWGTVIDMTEHKQ 125 (125)
T ss_dssp CCEEEEEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCC---
T ss_pred CCceEEEEEECCCCCEEEEEEeeEEEECCCCCEEEEEEEEEecccccC
Confidence 888999999999999999999999999999999999999999999875
No 287
>1d06_A Nitrogen fixation regulatory protein FIXL; oxygen sensor, histidine kinase, PAS, high-resolution, two-C system, signaling protein; HET: HEM; 1.40A {Sinorhizobium meliloti} SCOP: d.110.3.2 PDB: 1ew0_A*
Probab=99.60 E-value=5.5e-15 Score=139.55 Aligned_cols=124 Identities=16% Similarity=0.202 Sum_probs=100.5
Q ss_pred hhhHHHHHhhhhc-ccHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHH
Q 002356 459 VDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIR 537 (931)
Q Consensus 459 ~~r~~~~~~l~~~-~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~ 537 (931)
|++++.++++++. ..|+.++++++++|+++|.+|. |+++|+++++++||+++|++|+++..+++++........+.
T Consensus 2 ~~~~~~e~~l~~~~~~~~~l~~~~~d~i~~~d~~g~---i~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~ 78 (130)
T 1d06_A 2 SHMLETEDVVRARDAHLRSILDTVPDATVVSATDGT---IVSFNAAAVRQFGYAEEEVIGQNLRILMPEPYRHEHDGYLQ 78 (130)
T ss_dssp CHHHHHHHHHHHHTSCHHHHHTTCSSEEEEEETTSB---EEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCcCeEEEECCCCe---EEEEcHHHHHHHCCCHHHHcCCcHHHHCCchhHHHHHHHHH
Confidence 5678888888776 6799999999999999999888 99999999999999999999999888887765444444444
Q ss_pred HHHHcCCc----EEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCC
Q 002356 538 AAIDNQTD----VTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (931)
Q Consensus 538 ~~l~~~~~----~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDIT 587 (931)
.....+.. ...++..+++||+.+|+.+++.|+.+. ...+++++++|||
T Consensus 79 ~~~~~~~~~~~~~~~e~~~~~kdG~~~~~~~~~~~~~~~--~~~~~~~~~~DIT 130 (130)
T 1d06_A 79 RYMATGEKRIIGIDRVVSGQRKDGSTFPMKLAVGEMRSG--GERFFTGFIRDLT 130 (130)
T ss_dssp HHHHHCCCSSTTSCEEEEEECTTSCEEEEEEEEEEEEET--TEEEEEEEEEECC
T ss_pred HHHhcCCccccCCeeEEEEEeCCCCEEEEEEEEEEEEEC--CeEEEEEEEEECc
Confidence 44433322 245778899999999999999999764 3356899999998
No 288
>3mqq_A Transcriptional regulator, LUXR family; PAS domain, PSI, MCSG, structural genomics, center for structural genomics; 1.65A {Burkholderia thailandensis} PDB: 3mqo_A
Probab=99.60 E-value=1.6e-15 Score=140.95 Aligned_cols=115 Identities=15% Similarity=0.141 Sum_probs=93.6
Q ss_pred HHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCC-hHHHHHHHHHHHcCCcEEEEEE
Q 002356 190 IVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTD-PEDVAKIRETLQNGQSYCGRLL 268 (931)
Q Consensus 190 ~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~-~~~~~~l~~~l~~g~~~~~e~~ 268 (931)
.|+.+|++++++|+ +|. +|+|+++|++|++++||+.+|++|+++..+++++.. ......+...+..+..+..+++
T Consensus 4 ~~~~~~~~~~~~i~-~~~---~g~i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 79 (120)
T 3mqq_A 4 DYKTAFHLAPIGLV-LSR---DRVIEDCNDELAAIFRCARADLIGRSFEVLYPSSDEFERIGERISPVMIAHGSYADDRI 79 (120)
T ss_dssp CHHHHHHHCSSEEE-EEE---TTEEEEECHHHHHHTTSCHHHHTTCBGGGGSSSHHHHHHHHHHHHHHHHHHSCEEEEEE
T ss_pred hHHHHHhcCCceEE-Eec---CCEEHHHHHHHHHHhCcCHHHhCCCchhhccCChhhHHHHHHHHHHHHhcCCcceEEEE
Confidence 37889999999996 465 788999999999999999999999998766655332 3444556677777888899999
Q ss_pred EEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHH
Q 002356 269 NYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEG 309 (931)
Q Consensus 269 ~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~ 309 (931)
.+++||+.+|+.++..|+ +.+|...+++++++|||++|++
T Consensus 80 ~~~~dG~~~~~~~~~~~~-~~~~~~~~~v~~~~DITerk~~ 119 (120)
T 3mqq_A 80 MKRAGGELFWCHVTGRAL-DRTAPLAAGVWTFEDLSATRRV 119 (120)
T ss_dssp EECTTSCEEEEEEEEEES-STTSTTSSEEEEEEESCC----
T ss_pred EEeCCCCEEEEEEEEEEC-CCCCCceeEEEEEEcccHhhcc
Confidence 999999999999999998 5666677899999999999975
No 289
>2z6d_A Phototropin-2; PAS-fold, LOV-fold, alternative splicing, ATP-binding, chromophore, flavoprotein, FMN, kinase, membrane, nucleotide-binding; HET: FMN; 2.00A {Arabidopsis thaliana} PDB: 2z6c_A*
Probab=99.60 E-value=1.7e-14 Score=132.61 Aligned_cols=127 Identities=75% Similarity=1.225 Sum_probs=107.5
Q ss_pred chHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEE
Q 002356 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (931)
Q Consensus 186 ~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~ 265 (931)
+.++.++.++++++++++++|..+.+|+|+++|+++++++||+.++++|+++..+.++.........+...+..+..+..
T Consensus 3 ~~~~~~~~~~~~~~~~i~~~d~~d~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (130)
T 2z6d_A 3 RVSQELKTALSTLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQGPDTDKNEVAKIRDCVKNGKSYCG 82 (130)
T ss_dssp ----CHHHHHHHTTCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEE
T ss_pred hHHHHHHHHHHhcccceeeeeccCCCCcEEEecHHHHHHhCcCHHHHcCCChhhccCCCCCchHHHHHHHHHHcCCccee
Confidence 34567899999999999999932237889999999999999999999999988888877777777888888889988888
Q ss_pred EEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHH
Q 002356 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKD 312 (931)
Q Consensus 266 e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~ 312 (931)
++...+++|..+|+.+++.|+.+.+|.+.+++++++|||+++++|++
T Consensus 83 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~e~e 129 (130)
T 2z6d_A 83 RLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQVEVSKYTEGVND 129 (130)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCTTC-----
T ss_pred EEEEEcCCCcEEEEEEEEEEEECCCCCeeEEEEEEecchHHHHhhcc
Confidence 88889999999999999999999999999999999999999988764
No 290
>3mqq_A Transcriptional regulator, LUXR family; PAS domain, PSI, MCSG, structural genomics, center for structural genomics; 1.65A {Burkholderia thailandensis} PDB: 3mqo_A
Probab=99.59 E-value=2e-15 Score=140.26 Aligned_cols=115 Identities=16% Similarity=0.177 Sum_probs=94.5
Q ss_pred ccHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCC-HHHHHHHHHHHHcCCcEEEEE
Q 002356 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETD-PATVRKIRAAIDNQTDVTVQL 550 (931)
Q Consensus 472 ~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~-~~~~~~l~~~l~~~~~~~~e~ 550 (931)
.+|+.+|++++++|++ |.+|. |+++|++|++++||++++++|+++..+.+++.. ......+...+..+..+..|+
T Consensus 3 ~~~~~~~~~~~~~i~~-~~~g~---i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 78 (120)
T 3mqq_A 3 IDYKTAFHLAPIGLVL-SRDRV---IEDCNDELAAIFRCARADLIGRSFEVLYPSSDEFERIGERISPVMIAHGSYADDR 78 (120)
T ss_dssp CCHHHHHHHCSSEEEE-EETTE---EEEECHHHHHHTTSCHHHHTTCBGGGGSSSHHHHHHHHHHHHHHHHHHSCEEEEE
T ss_pred chHHHHHhcCCceEEE-ecCCE---EHHHHHHHHHHhCcCHHHhCCCchhhccCChhhHHHHHHHHHHHHhcCCcceEEE
Confidence 4589999999999975 66777 999999999999999999999998777665432 334555666677778889999
Q ss_pred EEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccc
Q 002356 551 INYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (931)
Q Consensus 551 ~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~ 591 (931)
+++++||+.+|+.++..|+ +.+|...+++++++|||++|+
T Consensus 79 ~~~~~dG~~~~~~~~~~~~-~~~~~~~~~v~~~~DITerk~ 118 (120)
T 3mqq_A 79 IMKRAGGELFWCHVTGRAL-DRTAPLAAGVWTFEDLSATRR 118 (120)
T ss_dssp EEECTTSCEEEEEEEEEES-STTSTTSSEEEEEEESCC---
T ss_pred EEEeCCCCEEEEEEEEEEC-CCCCCceeEEEEEEcccHhhc
Confidence 9999999999999999999 556666789999999999997
No 291
>2vv6_A FIXL, sensor protein FIXL; signaling protein, transferase, phosphoprotein, nitrogen FIX PER-ARNT-SIM, metal-binding, PAS, iron, heme; HET: HEM; 1.5A {Bradyrhizobium japonicum} PDB: 1xj6_A* 1xj4_A* 2vv7_A* 2vv8_A* 1lsw_A* 1dp8_A* 1dp9_A* 1drm_A* 1lsv_A* 1dp6_A* 1lsx_A* 1lt0_A* 1y28_A* 2cmn_A* 1xj3_A* 1xj2_A* 2owh_A* 2owj_A*
Probab=99.58 E-value=5.9e-15 Score=136.94 Aligned_cols=113 Identities=18% Similarity=0.232 Sum_probs=79.9
Q ss_pred hcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCc----EEEEEEEEec
Q 002356 197 TFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS----YCGRLLNYKK 272 (931)
Q Consensus 197 ~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~----~~~e~~~~~k 272 (931)
+++++|+++|. +|+|+++|++|++++||+.+|++|+++..+.++.........+......+.. ...++..+++
T Consensus 1 ~~~d~i~~~d~---~g~i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (119)
T 2vv6_A 1 TIPDAMIVIDG---HGIIQLFSTAAERLFGWSELEAIGQNVNILMPEPDRSRHDSYISRYRTTSDPHIIGIGRIVTGKRR 77 (119)
T ss_dssp -CCCEEEEEET---TSBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHHHHHHHCCCSSTTTCEEEEEECT
T ss_pred CCcceEEEECC---CCeEEEEhHHHHHHhCCCHHHHcCCCHHHhCCchHHHHHHHHHHHHhcCCCcccCCCceEEEEEeC
Confidence 36789999998 7889999999999999999999999988776665443333344444444332 2346677899
Q ss_pred CCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhh
Q 002356 273 DGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (931)
Q Consensus 273 dG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (931)
||+.+|++++++|+.+. ...+++++++|||++|++|++|+
T Consensus 78 dG~~~~~~~~~~~~~~~--~~~~~~~~~~DITerk~~e~~l~ 117 (119)
T 2vv6_A 78 DGTTFPMHLSIGEMQSG--GEPYFTGFVRDLTEHQQTQARLQ 117 (119)
T ss_dssp TSCEEEEEEEEEEEEET--TEEEEEEEEEECC----------
T ss_pred CCCEEEEEEEEEEEEEC--CeEEEEEEEEEcHHHHHHHHHHH
Confidence 99999999999999864 34578999999999999999876
No 292
>3lyx_A Sensory BOX/ggdef domain protein; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Colwellia psychrerythraea}
Probab=99.58 E-value=1.8e-14 Score=131.41 Aligned_cols=120 Identities=18% Similarity=0.298 Sum_probs=107.7
Q ss_pred chHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEE
Q 002356 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (931)
Q Consensus 186 ~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~ 265 (931)
+.++.++.++++++++++++|. +|+|+++|+++++++|++.++++|+++..+.+++........+...+..+..+..
T Consensus 4 ~~~~~~~~~~~~~~~~i~~~d~---~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (124)
T 3lyx_A 4 DILKQRAKAFDYVFDAIVVTDL---QGFIIDWNKGSETLYGYSKEQAIGQPVNMLHVPGDTEHITSEVISAVENQGKWTG 80 (124)
T ss_dssp CHHHHHHHGGGTCSSEEEEEET---TCBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTTHHHHHHHHHHHHHHTSCEEE
T ss_pred hHHHHHHHHHhhcCceEEEECC---CCcEeehhhHHHHHhCCCHHHHcCCCHHHhcCcchhhHHHHHHHHHHHcCCcccc
Confidence 4567899999999999999998 7789999999999999999999999988776766666667778888888988989
Q ss_pred EEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhH
Q 002356 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308 (931)
Q Consensus 266 e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~ 308 (931)
++...+++|..+|+.+++.|+.+.+|.+.+++++++|||++|+
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~ 123 (124)
T 3lyx_A 81 EIRMLHKDGHIGWIESMCVPIYGENYQMVGALGINRDITKRKK 123 (124)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECSTTCEEEEEEEEEECSCC--
T ss_pred eEEEEccCCCEEEEEEEEEEEECCCCCEEEEEEEEecchhhhc
Confidence 9999999999999999999999999999999999999999876
No 293
>3k3c_A Protein RV1364C/MT1410; sensor, PAS, signal transduction, fatty-acid binding, sigma regulator, signaling protein; HET: PLM; 1.62A {Mycobacterium tuberculosis} PDB: 3k3d_A
Probab=99.58 E-value=2.2e-15 Score=146.92 Aligned_cols=125 Identities=10% Similarity=0.099 Sum_probs=105.8
Q ss_pred cchHHHHHHHHHhcCCcEEEEe-CCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcE
Q 002356 185 PRVSDIVKDALSTFQQTFVVSD-ATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (931)
Q Consensus 185 ~~~~~~~~~ile~~~~~i~v~D-~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~ 263 (931)
...++.|+.++++++++|+++| . +|+|+++|++|++++||+ +++|+++..++++.........+..++..|...
T Consensus 13 ~~~~~~~~~~~~~~~~~i~~~d~~---~~~i~~~N~~~~~~~g~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 87 (158)
T 3k3c_A 13 VGAAEDVRRIFEHIPAILVGLEGP---DHRFVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQ 87 (158)
T ss_dssp TCCHHHHHHHHHHCSSEEEEEETT---TTEEEEECHHHHHHCTTC--CSTTSBHHHHSGGGGGTTHHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHHhcCCceEEEEECC---CcEeHHHHHHHHHHcCCc--hhcCCcHHHhCCchhHHHHHHHHHHHHHhCCcc
Confidence 4455789999999999999999 7 888999999999999999 999999887777766556677888888888875
Q ss_pred EEEEE-E--Ee-cC-CcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhh
Q 002356 264 CGRLL-N--YK-KD-GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (931)
Q Consensus 264 ~~e~~-~--~~-kd-G~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (931)
..+.. . .+ .+ |..+|+.+++.|+++.+|.+.|++++++|||++|++|++|+
T Consensus 88 ~~~~~~~~~~~~~~~g~~~~~~~~~~pi~~~~g~~~g~~~~~~DITe~k~~e~~l~ 143 (158)
T 3k3c_A 88 SGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQAAE 143 (158)
T ss_dssp EEEEEEEEEESSSSCEEEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHHHHHH
T ss_pred cccceeEEeccCCCCcceEEEEEEEEEeECCCCCEEEEEEEEEehhHHHHHHHHHH
Confidence 54322 2 22 22 77899999999999999999999999999999999999986
No 294
>3nja_A Probable ggdef family protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.37A {Chromobacterium violaceum}
Probab=99.57 E-value=8.6e-15 Score=135.14 Aligned_cols=117 Identities=13% Similarity=0.021 Sum_probs=96.4
Q ss_pred ccHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcC--CCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEE
Q 002356 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILG--RNCRFLQGPETDPATVRKIRAAIDNQTDVTVQ 549 (931)
Q Consensus 472 ~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG--~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e 549 (931)
..|+.++++++++++++|.+|. ++++|+++++++||+.++++| ..+..+++|++.......+...+..+..+..+
T Consensus 7 ~~l~~~~~~~~~~i~~~d~~~~---~~~~n~~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~e 83 (125)
T 3nja_A 7 KLLHTAESDAGIGSWVLHMESG---RLEWSQAVHDIFGTDSATFDATEDAYFQRVHPDDRARVRRELDRHVLGDRPFDVE 83 (125)
T ss_dssp ----------CCEEEEEETTTT---EEEECHHHHHHHTCCTTTCCCBHHHHHHHBCTTTHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHhCCeeEEEEEcCCC---cEEECHHHHHHhCCCcccccccHHHHHhhcChhHHHHHHHHHHHHHhcCCCceEE
Confidence 4588999999999999999888 999999999999999999999 44556778888888888888888888889999
Q ss_pred EEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccc
Q 002356 550 LINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (931)
Q Consensus 550 ~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~ 591 (931)
+++.+++|..+|+.++..|+++.+|.+.+++|+++|||++|+
T Consensus 84 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~g~~~DITe~k~ 125 (125)
T 3nja_A 84 YRIVRPDGQVRELLERNHIQRQASGQVDHLWGTVIDMTEHKQ 125 (125)
T ss_dssp EEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCC---
T ss_pred EEEECCCCCEEEEEEeeEEEECCCCCEEEEEEEEEecccccC
Confidence 999999999999999999999999999999999999999985
No 295
>2v0u_A NPH1-1, LOV2; kinase, transferase, ATP-binding, serine/threonine-protein kinase, light-induced signal trans phototropin1, nucleotide-binding; HET: FMN; 1.40A {Avena sativa} PDB: 2v0w_A* 2v1b_A* 2v1a_A* 1jnu_A* 1g28_A*
Probab=99.57 E-value=3.2e-14 Score=134.07 Aligned_cols=139 Identities=84% Similarity=1.238 Sum_probs=118.7
Q ss_pred HHHHHhhccceEEEEcC---CCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEE
Q 002356 474 LATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQL 550 (931)
Q Consensus 474 l~~i~e~~~d~I~v~D~---~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~ 550 (931)
|+.++++++++++++|. +|. |+++|+++++++||+.++++|+++..+.+++........+...+..+..+..++
T Consensus 4 l~~~~~~~~~~i~~~d~~~~~~~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (146)
T 2v0u_A 4 LATTLERIEKNFVITDPRLPDNP---IIFASDSFLQLTEYSREEILGRNCRFLQGPETDRATVRKIRDAIDNQTEVTVQL 80 (146)
T ss_dssp CCCTGGGSSSCEEEECTTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHhcCCCcEEEEcCCCCCce---EEEEcHHHHHHHCcCHHHHcCCCHHHhcCCcCChHHHHHHHHHHhcCCCcceEE
Confidence 56788999999999999 888 999999999999999999999998888888888888888888888888999999
Q ss_pred EEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccccccCCchhhHHHHHHHHHhhhhhhhhhhcc
Q 002356 551 INYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVKE 622 (931)
Q Consensus 551 ~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e~~~~~~~~~~e~~~~vk~~~~~v~~a~~e 622 (931)
...+++|..+|+.++..|+.+.+|.+.+++++++|||++|+. +...+.....+.+...+..++++
T Consensus 81 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 145 (146)
T 2v0u_A 81 INYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRD-------AAEREGVMLIKKTAENIDEAAKE 145 (146)
T ss_dssp EEECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCH-------HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEecCCcEEEEEEEEEEeECCCCCEEEEEEEEeechHHHHH-------HHHHHHHHHHHHHHhccHhhHhc
Confidence 999999999999999999999999999999999999999872 22333444555555555555543
No 296
>2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca}
Probab=99.56 E-value=4.2e-14 Score=131.22 Aligned_cols=107 Identities=15% Similarity=0.153 Sum_probs=87.2
Q ss_pred ccHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEE
Q 002356 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (931)
Q Consensus 472 ~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~ 551 (931)
..|+.++++++++|+++|.+|+ |+++|++|++++||+++|++|+++..+.++.... ........+..+..+..|.+
T Consensus 11 ~~~~~l~e~~~d~i~~~d~~g~---i~~vN~a~~~l~Gy~~~el~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~~ 86 (117)
T 2r78_A 11 NAYRALFEHAIDGIFIMDAEGH---YLDVNPAICSAIGYTRDEFLALDWGVLSRGVDSG-WAAASLARIVGGEPLREERT 86 (117)
T ss_dssp HHHHHHHHHCSSEEEEECTTSB---EEEECHHHHHHHCCCHHHHTTCBTTTTTTCSTTS-HHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHhcCCceEEEECCCCC---EEEecHHHHHHHCcCHHHHcCCCHHHhCCccchh-HHHHHHHHHHcCCcEEEEEE
Confidence 3499999999999999999888 9999999999999999999999876665443322 23334555667777888999
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCC
Q 002356 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (931)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDIT 587 (931)
++++||+.+|+.+++.|+. +|. ++++++|||
T Consensus 87 ~~~kdG~~~~v~~~~~~~~--~g~---~~~i~~DIT 117 (117)
T 2r78_A 87 VWTRNGDQLTVELSAHLLP--DGK---ILGIARDVS 117 (117)
T ss_dssp EECTTSCEEEEEEEEEECT--TSC---EEEEEEC--
T ss_pred EEecCCCEEEEEEEEEEec--CCe---EEEEEEeCC
Confidence 9999999999999999985 565 678999998
No 297
>2z6d_A Phototropin-2; PAS-fold, LOV-fold, alternative splicing, ATP-binding, chromophore, flavoprotein, FMN, kinase, membrane, nucleotide-binding; HET: FMN; 2.00A {Arabidopsis thaliana} PDB: 2z6c_A*
Probab=99.55 E-value=9.9e-14 Score=127.37 Aligned_cols=119 Identities=44% Similarity=0.843 Sum_probs=107.4
Q ss_pred ccHHHHHhhccceEEEEc---CCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEE
Q 002356 472 IDLATTLERIEKNFVITD---PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (931)
Q Consensus 472 ~~l~~i~e~~~d~I~v~D---~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~ 548 (931)
..++.++++++++++++| .+|. |+++|+++++++|++.++++|+++..+.++.........+...+..+..+..
T Consensus 6 ~~~~~~~~~~~~~i~~~d~~d~~~~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (130)
T 2z6d_A 6 QELKTALSTLQQTFVVSDATQPHCP---IVYASSGFFTMTGYSSKEIVGRNCRFLQGPDTDKNEVAKIRDCVKNGKSYCG 82 (130)
T ss_dssp -CHHHHHHHTTCEEEEEETTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhcccceeeeeccCCCCc---EEEecHHHHHHhCcCHHHHcCCChhhccCCCCCchHHHHHHHHHHcCCccee
Confidence 348999999999999999 8888 9999999999999999999999988888888888778888888888888888
Q ss_pred EEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccccc
Q 002356 549 QLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (931)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e 593 (931)
++...+++|..+|+.+...|+.+.+|.+.+++++++|||++|++|
T Consensus 83 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~e 127 (130)
T 2z6d_A 83 RLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQVEVSKYTEGV 127 (130)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCTTC---
T ss_pred EEEEEcCCCcEEEEEEEEEEEECCCCCeeEEEEEEecchHHHHhh
Confidence 999999999999999999999999999999999999999999854
No 298
>3bwl_A Sensor protein; structural genomics, APC87707.1, PAS domain, HTR-like protei protein structure initiative; HET: MSE I3A; 1.73A {Haloarcula marismortui atcc 43049}
Probab=99.55 E-value=1.4e-14 Score=135.32 Aligned_cols=124 Identities=17% Similarity=0.158 Sum_probs=94.7
Q ss_pred cccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhc--CCCCCCCCCCCCChHHH
Q 002356 173 EMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVV--GRNCRFLQGAGTDPEDV 250 (931)
Q Consensus 173 dit~~~~~e~~l~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEll--G~~~~~l~~~~~~~~~~ 250 (931)
+||++++++++|+++++.|+.++++++++|+++|. +|+|+++|++|++++||+.+|++ |+++..+.+ +.....
T Consensus 1 ~~t~r~~~e~~L~~~~~~~~~l~e~~~~~i~~~d~---~g~i~~~N~a~~~~~G~~~~el~g~g~~~~~~~~--~~~~~~ 75 (126)
T 3bwl_A 1 SNAERKRREKRLEETSSRLEALFENSPDMIDVLDA---DGTICEVNQRFCAELGYDESEVLGRSIWEFDLMF--DAEDVQ 75 (126)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCSSEEEEECT---TCBEEEECHHHHHHHTCCGGGTTTSBGGGTBTTC--CHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhhCCcEEEEEcC---CCCEEEEcHHHHHHhCCCHHHHhhCCCchhhccC--CHHHHH
Confidence 57899999999999999999999999999999998 78899999999999999999994 566555544 222221
Q ss_pred HHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002356 251 AKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (931)
Q Consensus 251 ~~l~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (931)
..+. ....+.....+...+++||+.+|+.++..++.+ +|. .+++++++|||
T Consensus 76 ~~~~-~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~-~~~-~~~~~~~~DIT 126 (126)
T 3bwl_A 76 TQLS-GFSVDERRKFEGLYERRDGSTMSVEVHLLRFNL-EGE-DRFLAISRDIT 126 (126)
T ss_dssp HHHH-TCCTTCEEEEEEEEECTTSCEEEEEEEEEEEEE-TTE-EEEEEEEEEC-
T ss_pred HHHH-HHhcCCCcceEEEEEeCCCCEEEEEEEeEEEec-CCc-EEEEEEEEeCC
Confidence 1111 112233445566778999999999998888743 344 46789999998
No 299
>2wkq_A NPH1-1, RAS-related C3 botulinum toxin substrate 1; transferase, cell adhesion, nucleotide-binding, protein engineering, RAS superfamily LOV2; HET: GTP FMN; 1.60A {Avena sativa} PDB: 2wkr_A* 2wkp_A*
Probab=99.54 E-value=3.4e-14 Score=157.39 Aligned_cols=122 Identities=39% Similarity=0.789 Sum_probs=112.0
Q ss_pred HHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEec
Q 002356 193 DALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKK 272 (931)
Q Consensus 193 ~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~k 272 (931)
.++++++++|+++|....+|+|+|+|++|++++||+++|++|+++..+.+++........++..+..+..+..+++.+++
T Consensus 15 ~~~~~~~~~i~~~D~~~~~g~i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 94 (332)
T 2wkq_A 15 TTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNARFLQGPETDRATVRKIRDAIDNQTEVTVQLINYTK 94 (332)
T ss_dssp CCGGGCCSEEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEEECT
T ss_pred hHhhcCCCcEEEecCCCCCCCEEEeehHHHHHhCCCHHHHcCCCchhhcCCCCCHHHHHHHHHHHHcCCeeEEEEEEEcC
Confidence 35789999999999844467799999999999999999999999988888888888888899999999999999999999
Q ss_pred CCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhh
Q 002356 273 DGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (931)
Q Consensus 273 dG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (931)
||+.+|+.+++.|++|.+|.+.+++++++|||++++.+++++
T Consensus 95 dG~~~~~~~~~~pi~d~~g~~~~~v~~~~DITe~k~~e~~~~ 136 (332)
T 2wkq_A 95 SGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRDAAERE 136 (332)
T ss_dssp TCCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCHHHHHH
T ss_pred CCCEEEEeeEEEEeEcCCCCEEEEEEEeccCchhhhhhhhcc
Confidence 999999999999999999999999999999999999887765
No 300
>3lyx_A Sensory BOX/ggdef domain protein; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Colwellia psychrerythraea}
Probab=99.54 E-value=6.1e-14 Score=127.86 Aligned_cols=116 Identities=20% Similarity=0.224 Sum_probs=104.9
Q ss_pred cHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEE
Q 002356 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (931)
Q Consensus 473 ~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~ 552 (931)
.++.++++++++++++|.+|. |+++|+++++++|++.++++|++...+.+++........+...+..+..+..+...
T Consensus 8 ~~~~~~~~~~~~i~~~d~~~~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (124)
T 3lyx_A 8 QRAKAFDYVFDAIVVTDLQGF---IIDWNKGSETLYGYSKEQAIGQPVNMLHVPGDTEHITSEVISAVENQGKWTGEIRM 84 (124)
T ss_dssp HHHHGGGTCSSEEEEEETTCB---EEEECHHHHHHHCCCHHHHTTSBGGGGSCTTTHHHHHHHHHHHHHHTSCEEEEEEE
T ss_pred HHHHHHhhcCceEEEECCCCc---EeehhhHHHHHhCCCHHHHcCCCHHHhcCcchhhHHHHHHHHHHHcCCcccceEEE
Confidence 488999999999999999888 99999999999999999999999886767766666677788888888889999999
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccc
Q 002356 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (931)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~ 591 (931)
.+++|..+|+.+++.|+.+.+|.+.+++++++|||++|+
T Consensus 85 ~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~ 123 (124)
T 3lyx_A 85 LHKDGHIGWIESMCVPIYGENYQMVGALGINRDITKRKK 123 (124)
T ss_dssp ECTTSCEEEEEEEEEEEECSTTCEEEEEEEEEECSCC--
T ss_pred EccCCCEEEEEEEEEEEECCCCCEEEEEEEEecchhhhc
Confidence 999999999999999999999999999999999999986
No 301
>2vv6_A FIXL, sensor protein FIXL; signaling protein, transferase, phosphoprotein, nitrogen FIX PER-ARNT-SIM, metal-binding, PAS, iron, heme; HET: HEM; 1.5A {Bradyrhizobium japonicum} PDB: 1xj6_A* 1xj4_A* 2vv7_A* 2vv8_A* 1lsw_A* 1dp8_A* 1dp9_A* 1drm_A* 1lsv_A* 1dp6_A* 1lsx_A* 1lt0_A* 1y28_A* 2cmn_A* 1xj3_A* 1xj2_A* 2owh_A* 2owj_A*
Probab=99.54 E-value=2.4e-14 Score=132.74 Aligned_cols=110 Identities=18% Similarity=0.191 Sum_probs=81.5
Q ss_pred ccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCc----EEEEEEEEecC
Q 002356 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD----VTVQLINYTKS 556 (931)
Q Consensus 481 ~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~----~~~e~~~~~kd 556 (931)
++++|+++|.+|. |+++|++|++++||+++|++|+++..+++++........+......+.. ...++..+++|
T Consensus 2 ~~d~i~~~d~~g~---i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 78 (119)
T 2vv6_A 2 IPDAMIVIDGHGI---IQLFSTAAERLFGWSELEAIGQNVNILMPEPDRSRHDSYISRYRTTSDPHIIGIGRIVTGKRRD 78 (119)
T ss_dssp CCCEEEEEETTSB---EEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHHHHHHHCCCSSTTTCEEEEEECTT
T ss_pred CcceEEEECCCCe---EEEEhHHHHHHhCCCHHHHcCCCHHHhCCchHHHHHHHHHHHHhcCCCcccCCCceEEEEEeCC
Confidence 6899999999888 9999999999999999999999988887766544433344444433332 24577788999
Q ss_pred CcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccccccc
Q 002356 557 GKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (931)
Q Consensus 557 G~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e~~ 595 (931)
|+.+|+.+++.|+.+. ...+++++++|||++|++|+.
T Consensus 79 G~~~~~~~~~~~~~~~--~~~~~~~~~~DITerk~~e~~ 115 (119)
T 2vv6_A 79 GTTFPMHLSIGEMQSG--GEPYFTGFVRDLTEHQQTQAR 115 (119)
T ss_dssp SCEEEEEEEEEEEEET--TEEEEEEEEEECC--------
T ss_pred CCEEEEEEEEEEEEEC--CeEEEEEEEEEcHHHHHHHHH
Confidence 9999999999999864 335689999999999986543
No 302
>3mxq_A Sensor protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.78A {Vibrio cholerae o1 biovar el tor}
Probab=99.54 E-value=7.9e-15 Score=143.39 Aligned_cols=124 Identities=14% Similarity=0.182 Sum_probs=99.0
Q ss_pred cccchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCc
Q 002356 183 GLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS 262 (931)
Q Consensus 183 ~l~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~ 262 (931)
++++++.+|+++++++++||+++|. +|+|++||+++++++|++.+|++|+++..+++. ........+++++..|.+
T Consensus 16 ~~~~~~~~l~~il~~~~~gi~v~D~---~g~I~~~N~a~~~~~G~~~~eviG~~~~~~~p~-~~~~~~~~l~~vl~~G~~ 91 (152)
T 3mxq_A 16 AMAKSRLLLSELLDQLSFALCIVRN---DYVIVKVNEYFESRVIFDGETMQGKNILELFPE-SADYLKRKIDTALVIESS 91 (152)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEET---TSBEEEECHHHHHTSSSCHHHHTTSBHHHHSGG-GHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEcC---CCEEEEECHHHHHHHCcCHHHHCCCCHHHhcCC-hHHHHHHHHHHHHhcCCc
Confidence 5777778899999999999999998 888999999999999999999999999877776 555566778888988875
Q ss_pred EEEE---------EEE---EecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHH
Q 002356 263 YCGR---------LLN---YKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGA 310 (931)
Q Consensus 263 ~~~e---------~~~---~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e 310 (931)
.... +.. ..++|..+|..++++|++|++|++.|++.+++|||+++.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti~Pl~d~~G~v~gv~~ii~DVTe~~~a~ 151 (152)
T 3mxq_A 92 SFSSWEQKPHLLPFKSSRPVSGEEEQMYQNLEVIPIHSEDGTIEHVCLCVYDVTIQASQQ 151 (152)
T ss_dssp EEEECCSSSCSSCC----------CCEEEEEEEEEEECTTSCEEEEEEEEEEEECC----
T ss_pred eeeecccccccccccccCCCCCCCcEEEEEEEEEEEECCCCCEEEEEEEEEECCHHHhcc
Confidence 3321 111 23577888999999999999999999999999999998753
No 303
>2wkq_A NPH1-1, RAS-related C3 botulinum toxin substrate 1; transferase, cell adhesion, nucleotide-binding, protein engineering, RAS superfamily LOV2; HET: GTP FMN; 1.60A {Avena sativa} PDB: 2wkr_A* 2wkp_A*
Probab=99.53 E-value=5.1e-14 Score=155.99 Aligned_cols=117 Identities=88% Similarity=1.291 Sum_probs=108.9
Q ss_pred HHHHhhccceEEEEcC---CCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEE
Q 002356 475 ATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (931)
Q Consensus 475 ~~i~e~~~d~I~v~D~---~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~ 551 (931)
..++++++++|+++|. +|+ |+++|++|++++||+++|++|+++..+.+++......+.+...+..+..+..+++
T Consensus 14 ~~~~~~~~~~i~~~D~~~~~g~---i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 90 (332)
T 2wkq_A 14 ATTLERIEKNFVITDPRLPDNP---IIFASDSFLQLTEYSREEILGRNARFLQGPETDRATVRKIRDAIDNQTEVTVQLI 90 (332)
T ss_dssp CCCGGGCCSEEEEECTTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HhHhhcCCCcEEEecCCCCCCC---EEEeehHHHHHhCCCHHHHcCCCchhhcCCCCCHHHHHHHHHHHHcCCeeEEEEE
Confidence 3467899999999999 888 9999999999999999999999999898988888888889999999999999999
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccccc
Q 002356 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLR 594 (931)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e~ 594 (931)
.+++||+.+|+.+++.|++|.+|++.+++++++|||++|+.+.
