Query 002358
Match_columns 931
No_of_seqs 668 out of 4474
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 23:05:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002358.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002358hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 9.8E-50 3.3E-54 443.4 19.5 259 610-887 42-320 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 2.6E-50 8.7E-55 442.2 14.6 261 608-887 12-290 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 4.1E-50 1.4E-54 442.4 15.5 263 604-885 21-305 (308)
4 3omv_A RAF proto-oncogene seri 100.0 1.1E-48 3.7E-53 429.6 20.5 259 609-886 36-300 (307)
5 4g3f_A NF-kappa-beta-inducing 100.0 2.1E-47 7.3E-52 423.5 19.9 260 611-895 60-325 (336)
6 4fih_A Serine/threonine-protei 100.0 1.6E-47 5.4E-52 425.8 18.6 248 610-879 75-323 (346)
7 4b9d_A Serine/threonine-protei 100.0 2.7E-47 9.2E-52 424.6 19.4 249 610-879 25-276 (350)
8 3hmm_A TGF-beta receptor type- 100.0 4.2E-47 1.4E-51 418.6 18.8 268 611-888 5-299 (303)
9 3fpq_A Serine/threonine-protei 100.0 1.3E-46 4.3E-51 410.2 21.3 244 612-879 29-282 (290)
10 4ase_A Vascular endothelial gr 100.0 2.6E-47 9E-52 427.4 15.0 266 605-888 60-349 (353)
11 4fie_A Serine/threonine-protei 100.0 3.2E-46 1.1E-50 425.2 21.7 247 611-879 153-400 (423)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 7.5E-47 2.6E-51 414.3 13.5 246 610-878 33-283 (311)
13 3hyh_A Carbon catabolite-derep 100.0 8.5E-46 2.9E-50 400.3 17.9 244 610-879 14-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 5E-46 1.7E-50 407.6 10.3 241 610-874 25-271 (304)
15 4g31_A Eukaryotic translation 100.0 1.5E-44 5E-49 396.9 19.7 249 610-879 6-279 (299)
16 2qkw_B Protein kinase; three-h 100.0 2.9E-42 9.8E-47 383.0 22.5 277 610-889 40-318 (321)
17 4b99_A Mitogen-activated prote 100.0 1.7E-42 5.9E-47 394.8 17.8 259 610-879 55-344 (398)
18 3uim_A Brassinosteroid insensi 100.0 7E-42 2.4E-46 380.4 17.6 286 600-885 19-310 (326)
19 4f9c_A Cell division cycle 7-r 100.0 5.9E-41 2E-45 378.0 20.9 194 610-814 22-249 (361)
20 3uto_A Twitchin; kinase, muscl 100.0 6.3E-41 2.2E-45 400.0 20.1 250 610-879 158-410 (573)
21 3v5w_A G-protein coupled recep 100.0 1.5E-40 5.1E-45 394.9 19.4 246 611-879 191-449 (689)
22 3s95_A LIMK-1, LIM domain kina 100.0 1.4E-40 4.8E-45 367.4 17.1 259 609-889 10-285 (310)
23 3p86_A Serine/threonine-protei 100.0 3.9E-40 1.3E-44 364.3 18.0 262 607-888 35-300 (309)
24 2psq_A Fibroblast growth facto 100.0 2.4E-39 8.2E-44 367.2 21.5 263 608-889 80-367 (370)
25 4hcu_A Tyrosine-protein kinase 100.0 1.6E-39 5.5E-44 351.2 18.2 256 609-886 10-266 (269)
26 2nru_A Interleukin-1 receptor- 100.0 1E-38 3.4E-43 351.6 24.7 280 599-886 13-306 (307)
27 3sxs_A Cytoplasmic tyrosine-pr 100.0 9.2E-40 3.2E-44 352.7 16.0 260 607-888 6-266 (268)
28 3fxz_A Serine/threonine-protei 100.0 3.4E-39 1.2E-43 354.7 20.6 248 610-879 21-269 (297)
29 3kul_A Ephrin type-A receptor 100.0 1.2E-39 4.1E-44 363.0 16.9 264 605-889 45-316 (325)
30 3soc_A Activin receptor type-2 100.0 7.5E-40 2.6E-44 364.0 15.0 265 609-887 24-319 (322)
31 3ugc_A Tyrosine-protein kinase 100.0 2E-40 6.8E-45 363.3 9.1 268 606-887 7-292 (295)
32 3gen_A Tyrosine-protein kinase 100.0 2E-39 6.9E-44 352.9 16.7 261 606-888 21-282 (283)
33 4eqm_A Protein kinase; transfe 100.0 3.8E-39 1.3E-43 353.7 18.3 263 609-889 11-278 (294)
34 3q4u_A Activin receptor type-1 100.0 5.8E-39 2E-43 352.1 18.9 259 609-884 8-300 (301)
35 3zgw_A Maternal embryonic leuc 100.0 3.6E-39 1.2E-43 362.2 17.3 248 609-879 10-260 (347)
36 2c30_A Serine/threonine-protei 100.0 2.6E-38 8.7E-43 351.7 24.0 245 613-879 49-294 (321)
37 3cbl_A C-FES, proto-oncogene t 100.0 9.6E-40 3.3E-44 371.5 11.8 259 608-887 113-375 (377)
38 3fe3_A MAP/microtubule affinit 100.0 8.1E-39 2.8E-43 356.8 18.6 245 610-879 16-264 (328)
39 2qol_A Ephrin receptor; recept 100.0 1.3E-39 4.3E-44 369.9 11.4 262 606-888 42-311 (373)
40 1qcf_A Haematopoetic cell kina 100.0 1.9E-39 6.6E-44 378.2 13.0 259 607-887 186-445 (454)
41 1opk_A P150, C-ABL, proto-onco 100.0 3.6E-39 1.2E-43 379.8 15.5 258 608-886 219-478 (495)
42 4euu_A Serine/threonine-protei 100.0 7.3E-38 2.5E-42 347.2 24.8 272 610-886 10-309 (319)
43 3tt0_A Basic fibroblast growth 100.0 1.2E-38 4.3E-43 362.9 18.6 272 605-895 65-361 (382)
44 1csn_A Casein kinase-1; phosph 100.0 6.9E-38 2.4E-42 343.0 23.4 264 609-889 10-286 (298)
45 1mp8_A Focal adhesion kinase 1 100.0 8.5E-39 2.9E-43 348.0 15.6 261 607-889 13-279 (281)
46 2izr_A Casein kinase I isoform 100.0 3.7E-38 1.3E-42 351.4 21.0 261 610-888 10-283 (330)
47 1o6l_A RAC-beta serine/threoni 100.0 3.3E-38 1.1E-42 353.1 20.2 246 610-879 6-260 (337)
48 3t9t_A Tyrosine-protein kinase 100.0 1.7E-38 5.9E-43 342.1 17.3 256 609-886 8-264 (267)
49 3niz_A Rhodanese family protei 100.0 3.8E-38 1.3E-42 348.6 20.1 261 609-879 21-300 (311)
50 2eva_A TAK1 kinase - TAB1 chim 100.0 3.3E-38 1.1E-42 348.4 19.3 262 609-893 8-270 (307)
51 3kfa_A Tyrosine-protein kinase 100.0 1.2E-38 4.2E-43 347.4 15.6 263 605-888 9-273 (288)
52 3l9p_A Anaplastic lymphoma kin 100.0 5.8E-39 2E-43 363.7 13.4 266 605-889 67-348 (367)
53 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 5.8E-39 2E-43 373.9 13.7 260 607-888 182-442 (452)
54 1k9a_A Carboxyl-terminal SRC k 100.0 1.3E-38 4.5E-43 370.7 16.6 254 608-888 192-447 (450)
55 4e5w_A Tyrosine-protein kinase 100.0 3.3E-39 1.1E-43 354.4 10.9 267 605-885 17-301 (302)
56 2ivs_A Proto-oncogene tyrosine 100.0 1.7E-38 5.8E-43 350.6 16.3 262 607-887 21-312 (314)
57 3tki_A Serine/threonine-protei 100.0 2.7E-38 9.1E-43 351.9 17.8 250 610-879 8-261 (323)
58 3lb7_A RAF proto-oncogene seri 100.0 4E-38 1.4E-42 347.8 18.7 265 605-888 32-302 (307)
59 2yab_A Death-associated protei 100.0 1E-37 3.4E-42 352.5 22.2 250 609-879 12-272 (361)
60 1luf_A Muscle-specific tyrosin 100.0 2.5E-38 8.7E-43 353.9 17.0 262 608-888 46-337 (343)
61 3c0i_A Peripheral plasma membr 100.0 5.4E-38 1.9E-42 353.5 19.5 256 606-879 21-286 (351)
62 2bdw_A Hypothetical protein K1 100.0 6E-38 2.1E-42 354.6 20.0 255 604-879 24-284 (362)
63 3poz_A Epidermal growth factor 100.0 1.1E-38 3.7E-43 355.4 13.6 259 607-887 13-279 (327)
64 3lxl_A Tyrosine-protein kinase 100.0 3.9E-39 1.3E-43 358.8 9.8 268 608-889 22-306 (327)
65 2y0a_A Death-associated protei 100.0 8.3E-38 2.8E-42 348.3 20.6 251 608-879 10-271 (326)
66 4f0f_A Serine/threonine-protei 100.0 7.9E-38 2.7E-42 341.0 19.8 254 607-884 17-287 (287)
67 1qpc_A LCK kinase; alpha beta 100.0 2E-38 6.8E-43 344.3 15.0 261 607-889 11-272 (279)
68 3vhe_A Vascular endothelial gr 100.0 1.4E-38 4.7E-43 358.6 14.0 264 607-888 20-357 (359)
69 1t46_A HOMO sapiens V-KIT hard 100.0 1.5E-38 5.2E-43 350.8 14.0 264 607-888 21-309 (313)
70 3lxp_A Non-receptor tyrosine-p 100.0 1.5E-38 5.1E-43 352.8 13.8 262 612-889 34-313 (318)
71 3dtc_A Mitogen-activated prote 100.0 2.1E-38 7.1E-43 342.4 14.6 250 609-884 7-271 (271)
72 3qd2_B Eukaryotic translation 100.0 7.2E-38 2.5E-42 347.9 19.3 250 609-879 6-325 (332)
73 4dc2_A Protein kinase C IOTA t 100.0 8.8E-38 3E-42 356.6 20.1 248 610-874 53-307 (396)
74 3qup_A Tyrosine-protein kinase 100.0 2.9E-38 1E-42 350.7 15.6 265 606-889 20-301 (323)
75 1rjb_A FL cytokine receptor; k 100.0 2.3E-38 7.8E-43 354.8 14.7 267 605-889 41-337 (344)
76 1ob3_A PFPK5, cell division co 100.0 7.2E-38 2.5E-42 342.1 18.2 259 611-879 4-280 (288)
77 3mdy_A Bone morphogenetic prot 100.0 2.5E-37 8.5E-42 344.8 22.5 272 603-888 31-333 (337)
78 2zv2_A Calcium/calmodulin-depe 100.0 1.3E-37 4.4E-42 341.6 19.7 247 610-879 14-292 (298)
79 4fvq_A Tyrosine-protein kinase 100.0 2.7E-38 9.4E-43 344.8 14.2 255 607-888 6-277 (289)
80 1tki_A Titin; serine kinase, m 100.0 1.6E-37 5.4E-42 345.3 20.2 249 610-879 6-257 (321)
81 3op5_A Serine/threonine-protei 100.0 1.4E-37 4.8E-42 351.8 20.1 270 608-889 34-332 (364)
82 3kn6_A Ribosomal protein S6 ki 100.0 7.4E-38 2.5E-42 348.6 17.3 249 615-879 17-270 (325)
83 3cc6_A Protein tyrosine kinase 100.0 4.4E-38 1.5E-42 342.2 15.1 259 609-889 12-276 (281)
84 3soa_A Calcium/calmodulin-depe 100.0 1.8E-37 6.3E-42 359.6 21.2 253 607-879 9-267 (444)
85 3o0g_A Cell division protein k 100.0 1.3E-37 4.4E-42 340.6 18.6 260 611-879 4-282 (292)
86 2pvf_A Fibroblast growth facto 100.0 8.4E-38 2.9E-42 349.1 17.2 266 606-890 32-322 (334)
87 3a8x_A Protein kinase C IOTA t 100.0 1.8E-37 6.2E-42 348.4 19.8 248 610-874 10-264 (345)
88 1b6c_B TGF-B superfamily recep 100.0 3.7E-37 1.3E-41 344.3 22.1 269 603-888 36-338 (342)
89 3ll6_A Cyclin G-associated kin 100.0 5.1E-38 1.7E-42 349.9 15.1 260 607-889 26-311 (337)
90 4aw2_A Serine/threonine-protei 100.0 1.1E-37 3.7E-42 360.4 18.3 253 610-879 75-338 (437)
91 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.9E-38 1.3E-42 354.8 14.2 249 607-879 21-280 (353)
92 3og7_A AKAP9-BRAF fusion prote 100.0 8.1E-38 2.8E-42 341.8 16.1 264 604-886 19-288 (289)
93 2h8h_A Proto-oncogene tyrosine 100.0 1.7E-38 6E-43 377.5 11.6 261 606-888 264-525 (535)
94 1kob_A Twitchin; kinase, intra 100.0 2.6E-37 8.7E-42 352.3 20.7 250 610-879 52-304 (387)
95 3kex_A Receptor tyrosine-prote 100.0 2.7E-38 9.3E-43 351.8 12.2 257 609-887 13-277 (325)
96 4fr4_A YANK1, serine/threonine 100.0 2.6E-37 8.8E-42 351.6 20.1 249 609-879 15-271 (384)
97 1fot_A TPK1 delta, CAMP-depend 100.0 2.2E-37 7.4E-42 343.8 19.0 243 610-879 7-258 (318)
98 3kmu_A ILK, integrin-linked ki 100.0 2.1E-37 7.1E-42 333.9 18.3 252 609-886 10-270 (271)
99 1u59_A Tyrosine-protein kinase 100.0 3.2E-37 1.1E-41 336.6 20.0 259 611-891 11-277 (287)
100 4hgt_A Casein kinase I isoform 100.0 5.4E-37 1.9E-41 335.3 21.5 265 608-889 8-283 (296)
101 3p1a_A MYT1 kinase, membrane-a 100.0 1.6E-37 5.6E-42 343.4 17.4 250 603-879 51-304 (311)
102 2pmi_A Negative RE, cyclin-dep 100.0 2.3E-37 8E-42 343.2 18.5 262 610-879 6-293 (317)
103 2wqm_A Serine/threonine-protei 100.0 4.4E-37 1.5E-41 339.2 20.5 263 610-889 33-300 (310)
104 3a62_A Ribosomal protein S6 ki 100.0 2.2E-37 7.6E-42 345.0 18.3 248 608-879 16-276 (327)
105 4eut_A Serine/threonine-protei 100.0 3.3E-37 1.1E-41 352.9 20.2 274 610-888 10-311 (396)
106 3v8s_A RHO-associated protein 100.0 1.2E-37 4E-42 357.4 16.1 251 610-880 70-330 (410)
107 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.6E-37 5.5E-42 347.3 16.6 244 610-879 10-258 (336)
108 3g33_A Cell division protein k 100.0 2E-37 7E-42 341.7 17.2 266 604-879 4-296 (308)
109 2h34_A Serine/threonine-protei 100.0 6E-37 2.1E-41 338.5 20.9 260 609-888 34-298 (309)
110 2v62_A Serine/threonine-protei 100.0 1.4E-37 4.9E-42 349.0 16.1 269 605-886 33-328 (345)
111 3gxj_A TGF-beta receptor type- 100.0 6.4E-39 2.2E-43 351.9 4.8 260 610-888 4-299 (303)
112 1xjd_A Protein kinase C, theta 100.0 9.5E-38 3.2E-42 350.5 14.5 246 609-878 17-268 (345)
113 3f66_A Hepatocyte growth facto 100.0 5E-37 1.7E-41 336.6 19.8 258 611-889 27-294 (298)
114 2vd5_A DMPK protein; serine/th 100.0 1.9E-37 6.6E-42 355.9 17.2 253 609-879 61-327 (412)
115 2a19_B Interferon-induced, dou 100.0 4.5E-37 1.5E-41 333.9 19.2 255 604-889 6-277 (284)
116 2x4f_A Myosin light chain kina 100.0 3.1E-37 1.1E-41 350.2 18.7 250 614-883 94-348 (373)
117 3uzp_A CKI-delta, CKID, casein 100.0 1.4E-36 4.8E-41 332.3 23.2 263 610-889 10-283 (296)
118 1mqb_A Ephrin type-A receptor 100.0 2.1E-37 7.3E-42 346.0 16.9 263 606-889 41-312 (333)
119 3pls_A Macrophage-stimulating 100.0 3E-37 1E-41 338.0 17.7 260 612-891 24-292 (298)
120 4agu_A Cyclin-dependent kinase 100.0 2.7E-37 9.3E-42 340.8 17.5 263 610-879 4-284 (311)
121 3gni_B Strad alpha; kinase fol 100.0 7.2E-37 2.4E-41 349.1 21.4 260 610-880 26-334 (389)
122 2buj_A Serine/threonine-protei 100.0 2.8E-37 9.5E-42 341.7 17.5 262 608-886 28-306 (317)
123 3f3z_A Calcium/calmodulin-depe 100.0 8.3E-37 2.9E-41 331.2 20.6 250 608-879 8-261 (277)
124 2a2a_A Death-associated protei 100.0 1.3E-36 4.5E-41 337.5 22.6 251 608-879 11-272 (321)
125 2w1i_A JAK2; chromosomal rearr 100.0 6.1E-38 2.1E-42 349.1 11.6 266 608-887 40-323 (326)
126 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.4E-37 1.2E-41 346.8 17.6 243 610-879 42-293 (350)
127 3c1x_A Hepatocyte growth facto 100.0 2.6E-37 8.9E-42 350.8 16.8 260 611-891 91-360 (373)
128 3llt_A Serine/threonine kinase 100.0 1.5E-37 5.3E-42 350.5 14.8 204 603-816 29-263 (360)
129 3dbq_A Dual specificity protei 100.0 2.2E-37 7.4E-42 347.3 15.7 249 610-880 10-274 (343)
130 1p4o_A Insulin-like growth fac 100.0 1.3E-37 4.5E-42 345.1 13.7 262 606-886 22-299 (322)
131 2i1m_A Macrophage colony-stimu 100.0 5.6E-38 1.9E-42 350.0 10.5 264 607-888 44-328 (333)
132 2w4o_A Calcium/calmodulin-depe 100.0 5.9E-37 2E-41 344.8 18.7 249 609-879 53-305 (349)
133 2i0e_A Protein kinase C-beta I 100.0 3.4E-37 1.2E-41 347.0 16.7 247 609-879 20-276 (353)
134 3lzb_A Epidermal growth factor 100.0 2.8E-37 9.7E-42 344.2 15.8 259 608-888 14-280 (327)
135 2ozo_A Tyrosine-protein kinase 100.0 7.4E-37 2.5E-41 368.8 20.6 252 616-889 343-601 (613)
136 2qr7_A Ribosomal protein S6 ki 100.0 5E-37 1.7E-41 344.3 17.7 251 608-879 21-277 (342)
137 3hko_A Calcium/calmodulin-depe 100.0 6.3E-37 2.2E-41 343.0 18.5 256 608-879 25-330 (345)
138 2xir_A Vascular endothelial gr 100.0 4.5E-37 1.6E-41 339.5 17.1 263 608-888 26-312 (316)
139 3g2f_A Bone morphogenetic prot 100.0 4.1E-37 1.4E-41 343.3 16.8 269 609-892 13-324 (336)
140 3cok_A Serine/threonine-protei 100.0 6.8E-37 2.3E-41 332.1 18.1 247 610-879 12-262 (278)
141 2eue_A Carbon catabolite derep 100.0 5.2E-37 1.8E-41 332.6 17.1 243 611-879 15-262 (275)
142 3uc3_A Serine/threonine-protei 100.0 6E-37 2.1E-41 346.4 18.2 252 609-880 20-275 (361)
143 3fdn_A Serine/threonine-protei 100.0 6E-37 2.1E-41 332.8 17.5 245 610-880 10-258 (279)
144 2jii_A Serine/threonine-protei 100.0 7.8E-37 2.7E-41 344.0 19.0 265 609-889 42-339 (352)
145 3brb_A Proto-oncogene tyrosine 100.0 4.1E-37 1.4E-41 339.9 16.4 264 606-888 31-310 (313)
146 3ork_A Serine/threonine protei 100.0 3.3E-37 1.1E-41 340.8 15.5 260 609-887 12-282 (311)
147 1fvr_A Tyrosine-protein kinase 100.0 1.6E-37 5.6E-42 345.6 12.9 265 604-889 20-303 (327)
148 1xbb_A Tyrosine-protein kinase 100.0 5.8E-37 2E-41 335.2 17.0 258 609-889 16-282 (291)
149 2yex_A Serine/threonine-protei 100.0 2.1E-36 7.3E-41 327.4 20.8 251 609-879 7-261 (276)
150 4ejn_A RAC-alpha serine/threon 100.0 2.1E-37 7.2E-42 360.2 13.7 248 609-879 148-404 (446)
151 2zmd_A Dual specificity protei 100.0 6E-37 2.1E-41 350.0 16.9 249 610-880 57-321 (390)
152 2jam_A Calcium/calmodulin-depe 100.0 2.1E-36 7.3E-41 332.9 20.7 250 608-879 8-261 (304)
153 3is5_A Calcium-dependent prote 100.0 1.8E-36 6E-41 330.7 19.6 252 608-879 21-278 (285)
154 1u5q_A Serine/threonine protei 100.0 1.9E-36 6.4E-41 340.6 20.2 246 608-879 53-305 (348)
155 3bhy_A Death-associated protei 100.0 2.4E-36 8.1E-41 328.5 20.3 257 608-885 4-273 (283)
156 3dls_A PAS domain-containing s 100.0 1E-36 3.5E-41 340.9 17.8 242 608-880 23-275 (335)
157 1byg_A CSK, protein (C-termina 100.0 1.7E-37 5.9E-42 336.9 11.2 253 609-888 21-275 (278)
158 2clq_A Mitogen-activated prote 100.0 2.5E-36 8.6E-41 330.1 20.3 248 614-879 27-278 (295)
159 4fl3_A Tyrosine-protein kinase 100.0 7.7E-37 2.6E-41 369.8 17.7 249 615-886 375-631 (635)
160 2ac3_A MAP kinase-interacting 100.0 2E-36 6.7E-41 334.8 19.5 257 611-879 14-295 (316)
161 2y94_A 5'-AMP-activated protei 100.0 1.3E-36 4.6E-41 354.9 19.1 245 610-879 17-266 (476)
162 2rku_A Serine/threonine-protei 100.0 1.6E-36 5.4E-41 332.2 18.4 246 610-879 16-265 (294)
163 1vzo_A Ribosomal protein S6 ki 100.0 7.3E-37 2.5E-41 344.8 16.2 253 609-880 54-322 (355)
164 2r5t_A Serine/threonine-protei 100.0 4.4E-37 1.5E-41 348.6 14.5 249 609-881 38-291 (373)
165 2yfx_A Tyrosine-protein kinase 100.0 4.3E-37 1.5E-41 342.2 14.1 267 604-889 25-307 (327)
166 4aaa_A Cyclin-dependent kinase 100.0 6.2E-37 2.1E-41 341.6 15.3 263 610-879 26-306 (331)
167 3kk8_A Calcium/calmodulin depe 100.0 2.1E-36 7.1E-41 329.1 18.9 249 610-879 7-261 (284)
168 3eqc_A Dual specificity mitoge 100.0 6.5E-37 2.2E-41 345.4 15.1 267 605-879 29-324 (360)
169 3mtl_A Cell division protein k 100.0 7.8E-37 2.7E-41 340.0 15.4 259 611-879 4-281 (324)
170 3gbz_A Kinase, CMGC CDK; ssgci 100.0 7E-37 2.4E-41 341.1 15.0 260 609-879 34-318 (329)
171 1t4h_A Serine/threonine-protei 100.0 4.1E-36 1.4E-40 328.2 20.5 245 611-879 28-282 (290)
172 3oz6_A Mitogen-activated prote 100.0 9.7E-37 3.3E-41 347.9 16.3 203 606-816 6-235 (388)
173 3sv0_A Casein kinase I-like; t 100.0 9E-36 3.1E-40 348.5 23.9 262 610-888 8-280 (483)
174 2vgo_A Serine/threonine-protei 100.0 1.3E-36 4.4E-41 331.1 15.6 245 609-879 14-262 (284)
175 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4E-36 1.4E-40 339.9 20.1 254 608-888 64-341 (365)
176 3lm5_A Serine/threonine-protei 100.0 3.7E-36 1.3E-40 335.0 19.6 260 601-879 20-287 (327)
177 1x8b_A WEE1HU, WEE1-like prote 100.0 1.4E-36 4.9E-41 330.0 15.8 246 607-879 9-279 (289)
178 3a7i_A MST3 kinase, serine/thr 100.0 3.4E-36 1.2E-40 330.9 19.0 247 610-880 23-271 (303)
179 3ttj_A Mitogen-activated prote 100.0 4E-36 1.4E-40 350.8 20.6 259 610-879 63-355 (464)
180 2owb_A Serine/threonine-protei 100.0 3.4E-36 1.2E-40 336.4 19.1 247 609-879 41-291 (335)
181 2acx_A G protein-coupled recep 100.0 2.6E-36 9E-41 357.7 19.1 250 610-879 185-444 (576)
182 1ua2_A CAK, cell division prot 100.0 3.3E-36 1.1E-40 338.1 18.7 262 608-879 9-291 (346)
183 1nxk_A MAP kinase-activated pr 100.0 8.6E-36 2.9E-40 341.6 22.3 245 615-880 68-322 (400)
184 3mi9_A Cell division protein k 100.0 3.5E-36 1.2E-40 338.2 18.7 265 609-879 17-311 (351)
185 2w5a_A Serine/threonine-protei 100.0 1E-36 3.5E-41 330.6 13.6 253 610-882 7-270 (279)
186 2j7t_A Serine/threonine-protei 100.0 2.2E-36 7.6E-41 331.9 16.2 251 609-879 19-275 (302)
187 3i6u_A CDS1, serine/threonine- 100.0 2.5E-36 8.6E-41 348.2 17.3 254 605-879 131-399 (419)
188 1u46_A ACK-1, activated CDC42 100.0 1.5E-36 5.2E-41 331.1 14.3 259 608-887 17-285 (291)
189 2h6d_A 5'-AMP-activated protei 100.0 3.7E-36 1.3E-40 325.7 17.1 245 610-879 12-261 (276)
190 3com_A Serine/threonine-protei 100.0 7E-36 2.4E-40 330.0 19.4 252 606-879 26-278 (314)
191 1wak_A Serine/threonine-protei 100.0 5.9E-36 2E-40 341.2 19.0 268 602-879 30-391 (397)
192 3rp9_A Mitogen-activated prote 100.0 7.2E-36 2.5E-40 348.4 19.7 193 609-808 53-280 (458)
193 3nsz_A CK II alpha, casein kin 100.0 9E-36 3.1E-40 331.5 19.4 256 609-879 36-319 (330)
194 1cm8_A Phosphorylated MAP kina 100.0 4.3E-36 1.5E-40 340.1 16.6 254 610-879 26-307 (367)
195 3lij_A Calcium/calmodulin depe 100.0 1.4E-35 4.9E-40 349.2 21.4 251 607-879 35-291 (494)
196 3n9x_A Phosphotransferase; mal 100.0 1.7E-35 5.9E-40 342.6 21.6 197 610-813 27-253 (432)
197 3c4z_A Rhodopsin kinase; Ser/T 100.0 9.4E-36 3.2E-40 352.0 19.7 246 611-874 187-438 (543)
198 3byv_A Rhoptry kinase; malaria 100.0 3.4E-37 1.2E-41 350.3 7.1 245 610-884 74-366 (377)
199 2y7j_A Phosphorylase B kinase 100.0 1.2E-35 4.1E-40 336.2 19.6 250 609-879 94-359 (365)
200 3fme_A Dual specificity mitoge 100.0 4E-36 1.4E-40 327.7 15.0 251 609-879 7-266 (290)
201 2ycf_A Serine/threonine-protei 100.0 9.9E-36 3.4E-40 330.5 18.5 255 604-879 5-274 (322)
202 2r3i_A Cell division protein k 100.0 1.1E-35 3.9E-40 325.7 18.4 258 611-879 5-283 (299)
203 2wtk_C Serine/threonine-protei 100.0 2.2E-35 7.6E-40 324.4 20.7 249 610-880 6-264 (305)
204 2vwi_A Serine/threonine-protei 100.0 1.9E-36 6.4E-41 332.2 12.1 257 609-879 15-287 (303)
205 3mwu_A Calmodulin-domain prote 100.0 8.1E-36 2.8E-40 350.7 18.3 251 607-879 20-276 (486)
206 2j0j_A Focal adhesion kinase 1 100.0 6.2E-36 2.1E-40 363.1 17.6 261 606-888 387-653 (656)
207 3q60_A ROP5B; pseudokinase, tr 100.0 2.6E-36 8.8E-41 342.3 13.1 251 611-879 64-352 (371)
208 4e7w_A Glycogen synthase kinas 100.0 5.9E-36 2E-40 342.3 16.1 258 610-879 41-321 (394)
209 1z57_A Dual specificity protei 100.0 9.2E-36 3.1E-40 331.7 17.1 264 606-879 11-328 (339)
210 3nyv_A Calmodulin-domain prote 100.0 1.3E-35 4.6E-40 348.6 19.3 252 606-879 23-281 (484)
211 3pfq_A PKC-B, PKC-beta, protei 100.0 1E-35 3.6E-40 362.3 18.5 246 609-878 341-596 (674)
212 3eb0_A Putative uncharacterize 100.0 5.3E-36 1.8E-40 341.3 14.9 258 609-879 7-321 (383)
213 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.7E-36 2.3E-40 330.7 15.1 258 608-888 32-304 (319)
214 3qyz_A Mitogen-activated prote 100.0 3.9E-35 1.3E-39 331.7 21.6 259 610-879 28-313 (364)
215 1blx_A Cyclin-dependent kinase 100.0 1.8E-35 6E-40 328.4 18.0 260 610-879 12-296 (326)
216 1zy4_A Serine/threonine-protei 100.0 3.7E-35 1.3E-39 321.4 20.3 250 609-879 6-283 (303)
217 3pg1_A Mitogen-activated prote 100.0 6.1E-36 2.1E-40 337.6 14.4 260 609-879 22-316 (362)
218 2i6l_A Mitogen-activated prote 100.0 1E-35 3.5E-40 328.8 15.9 259 610-879 12-305 (320)
219 3q5i_A Protein kinase; CDPK, m 100.0 3E-35 1E-39 347.4 20.8 249 609-879 36-301 (504)
220 3kvw_A DYRK2, dual specificity 100.0 2.6E-35 8.9E-40 340.7 19.5 199 608-816 96-303 (429)
221 3an0_A Dual specificity mitoge 100.0 1.5E-35 5.2E-40 331.4 17.0 252 609-879 51-310 (340)
222 2x7f_A TRAF2 and NCK-interacti 100.0 2.6E-35 8.9E-40 327.2 18.7 249 610-879 25-286 (326)
223 1phk_A Phosphorylase kinase; g 100.0 2.8E-35 9.4E-40 322.5 18.6 249 610-879 18-283 (298)
224 2xrw_A Mitogen-activated prote 100.0 4.1E-35 1.4E-39 332.5 20.6 259 610-879 26-318 (371)
225 1j1b_A Glycogen synthase kinas 100.0 6.1E-36 2.1E-40 345.1 13.8 258 610-879 55-336 (420)
226 2fst_X Mitogen-activated prote 100.0 1E-35 3.6E-40 336.9 14.4 255 609-879 29-311 (367)
227 2pml_X PFPK7, Ser/Thr protein 100.0 2.5E-35 8.5E-40 330.5 17.0 258 609-879 31-322 (348)
228 3rgf_A Cyclin-dependent kinase 100.0 5.4E-35 1.8E-39 335.5 19.8 201 610-816 21-240 (405)
229 3cek_A Dual specificity protei 100.0 6E-35 2.1E-39 322.7 19.3 251 607-879 26-292 (313)
230 3e3p_A Protein kinase, putativ 100.0 1.4E-35 4.7E-40 334.2 14.4 263 607-879 21-314 (360)
231 2vx3_A Dual specificity tyrosi 100.0 1.2E-34 4E-39 330.0 21.6 200 609-816 54-262 (382)
232 1q8y_A SR protein kinase; tran 100.0 8.3E-35 2.8E-39 329.2 20.2 262 608-879 18-333 (373)
233 2eu9_A Dual specificity protei 100.0 4.8E-35 1.6E-39 328.3 17.4 263 604-879 14-333 (355)
234 2b9h_A MAP kinase FUS3, mitoge 100.0 2.8E-35 9.7E-40 330.7 15.2 258 610-879 12-305 (353)
235 2wei_A Calmodulin-domain prote 100.0 1.6E-34 5.3E-39 315.3 19.9 254 604-879 17-276 (287)
236 4exu_A Mitogen-activated prote 100.0 8.8E-35 3E-39 329.8 17.9 254 609-879 42-323 (371)
237 3coi_A Mitogen-activated prote 100.0 6.6E-35 2.2E-39 328.3 16.1 253 610-879 25-305 (353)
238 3aln_A Dual specificity mitoge 100.0 6.1E-35 2.1E-39 324.7 15.2 253 610-879 23-285 (327)
239 2rio_A Serine/threonine-protei 100.0 1.7E-34 5.9E-39 334.4 17.7 247 614-879 20-295 (434)
240 3fhr_A MAP kinase-activated pr 100.0 2.2E-34 7.6E-39 322.0 17.8 250 610-879 29-287 (336)
241 2iwi_A Serine/threonine-protei 100.0 6.7E-35 2.3E-39 322.0 12.5 244 604-879 26-283 (312)
242 2dyl_A Dual specificity mitoge 100.0 4.5E-34 1.5E-38 315.7 17.8 249 610-879 26-283 (318)
243 3qa8_A MGC80376 protein; kinas 100.0 1.5E-34 5.1E-39 346.0 14.8 269 609-887 14-310 (676)
244 3a99_A Proto-oncogene serine/t 100.0 8.5E-35 2.9E-39 323.0 11.8 240 608-879 42-293 (320)
245 3p23_A Serine/threonine-protei 100.0 6E-34 2E-38 329.4 16.5 247 610-879 25-283 (432)
246 3uqc_A Probable conserved tran 100.0 5.1E-33 1.7E-37 303.9 19.4 237 606-889 28-268 (286)
247 2pzi_A Probable serine/threoni 100.0 8.9E-34 3E-38 346.8 13.3 242 606-885 77-327 (681)
248 3m2w_A MAP kinase-activated pr 100.0 4.7E-32 1.6E-36 297.7 19.6 224 611-879 19-256 (299)
249 3dzo_A Rhoptry kinase domain; 100.0 1.7E-32 5.8E-37 315.6 15.5 237 612-878 81-362 (413)
250 2vuw_A Serine/threonine-protei 100.0 3.7E-33 1.3E-37 311.8 8.6 243 606-878 17-329 (336)
251 4azs_A Methyltransferase WBDD; 99.9 3.5E-27 1.2E-31 281.3 5.7 186 615-811 240-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 6.4E-24 2.2E-28 251.8 8.3 183 614-813 341-539 (540)
253 1zar_A RIO2 kinase; serine kin 99.8 2.8E-21 9.6E-26 210.3 7.2 141 613-785 94-252 (282)
254 1zth_A RIO1 serine protein kin 99.7 1.6E-17 5.4E-22 178.2 9.6 135 612-761 50-219 (258)
255 1ogq_A PGIP-2, polygalacturona 99.7 3.9E-17 1.3E-21 180.2 9.8 150 369-518 3-161 (313)
256 4ecn_A Leucine-rich repeat pro 99.6 3.1E-16 1E-20 194.6 11.6 166 347-517 241-526 (876)
257 4eco_A Uncharacterized protein 99.6 1.3E-15 4.6E-20 184.4 9.7 146 368-517 26-284 (636)
258 4gyi_A RIO2 kinase; protein ki 99.5 1.9E-14 6.4E-19 161.2 10.1 137 611-761 97-265 (397)
259 2wfh_A SLIT homolog 2 protein 99.5 2.9E-14 9.8E-19 145.8 9.8 121 400-522 10-142 (193)
260 3rgz_A Protein brassinosteroid 99.5 9.7E-15 3.3E-19 180.8 5.3 111 412-522 631-743 (768)
261 1w8a_A SLIT protein; signaling 99.5 5.4E-14 1.8E-18 143.6 8.8 123 400-522 8-142 (192)
262 2o6r_A Variable lymphocyte rec 99.4 2.3E-13 8E-18 136.6 10.1 126 395-522 3-140 (177)
263 3rgz_A Protein brassinosteroid 99.4 2.1E-13 7E-18 168.9 8.5 130 368-502 8-144 (768)
264 3e6j_A Variable lymphocyte rec 99.4 5.5E-13 1.9E-17 140.0 10.4 122 392-517 14-146 (229)
265 2v70_A SLIT-2, SLIT homolog 2 99.4 4.3E-13 1.5E-17 139.9 9.2 111 412-522 56-169 (220)
266 4fcg_A Uncharacterized protein 99.4 1.2E-13 4.1E-18 153.3 3.5 146 368-517 23-194 (328)
267 2v9t_B SLIT homolog 2 protein 99.4 8.7E-13 3E-17 137.6 9.8 110 412-522 55-168 (220)
268 3g39_A Variable lymphocyte rec 99.3 1.7E-12 5.7E-17 129.8 8.8 103 416-522 12-118 (170)
269 2r9u_A Variable lymphocyte rec 99.3 2.9E-12 9.9E-17 128.6 9.6 103 416-522 15-121 (174)
270 3e6j_A Variable lymphocyte rec 99.3 2.9E-12 1E-16 134.5 9.7 109 412-522 63-175 (229)
271 2o6s_A Variable lymphocyte rec 99.3 4.9E-12 1.7E-16 130.3 9.9 122 395-518 3-136 (208)
272 1ogq_A PGIP-2, polygalacturona 99.3 6E-13 2.1E-17 146.6 2.4 109 414-522 198-307 (313)
273 2jwp_A Malectin, MGC80075; sug 99.3 1.9E-11 6.4E-16 122.5 13.0 141 25-171 7-171 (174)
274 3g39_A Variable lymphocyte rec 99.3 3.6E-12 1.2E-16 127.3 7.7 102 400-501 9-119 (170)
275 2v9t_B SLIT homolog 2 protein 99.3 4.9E-12 1.7E-16 131.9 8.9 119 400-519 11-141 (220)
276 1p9a_G Platelet glycoprotein I 99.3 8.5E-12 2.9E-16 135.9 10.1 110 412-522 99-211 (290)
277 2v70_A SLIT-2, SLIT homolog 2 99.3 7.1E-12 2.4E-16 130.7 8.3 123 396-519 8-142 (220)
278 2ifg_A High affinity nerve gro 99.2 4.3E-12 1.5E-16 141.5 7.0 102 418-522 13-119 (347)
279 3m19_A Variable lymphocyte rec 99.2 1.5E-11 5.1E-16 130.8 10.2 109 412-521 82-194 (251)
280 2o6s_A Variable lymphocyte rec 99.2 2.4E-11 8.1E-16 125.2 10.1 109 412-521 51-163 (208)
281 1w8a_A SLIT protein; signaling 99.2 8.5E-12 2.9E-16 127.2 6.2 91 412-502 53-144 (192)
282 3rfs_A Internalin B, repeat mo 99.2 3.3E-11 1.1E-15 129.8 10.6 111 412-522 108-221 (272)
283 2ell_A Acidic leucine-rich nuc 99.2 1E-11 3.5E-16 123.3 6.1 105 412-518 23-132 (168)
284 2je0_A Acidic leucine-rich nuc 99.2 7.9E-12 2.7E-16 121.6 4.4 104 413-518 17-125 (149)
285 4fcg_A Uncharacterized protein 99.2 1.8E-11 6E-16 135.8 7.8 107 412-519 182-290 (328)
286 2r9u_A Variable lymphocyte rec 99.2 3.2E-11 1.1E-15 120.9 8.9 90 412-502 32-122 (174)
287 3m19_A Variable lymphocyte rec 99.2 4E-11 1.4E-15 127.4 9.8 106 412-518 34-143 (251)
288 2o6q_A Variable lymphocyte rec 99.2 4.6E-11 1.6E-15 128.4 10.2 110 412-522 108-221 (270)
289 4g8a_A TOLL-like receptor 4; l 99.2 2.1E-11 7.2E-16 146.6 8.1 111 412-522 468-583 (635)
290 2z81_A CD282 antigen, TOLL-lik 99.2 2.6E-11 9E-16 143.7 7.9 117 400-517 4-134 (549)
291 2o6q_A Variable lymphocyte rec 99.2 4.7E-11 1.6E-15 128.3 9.0 127 391-518 6-145 (270)
292 4g8a_A TOLL-like receptor 4; l 99.1 2.5E-11 8.7E-16 145.9 7.4 106 412-518 51-160 (635)
293 3v47_A TOLL-like receptor 5B a 99.1 4.9E-11 1.7E-15 137.9 7.8 111 412-523 298-412 (455)
294 3oja_A Leucine-rich immune mol 99.1 7.4E-12 2.5E-16 146.6 -0.1 107 413-522 144-253 (487)
295 2z80_A TOLL-like receptor 2, v 99.1 6.6E-11 2.2E-15 132.3 7.5 116 399-517 29-160 (353)
296 2z66_A Variable lymphocyte rec 99.1 6.8E-11 2.3E-15 129.3 7.4 111 412-522 149-264 (306)
297 1ozn_A Reticulon 4 receptor; N 99.1 5.7E-11 2E-15 128.6 6.7 110 412-522 128-241 (285)
298 2xot_A Amphoterin-induced prot 99.1 8.5E-11 2.9E-15 132.0 8.3 120 400-519 18-149 (361)
299 3v47_A TOLL-like receptor 5B a 99.1 4E-11 1.4E-15 138.6 5.5 108 412-519 29-142 (455)
300 3zyj_A Leucine-rich repeat-con 99.1 8.8E-11 3E-15 135.5 7.9 108 412-522 184-295 (440)
301 3tm0_A Aminoglycoside 3'-phosp 99.1 2.8E-10 9.7E-15 121.5 11.1 140 611-759 16-212 (263)
302 1p9a_G Platelet glycoprotein I 99.1 2E-10 6.7E-15 125.0 9.8 107 411-519 75-185 (290)
303 2ifg_A High affinity nerve gro 99.1 1.1E-10 3.9E-15 130.0 8.1 103 396-499 4-118 (347)
304 4eco_A Uncharacterized protein 99.1 1.7E-10 5.9E-15 139.6 9.4 107 413-521 488-602 (636)
305 3vq2_A TLR4, TOLL-like recepto 99.1 7.5E-11 2.5E-15 141.6 6.1 110 412-522 447-561 (606)
306 2xwt_C Thyrotropin receptor; s 99.1 8.3E-11 2.8E-15 123.9 5.6 125 392-518 3-142 (239)
307 2xot_A Amphoterin-induced prot 99.1 1.5E-10 5E-15 130.1 8.0 107 413-521 88-204 (361)
308 4b8c_D Glucose-repressible alc 99.1 1.5E-10 5.1E-15 141.9 8.3 105 412-519 223-329 (727)
309 2z62_A TOLL-like receptor 4, v 99.0 1.8E-10 6.1E-15 124.0 7.9 107 412-518 27-136 (276)
310 3rfs_A Internalin B, repeat mo 99.0 3.3E-10 1.1E-14 121.8 9.9 107 412-519 84-194 (272)
311 1dce_A Protein (RAB geranylger 99.0 1.6E-10 5.4E-15 137.5 7.8 101 414-518 442-545 (567)
312 3zyi_A Leucine-rich repeat-con 99.0 1.5E-10 5.1E-15 134.1 7.1 108 412-522 195-306 (452)
313 3zyi_A Leucine-rich repeat-con 99.0 2.5E-10 8.7E-15 132.1 8.6 116 402-518 56-183 (452)
314 2o6r_A Variable lymphocyte rec 99.0 2.7E-10 9.2E-15 114.1 7.0 90 412-501 51-141 (177)
315 3vq2_A TLR4, TOLL-like recepto 99.0 3.5E-10 1.2E-14 135.8 9.3 107 412-518 31-140 (606)
316 4ecn_A Leucine-rich repeat pro 99.0 3.4E-10 1.2E-14 140.6 9.3 105 414-520 729-841 (876)
317 2id5_A Lingo-1, leucine rich r 99.0 4.1E-10 1.4E-14 131.1 9.1 119 401-519 12-141 (477)
318 1xku_A Decorin; proteoglycan, 99.0 4.2E-10 1.4E-14 124.4 8.7 106 413-520 192-307 (330)
319 2wfh_A SLIT homolog 2 protein 99.0 3.4E-10 1.2E-14 115.4 6.9 88 412-499 53-141 (193)
320 1ozn_A Reticulon 4 receptor; N 99.0 7.4E-10 2.5E-14 119.8 9.6 107 412-518 31-141 (285)
321 4ezg_A Putative uncharacterize 99.0 3.1E-10 1.1E-14 115.9 6.2 105 412-518 87-193 (197)
322 3o6n_A APL1; leucine-rich repe 99.0 1.7E-10 5.9E-15 130.7 4.7 108 412-521 247-354 (390)
323 3oja_A Leucine-rich immune mol 99.0 2.3E-10 7.8E-15 133.9 5.7 113 402-519 111-227 (487)
324 3t6q_A CD180 antigen; protein- 99.0 4.2E-10 1.4E-14 135.1 8.1 129 391-519 2-142 (606)
325 1nd4_A Aminoglycoside 3'-phosp 99.0 9.5E-10 3.3E-14 116.6 10.0 130 616-759 26-213 (264)
326 1a9n_A U2A', U2A'; complex (nu 99.0 3.2E-10 1.1E-14 113.5 5.8 102 413-519 19-126 (176)
327 1dce_A Protein (RAB geranylger 99.0 3.1E-10 1E-14 135.1 6.6 88 412-501 462-550 (567)
328 3j0a_A TOLL-like receptor 5; m 99.0 5E-10 1.7E-14 140.0 8.0 107 412-518 23-135 (844)
329 3oja_B Anopheles plasmodium-re 99.0 2.2E-10 7.7E-15 137.5 4.7 108 412-521 253-360 (597)
330 2z63_A TOLL-like receptor 4, v 99.0 4.8E-10 1.7E-14 133.3 7.3 111 412-522 420-534 (570)
331 1a9n_A U2A', U2A'; complex (nu 98.9 2E-10 7E-15 115.0 3.2 101 413-517 42-151 (176)
332 2z62_A TOLL-like receptor 4, v 98.9 9.3E-10 3.2E-14 118.4 8.5 105 413-517 52-160 (276)
333 3j0a_A TOLL-like receptor 5; m 98.9 2.5E-10 8.6E-15 142.7 4.5 107 412-521 450-562 (844)
334 4b8c_D Glucose-repressible alc 98.9 2.3E-10 7.9E-15 140.3 3.9 93 412-506 246-338 (727)
335 2id5_A Lingo-1, leucine rich r 98.9 4.3E-10 1.5E-14 130.9 6.0 108 413-522 224-336 (477)
336 2ft3_A Biglycan; proteoglycan, 98.9 6.1E-10 2.1E-14 123.3 6.8 106 413-520 193-308 (332)
337 1wwl_A Monocyte differentiatio 98.9 2.3E-10 7.8E-15 125.8 3.3 106 413-518 95-213 (312)
338 3zyj_A Leucine-rich repeat-con 98.9 1.1E-09 3.9E-14 126.2 8.9 116 402-518 45-172 (440)
339 3t6q_A CD180 antigen; protein- 98.9 5.8E-10 2E-14 133.8 6.6 110 412-522 448-563 (606)
340 2ft3_A Biglycan; proteoglycan, 98.9 1.1E-09 3.8E-14 121.1 8.4 115 400-518 33-159 (332)
341 3o53_A Protein LRIM1, AGAP0063 98.9 5.3E-10 1.8E-14 123.1 5.7 106 413-521 144-252 (317)
342 2ell_A Acidic leucine-rich nuc 98.9 6E-10 2.1E-14 110.5 5.0 87 414-501 72-163 (168)
343 3a79_B TLR6, VLRB.59, TOLL-lik 98.9 1.2E-09 4.2E-14 130.0 8.4 104 412-518 51-158 (562)
344 3a79_B TLR6, VLRB.59, TOLL-lik 98.9 1.4E-09 4.7E-14 129.5 8.5 106 413-522 403-513 (562)
345 2z66_A Variable lymphocyte rec 98.9 1.2E-09 4.1E-14 119.3 6.8 108 412-519 125-236 (306)
346 1xku_A Decorin; proteoglycan, 98.9 2.2E-09 7.5E-14 118.6 8.9 115 400-518 31-157 (330)
347 2je0_A Acidic leucine-rich nuc 98.9 4.3E-10 1.5E-14 109.1 2.8 88 412-502 41-130 (149)
348 3oja_B Anopheles plasmodium-re 98.9 2.3E-09 7.7E-14 128.7 9.6 106 412-518 98-204 (597)
349 1ziw_A TOLL-like receptor 3; i 98.9 2.5E-09 8.5E-14 130.2 9.3 106 412-517 24-132 (680)
350 4ezg_A Putative uncharacterize 98.9 1.2E-09 4.1E-14 111.5 5.3 80 414-495 67-147 (197)
351 3o6n_A APL1; leucine-rich repe 98.9 4E-09 1.4E-13 119.4 9.7 106 412-518 92-198 (390)
352 4glp_A Monocyte differentiatio 98.9 8.4E-10 2.9E-14 121.0 3.9 106 412-518 168-284 (310)
353 2z7x_B TOLL-like receptor 1, v 98.8 1.2E-09 4.2E-14 128.5 5.3 107 412-518 323-433 (520)
354 2z7x_B TOLL-like receptor 1, v 98.8 9.9E-10 3.4E-14 129.3 4.5 103 413-518 21-127 (520)
355 2z81_A CD282 antigen, TOLL-lik 98.8 2.2E-09 7.5E-14 127.1 6.6 106 413-518 50-160 (549)
356 4ay9_X Follicle-stimulating ho 98.8 4E-09 1.4E-13 117.8 7.9 105 398-504 7-123 (350)
357 1ziw_A TOLL-like receptor 3; i 98.8 4.8E-09 1.6E-13 127.7 8.5 106 413-518 73-183 (680)
358 2xwt_C Thyrotropin receptor; s 98.8 2.7E-09 9.1E-14 112.2 5.4 103 413-517 80-190 (239)
359 2z63_A TOLL-like receptor 4, v 98.8 6.3E-09 2.1E-13 123.6 8.6 107 412-518 75-189 (570)
360 2z80_A TOLL-like receptor 2, v 98.8 4.6E-09 1.6E-13 117.3 6.8 105 412-518 75-186 (353)
361 3cvr_A Invasion plasmid antige 98.8 2.6E-09 8.9E-14 126.7 5.0 102 401-517 49-151 (571)
362 4glp_A Monocyte differentiatio 98.8 2.7E-09 9.1E-14 117.0 4.6 84 414-497 92-182 (310)
363 1wwl_A Monocyte differentiatio 98.8 4.5E-09 1.5E-13 115.3 6.3 102 413-519 201-309 (312)
364 3dxp_A Putative acyl-COA dehyd 98.8 1.3E-08 4.6E-13 113.8 10.0 141 614-760 43-248 (359)
365 1h6t_A Internalin B; cell adhe 98.7 8.2E-09 2.8E-13 112.2 6.7 101 412-519 111-213 (291)
366 1xeu_A Internalin C; cellular 98.7 1.7E-08 5.8E-13 108.0 8.3 100 413-519 63-163 (263)
367 1h6u_A Internalin H; cell adhe 98.7 7.7E-09 2.6E-13 113.3 5.3 103 412-519 128-230 (308)
368 4fmz_A Internalin; leucine ric 98.7 7.5E-09 2.6E-13 115.0 5.2 104 412-518 242-345 (347)
369 1h6u_A Internalin H; cell adhe 98.7 1.7E-08 5.9E-13 110.5 7.7 102 412-519 106-208 (308)
370 1h6t_A Internalin B; cell adhe 98.7 1.9E-08 6.4E-13 109.3 7.6 102 412-518 89-190 (291)
371 1ds9_A Outer arm dynein; leuci 98.7 3.5E-10 1.2E-14 115.6 -6.5 103 412-519 47-153 (198)
372 1m9s_A Internalin B; cell inva 98.7 2.1E-08 7.1E-13 120.1 7.9 102 412-519 108-210 (605)
373 1xeu_A Internalin C; cellular 98.7 2.5E-08 8.7E-13 106.6 7.7 100 412-519 40-141 (263)
374 3cvr_A Invasion plasmid antige 98.6 3.3E-08 1.1E-12 117.2 8.7 96 413-520 140-244 (571)
375 1ds9_A Outer arm dynein; leuci 98.6 4.7E-10 1.6E-14 114.6 -6.3 102 414-519 19-128 (198)
376 1m9s_A Internalin B; cell inva 98.6 2E-08 6.8E-13 120.3 6.9 80 413-497 131-210 (605)
377 3o53_A Protein LRIM1, AGAP0063 98.6 1.3E-08 4.4E-13 111.9 4.6 105 412-519 119-227 (317)
378 3sg8_A APH(2'')-ID; antibiotic 98.6 1.1E-08 3.9E-13 111.7 2.8 186 615-813 26-288 (304)
379 1o6v_A Internalin A; bacterial 98.6 3.4E-08 1.1E-12 114.7 5.8 102 413-519 287-388 (466)
380 3bz5_A Internalin-J, INLJ; leu 98.6 9.6E-08 3.3E-12 110.6 9.0 96 413-517 64-159 (457)
381 1o6v_A Internalin A; bacterial 98.5 5.8E-08 2E-12 112.7 6.7 80 413-497 265-344 (466)
382 3bz5_A Internalin-J, INLJ; leu 98.5 1E-07 3.6E-12 110.3 8.1 76 414-497 171-246 (457)
383 1jl5_A Outer protein YOPM; leu 98.5 1.7E-07 5.8E-12 108.4 9.4 97 413-518 131-227 (454)
384 4fmz_A Internalin; leucine ric 98.5 7.5E-08 2.6E-12 106.8 6.0 103 412-519 220-324 (347)
385 1jl5_A Outer protein YOPM; leu 98.5 9.7E-08 3.3E-12 110.5 6.0 85 413-504 317-418 (454)
386 2jwp_A Malectin, MGC80075; sug 98.5 2.4E-07 8.2E-12 92.5 7.7 152 189-361 7-170 (174)
387 3g06_A SSPH2 (leucine-rich rep 98.4 3E-07 1E-11 110.3 8.7 94 414-519 202-297 (622)
388 2ca6_A RAN GTPase-activating p 98.4 1.6E-08 5.4E-13 114.3 -2.9 105 414-518 188-315 (386)
389 3g06_A SSPH2 (leucine-rich rep 98.4 1.2E-07 4.1E-12 113.7 4.4 85 413-505 221-305 (622)
390 2ca6_A RAN GTPase-activating p 98.4 2E-08 6.8E-13 113.5 -2.6 107 413-519 159-287 (386)
391 3goz_A Leucine-rich repeat-con 98.3 7.2E-08 2.4E-12 108.0 -0.2 105 413-517 22-149 (362)
392 3rw6_A Nuclear RNA export fact 98.3 1.8E-07 6.3E-12 99.7 2.6 65 435-501 168-237 (267)
393 3d1u_A Putative fructosamine-3 98.3 3.6E-06 1.2E-10 91.1 11.9 140 614-759 20-215 (288)
394 2ast_B S-phase kinase-associat 98.2 5.2E-08 1.8E-12 107.5 -3.0 103 413-516 70-178 (336)
395 3r70_A Aminoglycoside phosphot 98.2 2.6E-06 8.8E-11 93.7 10.3 132 614-760 42-237 (320)
396 4gkh_A Aminoglycoside 3'-phosp 98.2 6.1E-06 2.1E-10 87.9 11.9 134 616-759 31-222 (272)
397 2ast_B S-phase kinase-associat 98.1 2.2E-07 7.4E-12 102.5 -0.8 112 401-518 38-154 (336)
398 3tdw_A Gentamicin resistance p 98.1 1.3E-05 4.4E-10 87.5 11.9 135 615-760 25-224 (306)
399 3goz_A Leucine-rich repeat-con 98.1 3.5E-07 1.2E-11 102.4 -0.7 102 417-518 2-121 (362)
400 3rw6_A Nuclear RNA export fact 98.1 4.1E-07 1.4E-11 97.0 -0.3 79 412-491 169-258 (267)
401 4ay9_X Follicle-stimulating ho 98.1 5.2E-06 1.8E-10 92.3 8.5 58 415-473 156-215 (350)
402 3ats_A Putative uncharacterize 97.9 1.7E-05 5.9E-10 88.2 9.3 79 615-693 26-121 (357)
403 3ovc_A Hygromycin-B 4-O-kinase 97.9 3.5E-05 1.2E-09 86.1 10.9 73 614-692 46-121 (362)
404 1z7x_W Ribonuclease inhibitor; 97.8 4E-07 1.4E-11 105.0 -6.8 105 413-517 256-381 (461)
405 1z7x_W Ribonuclease inhibitor; 97.8 1E-06 3.6E-11 101.4 -4.4 106 413-518 284-410 (461)
406 3sb4_A Hypothetical leucine ri 97.6 2.9E-05 1E-09 85.4 5.0 91 413-507 226-319 (329)
407 2q83_A YTAA protein; 2635576, 97.6 8.6E-05 2.9E-09 81.6 8.6 140 615-759 38-251 (346)
408 2olc_A MTR kinase, methylthior 97.6 0.00014 4.8E-09 82.1 10.0 75 614-690 35-120 (397)
409 3un9_A NLR family member X1; l 97.5 4.5E-06 1.5E-10 93.8 -4.1 61 437-497 155-224 (372)
410 3un9_A NLR family member X1; l 97.5 5.3E-06 1.8E-10 93.2 -3.5 86 413-498 155-253 (372)
411 3f7w_A Putative fructosamine-3 97.4 0.00038 1.3E-08 74.8 10.0 74 614-691 20-96 (288)
412 3jr1_A Putative fructosamine-3 97.3 0.00063 2.1E-08 74.2 10.7 137 615-756 42-232 (312)
413 2pyw_A Uncharacterized protein 97.3 0.00027 9.1E-09 80.6 8.0 80 729-809 231-313 (420)
414 1io0_A Tropomodulin; LRR prote 97.2 1.4E-05 4.6E-10 80.5 -4.0 105 413-517 36-162 (185)
415 3sb4_A Hypothetical leucine ri 97.1 0.00021 7.1E-09 78.5 4.2 38 413-451 101-138 (329)
416 3ogk_B Coronatine-insensitive 97.1 3.2E-05 1.1E-09 92.0 -3.5 105 413-517 403-524 (592)
417 1io0_A Tropomodulin; LRR prote 96.9 4.6E-05 1.6E-09 76.6 -3.7 85 413-497 65-164 (185)
418 3ogk_B Coronatine-insensitive 96.8 0.00032 1.1E-08 83.3 1.8 55 414-468 193-251 (592)
419 1nw1_A Choline kinase (49.2 KD 96.8 0.0026 8.7E-08 72.6 8.8 70 615-690 79-157 (429)
420 2p1m_B Transport inhibitor res 96.7 0.00015 5.1E-09 86.1 -1.7 102 413-516 105-221 (594)
421 3dxq_A Choline/ethanolamine ki 96.7 0.0035 1.2E-07 67.6 8.9 138 614-760 23-202 (301)
422 3csv_A Aminoglycoside phosphot 96.6 0.0091 3.1E-07 65.3 11.5 141 615-760 24-217 (333)
423 2p1m_B Transport inhibitor res 96.6 0.00011 3.9E-09 87.1 -4.4 105 413-518 397-518 (594)
424 2ppq_A HSK, HK, homoserine kin 96.5 0.0095 3.3E-07 64.7 11.1 142 615-759 28-216 (322)
425 3feg_A Choline/ethanolamine ki 96.4 0.0089 3E-07 66.9 9.9 141 615-760 56-254 (379)
426 3rfe_A Platelet glycoprotein I 96.4 0.0033 1.1E-07 59.1 5.5 55 417-473 12-68 (130)
427 1zyl_A Hypothetical protein YI 96.4 0.013 4.4E-07 63.8 11.1 141 616-760 33-223 (328)
428 3c5i_A Choline kinase; choline 96.2 0.0078 2.7E-07 67.0 8.2 72 615-691 39-120 (369)
429 3e4g_A ATP synthase subunit S, 96.2 0.00054 1.8E-08 67.9 -1.3 83 413-495 61-150 (176)
430 2qg7_A Ethanolamine kinase PV0 96.1 0.017 5.8E-07 66.3 10.5 72 615-691 114-187 (458)
431 2ra8_A Uncharacterized protein 96.0 0.00082 2.8E-08 74.9 -1.0 105 413-517 193-318 (362)
432 2ra8_A Uncharacterized protein 95.9 0.00053 1.8E-08 76.4 -3.1 103 412-517 171-290 (362)
433 3rfe_A Platelet glycoprotein I 95.8 0.0085 2.9E-07 56.2 5.1 47 441-490 12-61 (130)
434 3i1a_A Spectinomycin phosphotr 95.7 0.024 8E-07 62.4 9.0 68 618-692 32-108 (339)
435 3f2s_A CK, chetk-alpha, cholin 95.2 0.052 1.8E-06 61.0 9.8 141 615-759 58-279 (401)
436 4fdw_A Leucine rich hypothetic 95.0 0.018 6.1E-07 65.0 5.4 99 414-517 249-356 (401)
437 4fdw_A Leucine rich hypothetic 94.9 0.027 9.2E-07 63.5 6.3 89 413-506 271-366 (401)
438 2yle_A Protein spire homolog 1 94.9 0.19 6.6E-06 51.0 11.7 105 690-813 33-137 (229)
439 3mes_A Choline kinase; malaria 94.0 0.17 5.7E-06 57.3 10.3 140 615-760 76-291 (424)
440 1pgv_A TMD-1, tropomodulin TMD 91.9 0.018 6.3E-07 57.9 -1.5 83 413-495 41-137 (197)
441 4h09_A Hypothetical leucine ri 89.1 0.35 1.2E-05 53.4 5.6 88 414-506 264-353 (379)
442 3g15_A CK, chetk-alpha, cholin 88.0 1.2 4.1E-05 49.8 9.1 30 731-760 245-280 (401)
443 4gt6_A Cell surface protein; l 87.9 0.74 2.5E-05 51.2 7.2 96 414-515 266-366 (394)
444 3e4g_A ATP synthase subunit S, 87.7 0.081 2.8E-06 52.2 -0.8 92 428-519 52-152 (176)
445 4fs7_A Uncharacterized protein 86.9 0.5 1.7E-05 52.6 5.0 77 414-494 298-376 (394)
446 4h09_A Hypothetical leucine ri 85.3 0.83 2.8E-05 50.4 5.8 88 414-506 241-330 (379)
447 4gt6_A Cell surface protein; l 85.2 0.74 2.5E-05 51.2 5.4 80 413-496 288-369 (394)
448 1pgv_A TMD-1, tropomodulin TMD 83.8 0.071 2.4E-06 53.6 -3.4 83 413-495 70-168 (197)
449 4fs7_A Uncharacterized protein 77.9 1.1 3.8E-05 49.7 3.3 73 413-489 320-393 (394)
450 3cxl_A N-chimerin; SH2, RHO-GA 73.9 0.41 1.4E-05 54.8 -1.8 60 613-675 146-214 (463)
451 4ann_A ESSB; membrane protein, 73.6 11 0.00037 38.0 8.8 115 663-813 43-158 (215)
452 4ano_A ESSB; membrane protein, 63.6 15 0.00051 37.1 7.4 114 663-813 48-163 (219)
453 2jwa_A Receptor tyrosine-prote 61.0 1.2 4.2E-05 32.7 -0.8 23 530-552 12-34 (44)
454 2ks1_B Epidermal growth factor 60.3 2 6.7E-05 31.7 0.2 6 539-544 21-26 (44)
455 2l2t_A Receptor tyrosine-prote 52.8 2.6 8.9E-05 31.0 -0.3 6 539-544 20-25 (44)
456 2k1k_A Ephrin type-A receptor 40.4 5.9 0.0002 28.2 0.0 25 530-554 11-35 (38)
457 2w3j_A Carbohydrate binding mo 34.4 2.6E+02 0.0088 25.8 10.5 91 80-175 38-133 (145)
458 1nrp_R Receptor based peptide 25.4 24 0.00081 21.7 0.9 16 200-215 6-21 (26)
459 1nro_R Receptor based peptide 23.6 29 0.00099 21.5 1.0 17 200-216 6-22 (27)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=9.8e-50 Score=443.44 Aligned_cols=259 Identities=26% Similarity=0.429 Sum_probs=207.5
Q ss_pred HHhhccccCccCcEEEEEEEEC------CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 683 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~------~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV 683 (931)
...+.++||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..++|
T Consensus 42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 121 (329)
T 4aoj_A 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMV 121 (329)
T ss_dssp GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 3456789999999999999875 4788999999876666678899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCC------------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceE
Q 002358 684 YEYMHNGTLRDRLHGSV------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAK 751 (931)
Q Consensus 684 ~E~~~~gsL~~~L~~~~------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vk 751 (931)
||||++|+|.++++... ...+++|.+++.|+.|||+||+|||+ ++|+||||||+||||++++.+|
T Consensus 122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~K 198 (329)
T 4aoj_A 122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVK 198 (329)
T ss_dssp EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEE
T ss_pred EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcEE
Confidence 99999999999997542 23469999999999999999999998 8999999999999999999999
Q ss_pred Eecccccccccccc-cccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHH
Q 002358 752 VSDFGLSRQAEEDL-THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARS 829 (931)
Q Consensus 752 L~DFGla~~~~~~~-~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~ 829 (931)
|+|||+++...... ........||+.|||||++.+..++.++|||||||+||||+| |+.||..... ..+...