T Consensus 91 ~~~~dG~~~~~~~~~~pi~d~~g~~~~~v~~~~DITe~k~~e~ 133 (332)
T 2wkq_A 91 NYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRDAA 133 (332)
T ss_dssp EECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCHHH
T ss_pred EEcCCCCEEEEeeEEEEeEcCCCCEEEEEEEeccCchhhhhhh
Confidence 9999999999999999999999999999999999999998543
No 304
>3luq_A Sensor protein; PAS, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: PGE; 2.49A {Geobacter sulfurreducens}
Probab=99.53 E-value=7.4e-14 Score=126.66 Aligned_cols=112 Identities=13% Similarity=0.142 Sum_probs=92.7
Q ss_pred HHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEE-E
Q 002356 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG-R 266 (931)
Q Consensus 188 ~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~-e 266 (931)
++.|+.++++++++++++|. +|+|+++|++|++++||+.++++|+++..++ ++........+..++. +..... +
T Consensus 2 e~~~~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~ 76 (114)
T 3luq_A 2 DERLRLFTEHAPAALAMFDR---EMRYLAVSRRWREDYGLGDGDILGMSHYDIF-PEIGEEWKSVHRRGLA-GEVIRVEE 76 (114)
T ss_dssp CHHHHHHHHTCSSEEEEEET---TCBEEEECHHHHHHTTCCSSCCTTCBHHHHC-TTCCHHHHHHHHHHHT-TCCEEEEE
T ss_pred hHHHHHHHhcCCceEEEEcC---CcEEEEECHHHHHHHCCCHHHHcCCcHHHHC-CccHHHHHHHHHHHhc-CCcceeee
Confidence 46789999999999999998 7889999999999999999999999987666 4455555555555555 444444 4
Q ss_pred EEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002356 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (931)
Q Consensus 267 ~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (931)
....+++|..+|+.++..|+++.+|.+.|++++++|||
T Consensus 77 ~~~~~~~g~~~~~~~~~~p~~~~~g~~~~~~~~~~DIT 114 (114)
T 3luq_A 77 DCFVRADGRTQWLRWEVRPWYEGEGRVGGVVIFTEDIT 114 (114)
T ss_dssp EEEEC--CCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred eEEEcCCCcEEEEEEEEEEeECCCCCEEEEEEEEeeCC
Confidence 47789999999999999999999999999999999997
No 305
>3h9w_A Diguanylate cyclase with PAS/PAC sensor; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.90A {Marinobacter aquaeolei}
Probab=99.52 E-value=1.8e-14 Score=132.60 Aligned_cols=110 Identities=15% Similarity=0.103 Sum_probs=97.3
Q ss_pred ccceEEEEcC-CCCCCCEEecCHHHHHHcCCChhhhcCCC-CCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCc
Q 002356 481 IEKNFVITDP-RLPDNPIIFASDSFLELTEYSREEILGRN-CRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGK 558 (931)
Q Consensus 481 ~~d~I~v~D~-~G~d~~I~~vN~a~~~l~Gys~eEllG~~-~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~ 558 (931)
+++++|.+|. .|. ++|+|+++++++||++++++|.. +..++||++.......+...+..+..+..|++++++||+
T Consensus 2 a~~giw~~d~~~~~---~~~~n~~~~~l~G~~~~e~~~~~~~~~~ihpdd~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~ 78 (115)
T 3h9w_A 2 TKAIPWKINWQTMA---FEYIGPQIEALLGWPQGSWKSVEDWATRMHPEDQEWVVNFCVKQSECGVDHEADYRALHRDGH 78 (115)
T ss_dssp -CCEEEEEETTTTE---EEEECTHHHHHHCSCGGGCCBHHHHHHSBCHHHHHHHHHHHHHHHHTTCCEEEEEEEECTTSC
T ss_pred cceEEEEEEcCCCc---EEEEChhHHHHhCCChHHccCHHHHHHhcCHHHHHHHHHHHHHHHhcCCcccEEEEEEcCCCC
Confidence 5789999994 555 99999999999999999999832 345789998888888888888888889999999999999
Q ss_pred EEEEEEEEEeeecCCCCEEEEEEEEecCCcccccc
Q 002356 559 KFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (931)
Q Consensus 559 ~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e 593 (931)
.+|+..++.|++|++|++++++|++.|||++|++|
T Consensus 79 ~~w~~~~~~~~~d~~G~~~~~~G~~~Dit~~k~~~ 113 (115)
T 3h9w_A 79 YVWIRDVVHVVRDDSGEVEALIGFMFDISLEHHHH 113 (115)
T ss_dssp EEEEEEEEEEEECTTSCEEEEEEEEEECGGGGC--
T ss_pred EEEEEEEEEEEECCCCCEEEEEEEEeccCcccccc
Confidence 99999999999999999999999999999999865
No 306
>3h9w_A Diguanylate cyclase with PAS/PAC sensor; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.90A {Marinobacter aquaeolei}
Probab=99.52 E-value=2.2e-14 Score=132.08 Aligned_cols=112 Identities=13% Similarity=0.100 Sum_probs=97.2
Q ss_pred cCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCC-CCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcE
Q 002356 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRN-CRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTP 276 (931)
Q Consensus 198 ~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~-~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~ 276 (931)
+++++|.+|.. +|+++|+|+++++++||++++++|.. +..+++|++.......+...+..+..+..+++.+++||+.
T Consensus 2 a~~giw~~d~~--~~~~~~~n~~~~~l~G~~~~e~~~~~~~~~~ihpdd~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~ 79 (115)
T 3h9w_A 2 TKAIPWKINWQ--TMAFEYIGPQIEALLGWPQGSWKSVEDWATRMHPEDQEWVVNFCVKQSECGVDHEADYRALHRDGHY 79 (115)
T ss_dssp -CCEEEEEETT--TTEEEEECTHHHHHHCSCGGGCCBHHHHHHSBCHHHHHHHHHHHHHHHHTTCCEEEEEEEECTTSCE
T ss_pred cceEEEEEEcC--CCcEEEEChhHHHHhCCChHHccCHHHHHHhcCHHHHHHHHHHHHHHHhcCCcccEEEEEEcCCCCE
Confidence 46889999953 77799999999999999999999832 2357788887888888888999988899999999999999
Q ss_pred EEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHH
Q 002356 277 FWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 311 (931)
Q Consensus 277 ~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~ 311 (931)
+|+..+..|++|++|++.+++|+..|||++|++|+
T Consensus 80 ~w~~~~~~~~~d~~G~~~~~~G~~~Dit~~k~~~~ 114 (115)
T 3h9w_A 80 VWIRDVVHVVRDDSGEVEALIGFMFDISLEHHHHH 114 (115)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEECGGGGC---
T ss_pred EEEEEEEEEEECCCCCEEEEEEEEeccCccccccc
Confidence 99999999999999999999999999999998875
No 307
>3kx0_X Uncharacterized protein RV1364C/MT1410; PAS domain, sensory domain, mycobacteium tuberculos molecule binding domain; 2.30A {Mycobacterium tuberculosis}
Probab=99.52 E-value=3e-14 Score=143.76 Aligned_cols=124 Identities=10% Similarity=0.125 Sum_probs=102.6
Q ss_pred cchHHHHHHHHHhcCCcEEEEe-CCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcE
Q 002356 185 PRVSDIVKDALSTFQQTFVVSD-ATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (931)
Q Consensus 185 ~~~~~~~~~ile~~~~~i~v~D-~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~ 263 (931)
..+++.|+.++++++++++++| . +|+|+++|++|++++||+ +++|+++..++++.........+..++..|...
T Consensus 33 ~~~~~~l~~l~~~~~~~i~~~d~~---~g~i~~~N~a~~~l~G~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 107 (185)
T 3kx0_X 33 VGAAEDVRRIFEHIPAILVGLEGP---DHRFVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQ 107 (185)
T ss_dssp TCCHHHHHHHHHHCSSEEEEEETT---TTEEEEECHHHHHHCCCC--SCTTSBHHHHCTTSCSSSSHHHHHHHHHHCCCE
T ss_pred hhhHHHHHHHHhcCCceEEEEECC---CcEEEEEcHHHHHHcCCc--cccCCcHHHHCCchhhhhHHHHHHHHHHcCCcc
Confidence 4667899999999999999999 7 888999999999999999 999999887777766655667788888888876
Q ss_pred EEEEEEE---ecC--CcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHh
Q 002356 264 CGRLLNY---KKD--GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDK 313 (931)
Q Consensus 264 ~~e~~~~---~kd--G~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L 313 (931)
..+.... +++ |..+|+.+++.|++|.+|.+.|++++++|||++|++|+++
T Consensus 108 ~~~~~~~~~~~~~~gg~~~~~~~~~~pi~~~~g~~~g~~~~~~DITerk~~e~~~ 162 (185)
T 3kx0_X 108 SGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQAA 162 (185)
T ss_dssp EEEEEEEC--------CCEEEEEEEEEEECTTSCEEEEEEEEEECHHHHTTCC--
T ss_pred cccceeEEeeccCCCCccEEEEEEEEEEECCCCCEEEEEEEEEeCCHHHHHHHHH
Confidence 6543222 222 7789999999999999999999999999999999999993
No 308
>3k3c_A Protein RV1364C/MT1410; sensor, PAS, signal transduction, fatty-acid binding, sigma regulator, signaling protein; HET: PLM; 1.62A {Mycobacterium tuberculosis} PDB: 3k3d_A
Probab=99.50 E-value=3.9e-14 Score=138.00 Aligned_cols=121 Identities=11% Similarity=0.082 Sum_probs=101.1
Q ss_pred hhhcccHHHHHhhccceEEEEc-CCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcE
Q 002356 468 MRKGIDLATTLERIEKNFVITD-PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDV 546 (931)
Q Consensus 468 l~~~~~l~~i~e~~~d~I~v~D-~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~ 546 (931)
+++...|+.++++++++|+++| .+|+ |+++|++|++++|++ +++|+++..++++.........+...+..+...
T Consensus 13 ~~~~~~~~~~~~~~~~~i~~~d~~~~~---i~~~N~~~~~~~g~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 87 (158)
T 3k3c_A 13 VGAAEDVRRIFEHIPAILVGLEGPDHR---FVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQ 87 (158)
T ss_dssp TCCHHHHHHHHHHCSSEEEEEETTTTE---EEEECHHHHHHCTTC--CSTTSBHHHHSGGGGGTTHHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHHhcCCceEEEEECCCcE---eHHHHHHHHHHcCCc--hhcCCcHHHhCCchhHHHHHHHHHHHHHhCCcc
Confidence 5555679999999999999999 8888 999999999999999 999999888887766656677788888777775
Q ss_pred EEEEE-E--Eec-C-CcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccccc
Q 002356 547 TVQLI-N--YTK-S-GKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (931)
Q Consensus 547 ~~e~~-~--~~k-d-G~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e 593 (931)
..+.. . .+. + |..+|+.+++.|+++.+|.+.+++++++|||++|++|
T Consensus 88 ~~~~~~~~~~~~~~~g~~~~~~~~~~pi~~~~g~~~g~~~~~~DITe~k~~e 139 (158)
T 3k3c_A 88 SGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRAR 139 (158)
T ss_dssp EEEEEEEEEESSSSCEEEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHH
T ss_pred cccceeEEeccCCCCcceEEEEEEEEEeECCCCCEEEEEEEEEehhHHHHHH
Confidence 54433 2 222 2 7789999999999999999999999999999999843
No 309
>3sw1_A Sensory box protein; light-oxygen-voltage, LOV, PAS, signaling protein; HET: FMN; 2.63A {Pseudomonas putida}
Probab=99.50 E-value=7.6e-14 Score=136.09 Aligned_cols=118 Identities=33% Similarity=0.571 Sum_probs=109.5
Q ss_pred ccHHHHHhhccceEEEEcCCC---CCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEE
Q 002356 472 IDLATTLERIEKNFVITDPRL---PDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (931)
Q Consensus 472 ~~l~~i~e~~~d~I~v~D~~G---~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~ 548 (931)
..++.++++++++|+++|.+| . |+++|++|++++||+.++++|+++..+.++.........+...+..+..+..
T Consensus 25 ~~~~~i~~~~~~~i~~~d~~~~~~~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (162)
T 3sw1_A 25 QLLQSMVDASNDGIVVAEKEGDDTI---LIYVNAAFEYLTGYSRDEILYQDCRFLQGDDRDQLGRARIRKAMAEGRPCRE 101 (162)
T ss_dssp HHHHHHHHTCSSEEEEEEEETTEEE---EEEECHHHHHHHTCCHHHHTTSBGGGGTTTCCCCHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHhhccCcEEEEeCCCCccE---EEEECHHHHHHHCCCHHHHcCCCcceecCCCcCHHHHHHHHHHHhcCCCCcc
Confidence 348999999999999999988 7 9999999999999999999999988888888777777888888888999999
Q ss_pred EEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccc
Q 002356 549 QLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (931)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~ 592 (931)
++...+++|..+|+.+++.|+.+.+|.+.+++++++|||++|+.
T Consensus 102 ~~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DiTe~k~~ 145 (162)
T 3sw1_A 102 VLRNYRKDGSAFWNELSITPVKSDFDQRTYFIGIQKDVSRQVEL 145 (162)
T ss_dssp EEEEECTTCCEEEEEEEEEEEECSSSSCEEEEEEEEECHHHHHH
T ss_pred eEEEECCCCCEEEEEEEEEEeecCCCCEEEEEEEEEeCcHHHHH
Confidence 99999999999999999999999999999999999999999984
No 310
>3bwl_A Sensor protein; structural genomics, APC87707.1, PAS domain, HTR-like protei protein structure initiative; HET: MSE I3A; 1.73A {Haloarcula marismortui atcc 43049}
Probab=99.50 E-value=1.6e-13 Score=128.05 Aligned_cols=123 Identities=15% Similarity=0.127 Sum_probs=93.8
Q ss_pred CchhhHHHHHhhhhc-ccHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhh--cCCCCCCCCCCCCCHHHH
Q 002356 457 DSVDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEI--LGRNCRFLQGPETDPATV 533 (931)
Q Consensus 457 dv~~r~~~~~~l~~~-~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEl--lG~~~~~l~~~~~~~~~~ 533 (931)
++|+|++.+++|++. ..|+.++++++++|+++|.+|. |+++|++|++++||+++|+ +|++...+.+ +.....
T Consensus 1 ~~t~r~~~e~~L~~~~~~~~~l~e~~~~~i~~~d~~g~---i~~~N~a~~~~~G~~~~el~g~g~~~~~~~~--~~~~~~ 75 (126)
T 3bwl_A 1 SNAERKRREKRLEETSSRLEALFENSPDMIDVLDADGT---ICEVNQRFCAELGYDESEVLGRSIWEFDLMF--DAEDVQ 75 (126)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCSSEEEEECTTCB---EEEECHHHHHHHTCCGGGTTTSBGGGTBTTC--CHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhhCCcEEEEEcCCCC---EEEEcHHHHHHhCCCHHHHhhCCCchhhccC--CHHHHH
Confidence 468999999999776 6799999999999999999888 9999999999999999999 4676666655 222222
Q ss_pred HHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCC
Q 002356 534 RKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (931)
Q Consensus 534 ~~l~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDIT 587 (931)
..+. ....+.....+.++.++||+.+|+.++..++.+ +|. ..++++++|||
T Consensus 76 ~~~~-~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~-~~~-~~~~~~~~DIT 126 (126)
T 3bwl_A 76 TQLS-GFSVDERRKFEGLYERRDGSTMSVEVHLLRFNL-EGE-DRFLAISRDIT 126 (126)
T ss_dssp HHHH-TCCTTCEEEEEEEEECTTSCEEEEEEEEEEEEE-TTE-EEEEEEEEEC-
T ss_pred HHHH-HHhcCCCcceEEEEEeCCCCEEEEEEEeEEEec-CCc-EEEEEEEEeCC
Confidence 2211 112334456677788999999999998888743 444 46789999998
No 311
>3eeh_A Putative light and redox sensing histidine kinase; structural genomic MCSG, protein structure initiative, midwest center for STRU genomics; HET: PG5; 1.95A {Haloarcula marismortui}
Probab=99.49 E-value=6.5e-14 Score=128.31 Aligned_cols=121 Identities=11% Similarity=0.133 Sum_probs=98.0
Q ss_pred ccccccchHHHHHHHHHhcCCcEEEEeCCCCC-CceEEcchHHHHHhCCChhhhcCCC--CCCCCCCCCChHHHHHHHHH
Q 002356 180 KEKGLPRVSDIVKDALSTFQQTFVVSDATKPD-YPIMYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPEDVAKIRET 256 (931)
Q Consensus 180 ~e~~l~~~~~~~~~ile~~~~~i~v~D~~~~d-G~I~~~N~a~~~l~Gys~eEllG~~--~~~l~~~~~~~~~~~~l~~~ 256 (931)
++++|+++++.|+.++++++++++++|. + |+++++|+++++++||+.++++|.. +..+.++++.......+..
T Consensus 2 ~e~~l~~~~~~~~~~~~~~~~~i~~~d~---~~~~i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 77 (125)
T 3eeh_A 2 AKQQAAKSERRVRELTEATNDILWEFTA---DLSEVLVINSAYEDIWGRSVAKLRENPHDFLNGIHPEDRELMKDTMQS- 77 (125)
T ss_dssp --------CHHHHHHHSCCCCEEEEEET---TSSCEEEECTHHHHHHSSCHHHHHHCGGGGGGGBCHHHHHHHHHHHHH-
T ss_pred hHHHHHHHHHHHHHHHhcCCceEEEEEc---CCCcEEEecHHHHHHHCCCHHHHccCcHHHHHhcCHHHHHHHHHHHHH-
Confidence 5677888999999999999999999998 5 7799999999999999999999987 3445555554444444544
Q ss_pred HHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002356 257 LQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (931)
Q Consensus 257 l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (931)
+..+..+..+++.++++|..+|+.++..|+.+.+|.+.+++++++|||
T Consensus 78 ~~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIT 125 (125)
T 3eeh_A 78 LMDGESADVECRVNATEEYQRWVWIQGEPITNDAGETVRVAGFARDIT 125 (125)
T ss_dssp HHTTCCEEEEEEECGGGTTCEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred HHcCCCccEEEEEEcCCCCEEEEEEecEEEECCCCCEEEEEEEEEecC
Confidence 667778888999999999999999999999999999999999999997
No 312
>3luq_A Sensor protein; PAS, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: PGE; 2.49A {Geobacter sulfurreducens}
Probab=99.49 E-value=2.1e-13 Score=123.62 Aligned_cols=111 Identities=15% Similarity=0.140 Sum_probs=92.3
Q ss_pred cHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEE
Q 002356 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (931)
Q Consensus 473 ~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~ 552 (931)
.|+.++++++++|+++|.+|+ |+++|+++++++|++.++++|+++..++ |+........+...+.++.....+..+
T Consensus 4 ~~~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (114)
T 3luq_A 4 RLRLFTEHAPAALAMFDREMR---YLAVSRRWREDYGLGDGDILGMSHYDIF-PEIGEEWKSVHRRGLAGEVIRVEEDCF 79 (114)
T ss_dssp HHHHHHHTCSSEEEEEETTCB---EEEECHHHHHHTTCCSSCCTTCBHHHHC-TTCCHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred HHHHHHhcCCceEEEEcCCcE---EEEECHHHHHHHCCCHHHHcCCcHHHHC-CccHHHHHHHHHHHhcCCcceeeeeEE
Confidence 488999999999999999888 9999999999999999999999987776 555565555555555544333344478
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCC
Q 002356 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (931)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDIT 587 (931)
.+++|..+|+.++..|+++.+|.+.+++++++|||
T Consensus 80 ~~~~g~~~~~~~~~~p~~~~~g~~~~~~~~~~DIT 114 (114)
T 3luq_A 80 VRADGRTQWLRWEVRPWYEGEGRVGGVVIFTEDIT 114 (114)
T ss_dssp EC--CCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EcCCCcEEEEEEEEEEeECCCCCEEEEEEEEeeCC
Confidence 89999999999999999999999999999999998
No 313
>4dj3_A Period circadian protein homolog 3; PAS domain, circadian rhythm, protein binding; 2.50A {Mus musculus}
Probab=99.48 E-value=2e-12 Score=141.27 Aligned_cols=106 Identities=13% Similarity=0.134 Sum_probs=89.8
Q ss_pred ceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCc---EEEEEEEEecCCcE
Q 002356 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD---VTVQLINYTKSGKK 559 (931)
Q Consensus 483 d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~---~~~e~~~~~kdG~~ 559 (931)
+-+...+.+|+ |+|+|+++..++||.++|++|+++..++||++.....+.+...+..+.. ...+++++++||..
T Consensus 175 ~Fitrh~~dG~---~~yvs~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~~~~~f~s~~yR~~~kdG~~ 251 (317)
T 4dj3_A 175 IFTTTHTPGCV---FLEVDERAVPLLGYLPQDLIGTSILTYLHPEDRPLMVAIHQKVLKYAGHPPFEHSPVRFCTQNGEY 251 (317)
T ss_dssp EEEEEECTTSB---EEEECTTHHHHHSCCHHHHTTSBGGGGBCTTTTTHHHHHHHHHHHTTTSCCEECCCEEEECTTSCE
T ss_pred ceEEEecCCCe---EEEEChHHhhhcCcChHHHcCCCHHHeECHHHHHHHHHHHHHHHHcCCCccccceEEEEEccCCCE
Confidence 55667788777 9999999999999999999999999999999999888888888887654 35789999999999
Q ss_pred EEEEEEEEeeecC-CCCEEEEEEEEecCCcccc
Q 002356 560 FWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (931)
Q Consensus 560 ~wv~~~~~pi~d~-~G~~~~~vgi~rDITerk~ 591 (931)
+|++....+++|. .+++.++++.-+-|+....
T Consensus 252 vwvet~~~~~~np~s~~~e~II~~h~v~~~p~~ 284 (317)
T 4dj3_A 252 VILDSSWSSFVNPWSRKVSFIIGRHKVRTSPLN 284 (317)
T ss_dssp EEEEEEEEEEECSSSCCEEEEEEEEEECCCCSS
T ss_pred EEEEEEEEEEECCCCCcccEEEEEEEeccCCCC
Confidence 9999999999986 4666777887775555443
No 314
>3mxq_A Sensor protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.78A {Vibrio cholerae o1 biovar el tor}
Probab=99.48 E-value=3.6e-14 Score=138.67 Aligned_cols=122 Identities=15% Similarity=0.195 Sum_probs=95.9
Q ss_pred Hhhhhc-ccHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCC
Q 002356 466 KEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQT 544 (931)
Q Consensus 466 ~~l~~~-~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~ 544 (931)
+++++. ..|+.+++++++||+++|.+|+ |++||+++++++|++++|++|++...+++. ....+...+..++..|.
T Consensus 15 ~~~~~~~~~l~~il~~~~~gi~v~D~~g~---I~~~N~a~~~~~G~~~~eviG~~~~~~~p~-~~~~~~~~l~~vl~~G~ 90 (152)
T 3mxq_A 15 NAMAKSRLLLSELLDQLSFALCIVRNDYV---IVKVNEYFESRVIFDGETMQGKNILELFPE-SADYLKRKIDTALVIES 90 (152)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEETTSB---EEEECHHHHHTSSSCHHHHTTSBHHHHSGG-GHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEcCCCE---EEEECHHHHHHHCcCHHHHCCCCHHHhcCC-hHHHHHHHHHHHHhcCC
Confidence 344443 4589999999999999999888 999999999999999999999998888877 55556677888888776
Q ss_pred cEEEE---------EEE---EecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccc
Q 002356 545 DVTVQ---------LIN---YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (931)
Q Consensus 545 ~~~~e---------~~~---~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~ 591 (931)
+.... ++. ..++|..+|..+++.|++|++|++.+++.+++|||++++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti~Pl~d~~G~v~gv~~ii~DVTe~~~ 149 (152)
T 3mxq_A 91 SSFSSWEQKPHLLPFKSSRPVSGEEEQMYQNLEVIPIHSEDGTIEHVCLCVYDVTIQAS 149 (152)
T ss_dssp CEEEECCSSSCSSCC----------CCEEEEEEEEEEECTTSCEEEEEEEEEEEECC--
T ss_pred ceeeecccccccccccccCCCCCCCcEEEEEEEEEEEECCCCCEEEEEEEEEECCHHHh
Confidence 53221 111 235678889999999999999999999999999999987
No 315
>3kx0_X Uncharacterized protein RV1364C/MT1410; PAS domain, sensory domain, mycobacteium tuberculos molecule binding domain; 2.30A {Mycobacterium tuberculosis}
Probab=99.48 E-value=7.9e-14 Score=140.68 Aligned_cols=141 Identities=11% Similarity=0.123 Sum_probs=100.2
Q ss_pred hhhcccHHHHHhhccceEEEEc-CCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcE
Q 002356 468 MRKGIDLATTLERIEKNFVITD-PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDV 546 (931)
Q Consensus 468 l~~~~~l~~i~e~~~d~I~v~D-~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~ 546 (931)
+++...|+.++++++++|+++| .+|+ |+++|++|++++||+ +++|+++..++++.........+..++..+...
T Consensus 33 ~~~~~~l~~l~~~~~~~i~~~d~~~g~---i~~~N~a~~~l~G~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 107 (185)
T 3kx0_X 33 VGAAEDVRRIFEHIPAILVGLEGPDHR---FVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQ 107 (185)
T ss_dssp TCCHHHHHHHHHHCSSEEEEEETTTTE---EEEECHHHHHHCCCC--SCTTSBHHHHCTTSCSSSSHHHHHHHHHHCCCE
T ss_pred hhhHHHHHHHHhcCCceEEEEECCCcE---EEEEcHHHHHHcCCc--cccCCcHHHHCCchhhhhHHHHHHHHHHcCCcc
Confidence 4444569999999999999999 8888 999999999999999 999999888888776655666777788777776
Q ss_pred EEEEEEE---ecC--CcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccccccCCchhhHHHHHHHHHhhhhh
Q 002356 547 TVQLINY---TKS--GKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAEN 615 (931)
Q Consensus 547 ~~e~~~~---~kd--G~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e~~~~~~~~~~e~~~~vk~~~~~ 615 (931)
..+.... +++ |..+|+.+++.|+++.+|.+.+++++++|||++|++|++. ...+++.++.++.+.+.
T Consensus 108 ~~~~~~~~~~~~~~gg~~~~~~~~~~pi~~~~g~~~g~~~~~~DITerk~~e~~~--~~ll~~~~~~l~~~~~~ 179 (185)
T 3kx0_X 108 SGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQAA--EARVEELSERYRNVRDS 179 (185)
T ss_dssp EEEEEEEC--------CCEEEEEEEEEEECTTSCEEEEEEEEEECHHHHTTCC---------------------
T ss_pred cccceeEEeeccCCCCccEEEEEEEEEEECCCCCEEEEEEEEEeCCHHHHHHHHH--HHHHHHHHHHHHHHHhh
Confidence 5543322 222 7789999999999999999999999999999999976542 12234444444444433
No 316
>2v0u_A NPH1-1, LOV2; kinase, transferase, ATP-binding, serine/threonine-protein kinase, light-induced signal trans phototropin1, nucleotide-binding; HET: FMN; 1.40A {Avena sativa} PDB: 2v0w_A* 2v1b_A* 2v1a_A* 1jnu_A* 1g28_A*
Probab=99.47 E-value=5.1e-13 Score=125.72 Aligned_cols=121 Identities=40% Similarity=0.821 Sum_probs=107.3
Q ss_pred HHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEE
Q 002356 191 VKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNY 270 (931)
Q Consensus 191 ~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 270 (931)
|+.++++++++++++|..+.+|+|+++|+++++++||+.++++|+++..+.++.........+...+..+..+..++...
T Consensus 4 l~~~~~~~~~~i~~~d~~~~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (146)
T 2v0u_A 4 LATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNCRFLQGPETDRATVRKIRDAIDNQTEVTVQLINY 83 (146)
T ss_dssp CCCTGGGSSSCEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEcCCCCCceEEEEcHHHHHHHCcCHHHHcCCCHHHhcCCcCChHHHHHHHHHHhcCCCcceEEEEE
Confidence 34578999999999997323456999999999999999999999998888888887777888888999999999999999
Q ss_pred ecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHH
Q 002356 271 KKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 311 (931)
Q Consensus 271 ~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~ 311 (931)
+++|..+|+.++..|+.+.+|.+.+++++++|||++++.++
T Consensus 84 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~~~ 124 (146)
T 2v0u_A 84 TKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRDAA 124 (146)
T ss_dssp CTTCCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCHHH
T ss_pred ecCCcEEEEEEEEEEeECCCCCEEEEEEEEeechHHHHHHH
Confidence 99999999999999999999999999999999999998443
No 317
>2kdk_A ARYL hydrocarbon receptor nuclear translocator-LI 2; circadian clock, PAS domain, transcription, activator, biolo rhythms, DNA-binding, nucleus; NMR {Homo sapiens}
Probab=99.47 E-value=2.7e-13 Score=125.48 Aligned_cols=114 Identities=13% Similarity=0.109 Sum_probs=98.7
Q ss_pred HHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcC-CcEEEEEEEE
Q 002356 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQ-TDVTVQLINY 553 (931)
Q Consensus 475 ~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~-~~~~~e~~~~ 553 (931)
.+++++++++|++.|.+|. |+++|+++++++||+++|++|+++..+++|++.....+.+...+..+ .....+++++
T Consensus 6 ~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~G~~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~e~r~~ 82 (121)
T 2kdk_A 6 GEINVKPTEFITRFAVNGK---FVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAVLQSKEKILTDSYKFR 82 (121)
T ss_dssp TCCCCCSSEEEEEECTTSB---EEEECTHHHHHTCCCTTTSBTSBTTTTBCSSSHHHHHHHHHHHHTSSSCEEEEEEEEE
T ss_pred cccccCCccEEEEECCCee---EEEEChhHHHHHCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhCCCCCccEEEEEE
Confidence 4467788999999999888 99999999999999999999999888999988777777777766654 4467899999
Q ss_pred ecCCcEEEEEEEEEeeecCC-CCEEEEEEEEecCCcccc
Q 002356 554 TKSGKKFWNLFHLQPMRDQK-GEVQYFIGVQLDGSEHLE 591 (931)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~-G~~~~~vgi~rDITerk~ 591 (931)
++||+.+|+.++..|++|.. |.+.+++++.+|||+.++
T Consensus 83 ~~dG~~~~~~~~~~~~~d~~~~~~~~~v~~~~~i~~~~~ 121 (121)
T 2kdk_A 83 AKDGSFVTLKSQWFSFTNPDTKELEYIVSVNTLVLGHSE 121 (121)
T ss_dssp CSSSCEEEEEEEEEEEECCSSSCEEEEEEEEECCSSCCC
T ss_pred EcCCCEEEEEEEEEEEECCCCCeeeEEEEEEEeccccCC
Confidence 99999999999999999986 467778999999999763
No 318
>1byw_A Protein (human ERG potassium channel); PAS domain, potassium channel domain, membrane protein; 2.60A {Homo sapiens} SCOP: d.110.3.6
Probab=99.47 E-value=9e-13 Score=117.23 Aligned_cols=107 Identities=29% Similarity=0.579 Sum_probs=94.8
Q ss_pred CcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCC--CCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEE
Q 002356 200 QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (931)
Q Consensus 200 ~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~--~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~ 277 (931)
.+++++|....+|+|+++|++|++++||+.++++|++ ...+.++.........+...+..+..+..++..++++|..+
T Consensus 2 ~~i~i~d~~~~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (110)
T 1byw_A 2 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQALLGAEERKVEIAFYRKDGSCF 81 (110)
T ss_dssp CEEEEEETTSSSCBEEEECHHHHHHHTCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEEECTTSCEE
T ss_pred CCEEEEeccCCCCcEEEECHHHHHHhCCCHHHHccCCCccccccCCcCCHHHHHHHHHHHhcCCCceEEEEEEcCCCCEE
Confidence 5889999876679999999999999999999999998 45666666666667788888888888888888899999999
Q ss_pred EEEEEeeeeecCCCCEEEEEEEEecchhh
Q 002356 278 WNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (931)
Q Consensus 278 w~~~~~~pi~d~~G~v~~~v~~~~DITer 306 (931)
|+.+++.|+.+.+|.+.+++++++|||++
T Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~DiTe~ 110 (110)
T 1byw_A 82 LCLVDVVPVKNEDGAVIMFILNFEVVMEK 110 (110)
T ss_dssp EEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEEEEEEeecCCCCEEEEEEEEEeccCC
Confidence 99999999999999999999999999975
No 319
>3icy_A Sensor protein; sensory box histidine kinase/response regulator domain, kinase, chlorobium tepidum TLS, PSI-2; 2.68A {Chlorobaculum tepidum}
Probab=99.46 E-value=9.6e-14 Score=127.12 Aligned_cols=115 Identities=9% Similarity=-0.035 Sum_probs=104.6
Q ss_pred hHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCC--CCCCCCCCChHHHHHHHHHHHcCCcEE
Q 002356 187 VSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNC--RFLQGAGTDPEDVAKIRETLQNGQSYC 264 (931)
Q Consensus 187 ~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~--~~l~~~~~~~~~~~~l~~~l~~g~~~~ 264 (931)
+++.|+.++++++++++.+|. +|.++++|+++++++||+.++++|... ..+.+|++.......+...+..+..+.