T Consensus 199 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~---~~~~~~--- 272 (329)
T 4aoj_A 199 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN---TEAIDC--- 272 (329)
T ss_dssp ECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH---HHHHHH---
T ss_pred EcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH---HHHHHH---
Confidence 99999998754432 223344569999999999999999999999999999999999 8999974332 122222
Q ss_pred hhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 002358 830 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 887 (931)
Q Consensus 830 ~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 887 (931)
+..+...+ .+...+..+.+++.+||+.||++||||+||++.|+.+...
T Consensus 273 -i~~g~~~~---------~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 273 -ITQGRELE---------RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp -HHHTCCCC---------CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred -HHcCCCCC---------CcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 22222111 1122334688999999999999999999999999987653
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.6e-50 Score=442.16 Aligned_cols=261 Identities=28% Similarity=0.457 Sum_probs=214.9
Q ss_pred HHHHhhccccCccCcEEEEEEEEC------CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEE
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 681 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~------~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~ 681 (931)
...+.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 344567899999999999999875 47789999998776666788999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCC----------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceE
Q 002358 682 LVYEYMHNGTLRDRLHGSV----------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAK 751 (931)
Q Consensus 682 lV~E~~~~gsL~~~L~~~~----------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vk 751 (931)
+|||||++|+|.++|+... ....++|..++.++.|||+||+|||+ ++|+||||||+|||+++++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEE
Confidence 9999999999999997531 34579999999999999999999998 8999999999999999999999
Q ss_pred Eeccccccccccccc-ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHH
Q 002358 752 VSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARS 829 (931)
Q Consensus 752 L~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~ 829 (931)
|+|||+++....... .......||+.|||||++.+..|+.++|||||||++|||+| |+.||..... ..+..
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~---~~~~~---- 241 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN---NEVIE---- 241 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH---HHHHH----
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH---HHHHH----
Confidence 999999987544332 22334568999999999999999999999999999999999 8999974332 12222
Q ss_pred hhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 002358 830 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 887 (931)
Q Consensus 830 ~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 887 (931)
.+..+.... .+...+.++.+++.+||+.||++||||+||++.|+++.+.
T Consensus 242 ~i~~~~~~~---------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 242 CITQGRVLQ---------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp HHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCCC---------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 222232211 1222334688999999999999999999999999987654
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=4.1e-50 Score=442.36 Aligned_cols=263 Identities=24% Similarity=0.413 Sum_probs=215.0
Q ss_pred hhHHHHHHhhccccCccCcEEEEEEEEC------CCcEEEEEEccCccc-hhhhhHHHHHHHHHhcCCCCCcceeEEEec
Q 002358 604 PELEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEE 676 (931)
Q Consensus 604 ~~l~~~~~~~~~~LG~G~fG~Vy~a~~~------~g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~ 676 (931)
.|+...+.+|.++||+|+||+||+|++. +++.||||+++.... ...++|.+|+.++++++|||||+++|+|.+
T Consensus 21 ~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~ 100 (308)
T 4gt4_A 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK 100 (308)
T ss_dssp CBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE
Confidence 3445556778899999999999999874 467899999976533 345789999999999999999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHhccCC-------------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCcc
Q 002358 677 EHQRILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNIL 743 (931)
Q Consensus 677 ~~~~~lV~E~~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NIL 743 (931)
++..++|||||++|+|.++|.... ....++|..+++++.|||+||+|||+ ++|+||||||+|||
T Consensus 101 ~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NIL 177 (308)
T 4gt4_A 101 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVL 177 (308)
T ss_dssp SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceE
Confidence 999999999999999999996432 12468999999999999999999998 89999999999999
Q ss_pred ccCCCceEEecccccccccccc-cccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchh
Q 002358 744 LDINMRAKVSDFGLSRQAEEDL-THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAEL 821 (931)
Q Consensus 744 ld~~~~vkL~DFGla~~~~~~~-~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~ 821 (931)
|++++.+||+|||+++...... ........||+.|||||++.+..|+.++|||||||+||||+| |+.||..... .
T Consensus 178 l~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~---~ 254 (308)
T 4gt4_A 178 VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN---Q 254 (308)
T ss_dssp ECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH---H
T ss_pred ECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH---H
Confidence 9999999999999998764432 223345579999999999999999999999999999999999 8999974332 2
Q ss_pred hHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 002358 822 NIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSI 885 (931)
Q Consensus 822 ~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 885 (931)
.+.+ .+..+.... .+...+..+.+++.+||+.||++||||+||++.|+...
T Consensus 255 ~~~~----~i~~~~~~~---------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 255 DVVE----MIRNRQVLP---------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HHHH----HHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HHHH----HHHcCCCCC---------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 2222 233332221 12233446889999999999999999999999998653
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-48 Score=429.64 Aligned_cols=259 Identities=31% Similarity=0.497 Sum_probs=203.0
Q ss_pred HHHhhccccCccCcEEEEEEEECCCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEe
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
....+.++||+|+||+||+|++++ .||||+++... ....+.|.+|+++|++++|||||+++|++.+ +..++||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 344678999999999999999763 69999987432 3455789999999999999999999999865 568999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc-
Q 002358 687 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL- 765 (931)
Q Consensus 687 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~- 765 (931)
|++|+|.++|+.. ...+++..++.|+.|||+||+|||+ ++|+||||||+||||++++.+||+|||+|+......
T Consensus 113 ~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 187 (307)
T 3omv_A 113 CEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred CCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence 9999999999743 4569999999999999999999998 899999999999999999999999999998754322
Q ss_pred cccccccccCCCccCCCccCC---CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccc
Q 002358 766 THISSVARGTVGYLDPEYYGN---QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 842 (931)
Q Consensus 766 ~~~~~~~~gt~~y~APE~l~~---~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~ 842 (931)
........||+.|||||++.+ ..|+.++|||||||+||||+||+.||...... ..+ ...+..+.. .|
T Consensus 188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~--~~~----~~~~~~~~~----~p 257 (307)
T 3omv_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR--DQI----IFMVGRGYA----SP 257 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--HHH----HHHHHTTCC----CC
T ss_pred ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH--HHH----HHHHhcCCC----CC
Confidence 223344579999999999854 46899999999999999999999999743221 111 112222211 11
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 002358 843 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 886 (931)
Q Consensus 843 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 886 (931)
.+ ...+...+..+.+++.+||+.+|++||||+||++.|+.+..
T Consensus 258 ~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 258 DL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp CS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred Cc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 11 11222334578899999999999999999999999987754
No 5
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.1e-47 Score=423.47 Aligned_cols=260 Identities=23% Similarity=0.256 Sum_probs=209.1
Q ss_pred HhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEecCC
Q 002358 611 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 689 (931)
Q Consensus 611 ~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 689 (931)
+++.++||+|+||.||+|+++ +|+.||||+++... ...+|+.+|++++|||||++++++.+++..+||||||+|
T Consensus 60 ~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g 134 (336)
T 4g3f_A 60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG 134 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred eEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCC
Confidence 455788999999999999986 68999999997532 235799999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCC-ceEEecccccccccccccc-
Q 002358 690 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM-RAKVSDFGLSRQAEEDLTH- 767 (931)
Q Consensus 690 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~-~vkL~DFGla~~~~~~~~~- 767 (931)
|+|.++++. .+.+++..+..++.||+.||+|||+ ++|+||||||+||||+.++ .+||+|||+|+........
T Consensus 135 g~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 135 GSLGQLIKQ---MGCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp CBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 999999974 4579999999999999999999998 8999999999999999987 6999999999876543221
Q ss_pred ---cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccc
Q 002358 768 ---ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 844 (931)
Q Consensus 768 ---~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 844 (931)
.....+||+.|||||++.+..|+.++|||||||++|||++|+.||......... ..+ .. +... +
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~---~~i---~~-~~~~------~ 275 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLC---LKI---AS-EPPP------I 275 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCH---HHH---HH-SCCG------G
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH---HHH---Hc-CCCC------c
Confidence 123356999999999999999999999999999999999999999754433221 111 11 1110 0
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcCCCCcc
Q 002358 845 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGGDQKF 895 (931)
Q Consensus 845 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~ 895 (931)
...+......+.+++.+||+.||++|||++||++.|...+.....-..++
T Consensus 276 -~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw 325 (336)
T 4g3f_A 276 -REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPW 325 (336)
T ss_dssp -GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCS
T ss_pred -hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCC
Confidence 01122233467899999999999999999999999988876655444444
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.6e-47 Score=425.75 Aligned_cols=248 Identities=24% Similarity=0.348 Sum_probs=206.6
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEecC
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 688 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 688 (931)
.|++.++||+|+||+||+|+++ +|+.||||++........+.+.+|+++|++++|||||++++++.+++..+||||||+
T Consensus 75 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~ 154 (346)
T 4fih_A 75 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 154 (346)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred hcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 3666789999999999999987 699999999976555556778999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccccc
Q 002358 689 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 768 (931)
Q Consensus 689 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~~~ 768 (931)
+|+|.+++.. ..+++..+..++.||+.||+|||+ ++|+||||||+||||+.++.+||+|||+|+........
T Consensus 155 gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~- 226 (346)
T 4fih_A 155 GGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR- 226 (346)
T ss_dssp TEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC-
T ss_pred CCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCc-
Confidence 9999999973 458999999999999999999998 89999999999999999999999999999876544332
Q ss_pred ccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccCCC
Q 002358 769 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 848 (931)
Q Consensus 769 ~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~ 848 (931)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... .... .+..+.......
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~---~~~~----~i~~~~~~~~~~------- 292 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL---KAMK----MIRDNLPPRLKN------- 292 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHH----HHHHSSCCCCSC-------
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---HHHH----HHHcCCCCCCCc-------
Confidence 34457999999999999999999999999999999999999999743321 1111 122221111110
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 849 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 849 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.......+.+++.+||+.||++|||++|+++
T Consensus 293 ~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 293 LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1112236789999999999999999999875
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.7e-47 Score=424.56 Aligned_cols=249 Identities=27% Similarity=0.383 Sum_probs=201.2
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEe
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
.|++.+.||+|+||+||+|+++ +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+++..++||||
T Consensus 25 ~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy 104 (350)
T 4b9d_A 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDY 104 (350)
T ss_dssp CEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred ceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 4778899999999999999986 69999999996542 33457899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccc
Q 002358 687 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 766 (931)
Q Consensus 687 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~ 766 (931)
|+||+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+||||+.++.+||+|||+|+.......
T Consensus 105 ~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 180 (350)
T 4b9d_A 105 CEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180 (350)
T ss_dssp CTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH
T ss_pred CCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCCcc
Confidence 9999999999753 34567889999999999999999998 9999999999999999999999999999987654322
Q ss_pred ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccC
Q 002358 767 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 846 (931)
Q Consensus 767 ~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 846 (931)
.....+||+.|||||++.+..|+.++|||||||++|||++|+.||...+.. .+ +.+ +..+.... +..
T Consensus 181 -~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~---~~---~~~-i~~~~~~~-----~~~ 247 (350)
T 4b9d_A 181 -LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK---NL---VLK-IISGSFPP-----VSL 247 (350)
T ss_dssp -HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH---HH---HHH-HHHTCCCC-----CCT
T ss_pred -cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---HH---HHH-HHcCCCCC-----CCc
Confidence 223456999999999999999999999999999999999999999744321 11 111 22222211 111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 847 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 847 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.. ..++.+++.+||+.||++|||++|+++
T Consensus 248 ~~----s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 248 HY----SYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp TS----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cC----CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 22 236789999999999999999999975
No 8
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.2e-47 Score=418.62 Aligned_cols=268 Identities=26% Similarity=0.366 Sum_probs=201.5
Q ss_pred HhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCC----eEEEEEEe
Q 002358 611 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH----QRILVYEY 686 (931)
Q Consensus 611 ~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~----~~~lV~E~ 686 (931)
+.+.++||+|+||+||+|+++ |+.||||+++... .....+.+|+..+.+++|||||+++|+|.+.+ ..+|||||
T Consensus 5 i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey 82 (303)
T 3hmm_A 5 IVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred EEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence 456789999999999999985 8999999986432 22223344566667889999999999997653 57999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcC-----CCCeEecCCCCCCccccCCCceEEecccccccc
Q 002358 687 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC-----NPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 761 (931)
Q Consensus 687 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~-----~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~ 761 (931)
|++|+|.++++. ..++|..+++++.|+++||+|||+.+ .++|+||||||+||||+.++.+||+|||+++..
T Consensus 83 ~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 83 HEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp CTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 999999999974 45899999999999999999999731 249999999999999999999999999999876
Q ss_pred cccccc---cccccccCCCccCCCccCCC------CCCccchhHHHHHHHHHHHhCCCCCCccCccch--------hhHH
Q 002358 762 EEDLTH---ISSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE--------LNIV 824 (931)
Q Consensus 762 ~~~~~~---~~~~~~gt~~y~APE~l~~~------~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~--------~~l~ 824 (931)
...... ......||+.|||||++.+. .++.++|||||||+||||+||+.|+........ ....
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 543322 22335699999999998764 467899999999999999999887753222110 0011
Q ss_pred HHHHHhhhcCCeeecccccccCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 825 HWARSMIKKGDVISIVDPVLIGN-VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 825 ~~~~~~~~~~~~~~i~d~~l~~~-~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
+.+...+..+. .+|.+... ...+.+..+.+++.+||+.||++||||+||++.|+++...+
T Consensus 239 ~~~~~~~~~~~----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 239 EEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHHTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhccc----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 12222222111 12222211 13356678899999999999999999999999999886543
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-46 Score=410.23 Aligned_cols=244 Identities=29% Similarity=0.423 Sum_probs=196.2
Q ss_pred hhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEec----CCeEEEEE
Q 002358 612 NFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----EHQRILVY 684 (931)
Q Consensus 612 ~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~----~~~~~lV~ 684 (931)
++.++||+|+||+||+|.++ +++.||+|++.... ....+.|.+|+++|++++|||||++++++.+ +...++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45678999999999999987 58899999986532 3345679999999999999999999999865 35679999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCC--eEecCCCCCCccccC-CCceEEecccccccc
Q 002358 685 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDI-NMRAKVSDFGLSRQA 761 (931)
Q Consensus 685 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~--ivH~DIkp~NILld~-~~~vkL~DFGla~~~ 761 (931)
|||++|+|.+++.. ...+++..+..++.||++||+|||+ ++ |+||||||+||||+. ++.+||+|||+|+..
T Consensus 109 Ey~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp ECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred eCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 99999999999974 4678999999999999999999998 55 999999999999984 799999999999864
Q ss_pred cccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccc
Q 002358 762 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 841 (931)
Q Consensus 762 ~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d 841 (931)
... ......||+.|||||++.+ .|+.++|||||||++|||+||+.||..... ...+. ..+..+......+
T Consensus 183 ~~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~--~~~~~----~~i~~~~~~~~~~ 252 (290)
T 3fpq_A 183 RAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN--AAQIY----RRVTSGVKPASFD 252 (290)
T ss_dssp CTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--HHHHH----HHHTTTCCCGGGG
T ss_pred CCC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc--HHHHH----HHHHcCCCCCCCC
Confidence 332 2334579999999999875 599999999999999999999999963221 11121 2222222211111
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 842 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 842 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
+ ..+ .++.+++.+||+.||++|||++|+++
T Consensus 253 ~----~~~----~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 253 K----VAI----PEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp G----CCC----HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred c----cCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 112 25789999999999999999999875
No 10
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.6e-47 Score=427.37 Aligned_cols=266 Identities=26% Similarity=0.407 Sum_probs=215.2
Q ss_pred hHHHHHHhhccccCccCcEEEEEEEECC------CcEEEEEEccCccc-hhhhhHHHHHHHHHhcCC-CCCcceeEEEec
Q 002358 605 ELEEATNNFCKKIGKGSFGSVYYGKMKD------GKEVAVKIMADSCS-HRTQQFVTEVALLSRIHH-RNLVPLIGYCEE 676 (931)
Q Consensus 605 ~l~~~~~~~~~~LG~G~fG~Vy~a~~~~------g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H-pnIv~l~g~~~~ 676 (931)
|+....+++.+.||+|+||+||+|++.. ++.||||+++.... ...++|.+|+++|.+++| ||||+++|+|.+
T Consensus 60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~ 139 (353)
T 4ase_A 60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 139 (353)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence 3445667889999999999999998753 36899999976543 345789999999999965 899999999976
Q ss_pred C-CeEEEEEEecCCCCHHHHhccCC-------------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCc
Q 002358 677 E-HQRILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNI 742 (931)
Q Consensus 677 ~-~~~~lV~E~~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NI 742 (931)
. +..++|||||++|+|.++|+... ....+++..++.++.|||+||+|||+ ++|+||||||+||
T Consensus 140 ~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK~~NI 216 (353)
T 4ase_A 140 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNI 216 (353)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGE
T ss_pred cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccCccce
Confidence 4 56899999999999999997532 13458999999999999999999998 8999999999999
Q ss_pred cccCCCceEEecccccccccccccc-cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccch
Q 002358 743 LLDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAE 820 (931)
Q Consensus 743 Lld~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~ 820 (931)
|+++++.+||+|||+|+........ ......||+.|||||++.+..|+.++|||||||+||||+| |+.||.......
T Consensus 217 Ll~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~- 295 (353)
T 4ase_A 217 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE- 295 (353)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-
T ss_pred eeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH-
Confidence 9999999999999999876544332 3344568999999999999999999999999999999998 999997433221
Q ss_pred hhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 821 LNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 821 ~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
. +.+.+..+..... +.....++.+++.+||+.||++|||++||++.|+++++..
T Consensus 296 -~----~~~~i~~g~~~~~---------p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 296 -E----FCRRLKEGTRMRA---------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp -H----HHHHHHHTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred -H----HHHHHHcCCCCCC---------CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 1 2222333322111 1122336789999999999999999999999999887643
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.2e-46 Score=425.22 Aligned_cols=247 Identities=25% Similarity=0.365 Sum_probs=206.6
Q ss_pred HhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEecCC
Q 002358 611 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 689 (931)
Q Consensus 611 ~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 689 (931)
|++.++||+|+||.||+|+++ +|+.||||++........+.+.+|+++|++++|||||++++++.+++..|||||||+|
T Consensus 153 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~g 232 (423)
T 4fie_A 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 232 (423)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred cEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCC
Confidence 667789999999999999987 6899999999765555667899999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccccccc
Q 002358 690 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHIS 769 (931)
Q Consensus 690 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~~~~ 769 (931)
|+|.++++. ..+++..+..++.||+.||+|||+ ++|+||||||+||||+.++.+||+|||+|+.+...... .
T Consensus 233 G~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~-~ 304 (423)
T 4fie_A 233 GALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-R 304 (423)
T ss_dssp EEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC-B
T ss_pred CcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcc-c
Confidence 999999973 458999999999999999999998 89999999999999999999999999999876544332 3
Q ss_pred cccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccCCCC
Q 002358 770 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVK 849 (931)
Q Consensus 770 ~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 849 (931)
...+||+.|||||++.+..|+.++|||||||++|||++|+.||...... .... .+..+....+.. ....
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~---~~~~----~i~~~~~~~~~~---~~~~- 373 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL---KAMK----MIRDNLPPRLKN---LHKV- 373 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHH----HHHHSCCCCCSC---TTSS-
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---HHHH----HHHcCCCCCCcc---cccC-
Confidence 4457999999999999999999999999999999999999999743321 1111 122221111111 1112
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 850 IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 850 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
...+.+++.+||+.||++|||++|+++
T Consensus 374 ---s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 374 ---SPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp ---CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 236789999999999999999999875
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=7.5e-47 Score=414.27 Aligned_cols=246 Identities=24% Similarity=0.371 Sum_probs=205.9
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc---chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
.|++.+.||+|+||+||+|+.+ +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+++..++|||
T Consensus 33 dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmE 112 (311)
T 4aw0_A 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS 112 (311)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 4788999999999999999986 68999999996532 2334678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
||+||+|.+++.. .+.+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+......
T Consensus 113 y~~gG~L~~~i~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 113 YAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred cCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999999974 4679999999999999999999998 999999999999999999999999999998765432
Q ss_pred -cccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccc
Q 002358 766 -THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 844 (931)
Q Consensus 766 -~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 844 (931)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||...+.. .+.+ .+..+.. .+
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~---~~~~----~i~~~~~------~~ 253 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG---LIFA----KIIKLEY------DF 253 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHTCC------CC
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHH----HHHcCCC------CC
Confidence 22344567999999999999999999999999999999999999999744322 1211 1222221 11
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 002358 845 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIV 878 (931)
Q Consensus 845 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl 878 (931)
....+ .++.+++.+||+.||++|||++|++
T Consensus 254 p~~~s----~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 254 PEKFF----PKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CTTCC----HHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred CcccC----HHHHHHHHHHccCCHhHCcChHHHc
Confidence 11222 3578999999999999999999864
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.5e-46 Score=400.27 Aligned_cols=244 Identities=25% Similarity=0.386 Sum_probs=190.3
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc---chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
.|++.+.||+|+||+||+|+.+ +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+++..++|||
T Consensus 14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE 93 (275)
T 3hyh_A 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEe
Confidence 4778899999999999999876 69999999986542 2234679999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
|+ +|+|.+.+.. .+.+++..+..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+|+...+..
T Consensus 94 y~-~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 94 YA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp CC-CEEHHHHHHH---SCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred CC-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 99 6899999874 4679999999999999999999998 899999999999999999999999999998754332
Q ss_pred cccccccccCCCccCCCccCCCCC-CccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccc
Q 002358 766 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 844 (931)
Q Consensus 766 ~~~~~~~~gt~~y~APE~l~~~~~-s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 844 (931)
......||+.|||||++.+..+ +.++||||+||++|||++|+.||...+.. .+.+ .+..+.. .+
T Consensus 167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~---~~~~----~i~~~~~------~~ 231 (275)
T 3hyh_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP---VLFK----NISNGVY------TL 231 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHTCC------CC
T ss_pred --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH---HHHH----HHHcCCC------CC
Confidence 2234579999999999998876 57999999999999999999999743321 1111 2222221 11
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 845 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 845 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
....+ ..+.+++.+||+.||++|||++|+++
T Consensus 232 p~~~s----~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 232 PKFLS----PGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CTTSC----HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCCC----HHHHHHHHHHccCChhHCcCHHHHHc
Confidence 11222 35789999999999999999999976
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=5e-46 Score=407.57 Aligned_cols=241 Identities=26% Similarity=0.344 Sum_probs=192.2
Q ss_pred HHhhccccCccCcEEEEEEEEC----CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 683 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~----~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV 683 (931)
.|++.+.||+|+||+||+|+.. .++.||||+++... ......+.+|+++|++++|||||++++++.+++..++|
T Consensus 25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv 104 (304)
T 3ubd_A 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI 104 (304)
T ss_dssp GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEE
T ss_pred ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 4778899999999999999863 46899999997542 22345688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccc
Q 002358 684 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 763 (931)
Q Consensus 684 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~ 763 (931)
||||+||+|.+++.. .+.+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+....
T Consensus 105 mEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 105 LDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp ECCCTTCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEcCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 999999999999974 4579999999999999999999998 9999999999999999999999999999986543
Q ss_pred cccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccccc
Q 002358 764 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 843 (931)
Q Consensus 764 ~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~ 843 (931)
... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||...+..+ +.. .+..+.. .
T Consensus 179 ~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~---~~~----~i~~~~~------~ 244 (304)
T 3ubd_A 179 HEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE---TMT----MILKAKL------G 244 (304)
T ss_dssp --C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH----HHHHCCC------C
T ss_pred CCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH---HHH----HHHcCCC------C
Confidence 322 2334579999999999999999999999999999999999999997443221 111 1212211 1
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 002358 844 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKM 874 (931)
Q Consensus 844 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~ 874 (931)
+....+ .++.+++.+||+.||++|||+
T Consensus 245 ~p~~~s----~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 245 MPQFLS----PEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp CCTTSC----HHHHHHHHHHTCSSGGGSTTC
T ss_pred CCCcCC----HHHHHHHHHHcccCHHHCCCC
Confidence 111222 357899999999999999984
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.5e-44 Score=396.90 Aligned_cols=249 Identities=23% Similarity=0.366 Sum_probs=187.7
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc-hhhhhHHHHHHHHHhcCCCCCcceeEEEecCC---------
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--------- 678 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~--------- 678 (931)
.|++.+.||+|+||+||+|+++ +|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+.+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 3677899999999999999986 689999999865433 34567999999999999999999999986544
Q ss_pred ---eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecc
Q 002358 679 ---QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDF 755 (931)
Q Consensus 679 ---~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DF 755 (931)
..++|||||++|+|.+++.........++..++.++.||++||+|||+ ++|+||||||+|||++.++.+||+||
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEccC
Confidence 368999999999999999854333345667788999999999999998 89999999999999999999999999
Q ss_pred cccccccccccc-----------cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHH
Q 002358 756 GLSRQAEEDLTH-----------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIV 824 (931)
Q Consensus 756 Gla~~~~~~~~~-----------~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~ 824 (931)
|+|+........ .....+||+.|||||++.+..|+.++|||||||++|||++ ||... .+..
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~-----~~~~ 234 (299)
T 4g31_A 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ-----MERV 234 (299)
T ss_dssp CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH-----HHHH
T ss_pred ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc-----cHHH
Confidence 999876543211 1223469999999999999999999999999999999996 77521 1111
Q ss_pred HHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 825 HWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 825 ~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
..+. .+......... ......+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~-~~~~~~~p~~~---------~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 235 RTLT-DVRNLKFPPLF---------TQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHH-HHHTTCCCHHH---------HHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHH-HHhcCCCCCCC---------cccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111 11222211111 112224578999999999999999999875
No 16
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.9e-42 Score=383.01 Aligned_cols=277 Identities=41% Similarity=0.716 Sum_probs=242.0
Q ss_pred HHhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEecCC
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 689 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 689 (931)
.|++.+.||+|+||.||+|++++++.||||++........+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 40 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (321)
T 2qkw_B 40 NFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMEN 119 (321)
T ss_dssp CCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTT
T ss_pred ccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCC
Confidence 34557889999999999999988999999998876666678899999999999999999999999999999999999999
Q ss_pred CCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc-cc
Q 002358 690 GTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL-TH 767 (931)
Q Consensus 690 gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~-~~ 767 (931)
|+|.+++.... ....+++..++.++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 120 ~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 196 (321)
T 2qkw_B 120 GNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTH 196 (321)
T ss_dssp CBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCC
T ss_pred CcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 99999987543 23468999999999999999999998 899999999999999999999999999998643322 22
Q ss_pred cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccCC
Q 002358 768 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 847 (931)
Q Consensus 768 ~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~ 847 (931)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||.............|.......+.+...+++.+...
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (321)
T 2qkw_B 197 LSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK 276 (321)
T ss_dssp CBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTC
T ss_pred cccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccc
Confidence 23344589999999999888999999999999999999999999986555555667777777777777888888888777
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 848 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 848 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
...+....+.+++.+||+.||++|||++|+++.|+.+.+..+
T Consensus 277 ~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~ 318 (321)
T 2qkw_B 277 IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318 (321)
T ss_dssp SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSC
T ss_pred cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhccc
Confidence 888889999999999999999999999999999999887654
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-42 Score=394.83 Aligned_cols=259 Identities=19% Similarity=0.328 Sum_probs=199.0
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEec------CCeE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE------EHQR 680 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~------~~~~ 680 (931)
.|++.+.||+|+||+||+|+++ +|+.||||+++... ....+.+.+|+++|++++|||||++++++.. .+..
T Consensus 55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~ 134 (398)
T 4b99_A 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV 134 (398)
T ss_dssp SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence 4777899999999999999986 69999999997543 2345678999999999999999999998754 3678
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccc
Q 002358 681 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 760 (931)
Q Consensus 681 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~ 760 (931)
++|||||+ |+|.+++.. .+.+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 135 ~ivmE~~~-g~L~~~i~~---~~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 135 YVVLDLME-SDLHQIIHS---SQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEECCS-EEHHHHHTS---SSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEeCCC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 99999996 689999973 5679999999999999999999998 9999999999999999999999999999987
Q ss_pred ccccc---cccccccccCCCccCCCccCCC-CCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCe
Q 002358 761 AEEDL---THISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 836 (931)
Q Consensus 761 ~~~~~---~~~~~~~~gt~~y~APE~l~~~-~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 836 (931)
+.... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||.+.+..+....+ .........
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I---~~~~g~p~~ 284 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLI---MMVLGTPSP 284 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHH---HHHHCCCCG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHH---HHhcCCCCh
Confidence 54321 2223456799999999998775 5689999999999999999999999755432222111 111100000
Q ss_pred eeccc-----------ccccCC--CC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 837 ISIVD-----------PVLIGN--VK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 837 ~~i~d-----------~~l~~~--~~-----~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.... ..+... .+ +.....+.+|+.+||+.||++|||++|+++
T Consensus 285 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 285 -AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp -GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0000 000000 00 011235789999999999999999999875
No 18
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=7e-42 Score=380.39 Aligned_cols=286 Identities=39% Similarity=0.701 Sum_probs=242.2
Q ss_pred ccChhhHHHHH--HhhccccCccCcEEEEEEEECCCcEEEEEEccCccch-hhhhHHHHHHHHHhcCCCCCcceeEEEec
Q 002358 600 FIPLPELEEAT--NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSH-RTQQFVTEVALLSRIHHRNLVPLIGYCEE 676 (931)
Q Consensus 600 ~~~~~~l~~~~--~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g~~~~ 676 (931)
.++..++.... |++.+.||+|+||.||+|.+++|+.||||++...... ....+.+|++++++++||||+++++++..