T Consensus 2 s~~~~~~l~~~~~~~i~~~d~---~~~~~~~n~~~~~~~G~~~~~~~~~~~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~ 78 (118)
T 3icy_A 2 NAEELQALVDNIPAAIYHLDV---SGQATIRFRPPAFLKTLVSEHAGTTRLNTLSMIHHDDRHMLSNAYSKLREAKHSLT 78 (118)
T ss_dssp HHHHHHHHHTTCCCCCEEECT---TSCEEECCCCCGGGGGGEEEETTEEEEGGGGGBCGGGHHHHHHHHHHHHHSCCEEE
T ss_pred cHHHHHHHHhcCCceEEEEEc---CCCceEEechhHhhcCCCHHHccCChhHHHHHcCHHHHHHHHHHHHHHHhcCCCce
Confidence 467899999999999999998 677999999999999999999988754 457788887778888888888888899
Q ss_pred EEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002356 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (931)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (931)
.+++.++++|+.+|+..+..|+++++|.+.+++|+++|||
T Consensus 79 ~e~r~~~~~g~~~w~~~~~~~~~~~~g~~~~~~g~~~DIT 118 (118)
T 3icy_A 79 LVYRIVTPEGKLHWIEDHMRSSFSDDGLFSGIDGILCEVT 118 (118)
T ss_dssp EEEEEECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 9999999999999999999999999999999999999998
No 320
>3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP}
Probab=99.46 E-value=2.5e-13 Score=124.32 Aligned_cols=114 Identities=11% Similarity=0.098 Sum_probs=90.8
Q ss_pred cccccchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcC
Q 002356 181 EKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNG 260 (931)
Q Consensus 181 e~~l~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g 260 (931)
++.+++..+.++.++++++++|+++|. +|+|+++|++|++++||+++|++|+++..+.++..... +..+..+
T Consensus 5 ~~~~e~~~~~~~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~~~~~-----~~~~~~~ 76 (118)
T 3olo_A 5 NIQSELEFKFAHYLINNAVEASFCLGD---NWQFLYVNDATCRMTEYSREQLLSMNLQDIDVDFALHD-----WEEIRQK 76 (118)
T ss_dssp --CHHHHHHHHHHHHHHCSSEEEEECT---TSBEEEECHHHHHHHCCCHHHHTTCBGGGTBTTGGGSC-----HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEECC---CCcEEEEHHHHHHHHCCCHHHHhCCChhhcccccCHHH-----HHHHHhc
Confidence 344556667889999999999999998 78899999999999999999999999876665433222 3334456
Q ss_pred CcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002356 261 QSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (931)
Q Consensus 261 ~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (931)
..+..+.+.++++|+.+|+.++..|+.+.+ ..+++++++|||
T Consensus 77 ~~~~~e~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~DIT 118 (118)
T 3olo_A 77 NNYTFKTRYRSQSGRIFLVEMSLTFLEDQE--RRFSCVFVREKS 118 (118)
T ss_dssp SEEEEEEEEECTTCCEEEEEEEEEEEEETT--EEEEEEEEEEC-
T ss_pred CcEEEEEEEEccCCCEEEEEEEEEEEEECC--ccEEEEEEEeCC
Confidence 677888888999999999999999997643 346789999997
No 321
>3icy_A Sensor protein; sensory box histidine kinase/response regulator domain, kinase, chlorobium tepidum TLS, PSI-2; 2.68A {Chlorobaculum tepidum}
Probab=99.45 E-value=9.3e-14 Score=127.23 Aligned_cols=113 Identities=12% Similarity=0.024 Sum_probs=104.0
Q ss_pred ccHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCC--CCCCCCCCCHHHHHHHHHHHHcCCcEEEE
Q 002356 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNC--RFLQGPETDPATVRKIRAAIDNQTDVTVQ 549 (931)
Q Consensus 472 ~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~--~~l~~~~~~~~~~~~l~~~l~~~~~~~~e 549 (931)
.+|+.++++++++++.+|.+|. ++++|+++++++||+.++++|... ..+++|++.....+.+...+..+..+..|
T Consensus 4 ~~~~~l~~~~~~~i~~~d~~~~---~~~~n~~~~~~~G~~~~~~~~~~~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~~e 80 (118)
T 3icy_A 4 EELQALVDNIPAAIYHLDVSGQ---ATIRFRPPAFLKTLVSEHAGTTRLNTLSMIHHDDRHMLSNAYSKLREAKHSLTLV 80 (118)
T ss_dssp HHHHHHHTTCCCCCEEECTTSC---EEECCCCCGGGGGGEEEETTEEEEGGGGGBCGGGHHHHHHHHHHHHHSCCEEEEE
T ss_pred HHHHHHHhcCCceEEEEEcCCC---ceEEechhHhhcCCCHHHccCChhHHHHHcCHHHHHHHHHHHHHHHhcCCCceEE
Confidence 3489999999999999999888 999999999999999999988753 56789998888888888888888889999
Q ss_pred EEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCC
Q 002356 550 LINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (931)
Q Consensus 550 ~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDIT 587 (931)
+++.+++|+.+|+.....|+++++|.+.+++|+++|||
T Consensus 81 ~r~~~~~g~~~w~~~~~~~~~~~~g~~~~~~g~~~DIT 118 (118)
T 3icy_A 81 YRIVTPEGKLHWIEDHMRSSFSDDGLFSGIDGILCEVT 118 (118)
T ss_dssp EEEECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 99999999999999999999999999999999999998
No 322
>2kdk_A ARYL hydrocarbon receptor nuclear translocator-LI 2; circadian clock, PAS domain, transcription, activator, biolo rhythms, DNA-binding, nucleus; NMR {Homo sapiens}
Probab=99.45 E-value=2.7e-13 Score=125.42 Aligned_cols=111 Identities=13% Similarity=0.098 Sum_probs=95.2
Q ss_pred HHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCC-cEEEEEEEEec
Q 002356 194 ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ-SYCGRLLNYKK 272 (931)
Q Consensus 194 ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~-~~~~e~~~~~k 272 (931)
++++++++++++|. +|+|+|+|+++++++||+++|++|+++..+.+|++.......+...+..+. .+..+++.+++
T Consensus 8 ~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~G~~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~e~r~~~~ 84 (121)
T 2kdk_A 8 INVKPTEFITRFAV---NGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAVLQSKEKILTDSYKFRAK 84 (121)
T ss_dssp CCCCSSEEEEEECT---TSBEEEECTHHHHHTCCCTTTSBTSBTTTTBCSSSHHHHHHHHHHHHTSSSCEEEEEEEEECS
T ss_pred cccCCccEEEEECC---CeeEEEEChhHHHHHCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEc
Confidence 56778999999998 788999999999999999999999998888888877766677777776544 45778899999
Q ss_pred CCcEEEEEEEeeeeecCC-CCEEEEEEEEecchhhh
Q 002356 273 DGTPFWNLLTIAPIKDDE-GKVLKFIGMQVEVSKHT 307 (931)
Q Consensus 273 dG~~~w~~~~~~pi~d~~-G~v~~~v~~~~DITerk 307 (931)
||+.+|++++..|++|.. |.+.+++++.+||++.+
T Consensus 85 dG~~~~~~~~~~~~~d~~~~~~~~~v~~~~~i~~~~ 120 (121)
T 2kdk_A 85 DGSFVTLKSQWFSFTNPDTKELEYIVSVNTLVLGHS 120 (121)
T ss_dssp SSCEEEEEEEEEEEECCSSSCEEEEEEEEECCSSCC
T ss_pred CCCEEEEEEEEEEEECCCCCeeeEEEEEEEeccccC
Confidence 999999999999999886 56778899999999864
No 323
>3d72_A Vivid PAS protein VVD; circadian, photoreceptor, blue-light, LOV, signaling protein; HET: FAD; 1.65A {Neurospora crassa} PDB: 3is2_A* 2pd8_A* 3hjk_A* 2pdr_A* 2pd7_A* 2pdt_A* 3hji_A* 3rh8_B*
Probab=99.44 E-value=5.1e-13 Score=128.49 Aligned_cols=127 Identities=31% Similarity=0.581 Sum_probs=105.3
Q ss_pred ceEEEecccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCC-
Q 002356 167 SVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGT- 245 (931)
Q Consensus 167 ~~~~~~dit~~~~~e~~l~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~- 245 (931)
.++...||+.++..+..+ .++++. ++++++|..+.+|+|+++|++|++++||+.+|++|+++..+.+++.
T Consensus 12 ~~~~~~~~~~r~~~~~~~--------~~~~~~-~~i~~~d~~d~~g~i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~ 82 (149)
T 3d72_A 12 IMGYLIQIMNRPNPQVEL--------GPVDTS-VALILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGM 82 (149)
T ss_dssp HHHHHHHHHHCSSCSSCC--------CSCCTT-SCEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGGSTTSC
T ss_pred eeeeeehhhhCcchhHHH--------HhhcCC-ccEEEEeccCCCCcEEEECHHHHHHHCcCHHHHcCCChhHhCCcccc
Confidence 334456777776654332 345664 8999999544588899999999999999999999999887777664
Q ss_pred ----------ChHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEec
Q 002356 246 ----------DPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVE 302 (931)
Q Consensus 246 ----------~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~D 302 (931)
.......+...+..+..+..++..+++||+.+|+.+++.|++|.+|.+.+++++++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~i~~~~g~~~~~v~~~~D 149 (149)
T 3d72_A 83 VKPKSTRKYVDSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQCE 149 (149)
T ss_dssp CCTTCCCSSSCHHHHHHHHHHHHHTCCEEEEEEEECTTCCEEEEEEEEEEEECTTSSEEEEEEECCC
T ss_pred ccccccccccChHHHHHHHHHHHCCCceEEEEEEECCCCCEEEEEEEEEEEEcCCCCEEEEEEEEeC
Confidence 666777888888888899999999999999999999999999999999999999887
No 324
>2l0w_A Potassium voltage-gated channel, subfamily H (EAG member 2, isoform CRA_B; HERG, PAS domain, voltage-gated potassium channel, membrane; NMR {Homo sapiens} PDB: 2l1m_A 2l4r_A
Probab=99.44 E-value=2e-12 Score=120.52 Aligned_cols=118 Identities=27% Similarity=0.537 Sum_probs=101.4
Q ss_pred HHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCC--CCCCCCCCCChHHHHHHHHHHHcCCcEEEE
Q 002356 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPEDVAKIRETLQNGQSYCGR 266 (931)
Q Consensus 189 ~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~--~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e 266 (931)
+.+...+++++++++++|....+|+|+++|++|++++||+.++++|++ +..+.+++........+...+..+..+..+
T Consensus 19 ~~~~~~~~~~~~~i~~~d~~~~~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (138)
T 2l0w_A 19 DTIIRKFEGQSRKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPRTQRRAAAQIAQALLGAEERKVE 98 (138)
T ss_dssp HHHHHHHTTTTSEEEEEESSSTTCBEEEECSHHHHHHSCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHTTCSSCEEEE
T ss_pred HHHHHHHhcCCCCEEEEecCCCCCEEEEeCHHHHHHhCCCHHHHcCCCCcccccCCcccchhHHHHHHHHHhhcCCceeE
Confidence 445566677999999999733356699999999999999999999998 556777776666677788888888888888
Q ss_pred EEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhh
Q 002356 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (931)
Q Consensus 267 ~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITer 306 (931)
+..++++|..+|+.+++.|+.+.+|.+.+++++++|||++
T Consensus 99 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~ 138 (138)
T 2l0w_A 99 IAFYRKDGSCFLCLVDVVPVKNEDGAVIMFILNFEVVMEK 138 (138)
T ss_dssp EEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEC
T ss_pred EEEECCCCCEEEEEEEEEEEeCCCCCEEEEEEEEEeccCC
Confidence 8888999999999999999999999999999999999974
No 325
>1v9y_A Heme PAS sensor protein; signaling protein; HET: HEM; 1.32A {Escherichia coli} SCOP: d.110.3.2 PDB: 1v9z_A* 1vb6_A* 1s67_L* 1s66_L*
Probab=99.43 E-value=2.5e-13 Score=132.42 Aligned_cols=139 Identities=20% Similarity=0.278 Sum_probs=87.4
Q ss_pred EecccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHH
Q 002356 171 SGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDV 250 (931)
Q Consensus 171 ~~dit~~~~~e~~l~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~ 250 (931)
..+++...+..+++...++.|+.++++++++++++|. +|+|+++|+++++++||+.++++|+++..+.++.......
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~d~---~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~ 98 (167)
T 1v9y_A 22 RQDAEVIMKLTDADNAADGIFFPALEQNMMGAVLINE---NDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHP 98 (167)
T ss_dssp ------------------CCHHHHHHTCSSEEEEECT---TSBEEEECHHHHHHHSCCGGGTTTSBGGGGSCGGGTTTHH
T ss_pred HhhHHHHHHHHHHHhhhhHHHHHHHHhCCCCEEEECC---CCcEEEECHHHHHHhCCCHHHHcCCChhhccCccccchHH
Confidence 3677777788888888989999999999999999998 7789999999999999999999999988777766555555
Q ss_pred HHHHHHHHcCCc----EEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhh
Q 002356 251 AKIRETLQNGQS----YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (931)
Q Consensus 251 ~~l~~~l~~g~~----~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (931)
..+......+.. +..++...+++|..+|+.+++.|+ +.+|.+ +++++++|||++++++++|+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~g~~-~~~~~~~DiT~~~~~e~~l~ 164 (167)
T 1v9y_A 99 EYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKV-YYLALVRDASVEMAQKEQTR 164 (167)
T ss_dssp HHHHHHHC----------CEEEEECTTSCEEEEEEEEEEE-EETTEE-EEEEEEEC------------
T ss_pred HHHHHHhhcCCCcccccceEEEEEcCCCcEEEEEEEEEEE-ecCCCE-EEEEEEecCcHHHHHHHHHH
Confidence 555555544433 455777789999999999999999 455665 48999999999999998876
No 326
>3eeh_A Putative light and redox sensing histidine kinase; structural genomic MCSG, protein structure initiative, midwest center for STRU genomics; HET: PG5; 1.95A {Haloarcula marismortui}
Probab=99.43 E-value=3.1e-13 Score=123.73 Aligned_cols=112 Identities=10% Similarity=0.085 Sum_probs=98.8
Q ss_pred ccHHHHHhhccceEEEEcCC-CCCCCEEecCHHHHHHcCCChhhhcCCC--CCCCCCCCCCHHHHHHHHHHHHcCCcEEE
Q 002356 472 IDLATTLERIEKNFVITDPR-LPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (931)
Q Consensus 472 ~~l~~i~e~~~d~I~v~D~~-G~d~~I~~vN~a~~~l~Gys~eEllG~~--~~~l~~~~~~~~~~~~l~~~l~~~~~~~~ 548 (931)
..|+.++++++++++++|.+ |. ++++|+++++++||+.++++|.+ +..+++|++.......+.. +..+..+..
T Consensus 11 ~~~~~~~~~~~~~i~~~d~~~~~---i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 86 (125)
T 3eeh_A 11 RRVRELTEATNDILWEFTADLSE---VLVINSAYEDIWGRSVAKLRENPHDFLNGIHPEDRELMKDTMQS-LMDGESADV 86 (125)
T ss_dssp HHHHHHHSCCCCEEEEEETTSSC---EEEECTHHHHHHSSCHHHHHHCGGGGGGGBCHHHHHHHHHHHHH-HHTTCCEEE
T ss_pred HHHHHHHhcCCceEEEEEcCCCc---EEEecHHHHHHHCCCHHHHccCcHHHHHhcCHHHHHHHHHHHHH-HHcCCCccE
Confidence 56999999999999999998 88 99999999999999999999987 4556677766655555554 667778889
Q ss_pred EEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCC
Q 002356 549 QLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (931)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDIT 587 (931)
++++.+++|..+|+.++..|+.+.+|.+.+++++++|||
T Consensus 87 e~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIT 125 (125)
T 3eeh_A 87 ECRVNATEEYQRWVWIQGEPITNDAGETVRVAGFARDIT 125 (125)
T ss_dssp EEEECGGGTTCEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEEEEcCCCCEEEEEEecEEEECCCCCEEEEEEEEEecC
Confidence 999999999999999999999999999999999999998
No 327
>3mjq_A Uncharacterized protein; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium; 2.60A {Desulfitobacterium hafniense}
Probab=99.40 E-value=4.3e-13 Score=124.09 Aligned_cols=117 Identities=20% Similarity=0.199 Sum_probs=90.0
Q ss_pred HHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEe
Q 002356 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYK 271 (931)
Q Consensus 192 ~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~ 271 (931)
+.++++++++++++|. +|+|+++|+++++++||+.++++|+++..+.++.........+...+..+.. ..++...+
T Consensus 2 ~~l~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 77 (126)
T 3mjq_A 2 KNFLETIEDMILIINR---EGRLLYANTAVPKKLGYTHEELMSMHILTITSAGKMAEGEKILAELFAGKKE-SLPLSLEK 77 (126)
T ss_dssp CTTGGGCSSEEEEEET---TSBEEEECTHHHHHHSCCHHHHHHSBHHHHHCTTCHHHHHHHHHHHHHTCCS-EEEEEEEC
T ss_pred hhHHhhCCceEEEEeC---CCcEEEEcHHHHHHHCCCHHHHcCCCHHHHcCchhHHHHHHHHHHHHhCCCc-eeEEEEEc
Confidence 4678999999999998 7889999999999999999999999988777776666666666666666655 67788889
Q ss_pred cCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhh
Q 002356 272 KDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (931)
Q Consensus 272 kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (931)
++|..+|+.++..|+.+ +...+++++++|||+++++++++.
T Consensus 78 ~~g~~~~~~~~~~~~~~--~~~~~~~~~~~DITe~k~a~~~~~ 118 (126)
T 3mjq_A 78 KEGTSIPAKARIWQGKW--HNEPCLFAIIKDLSKEERASSPPF 118 (126)
T ss_dssp TTSCEEEEEEEEEEEES--SSSEEEEEEEEECC----------
T ss_pred cCCCEEEEEEEEEeeeE--CCceEEEEEEEechHHHHhhcccc
Confidence 99999999999988765 345789999999999999998876
No 328
>4dj2_A Period circadian protein homolog 1; PAS domains, circadian clock protein, protein binding; 2.75A {Mus musculus}
Probab=99.39 E-value=2.2e-12 Score=141.09 Aligned_cols=107 Identities=11% Similarity=0.098 Sum_probs=91.3
Q ss_pred cceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHc-CCcE-EEEEEEEecCCcE
Q 002356 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDN-QTDV-TVQLINYTKSGKK 559 (931)
Q Consensus 482 ~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~-~~~~-~~e~~~~~kdG~~ 559 (931)
.+.+...+.+|+ |+|+|+++..++||.++|++|+++..++||++.....+.+...+.. +... ..++|++++||..
T Consensus 176 ~~Fitrh~~dG~---~~yvd~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~ 252 (320)
T 4dj2_A 176 RIFTTRHTPSCL---FQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHSPIRFCARNGEY 252 (320)
T ss_dssp CEEEEEECTTCB---EEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHTTSSSCCEECCCEEEECSSSCE
T ss_pred ceEEEEecCCce---EEEcCcceeccCCcChHHHcCCcHHHhCCHHHHHHHHHHHHHHHhcCCCcccceEEEEEccCCCE
Confidence 456677788888 9999999999999999999999999999999988887777777774 4445 3699999999999
Q ss_pred EEEEEEEEeeecC-CCCEEEEEEEEecCCcccc
Q 002356 560 FWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (931)
Q Consensus 560 ~wv~~~~~pi~d~-~G~~~~~vgi~rDITerk~ 591 (931)
+|++....+++|. .+++.+++|.-+-|+....
T Consensus 253 vwvet~~~~~~np~s~~~e~II~~h~v~~gp~~ 285 (320)
T 4dj2_A 253 VTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLN 285 (320)
T ss_dssp EEEECEEEEEECTTTCSEEEEEEEEEESSCCSS
T ss_pred EEEEEEEEEEECCCCCCccEEEEEEEEccCCCC
Confidence 9999999999886 5778889999888887655
No 329
>3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP}
Probab=99.39 E-value=1.6e-12 Score=118.91 Aligned_cols=104 Identities=17% Similarity=0.180 Sum_probs=85.9
Q ss_pred HHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002356 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (931)
Q Consensus 474 l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (931)
++.++++++++|+++|.+|+ |+++|+++++++||++++++|+++..+.++..... +..+..+..+..+.++.
T Consensus 15 ~~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~e~~~~ 86 (118)
T 3olo_A 15 AHYLINNAVEASFCLGDNWQ---FLYVNDATCRMTEYSREQLLSMNLQDIDVDFALHD-----WEEIRQKNNYTFKTRYR 86 (118)
T ss_dssp HHHHHHHCSSEEEEECTTSB---EEEECHHHHHHHCCCHHHHTTCBGGGTBTTGGGSC-----HHHHHHHSEEEEEEEEE
T ss_pred HHHHHhcCCceEEEECCCCc---EEEEHHHHHHHHCCCHHHHhCCChhhcccccCHHH-----HHHHHhcCcEEEEEEEE
Confidence 78999999999999999888 99999999999999999999999877775433222 23344456778899999
Q ss_pred ecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCC
Q 002356 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (931)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDIT 587 (931)
+++|+.+|+.++..|+.+.. ..+++++++|||
T Consensus 87 ~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~DIT 118 (118)
T 3olo_A 87 SQSGRIFLVEMSLTFLEDQE--RRFSCVFVREKS 118 (118)
T ss_dssp CTTCCEEEEEEEEEEEEETT--EEEEEEEEEEC-
T ss_pred ccCCCEEEEEEEEEEEEECC--ccEEEEEEEeCC
Confidence 99999999999999997643 346789999997
No 330
>3gdi_A Period circadian protein homolog 2; tandem PAS domains, biological rhythms, cytoplasm, nucleus, phosphoprotein, transcription; 2.40A {Mus musculus}
Probab=99.38 E-value=2.8e-12 Score=139.73 Aligned_cols=106 Identities=9% Similarity=0.084 Sum_probs=89.9
Q ss_pred ceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCC-cEE-EEEEEEecCCcEE
Q 002356 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQT-DVT-VQLINYTKSGKKF 560 (931)
Q Consensus 483 d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~-~~~-~e~~~~~kdG~~~ 560 (931)
..+...+.+|+ |+|+|+++..++||.++|++|+++..++||++.....+.+...+..+. ... .++|++++||..+
T Consensus 166 ~Fitrh~~dG~---~~yvd~~~~~lLGY~peELig~s~~~~iHpdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~v 242 (309)
T 3gdi_A 166 IFTTTHTPNCL---FQAVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQAGGQPFDYSPIRFRTRNGEYI 242 (309)
T ss_dssp EEEEEECTTCB---EEEECTTHHHHHSCCHHHHTTSBHHHHBCTTSHHHHHHHHHHHHHTTTCCEEEEEEEEECTTSCEE
T ss_pred eEEEEecCCCe---EEEECcccccccCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCCceeeceEEEEEccCCCEE
Confidence 45667788777 999999999999999999999999999999998888888888887554 355 6999999999999
Q ss_pred EEEEEEEeeecC-CCCEEEEEEEEecCCcccc
Q 002356 561 WNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (931)
Q Consensus 561 wv~~~~~pi~d~-~G~~~~~vgi~rDITerk~ 591 (931)
|++....++.+. .+++.+++|.-+-|+....
T Consensus 243 wvet~~~~~~np~s~~~e~ii~~h~v~~gp~~ 274 (309)
T 3gdi_A 243 TLDTSWSSFINPWSRKISFIIGRHKVRVGPLN 274 (309)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEEEEEEECCSS
T ss_pred EEEEEEEEEECCCCCcccEEEEEEEEccCCCC
Confidence 999999999886 5677788888777776543
No 331
>3mjq_A Uncharacterized protein; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium; 2.60A {Desulfitobacterium hafniense}
Probab=99.38 E-value=6.4e-13 Score=122.91 Aligned_cols=116 Identities=12% Similarity=0.115 Sum_probs=91.2
Q ss_pred HHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEe
Q 002356 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYT 554 (931)
Q Consensus 475 ~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~ 554 (931)
+.++++++++|+++|.+|. |+++|+++++++||+.++++|+++..++++++.......+...+..+.. ..++++.+
T Consensus 2 ~~l~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 77 (126)
T 3mjq_A 2 KNFLETIEDMILIINREGR---LLYANTAVPKKLGYTHEELMSMHILTITSAGKMAEGEKILAELFAGKKE-SLPLSLEK 77 (126)
T ss_dssp CTTGGGCSSEEEEEETTSB---EEEECTHHHHHHSCCHHHHHHSBHHHHHCTTCHHHHHHHHHHHHHTCCS-EEEEEEEC
T ss_pred hhHHhhCCceEEEEeCCCc---EEEEcHHHHHHHCCCHHHHcCCCHHHHcCchhHHHHHHHHHHHHhCCCc-eeEEEEEc
Confidence 4578999999999999888 9999999999999999999999988888877766666666666666555 77888889
Q ss_pred cCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccccccC
Q 002356 555 KSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (931)
Q Consensus 555 kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e~~~ 596 (931)
++|..+|+.++..|+.+ +...+++++++|||++|+++...
T Consensus 78 ~~g~~~~~~~~~~~~~~--~~~~~~~~~~~DITe~k~a~~~~ 117 (126)
T 3mjq_A 78 KEGTSIPAKARIWQGKW--HNEPCLFAIIKDLSKEERASSPP 117 (126)
T ss_dssp TTSCEEEEEEEEEEEES--SSSEEEEEEEEECC---------
T ss_pred cCCCEEEEEEEEEeeeE--CCceEEEEEEEechHHHHhhccc
Confidence 99999999999987765 33568999999999999865443
No 332
>1byw_A Protein (human ERG potassium channel); PAS domain, potassium channel domain, membrane protein; 2.60A {Homo sapiens} SCOP: d.110.3.6
Probab=99.37 E-value=6.6e-12 Score=111.51 Aligned_cols=107 Identities=31% Similarity=0.551 Sum_probs=92.4
Q ss_pred ceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCC--CCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCcEE
Q 002356 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKF 560 (931)
Q Consensus 483 d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~--~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~ 560 (931)
++|+++|....+++|+++|+++++++||+.++++|++ ...+.+++........+...+..+..+..+....+++|..+
T Consensus 2 ~~i~i~d~~~~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (110)
T 1byw_A 2 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQALLGAEERKVEIAFYRKDGSCF 81 (110)
T ss_dssp CEEEEEETTSSSCBEEEECHHHHHHHTCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEEECTTSCEE
T ss_pred CCEEEEeccCCCCcEEEECHHHHHHhCCCHHHHccCCCccccccCCcCCHHHHHHHHHHHhcCCCceEEEEEEcCCCCEE
Confidence 6899999752223399999999999999999999998 55566666666667778888888888889999999999999
Q ss_pred EEEEEEEeeecCCCCEEEEEEEEecCCcc
Q 002356 561 WNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589 (931)
Q Consensus 561 wv~~~~~pi~d~~G~~~~~vgi~rDITer 589 (931)
|+.++..|+.+.+|.+.+++++++|||++
T Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~DiTe~ 110 (110)
T 1byw_A 82 LCLVDVVPVKNEDGAVIMFILNFEVVMEK 110 (110)
T ss_dssp EEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEEEEEEeecCCCCEEEEEEEEEeccCC
Confidence 99999999999999999999999999985
No 333
>4eho_A Bacteriophytochrome, PAS/PAC sensor; photoreceptor, bacteriopbhytochrome; HET: MSE BLA; 2.90A {Rhodopseudomonas palustris tie-1}
Probab=99.36 E-value=3.5e-13 Score=162.13 Aligned_cols=118 Identities=12% Similarity=0.091 Sum_probs=107.7
Q ss_pred ccHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEE
Q 002356 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (931)
Q Consensus 472 ~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~ 551 (931)
..+..++++++++|+++|.+|+ |++||++|++++||+.+|++|++.....++++... ...+...+..+..+.+|++
T Consensus 518 ~~~~~lle~a~~~i~~~D~~gr---I~~~N~a~~~l~G~s~~e~~g~~~l~~~~~~~~~~-~~~i~~~l~~g~~~~~E~~ 593 (635)
T 4eho_A 518 PQASSQVHASMQPVLITDAEGR---ILLMNDSFRDMLPAGSPSAVHLDDLAGFFVESNDF-LRNVAELIDHGRGWRGEVL 593 (635)
T ss_dssp SSHHHHHHHCSSCCEEEETTCC---EEEECHHHHTTSCSSCCCCCSSGGGTTSSSSCTHH-HHHHHHHHHHCCCBCCCCE
T ss_pred HHHHHHHHhCCCcEEEECCCCe---EeeHHHHHHHHHCcChHHHcCcchhhccCCCCHHH-HHHHHHHHHcCCcEEEEEE
Confidence 5688999999999999999888 99999999999999999999999777778877664 4566777888888999999
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccccc
Q 002356 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (931)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e 593 (931)
++++||+.+|+.+++.|++|.+|++++++++++|||+||++|
T Consensus 594 ~~~~dG~~~~~~~~~~pv~d~~G~v~g~v~i~~DITerK~aE 635 (635)
T 4eho_A 594 LRGAGNRPLPLAVRADPVTRTEDQSLGFVLIFSDATDRRTAD 635 (635)
T ss_dssp ECCSSSSCEECCCCEEEECSTTSSCCEEEECCCCCSSSCCCC
T ss_pred EEccCCcEEEEEEEEEEEECCCCCEEEEEEEEEeCchHhhCC
Confidence 999999999999999999999999999999999999999864
No 334
>2l0w_A Potassium voltage-gated channel, subfamily H (EAG member 2, isoform CRA_B; HERG, PAS domain, voltage-gated potassium channel, membrane; NMR {Homo sapiens} PDB: 2l1m_A 2l4r_A
Probab=99.35 E-value=7.1e-12 Score=116.71 Aligned_cols=113 Identities=29% Similarity=0.523 Sum_probs=100.1
Q ss_pred HHHHHhhccceEEEEcC---CCCCCCEEecCHHHHHHcCCChhhhcCCC--CCCCCCCCCCHHHHHHHHHHHHcCCcEEE
Q 002356 474 LATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (931)
Q Consensus 474 l~~i~e~~~d~I~v~D~---~G~d~~I~~vN~a~~~l~Gys~eEllG~~--~~~l~~~~~~~~~~~~l~~~l~~~~~~~~ 548 (931)
+...+++++++|+++|. +|. |+++|+++++++||+.++++|++ +..+.+++........+...+..+..+..
T Consensus 21 ~~~~~~~~~~~i~~~d~~~~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (138)
T 2l0w_A 21 IIRKFEGQSRKFIIANARVENCA---VIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPRTQRRAAAQIAQALLGAEERKV 97 (138)
T ss_dssp HHHHHTTTTSEEEEEESSSTTCB---EEEECSHHHHHHSCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHTTCSSCEEE
T ss_pred HHHHHhcCCCCEEEEecCCCCCE---EEEeCHHHHHHhCCCHHHHcCCCCcccccCCcccchhHHHHHHHHHhhcCCcee
Confidence 45556779999999999 888 99999999999999999999998 56666777777667777788888888888
Q ss_pred EEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcc
Q 002356 549 QLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589 (931)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITer 589 (931)
+....+++|..+|+.+++.|+.+.+|.+.+++++++|||++
T Consensus 98 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~ 138 (138)
T 2l0w_A 98 EIAFYRKDGSCFLCLVDVVPVKNEDGAVIMFILNFEVVMEK 138 (138)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEC
T ss_pred EEEEECCCCCEEEEEEEEEEEeCCCCCEEEEEEEEEeccCC
Confidence 99999999999999999999999999999999999999985
No 335
>1v9y_A Heme PAS sensor protein; signaling protein; HET: HEM; 1.32A {Escherichia coli} SCOP: d.110.3.2 PDB: 1v9z_A* 1vb6_A* 1s67_L* 1s66_L*
Probab=99.35 E-value=2.6e-12 Score=125.16 Aligned_cols=136 Identities=22% Similarity=0.298 Sum_probs=87.8
Q ss_pred CCCchhhHHHHHhhhhc-ccHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHH
Q 002356 455 RPDSVDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATV 533 (931)
Q Consensus 455 ~~dv~~r~~~~~~l~~~-~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~ 533 (931)
+.++.+.....+.++.. ..|+.++++++++|+++|.+|. |+++|+++++++||+.++++|+++..+.+++......
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~d~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~ 98 (167)
T 1v9y_A 22 RQDAEVIMKLTDADNAADGIFFPALEQNMMGAVLINENDE---VMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHP 98 (167)
T ss_dssp ------------------CCHHHHHHTCSSEEEEECTTSB---EEEECHHHHHHHSCCGGGTTTSBGGGGSCGGGTTTHH
T ss_pred HhhHHHHHHHHHHHhhhhHHHHHHHHhCCCCEEEECCCCc---EEEECHHHHHHhCCCHHHHcCCChhhccCccccchHH
Confidence 44555555555555444 5699999999999999999888 9999999999999999999999988888776655554
Q ss_pred HHHHHHHHcCCc----EEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccccccc
Q 002356 534 RKIRAAIDNQTD----VTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (931)
Q Consensus 534 ~~l~~~l~~~~~----~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e~~ 595 (931)
..+......+.. +..+....+++|..+|+.++..|+ +.+|.. +++++++|||++++.+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~g~~-~~~~~~~DiT~~~~~e~~ 162 (167)
T 1v9y_A 99 EYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKV-YYLALVRDASVEMAQKEQ 162 (167)
T ss_dssp HHHHHHHC----------CEEEEECTTSCEEEEEEEEEEE-EETTEE-EEEEEEEC----------
T ss_pred HHHHHHhhcCCCcccccceEEEEEcCCCcEEEEEEEEEEE-ecCCCE-EEEEEEecCcHHHHHHHH
Confidence 555555444433 455788889999999999999999 456665 499999999999985443
No 336
>3mfx_A Sensory BOX/ggdef family protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Shewanella oneidensis}
Probab=99.35 E-value=2.5e-12 Score=122.02 Aligned_cols=112 Identities=11% Similarity=0.065 Sum_probs=84.5
Q ss_pred HHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcC-------
Q 002356 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNG------- 260 (931)
Q Consensus 188 ~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g------- 260 (931)
.+.++.++++++++|+++|. +|+|+++|++|++++||+.+|++|+++..+.++.........+......+
T Consensus 6 ~~~l~~i~~~~~d~i~~~D~---~g~I~~~N~aa~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (129)
T 3mfx_A 6 LETIELFIQHLTEAMILVNA---NGFIRSCNQRSAELLDCPQVSLKGQDWRNFLTEHHQARYDNLLSHDVQLGTNCGQPV 82 (129)
T ss_dssp HHHHHHHHTTCSSEEEEEET---TSBEEEECHHHHHHTTSCHHHHTTSBGGGGBCTTCCGGGGCTTC----------CCS
T ss_pred HHHHHHHHhcCCceEEEECC---CCEEEeEhHHHHHHHCcCHHHHcCCcHHHHcChHhHHHHHHHHHHHHhcCccccccc
Confidence 35789999999999999998 78899999999999999999999999987777766443222222111111
Q ss_pred CcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchh
Q 002356 261 QSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (931)
Q Consensus 261 ~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITe 305 (931)
..+..++..+++||+.+|++++++|+.+ ++. .++++++|+..
T Consensus 83 ~~~~~E~~~~rkdG~~~~velsis~i~~--~~~-~~v~~~~~~~~ 124 (129)
T 3mfx_A 83 QHPAQETTLICASGKAKDVELSISYIPG--HEP-MFVMVMHDLEH 124 (129)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEEEECS--SSC-EEEEEEEEC--
T ss_pred CCCceEEEEEcCCCCEEEEEEEEEEecC--CCc-EEEEEEechhh
Confidence 1245788889999999999999999973 333 37889999753
No 337
>3d72_A Vivid PAS protein VVD; circadian, photoreceptor, blue-light, LOV, signaling protein; HET: FAD; 1.65A {Neurospora crassa} PDB: 3is2_A* 2pd8_A* 3hjk_A* 2pdr_A* 2pd7_A* 2pdt_A* 3hji_A* 3rh8_B*
Probab=99.34 E-value=4e-12 Score=122.13 Aligned_cols=108 Identities=39% Similarity=0.784 Sum_probs=95.6
Q ss_pred HHHHHhhccceEEEEc---CCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCC-----------CHHHHHHHHHH
Q 002356 474 LATTLERIEKNFVITD---PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPET-----------DPATVRKIRAA 539 (931)
Q Consensus 474 l~~i~e~~~d~I~v~D---~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~-----------~~~~~~~l~~~ 539 (931)
+..++++. ++|+++| .+|+ |+++|+++++++||+.+|++|+++..+.+++. .......+...