T Consensus 19 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 98 (326)
T 3uim_A 19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT 98 (326)
T ss_dssp ECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECC
T ss_pred eecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEec
Confidence 34555655444 4457899999999999999888999999999764332 33478999999999999999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecc
Q 002358 677 EHQRILVYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDF 755 (931)
Q Consensus 677 ~~~~~lV~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DF 755 (931)
....++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+.+..+|+||||||+|||++.++.+||+||
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Df 178 (326)
T 3uim_A 99 PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 178 (326)
T ss_dssp SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCC
T ss_pred CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccC
Confidence 999999999999999999998653 3445899999999999999999999833339999999999999999999999999
Q ss_pred cccccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCc--cchhhHHHHHHHhhhc
Q 002358 756 GLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDF--GAELNIVHWARSMIKK 833 (931)
Q Consensus 756 Gla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~--~~~~~l~~~~~~~~~~ 833 (931)
|+++..............||+.|+|||.+.+..++.++||||||+++|||++|+.||..... .......+|+......
T Consensus 179 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 258 (326)
T 3uim_A 179 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 258 (326)
T ss_dssp SSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSS
T ss_pred ccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhc
Confidence 99987655444444555699999999999888899999999999999999999999963222 2344567788888888
Q ss_pred CCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 002358 834 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSI 885 (931)
Q Consensus 834 ~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 885 (931)
.....+.+..+......+....+.+++.+||+.+|++|||++||++.|++..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 259 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp CCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred hhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 8888888888888888889999999999999999999999999999998743
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=5.9e-41 Score=377.97 Aligned_cols=194 Identities=25% Similarity=0.416 Sum_probs=166.8
Q ss_pred HHhhccccCccCcEEEEEEEEC----CCcEEEEEEccCccchhhhhHHHHHHHHHhc-CCCCCcceeEEEecCCeEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVY 684 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~----~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~~~~lV~ 684 (931)
.|++.++||+|+||+||+|+.+ .++.||+|++.... ...++.+|+++|+.+ +|||||++++++.+.++.++||
T Consensus 22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm 99 (361)
T 4f9c_A 22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM 99 (361)
T ss_dssp TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence 4777899999999999999864 46789999986542 345688999999998 6999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCC-CceEEecccccccccc
Q 002358 685 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN-MRAKVSDFGLSRQAEE 763 (931)
Q Consensus 685 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~-~~vkL~DFGla~~~~~ 763 (931)
|||++|+|.+++. .+++..+..++.|++.||+|||+ ++|+||||||+|||++.+ +.+||+|||+|+...+
T Consensus 100 E~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~ 170 (361)
T 4f9c_A 100 PYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD 170 (361)
T ss_dssp ECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred eCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence 9999999999985 37899999999999999999998 999999999999999876 7999999999976433
Q ss_pred cccc---------------------------cccccccCCCccCCCccCCC-CCCccchhHHHHHHHHHHHhCCCCCCc
Q 002358 764 DLTH---------------------------ISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSV 814 (931)
Q Consensus 764 ~~~~---------------------------~~~~~~gt~~y~APE~l~~~-~~s~ksDVwSlGvlL~eLltG~~Pf~~ 814 (931)
.... .....+||+.|+|||++.+. .|+.++||||+||++|||++|+.||..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 2111 11234699999999998775 589999999999999999999999963
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=6.3e-41 Score=399.97 Aligned_cols=250 Identities=21% Similarity=0.349 Sum_probs=206.8
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEecC
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 688 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 688 (931)
.|++.+.||+|+||.||+|..+ +|+.||+|++........+.+.+|+++|+.++|||||++++++.+....++|||||+
T Consensus 158 ~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~ 237 (573)
T 3uto_A 158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS 237 (573)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred ccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecC
Confidence 4677899999999999999986 689999999977655666789999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCC--CceEEeccccccccccccc
Q 002358 689 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN--MRAKVSDFGLSRQAEEDLT 766 (931)
Q Consensus 689 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~--~~vkL~DFGla~~~~~~~~ 766 (931)
||+|.+++.. ....+++..+..++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|||+++.+.....
T Consensus 238 gg~L~~~i~~--~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~ 312 (573)
T 3uto_A 238 GGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312 (573)
T ss_dssp CCBHHHHHTC--TTSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred CCcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence 9999999864 24569999999999999999999998 999999999999999854 8899999999987654322
Q ss_pred ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccC
Q 002358 767 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 846 (931)
Q Consensus 767 ~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 846 (931)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||......+ ... .+..+.. . +.+....
T Consensus 313 --~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~---~~~----~i~~~~~-~-~~~~~~~ 381 (573)
T 3uto_A 313 --VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE---TLR----NVKSCDW-N-MDDSAFS 381 (573)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH---HHH----HHHTTCC-C-CCSGGGT
T ss_pred --eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH---HHH----HHHhCCC-C-CCccccc
Confidence 234569999999999999999999999999999999999999997443221 111 1212111 0 1111111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 847 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 847 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
..+ ..+.+|+.+||+.||++|||++|+++
T Consensus 382 ~~s----~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 382 GIS----EDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp TSC----HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 222 35779999999999999999999976
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.5e-40 Score=394.91 Aligned_cols=246 Identities=22% Similarity=0.283 Sum_probs=196.5
Q ss_pred HhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc---hhhhhHHH---HHHHHHhcCCCCCcceeEEEecCCeEEEE
Q 002358 611 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVT---EVALLSRIHHRNLVPLIGYCEEEHQRILV 683 (931)
Q Consensus 611 ~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~---~~~~~~~~---E~~il~~l~HpnIv~l~g~~~~~~~~~lV 683 (931)
|++.++||+|+||.||+|+.+ +|+.||||++.+... .....+.+ ++.+++.++|||||++++++.+.+..++|
T Consensus 191 f~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylV 270 (689)
T 3v5w_A 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI 270 (689)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEE
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEE
Confidence 566789999999999999987 689999999864321 12223334 45666777899999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccc
Q 002358 684 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 763 (931)
Q Consensus 684 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~ 763 (931)
||||+||+|.++|.. .+.+++..+..++.||+.||+|||+ ++|+||||||+||||+.+|.+||+|||+|+....
T Consensus 271 mEy~~GGdL~~~l~~---~~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 271 LDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp ECCCCSCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 999999999999974 4679999999999999999999998 9999999999999999999999999999987654
Q ss_pred cccccccccccCCCccCCCccCC-CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccc
Q 002358 764 DLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 842 (931)
Q Consensus 764 ~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~ 842 (931)
.. ....+||+.|||||++.. ..|+.++|+||+||++|||++|+.||......+...+.. .+.....
T Consensus 345 ~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~----~i~~~~~------ 411 (689)
T 3v5w_A 345 KK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR----MTLTMAV------ 411 (689)
T ss_dssp CC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHH----HHHHCCC------
T ss_pred CC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH----hhcCCCC------
Confidence 32 234579999999999964 579999999999999999999999997544333222222 1111111
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 002358 843 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPK-----MQEIVL 879 (931)
Q Consensus 843 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs-----~~evl~ 879 (931)
.+....+ .++.+++.+||+.||++|++ ++||++
T Consensus 412 ~~p~~~S----~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 412 ELPDSFS----PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp CCCTTSC----HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CCCccCC----HHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 1111222 35789999999999999998 677653
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=367.37 Aligned_cols=259 Identities=25% Similarity=0.386 Sum_probs=212.8
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEec
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 687 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 687 (931)
..+.+.+.||+|+||.||+|.+. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 45667899999999999999986 58999999987666667788999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccccc
Q 002358 688 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 767 (931)
Q Consensus 688 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~~ 767 (931)
++|+|.+++... ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++........
T Consensus 90 ~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (310)
T 3s95_A 90 KGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164 (310)
T ss_dssp TTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred CCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence 999999999853 4568999999999999999999998 89999999999999999999999999999875433221
Q ss_pred c-------------ccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccch---hhHHHHHHHhh
Q 002358 768 I-------------SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE---LNIVHWARSMI 831 (931)
Q Consensus 768 ~-------------~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~---~~l~~~~~~~~ 831 (931)
. .....||+.|+|||++.+..++.++||||||+++|||++|..|+........ .......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~---- 240 (310)
T 3s95_A 165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL---- 240 (310)
T ss_dssp ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHH----
T ss_pred ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccc----
Confidence 1 1144689999999999999999999999999999999999999863322211 1111111
Q ss_pred hcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 832 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 832 ~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
++...... ...+.+++.+||+.||++|||++|+++.|+++.....
T Consensus 241 ---------~~~~~~~~----~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 241 ---------DRYCPPNC----PPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp ---------HHTCCTTC----CTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ---------cccCCCCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 11111111 2257899999999999999999999999998876554
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=3.9e-40 Score=364.33 Aligned_cols=262 Identities=34% Similarity=0.507 Sum_probs=203.4
Q ss_pred HHHHHhhccccCccCcEEEEEEEECCCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEE
Q 002358 607 EEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 684 (931)
Q Consensus 607 ~~~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~ 684 (931)
....+++.+.||+|+||.||+|++. |+.||||++.... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 3456778899999999999999885 8999999987543 234567999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCC--eEecCCCCCCccccCCCceEEeccccccccc
Q 002358 685 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMRAKVSDFGLSRQAE 762 (931)
Q Consensus 685 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~--ivH~DIkp~NILld~~~~vkL~DFGla~~~~ 762 (931)
||+++|+|.+++........+++..++.++.|+++||+|||+ .+ |+||||||+|||++.++.+||+|||+++...
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 999999999999854323348999999999999999999998 78 9999999999999999999999999997644
Q ss_pred ccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccc
Q 002358 763 EDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 842 (931)
Q Consensus 763 ~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~ 842 (931)
.... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... .....+. ......
T Consensus 191 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~---~~~~~~~---~~~~~~----- 258 (309)
T 3p86_A 191 STFL-SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA---QVVAAVG---FKCKRL----- 258 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH---HHHHHHH---HSCCCC-----
T ss_pred cccc-ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHH---hcCCCC-----
Confidence 3322 223346899999999999999999999999999999999999999743321 1111111 111111
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 843 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 843 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
.+ +......+.+++.+||+.+|++|||++||++.|+.+....
T Consensus 259 ~~----~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 259 EI----PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp CC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred CC----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 11 1122236889999999999999999999999999887654
No 24
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.4e-39 Score=367.24 Aligned_cols=263 Identities=24% Similarity=0.453 Sum_probs=213.6
Q ss_pred HHHHhhccccCccCcEEEEEEEEC--------CCcEEEEEEccCccc-hhhhhHHHHHHHHHhc-CCCCCcceeEEEecC
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEE 677 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~--------~g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~ 677 (931)
...+++.+.||+|+||.||+|++. ++..||||+++.... ...+.+.+|+++++++ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 355677899999999999999863 356799999976533 3457899999999999 899999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhccCC-------------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccc
Q 002358 678 HQRILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL 744 (931)
Q Consensus 678 ~~~~lV~E~~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILl 744 (931)
+..++||||+++|+|.+++.... ....+++..++.++.||++||+|||+ .+|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEE
Confidence 99999999999999999997542 12458899999999999999999998 899999999999999
Q ss_pred cCCCceEEeccccccccccccc-ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhh
Q 002358 745 DINMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELN 822 (931)
Q Consensus 745 d~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~ 822 (931)
+.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.......
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~--- 313 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 313 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---
Confidence 9999999999999986544322 12233457889999999999999999999999999999999 999997443322
Q ss_pred HHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 823 IVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 823 l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
+... +..+... ..+......+.+++.+||+.+|++||+++|+++.|+++.....
T Consensus 314 ~~~~----~~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~ 367 (370)
T 2psq_A 314 LFKL----LKEGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367 (370)
T ss_dssp HHHH----HHTTCCC---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHH----HhcCCCC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 2211 2222111 1112223468899999999999999999999999999887654
No 25
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.6e-39 Score=351.17 Aligned_cols=256 Identities=29% Similarity=0.468 Sum_probs=211.8
Q ss_pred HHHhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEecC
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 688 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 688 (931)
..+++.+.||+|+||.||+|.+.+++.||+|++..... ..+++.+|++++++++||||+++++++.+....++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 45677899999999999999998899999999976433 34679999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccccc
Q 002358 689 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 768 (931)
Q Consensus 689 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~~~ 768 (931)
+|+|.+++... ...+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||+++.........
T Consensus 89 ~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 163 (269)
T 4hcu_A 89 HGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 163 (269)
T ss_dssp TCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred CCcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccccccccccc
Confidence 99999999742 4568999999999999999999998 899999999999999999999999999998765443333
Q ss_pred ccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccCC
Q 002358 769 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 847 (931)
Q Consensus 769 ~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~ 847 (931)
.....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...... ..... +..+.. ...
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~---~~~~~----~~~~~~--~~~------ 228 (269)
T 4hcu_A 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS---EVVED----ISTGFR--LYK------ 228 (269)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHHH----HHTTCC--CCC------
T ss_pred ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH---HHHHH----HhcCcc--CCC------
Confidence 344457888999999998899999999999999999999 99999743321 11111 111110 011
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 002358 848 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 886 (931)
Q Consensus 848 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 886 (931)
+......+.+++.+||+.+|++||+++|+++.|+++..
T Consensus 229 -~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 229 -PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp -CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 11122368899999999999999999999999998865
No 26
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1e-38 Score=351.65 Aligned_cols=280 Identities=36% Similarity=0.586 Sum_probs=225.1
Q ss_pred cccChhhHHHHHHhhc--------cccCccCcEEEEEEEECCCcEEEEEEccCcc----chhhhhHHHHHHHHHhcCCCC
Q 002358 599 YFIPLPELEEATNNFC--------KKIGKGSFGSVYYGKMKDGKEVAVKIMADSC----SHRTQQFVTEVALLSRIHHRN 666 (931)
Q Consensus 599 ~~~~~~~l~~~~~~~~--------~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~----~~~~~~~~~E~~il~~l~Hpn 666 (931)
..+++.++...+.+|. +.||+|+||.||+|.+ +++.||||++.... ....+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 3466788888888875 5699999999999987 48999999986532 234567999999999999999
Q ss_pred CcceeEEEecCCeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccC
Q 002358 667 LVPLIGYCEEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI 746 (931)
Q Consensus 667 Iv~l~g~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~ 746 (931)
|+++++++.+.+..++||||+++|+|.+++........+++..++.++.|+++||+|||+ .+++||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEEcC
Confidence 999999999999999999999999999999755445679999999999999999999998 89999999999999999
Q ss_pred CCceEEecccccccccccccc-cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHH
Q 002358 747 NMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVH 825 (931)
Q Consensus 747 ~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~ 825 (931)
++.+||+|||+++........ ......||+.|+|||.+.+ .++.++||||||+++|||++|+.||........ ...
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~ 245 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL--LLD 245 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB--TTH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH--HHH
Confidence 999999999999865433221 2233468999999998865 588999999999999999999999974433221 111
Q ss_pred HHHHhhh-cCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 002358 826 WARSMIK-KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 886 (931)
Q Consensus 826 ~~~~~~~-~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 886 (931)
+...... ...+.+.+++.+ ...+......+.+++.+||+.+|++||+++||++.|+++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 246 IKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 1111111 122333444433 23456677789999999999999999999999999998753
No 27
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=9.2e-40 Score=352.68 Aligned_cols=260 Identities=28% Similarity=0.468 Sum_probs=212.5
Q ss_pred HHHHHhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEe
Q 002358 607 EEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 607 ~~~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
....+++.+.||+|+||.||+|+++++..||+|+++.... ..+++.+|++++++++||||+++++++.+....++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 3456777899999999999999999888999999975433 346789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccc
Q 002358 687 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 766 (931)
Q Consensus 687 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~ 766 (931)
+++++|.+++... ...+++..++.++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++........
T Consensus 85 ~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 85 ISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp CTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred cCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 9999999998752 3458999999999999999999998 8999999999999999999999999999987655443
Q ss_pred ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeeccccccc
Q 002358 767 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 845 (931)
Q Consensus 767 ~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 845 (931)
.......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... ... . +..+.. ...+
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~---~-~~~~~~--~~~~--- 227 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE---VVL---K-VSQGHR--LYRP--- 227 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH---HHH---H-HHTTCC--CCCC---
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH---HHH---H-HHcCCC--CCCC---
Confidence 33334456788999999998889999999999999999999 999997433211 111 1 111111 0111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 846 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 846 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
......+.+++.+||+.+|++|||++|+++.|+.+....
T Consensus 228 ----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 228 ----HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp ----TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred ----CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 111236889999999999999999999999999886644
No 28
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3.4e-39 Score=354.66 Aligned_cols=248 Identities=24% Similarity=0.371 Sum_probs=204.4
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEecC
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 688 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 688 (931)
.|++.+.||+|+||.||+|... +++.||||++........+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 21 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 100 (297)
T 3fxz_A 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100 (297)
T ss_dssp TBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred ceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCC
Confidence 4666789999999999999864 689999999876555556778999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccccc
Q 002358 689 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 768 (931)
Q Consensus 689 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~~~ 768 (931)
+|+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++.........
T Consensus 101 ~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 172 (297)
T 3fxz_A 101 GGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK- 172 (297)
T ss_dssp TCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC-
T ss_pred CCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc-
Confidence 9999999974 358899999999999999999998 89999999999999999999999999998876543332
Q ss_pred ccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccCCC
Q 002358 769 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 848 (931)
Q Consensus 769 ~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~ 848 (931)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||...+.... .......+.. ... .
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~------~~~~~~~~~~-~~~-------~ 238 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA------LYLIATNGTP-ELQ-------N 238 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHHCSC-CCS-------C
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhCCCC-CCC-------C
Confidence 3345699999999999999999999999999999999999999974332111 1111111111 110 1
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 849 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 849 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
+......+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 239 PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1122346789999999999999999999875
No 29
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=362.98 Aligned_cols=264 Identities=26% Similarity=0.494 Sum_probs=212.1
Q ss_pred hHHHHHHhhccccCccCcEEEEEEEEC----CCcEEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCe
Q 002358 605 ELEEATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 679 (931)
Q Consensus 605 ~l~~~~~~~~~~LG~G~fG~Vy~a~~~----~g~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~ 679 (931)
++....|++.+.||+|+||.||+|.+. .+..||||+++... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 124 (325)
T 3kul_A 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL 124 (325)
T ss_dssp BCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC
T ss_pred ccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc
Confidence 444567778899999999999999985 34569999997653 3445779999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccc
Q 002358 680 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 759 (931)
Q Consensus 680 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~ 759 (931)
.++||||+++|+|.++++.. ...+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 125 AMIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred cEEEeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 99999999999999999742 4568999999999999999999998 899999999999999999999999999998
Q ss_pred cccccccc--cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCe
Q 002358 760 QAEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDV 836 (931)
Q Consensus 760 ~~~~~~~~--~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 836 (931)
........ ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... ..... +..+..
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~---~~~~~----~~~~~~ 272 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR---DVISS----VEEGYR 272 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH---HHHHH----HHTTCC
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH---HHHHH----HHcCCC
Confidence 76543222 1222346778999999998899999999999999999999 99999643221 11111 111111
Q ss_pred eecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 837 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 837 ~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
. ..+......+.+++.+||+.+|++||+++||++.|+.+.....
T Consensus 273 ~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 273 L---------PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp C---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred C---------CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 0 0112223468899999999999999999999999999876543
No 30
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=7.5e-40 Score=364.02 Aligned_cols=265 Identities=26% Similarity=0.352 Sum_probs=207.3
Q ss_pred HHHhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCC----eEEEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH----QRILVY 684 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~----~~~lV~ 684 (931)
..|++.+.||+|+||.||+|++. ++.||||++.... .....+.+|+.++++++||||+++++++.... ..++||
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 45667899999999999999987 8999999986542 33445677999999999999999999997744 469999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCC----------CeEecCCCCCCccccCCCceEEec
Q 002358 685 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP----------GIIHRDVKSSNILLDINMRAKVSD 754 (931)
Q Consensus 685 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~----------~ivH~DIkp~NILld~~~~vkL~D 754 (931)
||+++|+|.++++. ..+++..++.++.|+++||+|||+ . +|+||||||+|||++.++.+||+|
T Consensus 102 e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 102 AFHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp ECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred ecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 99999999999974 358999999999999999999997 6 999999999999999999999999
Q ss_pred ccccccccccccc-cccccccCCCccCCCccCC-----CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhh------
Q 002358 755 FGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGN-----QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELN------ 822 (931)
Q Consensus 755 FGla~~~~~~~~~-~~~~~~gt~~y~APE~l~~-----~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~------ 822 (931)
||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..........
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 9999875543322 2233568999999999876 356678999999999999999999997543321111
Q ss_pred ----HHHHHHHhhhcCCeeecccccccCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 002358 823 ----IVHWARSMIKKGDVISIVDPVLIGN-VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 887 (931)
Q Consensus 823 ----l~~~~~~~~~~~~~~~i~d~~l~~~-~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 887 (931)
...+...... ... .+.+... ........+.+++.+||+.||++|||++||++.|+++.+.
T Consensus 255 ~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 255 QHPSLEDMQEVVVH-KKK----RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp SSCCHHHHHHHHTT-SCC----CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCchhhhhhhhhc-ccC----CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 1111111111 111 1111111 1224556799999999999999999999999999998764
No 31
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2e-40 Score=363.31 Aligned_cols=268 Identities=28% Similarity=0.452 Sum_probs=209.3
Q ss_pred HHHHHHhhccccCccCcEEEEEEEEC-----CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEec--CC
Q 002358 606 LEEATNNFCKKIGKGSFGSVYYGKMK-----DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE--EH 678 (931)
Q Consensus 606 l~~~~~~~~~~LG~G~fG~Vy~a~~~-----~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~ 678 (931)
+....+++.+.||+|+||.||+|++. +++.||||++........+.+.+|++++++++||||+++++++.. ..
T Consensus 7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 34456778899999999999999852 588999999987666667889999999999999999999999865 35
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccc
Q 002358 679 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 758 (931)
Q Consensus 679 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla 758 (931)
..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~ 161 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLT 161 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred ceEEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCccc
Confidence 589999999999999999753 3458999999999999999999998 89999999999999999999999999999
Q ss_pred cccccccc--ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCcc---------chhhHHHHH
Q 002358 759 RQAEEDLT--HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFG---------AELNIVHWA 827 (931)
Q Consensus 759 ~~~~~~~~--~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~---------~~~~l~~~~ 827 (931)
+....... .......++..|+|||.+.+..++.++||||||+++|||++|..|+...... .........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (295)
T 3ugc_A 162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241 (295)
T ss_dssp C-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred ccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHH
Confidence 87644322 1223344677899999999889999999999999999999999998632211 001111112
Q ss_pred HHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 002358 828 RSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 887 (931)
Q Consensus 828 ~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 887 (931)
...+..+... ..+......+.+++.+||+.+|++|||++||++.|+++...
T Consensus 242 ~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 242 IELLKNNGRL---------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHHHTTCCC---------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHhccCcC---------CCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 2222221111 11222334788999999999999999999999999988653
No 32
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2e-39 Score=352.91 Aligned_cols=261 Identities=27% Similarity=0.455 Sum_probs=211.4
Q ss_pred HHHHHHhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 606 LEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 606 l~~~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
+....+++.+.||+|+||.||+|.+++++.||+|+++.... ..+++.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 33456777899999999999999999889999999976533 34678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
|+++|+|.+++... ...+++..++.++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 100 ~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 174 (283)
T 3gen_A 100 YMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174 (283)
T ss_dssp CCTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred ccCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence 99999999999742 3468999999999999999999998 899999999999999999999999999998765443
Q ss_pred cccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeecccccc
Q 002358 766 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 844 (931)
Q Consensus 766 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 844 (931)
........+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||...... ..... +..+.. ...
T Consensus 175 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~---~~~~~----~~~~~~-----~~~ 242 (283)
T 3gen_A 175 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS---ETAEH----IAQGLR-----LYR 242 (283)
T ss_dssp HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH---HHHHH----HHTTCC-----CCC
T ss_pred cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh---HHHHH----HhcccC-----CCC
Confidence 333334457788999999998889999999999999999998 99999743321 11111 111110 000
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 845 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 845 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
+......+.+++.+||+.+|++|||++|+++.|+++...+
T Consensus 243 ----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 243 ----PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp ----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ----CCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 1111236889999999999999999999999999987654
No 33
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.8e-39 Score=353.65 Aligned_cols=263 Identities=26% Similarity=0.403 Sum_probs=207.8
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc---chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 684 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~ 684 (931)
..|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 45677899999999999999876 68999999985432 234567999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccc
Q 002358 685 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 764 (931)
Q Consensus 685 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~ 764 (931)
||+++|+|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 91 e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 91 EYIEGPTLSEYIES---HGPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp ECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred eCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 99999999999974 3568999999999999999999998 89999999999999999999999999999876544
Q ss_pred ccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccc
Q 002358 765 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 844 (931)
Q Consensus 765 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 844 (931)
.........||+.|+|||.+.+..++.++||||||+++|||++|+.||....... .....+.. ..... ....
T Consensus 165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~------~~~~~~~~-~~~~~-~~~~ 236 (294)
T 4eqm_A 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS------IAIKHIQD-SVPNV-TTDV 236 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH------HHHHHHSS-CCCCH-HHHS
T ss_pred cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHhhc-cCCCc-chhc
Confidence 3333444568999999999999999999999999999999999999997433211 11111211 11111 0111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHhhhhhhc
Q 002358 845 IGNVKIESIWRIAEVAIQCVEQRGFSRP-KMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 845 ~~~~~~~~~~~l~~li~~Cl~~dP~~RP-s~~evl~~L~~~~~~~~ 889 (931)
....+..+.+++.+|++.+|++|| +++++.+.|++......
T Consensus 237 ----~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~ 278 (294)
T 4eqm_A 237 ----RKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENR 278 (294)
T ss_dssp ----CTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred ----ccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence 122234688999999999999999 99999999998766543
No 34
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=5.8e-39 Score=352.10 Aligned_cols=259 Identities=26% Similarity=0.390 Sum_probs=200.9
Q ss_pred HHHhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHh--cCCCCCcceeEEEec----CCeEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSR--IHHRNLVPLIGYCEE----EHQRIL 682 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~--l~HpnIv~l~g~~~~----~~~~~l 682 (931)
..|++.+.||+|+||.||+|++ +++.||||++... ..+.+.+|.+++.. ++||||+++++++.. ....++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 4566789999999999999998 5899999998643 34556677777777 789999999998654 356889
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhh--------hcCCCCeEecCCCCCCccccCCCceEEec
Q 002358 683 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH--------TGCNPGIIHRDVKSSNILLDINMRAKVSD 754 (931)
Q Consensus 683 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH--------~~~~~~ivH~DIkp~NILld~~~~vkL~D 754 (931)
||||+++|+|.++++ ...+++..++.++.|+++||+||| + .+|+||||||+|||++.++.+||+|
T Consensus 84 v~e~~~~g~L~~~l~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp EECCCTTCBHHHHHT----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTSCEEECC
T ss_pred ehhhccCCCHHHHHh----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCCCEEEee
Confidence 999999999999996 346899999999999999999999 6 8999999999999999999999999
Q ss_pred cccccccccccccc---ccccccCCCccCCCccCCC------CCCccchhHHHHHHHHHHHhC----------CCCCCcc
Q 002358 755 FGLSRQAEEDLTHI---SSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISG----------KKPVSVE 815 (931)
Q Consensus 755 FGla~~~~~~~~~~---~~~~~gt~~y~APE~l~~~------~~s~ksDVwSlGvlL~eLltG----------~~Pf~~~ 815 (931)
||+++......... .....||+.|+|||++.+. .++.++|||||||++|||++| +.||...
T Consensus 157 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~ 236 (301)
T 3q4u_A 157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236 (301)
T ss_dssp CTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccccc
Confidence 99997654432221 2234689999999999876 556799999999999999999 8888633
Q ss_pred CccchhhHHHHHHHhhh-cCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 002358 816 DFGAELNIVHWARSMIK-KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDS 884 (931)
Q Consensus 816 ~~~~~~~l~~~~~~~~~-~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 884 (931)
..... .... ...... ......+.. ...+......+.+++.+||+.||++|||++||++.|+++
T Consensus 237 ~~~~~-~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 237 VPNDP-SFED-MRKVVCVDQQRPNIPN----RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCSSC-CHHH-HHHHHTTSCCCCCCCG----GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCc-chhh-hhHHHhccCCCCCCCh----hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 22211 1111 111111 111111110 112234567899999999999999999999999999875
No 35
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=362.22 Aligned_cols=248 Identities=23% Similarity=0.344 Sum_probs=195.1
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEe
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
..|++.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 10 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~ 89 (347)
T 3zgw_A 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEY 89 (347)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeC
Confidence 45667899999999999999975 78999999986543 23456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccc
Q 002358 687 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 766 (931)
Q Consensus 687 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~ 766 (931)
+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++........
T Consensus 90 ~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 163 (347)
T 3zgw_A 90 CPGGELFDYIIS---QDRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163 (347)
T ss_dssp CTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred CCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence 999999999874 4568999999999999999999998 8999999999999999999999999999887554433
Q ss_pred ccccccccCCCccCCCccCCCCC-CccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccccccc
Q 002358 767 HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 845 (931)
Q Consensus 767 ~~~~~~~gt~~y~APE~l~~~~~-s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 845 (931)
.......||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... .... .+..+.. .+.
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~---~~~~----~i~~~~~------~~p 230 (347)
T 3zgw_A 164 YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM---ALYK----KIMRGKY------DVP 230 (347)
T ss_dssp --------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHTCC------CCC
T ss_pred ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH---HHHH----HHHcCCC------CCC
Confidence 33445569999999999988775 88999999999999999999999743321 1111 1111211 011
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 846 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 846 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
... ...+.+++.+||+.||++|||++|+++
T Consensus 231 ~~~----s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 231 KWL----SPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCC----CHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 111 235678999999999999999999985
No 36
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.6e-38 Score=351.66 Aligned_cols=245 Identities=25% Similarity=0.398 Sum_probs=202.9
Q ss_pred hccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEecCCCC
Q 002358 613 FCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGT 691 (931)
Q Consensus 613 ~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~gs 691 (931)
..+.||+|+||.||+|+.+ +|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++|+
T Consensus 49 ~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 128 (321)
T 2c30_A 49 SYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128 (321)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCB
T ss_pred ccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCC
Confidence 4568999999999999987 799999999976655566789999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccccccccc
Q 002358 692 LRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSV 771 (931)
Q Consensus 692 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~ 771 (931)
|.+++.. ..+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||++......... ...
T Consensus 129 L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~-~~~ 200 (321)
T 2c30_A 129 LTDIVSQ----VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKS 200 (321)
T ss_dssp HHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC-BCC
T ss_pred HHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccc-ccc
Confidence 9999863 468999999999999999999998 89999999999999999999999999999876543222 234
Q ss_pred cccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccCCCCHH
Q 002358 772 ARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIE 851 (931)
Q Consensus 772 ~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~ 851 (931)
..||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+. ......... ...
T Consensus 201 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~---~~~~~~~~----~~~~~~~~~-------~~~ 266 (321)
T 2c30_A 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP---VQAMKRLR----DSPPPKLKN-------SHK 266 (321)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH---HHHHHHHH----HSSCCCCTT-------GGG
T ss_pred ccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHh----cCCCCCcCc-------ccc
Confidence 5699999999999999999999999999999999999999974322 11111111 111111100 111
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 852 SIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 852 ~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
....+.+++.+||+.||++|||++|+++
T Consensus 267 ~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 267 VSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 2236789999999999999999999875
No 37
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=9.6e-40 Score=371.47 Aligned_cols=259 Identities=29% Similarity=0.433 Sum_probs=210.5
Q ss_pred HHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc-hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
...+.+.+.||+|+||.||+|.++ +++.||||+++.... ...++|.+|+++|++++||||+++++++...+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 345667899999999999999987 789999999876533 344678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
|+++|+|.++++.. ...+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 193 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~ 267 (377)
T 3cbl_A 193 LVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267 (377)
T ss_dssp CCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred cCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence 99999999999742 3458899999999999999999998 899999999999999999999999999998654332
Q ss_pred cccc-cccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeeccccc
Q 002358 766 THIS-SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 843 (931)
Q Consensus 766 ~~~~-~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~ 843 (931)
.... ....+++.|+|||.+....++.++|||||||++|||++ |..||...... ... ..+..+....