T Consensus 28 ~~~~~~~~-~~i~~~d~~d~~g~---i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (149)
T 3d72_A 28 ELGPVDTS-VALILCDLKQKDTP---IVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMVKPKSTRKYVDSNTINTMRKA 103 (149)
T ss_dssp CCCSCCTT-SCEEEEETTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGGSTTSCCCTTCCCSSSCHHHHHHHHHH
T ss_pred HHHhhcCC-ccEEEEeccCCCCc---EEEECHHHHHHHCcCHHHHcCCChhHhCCccccccccccccccChHHHHHHHHH
Confidence 33556664 9999999 6777 99999999999999999999999888887764 66677778888
Q ss_pred HHcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEec
Q 002356 540 IDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLD 585 (931)
Q Consensus 540 l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rD 585 (931)
+..+..+..+++..++||+.+|+.+++.|+++.+|++.+++++++|
T Consensus 104 ~~~~~~~~~e~~~~~~dG~~~~~~~~~~~i~~~~g~~~~~v~~~~D 149 (149)
T 3d72_A 104 IDRNAEVQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQCE 149 (149)
T ss_dssp HHHTCCEEEEEEEECTTCCEEEEEEEEEEEECTTSSEEEEEEECCC
T ss_pred HHCCCceEEEEEEECCCCCEEEEEEEEEEEEcCCCCEEEEEEEEeC
Confidence 8888889999999999999999999999999999999999999887
No 338
>3vol_A Aerotaxis transducer AER2; heme, oxygen sensor protein, PAS, HAMP, cyanoMet, CN-bound, protein; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=99.33 E-value=8e-12 Score=131.33 Aligned_cols=117 Identities=15% Similarity=0.224 Sum_probs=94.0
Q ss_pred cchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHh------------CCChhhhcCCCCCCCCCCCCChHHHHH
Q 002356 185 PRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMT------------GYTSKEVVGRNCRFLQGAGTDPEDVAK 252 (931)
Q Consensus 185 ~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~------------Gys~eEllG~~~~~l~~~~~~~~~~~~ 252 (931)
......++.++++++++|+++|. +|+|+|+|++|++++ ||++++++|+++..+.+. ......
T Consensus 18 ~~e~~~l~~iLd~~~~~vii~D~---~g~I~~~N~a~~~ll~~~~~~~~~~l~G~~~~eliG~~~~~~~~~---~~~~~~ 91 (233)
T 3vol_A 18 GSHMARIKSALDNVSANVMIADN---DLNIIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKN---PAHQRH 91 (233)
T ss_dssp CTHHHHHHHHHTTSSSEEEEEET---TSBEEEECHHHHHHHHHTHHHHHTTCTTCCTTSCTTCBGGGGSSS---HHHHHH
T ss_pred HHHHHHHHHHHhcCCCcEEEECC---CCcEEEecHHHHHHHHHHHHHHHhhcCCCCHHHHcCCCHHHHcCC---HHHHHH
Confidence 34457789999999999999998 888999999999999 899999999998866542 333344
Q ss_pred HHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhh
Q 002356 253 IRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (931)
Q Consensus 253 l~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (931)
++..+. ..+..++. .+|. |+.++++|++|++|++.|++++++|||++++++++++
T Consensus 92 ~~~~~~--~~~~~~~~---~~g~--~~~~~~~Pi~d~~G~~~g~v~~~~DITe~~~~e~ei~ 146 (233)
T 3vol_A 92 LLANLT--GVHKAELN---LGGR--RFSLDVVPVFNDANERLGSAVQWTDRTEEHRAEQEVS 146 (233)
T ss_dssp HHHTCC--SCEEEEEE---ETTE--EEEEEEEEEECTTCCEEEEEEEEEECHHHHHHHHHHH
T ss_pred HHHhcc--cceeEEEE---ECCE--EEEEEEEEEECCCCCEEEEEEEEehhhHHHHHHHHHH
Confidence 444332 23444443 4553 7799999999999999999999999999999998876
No 339
>3mfx_A Sensory BOX/ggdef family protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Shewanella oneidensis}
Probab=99.31 E-value=4.4e-12 Score=120.35 Aligned_cols=110 Identities=12% Similarity=0.094 Sum_probs=84.7
Q ss_pred HHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcC-------CcE
Q 002356 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQ-------TDV 546 (931)
Q Consensus 474 l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~-------~~~ 546 (931)
++.++++++++|+++|.+|+ |+++|+++++++||++++++|+++..++++++.......+......+ ..+
T Consensus 9 l~~i~~~~~d~i~~~D~~g~---I~~~N~aa~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (129)
T 3mfx_A 9 IELFIQHLTEAMILVNANGF---IRSCNQRSAELLDCPQVSLKGQDWRNFLTEHHQARYDNLLSHDVQLGTNCGQPVQHP 85 (129)
T ss_dssp HHHHHTTCSSEEEEEETTSB---EEEECHHHHHHTTSCHHHHTTSBGGGGBCTTCCGGGGCTTC----------CCSCEE
T ss_pred HHHHHhcCCceEEEECCCCE---EEeEhHHHHHHHCcCHHHHcCCcHHHHcChHhHHHHHHHHHHHHhcCcccccccCCC
Confidence 89999999999999999888 99999999999999999999999988888776553222222111111 124
Q ss_pred EEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcc
Q 002356 547 TVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589 (931)
Q Consensus 547 ~~e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITer 589 (931)
..|++.+++||+.+|++++++|+.+ |+. .|+++++|....
T Consensus 86 ~~E~~~~rkdG~~~~velsis~i~~--~~~-~~v~~~~~~~~~ 125 (129)
T 3mfx_A 86 AQETTLICASGKAKDVELSISYIPG--HEP-MFVMVMHDLEHH 125 (129)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEECS--SSC-EEEEEEEEC---
T ss_pred ceEEEEEcCCCCEEEEEEEEEEecC--CCc-EEEEEEechhhh
Confidence 5789999999999999999999973 332 488999997643
No 340
>4eho_A Bacteriophytochrome, PAS/PAC sensor; photoreceptor, bacteriopbhytochrome; HET: MSE BLA; 2.90A {Rhodopseudomonas palustris tie-1}
Probab=99.31 E-value=1.9e-13 Score=164.47 Aligned_cols=118 Identities=14% Similarity=0.169 Sum_probs=105.7
Q ss_pred HHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEE
Q 002356 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLL 268 (931)
Q Consensus 189 ~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~ 268 (931)
+.+..++++++++|+++|. +|+|+|||++|++++||+.+|++|++...+.++++.. ....+...+..++.+.++++
T Consensus 518 ~~~~~lle~a~~~i~~~D~---~grI~~~N~a~~~l~G~s~~e~~g~~~l~~~~~~~~~-~~~~i~~~l~~g~~~~~E~~ 593 (635)
T 4eho_A 518 PQASSQVHASMQPVLITDA---EGRILLMNDSFRDMLPAGSPSAVHLDDLAGFFVESND-FLRNVAELIDHGRGWRGEVL 593 (635)
T ss_dssp SSHHHHHHHCSSCCEEEET---TCCEEEECHHHHTTSCSSCCCCCSSGGGTTSSSSCTH-HHHHHHHHHHHCCCBCCCCE
T ss_pred HHHHHHHHhCCCcEEEECC---CCeEeeHHHHHHHHHCcChHHHcCcchhhccCCCCHH-HHHHHHHHHHcCCcEEEEEE
Confidence 3567889999999999998 7789999999999999999999999877666666554 45667788888889999999
Q ss_pred EEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHH
Q 002356 269 NYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGA 310 (931)
Q Consensus 269 ~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e 310 (931)
.+++||+.+|+.+++.|++|.+|+++|++++++|||++|++|
T Consensus 594 ~~~~dG~~~~~~~~~~pv~d~~G~v~g~v~i~~DITerK~aE 635 (635)
T 4eho_A 594 LRGAGNRPLPLAVRADPVTRTEDQSLGFVLIFSDATDRRTAD 635 (635)
T ss_dssp ECCSSSSCEECCCCEEEECSTTSSCCEEEECCCCCSSSCCCC
T ss_pred EEccCCcEEEEEEEEEEEECCCCCEEEEEEEEEeCchHhhCC
Confidence 999999999999999999999999999999999999999865
No 341
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=99.23 E-value=5.7e-11 Score=110.62 Aligned_cols=106 Identities=17% Similarity=0.256 Sum_probs=80.4
Q ss_pred HHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhC------------CChhhhcCCCCCCCCCCCCChHHHHHHHH
Q 002356 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTG------------YTSKEVVGRNCRFLQGAGTDPEDVAKIRE 255 (931)
Q Consensus 188 ~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~G------------ys~eEllG~~~~~l~~~~~~~~~~~~l~~ 255 (931)
...+++++++++++|+++|. +|+|+|+|++|++++| |+.++++|+++..+.+. ......+..
T Consensus 4 ~~rl~~il~~~~~gviv~D~---~g~I~~~N~a~~~llg~~~~~i~~~~~g~~~~~~~G~~~~~~~~~---~~~~~~~~~ 77 (121)
T 4hi4_A 4 MARIASALDNVSANVMIADN---DLNIIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKN---PAHQRHLLA 77 (121)
T ss_dssp HHHHHHHHTTSSSEEEEEET---TCBEEEECHHHHHHHHHTHHHHHHHCTTCCGGGCTTCBGGGGCSS---HHHHHHHHH
T ss_pred HHHHHHHHhcCCccEEEEcC---CCeEEEecHHHHHHHHHHHHHHHHhcCCCChHHhcCCCHHHhcCC---HHHHHHHHh
Confidence 36789999999999999998 7889999999999995 89999999998766542 222233333
Q ss_pred HHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhh
Q 002356 256 TLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (931)
Q Consensus 256 ~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITer 306 (931)
.+. ..+..++. .+|. ++.++++|++|.+|++.|++++++|||++
T Consensus 78 ~~~--~~~~~~~~---~~~~--~~~~~~~pi~~~~g~~~g~v~~~~DiTee 121 (121)
T 4hi4_A 78 NLT--GVHKAELN---LGGR--RFSLDVVPVFNDANARLGSAVQWTDRTEE 121 (121)
T ss_dssp HCS--SCEEEEEE---ETTE--EEEEEEEEEECTTSCEEEEEEEEEECC--
T ss_pred CcC--CCcEEEEE---ECCE--EEEEEEEEEECCCCCEEEEEEEEEEecCC
Confidence 322 33444432 3554 56789999999999999999999999974
No 342
>3fc7_A HTR-like protein, sensor protein; APC87712.1, HTR-like protein,haloarcula marismortui ATCC 430 structural genomics, PSI-2; 2.65A {Haloarcula marismortui}
Probab=99.23 E-value=5.5e-12 Score=116.66 Aligned_cols=108 Identities=11% Similarity=0.125 Sum_probs=76.3
Q ss_pred hHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEE
Q 002356 187 VSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGR 266 (931)
Q Consensus 187 ~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e 266 (931)
+++.|+.++++++++++++|. +|+|+++|++|++++||+.++++|+++..+.+++...............+...
T Consensus 17 ~~~~~~~i~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 90 (125)
T 3fc7_A 17 TRKKFESLVSDSPDGIVHLTT---NGTILSVNPSMAGRLGADPDTLVGQQLSAVMDSEAANQRLEAGKSAVENGTAT--- 90 (125)
T ss_dssp ---------CCSCCEEEEEET---TSBEEEECHHHHHHHTSCHHHHTTSBGGGSSCHHHHHHHHHHHHHHHHHTSCE---
T ss_pred HHHHHHHHHhcCCCeEEEEcC---CCeEEEECHHHHHHhCCCHHHHcCccHHHhCCHHHHHHHHHHHHHHhcCCCeE---
Confidence 778899999999999999998 78899999999999999999999999887663332222222334555555543
Q ss_pred EEEEecCCc-EEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002356 267 LLNYKKDGT-PFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (931)
Q Consensus 267 ~~~~~kdG~-~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (931)
..++|. .+|+.+++.|+.+. |...+++++++|||
T Consensus 91 ---~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~DIT 125 (125)
T 3fc7_A 91 ---RSEDAVGGRHYHNQYIPVDSH-RKSDTFQLVSRDIT 125 (125)
T ss_dssp ---EEEEEETTEEEEEEEEESSTT-TTTTEEEEEEEECC
T ss_pred ---EeEcCCCcEEEEEEEEeEecC-CCeEEEEEEEecCC
Confidence 234455 67999999998765 66678999999997
No 343
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.23 E-value=2.4e-11 Score=129.74 Aligned_cols=139 Identities=13% Similarity=0.087 Sum_probs=111.5
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEEEEeCCeEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV 747 (931)
..|++...++.|+++.||++.. .+..+++|....... .....+.+|..+|+.+. +..++++++++...+..|+|
T Consensus 14 ~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~---~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 14 EKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYK---GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp TTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGT---TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred ccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccC---CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 4799999999999999999975 367899999865321 11235788999999984 67888999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-------------------------------------- 789 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-------------------------------------- 789 (931)
|||++|.+|.+.+. +......++.++..+|..||+
T Consensus 89 ~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 89 MSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp EECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred EEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 99999999987631 112234678899999999999
Q ss_pred ---------------------CCCccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 790 ---------------------QGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 790 ---------------------~gIiHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
.+++|+|++|.|||++.++.+.|+||+.+.
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 458999999999999865556799999874
No 344
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=99.22 E-value=2.6e-11 Score=118.32 Aligned_cols=122 Identities=16% Similarity=0.124 Sum_probs=95.5
Q ss_pred HHHHHHHHHhcCCcEEEEeCCCCCCceEEcchH---HHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEE
Q 002356 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAG---FFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYC 264 (931)
Q Consensus 188 ~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a---~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~ 264 (931)
.+.+.++|++++++|+++|. +|+|+|+|++ +++++| ..++++|+++..+.++. .....+.+..+++.+....
T Consensus 18 ~~~l~~IL~~~~~gI~~vD~---~g~I~~~N~a~~~~~~i~g-~~~~~iGr~v~~~~~~~-~~~~v~~i~~~l~~g~~~~ 92 (151)
T 2qkp_A 18 VEQANLILNHLPLEITFVNK---DDIFQYYNDSVPAAEMVFK-RTPSQVGRNVELCHPPK-VLDKVKKVFELLRNGQRDK 92 (151)
T ss_dssp HHHHHHHHHHSSSEEEEEET---TSBEEEECCCSCGGGCSSC-CCGGGTTSBGGGSSCHH-HHHHHHHHHHHHHTTSBSE
T ss_pred HHHHHHHHHhCCCceEEEcC---CCeEEEEeCCCchhhhhcC-CCHHHcCCCHHHhCCHH-HHHHHHHHHHHHHcCCccE
Confidence 36689999999999999998 7779999999 999999 56789999998765532 2333456777788887766
Q ss_pred EEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhc
Q 002356 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (931)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~ 315 (931)
.++.....+ ...++.++..|++|++|++.|++.+++|||+.+++++++++
T Consensus 93 ~~~~~~~~~-~~~~v~v~~~Pi~d~~G~~~G~vev~~Dit~l~~le~~r~~ 142 (151)
T 2qkp_A 93 VNMWFQSER-LGKFVYVTYAAVRDQAGDFQGVLEYVQDIKPFFELDSEFNR 142 (151)
T ss_dssp EEEEEEETT-TTEEEEEEEEEEECTTCCEEEEEEEEEECGGGGGGGGC---
T ss_pred EEEEEecCC-CCeEEEEEEEEEECCCCCEEEEEEEEEECHHHHhhhhhhhc
Confidence 665543332 12467889999999999999999999999999988877553
No 345
>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.21 E-value=1.5e-11 Score=138.07 Aligned_cols=108 Identities=11% Similarity=0.011 Sum_probs=96.8
Q ss_pred CcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEE
Q 002356 200 QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWN 279 (931)
Q Consensus 200 ~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w~ 279 (931)
..++..|. ||+++|+|++++.++||+++|++|+++..++||++.......++..+..|..+..+++.++|||..+|+
T Consensus 252 ~f~~~~~~---dg~~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~g~~~~~eyR~~~kdG~~vWv 328 (361)
T 4f3l_A 252 EFTSRHSL---EWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWL 328 (361)
T ss_dssp EEEEEECT---TSBEEEECTTSHHHHCCCHHHHTTSBGGGGBCHHHHHHHHHHHHHHHHHSEEECCCEEEECTTSEEEEE
T ss_pred eeEEEEcC---CceEEEECChhhhhhCcCHHHHcCCCHHHeECHHHHHHHHHHHHHHHhCCCcceEEEEEEecCCCEEEE
Confidence 34455555 889999999999999999999999999999999888888888888888888777889999999999999
Q ss_pred EEEeeeeecC-CCCEEEEEEEEecchhhhHHH
Q 002356 280 LLTIAPIKDD-EGKVLKFIGMQVEVSKHTEGA 310 (931)
Q Consensus 280 ~~~~~pi~d~-~G~v~~~v~~~~DITerk~~e 310 (931)
+.+..|++|. +|++.+++++.+|||+++..+
T Consensus 329 ~~~~~~v~~~~~g~~~~iv~~~~dITe~~~~~ 360 (361)
T 4f3l_A 329 QTHYYITYHQWNSRPEFIVCTHTVVSYAEVRA 360 (361)
T ss_dssp EEEEEEEECTTTCCEEEEEEEEEECCHHHHHH
T ss_pred EEEEEEEEcCCCCCeeEEEEEEEECChhHhhc
Confidence 9999999998 799999999999999998765
No 346
>3fc7_A HTR-like protein, sensor protein; APC87712.1, HTR-like protein,haloarcula marismortui ATCC 430 structural genomics, PSI-2; 2.65A {Haloarcula marismortui}
Probab=99.19 E-value=1.2e-11 Score=114.37 Aligned_cols=108 Identities=11% Similarity=0.086 Sum_probs=76.7
Q ss_pred hcccHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEE
Q 002356 470 KGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQ 549 (931)
Q Consensus 470 ~~~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e 549 (931)
....|+.++++++++|+++|.+|+ |+++|+++++++||+.++++|+++..+.+++...............+...
T Consensus 17 ~~~~~~~i~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 90 (125)
T 3fc7_A 17 TRKKFESLVSDSPDGIVHLTTNGT---ILSVNPSMAGRLGADPDTLVGQQLSAVMDSEAANQRLEAGKSAVENGTAT--- 90 (125)
T ss_dssp ---------CCSCCEEEEEETTSB---EEEECHHHHHHHTSCHHHHTTSBGGGSSCHHHHHHHHHHHHHHHHHTSCE---
T ss_pred HHHHHHHHHhcCCCeEEEEcCCCe---EEEECHHHHHHhCCCHHHHcCccHHHhCCHHHHHHHHHHHHHHhcCCCeE---
Confidence 445689999999999999999888 99999999999999999999999888774332222223334455555443
Q ss_pred EEEEecCCc-EEEEEEEEEeeecCCCCEEEEEEEEecCC
Q 002356 550 LINYTKSGK-KFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (931)
Q Consensus 550 ~~~~~kdG~-~~wv~~~~~pi~d~~G~~~~~vgi~rDIT 587 (931)
..++|. .+|+.+++.|+.+. |...+++++++|||
T Consensus 91 ---~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~DIT 125 (125)
T 3fc7_A 91 ---RSEDAVGGRHYHNQYIPVDSH-RKSDTFQLVSRDIT 125 (125)
T ss_dssp ---EEEEEETTEEEEEEEEESSTT-TTTTEEEEEEEECC
T ss_pred ---EeEcCCCcEEEEEEEEeEecC-CCeEEEEEEEecCC
Confidence 234455 67999999998765 66678999999998
No 347
>2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis}
Probab=99.18 E-value=2.4e-11 Score=112.01 Aligned_cols=94 Identities=17% Similarity=0.104 Sum_probs=68.6
Q ss_pred HHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEec
Q 002356 193 DALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKK 272 (931)
Q Consensus 193 ~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~k 272 (931)
.+++++++.|+++|. +|+|+|+|+++++++||+++|++|+++..+.+|++.......+. ..+.....+++.++|
T Consensus 3 ~lle~~~d~i~v~d~---~G~i~yvn~~~~~~lGy~~~el~G~~~~~~ihp~D~~~~~~~~~---~~~~~~~~e~r~~~k 76 (111)
T 2vlg_A 3 FPLQTKTDIHAVLAS---NGRIIYISANSKLHLGYLQGEMIGSFLKTFLHEEDQFLVESYFY---NEHHLMPCTFRFIKK 76 (111)
T ss_dssp ------CCEEEEECT---TSBEEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHH---CSCCSSCEEEEEECT
T ss_pred chhhcCCCEEEEEcC---CCeEEEEChHHHHHhCCCHHHHcCCcHHHeECHhHHHHHHHHHh---ccCCCccEEEEEEcC
Confidence 578999999999997 78899999999999999999999999888888887665544332 223334567888899
Q ss_pred CCcEEEEEEEeeeeecCCCC
Q 002356 273 DGTPFWNLLTIAPIKDDEGK 292 (931)
Q Consensus 273 dG~~~w~~~~~~pi~d~~G~ 292 (931)
||+.+|++++++++.+..+.
T Consensus 77 dG~~~wve~~~~~v~~~~~~ 96 (111)
T 2vlg_A 77 DHTIVWVEAAVEIVTTRAER 96 (111)
T ss_dssp TSCEEEEEEEEEEC------
T ss_pred CCCEEEEEEEEEEEecccCC
Confidence 99999999999999987553
No 348
>3vol_A Aerotaxis transducer AER2; heme, oxygen sensor protein, PAS, HAMP, cyanoMet, CN-bound, protein; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=99.18 E-value=9e-11 Score=123.26 Aligned_cols=107 Identities=19% Similarity=0.280 Sum_probs=85.5
Q ss_pred cHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHc------------CCChhhhcCCCCCCCCCCCCCHHHHHHHHHHH
Q 002356 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELT------------EYSREEILGRNCRFLQGPETDPATVRKIRAAI 540 (931)
Q Consensus 473 ~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~------------Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l 540 (931)
+++.++++++++|+++|.+|+ |+|+|++|++++ ||++++++|+++..+.+. ......++..+
T Consensus 23 ~l~~iLd~~~~~vii~D~~g~---I~~~N~a~~~ll~~~~~~~~~~l~G~~~~eliG~~~~~~~~~---~~~~~~~~~~~ 96 (233)
T 3vol_A 23 RIKSALDNVSANVMIADNDLN---IIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKN---PAHQRHLLANL 96 (233)
T ss_dssp HHHHHHTTSSSEEEEEETTSB---EEEECHHHHHHHHHTHHHHHTTCTTCCTTSCTTCBGGGGSSS---HHHHHHHHHTC
T ss_pred HHHHHHhcCCCcEEEECCCCc---EEEecHHHHHHHHHHHHHHHhhcCCCCHHHHcCCCHHHHcCC---HHHHHHHHHhc
Confidence 388999999999999999888 999999999998 899999999998777643 23333333332
Q ss_pred HcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccc
Q 002356 541 DNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (931)
Q Consensus 541 ~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~ 592 (931)
. ..+..++. .+|. |+.+++.|++|++|++.|++++++|||++++.
T Consensus 97 ~--~~~~~~~~---~~g~--~~~~~~~Pi~d~~G~~~g~v~~~~DITe~~~~ 141 (233)
T 3vol_A 97 T--GVHKAELN---LGGR--RFSLDVVPVFNDANERLGSAVQWTDRTEEHRA 141 (233)
T ss_dssp C--SCEEEEEE---ETTE--EEEEEEEEEECTTCCEEEEEEEEEECHHHHHH
T ss_pred c--cceeEEEE---ECCE--EEEEEEEEEECCCCCEEEEEEEEehhhHHHHH
Confidence 2 23444443 3564 77899999999999999999999999999983
No 349
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=99.17 E-value=1.6e-10 Score=107.63 Aligned_cols=104 Identities=19% Similarity=0.284 Sum_probs=79.2
Q ss_pred cHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcC------------CChhhhcCCCCCCCCCCCCCHHHHHHHHHHH
Q 002356 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTE------------YSREEILGRNCRFLQGPETDPATVRKIRAAI 540 (931)
Q Consensus 473 ~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~G------------ys~eEllG~~~~~l~~~~~~~~~~~~l~~~l 540 (931)
+++.++++++++|+++|.+|+ |+++|++|++++| |+.++++|++...+.+. ......+....
T Consensus 6 rl~~il~~~~~gviv~D~~g~---I~~~N~a~~~llg~~~~~i~~~~~g~~~~~~~G~~~~~~~~~---~~~~~~~~~~~ 79 (121)
T 4hi4_A 6 RIASALDNVSANVMIADNDLN---IIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKN---PAHQRHLLANL 79 (121)
T ss_dssp HHHHHHTTSSSEEEEEETTCB---EEEECHHHHHHHHHTHHHHHHHCTTCCGGGCTTCBGGGGCSS---HHHHHHHHHHC
T ss_pred HHHHHHhcCCccEEEEcCCCe---EEEecHHHHHHHHHHHHHHHHhcCCCChHHhcCCCHHHhcCC---HHHHHHHHhCc
Confidence 489999999999999999888 9999999999995 89999999997776643 22222222222
Q ss_pred HcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcc
Q 002356 541 DNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589 (931)
Q Consensus 541 ~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITer 589 (931)
. ..+..++. .+|. ++.+++.|++|.+|++.|++++++|||++
T Consensus 80 ~--~~~~~~~~---~~~~--~~~~~~~pi~~~~g~~~g~v~~~~DiTee 121 (121)
T 4hi4_A 80 T--GVHKAELN---LGGR--RFSLDVVPVFNDANARLGSAVQWTDRTEE 121 (121)
T ss_dssp S--SCEEEEEE---ETTE--EEEEEEEEEECTTSCEEEEEEEEEECC--
T ss_pred C--CCcEEEEE---ECCE--EEEEEEEEEECCCCCEEEEEEEEEEecCC
Confidence 2 33444433 3554 55788999999999999999999999984
No 350
>3fg8_A Uncharacterized protein RHA05790; PAS domain, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; HET: 3PB; 1.80A {Rhodococcus SP}
Probab=99.17 E-value=9.9e-12 Score=115.22 Aligned_cols=111 Identities=17% Similarity=0.128 Sum_probs=86.9
Q ss_pred cchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEE
Q 002356 185 PRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYC 264 (931)
Q Consensus 185 ~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~ 264 (931)
....+..++++++++++|+++|. +|+|+++|+++++++||+.++++|+++..+.++.........+..++..+....
T Consensus 8 ~~~~~~~~~il~~~~~~i~~~D~---~g~i~~~N~a~~~l~g~~~~e~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (118)
T 3fg8_A 8 HHHSSGRENLYFQGGLGFMALDE---DLRIIYVNSGCLRHVRRSRDELLGRVVTEVLPETQGSYFDALCRKVLATGREQQ 84 (118)
T ss_dssp -----CCCCSSSCTTCEEEEECT---TCBEEEECHHHHHHHTCCHHHHTTSBHHHHCGGGTTSHHHHHHHHHHHHCCCEE
T ss_pred ccccchHHHHHhhCCceEEEECC---CCeEEEECHHHHHHhCCCHHHHcCCcHHHHcCccchHHHHHHHHHHHHcCCceE
Confidence 34445667789999999999998 888999999999999999999999998877766666667778888898888877
Q ss_pred EEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhh
Q 002356 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (931)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITer 306 (931)
.++.....+| .|+.+++.|+.+ +++++++|||++
T Consensus 85 ~~~~~~~~~g--~~~~~~~~p~~~------g~v~~~~DITer 118 (118)
T 3fg8_A 85 TRVDSLYSPG--MTIEVTAAADSG------ALVVHFRDVTAE 118 (118)
T ss_dssp EEEECSSSTT--CEEEEEEEEETT------EEEEEEEECSCC
T ss_pred EEEEEEcCCC--eEEEEEEEEcCC------cEEEEEEeccCC
Confidence 6443333466 588888889753 378899999985
No 351
>3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.16 E-value=1e-10 Score=106.85 Aligned_cols=107 Identities=21% Similarity=0.254 Sum_probs=83.8
Q ss_pred HHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcE-EEEEE
Q 002356 190 IVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY-CGRLL 268 (931)
Q Consensus 190 ~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~-~~e~~ 268 (931)
+...++++++++++++|. +|+|+++|+++++++||+.++++|+++..+.++... ....+..++..+... ..+..
T Consensus 8 l~~~il~~~~~~i~~~D~---~g~I~~~N~aa~~l~g~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 82 (115)
T 3b33_A 8 LPSAILNNMVTATLILDD---GLAIRYANPAAELLFSQSAKRIVEQSLSQLIQHASL--DLALLTQPLQSGQSITDSDVT 82 (115)
T ss_dssp HHHHHHHHCSSEEEEECT---TCBEEEECHHHHHHTTSCHHHHTTCBHHHHCSEEEC--CTHHHHHHHHHCCCEEEEEEE
T ss_pred cHHHHHhhcCceEEEECC---CCcEEEECHHHHHHhCCCHHHHhCCCHHHHhCccch--hhHHHHHHHHcCCcccCCceE
Confidence 456699999999999998 778999999999999999999999987755443221 123455566666654 34555
Q ss_pred EEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002356 269 NYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (931)
Q Consensus 269 ~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (931)
.. ++|..+|+.+++.|+.+ +|. .+++.+++||+
T Consensus 83 ~~-~~g~~~~~~~~~~pi~~-~g~-~~~l~~~~Di~ 115 (115)
T 3b33_A 83 FV-VDGRPLMLEVTVSPITW-QRQ-LMLLVEMRKID 115 (115)
T ss_dssp EE-ETTEEEEEEEEEEEEEE-TTE-EEEEEEEEEC-
T ss_pred Ee-cCCCEEEEEEEEEEeec-CCc-eEEEEEEEeCC
Confidence 55 78999999999999998 776 68999999985
No 352
>2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis}
Probab=99.15 E-value=4.1e-11 Score=110.40 Aligned_cols=93 Identities=11% Similarity=0.061 Sum_probs=70.6
Q ss_pred HHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEec
Q 002356 476 TTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTK 555 (931)
Q Consensus 476 ~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~k 555 (931)
.++++++++|+++|.+|. |+|+|+++++++||+++|++|+++..++||++.....+.+. ..+.....+++++++
T Consensus 3 ~lle~~~d~i~v~d~~G~---i~yvn~~~~~~lGy~~~el~G~~~~~~ihp~D~~~~~~~~~---~~~~~~~~e~r~~~k 76 (111)
T 2vlg_A 3 FPLQTKTDIHAVLASNGR---IIYISANSKLHLGYLQGEMIGSFLKTFLHEEDQFLVESYFY---NEHHLMPCTFRFIKK 76 (111)
T ss_dssp ------CCEEEEECTTSB---EEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHH---CSCCSSCEEEEEECT
T ss_pred chhhcCCCEEEEEcCCCe---EEEEChHHHHHhCCCHHHHcCCcHHHeECHhHHHHHHHHHh---ccCCCccEEEEEEcC
Confidence 478899999999999888 99999999999999999999999999999998776544332 223334568889999
Q ss_pred CCcEEEEEEEEEeeecCCC
Q 002356 556 SGKKFWNLFHLQPMRDQKG 574 (931)
Q Consensus 556 dG~~~wv~~~~~pi~d~~G 574 (931)
||+.+|+.+++.++.+..+
T Consensus 77 dG~~~wve~~~~~v~~~~~ 95 (111)
T 2vlg_A 77 DHTIVWVEAAVEIVTTRAE 95 (111)
T ss_dssp TSCEEEEEEEEEEC-----
T ss_pred CCCEEEEEEEEEEEecccC
Confidence 9999999999999988765
No 353
>3fg8_A Uncharacterized protein RHA05790; PAS domain, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; HET: 3PB; 1.80A {Rhodococcus SP}
Probab=99.14 E-value=1.9e-11 Score=113.22 Aligned_cols=107 Identities=14% Similarity=0.086 Sum_probs=87.2
Q ss_pred ccHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEE
Q 002356 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (931)
Q Consensus 472 ~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~ 551 (931)
.+++.++++++++|+++|.+|+ |+++|+++++++|++.++++|+++..++++.........+...+..+.....++.
T Consensus 12 ~~~~~il~~~~~~i~~~D~~g~---i~~~N~a~~~l~g~~~~e~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (118)
T 3fg8_A 12 SGRENLYFQGGLGFMALDEDLR---IIYVNSGCLRHVRRSRDELLGRVVTEVLPETQGSYFDALCRKVLATGREQQTRVD 88 (118)
T ss_dssp -CCCCSSSCTTCEEEEECTTCB---EEEECHHHHHHHTCCHHHHTTSBHHHHCGGGTTSHHHHHHHHHHHHCCCEEEEEE
T ss_pred chHHHHHhhCCceEEEECCCCe---EEEECHHHHHHhCCCHHHHcCCcHHHHcCccchHHHHHHHHHHHHcCCceEEEEE
Confidence 3477889999999999999888 9999999999999999999999988887766666667778888888888777443
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcc
Q 002356 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589 (931)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITer 589 (931)
....+| .|+.+++.|+.+ | ++++++|||+|
T Consensus 89 ~~~~~g--~~~~~~~~p~~~--g----~v~~~~DITer 118 (118)
T 3fg8_A 89 SLYSPG--MTIEVTAAADSG--A----LVVHFRDVTAE 118 (118)
T ss_dssp CSSSTT--CEEEEEEEEETT--E----EEEEEEECSCC
T ss_pred EEcCCC--eEEEEEEEEcCC--c----EEEEEEeccCC
Confidence 333466 478888888743 3 78899999986
No 354
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=99.13 E-value=1.4e-10 Score=112.97 Aligned_cols=117 Identities=15% Similarity=0.132 Sum_probs=92.2
Q ss_pred HHHHHhhccceEEEEcCCCCCCCEEecCHH---HHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEE
Q 002356 474 LATTLERIEKNFVITDPRLPDNPIIFASDS---FLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQL 550 (931)
Q Consensus 474 l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a---~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~ 550 (931)
|.++|++++++|+++|.+|+ |+|+|++ +++++| ..++++|+++..+.++. .....+.+...++.+.....+.