T Consensus 268 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~---~~~----~~~~~~~~~~----- 335 (377)
T 3cbl_A 268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ---QTR----EFVEKGGRLP----- 335 (377)
T ss_dssp EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH---HHH----HHHHTTCCCC-----
T ss_pred eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHH----HHHHcCCCCC-----
Confidence 2111 12235778999999998899999999999999999998 99999743221 111 2222221111
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 002358 844 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 887 (931)
Q Consensus 844 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 887 (931)
.+...+..+.+++.+||+.+|++|||++||++.|+++.+.
T Consensus 336 ----~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 336 ----CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 1112234688999999999999999999999999988653
No 38
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=8.1e-39 Score=356.83 Aligned_cols=245 Identities=25% Similarity=0.410 Sum_probs=202.3
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEe
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
.|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 16 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 95 (328)
T 3fe3_A 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEY 95 (328)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred CEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEEC
Confidence 3667899999999999999984 79999999986542 33456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccc
Q 002358 687 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 766 (931)
Q Consensus 687 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~ 766 (931)
+++|+|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||++.......
T Consensus 96 ~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 168 (328)
T 3fe3_A 96 ASGGEVFDYLVA---HGRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG- 168 (328)
T ss_dssp CTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-
T ss_pred CCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-
Confidence 999999999874 3568999999999999999999998 899999999999999999999999999998654332
Q ss_pred ccccccccCCCccCCCccCCCCCC-ccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccccccc
Q 002358 767 HISSVARGTVGYLDPEYYGNQQLT-EKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 845 (931)
Q Consensus 767 ~~~~~~~gt~~y~APE~l~~~~~s-~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 845 (931)
......||+.|+|||++.+..+. .++||||+||++|||++|+.||...+... +. ..+..+... +
T Consensus 169 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~----~~i~~~~~~------~- 233 (328)
T 3fe3_A 169 -KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE---LR----ERVLRGKYR------I- 233 (328)
T ss_dssp -GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH----HHHHHCCCC------C-
T ss_pred -ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH---HH----HHHHhCCCC------C-
Confidence 23345699999999999887765 79999999999999999999997443221 11 112222110 1
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 846 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 846 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
+......+.+++.+||+.||++|||++|+++
T Consensus 234 ---p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 234 ---PFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp ---CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred ---CCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1112235789999999999999999999875
No 39
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.3e-39 Score=369.91 Aligned_cols=262 Identities=27% Similarity=0.481 Sum_probs=200.9
Q ss_pred HHHHHHhhccccCccCcEEEEEEEEC----CCcEEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeE
Q 002358 606 LEEATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 680 (931)
Q Consensus 606 l~~~~~~~~~~LG~G~fG~Vy~a~~~----~g~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~ 680 (931)
+....+++.+.||+|+||.||+|+++ ++..||||+++... ....+.|.+|++++++++||||+++++++.+....
T Consensus 42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence 33456677899999999999999875 57789999997653 33456899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccc
Q 002358 681 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 760 (931)
Q Consensus 681 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~ 760 (931)
++||||+++|+|.++++.. ...+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 122 ~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 9999999999999999742 4568999999999999999999998 8999999999999999999999999999987
Q ss_pred cccccccc--ccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCee
Q 002358 761 AEEDLTHI--SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVI 837 (931)
Q Consensus 761 ~~~~~~~~--~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~ 837 (931)
........ .....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ....+. +..+..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~---~~~~~~----i~~~~~- 268 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---QDVIKA----VDEGYR- 268 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH---HHHHHH----HHTTEE-
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHH----HHcCCC-
Confidence 65432221 112235778999999998999999999999999999998 9999974322 112221 111111
Q ss_pred ecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 838 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 838 ~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
...+......+.+++.+||+.+|++||+++||++.|+++....
T Consensus 269 --------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 269 --------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp --------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred --------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 0111223346889999999999999999999999999887543
No 40
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.9e-39 Score=378.18 Aligned_cols=259 Identities=24% Similarity=0.419 Sum_probs=210.7
Q ss_pred HHHHHhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEe
Q 002358 607 EEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 607 ~~~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
....+++.+.||+|+||.||+|.+++++.||||+++... ...++|.+|+++|++++||||+++++++. .+..++||||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~ 263 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEF 263 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEee
Confidence 344567789999999999999999989999999997643 34678999999999999999999999987 5678999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccc
Q 002358 687 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 766 (931)
Q Consensus 687 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~ 766 (931)
+++|+|.++++.. ....+++..++.++.||++||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 264 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~ 339 (454)
T 1qcf_A 264 MAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339 (454)
T ss_dssp CTTCBHHHHHHSH-HHHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred cCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence 9999999999742 12357888999999999999999998 8999999999999999999999999999987654332
Q ss_pred ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeeccccccc
Q 002358 767 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 845 (931)
Q Consensus 767 ~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 845 (931)
.......+++.|+|||++....++.++|||||||++|||++ |+.||...... ...+.+ ..+...
T Consensus 340 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~---~~~~~i----~~~~~~-------- 404 (454)
T 1qcf_A 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP---EVIRAL----ERGYRM-------- 404 (454)
T ss_dssp HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHHHH----HHTCCC--------
T ss_pred eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH---HHHHHH----HcCCCC--------
Confidence 22333446789999999988899999999999999999999 99999743321 222221 111110
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 002358 846 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 887 (931)
Q Consensus 846 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 887 (931)
..+...+..+.+++.+||+.+|++|||+++|++.|+++...
T Consensus 405 -~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 405 -PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp -CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred -CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 01112234688999999999999999999999999987643
No 41
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.6e-39 Score=379.78 Aligned_cols=258 Identities=29% Similarity=0.448 Sum_probs=213.1
Q ss_pred HHHHhhccccCccCcEEEEEEEECC-CcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEe
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~~-g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
...+++.+.||+|+||.||+|.++. ++.||||+++... ...++|.+|+++|++++||||++++++|......++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 4456778999999999999999885 8899999997643 3457899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccc
Q 002358 687 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 766 (931)
Q Consensus 687 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~ 766 (931)
+++|+|.+++... ....+++..++.++.||++||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 298 ~~~g~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 373 (495)
T 1opk_A 298 MTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY 373 (495)
T ss_dssp CTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE
T ss_pred cCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccCCce
Confidence 9999999999754 34568999999999999999999998 8999999999999999999999999999987654333
Q ss_pred ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeeccccccc
Q 002358 767 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 845 (931)
Q Consensus 767 ~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 845 (931)
.......+++.|+|||++....++.++|||||||++|||++ |+.||...+... ..+. +..+..
T Consensus 374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~---~~~~----~~~~~~--------- 437 (495)
T 1opk_A 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYEL----LEKDYR--------- 437 (495)
T ss_dssp ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHH----HHTTCC---------
T ss_pred eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH---HHHH----HHcCCC---------
Confidence 33333446789999999998899999999999999999999 999997443322 2221 111111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 002358 846 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 886 (931)
Q Consensus 846 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 886 (931)
...+......+.+++.+||+.+|++||+++||++.|+.+..
T Consensus 438 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 438 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 01122233468899999999999999999999999998753
No 42
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.3e-38 Score=347.21 Aligned_cols=272 Identities=22% Similarity=0.316 Sum_probs=212.9
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEecCC--eEEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--QRILVYE 685 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~--~~~lV~E 685 (931)
.|.+.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++|||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (319)
T 4euu_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (319)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEe
Confidence 4567899999999999999987 48999999987543 234567889999999999999999999987655 7899999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccc----cCCCceEEecccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL----DINMRAKVSDFGLSRQA 761 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILl----d~~~~vkL~DFGla~~~ 761 (931)
|+++|+|.+++........+++..++.++.|+++||+|||+ .+|+||||||+|||+ +.++.+||+|||+++..
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~ 166 (319)
T 4euu_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (319)
T ss_dssp CCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred CCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence 99999999999865444559999999999999999999998 899999999999999 78888999999999876
Q ss_pred cccccccccccccCCCccCCCccC--------CCCCCccchhHHHHHHHHHHHhCCCCCCccCccc-hhhHHHHHHHhhh
Q 002358 762 EEDLTHISSVARGTVGYLDPEYYG--------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA-ELNIVHWARSMIK 832 (931)
Q Consensus 762 ~~~~~~~~~~~~gt~~y~APE~l~--------~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~-~~~l~~~~~~~~~ 832 (931)
..... .....||+.|+|||++. +..++.++|||||||++|||++|+.||....... .......+.....
T Consensus 167 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p 244 (319)
T 4euu_A 167 EDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (319)
T ss_dssp CTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred CCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence 54332 22345899999999875 5788999999999999999999999996433221 1122221111111
Q ss_pred cCCeeecc-----------cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 002358 833 KGDVISIV-----------DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 886 (931)
Q Consensus 833 ~~~~~~i~-----------d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 886 (931)
......+. +..............+.+++.+||+.||++|||++|+++..++...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 11111110 0011123445677789999999999999999999999998887554
No 43
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=362.92 Aligned_cols=272 Identities=24% Similarity=0.438 Sum_probs=217.7
Q ss_pred hHHHHHHhhccccCccCcEEEEEEEEC--------CCcEEEEEEccCccc-hhhhhHHHHHHHHHhc-CCCCCcceeEEE
Q 002358 605 ELEEATNNFCKKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYC 674 (931)
Q Consensus 605 ~l~~~~~~~~~~LG~G~fG~Vy~a~~~--------~g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~g~~ 674 (931)
++....+.+.+.||+|+||.||+|++. .++.||||+++.... ...+++.+|+++++++ +||||+++++++
T Consensus 65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 144 (382)
T 3tt0_A 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144 (382)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence 344556778899999999999999863 246799999976543 3457899999999999 899999999999
Q ss_pred ecCCeEEEEEEecCCCCHHHHhccCCC-------------CCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCC
Q 002358 675 EEEHQRILVYEYMHNGTLRDRLHGSVN-------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSN 741 (931)
Q Consensus 675 ~~~~~~~lV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~N 741 (931)
...+..++||||+++|+|.+++..... ...+++..++.++.|+++||+|||+ .+|+||||||+|
T Consensus 145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~N 221 (382)
T 3tt0_A 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARN 221 (382)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGG
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcce
Confidence 999999999999999999999975421 2458999999999999999999998 899999999999
Q ss_pred ccccCCCceEEeccccccccccccc-ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccc
Q 002358 742 ILLDINMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGA 819 (931)
Q Consensus 742 ILld~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~ 819 (931)
||++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~- 300 (382)
T 3tt0_A 222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE- 300 (382)
T ss_dssp EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-
T ss_pred EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 9999999999999999987644322 22233457889999999999999999999999999999999 99999743321
Q ss_pred hhhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcCCCCcc
Q 002358 820 ELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGGDQKF 895 (931)
Q Consensus 820 ~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~ 895 (931)
.+.+ .+..+..... +......+.+++.+||+.+|++||+++||++.|+++...........
T Consensus 301 --~~~~----~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~ 361 (382)
T 3tt0_A 301 --ELFK----LLKEGHRMDK---------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGY 361 (382)
T ss_dssp --HHHH----HHHTTCCCCC---------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC---
T ss_pred --HHHH----HHHcCCCCCC---------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCCC
Confidence 1222 2222211111 11223368899999999999999999999999999988776554443
No 44
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=6.9e-38 Score=343.02 Aligned_cols=264 Identities=16% Similarity=0.192 Sum_probs=212.9
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhc-CCCCCcceeEEEecCCeEEEEEEe
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
..|++.+.||+|+||.||+|... +++.||||++... ...+.+.+|+++++++ +|+|++++++++.+....++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC--CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 35667899999999999999974 7899999998643 2345788999999999 799999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCc-----eEEecccccccc
Q 002358 687 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR-----AKVSDFGLSRQA 761 (931)
Q Consensus 687 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~-----vkL~DFGla~~~ 761 (931)
+ +++|.+++... ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++. +||+|||+++..
T Consensus 88 ~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 88 L-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp C-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred c-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 9 99999999853 3468999999999999999999998 89999999999999987776 999999999876
Q ss_pred cccccc------cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCC
Q 002358 762 EEDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD 835 (931)
Q Consensus 762 ~~~~~~------~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~ 835 (931)
...... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..............+........
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP 241 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCcc
Confidence 543221 22345699999999999999999999999999999999999999985443333333222222211111
Q ss_pred eeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 836 VISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 836 ~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
... +... .+..+.+++.+||+.+|++||++++|++.|+++.....
T Consensus 242 ~~~-----~~~~----~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 242 LRE-----LCAG----FPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HHH-----HTTT----SCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHH-----HHhh----CcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 111 1111 22468899999999999999999999999999876543
No 45
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=8.5e-39 Score=347.99 Aligned_cols=261 Identities=25% Similarity=0.397 Sum_probs=199.7
Q ss_pred HHHHHhhccccCccCcEEEEEEEECC----CcEEEEEEccCccc-hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEE
Q 002358 607 EEATNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 681 (931)
Q Consensus 607 ~~~~~~~~~~LG~G~fG~Vy~a~~~~----g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~ 681 (931)
....|++.+.||+|+||.||+|.+.. +..||+|+++.... ...+.+.+|+.++++++||||+++++++. ++..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 34567788999999999999998753 45799999876433 34567999999999999999999999985 45688
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccc
Q 002358 682 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 761 (931)
Q Consensus 682 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~ 761 (931)
+||||+++|+|.+++... ...+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 92 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp EEEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECcccccccc
Confidence 999999999999999753 3468999999999999999999998 89999999999999999999999999999876
Q ss_pred cccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeecc
Q 002358 762 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 840 (931)
Q Consensus 762 ~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~ 840 (931)
............+++.|+|||.+....++.++||||||+++|||++ |..||......+ ....+ ..+....
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~---~~~~i----~~~~~~~-- 237 (281)
T 1mp8_A 167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIGRI----ENGERLP-- 237 (281)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHH----HTTCCCC--
T ss_pred CcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH---HHHHH----HcCCCCC--
Confidence 5443333334457789999999988889999999999999999997 999997443322 22211 1111111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 841 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 841 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
. +......+.+++.+||+.+|++||+++|+++.|+++...++
T Consensus 238 ---~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 279 (281)
T 1mp8_A 238 ---M----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279 (281)
T ss_dssp ---C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ---C----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence 1 11223468899999999999999999999999999877653
No 46
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.7e-38 Score=351.40 Aligned_cols=261 Identities=19% Similarity=0.235 Sum_probs=210.4
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhc-CCCCCcceeEEEecCCeEEEEEEec
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYM 687 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~~~~lV~E~~ 687 (931)
.|++.+.||+|+||.||+|+.. +|+.||||++.... ..+.+.+|+++++++ +||||+++++++...+..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (330)
T 2izr_A 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL 87 (330)
T ss_dssp TEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred CeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence 4567899999999999999974 78999999986542 235688999999999 8999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCc-----eEEeccccccccc
Q 002358 688 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR-----AKVSDFGLSRQAE 762 (931)
Q Consensus 688 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~-----vkL~DFGla~~~~ 762 (931)
+++|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++. +||+|||+++...
T Consensus 88 -~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 88 -GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp -CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred -CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99999999853 4579999999999999999999998 89999999999999998887 9999999998754
Q ss_pred ccccc------cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCe
Q 002358 763 EDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 836 (931)
Q Consensus 763 ~~~~~------~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 836 (931)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+.........
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 241 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPI 241 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCH
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCH
Confidence 43221 123456999999999999999999999999999999999999999855433333332222211111100
Q ss_pred eecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 837 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 837 ~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
..+.. ..+ .+.+++.+||+.+|.+||++++|++.|+++....
T Consensus 242 -----~~~~~----~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 242 -----EVLCE----NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp -----HHHTT----TCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -----HHHhc----cCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 00000 112 6889999999999999999999999999877543
No 47
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=3.3e-38 Score=353.12 Aligned_cols=246 Identities=24% Similarity=0.359 Sum_probs=202.2
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc---chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
.+++.+.||+|+||.||+|+.+ +|+.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 6 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E 85 (337)
T 1o6l_A 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME 85 (337)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred HeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEe
Confidence 4567899999999999999987 68999999987532 2344678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 86 ~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 86 YANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp CCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 9999999999874 4568999999999999999999998 899999999999999999999999999998643322
Q ss_pred cccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccccccc
Q 002358 766 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 845 (931)
Q Consensus 766 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 845 (931)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .+.+ .+..+.. .+
T Consensus 160 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~----~i~~~~~------~~- 224 (337)
T 1o6l_A 160 A-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---RLFE----LILMEEI------RF- 224 (337)
T ss_dssp C-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHCCC------CC-
T ss_pred C-cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH---HHHH----HHHcCCC------CC-
Confidence 2 233456999999999999999999999999999999999999999743321 1111 1111111 11
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 002358 846 GNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVL 879 (931)
Q Consensus 846 ~~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~ 879 (931)
+......+.+++.+||+.||++|| +++||++
T Consensus 225 ---p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 225 ---PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp ---CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ---CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 111223678999999999999999 8999875
No 48
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.7e-38 Score=342.08 Aligned_cols=256 Identities=29% Similarity=0.456 Sum_probs=210.8
Q ss_pred HHHhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEecC
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 688 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 688 (931)
..+++.+.||+|+||.||+|.+.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 35667899999999999999998899999999976533 34678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccccc
Q 002358 689 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 768 (931)
Q Consensus 689 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~~~ 768 (931)
+++|.+++... ...+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++..........
T Consensus 87 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 161 (267)
T 3t9t_A 87 HGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 161 (267)
T ss_dssp TCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred CCcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccccccccccc
Confidence 99999999753 3568899999999999999999998 899999999999999999999999999998764433222
Q ss_pred ccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccCC
Q 002358 769 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 847 (931)
Q Consensus 769 ~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~ 847 (931)
.....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ..... +..+.. .. .
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~~----i~~~~~--~~---~--- 226 (267)
T 3t9t_A 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS---EVVED----ISTGFR--LY---K--- 226 (267)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHHH----HHTTCC--CC---C---
T ss_pred cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH---HHHHH----HhcCCc--CC---C---
Confidence 333457789999999988889999999999999999999 89999743221 11111 111111 00 0
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 002358 848 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 886 (931)
Q Consensus 848 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 886 (931)
+......+.+++.+||+.+|++||+++|+++.|+++..
T Consensus 227 -~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 227 -PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp -CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11122367899999999999999999999999998865
No 49
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.8e-38 Score=348.60 Aligned_cols=261 Identities=22% Similarity=0.287 Sum_probs=199.9
Q ss_pred HHHhhccccCccCcEEEEEEEECCCcEEEEEEccCccc--hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEe
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
..|++.+.||+|+||+||+|+.++|+.||+|++..... ...+.+.+|++++++++||||+++++++.++...++||||
T Consensus 21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 100 (311)
T 3niz_A 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEF 100 (311)
T ss_dssp CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEEC
T ss_pred hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcC
Confidence 34667899999999999999998899999999875432 2346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccc
Q 002358 687 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 766 (931)
Q Consensus 687 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~ 766 (931)
++ |+|.+.+.. ....+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++.......
T Consensus 101 ~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 174 (311)
T 3niz_A 101 ME-KDLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR 174 (311)
T ss_dssp CS-EEHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC
T ss_pred CC-CCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc
Confidence 98 488888764 34568999999999999999999998 8999999999999999999999999999987643322
Q ss_pred ccccccccCCCccCCCccCC-CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCC---eee----
Q 002358 767 HISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD---VIS---- 838 (931)
Q Consensus 767 ~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~---~~~---- 838 (931)
. .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+... .+........ ...
T Consensus 175 ~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~ 250 (311)
T 3niz_A 175 S-YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLP---KIFSILGTPNPREWPQVQEL 250 (311)
T ss_dssp ----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHH---HHHHHHCCCCTTTSGGGTTS
T ss_pred c-ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHH---HHHHHHCCCChHHhhhhhcc
Confidence 2 233458999999999876 568999999999999999999999997544332221 1111111100 000
Q ss_pred ---------cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 839 ---------IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 839 ---------i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
..+.............++.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred chhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000000000111236789999999999999999999875
No 50
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.3e-38 Score=348.38 Aligned_cols=262 Identities=29% Similarity=0.515 Sum_probs=203.5
Q ss_pred HHHhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEecC
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 688 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 688 (931)
..+++.+.||+|+||.||+|++. ++.||+|++... ...+.+.+|++++++++||||+++++++.+ ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 34567899999999999999986 789999998643 345789999999999999999999998874 4789999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCc-eEEecccccccccccccc
Q 002358 689 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR-AKVSDFGLSRQAEEDLTH 767 (931)
Q Consensus 689 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~-vkL~DFGla~~~~~~~~~ 767 (931)
+|+|.+++........+++..++.++.|+++||+|||+....+|+||||||+|||++.++. +||+|||++.......
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~-- 160 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM-- 160 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc--
Confidence 9999999986433345788999999999999999999744468999999999999998886 7999999997654321
Q ss_pred cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccCC
Q 002358 768 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 847 (931)
Q Consensus 768 ~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~ 847 (931)
....||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .... .|. ...+... .....
T Consensus 161 --~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~-~~~---~~~~~~~-----~~~~~ 228 (307)
T 2eva_A 161 --TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP-AFRI-MWA---VHNGTRP-----PLIKN 228 (307)
T ss_dssp ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS-HHHH-HHH---HHTTCCC-----CCBTT
T ss_pred --ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc-HHHH-HHH---HhcCCCC-----Ccccc
Confidence 2235899999999999999999999999999999999999999733221 1111 111 1111111 11112
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcCCCC
Q 002358 848 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGGDQ 893 (931)
Q Consensus 848 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~ 893 (931)
. ...+.+++.+||+.+|++|||++|+++.|+++.........
T Consensus 229 ~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~ 270 (307)
T 2eva_A 229 L----PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADE 270 (307)
T ss_dssp C----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTS
T ss_pred c----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCC
Confidence 2 23678999999999999999999999999998876654443
No 51
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.2e-38 Score=347.41 Aligned_cols=263 Identities=29% Similarity=0.450 Sum_probs=216.8
Q ss_pred hHHHHHHhhccccCccCcEEEEEEEECC-CcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEE
Q 002358 605 ELEEATNNFCKKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 683 (931)
Q Consensus 605 ~l~~~~~~~~~~LG~G~fG~Vy~a~~~~-g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV 683 (931)
++....+++.+.||+|+||.||+|.++. ++.||+|++... ....+.+.+|++++++++||||+++++++.+....++|
T Consensus 9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 3445667788999999999999999874 889999998754 33457899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccc
Q 002358 684 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 763 (931)
Q Consensus 684 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~ 763 (931)
|||+++++|.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 88 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 163 (288)
T 3kfa_A 88 TEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163 (288)
T ss_dssp EECCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred EEcCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence 9999999999999754 34568999999999999999999998 8999999999999999999999999999987655
Q ss_pred cccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeecccc
Q 002358 764 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 842 (931)
Q Consensus 764 ~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~ 842 (931)
..........+++.|+|||.+.+..++.++||||||+++|+|++ |..||...+... ..+.+. .... .
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~---~~~~~~----~~~~-----~ 231 (288)
T 3kfa_A 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLE----KDYR-----M 231 (288)
T ss_dssp SSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHHHH----TTCC-----C
T ss_pred CccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHh----ccCC-----C
Confidence 44434444557889999999988899999999999999999999 999997443322 122111 1110 0
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 843 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 843 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
..+......+.+++.+||+.+|++||+++|+++.|+++....
T Consensus 232 ----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 232 ----ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 111122346889999999999999999999999999877543
No 52
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.8e-39 Score=363.68 Aligned_cols=266 Identities=27% Similarity=0.452 Sum_probs=212.3
Q ss_pred hHHHHHHhhccccCccCcEEEEEEEEC------CCcEEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEecC
Q 002358 605 ELEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE 677 (931)
Q Consensus 605 ~l~~~~~~~~~~LG~G~fG~Vy~a~~~------~g~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~ 677 (931)
++....+++.+.||+|+||.||+|++. +++.||||+++... .....++.+|+.++++++||||+++++++...
T Consensus 67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~ 146 (367)
T 3l9p_A 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146 (367)
T ss_dssp BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 444556778899999999999999854 46789999997543 34456799999999999999999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhccCC----CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCC---ce
Q 002358 678 HQRILVYEYMHNGTLRDRLHGSV----NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM---RA 750 (931)
Q Consensus 678 ~~~~lV~E~~~~gsL~~~L~~~~----~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~---~v 750 (931)
...++||||+++|+|.+++.... ....+++..++.++.||++||+|||+ .+|+||||||+|||++.++ .+
T Consensus 147 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~ 223 (367)
T 3l9p_A 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVA 223 (367)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceE
Confidence 99999999999999999987532 23468999999999999999999998 8999999999999999555 59
Q ss_pred EEecccccccccccc-cccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHH
Q 002358 751 KVSDFGLSRQAEEDL-THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWAR 828 (931)
Q Consensus 751 kL~DFGla~~~~~~~-~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~ 828 (931)
||+|||+++...... ........||+.|+|||++.+..++.++|||||||++|||++ |..||...... .+...
T Consensus 224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~---~~~~~-- 298 (367)
T 3l9p_A 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ---EVLEF-- 298 (367)
T ss_dssp EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHHH--
T ss_pred EECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHH--
Confidence 999999998653322 122233457899999999988899999999999999999998 99999743321 12221
Q ss_pred HhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 829 SMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 829 ~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
+..+.... .+......+.+++.+||+.+|++||+++||++.|+.+.....
T Consensus 299 --i~~~~~~~---------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 299 --VTSGGRMD---------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp --HHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred --HHcCCCCC---------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 22221111 111223368899999999999999999999999998876543
No 53
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=5.8e-39 Score=373.87 Aligned_cols=260 Identities=27% Similarity=0.435 Sum_probs=205.7
Q ss_pred HHHHHhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEe
Q 002358 607 EEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 607 ~~~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
....+++.+.||+|+||.||+|.++++..||||+++... ...++|.+|+++|++++||||+++++++.+ +..++||||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 344567789999999999999999988899999997643 234679999999999999999999999876 678999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccc
Q 002358 687 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 766 (931)
Q Consensus 687 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~ 766 (931)
+++|+|.+++... ....+++..++.++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 260 ~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 335 (452)
T 1fmk_A 260 MSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335 (452)
T ss_dssp CTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred hcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence 9999999999742 23458899999999999999999998 8999999999999999999999999999987654333
Q ss_pred ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeeccccccc
Q 002358 767 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 845 (931)
Q Consensus 767 ~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 845 (931)
.......+++.|+|||.+....++.++||||||+++|||++ |+.||...... .... .+..+...
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~---~~~~----~i~~~~~~-------- 400 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EVLD----QVERGYRM-------- 400 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHH----HHHTTCCC--------
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHHcCCCC--------
Confidence 23333457889999999988899999999999999999999 99999743221 1111 12222110
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 846 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 846 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
..+...+..+.+++.+||+.+|++|||+++|++.|+++....
T Consensus 401 -~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 401 -PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp -CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred -CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 111223346889999999999999999999999999876543
No 54
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.3e-38 Score=370.66 Aligned_cols=254 Identities=30% Similarity=0.486 Sum_probs=206.8
Q ss_pred HHHHhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCC-eEEEEEEe
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH-QRILVYEY 686 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~-~~~lV~E~ 686 (931)
...+++.+.||+|+||.||+|.++ |+.||||+++... ..+.|.+|+++|++++||||+++++++.... ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 345667899999999999999987 7899999997643 4578999999999999999999999987655 78999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccc
Q 002358 687 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 766 (931)
Q Consensus 687 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~ 766 (931)
+++|+|.+++... ....+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 269 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 343 (450)
T 1k9a_A 269 MAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 343 (450)
T ss_dssp CTTCBHHHHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred cCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc-
Confidence 9999999999853 23347899999999999999999998 899999999999999999999999999998543221
Q ss_pred ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeeccccccc
Q 002358 767 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 845 (931)
Q Consensus 767 ~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 845 (931)
....+++.|+|||.+.+..++.++|||||||++|||++ |+.||......+ ... .+..+...
T Consensus 344 ---~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~~----~i~~~~~~-------- 405 (450)
T 1k9a_A 344 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVP----RVEKGYKM-------- 405 (450)
T ss_dssp ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---HHH----HHHTTCCC--------
T ss_pred ---cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH----HHHcCCCC--------
Confidence 22347889999999999999999999999999999999 999997443322 111 12222111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 846 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 846 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
..+...+..+.+++.+||+.+|++|||++||++.|+++...+
T Consensus 406 -~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~ 447 (450)
T 1k9a_A 406 -DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447 (450)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred -CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence 111222347889999999999999999999999999886543
No 55
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.3e-39 Score=354.44 Aligned_cols=267 Identities=24% Similarity=0.402 Sum_probs=208.1
Q ss_pred hHHHHHHhhccccCccCcEEEEEEEE-----CCCcEEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEecC-
Q 002358 605 ELEEATNNFCKKIGKGSFGSVYYGKM-----KDGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE- 677 (931)
Q Consensus 605 ~l~~~~~~~~~~LG~G~fG~Vy~a~~-----~~g~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~- 677 (931)
.+....+++.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|++++++++||||+++++++...
T Consensus 17 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (302)
T 4e5w_A 17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96 (302)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--
T ss_pred hhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC
Confidence 34445577789999999999999985 368899999987543 23446789999999999999999999999876
Q ss_pred -CeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccc
Q 002358 678 -HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFG 756 (931)
Q Consensus 678 -~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFG 756 (931)
...++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 97 ~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg 171 (302)
T 4e5w_A 97 GNGIKLIMEFLPSGSLKEYLPK--NKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFG 171 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHH--HTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred CceEEEEEEeCCCCcHHHHHHh--ccccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECccc
Confidence 668999999999999999964 24568999999999999999999998 899999999999999999999999999
Q ss_pred cccccccccc--ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCc--------cchhhHHHH
Q 002358 757 LSRQAEEDLT--HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDF--------GAELNIVHW 826 (931)
Q Consensus 757 la~~~~~~~~--~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~--------~~~~~l~~~ 826 (931)
++........ .......||..|+|||.+.+..++.++||||||+++|||++|..|+..... .........
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 251 (302)
T 4e5w_A 172 LTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR 251 (302)
T ss_dssp TCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHH
T ss_pred ccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHH
Confidence 9987654332 223344578889999999998999999999999999999999998752210 000011111
Q ss_pred HHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 002358 827 ARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSI 885 (931)
Q Consensus 827 ~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 885 (931)
....+..+... ..+......+.+++.+||+.||++|||++|+++.|++++
T Consensus 252 ~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 252 LVNTLKEGKRL---------PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHHTTCCC---------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhccCCC---------CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 11122211111 112223346889999999999999999999999999875
No 56
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.7e-38 Score=350.60 Aligned_cols=262 Identities=26% Similarity=0.421 Sum_probs=212.2
Q ss_pred HHHHHhhccccCccCcEEEEEEEEC------CCcEEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCe
Q 002358 607 EEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 679 (931)
Q Consensus 607 ~~~~~~~~~~LG~G~fG~Vy~a~~~------~g~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~ 679 (931)
....|.+.+.||+|+||.||+|.+. +++.||||+++... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 3455677899999999999999862 45889999997643 3445789999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCC---------------------CCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCC
Q 002358 680 RILVYEYMHNGTLRDRLHGSVN---------------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVK 738 (931)
Q Consensus 680 ~~lV~E~~~~gsL~~~L~~~~~---------------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIk 738 (931)
.++||||+++|+|.+++..... ...+++..++.++.|+++||+|||+ .+|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccc
Confidence 9999999999999999975432 2348899999999999999999998 899999999
Q ss_pred CCCccccCCCceEEecccccccccccccc-cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccC
Q 002358 739 SSNILLDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVED 816 (931)
Q Consensus 739 p~NILld~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~ 816 (931)
|+|||++.++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999865443222 2233457889999999998899999999999999999999 999997443
Q ss_pred ccchhhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 002358 817 FGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 887 (931)
Q Consensus 817 ~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 887 (931)
... +... +..+.... .+......+.+++.+||+.||++||+++|+++.|+++...