T Consensus 21 l~~IL~~~~~gI~~vD~~g~---I~~~N~a~~~~~~i~g-~~~~~iGr~v~~~~~~~-~~~~v~~i~~~l~~g~~~~~~~ 95 (151)
T 2qkp_A 21 ANLILNHLPLEITFVNKDDI---FQYYNDSVPAAEMVFK-RTPSQVGRNVELCHPPK-VLDKVKKVFELLRNGQRDKVNM 95 (151)
T ss_dssp HHHHHHHSSSEEEEEETTSB---EEEECCCSCGGGCSSC-CCGGGTTSBGGGSSCHH-HHHHHHHHHHHHHTTSBSEEEE
T ss_pred HHHHHHhCCCceEEEcCCCe---EEEEeCCCchhhhhcC-CCHHHcCCCHHHhCCHH-HHHHHHHHHHHHHcCCccEEEE
Confidence 89999999999999999888 9999999 999999 56789999987765432 2334456667777777666665
Q ss_pred EEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccccccC
Q 002356 551 INYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (931)
Q Consensus 551 ~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e~~~ 596 (931)
.....+ ...++.++..|++|++|++.|++.+++|||+.++.+..+
T Consensus 96 ~~~~~~-~~~~v~v~~~Pi~d~~G~~~G~vev~~Dit~l~~le~~r 140 (151)
T 2qkp_A 96 WFQSER-LGKFVYVTYAAVRDQAGDFQGVLEYVQDIKPFFELDSEF 140 (151)
T ss_dssp EEEETT-TTEEEEEEEEEEECTTCCEEEEEEEEEECGGGGGGGGC-
T ss_pred EEecCC-CCeEEEEEEEEEECCCCCEEEEEEEEEECHHHHhhhhhh
Confidence 553332 124678889999999999999999999999998865444
No 355
>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.11 E-value=8.9e-11 Score=132.76 Aligned_cols=108 Identities=12% Similarity=0.025 Sum_probs=91.0
Q ss_pred cCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCc-EEEEEEEEecCCcE
Q 002356 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS-YCGRLLNYKKDGTP 276 (931)
Q Consensus 198 ~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~-~~~e~~~~~kdG~~ 276 (931)
..+.++..|. ||+++|+|++++.++||+++|++|+++..++||++.......+...+..++. +..+++.++|||..
T Consensus 277 ~~~fi~~~~~---dg~~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~~~~~~~~eyR~~~kdG~~ 353 (387)
T 4f3l_B 277 SMEYVSRHAI---DGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 353 (387)
T ss_dssp CCEEEEEECT---TSBEEEECTHHHHHHCCCHHHHTTSBGGGTBCHHHHHHHHHHHHHHTTCSSCEECCCEEEECTTSCE
T ss_pred CceEEEEECC---CCEEEEECCCcccccCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhcCCCeeeEEEEEEccCCCE
Confidence 4455666666 8889999999999999999999999998899998887777777777766554 55789999999999
Q ss_pred EEEEEEeeeeecC-CCCEEEEEEEEecchhhhH
Q 002356 277 FWNLLTIAPIKDD-EGKVLKFIGMQVEVSKHTE 308 (931)
Q Consensus 277 ~w~~~~~~pi~d~-~G~v~~~v~~~~DITerk~ 308 (931)
+|++.+..+++|. .|++.+++|+.+|||+||+
T Consensus 354 vWv~~~~~~~~~~~~g~~~~ivg~~~dIT~Rk~ 386 (387)
T 4f3l_B 354 ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVL 386 (387)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEECC----
T ss_pred EEEEEEEEEEECCCCCCEEEEEEEEEEcchhhc
Confidence 9999999999997 7899999999999999874
No 356
>3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.10 E-value=2.7e-10 Score=104.12 Aligned_cols=106 Identities=11% Similarity=0.084 Sum_probs=83.8
Q ss_pred HHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCc-EEEEEEE
Q 002356 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-VTVQLIN 552 (931)
Q Consensus 474 l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~-~~~e~~~ 552 (931)
...++++++++|+++|.+|+ |+++|+++++++|++.++++|+++..+.++... ....+...+..+.. ...+..+
T Consensus 9 ~~~il~~~~~~i~~~D~~g~---I~~~N~aa~~l~g~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 83 (115)
T 3b33_A 9 PSAILNNMVTATLILDDGLA---IRYANPAAELLFSQSAKRIVEQSLSQLIQHASL--DLALLTQPLQSGQSITDSDVTF 83 (115)
T ss_dssp HHHHHHHCSSEEEEECTTCB---EEEECHHHHHHTTSCHHHHTTCBHHHHCSEEEC--CTHHHHHHHHHCCCEEEEEEEE
T ss_pred HHHHHhhcCceEEEECCCCc---EEEECHHHHHHhCCCHHHHhCCCHHHHhCccch--hhHHHHHHHHcCCcccCCceEE
Confidence 56699999999999999888 999999999999999999999997666554321 12234445555555 3456666
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCC
Q 002356 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (931)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDIT 587 (931)
. ++|..+|+.+++.|+.+ +|. .+++.+++||+
T Consensus 84 ~-~~g~~~~~~~~~~pi~~-~g~-~~~l~~~~Di~ 115 (115)
T 3b33_A 84 V-VDGRPLMLEVTVSPITW-QRQ-LMLLVEMRKID 115 (115)
T ss_dssp E-ETTEEEEEEEEEEEEEE-TTE-EEEEEEEEEC-
T ss_pred e-cCCCEEEEEEEEEEeec-CCc-eEEEEEEEeCC
Confidence 5 89999999999999998 776 68899999985
No 357
>1ll8_A PAS kinase; PAS domain, ligand binding, ligand screening, kinase regulation, transferase; NMR {Homo sapiens} SCOP: d.110.3.5
Probab=99.05 E-value=6.6e-11 Score=108.35 Aligned_cols=102 Identities=15% Similarity=0.209 Sum_probs=75.2
Q ss_pred hcCCcEEEEeCCCCC-CceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHH-HHHc-CCcE---EEEEEEE
Q 002356 197 TFQQTFVVSDATKPD-YPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRE-TLQN-GQSY---CGRLLNY 270 (931)
Q Consensus 197 ~~~~~i~v~D~~~~d-G~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~-~l~~-g~~~---~~e~~~~ 270 (931)
+.+++|+++|. + |+|+++|++|++++||+.+|++|+++..+.++..... ...+.. .+.. +... ..++..+
T Consensus 6 ~~~~~i~~~d~---~~g~I~~~N~aa~~l~G~~~~el~g~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (114)
T 1ll8_A 6 EFNKAIFTVDA---KTTEILVANDKACGLLGYSSQDLIGQKLTQFFLRSDSDV-VEALSEEHMEADGHAAVVFGTVVDII 81 (114)
T ss_dssp TTTCEEEEEET---TTCBEEEECTTHHHHHTCCTTTTTTSBGGGGSSCTTTHH-HHHTTSSTTSSSSCSSCCCSSSEEEC
T ss_pred CCCceEEEEEC---CCCeEEEehHHHHHHhCCCHHHHcCCCHHHhcCcchhHH-HHHHHHHhhccCCcceeccCcEEEEE
Confidence 34579999998 6 7899999999999999999999999887777654332 222222 1111 1111 2245667
Q ss_pred ecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002356 271 KKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (931)
Q Consensus 271 ~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (931)
++||+.+|+.++++|+.+.++ .+++++++|++
T Consensus 82 ~~dG~~~~v~~~~~~~~~~~~--~~~v~~~~~~~ 113 (114)
T 1ll8_A 82 SRSGEKIPVSVWMKRMRQERR--LCCVVVLEPVE 113 (114)
T ss_dssp CTTCCCEEEECCEECCBSSSS--BEEEEEEEECC
T ss_pred ecCCCEEEEEEEEEeeccCCc--cEEEEEEeecC
Confidence 999999999999999987654 36789999986
No 358
>1ll8_A PAS kinase; PAS domain, ligand binding, ligand screening, kinase regulation, transferase; NMR {Homo sapiens} SCOP: d.110.3.5
Probab=99.01 E-value=1e-10 Score=107.15 Aligned_cols=103 Identities=16% Similarity=0.201 Sum_probs=77.7
Q ss_pred hccceEEEEcCC-CCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHH-HHc-CCc---EEEEEEEE
Q 002356 480 RIEKNFVITDPR-LPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAA-IDN-QTD---VTVQLINY 553 (931)
Q Consensus 480 ~~~d~I~v~D~~-G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~-l~~-~~~---~~~e~~~~ 553 (931)
+.+++|+++|.+ |+ |+++|++++++|||+++|++|+++..+++++.... ...+... +.. +.. ...+...+
T Consensus 6 ~~~~~i~~~d~~~g~---I~~~N~aa~~l~G~~~~el~g~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (114)
T 1ll8_A 6 EFNKAIFTVDAKTTE---ILVANDKACGLLGYSSQDLIGQKLTQFFLRSDSDV-VEALSEEHMEADGHAAVVFGTVVDII 81 (114)
T ss_dssp TTTCEEEEEETTTCB---EEEECTTHHHHHTCCTTTTTTSBGGGGSSCTTTHH-HHHTTSSTTSSSSCSSCCCSSSEEEC
T ss_pred CCCceEEEEECCCCe---EEEehHHHHHHhCCCHHHHcCCCHHHhcCcchhHH-HHHHHHHhhccCCcceeccCcEEEEE
Confidence 356899999998 88 99999999999999999999999888888765432 2222221 111 111 13356778
Q ss_pred ecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCc
Q 002356 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSE 588 (931)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITe 588 (931)
++||+.+|+.++++|+.+..+ .+++++++|++.
T Consensus 82 ~~dG~~~~v~~~~~~~~~~~~--~~~v~~~~~~~~ 114 (114)
T 1ll8_A 82 SRSGEKIPVSVWMKRMRQERR--LCCVVVLEPVER 114 (114)
T ss_dssp CTTCCCEEEECCEECCBSSSS--BEEEEEEEECCC
T ss_pred ecCCCEEEEEEEEEeeccCCc--cEEEEEEeecCC
Confidence 999999999999999987654 368899999863
No 359
>3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima}
Probab=99.01 E-value=3.2e-10 Score=125.96 Aligned_cols=136 Identities=15% Similarity=0.110 Sum_probs=99.0
Q ss_pred cHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEE
Q 002356 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (931)
Q Consensus 473 ~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~ 552 (931)
.++.++++++++|+++|.+|+ |+++|++|++++||++++++|+++..+.+++ .....+...+..+.....+.
T Consensus 9 ~~~~i~~~~~~~i~~~d~~g~---i~~~N~a~~~l~G~~~~e~~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-- 80 (349)
T 3a0r_A 9 FSESILESLETAIITLSKDGR---ITEWNKKAEQLFGLKKENVLGRRLKDLPDFE---EIGSVAESVFENKEPVFLNF-- 80 (349)
T ss_dssp CCCSSGGGSSSEEEEEESSSB---CSCBCHHHHHHHSCCSTTTTTCBSTTSTTTT---HHHHHHHHHHHHCCCCEEEC--
T ss_pred HHHHHHhhhcCeEEEECCCCC---EEeeHHHHHHHhCCCHHHHcCcCHHHCcChh---HHHHHHHHHHhcCCceeecc--
Confidence 377899999999999999888 9999999999999999999999987773332 23344445555555433221
Q ss_pred EecCCcEEEEEEEEEeeecCCCCE-EEEEEEEecCCccccccccCCchhhHHHHHHHHHhhhhhhhh
Q 002356 553 YTKSGKKFWNLFHLQPMRDQKGEV-QYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNE 618 (931)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~~-~~~vgi~rDITerk~~e~~~~~~~~~~e~~~~vk~~~~~v~~ 618 (931)
..+..+|+.++..|+.+..|.. .+++++++|||++|+.+......+...+.......+.+.+..
T Consensus 81 --~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DiTe~~~~e~~~~~~~~~~~~~~~~~~i~Helr~ 145 (349)
T 3a0r_A 81 --YKFGERYFNIRFSPFRNAKTQLLEGVIITIDDVTELYKYEEERKRRERLSILGEMTARVAHEIRN 145 (349)
T ss_dssp --CCBTTBCCEEEEEEECCTTTTSSCEEEEEEECCSTTTTTTTTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred --cccCceEEEEEEEEEEcCCCceeeEEEEEEEechHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2223358888999999888775 589999999999999877776555554445554444444443
No 360
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.98 E-value=6.9e-10 Score=117.73 Aligned_cols=134 Identities=13% Similarity=0.080 Sum_probs=99.0
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCC--ccceeEEEEeCCeEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF--VPALYASFQTKTHVCL 746 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpn--Iv~l~~~~~~~~~~~l 746 (931)
..|.+....+.|..+.||++.. .++..+++|+.... ....+..|..+++.+.+.+ +++++.++...+..|+
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~ 92 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWL 92 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEE
T ss_pred CCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEE
Confidence 3555554445666799999964 45678999987543 1234678999998885433 6778988888888999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-----------------------------------
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG----------------------------------- 791 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g----------------------------------- 791 (931)
||||++|.+|. ... .+ ...++.+++..|..||+..
T Consensus 93 v~e~i~G~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
T 1nd4_A 93 LLGEVPGQDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH 162 (264)
T ss_dssp EEECCSSEETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred EEEecCCcccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence 99999998883 211 12 1256677778888888643
Q ss_pred -----------------------CccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 792 -----------------------IIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 792 -----------------------IiHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
++|+|++|.||+++.++.+.|+||+.+.
T Consensus 163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 9999999999999866556799999974
No 361
>2w0n_A Sensor protein DCUS; signal transduction, two-component regulatory system, PAS, kinase, membrane, transferase, solid state cell inner membrane; NMR {Escherichia coli}
Probab=98.97 E-value=1.6e-10 Score=105.19 Aligned_cols=109 Identities=11% Similarity=0.153 Sum_probs=85.3
Q ss_pred cccccchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCC---ChhhhcCCCCCCCCCCCCChHHHHHHHHHH
Q 002356 181 EKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGY---TSKEVVGRNCRFLQGAGTDPEDVAKIRETL 257 (931)
Q Consensus 181 e~~l~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gy---s~eEllG~~~~~l~~~~~~~~~~~~l~~~l 257 (931)
.+++...++.++.++++++++++++|. +|+|+++|++|++++|| +.++++|+++..+.++.. +...+
T Consensus 7 ~~~l~~~~~~~~~il~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~-------~~~~~ 76 (118)
T 2w0n_A 7 PYEISTLFEQRQAMLQSIKEGVVAVDD---RGEVTLINDAAQELLNYRKSQDDEKLSTLSHSWSQVVD-------VSEVL 76 (118)
T ss_dssp HHHHCTTHHHHHHHHHCCCCCCEEEBT---TTBCCCBCHHHHHHHCSCTTTTTSSCCCTTCCCSCTHH-------HHHHH
T ss_pred HHHHHHHHHHHHHHHhhccccEEEECC---CCcEeehhHHHHHHhCCCccChhhhhccCcccccCchh-------HHHHh
Confidence 345777888899999999999999998 77899999999999998 889999999876655421 44555
Q ss_pred HcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002356 258 QNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (931)
Q Consensus 258 ~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (931)
..+....... ...+| .|+.++..|+.+ +|.+.|++++++|||
T Consensus 77 ~~~~~~~~~~--~~~~~--~~~~~~~~p~~~-~g~~~g~v~~~~DiT 118 (118)
T 2w0n_A 77 RDGTPRRDEE--ITIKD--RLLLINTVPVRS-NGVIIGAISTFRDKT 118 (118)
T ss_dssp HTTCCCCCCC--EESSS--CEECCCEECCCC-SSCCCCEEECCCCCC
T ss_pred ccCceeccEE--EEECC--EEEEEeeceeee-CCEEEEEEEEEEeCC
Confidence 5555432211 23456 478888999987 788889999999997
No 362
>3cax_A Uncharacterized protein PF0695; structural genomics, unknown function, PSI-2, protein struct initiative; 2.43A {Pyrococcus furiosus dsm 3638}
Probab=98.96 E-value=9.3e-10 Score=123.59 Aligned_cols=122 Identities=13% Similarity=0.181 Sum_probs=98.2
Q ss_pred ccchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcE
Q 002356 184 LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (931)
Q Consensus 184 l~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~ 263 (931)
.....+.++++|+++++||+++|. +|+|+|+|++ ++++ ++.++++|+++..++++. .......+..++.+|...
T Consensus 234 g~~~~~~l~~IL~~l~dgIivvD~---~g~I~~~N~a-e~i~-~~~~e~iGr~v~~~~p~~-~~~~~~~l~~~l~~g~~~ 307 (369)
T 3cax_A 234 GYLNIEELKAIFEALPVDVTFIDK---DDRVRFFSPG-ERIF-TRTPSVLGRPVQLCHPPK-SVYVVNKILKAFKEGRKK 307 (369)
T ss_dssp CEECHHHHHHHHHHSSSEEEEECT---TSBEEEECCS-SCSS-CCCGGGTTCBTTTSSCGG-GHHHHHHHHHHHHHTSCS
T ss_pred chhhHHHHHHHHHhCCCcEEEECC---CCcEEEEcCH-HHcc-CChHHHcCCcHHHHCChh-hHHHHHHHHHHHHcCCce
Confidence 334556789999999999999998 7889999999 9999 999999999998776543 333445666777777765
Q ss_pred EEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhh
Q 002356 264 CGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (931)
Q Consensus 264 ~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (931)
..+... .++| .|+.++..|++|.+|.+.|++.+++|||+.++++++.+
T Consensus 308 ~~~~~~-~~~g--~~v~v~~~PI~d~~G~~~G~v~v~~DITe~~~le~~rr 355 (369)
T 3cax_A 308 EATFWL-RLRE--KYVYIKYVPLFNEKGEYIGTLEMTMDIAPYKKIEGEKR 355 (369)
T ss_dssp CEEEEE-EETT--EEEEEEEEEEECTTSCEEEEEEEEEECHHHHTCCSCCC
T ss_pred EEEEEE-eeCC--EEEEEEEEEEECCCCCEEEEEEEEEcCHHHHHHHHHhH
Confidence 444443 3456 47889999999999999999999999999988876644
No 363
>3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima}
Probab=98.96 E-value=4.2e-10 Score=125.00 Aligned_cols=121 Identities=11% Similarity=0.112 Sum_probs=90.0
Q ss_pred ccchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcE
Q 002356 184 LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (931)
Q Consensus 184 l~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~ 263 (931)
++.+++.++.++++++++|+++|. +|+|+++|++|++++||+.++++|+++..+.++ ......+...+..+...
T Consensus 3 l~~~~~~~~~i~~~~~~~i~~~d~---~g~i~~~N~a~~~l~G~~~~e~~G~~~~~~~~~---~~~~~~~~~~~~~~~~~ 76 (349)
T 3a0r_A 3 VEHLRNFSESILESLETAIITLSK---DGRITEWNKKAEQLFGLKKENVLGRRLKDLPDF---EEIGSVAESVFENKEPV 76 (349)
T ss_dssp ------CCCSSGGGSSSEEEEEES---SSBCSCBCHHHHHHHSCCSTTTTTCBSTTSTTT---THHHHHHHHHHHHCCCC
T ss_pred hHHHHHHHHHHHhhhcCeEEEECC---CCCEEeeHHHHHHHhCCCHHHHcCcCHHHCcCh---hHHHHHHHHHHhcCCce
Confidence 445566778899999999999998 788999999999999999999999998866332 23334455556666554
Q ss_pred EEEEEEEecCCcEEEEEEEeeeeecCCCCE-EEEEEEEecchhhhHHHHHhh
Q 002356 264 CGRLLNYKKDGTPFWNLLTIAPIKDDEGKV-LKFIGMQVEVSKHTEGAKDKM 314 (931)
Q Consensus 264 ~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v-~~~v~~~~DITerk~~e~~L~ 314 (931)
.... ..+...|+.+++.|+.+.+|.. .|++++++|||++++++++++
T Consensus 77 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DiTe~~~~e~~~~ 124 (349)
T 3a0r_A 77 FLNF----YKFGERYFNIRFSPFRNAKTQLLEGVIITIDDVTELYKYEEERK 124 (349)
T ss_dssp EEEC----CCBTTBCCEEEEEEECCTTTTSSCEEEEEEECCSTTTTTTTTTT
T ss_pred eecc----cccCceEEEEEEEEEEcCCCceeeEEEEEEEechHHHHHHHHHH
Confidence 3221 2223358889999999988775 589999999999999887765
No 364
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.95 E-value=9.7e-10 Score=123.08 Aligned_cols=142 Identities=18% Similarity=0.261 Sum_probs=106.7
Q ss_pred ccccccccccCcEEEEEEEEecCCeEEEEEEee--cccccChHHHHHHHHHHHHHHhcC--CCCccceeEEEEeC---Ce
Q 002356 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD--KGVMLNRNKVHRACAEREILDMLD--HPFVPALYASFQTK---TH 743 (931)
Q Consensus 671 y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~--~~~~~~~~~~~~~~~E~~il~~l~--hpnIv~l~~~~~~~---~~ 743 (931)
...++.|+.|.++.||++... +..+++|... .... ......+.+|..+++.|. +..+++++.++.+. +.
T Consensus 40 ~~~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~--~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~ 115 (359)
T 3dxp_A 40 PLSVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKL--LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGR 115 (359)
T ss_dssp CCEEEECCC-CCSCEEEEECS--SCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSS
T ss_pred CceEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCC--CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCC
Confidence 344677899999999999863 4678899765 3321 122356778999999996 45678899888766 45
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC---------------------------------- 789 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~---------------------------------- 789 (931)
.|+||||++|..+.+.. ...++......++.+++..|..||+
T Consensus 116 ~~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (359)
T 3dxp_A 116 AFYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET 191 (359)
T ss_dssp CEEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred eEEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence 89999999988875421 1237788889999999999999997
Q ss_pred ------------------------CCCccCCCCCCcEEEecCCc--EEEEeccCCcc
Q 002356 790 ------------------------QGIIYRDLKPENVLLQGNGH--VSLTDFDLSCL 820 (931)
Q Consensus 790 ------------------------~gIiHrDIKP~NIll~~~g~--vkL~DFG~a~~ 820 (931)
.+++|+|++|.|||++.++. +.|+||+.+..
T Consensus 192 ~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 192 ESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp SCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred cCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 36899999999999997753 68999999854
No 365
>3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A*
Probab=98.92 E-value=8.5e-09 Score=88.80 Aligned_cols=95 Identities=12% Similarity=0.046 Sum_probs=73.0
Q ss_pred cCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEE
Q 002356 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (931)
Q Consensus 198 ~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~ 277 (931)
++++++++|. +|+|+++|+++++++||+.++++|+++..+ +. .......+...+..+..+.. .. .+|...
T Consensus 1 ~~~~i~~~d~---~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~ 70 (96)
T 3a0s_A 1 METAIITLSK---DGRITEWNKKAEQLFGLKKENVLGRRLKDL--PD-FEEIGSVAESVFENKEPVFL--NF--YKFGER 70 (96)
T ss_dssp CCCEEEEEET---TSBEEEECHHHHHHHCCCHHHHTTSBGGGS--TT-CHHHHHHHHHHHHHTCCEEE--EE--EEETTE
T ss_pred CCceEEEEcC---CCCEeehhHHHHHHhCCCHHHhcCCCHHHC--cc-hHHHHHHHHHHhccCCeEEE--EE--EcCCcE
Confidence 4789999998 778999999999999999999999998766 22 23444556666666666532 22 234456
Q ss_pred EEEEEeeeeecCCCC-EEEEEEEEec
Q 002356 278 WNLLTIAPIKDDEGK-VLKFIGMQVE 302 (931)
Q Consensus 278 w~~~~~~pi~d~~G~-v~~~v~~~~D 302 (931)
|+.+++.|+.+.+|+ +.+++++++|
T Consensus 71 ~~~~~~~p~~~~~~~~~~g~v~~~~D 96 (96)
T 3a0s_A 71 YFNIRFSPFRNAKTQLLEGVIITIDD 96 (96)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEEEEC
T ss_pred EEEEEEEEeEcCCCCeeeEEEEEecC
Confidence 999999999988665 6799999887
No 366
>2ykf_A Pdtas, probable sensor histidine kinase pdtas; transferase, two-component system, GAF domain, PAS domain; 2.00A {Mycobacterium tuberculosis} PDB: 2ykh_A
Probab=98.38 E-value=2.4e-10 Score=124.80 Aligned_cols=112 Identities=15% Similarity=0.070 Sum_probs=77.7
Q ss_pred HHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcC---CChhhhcCCCCCCCCCCC---CCH--HHHHHHHHHHHc-CCc
Q 002356 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTE---YSREEILGRNCRFLQGPE---TDP--ATVRKIRAAIDN-QTD 545 (931)
Q Consensus 475 ~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~G---ys~eEllG~~~~~l~~~~---~~~--~~~~~l~~~l~~-~~~ 545 (931)
+.+++++++||+++|.+|+ |+++|++++++|| ++ ++++|++...+.+.. ... .+...+...+.. +..
T Consensus 173 ~~~~~~~~dGIivvD~~G~---Ii~~N~aA~~ll~~lG~~-~~~iGk~l~el~~~~~~~~~~~~~~~~~l~~vl~~~~~~ 248 (305)
T 2ykf_A 173 SRSSPRAGDGFIRLDVDGV---VSYASPNALSAYHRMGLT-TELEGVNLIDATRPLISDPFEAHEVDEHVQDLLAGDGKG 248 (305)
Confidence 4578899999999999988 9999999999985 54 789999987776543 100 112222223333 322
Q ss_pred EEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccccccC
Q 002356 546 VTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (931)
Q Consensus 546 ~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e~~~ 596 (931)
...+.. .+| .++.++..|+++ +|++.|++.+++|||+.++.|++.
T Consensus 249 ~~~ei~---~~~--~~l~v~~~Pi~~-~g~~~G~Vvv~rDITE~~~lE~eL 293 (305)
T 2ykf_A 249 MRMEVD---AGG--ATVLLRTLPLVV-AGRNVGAAILIRDVTEVKRRDRAL 293 (305)
Confidence 222221 123 467788899986 578889999999999999865444
No 367
>3cax_A Uncharacterized protein PF0695; structural genomics, unknown function, PSI-2, protein struct initiative; 2.43A {Pyrococcus furiosus dsm 3638}
Probab=98.85 E-value=4.9e-09 Score=117.72 Aligned_cols=115 Identities=16% Similarity=0.166 Sum_probs=93.4
Q ss_pred cHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEE
Q 002356 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (931)
Q Consensus 473 ~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~ 552 (931)
.++.+++++++||+++|.+|+ |+++|++ +++| ++.++++|+++..++++. .....+.+...+..+.....+...
T Consensus 240 ~l~~IL~~l~dgIivvD~~g~---I~~~N~a-e~i~-~~~~e~iGr~v~~~~p~~-~~~~~~~l~~~l~~g~~~~~~~~~ 313 (369)
T 3cax_A 240 ELKAIFEALPVDVTFIDKDDR---VRFFSPG-ERIF-TRTPSVLGRPVQLCHPPK-SVYVVNKILKAFKEGRKKEATFWL 313 (369)
T ss_dssp HHHHHHHHSSSEEEEECTTSB---EEEECCS-SCSS-CCCGGGTTCBTTTSSCGG-GHHHHHHHHHHHHHTSCSCEEEEE
T ss_pred HHHHHHHhCCCcEEEECCCCc---EEEEcCH-HHcc-CChHHHcCCcHHHHCChh-hHHHHHHHHHHHHcCCceEEEEEE
Confidence 388999999999999999988 9999999 9999 899999999988776643 333445566677777664445444
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccccccC
Q 002356 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (931)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e~~~ 596 (931)
. .+| .++.++..|++|.+|++.|++.+++|||+.++.+..+
T Consensus 314 ~-~~g--~~v~v~~~PI~d~~G~~~G~v~v~~DITe~~~le~~r 354 (369)
T 3cax_A 314 R-LRE--KYVYIKYVPLFNEKGEYIGTLEMTMDIAPYKKIEGEK 354 (369)
T ss_dssp E-ETT--EEEEEEEEEEECTTSCEEEEEEEEEECHHHHTCCSCC
T ss_pred e-eCC--EEEEEEEEEEECCCCCEEEEEEEEEcCHHHHHHHHHh
Confidence 3 456 4788899999999999999999999999998865544
No 368
>3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A*
Probab=98.85 E-value=2e-08 Score=86.38 Aligned_cols=95 Identities=17% Similarity=0.138 Sum_probs=72.8
Q ss_pred ccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCcEE
Q 002356 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKF 560 (931)
Q Consensus 481 ~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~ 560 (931)
++++|+++|.+|+ |+++|+++++++|++.++++|++...+ +. .......+...+..+..+.. .. .+|..+
T Consensus 1 ~~~~i~~~d~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~ 70 (96)
T 3a0s_A 1 METAIITLSKDGR---ITEWNKKAEQLFGLKKENVLGRRLKDL--PD-FEEIGSVAESVFENKEPVFL--NF--YKFGER 70 (96)
T ss_dssp CCCEEEEEETTSB---EEEECHHHHHHHCCCHHHHTTSBGGGS--TT-CHHHHHHHHHHHHHTCCEEE--EE--EEETTE
T ss_pred CCceEEEEcCCCC---EeehhHHHHHHhCCCHHHhcCCCHHHC--cc-hHHHHHHHHHHhccCCeEEE--EE--EcCCcE
Confidence 4789999999888 999999999999999999999997777 32 23444555666666655432 22 234446
Q ss_pred EEEEEEEeeecCCCC-EEEEEEEEec
Q 002356 561 WNLFHLQPMRDQKGE-VQYFIGVQLD 585 (931)
Q Consensus 561 wv~~~~~pi~d~~G~-~~~~vgi~rD 585 (931)
|+.+++.|+.+.+|+ +.+++++++|
T Consensus 71 ~~~~~~~p~~~~~~~~~~g~v~~~~D 96 (96)
T 3a0s_A 71 YFNIRFSPFRNAKTQLLEGVIITIDD 96 (96)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEEEEC
T ss_pred EEEEEEEEeEcCCCCeeeEEEEEecC
Confidence 999999999988665 6789999887
No 369
>1nwz_A PYP, photoactive yellow protein; PAS, LOV, GAF, domains fold, signaling protein; HET: HC4; 0.82A {Halorhodospira halophila} SCOP: d.110.3.1 PDB: 1kou_A* 1ot9_A* 1otb_A* 1s4r_A* 1s4s_A* 1ts0_A* 1ts6_A* 1ts7_A* 1ts8_A* 1uwn_X* 1uwp_X* 2d01_A* 2phy_A* 2pyp_A* 2pyr_A* 2qj5_A* 2qj7_A* 2qws_A* 2zoh_A* 2zoi_A* ...
Probab=98.84 E-value=2.1e-08 Score=93.05 Aligned_cols=100 Identities=20% Similarity=0.193 Sum_probs=78.4
Q ss_pred HHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCC-CCCCCCChHHHHHHHHHHHcCCcEEEEEEE-
Q 002356 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRF-LQGAGTDPEDVAKIRETLQNGQSYCGRLLN- 269 (931)
Q Consensus 192 ~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~-l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~- 269 (931)
..++++++.|++++|. +|+|++||+++++++||++++++|+++.. +.+......+...+.+.++.|. +..++.+
T Consensus 20 ~~~ld~l~~Gii~lD~---~g~I~~~N~~~e~~sG~~~~eviGk~~f~~~~~~~~~~~f~~rf~~~~~~g~-l~~~~~~v 95 (125)
T 1nwz_A 20 DGQLDGLAFGAIQLDG---DGNILQYNAAEGDITGRDPKQVIGKNFFKDVAPCTDSPEFYGKFKEGVASGN-LNTMFEYT 95 (125)
T ss_dssp HHHHTTCSSEEEEEET---TCBEEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHHTC-CEEEEEEE
T ss_pred HHHHhccCceEEEECC---CCEEEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc-eeEEEEEE
Confidence 4579999999999998 88899999999999999999999999875 4444456677788888888776 4444444
Q ss_pred EecCCcEEEEEEEeeeeecCCCCEEEEE
Q 002356 270 YKKDGTPFWNLLTIAPIKDDEGKVLKFI 297 (931)
Q Consensus 270 ~~kdG~~~w~~~~~~pi~d~~G~v~~~v 297 (931)
.+++|+.+ .+++++..+.+|...++.
T Consensus 96 ~~~~~~p~--~v~i~l~~~~~~~~~~i~ 121 (125)
T 1nwz_A 96 FDYQMTPT--KVKVHMKKALSGDSYWVF 121 (125)
T ss_dssp ECTTSCCE--EEEEEEEECSSSSEEEEE
T ss_pred EcCCCCEE--EEEEEEEEcCCCCEEEEE
Confidence 49999954 555566677888876543
No 370
>2w0n_A Sensor protein DCUS; signal transduction, two-component regulatory system, PAS, kinase, membrane, transferase, solid state cell inner membrane; NMR {Escherichia coli}
Probab=98.83 E-value=7.7e-10 Score=100.58 Aligned_cols=101 Identities=19% Similarity=0.175 Sum_probs=78.8
Q ss_pred ccHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCC---ChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEE
Q 002356 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEY---SREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (931)
Q Consensus 472 ~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gy---s~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~ 548 (931)
..++.++++++++|+++|.+|+ |+++|+++++++|| +.++++|+++..+.++.. +...+..+.....
T Consensus 15 ~~~~~il~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~ 84 (118)
T 2w0n_A 15 EQRQAMLQSIKEGVVAVDDRGE---VTLINDAAQELLNYRKSQDDEKLSTLSHSWSQVVD-------VSEVLRDGTPRRD 84 (118)
T ss_dssp HHHHHHHHCCCCCCEEEBTTTB---CCCBCHHHHHHHCSCTTTTTSSCCCTTCCCSCTHH-------HHHHHHTTCCCCC
T ss_pred HHHHHHHhhccccEEEECCCCc---EeehhHHHHHHhCCCccChhhhhccCcccccCchh-------HHHHhccCceecc
Confidence 4589999999999999999888 99999999999998 889999999877765532 3344444443221
Q ss_pred EEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCC
Q 002356 549 QLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (931)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDIT 587 (931)
+. ...+| .|+.++..|+.+ +|++.+++++++|||
T Consensus 85 ~~--~~~~~--~~~~~~~~p~~~-~g~~~g~v~~~~DiT 118 (118)
T 2w0n_A 85 EE--ITIKD--RLLLINTVPVRS-NGVIIGAISTFRDKT 118 (118)
T ss_dssp CC--EESSS--CEECCCEECCCC-SSCCCCEEECCCCCC
T ss_pred EE--EEECC--EEEEEeeceeee-CCEEEEEEEEEEeCC
Confidence 11 23456 477888899987 788889999999998
No 371
>1mzu_A PPR; photoactive yellow protein, PAS, PYP, signaling protein; HET: HC4; 2.00A {Rhodospirillum centenum} SCOP: d.110.3.1
Probab=98.82 E-value=2.1e-08 Score=93.26 Aligned_cols=99 Identities=12% Similarity=0.093 Sum_probs=77.7
Q ss_pred HHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCC-CCCCCCChHHHHHHHHHHHcCCcEEEEEEE-E
Q 002356 193 DALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRF-LQGAGTDPEDVAKIRETLQNGQSYCGRLLN-Y 270 (931)
Q Consensus 193 ~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~-l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~-~ 270 (931)
.++++++.|++++|. +|+|++||++++++.||++++++|+++.. +.+......+...+.+.++.|. +..++.+ .
T Consensus 26 ~~ld~l~~GiivlD~---dg~I~~~N~~~e~isG~s~eeviGk~~f~~~~p~~~~~~f~grf~~~~~~G~-l~~~~~yv~ 101 (129)
T 1mzu_A 26 AEFDALPVGAIQVDG---SGVIHRYNRTESRLSGRIPERVIGRNFFTEVAPCTNIPAFSGRFMDGVTSGT-LDARFDFVF 101 (129)
T ss_dssp TTGGGCSSEEEEEET---TCBEEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHTSC-CEEEEEEEE
T ss_pred HHHhccCceEEEECC---CCeEEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc-eeEEEEEEE
Confidence 369999999999998 78899999999999999999999999875 4444456677788888888766 4444444 4
Q ss_pred ecCCcEEEEEEEeeeeecCCCCEEEEE
Q 002356 271 KKDGTPFWNLLTIAPIKDDEGKVLKFI 297 (931)
Q Consensus 271 ~kdG~~~w~~~~~~pi~d~~G~v~~~v 297 (931)
+++|+. +.+++++..+.+|...+++
T Consensus 102 ~~~~~p--~~v~i~l~~~~~~~~~~i~ 126 (129)
T 1mzu_A 102 DFQMAP--VRVQIRMQNAGVPDRYWIF 126 (129)
T ss_dssp ECSSCE--EEEEEEEEECSSTTEEEEE
T ss_pred cCCCCE--EEEEEEEEEcCCCCEEEEE
Confidence 899995 5555566677888876543
No 372
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.82 E-value=3.9e-09 Score=115.26 Aligned_cols=198 Identities=16% Similarity=0.207 Sum_probs=125.4
Q ss_pred cccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCC--ccceeEEEEeCC---eEEEE
Q 002356 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPF--VPALYASFQTKT---HVCLI 747 (931)
Q Consensus 674 ~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpn--Iv~l~~~~~~~~---~~~lV 747 (931)
++.++.|.++.||++. ..+++|+.... .....+.+|..+|+.+ .+.. ++.++....... ..|+|
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 4558999999999874 35889975432 3456788999999888 4433 455555443333 34899
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-------------------------------------- 789 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-------------------------------------- 789 (931)
|++++|.+|...... .++.+....++.+++..|..||+
T Consensus 95 m~~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 95 FTKIKGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp EECCCCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred EcccCCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 999999988764432 27778888889999999999996
Q ss_pred --------------------CCCccCCCCCCcEEEec--CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccc
Q 002356 790 --------------------QGIIYRDLKPENVLLQG--NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 847 (931)
Q Consensus 790 --------------------~gIiHrDIKP~NIll~~--~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (931)
..++|+|++|.||+++. ++.+.|+||+.+......... ........ .
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl--------~~~~~~~~--~- 239 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDF--------ISLMEDDE--E- 239 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHH--------HTTCCTTT--S-
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHH--------HHHHhhcc--c-
Confidence 13699999999999997 456789999998543210000 00000000 0
Q ss_pred cccccccccccccCCcccc-hhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 848 MAEPMRASNSFVGTEEYIA-PEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 848 ~~~~~~~~~~~~Gt~~y~a-PE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.. ......+....+... |+..... ....+.|++|.++|.+.+|..+|-.
T Consensus 240 ~~--~~~~~~~l~~Y~~~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 240 YG--MEFVSKILNHYKHKDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp CC--HHHHHHHHHHHTCSCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cC--HHHHHHHHHHcCCCCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 00 000000111111222 3332211 1246899999999999999988843
No 373
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=98.78 E-value=5.7e-09 Score=105.10 Aligned_cols=108 Identities=12% Similarity=0.095 Sum_probs=81.4
Q ss_pred cchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCC--c
Q 002356 185 PRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ--S 262 (931)
Q Consensus 185 ~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~--~ 262 (931)
++....++.+++++++|++++|. +|+|+++|+++++++|++.++++|+++..+.++.. +...+..+. .
T Consensus 76 ~~~~~~l~~il~~~~~gvi~~D~---~g~I~~~N~aa~~llg~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~ 145 (190)
T 2jhe_A 76 EREHLALSALLEALPEPVLSVDM---KSKVDMANPASCQLFGQKLDRLRNHTAAQLINGFN-------FLRWLESEPQDS 145 (190)
T ss_dssp THHHHHHHHHHHHCSSCEEEECT---TCBEEEECHHHHHHHTSCHHHHTTSBGGGTSTTCC-------HHHHHHTCCCSC
T ss_pred HHHHHHHHHHHHhCCCcEEEEcC---CCCEEEEcHHHHHHhCCCHHHhcCccHHHHhCCCC-------HHHHHhcCCCCC
Confidence 44557899999999999999998 78899999999999999999999999887765532 123344443 2
Q ss_pred EEEEEEEEecCCcEEEEEEEeeeeecCCCC----EEEEEEEEecchhhh
Q 002356 263 YCGRLLNYKKDGTPFWNLLTIAPIKDDEGK----VLKFIGMQVEVSKHT 307 (931)
Q Consensus 263 ~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~----v~~~v~~~~DITerk 307 (931)
...++. .+|. ++.++++|+.+.+|. +.|++.+++|||+++
T Consensus 146 ~~~~~~---~~g~--~~~~~~~pi~~~~~~~~~~~~g~v~~~~DiTe~~ 189 (190)
T 2jhe_A 146 HNEHVV---INGQ--NFLMEITPVYLQDENDQHVLTGAVVMLRSTIRMG 189 (190)
T ss_dssp EEEEEE---ETTE--EEEEEEEEETTTTEEEEEEEE-HHHHHHHHTTTC
T ss_pred cceEEE---ECCe--EEEEEEEEEEecCCCCcceEEeEEEEEeccchhc
Confidence 333332 2675 456778899875665 788899999999875
No 374
>3rty_A Period circadian protein; PAS domain, signalling, timeless, circadian clock protein; 2.85A {Drosophila melanogaster} PDB: 1wa9_A 3gec_A
Probab=98.78 E-value=1.2e-08 Score=112.42 Aligned_cols=106 Identities=10% Similarity=0.030 Sum_probs=90.9
Q ss_pred CCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCc-----EEEEEEEEecC
Q 002356 199 QQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS-----YCGRLLNYKKD 273 (931)
Q Consensus 199 ~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~-----~~~e~~~~~kd 273 (931)
.+.++..+. ||+++|+|+++..++||+++|++|+++..++||++.......++..+..|.. ...+++.+++|
T Consensus 154 ~~fi~r~~~---dG~~~yvn~~~~~lLGY~peELiG~s~~~~vHPdD~~~~~~~~~~~l~~G~~~~~~~~s~~yR~~~kd 230 (339)
T 3rty_A 154 PKFAIRHTA---TGIISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQN 230 (339)
T ss_dssp CEEEEEEET---TCBEEEECTTHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHTTSTTCCCBCCCEEEECTT
T ss_pred ceEEEEECC---CCeEEEcChhhhcccCCCHHHHcCCcHHHEECHHHHHHHHHHHHHHHHcCCcccccccceEEEEEccC
Confidence 455666666 8889999999999999999999999999999999988888888888877664 35689999999
Q ss_pred CcEEEEEEEeeeeecCC-CCEEEEEEEEecchhhh
Q 002356 274 GTPFWNLLTIAPIKDDE-GKVLKFIGMQVEVSKHT 307 (931)
Q Consensus 274 G~~~w~~~~~~pi~d~~-G~v~~~v~~~~DITerk 307 (931)
|+.+|++.+.++++|.. +.+.+++++.+.|+...
T Consensus 231 G~~vWlet~~~~~~np~s~~~~~II~~h~vi~~p~ 265 (339)
T 3rty_A 231 GCYVLLETEWTSFVNPWSRKLEFVVGHHRVFQGPK 265 (339)
T ss_dssp SCEEEEEEEEEEEECTTTCSEEEEEEEEEEEECCS
T ss_pred CCEEEEEEEEEEEECCCCCCeeEEEEEEEECCCCC
Confidence 99999999999999875 56778899998887653
No 375
>2ykf_A Pdtas, probable sensor histidine kinase pdtas; transferase, two-component system, GAF domain, PAS domain; 2.00A {Mycobacterium tuberculosis} PDB: 2ykh_A
Probab=98.25 E-value=7.5e-10 Score=120.83 Aligned_cols=181 Identities=14% Similarity=0.109 Sum_probs=117.7
Q ss_pred HHHHHHHhceeecccCCC-CCcceeEeccCCCCCCCCCCCccCCCCCcceEEEe-ccccc---ccccccccchHHHHHHH
Q 002356 120 AAQRAAEWGLVLKTDTET-GKPQAVVARTSGGDDPNGKPGTSRRNSNNSVRSSG-EMSDE---GGKEKGLPRVSDIVKDA 194 (931)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-dit~~---~~~e~~l~~~~~~~~~i 194 (931)
+..+|.+-|..++..... ++ ..|.++ ...+..|+.+.....+.++... |+++. +..|.+..+..+.|..+
T Consensus 84 ~v~~~~~~g~~~~~~~~~~~~----~~~~~~-v~~~~~Pi~~~g~vigvl~~~~~di~~~~~~~~~e~~~~~~~~~L~~m 158 (305)
T 2ykf_A 84 LVAATFSGGVPGREGAVGQQN----SCQHDG-HSVEVSPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRM 158 (305)
Confidence 456677777555333321 11 113444 5566777776554445556668 99986 44555555565666665
Q ss_pred HH-----------------hcCCcEEEEeCCCCCCceEEcchHHHHHhC---CChhhhcCCCCCCCCCCC---C-Ch-HH
Q 002356 195 LS-----------------TFQQTFVVSDATKPDYPIMYASAGFFKMTG---YTSKEVVGRNCRFLQGAG---T-DP-ED 249 (931)
Q Consensus 195 le-----------------~~~~~i~v~D~~~~dG~I~~~N~a~~~l~G---ys~eEllG~~~~~l~~~~---~-~~-~~ 249 (931)
++ .+++||+++|. +|+|+++|+++++++| ++ ++++|+++..+.+.. . .. ..
T Consensus 159 i~~~~~~~~~~~~~~~~~~~~~dGIivvD~---~G~Ii~~N~aA~~ll~~lG~~-~~~iGk~l~el~~~~~~~~~~~~~~ 234 (305)
T 2ykf_A 159 LAEGTFPDAGDVAMSRSSPRAGDGFIRLDV---DGVVSYASPNALSAYHRMGLT-TELEGVNLIDATRPLISDPFEAHEV 234 (305)
Confidence 54 89999999998 7779999999999985 55 789999987665432 1 00 12
Q ss_pred HHHHHHHHHc-CCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhc
Q 002356 250 VAKIRETLQN-GQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (931)
Q Consensus 250 ~~~l~~~l~~-g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~ 315 (931)
...+..++.+ +.....++ ..+| .++.++..|+.+ +|++.|++.+++|||+.++.|++|+.
T Consensus 235 ~~~l~~vl~~~~~~~~~ei---~~~~--~~l~v~~~Pi~~-~g~~~G~Vvv~rDITE~~~lE~eL~~ 295 (305)
T 2ykf_A 235 DEHVQDLLAGDGKGMRMEV---DAGG--ATVLLRTLPLVV-AGRNVGAAILIRDVTEVKRRDRALIS 295 (305)
Confidence 2222334443 33322222 1223 467888899986 57888999999999999999999874
No 376
>1nwz_A PYP, photoactive yellow protein; PAS, LOV, GAF, domains fold, signaling protein; HET: HC4; 0.82A {Halorhodospira halophila} SCOP: d.110.3.1 PDB: 1kou_A* 1ot9_A* 1otb_A* 1s4r_A* 1s4s_A* 1ts0_A* 1ts6_A* 1ts7_A* 1ts8_A* 1uwn_X* 1uwp_X* 2d01_A* 2phy_A* 2pyp_A* 2pyr_A* 2qj5_A* 2qj7_A* 2qws_A* 2zoh_A* 2zoi_A* ...
Probab=98.71 E-value=7.9e-08 Score=89.22 Aligned_cols=99 Identities=9% Similarity=0.078 Sum_probs=77.7
Q ss_pred HHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCC-CCCCCHHHHHHHHHHHHcCCcEEEEEEE-
Q 002356 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ-GPETDPATVRKIRAAIDNQTDVTVQLIN- 552 (931)
Q Consensus 475 ~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~-~~~~~~~~~~~l~~~l~~~~~~~~e~~~- 552 (931)
..++++++.|++++|.+|+ |++||.++++++||++++++|+++...+ +......+...+.+.+..|. ...+..+
T Consensus 20 ~~~ld~l~~Gii~lD~~g~---I~~~N~~~e~~sG~~~~eviGk~~f~~~~~~~~~~~f~~rf~~~~~~g~-l~~~~~~v 95 (125)
T 1nwz_A 20 DGQLDGLAFGAIQLDGDGN---ILQYNAAEGDITGRDPKQVIGKNFFKDVAPCTDSPEFYGKFKEGVASGN-LNTMFEYT 95 (125)
T ss_dssp HHHHTTCSSEEEEEETTCB---EEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHHTC-CEEEEEEE
T ss_pred HHHHhccCceEEEECCCCE---EEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc-eeEEEEEE
Confidence 6689999999999999888 9999999999999999999999986644 44455566777888777666 4544444
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEE
Q 002356 553 YTKSGKKFWNLFHLQPMRDQKGEVQYF 579 (931)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~~~~~ 579 (931)
++++|+ ++.++++...+.+|...++
T Consensus 96 ~~~~~~--p~~v~i~l~~~~~~~~~~i 120 (125)
T 1nwz_A 96 FDYQMT--PTKVKVHMKKALSGDSYWV 120 (125)
T ss_dssp ECTTSC--CEEEEEEEEECSSSSEEEE
T ss_pred EcCCCC--EEEEEEEEEEcCCCCEEEE
Confidence 489999 5555666777788876654
No 377
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=98.70 E-value=1.3e-08 Score=102.55 Aligned_cols=104 Identities=11% Similarity=0.056 Sum_probs=79.3
Q ss_pred cHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCC--cEEEEE
Q 002356 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQT--DVTVQL 550 (931)
Q Consensus 473 ~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~--~~~~e~ 550 (931)
.++.+++++++||+++|.+|+ |+++|++++++||++.++++|+++..+.++... ...+..+. ....++
T Consensus 81 ~l~~il~~~~~gvi~~D~~g~---I~~~N~aa~~llg~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 150 (190)
T 2jhe_A 81 ALSALLEALPEPVLSVDMKSK---VDMANPASCQLFGQKLDRLRNHTAAQLINGFNF-------LRWLESEPQDSHNEHV 150 (190)
T ss_dssp HHHHHHHHCSSCEEEECTTCB---EEEECHHHHHHHTSCHHHHTTSBGGGTSTTCCH-------HHHHHTCCCSCEEEEE
T ss_pred HHHHHHHhCCCcEEEEcCCCC---EEEEcHHHHHHhCCCHHHhcCccHHHHhCCCCH-------HHHHhcCCCCCcceEE
Confidence 489999999999999999888 999999999999999999999998887765432 12333333 233333
Q ss_pred EEEecCCcEEEEEEEEEeeecCCCC----EEEEEEEEecCCcccc
Q 002356 551 INYTKSGKKFWNLFHLQPMRDQKGE----VQYFIGVQLDGSEHLE 591 (931)
Q Consensus 551 ~~~~kdG~~~wv~~~~~pi~d~~G~----~~~~vgi~rDITerk~ 591 (931)
.. +|. ++.+++.|+.+.+|+ +.|++.+++|||++++
T Consensus 151 ~~---~g~--~~~~~~~pi~~~~~~~~~~~~g~v~~~~DiTe~~~ 190 (190)
T 2jhe_A 151 VI---NGQ--NFLMEITPVYLQDENDQHVLTGAVVMLRSTIRMGR 190 (190)
T ss_dssp EE---TTE--EEEEEEEEETTTTEEEEEEEE-HHHHHHHHTTTCC
T ss_pred EE---CCe--EEEEEEEEEEecCCCCcceEEeEEEEEeccchhcC
Confidence 32 675 456778899876665 7788889999999874
No 378
>1mzu_A PPR; photoactive yellow protein, PAS, PYP, signaling protein; HET: HC4; 2.00A {Rhodospirillum centenum} SCOP: d.110.3.1
Probab=98.68 E-value=1e-07 Score=88.62 Aligned_cols=99 Identities=10% Similarity=0.016 Sum_probs=77.1
Q ss_pred HHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCC-CCCCCHHHHHHHHHHHHcCCcEEEEEEE-
Q 002356 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ-GPETDPATVRKIRAAIDNQTDVTVQLIN- 552 (931)
Q Consensus 475 ~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~-~~~~~~~~~~~l~~~l~~~~~~~~e~~~- 552 (931)
..++++++.||+++|.+|+ |++||.++++++||++++++|+++...+ +......+...+.+.+..+. ...+..+
T Consensus 25 ~~~ld~l~~GiivlD~dg~---I~~~N~~~e~isG~s~eeviGk~~f~~~~p~~~~~~f~grf~~~~~~G~-l~~~~~yv 100 (129)
T 1mzu_A 25 TAEFDALPVGAIQVDGSGV---IHRYNRTESRLSGRIPERVIGRNFFTEVAPCTNIPAFSGRFMDGVTSGT-LDARFDFV 100 (129)
T ss_dssp CTTGGGCSSEEEEEETTCB---EEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHTSC-CEEEEEEE
T ss_pred HHHHhccCceEEEECCCCe---EEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc-eeEEEEEE
Confidence 4468999999999999888 9999999999999999999999986644 44455566777888888666 4544444
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEE
Q 002356 553 YTKSGKKFWNLFHLQPMRDQKGEVQYF 579 (931)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~~~~~ 579 (931)
++++|+ ++.++++...+.+|...++
T Consensus 101 ~~~~~~--p~~v~i~l~~~~~~~~~~i 125 (129)
T 1mzu_A 101 FDFQMA--PVRVQIRMQNAGVPDRYWI 125 (129)
T ss_dssp EECSSC--EEEEEEEEEECSSTTEEEE
T ss_pred EcCCCC--EEEEEEEEEEcCCCCEEEE
Confidence 489999 5555666677788876654
No 379
>4dj3_A Period circadian protein homolog 3; PAS domain, circadian rhythm, protein binding; 2.50A {Mus musculus}
Probab=98.63 E-value=1.3e-07 Score=103.17 Aligned_cols=98 Identities=13% Similarity=0.111 Sum_probs=83.9
Q ss_pred CCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCc---EEEEEEEEecCCcEEEEEEEee
Q 002356 208 TKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS---YCGRLLNYKKDGTPFWNLLTIA 284 (931)
Q Consensus 208 ~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~---~~~e~~~~~kdG~~~w~~~~~~ 284 (931)
.+.||+++|+|+++..++||.++|++|+++..++||++.....+.+.+.+..++. ...++|.++|||..+|++...+
T Consensus 180 h~~dG~~~yvs~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~~~~~f~s~~yR~~~kdG~~vwvet~~~ 259 (317)
T 4dj3_A 180 HTPGCVFLEVDERAVPLLGYLPQDLIGTSILTYLHPEDRPLMVAIHQKVLKYAGHPPFEHSPVRFCTQNGEYVILDSSWS 259 (317)
T ss_dssp ECTTSBEEEECTTHHHHHSCCHHHHTTSBGGGGBCTTTTTHHHHHHHHHHHTTTSCCEECCCEEEECTTSCEEEEEEEEE
T ss_pred ecCCCeEEEEChHHhhhcCcChHHHcCCCHHHeECHHHHHHHHHHHHHHHHcCCCccccceEEEEEccCCCEEEEEEEEE
Confidence 3448999999999999999999999999999999999998888888888887664 3578999999999999999999
Q ss_pred eeecC-CCCEEEEEEEEecchh
Q 002356 285 PIKDD-EGKVLKFIGMQVEVSK 305 (931)
Q Consensus 285 pi~d~-~G~v~~~v~~~~DITe 305 (931)
+++|. .+++.++++..+-++.
T Consensus 260 ~~~np~s~~~e~II~~h~v~~~ 281 (317)
T 4dj3_A 260 SFVNPWSRKVSFIIGRHKVRTS 281 (317)
T ss_dssp EEECSSSCCEEEEEEEEEECCC
T ss_pred EEECCCCCcccEEEEEEEeccC
Confidence 99987 4667777877775544
No 380
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.61 E-value=1.6e-07 Score=103.36 Aligned_cols=133 Identities=19% Similarity=0.255 Sum_probs=101.8
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCC----CCccceeEEEEeCCeEE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH----PFVPALYASFQTKTHVC 745 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~h----pnIv~l~~~~~~~~~~~ 745 (931)
.+..++.++.|..+.||++ +..+++|+.... .....+.+|..+|+.|.+ ..+++++.+ +..|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~-----~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~ 103 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKRD-----SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRF 103 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESSH-----HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSC
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCcH-----HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcE
Confidence 4556778899999999998 556889976432 234568899999998865 234566654 5668
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC----------------------------------
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG---------------------------------- 791 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g---------------------------------- 791 (931)
+||||++|.+|...... .++......++.+++..|..||+..
T Consensus 104 lvme~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (320)
T 3r70_A 104 NIMKYIKGERITYEQYH----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQ 179 (320)
T ss_dssp EEEECCCCBCCCHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEeecCCccccccccc----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcc
Confidence 99999999998744322 2677778888889999998888542
Q ss_pred -----------------------------CccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 792 -----------------------------IIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 792 -----------------------------IiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
++|+|++|.|||++.++.+.|+||+.+..
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 180 LLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred cccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 28999999999999865679999999854
No 381
>3gdi_A Period circadian protein homolog 2; tandem PAS domains, biological rhythms, cytoplasm, nucleus, phosphoprotein, transcription; 2.40A {Mus musculus}
Probab=98.56 E-value=2.4e-07 Score=100.78 Aligned_cols=98 Identities=12% Similarity=0.116 Sum_probs=84.8
Q ss_pred CCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCc-EE-EEEEEEecCCcEEEEEEEeeee
Q 002356 209 KPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS-YC-GRLLNYKKDGTPFWNLLTIAPI 286 (931)
Q Consensus 209 ~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~-~~-~e~~~~~kdG~~~w~~~~~~pi 286 (931)
+.||+++|+|+++..++||.++|++|+++..++||++.....+.+.+.+..++. .. .++|.++|||..+|++...+++
T Consensus 172 ~~dG~~~yvd~~~~~lLGY~peELig~s~~~~iHpdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~vwvet~~~~~ 251 (309)
T 3gdi_A 172 TPNCLFQAVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQAGGQPFDYSPIRFRTRNGEYITLDTSWSSF 251 (309)
T ss_dssp CTTCBEEEECTTHHHHHSCCHHHHTTSBHHHHBCTTSHHHHHHHHHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred cCCCeEEEECcccccccCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCCceeeceEEEEEccCCCEEEEEEEEEEE
Confidence 448999999999999999999999999998899999988777778888875543 55 5899999999999999999999
Q ss_pred ecC-CCCEEEEEEEEecchhh
Q 002356 287 KDD-EGKVLKFIGMQVEVSKH 306 (931)
Q Consensus 287 ~d~-~G~v~~~v~~~~DITer 306 (931)
+|. .+++.+++++.+-++..
T Consensus 252 ~np~s~~~e~ii~~h~v~~gp 272 (309)
T 3gdi_A 252 INPWSRKISFIIGRHKVRVGP 272 (309)
T ss_dssp ECTTTCCEEEEEEEEEEEECC
T ss_pred ECCCCCcccEEEEEEEEccCC
Confidence 886 57788899988888763
No 382
>4dj2_A Period circadian protein homolog 1; PAS domains, circadian clock protein, protein binding; 2.75A {Mus musculus}
Probab=98.52 E-value=1.9e-07 Score=102.05 Aligned_cols=99 Identities=15% Similarity=0.145 Sum_probs=84.4
Q ss_pred CCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHc-CCcE-EEEEEEEecCCcEEEEEEEeee
Q 002356 208 TKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQN-GQSY-CGRLLNYKKDGTPFWNLLTIAP 285 (931)
Q Consensus 208 ~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~-g~~~-~~e~~~~~kdG~~~w~~~~~~p 285 (931)
.+.||+++|+|+++..++||.++|++|+++..++||++.....+.+...+.. |... ..++|.++|||..+|++.+.++
T Consensus 182 h~~dG~~~yvd~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~vwvet~~~~ 261 (320)
T 4dj2_A 182 HTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHSPIRFCARNGEYVTMDTSWAG 261 (320)
T ss_dssp ECTTCBEEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHTTSSSCCEECCCEEEECSSSCEEEEECEEEE
T ss_pred ecCCceEEEcCcceeccCCcChHHHcCCcHHHhCCHHHHHHHHHHHHHHHhcCCCcccceEEEEEccCCCEEEEEEEEEE
Confidence 3448999999999999999999999999999999999887777777777774 4445 3589999999999999999999
Q ss_pred eecC-CCCEEEEEEEEecchhh
Q 002356 286 IKDD-EGKVLKFIGMQVEVSKH 306 (931)
Q Consensus 286 i~d~-~G~v~~~v~~~~DITer 306 (931)
++|. .+++.++|+..+-|+..
T Consensus 262 ~~np~s~~~e~II~~h~v~~gp 283 (320)
T 4dj2_A 262 FVHPWSRKVAFVLGRHKVRTAP 283 (320)
T ss_dssp EECTTTCSEEEEEEEEEESSCC
T ss_pred EECCCCCCccEEEEEEEEccCC
Confidence 9986 57788899988888764
No 383
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.38 E-value=2e-06 Score=93.85 Aligned_cols=133 Identities=18% Similarity=0.144 Sum_probs=96.9
Q ss_pred cccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCC---CccceeEEEE-eCCeEEEEEe
Q 002356 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP---FVPALYASFQ-TKTHVCLITD 749 (931)
Q Consensus 674 ~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hp---nIv~l~~~~~-~~~~~~lVmE 749 (931)
+..++.|....||++ +..+++|+... ......+.+|..+|+.|.+. .|++++.+.. ..+..|+|||
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e 93 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPKS-----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR 93 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecCC-----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence 456788998999998 45688997432 23456788999999999642 3667777764 4566789999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---------------------------------------
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------------------------------------- 790 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~--------------------------------------- 790 (931)
+++|.+|....-. .++......++.++...|..||+.
T Consensus 94 ~i~G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 94 KVQGQILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CCCSEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred ccCCeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 9999888764221 145556666666666666666643
Q ss_pred ---------------------CCccCCCCCCcEEEec---CCc-EEEEeccCCcc
Q 002356 791 ---------------------GIIYRDLKPENVLLQG---NGH-VSLTDFDLSCL 820 (931)
Q Consensus 791 ---------------------gIiHrDIKP~NIll~~---~g~-vkL~DFG~a~~ 820 (931)
.++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 3489999999999987 455 47999998854
No 384
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.37 E-value=2.5e-06 Score=90.98 Aligned_cols=131 Identities=18% Similarity=0.208 Sum_probs=98.0
Q ss_pred cccCcE-EEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEEEEeCCeEEEEEeccCCCC
Q 002356 678 GSGDTG-SVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLITDYCPGGE 755 (931)
Q Consensus 678 G~G~~g-~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lVmE~~~ggs 755 (931)
..|..+ .||++.....+..+++|..... ....+.+|..+|+.|. +--|++++.++...+..|+|||+++|.+
T Consensus 33 ~~G~S~~~v~rl~~~~~~~~~~lk~~~~~------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 33 NVGQSGATIYRLYGKPNAPELFLKHGKGS------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp ECSSSSCEEEEEECCTTCCCEEEEEEETH------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred cCCCcCCeEEEEEecCCCeEEEEEECCCC------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 344444 7999988777788999986543 4566788999999884 3347888999999999999999999998
Q ss_pred HHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---------------------------------------------
Q 002356 756 LFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------------------------------------------- 790 (931)
Q Consensus 756 L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~--------------------------------------------- 790 (931)
+.+...... .....++.++...|..||..
T Consensus 107 ~~~~~~~~~------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 107 AFQVLEEYP------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHHHHCG------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred ccccccCCH------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 887664321 22344566666777777741
Q ss_pred -------------CCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 791 -------------GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 791 -------------gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
.++|+|+.|.|||++.++.+-|+||+.+..
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 168999999999999766667999998843
No 385
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.19 E-value=5e-06 Score=92.89 Aligned_cols=77 Identities=10% Similarity=0.172 Sum_probs=58.7
Q ss_pred ccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCC--CccceeEEEEeC-CeEEEE
Q 002356 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP--FVPALYASFQTK-THVCLI 747 (931)
Q Consensus 671 y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hp--nIv~l~~~~~~~-~~~~lV 747 (931)
...++.++.|....+|++.. .+..|++|..... ..+..|..+|+.|... .+++++.+.... +..|+|
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~--------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv 112 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA--------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCI 112 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE--TTEEEEEEEESCC--------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEE
T ss_pred CceEEECCCCCcceEEEEEE--CCcEEEEEeCCch--------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEE
Confidence 44567789999999999975 5789999987543 2477899999988643 356777776654 678999
Q ss_pred EeccCCCCHH
Q 002356 748 TDYCPGGELF 757 (931)
Q Consensus 748 mE~~~ggsL~ 757 (931)
|||++|.+|.
T Consensus 113 ~e~l~G~~l~ 122 (362)
T 3ovc_A 113 SRRAQGVTLQ 122 (362)
T ss_dssp EECCCSEETT
T ss_pred EEecCCCCcc
Confidence 9999886653
No 386
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.96 E-value=1.5e-05 Score=90.16 Aligned_cols=80 Identities=15% Similarity=0.140 Sum_probs=51.0
Q ss_pred ccccccccCcEEEEEEEEecCCeEEEEEEeecccc-cC---hHHHHHHHHHHHHHHhcCC--C-CccceeEEEEeCCeEE
Q 002356 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-LN---RNKVHRACAEREILDMLDH--P-FVPALYASFQTKTHVC 745 (931)
Q Consensus 673 i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~-~~---~~~~~~~~~E~~il~~l~h--p-nIv~l~~~~~~~~~~~ 745 (931)
..+.||.|.++.||++....+++.+++|....... .. .....++..|.++|+.+.. | .+++++.+ +....+
T Consensus 34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~ 111 (397)
T 2olc_A 34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAV 111 (397)
T ss_dssp EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTE
T ss_pred EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccE
Confidence 35678999999999997655678899998653211 00 1123456778899888732 3 45566643 344568
Q ss_pred EEEeccCCC
Q 002356 746 LITDYCPGG 754 (931)
Q Consensus 746 lVmE~~~gg 754 (931)
+|||+++|.
T Consensus 112 lvmE~l~g~ 120 (397)
T 2olc_A 112 TVMEDLSHL 120 (397)
T ss_dssp EEECCCTTS
T ss_pred EEEEeCCCc
Confidence 999999764
No 387
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.90 E-value=1.8e-05 Score=85.34 Aligned_cols=77 Identities=19% Similarity=0.102 Sum_probs=58.4
Q ss_pred cccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCC---CccceeEEEEeCCeEEEEE
Q 002356 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP---FVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 672 ~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hp---nIv~l~~~~~~~~~~~lVm 748 (931)
.-.+.|+.|.++.||++.. .+|+.+++|+..... ......+..|...|+.|.+. .+++++.+. ..|+||
T Consensus 18 ~~~~~l~gG~~n~vy~v~~-~dG~~~vvK~~~~~~---~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvm 89 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDA---PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp EEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTC---CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred cceeeeCCcchhheEEEEe-CCCCeEEEEecCCCC---cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEE
Confidence 4467799999999999976 467889999864321 11235678899999999764 578888763 368999
Q ss_pred eccCCCCH
Q 002356 749 DYCPGGEL 756 (931)
Q Consensus 749 E~~~ggsL 756 (931)
||++|+++
T Consensus 90 e~l~g~~~ 97 (288)
T 3d1u_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EecccCCC
Confidence 99998874
No 388
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.85 E-value=0.00012 Score=80.37 Aligned_cols=138 Identities=14% Similarity=0.131 Sum_probs=78.7
Q ss_pred cccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC--CCCccceeE------EEEeCCeEE
Q 002356 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD--HPFVPALYA------SFQTKTHVC 745 (931)
Q Consensus 674 ~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~--hpnIv~l~~------~~~~~~~~~ 745 (931)
+..|+.|..+.||++.. .+..|++|+.... . ..+..|..+++.|. .-.+++++. +....+..+
T Consensus 37 ~~~l~gG~~n~~~~v~~--~~~~~vlk~~~~~----~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~ 107 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHT--DSGAVCLKRIHRP----E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLF 107 (346)
T ss_dssp EEECC----CEEEEEEE--TTEEEEEEEECSC----H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEE
T ss_pred eeeccccccCcEEEEEe--CCCCEEEEecCCC----H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEE
Confidence 34566677889999976 3345999988652 1 22334555555442 113344432 123467789
Q ss_pred EEEeccCCCCHH-----------HH---Hhh--CCC--C-C------C-CHH--------H-------------------
Q 002356 746 LITDYCPGGELF-----------LL---LDR--QPT--K-V------L-KED--------A------------------- 772 (931)
Q Consensus 746 lVmE~~~ggsL~-----------~~---l~~--~~~--~-~------l-~~~--------~------------------- 772 (931)
++|+|++|.++. .. ++. ... . . + ... .
T Consensus 108 ~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 187 (346)
T 2q83_A 108 VVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQL 187 (346)
T ss_dssp EEEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHH
T ss_pred EEEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHH
Confidence 999999886542 11 111 100 0 0 0 000 0
Q ss_pred ----HHHHHHHHHHHHHHHHH-------------CCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 773 ----VRFYAAEVVVALEYLHC-------------QGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 773 ----~~~i~~qil~aL~~LH~-------------~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
+..+..++..++.+|+. .+++|+|++|.|||++.++.+.|+||+.+..
T Consensus 188 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 188 YLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 11122233445666652 5899999999999998788999999998843
No 389
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.83 E-value=4.3e-05 Score=84.93 Aligned_cols=85 Identities=12% Similarity=0.020 Sum_probs=56.2
Q ss_pred ccccc-cccCcEEEEEEEEe--c----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-C--CCccceeEEEEeC-
Q 002356 673 PIKPL-GSGDTGSVHLVELC--G----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-H--PFVPALYASFQTK- 741 (931)
Q Consensus 673 i~~~L-G~G~~g~Vy~~~~~--~----~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-h--pnIv~l~~~~~~~- 741 (931)
..+.| +.|..+.+|++... . ++..+++|...............+.+|..+|+.|. + -.+++++.+....
T Consensus 24 ~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~ 103 (357)
T 3ats_A 24 VESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD 103 (357)
T ss_dssp EEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred EEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence 34667 88889999998763 1 25689999865432000001134667888888873 2 3577888776654
Q ss_pred --CeEEEEEeccCCCCHH
Q 002356 742 --THVCLITDYCPGGELF 757 (931)
Q Consensus 742 --~~~~lVmE~~~ggsL~ 757 (931)
+..|+||||++|..+.