T Consensus 258 ~~~---~~~~----~~~~~~~~---------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 258 PER---LFNL----LKTGHRME---------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp GGG---HHHH----HHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHH---HHHH----hhcCCcCC---------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 322 1111 11111111 1112234688999999999999999999999999988654
No 57
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.7e-38 Score=351.87 Aligned_cols=250 Identities=24% Similarity=0.374 Sum_probs=200.0
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc-hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEec
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 687 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 687 (931)
.|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 8 ~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 87 (323)
T 3tki_A 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC 87 (323)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred hceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcC
Confidence 4567899999999999999987 789999999864432 33467899999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc-c
Q 002358 688 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL-T 766 (931)
Q Consensus 688 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~-~ 766 (931)
++|+|.+++. ....+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++...... .
T Consensus 88 ~~~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 88 SGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp TTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred CCCcHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 9999999987 34569999999999999999999998 899999999999999999999999999998654322 2
Q ss_pred ccccccccCCCccCCCccCCCCC-CccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccccccc
Q 002358 767 HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 845 (931)
Q Consensus 767 ~~~~~~~gt~~y~APE~l~~~~~-s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 845 (931)
.......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... ......|..... . ..+
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~~~~~~~~----~---~~~--- 230 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS-CQEYSDWKEKKT----Y---LNP--- 230 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT-SHHHHHHHTTCT----T---STT---
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH-HHHHHHHhcccc----c---CCc---
Confidence 22334569999999999987765 77999999999999999999999743322 122222221110 0 000
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 846 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 846 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.......+.+++.+||+.||++|||++|+++
T Consensus 231 ---~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 231 ---WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp ---GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---cccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0112235779999999999999999999875
No 58
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4e-38 Score=347.80 Aligned_cols=265 Identities=31% Similarity=0.505 Sum_probs=204.6
Q ss_pred hHHHHHHhhccccCccCcEEEEEEEECCCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEE
Q 002358 605 ELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 682 (931)
Q Consensus 605 ~l~~~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~l 682 (931)
++....+.+.+.||+|+||.||+|++. ..+|+|+++... ....+.+.+|++++++++||||+++++++.. +..++
T Consensus 32 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~l 108 (307)
T 3lb7_A 32 EIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI 108 (307)
T ss_dssp BCCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred EecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEE
Confidence 445566778899999999999999875 368999887532 3345789999999999999999999998764 55789
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccc
Q 002358 683 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 762 (931)
Q Consensus 683 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~ 762 (931)
||||+++|+|.+++... ...+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 109 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~ 183 (307)
T 3lb7_A 109 VTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp EEECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred EEecCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence 99999999999999743 4568999999999999999999998 899999999999999999999999999998644
Q ss_pred cc-ccccccccccCCCccCCCccC---CCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeee
Q 002358 763 ED-LTHISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 838 (931)
Q Consensus 763 ~~-~~~~~~~~~gt~~y~APE~l~---~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 838 (931)
.. .........||+.|+|||++. +..++.++||||||+++|||++|+.||......+ .... .+..+...
T Consensus 184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~--~~~~----~~~~~~~~- 256 (307)
T 3lb7_A 184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD--QIIF----MVGRGYAS- 256 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--HHHH----HHHHTCCC-
T ss_pred cccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH--HHHH----HHhcCCCC-
Confidence 31 122223446899999999985 6678899999999999999999999997433221 1111 11111111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 839 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 839 i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
+.+. .........+.+++.+||+.+|++||+++||++.|+.+....
T Consensus 257 ---~~~~-~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 257 ---PDLS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp ---CCST-TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred ---cchh-hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 1110 111122346889999999999999999999999999886544
No 59
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1e-37 Score=352.48 Aligned_cols=250 Identities=24% Similarity=0.322 Sum_probs=203.4
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccch------hhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 681 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~------~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~ 681 (931)
..|++.+.||+|+||.||+|..+ +|+.||+|+++..... ..+.+.+|+.++++++||||+++++++.+....+
T Consensus 12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 91 (361)
T 2yab_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVV 91 (361)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEE
Confidence 34667899999999999999987 6899999998754322 2467899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCC----ceEEecccc
Q 002358 682 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFGL 757 (931)
Q Consensus 682 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~----~vkL~DFGl 757 (931)
+||||+++|+|.+++.. ...+++..+..++.||+.||.|||+ .+|+||||||+|||++.++ .+||+|||+
T Consensus 92 lv~e~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 92 LILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEECCCSCBHHHHHTT---CSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 99999999999999973 4579999999999999999999998 8999999999999998776 799999999
Q ss_pred cccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCee
Q 002358 758 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 837 (931)
Q Consensus 758 a~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~ 837 (931)
++....... .....||+.|+|||++.+..++.++|||||||++|+|++|..||....... ... .+..+...
T Consensus 166 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~---~~~----~i~~~~~~ 236 (361)
T 2yab_A 166 AHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE---TLA----NITAVSYD 236 (361)
T ss_dssp CEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH---HHH----HHHTTCCC
T ss_pred ceEcCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH---HHH----HHHhcCCC
Confidence 987654321 234569999999999999999999999999999999999999997433211 111 11111110
Q ss_pred ecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 838 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 838 ~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.++...... ...+.+++.+||+.||++|||++|+++
T Consensus 237 --~~~~~~~~~----s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 237 --FDEEFFSQT----SELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp --CCHHHHTTS----CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --CCchhccCC----CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111111 235789999999999999999999884
No 60
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-38 Score=353.88 Aligned_cols=262 Identities=27% Similarity=0.445 Sum_probs=210.6
Q ss_pred HHHHhhccccCccCcEEEEEEEEC------CCcEEEEEEccCccc-hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeE
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 680 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~------~g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~ 680 (931)
...+++.+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 125 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 125 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCce
Confidence 345667889999999999999985 348899999976533 3456799999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCC---------------------CCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCC
Q 002358 681 ILVYEYMHNGTLRDRLHGSVN---------------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKS 739 (931)
Q Consensus 681 ~lV~E~~~~gsL~~~L~~~~~---------------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp 739 (931)
++||||+++|+|.+++..... ...+++..++.++.||++||+|||+ .+|+||||||
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp 202 (343)
T 1luf_A 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLAT 202 (343)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSG
T ss_pred EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCc
Confidence 999999999999999975321 2568999999999999999999998 8999999999
Q ss_pred CCccccCCCceEEeccccccccccccc-ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCc
Q 002358 740 SNILLDINMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDF 817 (931)
Q Consensus 740 ~NILld~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~ 817 (931)
+|||++.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 282 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 282 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh
Confidence 999999999999999999986543322 22233457899999999988889999999999999999999 9999974322
Q ss_pred cchhhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 818 GAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 818 ~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
. ... ..+..+..... +......+.+++.+||+.+|++||+++||++.|+++....
T Consensus 283 ~---~~~----~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 283 E---EVI----YYVRDGNILAC---------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp H---HHH----HHHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred H---HHH----HHHhCCCcCCC---------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 1 111 12222222111 1122346889999999999999999999999999886544
No 61
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=5.4e-38 Score=353.52 Aligned_cols=256 Identities=23% Similarity=0.310 Sum_probs=204.5
Q ss_pred HHHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc-----chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCe
Q 002358 606 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-----SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 679 (931)
Q Consensus 606 l~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~-----~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~ 679 (931)
+....|++.+.||+|+||.||+|..+ +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 100 (351)
T 3c0i_A 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGM 100 (351)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 44677889999999999999999886 68999999985421 1135678999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCc---eEEecc
Q 002358 680 RILVYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDF 755 (931)
Q Consensus 680 ~~lV~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~---vkL~DF 755 (931)
.++||||+++|+|.+.+.... ....+++..+..++.||++||+|||+ .+|+||||||+|||++.++. +||+||
T Consensus 101 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Df 177 (351)
T 3c0i_A 101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGF 177 (351)
T ss_dssp EEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCC
T ss_pred EEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecC
Confidence 999999999999988775432 34458999999999999999999998 89999999999999986655 999999
Q ss_pred cccccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCC
Q 002358 756 GLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD 835 (931)
Q Consensus 756 Gla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~ 835 (931)
|+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+.. .+..+.
T Consensus 178 g~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~~----~i~~~~ 248 (351)
T 3c0i_A 178 GVAIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK----ERLFE----GIIKGK 248 (351)
T ss_dssp TTCEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH----HHHHH----HHHHTC
T ss_pred cceeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH----HHHHH----HHHcCC
Confidence 99987654322 2234469999999999999999999999999999999999999997421 11111 111111
Q ss_pred eeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 836 VISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 836 ~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.. ..+...... ...+.+++.+||+.||++||++.|+++
T Consensus 249 ~~--~~~~~~~~~----s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 249 YK--MNPRQWSHI----SESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CC--CCHHHHTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CC--CCccccccC----CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 10 011111111 236789999999999999999999985
No 62
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=6e-38 Score=354.65 Aligned_cols=255 Identities=23% Similarity=0.325 Sum_probs=206.3
Q ss_pred hhHHHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeE
Q 002358 604 PELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 680 (931)
Q Consensus 604 ~~l~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~ 680 (931)
.......|++.+.||+|+||.||+|..+ +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 24 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~ 103 (362)
T 2bdw_A 24 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFH 103 (362)
T ss_dssp CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred CCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE
Confidence 3445677888999999999999999986 68999999986542 23456789999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCC---CceEEecccc
Q 002358 681 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN---MRAKVSDFGL 757 (931)
Q Consensus 681 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~---~~vkL~DFGl 757 (931)
++||||+++|+|.+.+.. ...+++..+..++.||++||+|||+ .+|+||||||+|||++.+ +.+||+|||+
T Consensus 104 ~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~ 177 (362)
T 2bdw_A 104 YLVFDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGL 177 (362)
T ss_dssp EEEECCCCSCBHHHHHTT---CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEEecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCc
Confidence 999999999999999873 4568999999999999999999998 899999999999999865 4599999999
Q ss_pred cccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCee
Q 002358 758 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 837 (931)
Q Consensus 758 a~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~ 837 (931)
+........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .+... +..+...
T Consensus 178 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~---~~~~~----i~~~~~~ 248 (362)
T 2bdw_A 178 AIEVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLYAQ----IKAGAYD 248 (362)
T ss_dssp CBCCTTCCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHH----HHHTCCC
T ss_pred ceEecCCcc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---HHHHH----HHhCCCC
Confidence 987653322 23356999999999999999999999999999999999999999743321 12211 1122111
Q ss_pred ecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 838 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 838 ~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
...+ ... .....+.+++.+||+.||++||+++|+++
T Consensus 249 -~~~~-~~~----~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 249 -YPSP-EWD----TVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp -CCTT-GGG----GSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -CCcc-ccc----CCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0000 001 12236789999999999999999999875
No 63
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.1e-38 Score=355.43 Aligned_cols=259 Identities=23% Similarity=0.412 Sum_probs=202.3
Q ss_pred HHHHHhhccccCccCcEEEEEEEEC-CCc----EEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeE
Q 002358 607 EEATNNFCKKIGKGSFGSVYYGKMK-DGK----EVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 680 (931)
Q Consensus 607 ~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~----~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~ 680 (931)
....|++.+.||+|+||.||+|++. +++ .||+|.++... ....+.+.+|++++++++||||+++++++.+.. .
T Consensus 13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~ 91 (327)
T 3poz_A 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-E
T ss_pred CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-e
Confidence 3455677899999999999999975 344 46888876433 234578999999999999999999999998765 7
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccc
Q 002358 681 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 760 (931)
Q Consensus 681 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~ 760 (931)
++|+||+++|+|.+++... ...+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 92 ~~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 8999999999999999753 4568999999999999999999998 8999999999999999999999999999987
Q ss_pred ccccccc-cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeee
Q 002358 761 AEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVIS 838 (931)
Q Consensus 761 ~~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 838 (931)
....... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||....... +.. .+..+...
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~----~~~~~~~~- 238 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISS----ILEKGERL- 238 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH----HHHTTCCC-
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---HHH----HHHcCCCC-
Confidence 5443222 2223346889999999999999999999999999999999 999997443322 111 11111111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 002358 839 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 887 (931)
Q Consensus 839 i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 887 (931)
..+......+.+++.+||+.+|++||+++|+++.|+.+...
T Consensus 239 --------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 239 --------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp --------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred --------CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 11122234688999999999999999999999999987653
No 64
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=3.9e-39 Score=358.75 Aligned_cols=268 Identities=25% Similarity=0.372 Sum_probs=210.9
Q ss_pred HHHHhhccccCccCcEEEEEEEE-----CCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEe--cCCeE
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKM-----KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCE--EEHQR 680 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~-----~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~~ 680 (931)
...+++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. +....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 35677789999999999999985 358899999998776666778999999999999999999999886 45668
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccc
Q 002358 681 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 760 (931)
Q Consensus 681 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~ 760 (931)
++||||+++|+|.+++... ...+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 102 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred EEEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEccccccee
Confidence 9999999999999999742 3458999999999999999999998 8999999999999999999999999999987
Q ss_pred cccccc--ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccc--------hhhHHHHHHHh
Q 002358 761 AEEDLT--HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA--------ELNIVHWARSM 830 (931)
Q Consensus 761 ~~~~~~--~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~--------~~~l~~~~~~~ 830 (931)
...... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||....... .......+...
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL 256 (327)
T ss_dssp CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 643322 12233457888999999998889999999999999999999999986322110 00001111111
Q ss_pred hhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 831 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 831 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
+..+. ....+......+.+++.+||+.||++|||++|+++.|+.+.....
T Consensus 257 ~~~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 257 LEEGQ---------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp HHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred hhccc---------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 11111 111122333468899999999999999999999999998876554
No 65
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.3e-38 Score=348.29 Aligned_cols=251 Identities=23% Similarity=0.304 Sum_probs=204.0
Q ss_pred HHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccch------hhhhHHHHHHHHHhcCCCCCcceeEEEecCCeE
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 680 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~------~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~ 680 (931)
...|++.+.||+|+||.||+|..+ +|+.||+|++...... ..+.+.+|+.++++++||||+++++++.+....
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 456788999999999999999987 6899999998654321 346799999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCC----ceEEeccc
Q 002358 681 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFG 756 (931)
Q Consensus 681 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~----~vkL~DFG 756 (931)
++||||+++|+|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 999999999999999973 4578999999999999999999998 8999999999999998877 79999999
Q ss_pred ccccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCe
Q 002358 757 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 836 (931)
Q Consensus 757 la~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 836 (931)
+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+. ....
T Consensus 164 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~~~----~~~~ 234 (326)
T 2y0a_A 164 LAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE---TLANVS----AVNY 234 (326)
T ss_dssp TCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH---HHHHHH----HTCC
T ss_pred CCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH---HHHHHH----hcCC
Confidence 9987643221 233468999999999999999999999999999999999999997433211 111111 1110
Q ss_pred eecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 837 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 837 ~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
. ..+..... ....+.+++.+||+.||++|||++|+++
T Consensus 235 -~-~~~~~~~~----~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 235 -E-FEDEYFSN----TSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp -C-CCHHHHTT----SCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -C-cCcccccc----CCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 00001111 1236789999999999999999999986
No 66
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=7.9e-38 Score=341.04 Aligned_cols=254 Identities=31% Similarity=0.517 Sum_probs=202.3
Q ss_pred HHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchh-------hhhHHHHHHHHHhcCCCCCcceeEEEecCC
Q 002358 607 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHR-------TQQFVTEVALLSRIHHRNLVPLIGYCEEEH 678 (931)
Q Consensus 607 ~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~-------~~~~~~E~~il~~l~HpnIv~l~g~~~~~~ 678 (931)
....|++.+.||+|+||.||+|++. +++.||+|++....... .+.+.+|++++++++||||+++++++.+..
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP 96 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC
Confidence 3455777899999999999999985 78999999986532211 167899999999999999999999997665
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCC--eEecCCCCCCccccCCCc-----eE
Q 002358 679 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMR-----AK 751 (931)
Q Consensus 679 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~--ivH~DIkp~NILld~~~~-----vk 751 (931)
++||||+++|+|.+.+.. ....+++..++.++.|+++||+|||+ .+ |+||||||+|||++.++. +|
T Consensus 97 --~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 --RMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp --EEEEECCTTCBHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred --eEEEEecCCCCHHHHHhc--ccCCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEE
Confidence 699999999999998864 34578999999999999999999998 77 999999999999988776 99
Q ss_pred EecccccccccccccccccccccCCCccCCCcc--CCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHH
Q 002358 752 VSDFGLSRQAEEDLTHISSVARGTVGYLDPEYY--GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS 829 (931)
Q Consensus 752 L~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l--~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~ 829 (931)
|+|||+++..... .....||+.|+|||.+ ....++.++||||||+++|||++|+.||........ ......
T Consensus 170 l~Dfg~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~-- 242 (287)
T 4f0f_A 170 VADFGLSQQSVHS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI-KFINMI-- 242 (287)
T ss_dssp ECCCTTCBCCSSC----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH-HHHHHH--
T ss_pred eCCCCcccccccc----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH-HHHHHH--
Confidence 9999999754332 2334689999999998 455678999999999999999999999974433221 111111
Q ss_pred hhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 002358 830 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDS 884 (931)
Q Consensus 830 ~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 884 (931)
...+.. +.+ +......+.+++.+||+.||++||+++|+++.|+++
T Consensus 243 -~~~~~~-----~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 243 -REEGLR-----PTI----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp -HHSCCC-----CCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred -hccCCC-----CCC----CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 111111 111 122234688999999999999999999999999863
No 67
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2e-38 Score=344.31 Aligned_cols=261 Identities=26% Similarity=0.433 Sum_probs=210.9
Q ss_pred HHHHHhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEe
Q 002358 607 EEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 607 ~~~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
....+++.+.||+|+||.||+|..++++.||+|+++... ...+.+.+|++++++++||||+++++++.. +..++||||
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 88 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY 88 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEec
Confidence 345677889999999999999999988899999987543 235679999999999999999999999874 458999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccc
Q 002358 687 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 766 (931)
Q Consensus 687 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~ 766 (931)
+++++|.+++... ....+++..++.++.|+++||+|||+ .+++||||||+||++++++.+||+|||++........
T Consensus 89 ~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 89 MENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp CTTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred CCCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 9999999998742 12368899999999999999999998 8999999999999999999999999999987654433
Q ss_pred ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeeccccccc
Q 002358 767 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 845 (931)
Q Consensus 767 ~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 845 (931)
.......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ...+. +..+.. ...
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~~----~~~~~~-----~~~- 231 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP---EVIQN----LERGYR-----MVR- 231 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHHH----HHTTCC-----CCC-
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH---HHHHH----HhcccC-----CCC-
Confidence 33334457889999999988889999999999999999999 99999743221 12221 111111 011
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 846 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 846 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
+......+.+++.+|++.+|++|||++++++.|+++.....
T Consensus 232 ---~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 232 ---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred ---cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 11223468899999999999999999999999999876543
No 68
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.4e-38 Score=358.60 Aligned_cols=264 Identities=27% Similarity=0.427 Sum_probs=209.8
Q ss_pred HHHHHhhccccCccCcEEEEEEEEC------CCcEEEEEEccCccc-hhhhhHHHHHHHHHhc-CCCCCcceeEEEecCC
Q 002358 607 EEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 678 (931)
Q Consensus 607 ~~~~~~~~~~LG~G~fG~Vy~a~~~------~g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~ 678 (931)
....+++.+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|+++++++ +||||+++++++.+.+
T Consensus 20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 99 (359)
T 3vhe_A 20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 99 (359)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence 3456777899999999999999843 467999999976543 3456799999999999 7999999999998755
Q ss_pred -eEEEEEEecCCCCHHHHhccCCC--------------------------------------------------------
Q 002358 679 -QRILVYEYMHNGTLRDRLHGSVN-------------------------------------------------------- 701 (931)
Q Consensus 679 -~~~lV~E~~~~gsL~~~L~~~~~-------------------------------------------------------- 701 (931)
..++||||+++|+|.+++.....
T Consensus 100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (359)
T 3vhe_A 100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 179 (359)
T ss_dssp SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence 48999999999999999975432
Q ss_pred -------CCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccc-ccccccc
Q 002358 702 -------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT-HISSVAR 773 (931)
Q Consensus 702 -------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~-~~~~~~~ 773 (931)
...+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++....... .......
T Consensus 180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 256 (359)
T 3vhe_A 180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256 (359)
T ss_dssp ----CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CE
T ss_pred ccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccC
Confidence 1228899999999999999999998 8999999999999999999999999999986543322 2233456
Q ss_pred cCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccCCCCHHH
Q 002358 774 GTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIES 852 (931)
Q Consensus 774 gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 852 (931)
||+.|+|||++.+..++.++||||||+++|||++ |+.||....... .... .+..+.... . +...
T Consensus 257 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~----~~~~~~~~~-----~----~~~~ 321 (359)
T 3vhe_A 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCR----RLKEGTRMR-----A----PDYT 321 (359)
T ss_dssp ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--HHHH----HHHHTCCCC-----C----CTTC
T ss_pred CCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH--HHHH----HHHcCCCCC-----C----CCCC
Confidence 8899999999998999999999999999999998 999997443321 1111 122221111 1 1112
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 853 IWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 853 ~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
...+.+++.+||+.+|++|||++|+++.|++++...
T Consensus 322 ~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 322 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 236789999999999999999999999999987643
No 69
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.5e-38 Score=350.77 Aligned_cols=264 Identities=29% Similarity=0.440 Sum_probs=213.0
Q ss_pred HHHHHhhccccCccCcEEEEEEEE------CCCcEEEEEEccCccc-hhhhhHHHHHHHHHhc-CCCCCcceeEEEecCC
Q 002358 607 EEATNNFCKKIGKGSFGSVYYGKM------KDGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 678 (931)
Q Consensus 607 ~~~~~~~~~~LG~G~fG~Vy~a~~------~~g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~ 678 (931)
....+++.+.||+|+||.||+|++ .+++.||+|+++.... ...+.+.+|+++++++ +||||+++++++...+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 345677889999999999999986 2468999999976543 3457799999999999 8999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCCC---------------CCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCcc
Q 002358 679 QRILVYEYMHNGTLRDRLHGSVN---------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNIL 743 (931)
Q Consensus 679 ~~~lV~E~~~~gsL~~~L~~~~~---------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NIL 743 (931)
..++||||+++|+|.+++..... ...+++..++.++.|+++||+|||+ .+|+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEE
Confidence 99999999999999999975432 2258999999999999999999998 89999999999999
Q ss_pred ccCCCceEEecccccccccccccc-cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchh
Q 002358 744 LDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAEL 821 (931)
Q Consensus 744 ld~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~ 821 (931)
++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.......
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-- 255 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-- 255 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH--
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh--
Confidence 999999999999999876544322 2233457889999999988899999999999999999999 999997443221
Q ss_pred hHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 822 NIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 822 ~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
..... +..+.. +. .+......+.+++.+||+.||++||+++|+++.|+++....
T Consensus 256 ~~~~~----~~~~~~-----~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 256 KFYKM----IKEGFR-----ML----SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp HHHHH----HHHTCC-----CC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHHH----hccCCC-----CC----CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 11111 111111 00 11122346889999999999999999999999999987643
No 70
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.5e-38 Score=352.85 Aligned_cols=262 Identities=24% Similarity=0.389 Sum_probs=208.4
Q ss_pred hhccccCccCcEEEEEEEEC-----CCcEEEEEEccCccc-hhhhhHHHHHHHHHhcCCCCCcceeEEEec--CCeEEEE
Q 002358 612 NFCKKIGKGSFGSVYYGKMK-----DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEE--EHQRILV 683 (931)
Q Consensus 612 ~~~~~LG~G~fG~Vy~a~~~-----~g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~~~lV 683 (931)
++.+.||+|+||.||++.++ +++.||||+++.... ...+.+.+|++++++++||||+++++++.+ ....++|
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 67899999999999998764 588999999976543 345679999999999999999999999987 4678999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccc
Q 002358 684 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 763 (931)
Q Consensus 684 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~ 763 (931)
|||+++|+|.+++.. ..+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 114 ~e~~~~~~L~~~l~~----~~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp ECCCTTCBHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EecccCCcHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 999999999999974 348999999999999999999998 8999999999999999999999999999987654
Q ss_pred ccc--ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccc--------hhhHHHHHHHhhhc
Q 002358 764 DLT--HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA--------ELNIVHWARSMIKK 833 (931)
Q Consensus 764 ~~~--~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~--------~~~l~~~~~~~~~~ 833 (931)
... .......+|+.|+|||.+.+..++.++||||||+++|||++|+.||....... .......+...+..
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc
Confidence 322 12233457888999999999899999999999999999999999997322110 00011111122221
Q ss_pred CCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 834 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 834 ~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
+.. ...+......+.+++.+||+.+|++|||++|+++.|+++.....
T Consensus 267 ~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 267 GER---------LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp TCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ccC---------CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 111 11122233478899999999999999999999999998876554
No 71
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.1e-38 Score=342.44 Aligned_cols=250 Identities=30% Similarity=0.431 Sum_probs=192.8
Q ss_pred HHHhhccccCccCcEEEEEEEECCCcEEEEEEccCccc----hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS----HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 684 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~----~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~ 684 (931)
..+++.+.||+|+||.||+|.+. ++.||||+++.... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 34667899999999999999986 89999999875432 23467899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCC---eEecCCCCCCccccC--------CCceEEe
Q 002358 685 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG---IIHRDVKSSNILLDI--------NMRAKVS 753 (931)
Q Consensus 685 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~---ivH~DIkp~NILld~--------~~~vkL~ 753 (931)
||+++++|.+++. ...+++..+..++.|+++||+|||+ .+ |+||||||+|||++. ++.+||+
T Consensus 86 e~~~~~~L~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~ 158 (271)
T 3dtc_A 86 EFARGGPLNRVLS----GKRIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158 (271)
T ss_dssp ECCTTEEHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred EcCCCCCHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence 9999999999986 3468999999999999999999998 66 999999999999986 7789999
Q ss_pred cccccccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhc
Q 002358 754 DFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 833 (931)
Q Consensus 754 DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~ 833 (931)
|||+++....... ....||+.|+|||.+.+..++.++||||||+++|||++|+.||...+... ... .....
T Consensus 159 Dfg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~---~~~~~ 229 (271)
T 3dtc_A 159 DFGLAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA---VAY---GVAMN 229 (271)
T ss_dssp CCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH---HHH---HHHTS
T ss_pred cCCcccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHH---hhhcC
Confidence 9999986543322 23458999999999998889999999999999999999999997432211 111 11111
Q ss_pred CCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 002358 834 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDS 884 (931)
Q Consensus 834 ~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 884 (931)
... ...+......+.+++.+||+.+|++|||++|+++.|+++
T Consensus 230 -~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 230 -KLA--------LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -CCC--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -CCC--------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 110 011122234688999999999999999999999999863
No 72
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=7.2e-38 Score=347.88 Aligned_cols=250 Identities=22% Similarity=0.340 Sum_probs=197.8
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEecCC--------
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH-------- 678 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~-------- 678 (931)
..|++.+.||+|+||.||+|+++ +|+.||||+++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 45677899999999999999987 79999999987543 335578999999999999999999999885543
Q ss_pred -------------------------------------------------eEEEEEEecCCCCHHHHhccCCCCCCCCHHH
Q 002358 679 -------------------------------------------------QRILVYEYMHNGTLRDRLHGSVNQKPLDWLT 709 (931)
Q Consensus 679 -------------------------------------------------~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~ 709 (931)
..++||||+++|+|.+++.........++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 3789999999999999998655445567778
Q ss_pred HHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccc-----------ccccccccCCCc
Q 002358 710 RLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT-----------HISSVARGTVGY 778 (931)
Q Consensus 710 ~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~-----------~~~~~~~gt~~y 778 (931)
++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++....... .......||+.|
T Consensus 166 ~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 89999999999999998 8999999999999999999999999999987654321 122334689999
Q ss_pred cCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHH
Q 002358 779 LDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAE 858 (931)
Q Consensus 779 ~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~ 858 (931)
+|||.+.+..++.++||||||+++|||++|..|+. ...... ........... .......+.+
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~-----~~~~~~----~~~~~~~~~~~---------~~~~~~~~~~ 304 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM-----ERVRII----TDVRNLKFPLL---------FTQKYPQEHM 304 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH-----HHHHHH----HHHHTTCCCHH---------HHHHCHHHHH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh-----HHHHHH----HHhhccCCCcc---------cccCChhHHH
Confidence 99999999999999999999999999999877653 111111 11111111110 1122335689
Q ss_pred HHHHccccCCCCCCCHHHHHH
Q 002358 859 VAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 859 li~~Cl~~dP~~RPs~~evl~ 879 (931)
++.+||+.||++||+++|+++
T Consensus 305 li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 305 MVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHccCCCCcCCCHHHHhh
Confidence 999999999999999999985
No 73
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=8.8e-38 Score=356.63 Aligned_cols=248 Identities=22% Similarity=0.346 Sum_probs=198.2
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc---chhhhhHHHHHHHHHhc-CCCCCcceeEEEecCCeEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVY 684 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~~~~lV~ 684 (931)
.+++.++||+|+||.||+|+++ +++.||+|+++... ....+.+.+|..++.++ +||||+++++++.+.+..++||
T Consensus 53 ~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~ 132 (396)
T 4dc2_A 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 132 (396)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred HcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEE
Confidence 4667899999999999999987 57899999987542 23345688999999887 8999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccc
Q 002358 685 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 764 (931)
Q Consensus 685 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~ 764 (931)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 133 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 133 EYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp ECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EcCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 99999999999874 4568999999999999999999998 89999999999999999999999999999863322
Q ss_pred ccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccc--hhhHHHHHHHhhhcCCeeecccc
Q 002358 765 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA--ELNIVHWARSMIKKGDVISIVDP 842 (931)
Q Consensus 765 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~--~~~l~~~~~~~~~~~~~~~i~d~ 842 (931)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....+.+.+.+.....
T Consensus 207 ~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 279 (396)
T 4dc2_A 207 G-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 279 (396)
T ss_dssp T-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC------
T ss_pred C-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc------
Confidence 2 22334579999999999999999999999999999999999999996432221 11112222222322221
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 002358 843 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKM 874 (931)
Q Consensus 843 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~ 874 (931)
.+ +......+.+++.+||+.||++||++
T Consensus 280 ~~----p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 280 RI----PRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp CC----CTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred CC----CCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 11 11122367899999999999999985
No 74
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.9e-38 Score=350.72 Aligned_cols=265 Identities=26% Similarity=0.423 Sum_probs=196.8
Q ss_pred HHHHHHhhccccCccCcEEEEEEEECCC----cEEEEEEccCc--cchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCe
Q 002358 606 LEEATNNFCKKIGKGSFGSVYYGKMKDG----KEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 679 (931)
Q Consensus 606 l~~~~~~~~~~LG~G~fG~Vy~a~~~~g----~~vAvK~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~ 679 (931)
+....|++.+.||+|+||.||+|.+... ..||||+++.. .....+.+.+|++++++++||||+++++++.....
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 3445677889999999999999987643 27999998764 33456789999999999999999999999987665
Q ss_pred E------EEEEEecCCCCHHHHhccCC---CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCce
Q 002358 680 R------ILVYEYMHNGTLRDRLHGSV---NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRA 750 (931)
Q Consensus 680 ~------~lV~E~~~~gsL~~~L~~~~---~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~v 750 (931)
. ++||||+++|+|.+++.... ....+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCE
Confidence 5 89999999999999986432 22368999999999999999999998 899999999999999999999
Q ss_pred EEeccccccccccccc-ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHH
Q 002358 751 KVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWAR 828 (931)
Q Consensus 751 kL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~ 828 (931)
||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||....... ....