T Consensus 104 ~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 104 VLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TTSSCEEEEECCCCBCCC
T ss_pred ccCCceEEEEecCCCChh
Confidence 3568999999886653
No 390
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.53 E-value=0.00051 Score=74.76 Aligned_cols=76 Identities=20% Similarity=0.173 Sum_probs=60.6
Q ss_pred ccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC---CCCccceeEEEEeCCeEEEEEe
Q 002356 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 673 i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~~~~~lVmE 749 (931)
-.+.|+.|....+|++.. ++..|++|+.... ....+..|...|+.|. ...+++++.+....+..|+|||
T Consensus 40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme 111 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLE 111 (312)
T ss_dssp EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEE
T ss_pred eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEE
Confidence 356789999999999975 4678889987543 2456788999988883 3678899988888889999999
Q ss_pred ccCCCCH
Q 002356 750 YCPGGEL 756 (931)
Q Consensus 750 ~~~ggsL 756 (931)
|++|..+
T Consensus 112 ~l~G~~~ 118 (312)
T 3jr1_A 112 ALNKSKN 118 (312)
T ss_dssp CCCCCCC
T ss_pred eccCCCC
Confidence 9998764
No 391
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.34 E-value=0.00059 Score=77.59 Aligned_cols=77 Identities=23% Similarity=0.240 Sum_probs=46.0
Q ss_pred ccccccccCcEEEEEEEEecCCeEEEEEEeecccc-cChH---HHHHHHHHHHHHHhc---CCCCccceeEEEEeCCeEE
Q 002356 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-LNRN---KVHRACAEREILDML---DHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 673 i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~-~~~~---~~~~~~~E~~il~~l---~hpnIv~l~~~~~~~~~~~ 745 (931)
-++.||.|..+.||++.. +++.++||....... .... ...+...|.+++..+ ....+++++.+. ....+
T Consensus 38 ~i~~l~~G~~n~vyrv~~--~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~ 113 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG--SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMAL 113 (420)
T ss_dssp EEEECCCSSSCEEEEEEC--SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTE
T ss_pred EEEEccCCCcEEEEEEEc--CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccE
Confidence 356789999999999964 567899995432110 0000 001222233333322 345677887765 56678
Q ss_pred EEEecc-CC
Q 002356 746 LITDYC-PG 753 (931)
Q Consensus 746 lVmE~~-~g 753 (931)
+||||+ +|
T Consensus 114 lv~e~l~~g 122 (420)
T 2pyw_A 114 IGMRYLEPP 122 (420)
T ss_dssp EEECCCCTT
T ss_pred EEEeecCCc
Confidence 999999 77
No 392
>1oj5_A Steroid receptor coactivator 1A; transcriptional coactivator, complex, LXXLL motif, transcriptional regulation; 2.2A {Mus musculus} SCOP: d.110.3.8
Probab=97.22 E-value=0.00033 Score=64.67 Aligned_cols=97 Identities=8% Similarity=-0.000 Sum_probs=77.1
Q ss_pred CCCCCceEEcchHHHHHhCCCh--hhhcCCCCCCCCCCCCCh--HHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEe
Q 002356 208 TKPDYPIMYASAGFFKMTGYTS--KEVVGRNCRFLQGAGTDP--EDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTI 283 (931)
Q Consensus 208 ~~~dG~I~~~N~a~~~l~Gys~--eEllG~~~~~l~~~~~~~--~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~ 283 (931)
.+.||+|+++..+.. ..+|.. +||+|+.+..++++++.. ...+.+..++..|...+.-++.+.|+|..+|++...
T Consensus 13 h~~dGKf~~vDq~~~-r~~~~~g~qdLlGrsiy~f~H~~D~~~s~l~~h~~~vl~~Gq~~S~~YRfr~k~g~~V~~qT~s 91 (132)
T 1oj5_A 13 QDTTGKIISIDTSSL-RAAGRTGWEDLVRKCIYAFFQPQGREPSYARQLFQEVMTRGTASSPSYRFILNDGTMLSAHTRC 91 (132)
T ss_dssp ECTTCCEEEEECHHH-HTTCCSCHHHHHHHHHHHHTSCBTTBCCHHHHHHHHHHHHSEEECCCEEEECTTSCEEEEEEEE
T ss_pred ecCCCcEEEEecccc-cccccccHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHcCCccccceEEEecCCcEEEEEEEE
Confidence 444899999999987 478888 999999999899988855 788888889988888788899999999999999998
Q ss_pred eeeecCC-CCEEEEEEEEecchh
Q 002356 284 APIKDDE-GKVLKFIGMQVEVSK 305 (931)
Q Consensus 284 ~pi~d~~-G~v~~~v~~~~DITe 305 (931)
..+++.. .++-++|++-.=+.+
T Consensus 92 k~f~np~t~e~e~Ivs~n~v~r~ 114 (132)
T 1oj5_A 92 KLCYPQSPDMQPFIMGIHIIDRE 114 (132)
T ss_dssp EEECC----CCCEEEEEEEEECC
T ss_pred EEecCCCCCCCCEEEEEEEEEcC
Confidence 8888752 345566665544443
No 393
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.16 E-value=0.00039 Score=75.24 Aligned_cols=135 Identities=13% Similarity=0.043 Sum_probs=75.5
Q ss_pred ccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEEEEeCCeEEEEEecc
Q 002356 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLITDYC 751 (931)
Q Consensus 673 i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lVmE~~ 751 (931)
-++.|+.|....+|++ ..|++|+...... ......+|..+++.+. +.-.++++.+ ..+.-++++||+
T Consensus 22 ~i~~l~gG~tN~~~~~------~~~vlR~~~~~~~----~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i 89 (301)
T 3dxq_A 22 GPLERLGGLTNLVFRA------GDLCLRIPGKGTE----EYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYI 89 (301)
T ss_dssp SCEEEESCSSEEEEEE------TTEEEEEECC--------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECC
T ss_pred ceeEcCCcccccccee------eeEEEECCCCCcc----ceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeec
Confidence 3778899999999999 3588998765311 1112345777777773 2222566654 333347899999
Q ss_pred -CCCCHHHH---------------H---hhCCCC---CCC-HHHHHHHHHH--------------HHHHHHHH----HH-
Q 002356 752 -PGGELFLL---------------L---DRQPTK---VLK-EDAVRFYAAE--------------VVVALEYL----HC- 789 (931)
Q Consensus 752 -~ggsL~~~---------------l---~~~~~~---~l~-~~~~~~i~~q--------------il~aL~~L----H~- 789 (931)
+|.+|... + +..... .++ ...+..+... +...+..+ ..
T Consensus 90 ~~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 169 (301)
T 3dxq_A 90 AGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAH 169 (301)
T ss_dssp TTCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSS
T ss_pred CCCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhc
Confidence 66554310 1 111100 001 1111111111 11111111 11
Q ss_pred ---CCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 790 ---QGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 790 ---~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
..++|+|+.|.||+ ..++.+.|+||..+..
T Consensus 170 ~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 170 PLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 24899999999999 5677899999998853
No 394
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.94 E-value=0.00099 Score=74.45 Aligned_cols=138 Identities=18% Similarity=0.239 Sum_probs=83.0
Q ss_pred ccccccCcEEEEEEEEec-------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEEEEeCCeEEE
Q 002356 675 KPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~-------~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~l 746 (931)
+.|..|-...+|++.... +++.|++|+.... ......+.+|..+++.|. +.-.++++..+.+ .+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~----~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~ 127 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI----LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GR 127 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc----cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----cc
Confidence 456677778899998742 3578999986331 123455668999998883 4344677766543 29
Q ss_pred EEeccCCCCHHH--------------HHh---hCC---CCCCC--HHHHHHHHHHHHH-------------------HHH
Q 002356 747 ITDYCPGGELFL--------------LLD---RQP---TKVLK--EDAVRFYAAEVVV-------------------ALE 785 (931)
Q Consensus 747 VmE~~~ggsL~~--------------~l~---~~~---~~~l~--~~~~~~i~~qil~-------------------aL~ 785 (931)
||||++|.+|.. .|. ... .+... ...+..+..++.. .+.
T Consensus 128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (379)
T 3feg_A 128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG 207 (379)
T ss_dssp EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence 999998855431 111 110 11111 3455555544422 233
Q ss_pred HHH----H----CCCccCCCCCCcEEEecC----CcEEEEeccCCcc
Q 002356 786 YLH----C----QGIIYRDLKPENVLLQGN----GHVSLTDFDLSCL 820 (931)
Q Consensus 786 ~LH----~----~gIiHrDIKP~NIll~~~----g~vkL~DFG~a~~ 820 (931)
.|. . ..++|+|+.+.|||++.+ +.+.|+||..+..
T Consensus 208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 332 2 258999999999999876 6899999999853
No 395
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.93 E-value=0.0017 Score=71.09 Aligned_cols=137 Identities=14% Similarity=0.176 Sum_probs=71.9
Q ss_pred ccccccCcEE-EEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-C-CCccceeEEEEeCCeEEEEEecc
Q 002356 675 KPLGSGDTGS-VHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-H-PFVPALYASFQTKTHVCLITDYC 751 (931)
Q Consensus 675 ~~LG~G~~g~-Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-h-pnIv~l~~~~~~~~~~~lVmE~~ 751 (931)
+.|+.|+... +|++.. .++..|++|....... ..+..|..+++.|. + -.+++++.+....+ +++||++
T Consensus 24 ~~l~gg~s~~~~~r~~~-~~~~~~vlk~~~~~~~------~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l 94 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRS-PTGAKAVLMDWSPEEG------GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDL 94 (333)
T ss_dssp CC--------CCEEEEC-TTCCEEEEEECCTTTT------CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCC
T ss_pred eECCCCCCCceEEEEEc-CCCCeEEEEECCCCCC------ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeC
Confidence 4465565554 667753 2356778886543210 22345667766663 2 34667776533333 7899999
Q ss_pred CCCCHHHHHhhCC------------------------CCCCCHHHHH-------H-HH------------HHHHHHHHHH
Q 002356 752 PGGELFLLLDRQP------------------------TKVLKEDAVR-------F-YA------------AEVVVALEYL 787 (931)
Q Consensus 752 ~ggsL~~~l~~~~------------------------~~~l~~~~~~-------~-i~------------~qil~aL~~L 787 (931)
.+..+.+.+.... ...++..... . +. ..+...+..+
T Consensus 95 ~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l 174 (333)
T 3csv_A 95 GDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQI 174 (333)
T ss_dssp CSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred CCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 7766654432210 0112221110 0 00 0111222333
Q ss_pred ------HHCCCccCCCCCCcEEEecC----CcEEEEeccCCcc
Q 002356 788 ------HCQGIIYRDLKPENVLLQGN----GHVSLTDFDLSCL 820 (931)
Q Consensus 788 ------H~~gIiHrDIKP~NIll~~~----g~vkL~DFG~a~~ 820 (931)
+...++|+|+.|.|||++.+ +.+.|+||+.+..
T Consensus 175 ~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 175 LSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred HHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 12479999999999999874 6799999999854
No 396
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.92 E-value=0.0023 Score=69.63 Aligned_cols=142 Identities=19% Similarity=0.230 Sum_probs=78.7
Q ss_pred cccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-C-CCccceeEE------EEeCCe
Q 002356 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-H-PFVPALYAS------FQTKTH 743 (931)
Q Consensus 672 ~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-h-pnIv~l~~~------~~~~~~ 743 (931)
.-++.|+.|....+|++... ++ .|++|+..... ....+..|..+++.|. + -.+++++.. ....+.
T Consensus 25 ~~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~~-----~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~ 97 (322)
T 2ppq_A 25 TSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKRV-----EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGR 97 (322)
T ss_dssp EEEEEECC---EEEEEEEES-SC-CEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTE
T ss_pred eEeeccCCCcccceEEEEeC-Cc-cEEEEEeCCCC-----CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCE
Confidence 34566788888999999763 33 68899886521 1223455777776663 1 113333321 223466
Q ss_pred EEEEEeccCCCCHHH-----------H---HhhC--C--CC---CCCHHHHHH---------------HHHHHHHHHHHH
Q 002356 744 VCLITDYCPGGELFL-----------L---LDRQ--P--TK---VLKEDAVRF---------------YAAEVVVALEYL 787 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~-----------~---l~~~--~--~~---~l~~~~~~~---------------i~~qil~aL~~L 787 (931)
.+++|+|++|..+.. . ++.. . .. ......... +...+...+.++
T Consensus 98 ~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l 177 (322)
T 2ppq_A 98 PAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYL 177 (322)
T ss_dssp EEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHH
T ss_pred EEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Confidence 799999998865311 1 1110 0 00 011110000 001133455555
Q ss_pred HH-------CCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 788 HC-------QGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 788 H~-------~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
+. .+++|+|+.|.|||++.++.+.|+||+.+..
T Consensus 178 ~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 178 AAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp HHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 53 3799999999999999765568999998853
No 397
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.81 E-value=0.0022 Score=73.01 Aligned_cols=74 Identities=20% Similarity=0.306 Sum_probs=49.8
Q ss_pred cccccccCcEEEEEEEEec-------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEEEEeCCeEE
Q 002356 674 IKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVC 745 (931)
Q Consensus 674 ~~~LG~G~~g~Vy~~~~~~-------~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~ 745 (931)
++.|+.|-...+|++.... .+..|++|+.... .. ...+.+|..+++.|. +...+++++.+.+ .
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g 148 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ET---ESHLVAESVIFTLLSERHLGPKLYGIFSG----G 148 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--Cc---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----C
Confidence 4568888889999998753 2578999987431 11 134457888888884 3334677766542 3
Q ss_pred EEEeccCCCCH
Q 002356 746 LITDYCPGGEL 756 (931)
Q Consensus 746 lVmE~~~ggsL 756 (931)
+||||++|.+|
T Consensus 149 ~v~e~l~G~~l 159 (429)
T 1nw1_A 149 RLEEYIPSRPL 159 (429)
T ss_dssp EEECCCCEEEC
T ss_pred EEEEEeCCccc
Confidence 89999987443
No 398
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.76 E-value=0.0028 Score=67.86 Aligned_cols=81 Identities=19% Similarity=0.103 Sum_probs=56.7
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-C--CCccceeEEEEeCCeE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-H--PFVPALYASFQTKTHV 744 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-h--pnIv~l~~~~~~~~~~ 744 (931)
.....-++.+|.|..+.||++.. .+|+.|++|+..... ......+..|...|+.|. . --+++++.+ .. .
T Consensus 14 G~~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~---~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~--~ 85 (288)
T 3f7w_A 14 GREVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDA---PALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD--R 85 (288)
T ss_dssp CCCEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTC---CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET--T
T ss_pred CCCeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCC---cchhhHHHHHHHHHHHHHhhCCCCcceEEec--cC--c
Confidence 44566678899999999999986 568899999865432 122245678999999884 2 245566654 22 3
Q ss_pred EEEEeccCCCCH
Q 002356 745 CLITDYCPGGEL 756 (931)
Q Consensus 745 ~lVmE~~~ggsL 756 (931)
++||||+.++..
T Consensus 86 ~lv~e~l~~~~~ 97 (288)
T 3f7w_A 86 TLAMEWVDERPP 97 (288)
T ss_dssp EEEEECCCCCCC
T ss_pred eEEEEeecccCC
Confidence 789999987643
No 399
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.59 E-value=0.0025 Score=70.93 Aligned_cols=75 Identities=21% Similarity=0.250 Sum_probs=44.9
Q ss_pred cccccccCcEEEEEEEEec--------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEEEEeCCeE
Q 002356 674 IKPLGSGDTGSVHLVELCG--------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHV 744 (931)
Q Consensus 674 ~~~LG~G~~g~Vy~~~~~~--------~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~ 744 (931)
+..|+.|....+|++.... .+..|++|+...... .......|..+++.|. +..+++++..+ .+
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~----~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~-- 109 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD----ELYNTISEFEVYKTMSKYKIAPQLLNTF--NG-- 109 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG----GTSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc----ceecHHHHHHHHHHHHhcCCCCceEEec--CC--
Confidence 4567788888999998743 136889998754311 1112356888888774 32255777554 22
Q ss_pred EEEEeccCCCCH
Q 002356 745 CLITDYCPGGEL 756 (931)
Q Consensus 745 ~lVmE~~~ggsL 756 (931)
++||||++|.++
T Consensus 110 ~~v~e~i~G~~l 121 (369)
T 3c5i_A 110 GRIEEWLYGDPL 121 (369)
T ss_dssp EEEEECCCSEEC
T ss_pred cEEEEEecCCcC
Confidence 689999987543
No 400
>1oj5_A Steroid receptor coactivator 1A; transcriptional coactivator, complex, LXXLL motif, transcriptional regulation; 2.2A {Mus musculus} SCOP: d.110.3.8
Probab=96.58 E-value=0.0019 Score=59.62 Aligned_cols=103 Identities=13% Similarity=0.089 Sum_probs=79.8
Q ss_pred cceEEEEcCCCCCCCEEecCHHHHHHcCCCh--hhhcCCCCCCCCCCCCCH--HHHHHHHHHHHcCCcEEEEEEEEecCC
Q 002356 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSR--EEILGRNCRFLQGPETDP--ATVRKIRAAIDNQTDVTVQLINYTKSG 557 (931)
Q Consensus 482 ~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~--eEllG~~~~~l~~~~~~~--~~~~~l~~~l~~~~~~~~e~~~~~kdG 557 (931)
..-+.-.|.+|+ |++|.....+ .+|.. +||+|+.+.+++|++|.. .+.+....++..|.....-++++.++|
T Consensus 7 e~F~sRh~~dGK---f~~vDq~~~r-~~~~~g~qdLlGrsiy~f~H~~D~~~s~l~~h~~~vl~~Gq~~S~~YRfr~k~g 82 (132)
T 1oj5_A 7 ESFMTKQDTTGK---IISIDTSSLR-AAGRTGWEDLVRKCIYAFFQPQGREPSYARQLFQEVMTRGTASSPSYRFILNDG 82 (132)
T ss_dssp CEEEEEECTTCC---EEEEECHHHH-TTCCSCHHHHHHHHHHHHTSCBTTBCCHHHHHHHHHHHHSEEECCCEEEECTTS
T ss_pred eeeEEeecCCCc---EEEEeccccc-ccccccHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHcCCccccceEEEecCC
Confidence 445666788888 9999998874 77777 999999999999999965 777888888887777777899999999
Q ss_pred cEEEEEEEEEeeecCC-CCEEEEEEEEecCCc
Q 002356 558 KKFWNLFHLQPMRDQK-GEVQYFIGVQLDGSE 588 (931)
Q Consensus 558 ~~~wv~~~~~pi~d~~-G~~~~~vgi~rDITe 588 (931)
..+|+......+++.. .++.+++++-.=|.+
T Consensus 83 ~~V~~qT~sk~f~np~t~e~e~Ivs~n~v~r~ 114 (132)
T 1oj5_A 83 TMLSAHTRCKLCYPQSPDMQPFIMGIHIIDRE 114 (132)
T ss_dssp CEEEEEEEEEEECC----CCCEEEEEEEEECC
T ss_pred cEEEEEEEEEEecCCCCCCCCEEEEEEEEEcC
Confidence 9999999888887752 344555655433333
No 401
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.58 E-value=0.0084 Score=65.25 Aligned_cols=138 Identities=13% Similarity=0.053 Sum_probs=78.0
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCC--CCccceeEE-----EEeCCeEEEE
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYAS-----FQTKTHVCLI 747 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~h--pnIv~l~~~-----~~~~~~~~lV 747 (931)
..|+ |....||++.. .+|+.|++|....... ....+..|..+++.|.. -.+++++.. ....+..+++
T Consensus 32 ~~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~~----~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l 105 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQD-EDRRRFVVKFYRPERW----TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAV 105 (328)
T ss_dssp EEEC-CSSSEEEEECC-TTCCCEEEEEECTTTS----CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEE
T ss_pred Eeec-CcccceEEEEc-CCCCEEEEEEcCCCCC----CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEE
Confidence 4566 77789998865 3466799999864311 22445667777777631 124444432 2235677899
Q ss_pred EeccCCCCHH-----H------H---Hhh--C--CC---CCCCHHHH----------------------HHHHHHHHHHH
Q 002356 748 TDYCPGGELF-----L------L---LDR--Q--PT---KVLKEDAV----------------------RFYAAEVVVAL 784 (931)
Q Consensus 748 mE~~~ggsL~-----~------~---l~~--~--~~---~~l~~~~~----------------------~~i~~qil~aL 784 (931)
|++++|..+. . . ++. . .. ..++.... ...+.+++..+
T Consensus 106 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 185 (328)
T 1zyl_A 106 FPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAV 185 (328)
T ss_dssp EECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHH
Confidence 9999875431 1 1 111 0 00 01121110 11111222222
Q ss_pred HHH----HHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 785 EYL----HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 785 ~~L----H~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
.-+ +...++|+|++|.|||++ + .+.|+||+.+..
T Consensus 186 ~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 186 TAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 211 124689999999999998 4 899999998754
No 402
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.53 E-value=0.0094 Score=65.51 Aligned_cols=31 Identities=23% Similarity=0.338 Sum_probs=27.5
Q ss_pred CCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 790 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 790 ~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
.+++|+|+.|.||+++.++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 3699999999999999888899999998754
No 403
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.40 E-value=0.011 Score=67.87 Aligned_cols=75 Identities=15% Similarity=0.144 Sum_probs=48.5
Q ss_pred cccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCC-ccceeEEEEeCCeEEEEEeccC
Q 002356 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF-VPALYASFQTKTHVCLITDYCP 752 (931)
Q Consensus 674 ~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpn-Iv~l~~~~~~~~~~~lVmE~~~ 752 (931)
++.|+.|-...+|++.....+..|++|+...... .. -...+|..+++.|...+ .++++..+. + .+||||++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~---~~-idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~ 184 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD---EI-INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMD 184 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC---SC-SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh---hh-cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeC
Confidence 4567888889999998754457899998754311 11 11257899999885443 467777663 2 25999998
Q ss_pred CCCH
Q 002356 753 GGEL 756 (931)
Q Consensus 753 ggsL 756 (931)
|.+|
T Consensus 185 G~~l 188 (458)
T 2qg7_A 185 GYAL 188 (458)
T ss_dssp SEEC
T ss_pred CccC
Confidence 7444
No 404
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.04 E-value=0.015 Score=65.22 Aligned_cols=143 Identities=19% Similarity=0.262 Sum_probs=83.6
Q ss_pred cccccccCcEEEEEEEEec-------CCeEEEEEEeeccccc-----------ChH----HHHHHHHHHHHHHhcC-CCC
Q 002356 674 IKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVML-----------NRN----KVHRACAEREILDMLD-HPF 730 (931)
Q Consensus 674 ~~~LG~G~~g~Vy~~~~~~-------~~~~~AvK~~~~~~~~-----------~~~----~~~~~~~E~~il~~l~-hpn 730 (931)
++.|..|-...+|++.... ....|.+++.-..... ++. .......|..+++.|. +.-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 4456667888999998743 1468999987543210 000 0112335888888883 555
Q ss_pred ccceeEEEEeCCeEEEEEeccCCCCHHH--------------HHh---hCC---CCCCC--HHHHHHHHHHHH-------
Q 002356 731 VPALYASFQTKTHVCLITDYCPGGELFL--------------LLD---RQP---TKVLK--EDAVRFYAAEVV------- 781 (931)
Q Consensus 731 Iv~l~~~~~~~~~~~lVmE~~~ggsL~~--------------~l~---~~~---~~~l~--~~~~~~i~~qil------- 781 (931)
.+++++++..+ +|+||++|.+|.. .+. ... .+... ...+..+..++.
T Consensus 137 ~Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 67888776532 8999998754421 111 110 11111 223444443322
Q ss_pred ---------------HHHH----HHHHC----CCccCCCCCCcEEEecC------CcEEEEeccCCcc
Q 002356 782 ---------------VALE----YLHCQ----GIIYRDLKPENVLLQGN------GHVSLTDFDLSCL 820 (931)
Q Consensus 782 ---------------~aL~----~LH~~----gIiHrDIKP~NIll~~~------g~vkL~DFG~a~~ 820 (931)
.-+. +|... .++|+|+.+.|||++.+ +.+.|+||..|..
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1122 23222 58999999999999876 7899999998853
No 405
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.20 E-value=0.019 Score=65.05 Aligned_cols=75 Identities=21% Similarity=0.321 Sum_probs=48.6
Q ss_pred cccccccCcEEEEEEEEecC-------CeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEEEEeCCeEE
Q 002356 674 IKPLGSGDTGSVHLVELCGS-------GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVC 745 (931)
Q Consensus 674 ~~~LG~G~~g~Vy~~~~~~~-------~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~ 745 (931)
++.|..|-...+|++..... +..|++|+..... ...-...+|..+++.|. +.-.+++++.+. + +
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t----~~~idR~~E~~~l~~L~~~gi~P~l~~~~~--~--~ 146 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV----GKFYDSKVELDVFRYLSNINIAPNIIADFP--E--G 146 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-----CCCCHHHHHHHHHHHHHTTSSCCEEEEET--T--E
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc----chhcCHHHHHHHHHHHHhcCCCCCEEEEcC--C--C
Confidence 45567788889999987521 5789999865431 11112356888888773 334567775432 2 6
Q ss_pred EEEeccCCCCH
Q 002356 746 LITDYCPGGEL 756 (931)
Q Consensus 746 lVmE~~~ggsL 756 (931)
+||||++|..|
T Consensus 147 ~I~efI~G~~l 157 (424)
T 3mes_A 147 RIEEFIDGEPL 157 (424)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEeCCccC
Confidence 89999998653
No 406
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.10 E-value=0.067 Score=54.10 Aligned_cols=116 Identities=15% Similarity=0.122 Sum_probs=73.0
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcc
Q 002356 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (931)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 832 (931)
-||.++|... +.+++++++|.++.|.+.+|.-+-. +.-..+=+.|..|+|..+|.|.+.+ +.+.
T Consensus 33 vSL~eIL~~~-~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 33 LSLEEILRLY-NQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred ccHHHHHHHc-CCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc-------------
Confidence 4899999875 3679999999999999999877622 2212333456899999999987764 2210
Q ss_pred hhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHH-cCCCCCC----CCCHHHHH
Q 002356 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFR----GKTRQKTF 907 (931)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell-~G~~Pf~----~~~~~~~~ 907 (931)
.....|.|||... ...+.+.=|||||++||..+ +|-++=. ......++
T Consensus 98 --------------------------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~eE~eLS~~LE~LL 150 (229)
T 2yle_A 98 --------------------------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENEERELSPPLEQLI 150 (229)
T ss_dssp -----------------------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTEEECCCHHHHHHH
T ss_pred --------------------------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcccchhhCHHHHHHH
Confidence 0122456777653 23456788999999999998 4544432 23334555
Q ss_pred HHHH
Q 002356 908 ANIL 911 (931)
Q Consensus 908 ~~I~ 911 (931)
..|.
T Consensus 151 ~~Mt 154 (229)
T 2yle_A 151 DHMA 154 (229)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 5554
No 407
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.26 E-value=0.17 Score=56.67 Aligned_cols=29 Identities=28% Similarity=0.401 Sum_probs=24.9
Q ss_pred CccCCCCCCcEEEe------cCCcEEEEeccCCcc
Q 002356 792 IIYRDLKPENVLLQ------GNGHVSLTDFDLSCL 820 (931)
Q Consensus 792 IiHrDIKP~NIll~------~~g~vkL~DFG~a~~ 820 (931)
++|+|+.+.|||+. .++.+.++||.+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 68999999999994 456799999999854
No 408
>2ool_A Sensor protein; bacteriophytochrome, photoconversion, photoreceptor, biliver signaling protein; HET: LBV; 2.20A {Rhodopseudomonas palustris} SCOP: d.110.2.1 d.110.3.9
Probab=83.74 E-value=1.4 Score=47.79 Aligned_cols=77 Identities=17% Similarity=0.175 Sum_probs=48.2
Q ss_pred CcEE-EEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCc---EEEEEEEEec-CC
Q 002356 200 QTFV-VSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS---YCGRLLNYKK-DG 274 (931)
Q Consensus 200 ~~i~-v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~---~~~e~~~~~k-dG 274 (931)
.|+. ++|. .+++|+.+|..+++++|+++++++|+++..+++++ ....+...+..+.. ....+..... +|
T Consensus 42 ~G~Ll~~~~--~~~~i~~~S~N~~~~lg~~~~~llG~~l~~ll~~~----~~~~l~~~l~~~~~~~~~p~~~~~~~~~~~ 115 (337)
T 2ool_A 42 HGYLFVVSE--TDLRIASVSANVEDLLRQPPASLLNVPIAHYLTAA----SAARLTHALHGGDPAAINPIRLDVVTPDGE 115 (337)
T ss_dssp TSEEEEECT--TTCBEEEEETTHHHHHSSCGGGGTTCBGGGGBCHH----HHHHHHHHHCC----CCCSEEEEEEETTEE
T ss_pred CEEEEEEEC--CCCEEEEEehhHHHHHCcCHHHHcCCCHHHHcCHH----HHHHHHHHHhcCCccccCcEEEEEeccCCC
Confidence 3444 4553 36889999999999999999999999988777653 33445555544321 1123333333 35
Q ss_pred cEEEEEEE
Q 002356 275 TPFWNLLT 282 (931)
Q Consensus 275 ~~~w~~~~ 282 (931)
..+|+.+.
T Consensus 116 ~~f~~~~H 123 (337)
T 2ool_A 116 RAFNGILH 123 (337)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 56665543
No 409
>2ool_A Sensor protein; bacteriophytochrome, photoconversion, photoreceptor, biliver signaling protein; HET: LBV; 2.20A {Rhodopseudomonas palustris} SCOP: d.110.2.1 d.110.3.9
Probab=82.53 E-value=0.73 Score=50.02 Aligned_cols=78 Identities=13% Similarity=0.144 Sum_probs=49.7
Q ss_pred ceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCc---EEEEEEEEec-CCc
Q 002356 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD---VTVQLINYTK-SGK 558 (931)
Q Consensus 483 d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~---~~~e~~~~~k-dG~ 558 (931)
..++++|.+ +++|+.+|..+++++|+++++++|++...+++++. ...+...+..+.. ...+++.... +|.
T Consensus 43 G~Ll~~~~~--~~~i~~~S~N~~~~lg~~~~~llG~~l~~ll~~~~----~~~l~~~l~~~~~~~~~p~~~~~~~~~~~~ 116 (337)
T 2ool_A 43 GYLFVVSET--DLRIASVSANVEDLLRQPPASLLNVPIAHYLTAAS----AARLTHALHGGDPAAINPIRLDVVTPDGER 116 (337)
T ss_dssp SEEEEECTT--TCBEEEEETTHHHHHSSCGGGGTTCBGGGGBCHHH----HHHHHHHHCC----CCCSEEEEEEETTEEE
T ss_pred EEEEEEECC--CCEEEEEehhHHHHHCcCHHHHcCCCHHHHcCHHH----HHHHHHHHhcCCccccCcEEEEEeccCCCe
Confidence 344556654 35599999999999999999999999888887643 3344444433221 2234444333 356
Q ss_pred EEEEEEEE
Q 002356 559 KFWNLFHL 566 (931)
Q Consensus 559 ~~wv~~~~ 566 (931)
.+|+.++.
T Consensus 117 ~f~~~~Hr 124 (337)
T 2ool_A 117 AFNGILHR 124 (337)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 66665553
No 410
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=81.30 E-value=2.4 Score=42.66 Aligned_cols=83 Identities=10% Similarity=0.054 Sum_probs=61.0
Q ss_pred CCCCccceeEEEEeCCeEEEEEeccCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEe
Q 002356 727 DHPFVPALYASFQTKTHVCLITDYCPGG-ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ 805 (931)
Q Consensus 727 ~hpnIv~l~~~~~~~~~~~lVmE~~~gg-sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~ 805 (931)
.||+++.. .+-...+.+.+.++.-..+ ++.. +.. ++....+.++..|+....+++. =+|--|.|+||+++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik~-----~~~~eKlr~l~ni~~l~~~~~~--r~tf~L~P~NL~f~ 113 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IKS-----FTKNEKLRYLLNIKNLEEVNRT--RYTFVLAPDELFFT 113 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GGG-----SCHHHHHHHHHHGGGGGGGGGS--SEECCCSGGGEEEC
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HHh-----cCHHHHHHHHHHHHHHHHHhcC--ceEEEEecceEEEc
Confidence 68888877 5666777777766654322 3322 332 7788888999999887754443 36778999999999
Q ss_pred cCCcEEEEeccCC
Q 002356 806 GNGHVSLTDFDLS 818 (931)
Q Consensus 806 ~~g~vkL~DFG~a 818 (931)
.++.+++.-.|+.
T Consensus 114 ~~~~p~i~~RGik 126 (215)
T 4ann_A 114 RDGLPIAKTRGLQ 126 (215)
T ss_dssp TTSCEEESCCEET
T ss_pred CCCCEEEEEccCc
Confidence 9999999988875
No 411
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=79.59 E-value=2.2 Score=43.03 Aligned_cols=83 Identities=10% Similarity=-0.010 Sum_probs=60.5
Q ss_pred CCCCccceeEEEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHH-HHHHCCCccCCCCCCcEEEe
Q 002356 727 DHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALE-YLHCQGIIYRDLKPENVLLQ 805 (931)
Q Consensus 727 ~hpnIv~l~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~-~LH~~gIiHrDIKP~NIll~ 805 (931)
.||++ -..+-..++.+.+.++.-+++.=+..+.. ++....+.++.+|+.... ++ ..-+|--|.|+||+++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~-----~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~NL~f~ 118 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK-----TTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPENLMFN 118 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT-----SCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGGEEEC
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh-----cCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCceEEEe
Confidence 68888 44455677887777776544433344433 778888888888877655 34 3457788999999999
Q ss_pred cCCcEEEEeccCC
Q 002356 806 GNGHVSLTDFDLS 818 (931)
Q Consensus 806 ~~g~vkL~DFG~a 818 (931)
.++.+++.-.|+-
T Consensus 119 ~~~~p~i~hRGi~ 131 (219)
T 4ano_A 119 RALEPFFLHVGVK 131 (219)
T ss_dssp TTCCEEESCCEET
T ss_pred CCCcEEEEEcCCc
Confidence 9999999998875
No 412
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=74.51 E-value=22 Score=32.22 Aligned_cols=89 Identities=19% Similarity=0.278 Sum_probs=50.8
Q ss_pred HHHHHHHHHhcC-CcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEE
Q 002356 188 SDIVKDALSTFQ-QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGR 266 (931)
Q Consensus 188 ~~~~~~ile~~~-~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e 266 (931)
+..++.+-+... +.++++|. +|..++... .+.+|+++.. .+ .+..++. |..+...
T Consensus 38 ~~~~~~~~~~~~~~~i~v~d~---~G~~~a~~~----------~~~iG~~~~~--~~--------~~~~al~-G~~~~~~ 93 (131)
T 1p0z_A 38 KALIDPMRSFSDATYITVGDA---SGQRLYHVN----------PDEIGKSMEG--GD--------SDEALIN-AKSYVSV 93 (131)
T ss_dssp HHHHHHHHHHSCCSEEEEEET---TSBEEECSS----------GGGTTSBCCS--SC--------CHHHHHH-CCCEEEE
T ss_pred HHHHHHHHHhcCCCEEEEEcC---CCcEEEecC----------hhhCCCcccC--CC--------cHHHHhC-CCeEEEE
Confidence 344454444433 47888888 776776543 3458876421 11 1233444 4444432
Q ss_pred EEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchh
Q 002356 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (931)
Q Consensus 267 ~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITe 305 (931)
. .|...+.-....||++++|+++|++.+..++..
T Consensus 94 ~-----~g~~g~~~~~~~PV~~~~g~viGvv~vg~~l~~ 127 (131)
T 1p0z_A 94 R-----KGSLGSSLRGKSPIQDATGKVIGIVSVGYTIEQ 127 (131)
T ss_dssp E-----EETTEEEEEEEEEEECTTCCEEEEEEEEEEGGG
T ss_pred E-----EccceeeEEEEEeEECCCCCEEEEEEEEEEhHH
Confidence 2 222222333445999888999999999888764
No 413
>4dah_A Sporulation kinase D; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology, PAS-like fold; 2.03A {Bacillus subtilis} PDB: 4dbj_A 4dbi_A 4dak_A 3fos_A
Probab=74.43 E-value=14 Score=36.61 Aligned_cols=98 Identities=8% Similarity=0.123 Sum_probs=60.4
Q ss_pred chHHHHHHHHHhcCC--cEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcE
Q 002356 186 RVSDIVKDALSTFQQ--TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (931)
Q Consensus 186 ~~~~~~~~ile~~~~--~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~ 263 (931)
.....|..+.+..+. .++++|. +|+++..+. ....|.+ .. ....+..++..+..+
T Consensus 55 ~~~~~L~~~~~~~~~~~~i~i~d~---~G~~~~~~~----------~~~~~~~------~~----~r~~f~~a~~~~~~~ 111 (217)
T 4dah_A 55 KMQSILEKTFDSEPRFSGLYFLNA---KGDVTASTT----------ELKTKVN------LA----DRSFFIKAKETKKTV 111 (217)
T ss_dssp HHHHHHHHHHTTCTTEEEEEEEET---TCBEEEESS----------CCSSCCB------CT----TSHHHHHHHHHCSCE
T ss_pred HHHHHHHHHHhcCCcccEEEEECC---CCcEEEecC----------CCCCCCC------cc----hhHHHHHHHhcCCcE
Confidence 344566666665544 6788887 777887543 0001111 11 123455666666665
Q ss_pred EEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhH
Q 002356 264 CGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308 (931)
Q Consensus 264 ~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~ 308 (931)
-.+...-...|. |+-....||++.+|++.|+++...++....+
T Consensus 112 is~~~~~~~~g~--~~i~ia~pi~~~~g~~~Gvl~~~i~l~~l~~ 154 (217)
T 4dah_A 112 ISDSYSSRITGQ--PIFTICVPVLDSKRNVTDYLVAAIQIDYLKN 154 (217)
T ss_dssp ECCCEECTTTCS--EEEEEEEEEECTTSCEEEEEEEEEEHHHHHH
T ss_pred EeceEEcCCCCC--EEEEEEEEEECCCCCEEEEEEEEEcHHHHHH
Confidence 444433345566 5566678999989999999999888876543
No 414
>4ew7_A Conjugative transfer: regulation; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology; 1.67A {Salmonella enterica subsp}
Probab=65.74 E-value=22 Score=30.66 Aligned_cols=91 Identities=11% Similarity=0.150 Sum_probs=52.3
Q ss_pred HHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002356 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (931)
Q Consensus 474 l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (931)
.+.+..++|..+++-+.... |+|.|.+|.+||--+..-+-|.... ...-+..-...+.-...+..|. .-.+..
T Consensus 22 iq~iY~nSPVpVCVRNq~Rk---ilYaN~aF~elF~Ked~~~sg~S~~-~~~vE~~LS~LELeCqsLGhG~---af~r~F 94 (127)
T 4ew7_A 22 IQDIYKNSPVPVCVRNQSRK---IIYANGAFIELFSKEDQPLSGDSYN-RYGVEVFLSSLELECQSLGHGA---AFCRRF 94 (127)
T ss_dssp HHHHHTTCSSCEEEECTTSC---EEEECHHHHHHTTSCCCGGGCTTSS-HHHHHHHHHHHHHHHHHHCTTC---EEEEEE
T ss_pred HHhhhcCCCccEEEecccce---EEEecchHHHHhhcccCcccCcccc-eeeehhhHHHHHHHHHhhcCCc---eEEEEe
Confidence 67888999999999999888 9999999999964322222232211 0000000001112222333332 334555
Q ss_pred ecCCcEEEEEEEEEeeec
Q 002356 554 TKSGKKFWNLFHLQPMRD 571 (931)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d 571 (931)
.-.|+.+.+.+......+
T Consensus 95 n~~~e~yQIRmE~iSf~~ 112 (127)
T 4ew7_A 95 NFHGEIYQIRMENISFDN 112 (127)
T ss_dssp EETTEEEEEEEEEEECTT
T ss_pred ecCCceEEEEEEEeeecC
Confidence 677888877776555543
No 415
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=62.36 E-value=41 Score=39.88 Aligned_cols=82 Identities=21% Similarity=0.330 Sum_probs=50.6
Q ss_pred cceeEEEEeCCeEEEEEeccCCCCHHHHHhhCC-----------CC--CC--CHHHHHHHHHHHH--HHHHHHHHCCCcc
Q 002356 732 PALYASFQTKTHVCLITDYCPGGELFLLLDRQP-----------TK--VL--KEDAVRFYAAEVV--VALEYLHCQGIIY 794 (931)
Q Consensus 732 v~l~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~-----------~~--~l--~~~~~~~i~~qil--~aL~~LH~~gIiH 794 (931)
+..|.+........| .|++++.+|.+++...+ .. .+ .......+++.++ ..+.|+= ||
T Consensus 476 i~~Y~Vipls~~~GL-IE~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YIL--Gl-- 550 (696)
T 2x6h_A 476 LTPYKVLATSSKHGF-LQYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLL--GV-- 550 (696)
T ss_dssp CCCCCEEESSTTCEE-EECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHH--TC--
T ss_pred EeccEEEeccCCCCe-eeeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHc--cC--
Confidence 445666665555444 46666667766665421 10 01 1234445555554 2334443 43
Q ss_pred CCCCCCcEEEecCCcEEEEeccCC
Q 002356 795 RDLKPENVLLQGNGHVSLTDFDLS 818 (931)
Q Consensus 795 rDIKP~NIll~~~g~vkL~DFG~a 818 (931)
+|=.++||||+.+|.+.=+|||.+
T Consensus 551 GDRH~~NILid~tG~v~HIDFG~~ 574 (696)
T 2x6h_A 551 GDRHLDNLLLTTNGKLFHIDFGYI 574 (696)
T ss_dssp CCCCTTTEEECTTSCEEECCCCSC
T ss_pred CCCCCcceEEeCCCCEEEEeehhh
Confidence 699999999999999999999987
No 416
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=58.18 E-value=44 Score=30.74 Aligned_cols=91 Identities=19% Similarity=0.225 Sum_probs=51.5
Q ss_pred hHHHHHHHHHhcC-CcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEE
Q 002356 187 VSDIVKDALSTFQ-QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (931)
Q Consensus 187 ~~~~~~~ile~~~-~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~ 265 (931)
.+..++.+-+... +.++++|. +|..++... .+.+|+++. .++ +..++ .|+.+..
T Consensus 43 l~~~~~~~~~~~~~~~i~v~d~---~G~~~~~~~----------~~~iG~~~~---~~~--------~~~al-~G~~~~~ 97 (142)
T 3by8_A 43 IQAIAEAVRKRNDLLFIVVTDM---QSLRYSHPE----------AQRIGQPFK---GDD--------ILKAL-NGEENVA 97 (142)
T ss_dssp HHHHHHHHHHHTTCSEEEEEET---TCBBSCCSS----------GGGTTSBCC---CGG--------GTGGG-GTCCEEE
T ss_pred HHHHHHHHHhhcCCcEEEEECC---CCcEEECCC----------hHHCCCcCC---CCC--------HHHHh-CCCeEEE
Confidence 3445555544433 47888887 666665442 346887643 111 12233 3444433
Q ss_pred EEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhh
Q 002356 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHT 307 (931)
Q Consensus 266 e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk 307 (931)
.. ....|.. +. ...||+|++|+++|++.+..++....
T Consensus 98 ~~--~~~~g~~--~~-~~~PV~~~~g~viGvv~vg~~~~~~~ 134 (142)
T 3by8_A 98 IN--RGFLAQA--LR-VFTPIYDENHKQIGVVAIGLELSRVT 134 (142)
T ss_dssp EE--CSSSSCE--EE-EEEEEECTTSCEEEEEEEEEEHHHHH
T ss_pred Ee--cCccEEE--EE-EEEeEEcCCCCEEEEEEEeEEHHHHH
Confidence 21 1222322 33 34599988899999999999887543
No 417
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=55.38 E-value=1.5e+02 Score=34.59 Aligned_cols=82 Identities=20% Similarity=0.347 Sum_probs=52.2
Q ss_pred cceeEEEEeCCeEEEEEeccCCCCHHHHHhhC-----------CCCC----CCHHHHHHHHHHHHH--HHHHHHHCCCcc
Q 002356 732 PALYASFQTKTHVCLITDYCPGGELFLLLDRQ-----------PTKV----LKEDAVRFYAAEVVV--ALEYLHCQGIIY 794 (931)
Q Consensus 732 v~l~~~~~~~~~~~lVmE~~~ggsL~~~l~~~-----------~~~~----l~~~~~~~i~~qil~--aL~~LH~~gIiH 794 (931)
+..|.+........+ +|++++.++.+++... +... ...+....+++.++- .+.|+= ||
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YIL--Gi-- 476 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYIL--GV-- 476 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHH--TC--
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheee--ec--
Confidence 556667766666655 5777776666655432 1100 123344555555553 334443 44
Q ss_pred CCCCCCcEEEecCCcEEEEeccCC
Q 002356 795 RDLKPENVLLQGNGHVSLTDFDLS 818 (931)
Q Consensus 795 rDIKP~NIll~~~g~vkL~DFG~a 818 (931)
+|=.++||||+.+|++.=+|||.+
T Consensus 477 gDRH~~NILld~tG~v~HIDFG~~ 500 (614)
T 3ls8_A 477 GDRHLDNLLLTKTGKLFHIDFGYI 500 (614)
T ss_dssp CCCCTTSEEECTTSCEEECCCSSC
T ss_pred cCCCCcceeEcCCCCEeeeehHHh
Confidence 688999999999999999999987
No 418
>3lif_A Putative diguanylate cyclase (ggdef) with PAS/PAC; PDC fold, signaling protein; HET: CIT; 2.70A {Rhodopseudomonas palustris}
Probab=50.44 E-value=79 Score=31.64 Aligned_cols=96 Identities=13% Similarity=0.179 Sum_probs=57.6
Q ss_pred chHHHHHHHHHhcCC--cEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHH--cCC
Q 002356 186 RVSDIVKDALSTFQQ--TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQ--NGQ 261 (931)
Q Consensus 186 ~~~~~~~~ile~~~~--~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~--~g~ 261 (931)
.....|+.+....+. .++++|. +|+ +..+.. .. ..+.++ .....+..++. .+.
T Consensus 55 ~~~~~L~~~~~~~~~~~~i~i~d~---~G~-~~~s~~------~~---~~~~~~----------~~r~~f~~a~~~~~~~ 111 (254)
T 3lif_A 55 VFNERLRALADNLPQLSDVAILDA---DGQ-LTYASV------KP---VPALDN----------SDRSYFRYHRANDDHT 111 (254)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEECT---TSB-EEEESS------SS---EECCBC----------TTSHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHhcCCccceEEEECC---CCC-EecCCC------CC---CCCCCc----------ccHHHHHHHHhCCCCC
Confidence 345667777776665 6888887 888 443221 00 111111 11234566666 455
Q ss_pred cEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhh
Q 002356 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (931)
Q Consensus 262 ~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITer 306 (931)
.+-.+...-...|. |+-....||++.+|++.|+++...++...
T Consensus 112 ~~is~p~~~~~~g~--~~i~~~~pi~~~~g~~~Gvl~~~i~l~~l 154 (254)
T 3lif_A 112 LLITGPIQSRTSGV--WVFVVSRRLETTDGKFFGVVVATIESEYF 154 (254)
T ss_dssp CEEEEEEECTTTCC--EEEEEEEEEECTTCCEEEEEEEEECHHHH
T ss_pred eEECCceecCCCCc--EEEEEEeeeeCCCCCEeEEEEEEECHHHH
Confidence 55555443334554 56666789999899999999988887543
No 419
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=49.70 E-value=1.9 Score=49.17 Aligned_cols=64 Identities=3% Similarity=-0.061 Sum_probs=17.5
Q ss_pred cccccccccCcEEEEEEEEecCCeEEEE------EEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE
Q 002356 672 RPIKPLGSGDTGSVHLVELCGSGQYFAM------KAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (931)
Q Consensus 672 ~i~~~LG~G~~g~Vy~~~~~~~~~~~Av------K~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (931)
.+.+.|| ||.||++........||+ |..+... ........+.+|..+++.++|||+++.+.+..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~-~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDG-VSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCcccccccc-ccccccccccccccccccccccccCCCcceEE
Confidence 3455566 999999988655567888 6544322 22334456778999999999999999987653
No 420
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=48.76 E-value=48 Score=29.87 Aligned_cols=77 Identities=16% Similarity=0.174 Sum_probs=44.6
Q ss_pred ceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEE
Q 002356 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWN 562 (931)
Q Consensus 483 d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~wv 562 (931)
+.|+++|.+|. .+.... .+.+|+++.. .+. +..++. |+.+.... .|...+.
T Consensus 51 ~~i~v~d~~G~---~~a~~~----------~~~iG~~~~~--~~~--------~~~al~-G~~~~~~~-----~g~~g~~ 101 (131)
T 1p0z_A 51 TYITVGDASGQ---RLYHVN----------PDEIGKSMEG--GDS--------DEALIN-AKSYVSVR-----KGSLGSS 101 (131)
T ss_dssp SEEEEEETTSB---EEECSS----------GGGTTSBCCS--SCC--------HHHHHH-CCCEEEEE-----EETTEEE
T ss_pred CEEEEEcCCCc---EEEecC----------hhhCCCcccC--CCc--------HHHHhC-CCeEEEEE-----Eccceee
Confidence 68999999877 654332 3457776321 111 223343 44433322 1222233
Q ss_pred EEEEEeeecCCCCEEEEEEEEecCCc
Q 002356 563 LFHLQPMRDQKGEVQYFIGVQLDGSE 588 (931)
Q Consensus 563 ~~~~~pi~d~~G~~~~~vgi~rDITe 588 (931)
.....||++++|+++|++.+..++..
T Consensus 102 ~~~~~PV~~~~g~viGvv~vg~~l~~ 127 (131)
T 1p0z_A 102 LRGKSPIQDATGKVIGIVSVGYTIEQ 127 (131)
T ss_dssp EEEEEEEECTTCCEEEEEEEEEEGGG
T ss_pred EEEEEeEECCCCCEEEEEEEEEEhHH
Confidence 34445999888999999999887654
No 421
>4e04_A Bacteriophytochrome (light-regulated signal trans histidine kinase), PHYB1; bacteriophytochrome chromophore binding domain; HET: LBV; 1.79A {Rhodopseudomonas palustris}
Probab=47.52 E-value=30 Score=37.01 Aligned_cols=54 Identities=17% Similarity=0.247 Sum_probs=40.3
Q ss_pred cEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCC
Q 002356 201 TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (931)
Q Consensus 201 ~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~ 261 (931)
+++++| .+++|+.++..+.+++|.++++++|+++..+..+ .....+...+....
T Consensus 31 ~Ll~~~---~~~~I~~~S~N~~~~lg~~~~~~lG~~l~~ll~~----~~~~~l~~~l~~~~ 84 (327)
T 4e04_A 31 LLLALA---ADMTIVAGSDNLPELTGLAIGALIGRSAADVFDS----ETHNRLTIALAEPG 84 (327)
T ss_dssp EEEEEC---TTCBEEEEETTHHHHHSCCHHHHTTCBHHHHBCH----HHHHHHHHHHHSCS
T ss_pred EEEEEc---CCCeEEEEcccHHHHhCCChHhhcCCCHHHHcCH----HHHHHHHHHhhccc
Confidence 344555 3889999999999999999999999998766543 34455666665543
No 422
>4ew7_A Conjugative transfer: regulation; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology; 1.67A {Salmonella enterica subsp}
Probab=47.45 E-value=19 Score=31.12 Aligned_cols=44 Identities=14% Similarity=0.282 Sum_probs=33.7
Q ss_pred ccccchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCC
Q 002356 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYT 228 (931)
Q Consensus 182 ~~l~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys 228 (931)
+.++..--..+.+..++|..+.+-+.... |+|+|.+|.+|+--+
T Consensus 13 QSVnk~iL~iq~iY~nSPVpVCVRNq~Rk---ilYaN~aF~elF~Ke 56 (127)
T 4ew7_A 13 QSVNKYILSIQDIYKNSPVPVCVRNQSRK---IIYANGAFIELFSKE 56 (127)
T ss_dssp CHHHHHHHHHHHHHTTCSSCEEEECTTSC---EEEECHHHHHHTTSC
T ss_pred HHHHHHHHhHHhhhcCCCccEEEecccce---EEEecchHHHHhhcc
Confidence 33444444567788999999999988555 999999999996543
No 423
>4dah_A Sporulation kinase D; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology, PAS-like fold; 2.03A {Bacillus subtilis} PDB: 4dbj_A 4dbi_A 4dak_A 3fos_A
Probab=46.28 E-value=42 Score=32.90 Aligned_cols=90 Identities=10% Similarity=0.045 Sum_probs=54.0
Q ss_pred HHHHHhhcc--ceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEE
Q 002356 474 LATTLERIE--KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (931)
Q Consensus 474 l~~i~e~~~--d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~ 551 (931)
|..+....+ ..++++|.+|. ++..+.. ...+ ....+++ .+..++..+..+-.+..
T Consensus 60 L~~~~~~~~~~~~i~i~d~~G~---~~~~~~~----------~~~~------~~~~~r~----~f~~a~~~~~~~is~~~ 116 (217)
T 4dah_A 60 LEKTFDSEPRFSGLYFLNAKGD---VTASTTE----------LKTK------VNLADRS----FFIKAKETKKTVISDSY 116 (217)
T ss_dssp HHHHHTTCTTEEEEEEEETTCB---EEEESSC----------CSSC------CBCTTSH----HHHHHHHHCSCEECCCE
T ss_pred HHHHHhcCCcccEEEEECCCCc---EEEecCC----------CCCC------CCcchhH----HHHHHHhcCCcEEeceE
Confidence 555555544 47899999888 7765420 0011 1112222 33445555665544443
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCc
Q 002356 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSE 588 (931)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITe 588 (931)
.-..+|. ++-....|+++.+|++.|++++..++..
T Consensus 117 ~~~~~g~--~~i~ia~pi~~~~g~~~Gvl~~~i~l~~ 151 (217)
T 4dah_A 117 SSRITGQ--PIFTICVPVLDSKRNVTDYLVAAIQIDY 151 (217)
T ss_dssp ECTTTCS--EEEEEEEEEECTTSCEEEEEEEEEEHHH
T ss_pred EcCCCCC--EEEEEEEEEECCCCCEEEEEEEEEcHHH
Confidence 3344666 5666678999989999999998777544
No 424
>4e04_A Bacteriophytochrome (light-regulated signal trans histidine kinase), PHYB1; bacteriophytochrome chromophore binding domain; HET: LBV; 1.79A {Rhodopseudomonas palustris}
Probab=45.00 E-value=25 Score=37.66 Aligned_cols=55 Identities=18% Similarity=0.231 Sum_probs=40.9
Q ss_pred ceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCC
Q 002356 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQT 544 (931)
Q Consensus 483 d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~ 544 (931)
-+++++|.+ ++|+.++..+.+++|.+.++++|++...+..+ .....+...+....
T Consensus 30 G~Ll~~~~~---~~I~~~S~N~~~~lg~~~~~~lG~~l~~ll~~----~~~~~l~~~l~~~~ 84 (327)
T 4e04_A 30 GLLLALAAD---MTIVAGSDNLPELTGLAIGALIGRSAADVFDS----ETHNRLTIALAEPG 84 (327)
T ss_dssp SEEEEECTT---CBEEEEETTHHHHHSCCHHHHTTCBHHHHBCH----HHHHHHHHHHHSCS
T ss_pred eEEEEEcCC---CeEEEEcccHHHHhCCChHhhcCCCHHHHcCH----HHHHHHHHHhhccc
Confidence 456677744 44999999999999999999999997777653 34455666665443
No 425
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=43.08 E-value=1.5e+02 Score=36.91 Aligned_cols=41 Identities=17% Similarity=0.388 Sum_probs=29.9
Q ss_pred HHHHHHHHH--HHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCC
Q 002356 774 RFYAAEVVV--ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (931)
Q Consensus 774 ~~i~~qil~--aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a 818 (931)
..+++.++- .+.|+ .|| +|=.++||||+.+|++.=+|||.+
T Consensus 918 ~nF~~S~A~ysvv~Yi--Lgi--gDRH~~NILid~tG~v~HIDFG~~ 960 (1091)
T 3hhm_A 918 DLFTRSCAGYCVATFI--LGI--GDRHNSNIMVKDDGQLFHIDFGHF 960 (1091)
T ss_dssp HHHHHHHHHHHHHHHH--HTC--CCCCTTTEEEETTSCEEECCCCCC
T ss_pred HHHHHHhhhhhheEEE--Eee--cCCCCcceEEeCCCCEEEEeehhh
Confidence 344554442 33343 344 688999999999999999999987
No 426
>3e4o_A C4-dicarboxylate transport sensor protein DCTB; PAS domain, N-TERM helical dimerization domain, transferase; 2.30A {Sinorhizobium meliloti} PDB: 3e4p_A 3e4q_A 2zbb_A
Probab=39.78 E-value=3.3e+02 Score=28.39 Aligned_cols=93 Identities=13% Similarity=0.051 Sum_probs=51.5
Q ss_pred HHHHHHHHhc-CCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEE
Q 002356 189 DIVKDALSTF-QQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 267 (931)
Q Consensus 189 ~~~~~ile~~-~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~ 267 (931)
..++.+.+.. -..++++|. +|+++..+.. -.+...+|.++ .....+.+++..+.... +
T Consensus 102 ~~L~~~~~~~~~~~i~v~d~---~G~viass~~------~~p~~~~g~d~----------~~R~yf~~Al~g~~~~~--~ 160 (305)
T 3e4o_A 102 RKLEALATSAEAAVIYLIDR---SGVAVAASNW------QEPTSFVGNDY----------AFRDYFRLAVRDGMAEH--F 160 (305)
T ss_dssp HHHHHHHHHSSCSEEEEEET---TSBEEEETTT------TSTTCCTTCBC----------TTSHHHHHHHHHSEEEE--E
T ss_pred HHHHHHHhccCccEEEEECC---CCCEEEeCCC------cCcccccCCCc----------cccHHHHHHHhcCCcEE--E
Confidence 4445444433 347889998 7778865431 11122234332 12234556666543221 2
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchh
Q 002356 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (931)
Q Consensus 268 ~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITe 305 (931)
..-...|. ++-....||++ +|+++|++++..|+..
T Consensus 161 ~~~~~tg~--~~i~~a~PV~~-~G~viGVv~v~i~l~~ 195 (305)
T 3e4o_A 161 AMGTVSKR--PGLYISRRVDG-PGGPLGVIVAKLEFDG 195 (305)
T ss_dssp EECTTTCC--EEEEEEEEEEE-TTEEEEEEEEEECCHH
T ss_pred EEecCCCC--EEEEEEEEEcc-CCeEEEEEEEEEcHHH
Confidence 22233444 34556688986 4899999999888764
No 427
>3s7o_A Bacteriophytochrome; biliverdin, PAS, GAF, photoreceptor, fluorescent protein; HET: LBV GOL; 1.24A {Deinococcus radiodurans} PDB: 3s7n_A* 3s7p_A* 3s7q_A* 2o9c_A* 2o9b_A* 1ztu_A*
Probab=32.82 E-value=19 Score=38.76 Aligned_cols=41 Identities=12% Similarity=0.120 Sum_probs=33.9
Q ss_pred cEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCC
Q 002356 201 TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGA 243 (931)
Q Consensus 201 ~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~ 243 (931)
+.+++|. .+++|+.++..+.+++|.++++++|+++..+..+
T Consensus 54 ~LL~l~~--~~~~I~~~S~N~~~~lg~~~~~llG~~l~~ll~~ 94 (343)
T 3s7o_A 54 ALLTADG--HSGEVLQMSLNAATFLGQEPTVLRGQTLAALLPE 94 (343)
T ss_dssp EEEEEET--TTCBEEEEETTHHHHHSSCHHHHTTCBHHHHSTT
T ss_pred EEEEEEC--CCCEEEEEcccHHHHhCcChHHHcCCCHHHHHhH
Confidence 3455654 3788999999999999999999999998877665
No 428
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=32.61 E-value=60 Score=34.77 Aligned_cols=140 Identities=19% Similarity=0.257 Sum_probs=72.3
Q ss_pred ccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEE-------------
Q 002356 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS------------- 737 (931)
Q Consensus 671 y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~------------- 737 (931)
+..++..-.|. +.||.|.. ++..|+||... .-..+.+..++...-.+..|+..-+...
T Consensus 71 v~~I~~s~~Gs-tgvff~~t--d~~~~VVK~s~------~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~ 141 (342)
T 1cja_A 71 FKGIERSEKGT-EGLFFVET--ESGVFIVKRST------NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAA 141 (342)
T ss_dssp EEEEEECCSTT-SCEEEEEE--SSCEEEEECCT------THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHH
T ss_pred eeEEEeccCCC-CCeEEEEe--CCCEEEEeCcH------HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHH
Confidence 44556656665 45666655 47789999431 1122223333333333445543211100
Q ss_pred ----E-----EeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC----Ccc-CCCCCCcEE
Q 002356 738 ----F-----QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG----IIY-RDLKPENVL 803 (931)
Q Consensus 738 ----~-----~~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g----IiH-rDIKP~NIl 803 (931)
+ ......+++|+|.+|..|...-...-...+.....+.+.+ +-++..+..++ .++ .--.|+|||
T Consensus 142 ~~~~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~LG~--Ii~FDi~InN~DR~Pl~W~n~GN~~NIL 219 (342)
T 1cja_A 142 IDKSFRVITTLANQANILLMELVRGITLNKLTTTSAPEVLTKSTMQQLGS--LMALDVIVNNSDRLPIAWTNEGNLDNIM 219 (342)
T ss_dssp HCSSSCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHHHH--HHHHHHHHTCCSSSCSSSCSCCCGGGEE
T ss_pred hhhhhHHHHHhhcccceehhhhcCCCccccchhhhhhhhcCHHHHHhhch--hheehhhhcCCccCcccccCCCChhheE
Confidence 0 0123577999999887765432110001133333333211 33556666552 111 235789999
Q ss_pred EecCCc-EEEEeccCCccc
Q 002356 804 LQGNGH-VSLTDFDLSCLT 821 (931)
Q Consensus 804 l~~~g~-vkL~DFG~a~~~ 821 (931)
+..++. +.++|-+.+...
T Consensus 220 ~~~~n~~~~~IDhn~af~~ 238 (342)
T 1cja_A 220 LSERGATVVPIDSKIIPLD 238 (342)
T ss_dssp EESBTTCEEECSCCCCCCC
T ss_pred EeCCCCeEEEEcCCccccC
Confidence 987554 899999998553
No 429
>3lif_A Putative diguanylate cyclase (ggdef) with PAS/PAC; PDC fold, signaling protein; HET: CIT; 2.70A {Rhodopseudomonas palustris}
Probab=25.07 E-value=2.4e+02 Score=27.94 Aligned_cols=88 Identities=14% Similarity=0.185 Sum_probs=51.0
Q ss_pred HHHHHhhcc--ceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHH--cCCcEEEE
Q 002356 474 LATTLERIE--KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAID--NQTDVTVQ 549 (931)
Q Consensus 474 l~~i~e~~~--d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~--~~~~~~~e 549 (931)
|..+....+ ..|+++|.+|. +...+. . ...+.+ ..+++ .+..++. .+..+-.+
T Consensus 60 L~~~~~~~~~~~~i~i~d~~G~---~~~s~~-------~---~~~~~~------~~~r~----~f~~a~~~~~~~~~is~ 116 (254)
T 3lif_A 60 LRALADNLPQLSDVAILDADGQ---LTYASV-------K---PVPALD------NSDRS----YFRYHRANDDHTLLITG 116 (254)
T ss_dssp HHHHHHHCTTEEEEEEECTTSB---EEEESS-------S---SEECCB------CTTSH----HHHHHHHCCCCCCEEEE
T ss_pred HHHHHhcCCccceEEEECCCCC---EecCCC-------C---CCCCCC------cccHH----HHHHHHhCCCCCeEECC
Confidence 555555555 37999999876 554321 0 001111 12222 3444555 34555555
Q ss_pred EEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecC
Q 002356 550 LINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDG 586 (931)
Q Consensus 550 ~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDI 586 (931)
...-...|. |+-....|+++.+|++.|++++..|+
T Consensus 117 p~~~~~~g~--~~i~~~~pi~~~~g~~~Gvl~~~i~l 151 (254)
T 3lif_A 117 PIQSRTSGV--WVFVVSRRLETTDGKFFGVVVATIES 151 (254)
T ss_dssp EEECTTTCC--EEEEEEEEEECTTCCEEEEEEEEECH
T ss_pred ceecCCCCc--EEEEEEeeeeCCCCCEeEEEEEEECH
Confidence 443334565 56667789999899999999887775
No 430
>3s7o_A Bacteriophytochrome; biliverdin, PAS, GAF, photoreceptor, fluorescent protein; HET: LBV GOL; 1.24A {Deinococcus radiodurans} PDB: 3s7n_A* 3s7p_A* 3s7q_A* 2o9c_A* 2o9b_A* 1ztu_A*
Probab=24.82 E-value=27 Score=37.56 Aligned_cols=42 Identities=10% Similarity=0.044 Sum_probs=34.8
Q ss_pred ceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCC
Q 002356 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGP 526 (931)
Q Consensus 483 d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~ 526 (931)
-+++++|.+ +++|+.++....+++|.+.++++|++...+..+
T Consensus 53 G~LL~l~~~--~~~I~~~S~N~~~~lg~~~~~llG~~l~~ll~~ 94 (343)
T 3s7o_A 53 GALLTADGH--SGEVLQMSLNAATFLGQEPTVLRGQTLAALLPE 94 (343)
T ss_dssp SEEEEEETT--TCBEEEEETTHHHHHSSCHHHHTTCBHHHHSTT
T ss_pred eEEEEEECC--CCEEEEEcccHHHHhCcChHHHcCCCHHHHHhH
Confidence 456677763 445999999999999999999999998877765
No 431
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=23.38 E-value=1.1e+02 Score=27.90 Aligned_cols=76 Identities=16% Similarity=0.139 Sum_probs=43.5
Q ss_pred ceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEE
Q 002356 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWN 562 (931)
Q Consensus 483 d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~wv 562 (931)
+.|+++|.+|. .++.. ..+.+|+++. .+.. ..++ .|+.+.... ....|. .
T Consensus 57 ~~i~v~d~~G~---~~~~~----------~~~~iG~~~~---~~~~--------~~al-~G~~~~~~~--~~~~g~---~ 106 (142)
T 3by8_A 57 LFIVVTDMQSL---RYSHP----------EAQRIGQPFK---GDDI--------LKAL-NGEENVAIN--RGFLAQ---A 106 (142)
T ss_dssp SEEEEEETTCB---BSCCS----------SGGGTTSBCC---CGGG--------TGGG-GTCCEEEEE--CSSSSC---E
T ss_pred cEEEEECCCCc---EEECC----------ChHHCCCcCC---CCCH--------HHHh-CCCeEEEEe--cCccEE---E
Confidence 68999999876 44332 2456787643 1111 1223 344433321 122332 2
Q ss_pred EEEEEeeecCCCCEEEEEEEEecCCc
Q 002356 563 LFHLQPMRDQKGEVQYFIGVQLDGSE 588 (931)
Q Consensus 563 ~~~~~pi~d~~G~~~~~vgi~rDITe 588 (931)
.....||++++|+++|++.+..++..
T Consensus 107 ~~~~~PV~~~~g~viGvv~vg~~~~~ 132 (142)
T 3by8_A 107 LRVFTPIYDENHKQIGVVAIGLELSR 132 (142)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEHHH
T ss_pred EEEEEeEEcCCCCEEEEEEEeEEHHH
Confidence 33445999888999999998877644
No 432
>3clo_A Transcriptional regulator; NP_811094.1, bacterial regulatory proteins, LUXR family, structural genomics; 2.04A {Bacteroides thetaiotaomicron vpi-5482}
Probab=23.19 E-value=4.3e+02 Score=26.49 Aligned_cols=45 Identities=16% Similarity=0.168 Sum_probs=34.7
Q ss_pred chHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhh
Q 002356 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEV 232 (931)
Q Consensus 186 ~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEl 232 (931)
................++++|.. .+.+.+++.++..++||+.+++
T Consensus 30 ~~~~~~~~~~~~~~~~~~l~D~~--~~~~~~~s~~~~~llG~~~~~~ 74 (258)
T 3clo_A 30 QHQQFVRSLTEVNGGCAVISDLS--NRKSYVTVHPWANFLGLTPEEA 74 (258)
T ss_dssp HHHHHHHHHHHHHSSEEEEEETT--TTEEEEEECTTCGGGCCCHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEEEcC--CCeEEEEeCCHHHHhCCCcccc
Confidence 34344445555566788899965 7789999999999999999987
No 433
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=23.17 E-value=81 Score=39.42 Aligned_cols=24 Identities=21% Similarity=0.418 Sum_probs=23.0
Q ss_pred CCCCCCcEEEecCCcEEEEeccCC
Q 002356 795 RDLKPENVLLQGNGHVSLTDFDLS 818 (931)
Q Consensus 795 rDIKP~NIll~~~g~vkL~DFG~a 818 (931)
+|=.++||||+.+|.+.=+|||.+
T Consensus 940 GDRH~~NILid~tG~v~HIDFG~~ 963 (1092)
T 2y3a_A 940 GDRHSDNIMVKKTGQLFHIDFGHI 963 (1092)
T ss_dssp CCCCTTTEEECTTSCEEECCCSCC
T ss_pred CCCCCccEEEecCCCEEEEeehhh
Confidence 799999999999999999999987
No 434
>3c8c_A Methyl-accepting chemotaxis protein; structural genomics, unknown function, uncharacterized protein; 1.50A {Vibrio cholerae o1 biovar eltor str}
Probab=22.88 E-value=3.1e+02 Score=26.32 Aligned_cols=53 Identities=17% Similarity=0.210 Sum_probs=32.3
Q ss_pred HHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCC-CCEEEEEEEEecchh
Q 002356 251 AKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDE-GKVLKFIGMQVEVSK 305 (931)
Q Consensus 251 ~~l~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~-G~v~~~v~~~~DITe 305 (931)
..+..++..+..+-.....-..+|. ++-....|+++.+ |++.|++++..++..
T Consensus 93 ~w~~~~~~~~~~~~s~~~~~~~~~~--~~i~~~~pi~~~~~g~~~Gvl~~~i~~~~ 146 (240)
T 3c8c_A 93 PWYKDAKNAGKLVITAPYADSASGE--ILVSVATPVKDSATGQFLGSIFYDVSLAE 146 (240)
T ss_dssp HHHHHHHHHTSCEECCCEECTTTCC--EEEEEEEEEECTTTCCEEEEEEEEECHHH
T ss_pred hHHHHHHhcCCcEEeeceEcCCCCe--EEEEEEEEEEECCCCeEEEEEEEEEEHHH
Confidence 3455555555543333222223455 4555668999865 999999988877654
Done!