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~~-- 251 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE---IYNY-- 251 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHH--
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH---HHHH--
Confidence 9999999987544322 12223346789999999999899999999999999999999 999997443322 1111
Q ss_pred HhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 829 SMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 829 ~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
+..+... ..+......+.+++.+||+.||++|||+.|+++.|++++....
T Consensus 252 --~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~ 301 (323)
T 3qup_A 252 --LIGGNRL---------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301 (323)
T ss_dssp --HHTTCCC---------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred --HhcCCCC---------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence 1111111 1112223468899999999999999999999999999886554
No 75
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-38 Score=354.77 Aligned_cols=267 Identities=27% Similarity=0.425 Sum_probs=209.8
Q ss_pred hHHHHHHhhccccCccCcEEEEEEEEC------CCcEEEEEEccCcc-chhhhhHHHHHHHHHhc-CCCCCcceeEEEec
Q 002358 605 ELEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEE 676 (931)
Q Consensus 605 ~l~~~~~~~~~~LG~G~fG~Vy~a~~~------~g~~vAvK~~~~~~-~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~ 676 (931)
++....+++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+++++++ +||||+++++++..
T Consensus 41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 344566778899999999999999862 45689999997543 23457799999999999 89999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHhccCCCC--------------------CCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecC
Q 002358 677 EHQRILVYEYMHNGTLRDRLHGSVNQ--------------------KPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRD 736 (931)
Q Consensus 677 ~~~~~lV~E~~~~gsL~~~L~~~~~~--------------------~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~D 736 (931)
.+..++||||+++|+|.+++...... ..+++..++.++.|+++||+|||+ .+|+|||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~D 197 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRD 197 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETT
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCC
Confidence 99999999999999999999754321 347899999999999999999998 8999999
Q ss_pred CCCCCccccCCCceEEecccccccccccccc-cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCc
Q 002358 737 VKSSNILLDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSV 814 (931)
Q Consensus 737 Ikp~NILld~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~ 814 (931)
|||+|||++.++.+||+|||++......... ......||+.|+|||.+.+..++.++||||||+++|||++ |..||..
T Consensus 198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 277 (344)
T 1rjb_A 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277 (344)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence 9999999999999999999999876443322 2233457889999999988899999999999999999998 9999974
Q ss_pred cCccchhhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 815 EDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 815 ~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
..... .... .+..+... ..+......+.+++.+||+.||++||+++||++.|+.+.....
T Consensus 278 ~~~~~--~~~~----~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 278 IPVDA--NFYK----LIQNGFKM---------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp CCCSH--HHHH----HHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred CCcHH--HHHH----HHhcCCCC---------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 43221 1112 12221111 1111223468899999999999999999999999998876543
No 76
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=7.2e-38 Score=342.07 Aligned_cols=259 Identities=19% Similarity=0.283 Sum_probs=197.5
Q ss_pred HhhccccCccCcEEEEEEEECCCcEEEEEEccCccch--hhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEecC
Q 002358 611 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSH--RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 688 (931)
Q Consensus 611 ~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 688 (931)
|++.+.||+|+||.||+|+..+|+.||+|++...... ..+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (288)
T 1ob3_A 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD 83 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred chhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecC
Confidence 5667899999999999999988999999998654322 23678899999999999999999999999999999999997
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccccc
Q 002358 689 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 768 (931)
Q Consensus 689 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~~~ 768 (931)
+ +|.+.+... ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++........
T Consensus 84 ~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 156 (288)
T 1ob3_A 84 Q-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK- 156 (288)
T ss_dssp E-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred C-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCccccc-
Confidence 5 899988743 3568999999999999999999998 89999999999999999999999999999765432221
Q ss_pred ccccccCCCccCCCccCC-CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCC---eee-----c
Q 002358 769 SSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD---VIS-----I 839 (931)
Q Consensus 769 ~~~~~gt~~y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~---~~~-----i 839 (931)
.....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+. ...+.+...... ... .
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ---LMRIFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHHCCCChhhchhhhcccc
Confidence 223458999999999876 4689999999999999999999999974332211 111111111100 000 0
Q ss_pred cccccc-------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 840 VDPVLI-------GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 840 ~d~~l~-------~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.++... ..........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 011100 0011122346789999999999999999999874
No 77
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-37 Score=344.76 Aligned_cols=272 Identities=25% Similarity=0.398 Sum_probs=205.7
Q ss_pred hhhHHHHHHhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhc--CCCCCcceeEEEecC---
Q 002358 603 LPELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRI--HHRNLVPLIGYCEEE--- 677 (931)
Q Consensus 603 ~~~l~~~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l--~HpnIv~l~g~~~~~--- 677 (931)
..+.....|++.+.||+|+||.||+|++. ++.||||++... ....+.+|.+++..+ +||||+++++++...
T Consensus 31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 106 (337)
T 3mdy_A 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGS 106 (337)
T ss_dssp HHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred cccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence 34555678888999999999999999987 899999998643 234455666666655 899999999999876
Q ss_pred -CeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcC-----CCCeEecCCCCCCccccCCCceE
Q 002358 678 -HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC-----NPGIIHRDVKSSNILLDINMRAK 751 (931)
Q Consensus 678 -~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~-----~~~ivH~DIkp~NILld~~~~vk 751 (931)
...++||||+++|+|.++++. ..+++..++.++.|++.||+|||+.+ ..+|+||||||+|||++.++.+|
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 182 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC 182 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred CCceEEEEeccCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence 788999999999999999974 35899999999999999999999710 12999999999999999999999
Q ss_pred Eeccccccccccccccc---ccccccCCCccCCCccCCCCCCcc------chhHHHHHHHHHHHhC----------CCCC
Q 002358 752 VSDFGLSRQAEEDLTHI---SSVARGTVGYLDPEYYGNQQLTEK------SDVYSFGVVLLELISG----------KKPV 812 (931)
Q Consensus 752 L~DFGla~~~~~~~~~~---~~~~~gt~~y~APE~l~~~~~s~k------sDVwSlGvlL~eLltG----------~~Pf 812 (931)
|+|||+++......... .....||+.|+|||++.+.....+ +|||||||++|||++| +.||
T Consensus 183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~ 262 (337)
T 3mdy_A 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262 (337)
T ss_dssp ECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccH
Confidence 99999997654332221 123468999999999988766665 9999999999999999 6666
Q ss_pred CccCccchhhHHHHHHHhhhcCCeeecccccccCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 813 SVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN-VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 813 ~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~-~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
........ .. ............ .+..... ...+....+.+++.+||+.||++|||++||++.|+++....
T Consensus 263 ~~~~~~~~-~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 263 HDLVPSDP-SY-EDMREIVCIKKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp TTTSCSSC-CH-HHHHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred hhhcCCCC-ch-hhhHHHHhhhcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 53222111 11 111111111111 1111111 12256678999999999999999999999999999987654
No 78
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=341.65 Aligned_cols=247 Identities=28% Similarity=0.392 Sum_probs=193.5
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc--------------------------hhhhhHHHHHHHHHhc
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------------------------HRTQQFVTEVALLSRI 662 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~--------------------------~~~~~~~~E~~il~~l 662 (931)
.|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+++++++
T Consensus 14 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 93 (298)
T 2zv2_A 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL 93 (298)
T ss_dssp TEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC
T ss_pred ceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC
Confidence 4667899999999999999876 688999999865321 1235689999999999
Q ss_pred CCCCCcceeEEEec--CCeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCC
Q 002358 663 HHRNLVPLIGYCEE--EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSS 740 (931)
Q Consensus 663 ~HpnIv~l~g~~~~--~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~ 740 (931)
+||||+++++++.+ ....++||||+++|+|.+++. ...+++..+..++.|+++||+|||+ .+|+||||||+
T Consensus 94 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~ 166 (298)
T 2zv2_A 94 DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT----LKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPS 166 (298)
T ss_dssp CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC----SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGG
T ss_pred CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHH
Confidence 99999999999986 568899999999999987653 4578999999999999999999998 89999999999
Q ss_pred CccccCCCceEEecccccccccccccccccccccCCCccCCCccCCCC---CCccchhHHHHHHHHHHHhCCCCCCccCc
Q 002358 741 NILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQ---LTEKSDVYSFGVVLLELISGKKPVSVEDF 817 (931)
Q Consensus 741 NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~---~s~ksDVwSlGvlL~eLltG~~Pf~~~~~ 817 (931)
|||++.++.+||+|||+++........ .....||+.|+|||.+.+.. ++.++|||||||++|||++|+.||.....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDAL-LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSCE-ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HEEECCCCCEEEecCCCcccccccccc-ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 999999999999999999876543222 23346899999999997765 47789999999999999999999974322
Q ss_pred cchhhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 818 GAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 818 ~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
. .+. ..+...... ..+ ... ....+.+++.+||+.||++||+++|+++
T Consensus 246 ~---~~~----~~~~~~~~~-~~~---~~~----~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 246 M---CLH----SKIKSQALE-FPD---QPD----IAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp H---HHH----HHHHHCCCC-CCS---SSC----CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred H---HHH----HHHhcccCC-CCC---ccc----cCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1 111 111111110 000 111 2236889999999999999999999864
No 79
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.7e-38 Score=344.84 Aligned_cols=255 Identities=22% Similarity=0.396 Sum_probs=203.4
Q ss_pred HHHHHhhccccCccCcEEEEEEEECC-C-------cEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCC
Q 002358 607 EEATNNFCKKIGKGSFGSVYYGKMKD-G-------KEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH 678 (931)
Q Consensus 607 ~~~~~~~~~~LG~G~fG~Vy~a~~~~-g-------~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~ 678 (931)
....+.+.+.||+|+||.||+|.++. + +.||+|++........+.+.+|++++++++||||+++++++.+.+
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 34567778999999999999998763 3 579999997766666788999999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCc--------e
Q 002358 679 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR--------A 750 (931)
Q Consensus 679 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~--------v 750 (931)
..++||||+++|+|.+++... ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++. +
T Consensus 86 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp CCEEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred CCEEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCccccccccee
Confidence 999999999999999999853 3448999999999999999999998 89999999999999998887 9
Q ss_pred EEecccccccccccccccccccccCCCccCCCccCC-CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHH
Q 002358 751 KVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS 829 (931)
Q Consensus 751 kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~ 829 (931)
||+|||++...... ....|++.|+|||.+.+ ..++.++||||||+++|||++|..|+...... ........
T Consensus 161 kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~--~~~~~~~~- 232 (289)
T 4fvq_A 161 KLSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS--QRKLQFYE- 232 (289)
T ss_dssp EECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--HHHHHHHH-
T ss_pred eeccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch--HHHHHHhh-
Confidence 99999998765332 22347889999999987 77899999999999999999965544312111 11111111
Q ss_pred hhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 830 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 830 ~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
....... .. ...+.+++.+||+.||++|||++|+++.|+++....
T Consensus 233 --~~~~~~~--------~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 233 --DRHQLPA--------PK----AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp --TTCCCCC--------CS----SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred --ccCCCCC--------CC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 1111111 11 125779999999999999999999999999886643
No 80
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-37 Score=345.33 Aligned_cols=249 Identities=19% Similarity=0.311 Sum_probs=202.7
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEecC
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 688 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 688 (931)
.|++.+.||+|+||.||+|..+ +++.||+|++... ......+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus 6 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~ 84 (321)
T 1tki_A 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS 84 (321)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred ceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCC
Confidence 4567889999999999999987 5889999998754 3445678899999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccC--CCceEEeccccccccccccc
Q 002358 689 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI--NMRAKVSDFGLSRQAEEDLT 766 (931)
Q Consensus 689 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~--~~~vkL~DFGla~~~~~~~~ 766 (931)
+|+|.+++.. ....+++..+..++.|+++||+|||+ .+|+||||||+|||++. ++.+||+|||+++.......
T Consensus 85 g~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 85 GLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCBHHHHHTS--SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 9999999974 23468999999999999999999998 89999999999999987 78999999999987644322
Q ss_pred ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccC
Q 002358 767 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 846 (931)
Q Consensus 767 ~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 846 (931)
.....||+.|+|||++.+..++.++|||||||++|||++|..||...... .... .... +... .++....
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~---~i~~-~~~~--~~~~~~~ 228 (321)
T 1tki_A 160 --FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ---QIIE---NIMN-AEYT--FDEEAFK 228 (321)
T ss_dssp --EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHH---HHHH-TCCC--CCHHHHT
T ss_pred --cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH---HHHH---HHHc-CCCC--CChhhhc
Confidence 23345899999999999988999999999999999999999999743321 1111 1111 1110 0110111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 847 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 847 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.. ...+.+++.+||+.||++|||++|+++
T Consensus 229 ~~----s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 229 EI----SIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp TS----CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cC----CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11 236789999999999999999999986
No 81
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.4e-37 Score=351.78 Aligned_cols=270 Identities=17% Similarity=0.235 Sum_probs=207.9
Q ss_pred HHHHhhccccCccCcEEEEEEEECC------CcEEEEEEccCccchh-----------hhhHHHHHHHHHhcCCCCCcce
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMKD------GKEVAVKIMADSCSHR-----------TQQFVTEVALLSRIHHRNLVPL 670 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~~------g~~vAvK~~~~~~~~~-----------~~~~~~E~~il~~l~HpnIv~l 670 (931)
...|++.+.||+|+||.||+|.++. ++.||||++....... ...+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 3457778999999999999999875 4789999986543211 1234456667778889999999
Q ss_pred eEEEecC----CeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCcccc-
Q 002358 671 IGYCEEE----HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD- 745 (931)
Q Consensus 671 ~g~~~~~----~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld- 745 (931)
++++... ...++||||+ +++|.+++.. ....+++..++.++.||+.||+|||+ .+|+||||||+|||++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA--NAKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEES
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEec
Confidence 9998764 4589999999 9999999975 34679999999999999999999998 8999999999999999
Q ss_pred -CCCceEEeccccccccccccccc------ccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCcc
Q 002358 746 -INMRAKVSDFGLSRQAEEDLTHI------SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFG 818 (931)
Q Consensus 746 -~~~~vkL~DFGla~~~~~~~~~~------~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~ 818 (931)
.++.+||+|||+++......... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 88999999999998764432211 12345999999999999999999999999999999999999999743222
Q ss_pred chhhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 819 AELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 819 ~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
.....+...... ..+.+++++.+... ..+..+.+++.+||+.+|++||++++|++.|+++.....
T Consensus 268 --~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 268 --PKYVRDSKIRYR-ENIASLMDKCFPAA---NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp --HHHHHHHHHHHH-HCHHHHHHHHSCTT---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred --HHHHHHHHHHhh-hhHHHHHHHhcccc---cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 222222222111 12333344333211 123468899999999999999999999999999886543
No 82
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=7.4e-38 Score=348.59 Aligned_cols=249 Identities=24% Similarity=0.320 Sum_probs=180.0
Q ss_pred cccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcC-CCCCcceeEEEecCCeEEEEEEecCCCCH
Q 002358 615 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYEYMHNGTL 692 (931)
Q Consensus 615 ~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~g~~~~~~~~~lV~E~~~~gsL 692 (931)
+.||+|+||.||+|.++ +++.||||++... ....+.+|+.+++.++ ||||+++++++.+....++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 78999999999999986 6899999998643 3456789999999997 99999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCC---ceEEecccccccccccccccc
Q 002358 693 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM---RAKVSDFGLSRQAEEDLTHIS 769 (931)
Q Consensus 693 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~---~vkL~DFGla~~~~~~~~~~~ 769 (931)
.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++ .+||+|||+++........ .
T Consensus 94 ~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~-~ 166 (325)
T 3kn6_A 94 FERIKK---KKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP-L 166 (325)
T ss_dssp HHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc-c
Confidence 999984 4579999999999999999999998 8999999999999998765 7999999999865433222 2
Q ss_pred cccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccCCCC
Q 002358 770 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVK 849 (931)
Q Consensus 770 ~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 849 (931)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...+..........+...+..+.... .....
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~---- 240 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSF--EGEAW---- 240 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCC--CSHHH----
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCC--Ccccc----
Confidence 334589999999999999999999999999999999999999975433211111112222232222210 00000
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 850 IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 850 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
......+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 241 KNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred cCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 112246889999999999999999999863
No 83
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=4.4e-38 Score=342.16 Aligned_cols=259 Identities=28% Similarity=0.448 Sum_probs=205.4
Q ss_pred HHHhhccccCccCcEEEEEEEECC----CcEEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 683 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~~----g~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV 683 (931)
..+.+.+.||+|+||.||+|.+.+ +..||+|+++... ....+.+.+|++++++++||||+++++++.++ ..++|
T Consensus 12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v 90 (281)
T 3cc6_A 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWII 90 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEE
T ss_pred cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEE
Confidence 456678999999999999998653 3469999987653 34567899999999999999999999998754 56899
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccc
Q 002358 684 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 763 (931)
Q Consensus 684 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~ 763 (931)
|||+++++|.+++... ...+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++.....
T Consensus 91 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 91 MELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 9999999999999752 4568999999999999999999998 8999999999999999999999999999987655
Q ss_pred cccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeecccc
Q 002358 764 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 842 (931)
Q Consensus 764 ~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~ 842 (931)
..........+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+ ..+....
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~~~~----~~~~~~~---- 234 (281)
T 3cc6_A 166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VIGVL----EKGDRLP---- 234 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HHHHH----HHTCCCC----
T ss_pred ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HHHHH----hcCCCCC----
Confidence 43333344457889999999988889999999999999999998 999997433222 11111 1111110
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 843 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 843 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
. +......+.+++.+||+.+|++||+++|+++.|+++...+.
T Consensus 235 -~----~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 276 (281)
T 3cc6_A 235 -K----PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEK 276 (281)
T ss_dssp -C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -C----CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhh
Confidence 1 11122368899999999999999999999999999877654
No 84
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=359.63 Aligned_cols=253 Identities=23% Similarity=0.310 Sum_probs=204.0
Q ss_pred HHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEE
Q 002358 607 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 683 (931)
Q Consensus 607 ~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV 683 (931)
....|++.+.||+|+||.||+|... +|+.+|+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 3466888999999999999999876 68999999987543 23456789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCcccc---CCCceEEeccccccc
Q 002358 684 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD---INMRAKVSDFGLSRQ 760 (931)
Q Consensus 684 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld---~~~~vkL~DFGla~~ 760 (931)
|||+++|+|.+.+.. ...+++..+..++.||++||+|||+ .+|+||||||+|||++ .++.+||+|||+++.
T Consensus 89 ~E~~~gg~L~~~i~~---~~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~ 162 (444)
T 3soa_A 89 FDLVTGGELFEDIVA---REYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162 (444)
T ss_dssp ECCCBCCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred EEeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence 999999999999874 4568999999999999999999998 8999999999999998 467899999999987
Q ss_pred ccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecc
Q 002358 761 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 840 (931)
Q Consensus 761 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~ 840 (931)
....... .....||+.|+|||++.+..++.++||||+||++|+|++|..||...+.. .+.+ .+..+... ..
T Consensus 163 ~~~~~~~-~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~---~~~~----~i~~~~~~-~~ 233 (444)
T 3soa_A 163 VEGEQQA-WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH---RLYQ----QIKAGAYD-FP 233 (444)
T ss_dssp CCTTCCB-CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHH----HHHHTCCC-CC
T ss_pred ecCCCce-eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH---HHHH----HHHhCCCC-CC
Confidence 6543322 23356999999999999999999999999999999999999999743321 1111 12222111 11
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 841 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 841 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.+ ..... ...+.+++.+||+.||++|||++|+++
T Consensus 234 ~~-~~~~~----s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 234 SP-EWDTV----TPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp TT-TTTTS----CHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cc-ccccC----CHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 11 11112 236789999999999999999999986
No 85
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.3e-37 Score=340.63 Aligned_cols=260 Identities=21% Similarity=0.283 Sum_probs=197.7
Q ss_pred HhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc--hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEec
Q 002358 611 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 687 (931)
Q Consensus 611 ~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 687 (931)
|++.+.||+|+||+||+|..+ +++.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 83 (292)
T 3o0g_A 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecC
Confidence 566789999999999999986 589999999865432 33467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccccc
Q 002358 688 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 767 (931)
Q Consensus 688 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~~ 767 (931)
++ ++.+.+.. ....+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++........
T Consensus 84 ~~-~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (292)
T 3o0g_A 84 DQ-DLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157 (292)
T ss_dssp SE-EHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred CC-CHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence 75 55555543 24569999999999999999999998 89999999999999999999999999999876433222
Q ss_pred cccccccCCCccCCCccCCCC-CCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcC---Ceeecc---
Q 002358 768 ISSVARGTVGYLDPEYYGNQQ-LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG---DVISIV--- 840 (931)
Q Consensus 768 ~~~~~~gt~~y~APE~l~~~~-~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~---~~~~i~--- 840 (931)
.....||+.|+|||++.+.. ++.++||||+||++|||++|..|+..... .......+.+..... ......
T Consensus 158 -~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 158 -YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND--VDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp -CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS--HHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred -ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC--HHHHHHHHHHHhCCCChhhhhhhcccc
Confidence 23345899999999987765 79999999999999999999888642221 111122222111110 000000
Q ss_pred c---------ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 841 D---------PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 841 d---------~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
+ ..............+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 00000111123346789999999999999999999875
No 86
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=8.4e-38 Score=349.12 Aligned_cols=266 Identities=24% Similarity=0.447 Sum_probs=212.8
Q ss_pred HHHHHHhhccccCccCcEEEEEEEEC--------CCcEEEEEEccCccc-hhhhhHHHHHHHHHhc-CCCCCcceeEEEe
Q 002358 606 LEEATNNFCKKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCE 675 (931)
Q Consensus 606 l~~~~~~~~~~LG~G~fG~Vy~a~~~--------~g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~g~~~ 675 (931)
+....|++.+.||+|+||.||+|++. +++.||+|+++.... ...+.+.+|+++++++ +||||+++++++.
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 33456778899999999999999874 467899999976533 3457799999999999 8999999999999
Q ss_pred cCCeEEEEEEecCCCCHHHHhccCCC-------------CCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCc
Q 002358 676 EEHQRILVYEYMHNGTLRDRLHGSVN-------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNI 742 (931)
Q Consensus 676 ~~~~~~lV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NI 742 (931)
..+..++||||+++|+|.+++..... ...+++..++.++.|+++||+|||+ .+|+||||||+||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NI 188 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNV 188 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGE
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceE
Confidence 99999999999999999999985431 2348899999999999999999998 8999999999999
Q ss_pred cccCCCceEEecccccccccccccc-cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccch
Q 002358 743 LLDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAE 820 (931)
Q Consensus 743 Lld~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~ 820 (931)
|++.++.+||+|||+++........ ......+++.|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-- 266 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-- 266 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH--
Confidence 9999999999999999875543221 1223346789999999988889999999999999999999 99999743321
Q ss_pred hhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcC
Q 002358 821 LNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 890 (931)
Q Consensus 821 ~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 890 (931)
.+... +..+.... . +......+.+++.+||+.+|++||+++|+++.|+++......
T Consensus 267 -~~~~~----~~~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~ 322 (334)
T 2pvf_A 267 -ELFKL----LKEGHRMD-----K----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322 (334)
T ss_dssp -HHHHH----HHHTCCCC-----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred -HHHHH----HhcCCCCC-----C----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcccc
Confidence 12221 11121111 1 112234688999999999999999999999999999876654
No 87
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.8e-37 Score=348.39 Aligned_cols=248 Identities=23% Similarity=0.344 Sum_probs=198.8
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc---chhhhhHHHHHHHHHhc-CCCCCcceeEEEecCCeEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVY 684 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~~~~lV~ 684 (931)
.+++.+.||+|+||.||+|+++ +++.||+|+++... ....+.+.+|..+++++ +||||+++++++.+....++||
T Consensus 10 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~ 89 (345)
T 3a8x_A 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 89 (345)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEE
Confidence 4567899999999999999987 58899999997542 23456688999999988 8999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccc
Q 002358 685 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 764 (931)
Q Consensus 685 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~ 764 (931)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 90 e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 90 EYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp CCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred eCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999874 3568999999999999999999998 89999999999999999999999999999864322
Q ss_pred ccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccch--hhHHHHHHHhhhcCCeeecccc
Q 002358 765 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE--LNIVHWARSMIKKGDVISIVDP 842 (931)
Q Consensus 765 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~--~~l~~~~~~~~~~~~~~~i~d~ 842 (931)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ......+.+.+..+..
T Consensus 164 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 236 (345)
T 3a8x_A 164 GD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 236 (345)
T ss_dssp TC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------
T ss_pred CC-cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------
Confidence 22 23345699999999999999999999999999999999999999964322111 1111222222222211
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 002358 843 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKM 874 (931)
Q Consensus 843 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~ 874 (931)
.+ +......+.+++.+||+.||++||++
T Consensus 237 ~~----p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 237 RI----PRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp CC----CTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred CC----CCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 11 11222367899999999999999995
No 88
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.7e-37 Score=344.33 Aligned_cols=269 Identities=25% Similarity=0.403 Sum_probs=212.4
Q ss_pred hhhHHHHHHhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHh--cCCCCCcceeEEEecCC--
Q 002358 603 LPELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSR--IHHRNLVPLIGYCEEEH-- 678 (931)
Q Consensus 603 ~~~l~~~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~--l~HpnIv~l~g~~~~~~-- 678 (931)
..+.....|++.+.||+|+||.||+|++. |+.||||++... ..+.+.+|.+++.. ++||||+++++++....
T Consensus 36 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~ 111 (342)
T 1b6c_B 36 VQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGT 111 (342)
T ss_dssp HHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSS
T ss_pred ecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCc
Confidence 34566778888999999999999999985 899999998643 34567889999988 68999999999998775
Q ss_pred --eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhh--------hcCCCCeEecCCCCCCccccCCC
Q 002358 679 --QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH--------TGCNPGIIHRDVKSSNILLDINM 748 (931)
Q Consensus 679 --~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH--------~~~~~~ivH~DIkp~NILld~~~ 748 (931)
..++||||+++|+|.+++.. ..+++..++.++.|+++||+||| + .+|+||||||+|||++.++
T Consensus 112 ~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~NIll~~~~ 184 (342)
T 1b6c_B 112 WTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNG 184 (342)
T ss_dssp CCCEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCCSGGGEEECTTS
T ss_pred cceeEEEEeecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCCCHHHEEECCCC
Confidence 78999999999999999974 35899999999999999999999 6 8999999999999999999
Q ss_pred ceEEecccccccccccccc---cccccccCCCccCCCccCCC------CCCccchhHHHHHHHHHHHhC----------C
Q 002358 749 RAKVSDFGLSRQAEEDLTH---ISSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISG----------K 809 (931)
Q Consensus 749 ~vkL~DFGla~~~~~~~~~---~~~~~~gt~~y~APE~l~~~------~~s~ksDVwSlGvlL~eLltG----------~ 809 (931)
.+||+|||+++........ ......||+.|+|||.+.+. .++.++||||||+++|||++| +
T Consensus 185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~ 264 (342)
T 1b6c_B 185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 264 (342)
T ss_dssp CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence 9999999999875443322 22344689999999998775 334789999999999999999 7
Q ss_pred CCCCccCccchhhHHHHHHHhhhcCCeeecccccccCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 810 KPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN-VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 810 ~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~-~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
.||....... .....+.. .+..... .+.+... ...+....+.+++.+||+.+|++||+++||++.|+++...+
T Consensus 265 ~p~~~~~~~~-~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 265 LPYYDLVPSD-PSVEEMRK-VVCEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp CTTTTTSCSS-CCHHHHHH-HHTTSCC----CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cCccccCcCc-ccHHHHHH-HHHHHHh----CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 7886332221 11112221 1211111 1111111 13356678999999999999999999999999999987654
No 89
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.1e-38 Score=349.88 Aligned_cols=260 Identities=22% Similarity=0.283 Sum_probs=192.5
Q ss_pred HHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcC-CCCCcceeEEEe--------c
Q 002358 607 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCE--------E 676 (931)
Q Consensus 607 ~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~g~~~--------~ 676 (931)
....|++.+.||+|+||.||+|++. +++.||||++........+.+.+|+.+++++. ||||+++++++. .
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 3446778899999999999999976 68999999987666666778999999999996 999999999983 3
Q ss_pred CCeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCC--eEecCCCCCCccccCCCceEEec
Q 002358 677 EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMRAKVSD 754 (931)
Q Consensus 677 ~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~--ivH~DIkp~NILld~~~~vkL~D 754 (931)
....++||||+. |+|.+++........+++..++.++.||+.||+|||+ .+ |+||||||+|||++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEec
Confidence 455789999995 7999988754445679999999999999999999998 77 99999999999999999999999
Q ss_pred ccccccccccccc-----------cccccccCCCccCCCcc---CCCCCCccchhHHHHHHHHHHHhCCCCCCccCccch
Q 002358 755 FGLSRQAEEDLTH-----------ISSVARGTVGYLDPEYY---GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE 820 (931)
Q Consensus 755 FGla~~~~~~~~~-----------~~~~~~gt~~y~APE~l---~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~ 820 (931)
||+++........ ......||+.|+|||++ .+..++.++||||||+++|||++|+.||.......
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~- 260 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR- 260 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-
Confidence 9999875432211 11134589999999998 56778999999999999999999999996322110
Q ss_pred hhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 821 LNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 821 ~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
. .. +... ....... ...+.+++.+||+.+|++||+++|+++.|+++.....
T Consensus 261 --~---~~-----~~~~----~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 261 --I---VN-----GKYS----IPPHDTQ----YTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp ---------------CC----CCTTCCS----SGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred --h---hc-----Cccc----CCccccc----chHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 0 00 0000 0000111 1247789999999999999999999999998876543
No 90
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.1e-37 Score=360.43 Aligned_cols=253 Identities=24% Similarity=0.310 Sum_probs=202.8
Q ss_pred HHhhccccCccCcEEEEEEEECC-CcEEEEEEccCccc---hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~~-g~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
.+++.++||+|+||+||+|++++ ++.||+|+++.... ...+.+.+|..++..++||||+++++++.+.+..++|||
T Consensus 75 ~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~E 154 (437)
T 4aw2_A 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMD 154 (437)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEEC
T ss_pred heEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEe
Confidence 45567899999999999999874 78999999865322 223458999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
||++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 155 y~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~ 229 (437)
T 4aw2_A 155 YYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 229 (437)
T ss_dssp CCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred cCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC
Confidence 99999999999752 4568999999999999999999998 899999999999999999999999999998765544
Q ss_pred cccccccccCCCccCCCccC-----CCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecc
Q 002358 766 THISSVARGTVGYLDPEYYG-----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 840 (931)
Q Consensus 766 ~~~~~~~~gt~~y~APE~l~-----~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~ 840 (931)
........||+.|+|||++. ...++.++|||||||++|||++|+.||...+..+. ...+......-..
T Consensus 230 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~---~~~i~~~~~~~~~---- 302 (437)
T 4aw2_A 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET---YGKIMNHKERFQF---- 302 (437)
T ss_dssp CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HHHHHTHHHHCCC----
T ss_pred CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH---HHhhhhccccccC----
Confidence 44444567999999999986 56799999999999999999999999974433221 1111110000011
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHH
Q 002358 841 DPVLIGNVKIESIWRIAEVAIQCVEQRGFS--RPKMQEIVL 879 (931)
Q Consensus 841 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~--RPs~~evl~ 879 (931)
|...... ...+.+++.+||..+|++ ||+++|+++
T Consensus 303 -p~~~~~~----s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 303 -PTQVTDV----SENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp -CSSCCCS----CHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred -CcccccC----CHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 1111112 235789999999888888 999999875
No 91
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.9e-38 Score=354.80 Aligned_cols=249 Identities=24% Similarity=0.347 Sum_probs=198.3
Q ss_pred HHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc---chhhhhHHHHHHHHHhc-CCCCCcceeEEEecCCeEE
Q 002358 607 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRI 681 (931)
Q Consensus 607 ~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~~~~ 681 (931)
....+++.+.||+|+||.||+|+.+ +|+.||||+++... ....+.+.+|.++++.+ +||||+++++++.+.+..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3345677899999999999999987 58999999987542 23345688999999988 6999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccc
Q 002358 682 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 761 (931)
Q Consensus 682 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~ 761 (931)
+||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 101 lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQK---SRRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 99999999999999974 4568999999999999999999998 89999999999999999999999999999864
Q ss_pred cccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccc
Q 002358 762 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 841 (931)
Q Consensus 762 ~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d 841 (931)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+... ..+ .+..+..
T Consensus 175 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~---~~~----~i~~~~~----- 241 (353)
T 3txo_A 175 ICNGV-TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD---LFE----AILNDEV----- 241 (353)
T ss_dssp CC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH----HHHHCCC-----
T ss_pred ccCCc-cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH---HHH----HHHcCCC-----
Confidence 32222 2334569999999999998899999999999999999999999997443221 111 1111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCH------HHHHH
Q 002358 842 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKM------QEIVL 879 (931)
Q Consensus 842 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~------~evl~ 879 (931)
.++......+.+++.+||+.+|++||++ +|+++
T Consensus 242 -----~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 -----VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp -----CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred -----CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 0111122367899999999999999998 66654
No 92
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=8.1e-38 Score=341.82 Aligned_cols=264 Identities=30% Similarity=0.541 Sum_probs=198.6
Q ss_pred hhHHHHHHhhccccCccCcEEEEEEEECCCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEE
Q 002358 604 PELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 681 (931)
Q Consensus 604 ~~l~~~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~ 681 (931)
.|+....+++.+.||+|+||.||+|++. ..||+|+++... ....+.+.+|++++++++||||+++++++. ....+
T Consensus 19 ~ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~ 95 (289)
T 3og7_A 19 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLA 95 (289)
T ss_dssp CBCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE
T ss_pred CccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccE
Confidence 3555667788899999999999999865 359999986543 334577999999999999999999999664 55689
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccc
Q 002358 682 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 761 (931)
Q Consensus 682 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~ 761 (931)
+||||+++++|.+++... ...+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 96 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 96 IVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170 (289)
T ss_dssp EEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred EEEEecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceecccc
Confidence 999999999999999643 4568999999999999999999998 89999999999999999999999999999765
Q ss_pred cccc-cccccccccCCCccCCCccC---CCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCee
Q 002358 762 EEDL-THISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 837 (931)
Q Consensus 762 ~~~~-~~~~~~~~gt~~y~APE~l~---~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~ 837 (931)
.... ........||+.|+|||.+. ...++.++||||||+++|||++|+.||..... ...+.. .+..+...
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~----~~~~~~~~ 244 (289)
T 3og7_A 171 SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN--RDQIIE----MVGRGSLS 244 (289)
T ss_dssp -------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC--HHHHHH----HHHHTSCC
T ss_pred ccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch--HHHHHH----HhcccccC
Confidence 4321 12223346899999999986 56788899999999999999999999974322 112222 22222221
Q ss_pred ecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 002358 838 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 886 (931)
Q Consensus 838 ~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 886 (931)
.... ......+..+.+++.+||+.+|++||+++|+++.|+++.+
T Consensus 245 ~~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 245 PDLS-----KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CCTT-----SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred cchh-----hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 1111 1112233478899999999999999999999999998754
No 93
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.7e-38 Score=377.45 Aligned_cols=261 Identities=27% Similarity=0.437 Sum_probs=211.5
Q ss_pred HHHHHHhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 606 LEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 606 l~~~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
+....+++.+.||+|+||.||+|.++++..||||+++... ...++|.+|+++|++++||||+++++++.+ +..++|||
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 3345567789999999999999999988899999997643 234679999999999999999999999876 67899999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
|+++|+|.+++... ....+++..++.++.||++||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 342 ~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 417 (535)
T 2h8h_A 342 YMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417 (535)
T ss_dssp CCTTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH
T ss_pred hhcCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc
Confidence 99999999999742 23458899999999999999999998 899999999999999999999999999998765433
Q ss_pred cccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeecccccc
Q 002358 766 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 844 (931)
Q Consensus 766 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 844 (931)
........++..|+|||.+....++.++|||||||++|||++ |+.||...... .+.+ .+..+...
T Consensus 418 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~---~~~~----~i~~~~~~------- 483 (535)
T 2h8h_A 418 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EVLD----QVERGYRM------- 483 (535)
T ss_dssp HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH---HHHH----HHHTTCCC-------
T ss_pred eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHHcCCCC-------
Confidence 222333446789999999988899999999999999999999 99999743221 1222 12222111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 845 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 845 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
..+......+.+++.+||+.+|++||++++|++.|+++....
T Consensus 484 --~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 484 --PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred --CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 011222346889999999999999999999999999876433
No 94
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-37 Score=352.35 Aligned_cols=250 Identities=21% Similarity=0.336 Sum_probs=204.6
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEecC
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 688 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 688 (931)
.|++.+.||+|+||.||+|..+ +|+.||+|++..........+.+|++++++++||||+++++++.+....++||||++
T Consensus 52 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 131 (387)
T 1kob_A 52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS 131 (387)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred ceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCC
Confidence 4677899999999999999886 689999999976655566789999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccC--CCceEEeccccccccccccc
Q 002358 689 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI--NMRAKVSDFGLSRQAEEDLT 766 (931)
Q Consensus 689 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~--~~~vkL~DFGla~~~~~~~~ 766 (931)
+|+|.+++.. ....+++..+..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||+++.......
T Consensus 132 gg~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 132 GGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCcHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 9999999874 23468999999999999999999998 89999999999999974 57799999999987654322
Q ss_pred ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccC
Q 002358 767 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 846 (931)
Q Consensus 767 ~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 846 (931)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+ .. .... .++....
T Consensus 207 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~---~~~~~i---~~-~~~~--~~~~~~~ 275 (387)
T 1kob_A 207 --VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL---ETLQNV---KR-CDWE--FDEDAFS 275 (387)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHHHHH---HH-CCCC--CCSSTTT
T ss_pred --eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH---HHHHHH---Hh-CCCC--CCccccc
Confidence 22346899999999999999999999999999999999999999743321 111111 11 1110 1111111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 847 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 847 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
. ....+.+++.+||+.||++|||++|+++
T Consensus 276 ~----~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 276 S----VSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp T----SCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred c----CCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 2 2236789999999999999999999985
No 95
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.7e-38 Score=351.84 Aligned_cols=257 Identities=25% Similarity=0.419 Sum_probs=202.5
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcE----EEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKE----VAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 682 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~----vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~l 682 (931)
..+++.+.||+|+||.||+|.+. +++. ||+|.+.... ....+.+.+|+.++++++||||+++++++. +...++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 34667899999999999999976 3443 7888875432 233467889999999999999999999986 456889
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccc
Q 002358 683 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 762 (931)
Q Consensus 683 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~ 762 (931)
||||+++|+|.+++... ...+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 92 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 166 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLP 166 (325)
T ss_dssp EEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred EEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcccccC
Confidence 99999999999999743 3568889999999999999999998 899999999999999999999999999998765
Q ss_pred ccccc-cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeecc
Q 002358 763 EDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 840 (931)
Q Consensus 763 ~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~ 840 (931)
..... ......|+..|+|||.+.+..++.++||||||+++|||++ |+.||....... ... .+..+.....
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~----~~~~~~~~~~- 238 (325)
T 3kex_A 167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VPD----LLEKGERLAQ- 238 (325)
T ss_dssp CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HHH----HHHTTCBCCC-
T ss_pred cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HHH----HHHcCCCCCC-
Confidence 43322 2334457889999999998899999999999999999999 999997443322 111 1112211111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 002358 841 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 887 (931)
Q Consensus 841 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 887 (931)
+ ......+.+++.+||+.+|++||+++|+++.|+++...
T Consensus 239 -~-------~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 239 -P-------QICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp -C-------TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred -C-------CcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0 01112467899999999999999999999999987654
No 96
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=351.56 Aligned_cols=249 Identities=24% Similarity=0.336 Sum_probs=203.2
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc---chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 684 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~ 684 (931)
..|++.+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|+++|+.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 45677899999999999999987 58899999986532 223467889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccc
Q 002358 685 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 764 (931)
Q Consensus 685 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~ 764 (931)
||+++|+|.+++.. ...+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 95 e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp CCCTTEEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 99999999999983 4569999999999999999999998 89999999999999999999999999999875433
Q ss_pred ccccccccccCCCccCCCccCC---CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccc
Q 002358 765 LTHISSVARGTVGYLDPEYYGN---QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 841 (931)
Q Consensus 765 ~~~~~~~~~gt~~y~APE~l~~---~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d 841 (931)
. ......||+.|+|||++.. ..++.++|||||||++|||++|+.||................. ...
T Consensus 169 ~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~----~~~----- 237 (384)
T 4fr4_A 169 T--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET----TVV----- 237 (384)
T ss_dssp C--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHH----CCC-----
T ss_pred C--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhh----ccc-----
Confidence 2 2334569999999999864 4589999999999999999999999975443333333222211 110
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCC-HHHHHH
Q 002358 842 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPK-MQEIVL 879 (931)
Q Consensus 842 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs-~~evl~ 879 (931)
.++......+.+++.+||+.+|++||+ +++|.+
T Consensus 238 -----~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 -----TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -----CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -----CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 111222346889999999999999998 777653
No 97
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-37 Score=343.77 Aligned_cols=243 Identities=22% Similarity=0.364 Sum_probs=201.3
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc---hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
.+++.+.||+|+||.||+|+.+ +|+.||+|+++.... ...+.+.+|+.+++.++||||+++++++.+....++|||
T Consensus 7 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e 86 (318)
T 1fot_A 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMD 86 (318)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEe
Confidence 4567899999999999999986 689999999875422 234668899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 87 ~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 87 YIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp CCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred CCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 9999999999974 4568999999999999999999998 89999999999999999999999999999865432
Q ss_pred cccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccccccc
Q 002358 766 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 845 (931)
Q Consensus 766 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 845 (931)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .. ...... +.. ..
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~---~~~i~~-~~~------~~- 222 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM---KT---YEKILN-AEL------RF- 222 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH---HH---HHHHHH-CCC------CC-
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HH---HHHHHh-CCC------CC-
Confidence 23456999999999999999999999999999999999999999743321 11 111111 111 11
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 002358 846 GNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVL 879 (931)
Q Consensus 846 ~~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~ 879 (931)
+......+.+++.+||+.+|++|| +++|+++
T Consensus 223 ---p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 223 ---PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp ---CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ---CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 111223678999999999999999 8888874
No 98
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.1e-37 Score=333.91 Aligned_cols=252 Identities=21% Similarity=0.367 Sum_probs=203.5
Q ss_pred HHHhhccccCccCcEEEEEEEECCCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecC--CeEEEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE--HQRILVY 684 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~--~~~~lV~ 684 (931)
..+++.+.||+|+||.||+|+++ ++.||||+++... ....+.+.+|++++++++||||+++++++.+. ...++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 45667899999999999999986 8999999987543 34456799999999999999999999999877 7889999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCC--eEecCCCCCCccccCCCceEEeccccccccc
Q 002358 685 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMRAKVSDFGLSRQAE 762 (931)
Q Consensus 685 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~--ivH~DIkp~NILld~~~~vkL~DFGla~~~~ 762 (931)
||+++|+|.+++... ....+++..++.++.|+++||+|||+ .+ ++||||||+||+++.++.++|+|||+.....
T Consensus 89 e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp ECCTTCBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred cccCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 999999999999853 23368999999999999999999997 77 9999999999999999999999998875432
Q ss_pred ccccccccccccCCCccCCCccCCCCCCc---cchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeec
Q 002358 763 EDLTHISSVARGTVGYLDPEYYGNQQLTE---KSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 839 (931)
Q Consensus 763 ~~~~~~~~~~~gt~~y~APE~l~~~~~s~---ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i 839 (931)
. ....||+.|+|||.+.+..++. ++||||||+++|||++|+.||....... ........+..
T Consensus 165 ~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~~~~--- 229 (271)
T 3kmu_A 165 S------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME------IGMKVALEGLR--- 229 (271)
T ss_dssp C------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH------HHHHHHHSCCC---
T ss_pred c------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH------HHHHHHhcCCC---
Confidence 2 2235899999999998765554 7999999999999999999997332211 11111211111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 002358 840 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 886 (931)
Q Consensus 840 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 886 (931)
+.. +......+.+++.+||+.+|++|||++|+++.|+++..
T Consensus 230 --~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 230 --PTI----PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp --CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred --CCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 111 11223368899999999999999999999999998743
No 99
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-37 Score=336.59 Aligned_cols=259 Identities=24% Similarity=0.415 Sum_probs=209.5
Q ss_pred Hhhcc-ccCccCcEEEEEEEEC---CCcEEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 611 NNFCK-KIGKGSFGSVYYGKMK---DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 611 ~~~~~-~LG~G~fG~Vy~a~~~---~g~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
+.+.+ .||+|+||.||+|.+. +++.||+|+++... ....+.+.+|++++++++||||+++++++ ..+..++|||
T Consensus 11 ~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e 89 (287)
T 1u59_A 11 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVME 89 (287)
T ss_dssp EEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEE
T ss_pred hhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEE
Confidence 34444 8999999999999864 57889999997653 34567899999999999999999999999 4566899999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
|+++++|.+++.. ....+++..+..++.|+++||.|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 90 MAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp CCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred eCCCCCHHHHHHh--CCccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 9999999999874 34568999999999999999999998 899999999999999999999999999998764332
Q ss_pred cc--cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeecccc
Q 002358 766 TH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 842 (931)
Q Consensus 766 ~~--~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~ 842 (931)
.. ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... ..... +..+...
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~~----i~~~~~~----- 232 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVMAF----IEQGKRM----- 232 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH---HHHHH----HHTTCCC-----
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH---HHHHH----HhcCCcC-----
Confidence 22 1223346889999999988889999999999999999999 99999743321 22222 2222111
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcCC
Q 002358 843 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGG 891 (931)
Q Consensus 843 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 891 (931)
..+......+.+++.+||+.+|++||+++|+++.|+++.......
T Consensus 233 ----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 233 ----ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp ----CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred ----CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 111222347889999999999999999999999999998766543
No 100
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=5.4e-37 Score=335.33 Aligned_cols=265 Identities=23% Similarity=0.312 Sum_probs=206.4
Q ss_pred HHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEE-ecCCeEEEEEE
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYC-EEEHQRILVYE 685 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~-~~~~~~~lV~E 685 (931)
...|++.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|+++++.++|++++..++.+ ......++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 356778899999999999999974 68999999865432 335688999999999988877777665 56778899999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccc---cCCCceEEeccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAE 762 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILl---d~~~~vkL~DFGla~~~~ 762 (931)
|+ +++|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++...
T Consensus 86 ~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 86 LL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp CC-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred cc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 99 99999998743 3468999999999999999999998 899999999999999 789999999999998765
Q ss_pred ccccc------cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCe
Q 002358 763 EDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 836 (931)
Q Consensus 763 ~~~~~------~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 836 (931)
..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..............+.........
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh
Confidence 43221 123456899999999999999999999999999999999999999754433222222222111111110
Q ss_pred eecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 837 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 837 ~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
+.+...+ ...+.+++.+||+.+|++||+++||++.|+++.....
T Consensus 240 -----~~~~~~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 240 -----EVLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp -----HHHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred -----hhhhccC----CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 0011112 2368899999999999999999999999999876553
No 101
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=343.43 Aligned_cols=250 Identities=22% Similarity=0.289 Sum_probs=197.1
Q ss_pred hhhHHHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc--hhhhhHHHHHHHHHhc-CCCCCcceeEEEecCC
Q 002358 603 LPELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 678 (931)
Q Consensus 603 ~~~l~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~ 678 (931)
..++....+++.++||+|+||+||+|++. +|+.||||++..... .....+.+|+..+.++ +||||+++++++.+.+
T Consensus 51 ~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~ 130 (311)
T 3p1a_A 51 PESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG 130 (311)
T ss_dssp SSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred ccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence 44666788889999999999999999987 799999999865332 3334556666666655 8999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccc
Q 002358 679 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 758 (931)
Q Consensus 679 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla 758 (931)
..++||||+ +++|.+.+... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a 204 (311)
T 3p1a_A 131 ILYLQTELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLL 204 (311)
T ss_dssp EEEEEEECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTC
T ss_pred EEEEEEecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceee
Confidence 999999999 77999888753 4569999999999999999999998 89999999999999999999999999998
Q ss_pred ccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeee
Q 002358 759 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 838 (931)
Q Consensus 759 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 838 (931)
....... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+.... . . ..+..+...
T Consensus 205 ~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~-----~-~----~~~~~~~~~- 270 (311)
T 3p1a_A 205 VELGTAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE-----G-W----QQLRQGYLP- 270 (311)
T ss_dssp EECC--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH-----H-H----HHHTTTCCC-
T ss_pred eecccCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc-----H-H----HHHhccCCC-
Confidence 7654332 2233458999999999876 78999999999999999999977664211 1 1 111111111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 839 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 839 i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
+.+... ....+.+++.+||+.||++|||++|+++
T Consensus 271 ---~~~~~~----~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 271 ---PEFTAG----LSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ---HHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---cccccC----CCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 111111 2246889999999999999999999885
No 102
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.3e-37 Score=343.15 Aligned_cols=262 Identities=21% Similarity=0.307 Sum_probs=189.5
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc-hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEec
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 687 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 687 (931)
.|++.+.||+|+||.||+|..+ +|+.||+|+++.... ...+.+.+|++++++++||||+++++++..++..++||||+
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 85 (317)
T 2pmi_A 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFM 85 (317)
T ss_dssp -------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECC
T ss_pred ceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEec
Confidence 4667899999999999999876 689999999865432 23467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCC---CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccc
Q 002358 688 HNGTLRDRLHGSV---NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 764 (931)
Q Consensus 688 ~~gsL~~~L~~~~---~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~ 764 (931)
+ |+|.+++.... ....+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 86 ~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 161 (317)
T 2pmi_A 86 D-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP 161 (317)
T ss_dssp C-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETTSC
T ss_pred C-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecCCC
Confidence 8 69998876421 23468899999999999999999998 89999999999999999999999999999875433
Q ss_pred ccccccccccCCCccCCCccCC-CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcC---Ceeec-
Q 002358 765 LTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG---DVISI- 839 (931)
Q Consensus 765 ~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~---~~~~i- 839 (931)
... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ...+....... .....
T Consensus 162 ~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 162 VNT-FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQ---LKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp CCC-CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCSCCTTTCGGGG
T ss_pred ccc-CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCChhHhhhhh
Confidence 221 223458999999999876 4689999999999999999999999974433221 11111111100 00000
Q ss_pred ----ccccc------------cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 840 ----VDPVL------------IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 840 ----~d~~l------------~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
..+.+ ...........+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00000 00000112236889999999999999999999874
No 103
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=4.4e-37 Score=339.21 Aligned_cols=263 Identities=21% Similarity=0.310 Sum_probs=201.3
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCc---cchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
.|++.+.||+|+||.||+|... +|+.||+|+++.. .....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 33 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 112 (310)
T 2wqm_A 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 112 (310)
T ss_dssp GEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEe
Confidence 5777899999999999999875 7899999998752 23345678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccc
Q 002358 686 YMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 764 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~ 764 (931)
|+++|+|.+++.... ....+++..++.++.|+++||.|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 113 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~ 189 (310)
T 2wqm_A 113 LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189 (310)
T ss_dssp CCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred cCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence 999999999886422 34568999999999999999999998 89999999999999999999999999998865443
Q ss_pred ccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccc
Q 002358 765 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 844 (931)
Q Consensus 765 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 844 (931)
... .....|++.|+|||.+.+..++.++||||||+++|||++|+.||...... ...+.. .+..........
T Consensus 190 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~----~~~~~~~~~~~~--- 260 (310)
T 2wqm_A 190 TTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCK----KIEQCDYPPLPS--- 260 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC-HHHHHH----HHHTTCSCCCCT---
T ss_pred Ccc-ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh-HHHHHH----HhhcccCCCCcc---
Confidence 221 22345899999999999999999999999999999999999999743221 111211 122222211111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 845 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 845 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
.. ....+.+++.+||+.||++||+++||++.|+++.....
T Consensus 261 -~~----~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 261 -DH----YSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp -TT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred -cc----cCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 11 22368899999999999999999999999999887665
No 104
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.2e-37 Score=344.98 Aligned_cols=248 Identities=23% Similarity=0.351 Sum_probs=192.6
Q ss_pred HHHHhhccccCccCcEEEEEEEE----CCCcEEEEEEccCcc----chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCe
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKM----KDGKEVAVKIMADSC----SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 679 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~----~~g~~vAvK~~~~~~----~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~ 679 (931)
...|++.+.||+|+||.||+++. .+|+.||+|+++... ......+.+|++++++++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 34577889999999999999987 478999999997642 2234568899999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccc
Q 002358 680 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 759 (931)
Q Consensus 680 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~ 759 (931)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 9999999999999999874 3568899999999999999999998 899999999999999999999999999997
Q ss_pred cccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeec
Q 002358 760 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 839 (931)
Q Consensus 760 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i 839 (931)
....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... ...+ .... ...
T Consensus 170 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~---~i~~-~~~--- 238 (327)
T 3a62_A 170 ESIHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK---KTID---KILK-CKL--- 238 (327)
T ss_dssp ----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHH---HHHH-TCC---
T ss_pred ccccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH---HHHH---HHHh-CCC---
Confidence 6433222 223346899999999999999999999999999999999999999743321 1111 1111 111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 002358 840 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVL 879 (931)
Q Consensus 840 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~ 879 (931)
. .+......+.+++.+||+.+|++|| +++|+++
T Consensus 239 ---~----~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 239 ---N----LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ---C----CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ---C----CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 0 1112234678999999999999999 6777764
No 105
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=352.92 Aligned_cols=274 Identities=22% Similarity=0.308 Sum_probs=213.3
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEecCC--eEEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--QRILVYE 685 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~--~~~lV~E 685 (931)
.|.+.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|++++++++||||+++++++.... ..++|||
T Consensus 10 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e 89 (396)
T 4eut_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (396)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEC
T ss_pred ceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEe
Confidence 4567899999999999999987 48999999987543 233567889999999999999999999987655 7799999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccc----cCCCceEEecccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL----DINMRAKVSDFGLSRQA 761 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILl----d~~~~vkL~DFGla~~~ 761 (931)
|+++|+|.+++........+++..++.++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++..
T Consensus 90 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~ 166 (396)
T 4eut_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (396)
T ss_dssp CCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred cCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence 99999999999865444559999999999999999999998 899999999999999 77888999999999876
Q ss_pred cccccccccccccCCCccCCCccCC--------CCCCccchhHHHHHHHHHHHhCCCCCCccCcc-chhhHHHHHHHhhh
Q 002358 762 EEDLTHISSVARGTVGYLDPEYYGN--------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFG-AELNIVHWARSMIK 832 (931)
Q Consensus 762 ~~~~~~~~~~~~gt~~y~APE~l~~--------~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~-~~~~l~~~~~~~~~ 832 (931)
..... .....||+.|+|||++.. ..++.++|||||||++|||++|+.||...... ........+.....
T Consensus 167 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p 244 (396)
T 4eut_A 167 EDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (396)
T ss_dssp CCGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCC
T ss_pred cCCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCC
Confidence 44322 223458999999999864 56788999999999999999999999643322 11112111111111
Q ss_pred cCCeeecc-----------cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 833 KGDVISIV-----------DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 833 ~~~~~~i~-----------d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
......+. +..............+.+++.+||+.||++||+++|+++.+++++...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 11111100 001112334567778899999999999999999999999998887643
No 106
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.2e-37 Score=357.40 Aligned_cols=251 Identities=23% Similarity=0.305 Sum_probs=201.3
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc---chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
.+++.+.||+|+||.||+|+++ +++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+....++|||
T Consensus 70 ~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 149 (410)
T 3v8s_A 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVME 149 (410)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 4556789999999999999987 58899999986532 1233568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
|+++|+|.++++. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 150 ~~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~ 222 (410)
T 3v8s_A 150 YMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 222 (410)
T ss_dssp CCTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred CCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEeccceeEeeccCC
Confidence 9999999999874 358899999999999999999998 899999999999999999999999999998765544
Q ss_pred cccccccccCCCccCCCccCCCC----CCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccc
Q 002358 766 THISSVARGTVGYLDPEYYGNQQ----LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 841 (931)
Q Consensus 766 ~~~~~~~~gt~~y~APE~l~~~~----~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d 841 (931)
........||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+.... ...+......-.. .+
T Consensus 223 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~---~~~i~~~~~~~~~---p~ 296 (410)
T 3v8s_A 223 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT---YSKIMNHKNSLTF---PD 296 (410)
T ss_dssp EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HHHHHTHHHHCCC---CT
T ss_pred cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhH---HHHHHhccccccC---CC
Confidence 33344567999999999987654 78999999999999999999999974433211 1111110000000 00
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 002358 842 PVLIGNVKIESIWRIAEVAIQCVEQRGFS--RPKMQEIVLA 880 (931)
Q Consensus 842 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~--RPs~~evl~~ 880 (931)
.... ...+.+++.+||+.+|.+ ||+++||++.
T Consensus 297 ---~~~~----s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 297 ---DNDI----SKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp ---TCCC----CHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ---cccc----cHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0011 236789999999999988 9999998853
No 107
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-37 Score=347.33 Aligned_cols=244 Identities=23% Similarity=0.312 Sum_probs=198.8
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc---hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
.|.+.+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|+++++.++||||+++++++......++|||
T Consensus 10 ~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 89 (336)
T 3h4j_B 10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIE 89 (336)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred CEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEE
Confidence 4667899999999999999985 689999999864321 223578999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
|+ +|+|.+.+.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++.......
T Consensus 90 ~~-~g~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 90 YA-GGELFDYIVE---KKRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp CC-CEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred CC-CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 99 7899988863 4568999999999999999999998 899999999999999999999999999998754432
Q ss_pred cccccccccCCCccCCCccCCCCC-CccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccc
Q 002358 766 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 844 (931)
Q Consensus 766 ~~~~~~~~gt~~y~APE~l~~~~~-s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 844 (931)
. .....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.......... .+..+. .
T Consensus 163 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~-------~i~~~~------~-- 225 (336)
T 3h4j_B 163 F--LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK-------KVNSCV------Y-- 225 (336)
T ss_dssp T--TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC-------CCCSSC------C--
T ss_pred c--cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH-------HHHcCC------C--
Confidence 2 234469999999999988776 789999999999999999999997433221100 000000 0
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 845 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 845 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
..+......+.+++.+||+.||.+|||++|+++
T Consensus 226 --~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 226 --VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp --CCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred --CCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 111122336789999999999999999999975
No 108
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=341.69 Aligned_cols=266 Identities=24% Similarity=0.291 Sum_probs=198.3
Q ss_pred hhHHHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc-----hhhhhHHHHHHHHHhcC---CCCCcceeEEE
Q 002358 604 PELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-----HRTQQFVTEVALLSRIH---HRNLVPLIGYC 674 (931)
Q Consensus 604 ~~l~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~-----~~~~~~~~E~~il~~l~---HpnIv~l~g~~ 674 (931)
+++....|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++ ||||+++++++
T Consensus 4 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~ 83 (308)
T 3g33_A 4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVC 83 (308)
T ss_dssp ------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEE
T ss_pred CcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeee
Confidence 4555667888999999999999999975 689999999864321 12346778888887775 99999999999
Q ss_pred ecCC-----eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCc
Q 002358 675 EEEH-----QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR 749 (931)
Q Consensus 675 ~~~~-----~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~ 749 (931)
.... ..++||||+. |+|.+++... ....+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.
T Consensus 84 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 84 ATSRTDREIKVTLVFEHVD-QDLRTYLDKA-PPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp EECCSSSEEEEEEEEECCC-CBHHHHHHTC-CTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSC
T ss_pred eccCCCCceeEEEEehhhh-cCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCC
Confidence 7654 5789999997 6999998854 23448999999999999999999998 89999999999999999999
Q ss_pred eEEecccccccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHH
Q 002358 750 AKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS 829 (931)
Q Consensus 750 vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~ 829 (931)
+||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+..
T Consensus 159 ~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~i~~ 233 (308)
T 3g33_A 159 VKLADFGLARIYSYQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ---LGKIFD 233 (308)
T ss_dssp EEECSCSCTTTSTTCCC--SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH---HHHHHH
T ss_pred EEEeeCccccccCCCcc--cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHH
Confidence 99999999986543322 2345689999999999999999999999999999999999999974433221 111111
Q ss_pred hhhc---CCeeecc---cccccC-------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 830 MIKK---GDVISIV---DPVLIG-------NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 830 ~~~~---~~~~~i~---d~~l~~-------~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.... ....... ...... ....+....+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 234 LIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 1110 0000000 000000 001122346789999999999999999999874
No 109
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6e-37 Score=338.47 Aligned_cols=260 Identities=21% Similarity=0.317 Sum_probs=199.3
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc---hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 684 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~ 684 (931)
..|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++++++..++..++||
T Consensus 34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 2h34_A 34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDM 113 (309)
T ss_dssp CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEE
Confidence 45677899999999999999986 688999999875432 23467899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccc
Q 002358 685 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 764 (931)
Q Consensus 685 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~ 764 (931)
||+++++|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||++......
T Consensus 114 e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 114 RLINGVDLAAMLRR---QGPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp ECCCCEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EecCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999974 3568999999999999999999998 89999999999999999999999999999876544
Q ss_pred ccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccc
Q 002358 765 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 844 (931)
Q Consensus 765 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 844 (931)
.........|++.|+|||.+.+..++.++||||||+++|||++|+.||...... .+...+..... .. ...
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~-~~--~~~ 257 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-------VMGAHINQAIP-RP--STV 257 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH-------HHHHHHHSCCC-CG--GGT
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH-------HHHHHhccCCC-Cc--ccc
Confidence 333333456899999999999999999999999999999999999999743221 11112211111 00 011
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHhhhhhh
Q 002358 845 IGNVKIESIWRIAEVAIQCVEQRGFSRP-KMQEIVLAIQDSIKIE 888 (931)
Q Consensus 845 ~~~~~~~~~~~l~~li~~Cl~~dP~~RP-s~~evl~~L~~~~~~~ 888 (931)
+......+.+++.+||+.+|++|| +++++++.|++.....
T Consensus 258 ----~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 258 ----RPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp ----STTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred ----CCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 111223688999999999999999 9999999999876544
No 110
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=349.02 Aligned_cols=269 Identities=19% Similarity=0.211 Sum_probs=201.1
Q ss_pred hHHHHHHhhccccCccCcEEEEEEEEC----CCcEEEEEEccCccch-----------hhhhHHHHHHHHHhcCCCCCcc
Q 002358 605 ELEEATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSCSH-----------RTQQFVTEVALLSRIHHRNLVP 669 (931)
Q Consensus 605 ~l~~~~~~~~~~LG~G~fG~Vy~a~~~----~g~~vAvK~~~~~~~~-----------~~~~~~~E~~il~~l~HpnIv~ 669 (931)
++....|.+.+.||+|+||.||+|.+. .+..+|+|++...... ..+.+.+|+..++.++||||++
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~ 112 (345)
T 2v62_A 33 DMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPL 112 (345)
T ss_dssp CTTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCC
T ss_pred cccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcce
Confidence 344456778899999999999999986 5788999998754321 1234778899999999999999
Q ss_pred eeEEEec----CCeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCcccc
Q 002358 670 LIGYCEE----EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD 745 (931)
Q Consensus 670 l~g~~~~----~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld 745 (931)
+++++.. ....++||||+ +++|.+++... ..+++..++.++.||++||+|||+ .+|+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~ 185 (345)
T 2v62_A 113 FYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQN---GTFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLG 185 (345)
T ss_dssp EEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGG---GBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEE
T ss_pred eecccccccCCCcEEEEEEecc-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEc
Confidence 9999987 67899999999 99999998743 378999999999999999999998 8999999999999999
Q ss_pred CCC--ceEEecccccccccccccc------cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCc
Q 002358 746 INM--RAKVSDFGLSRQAEEDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDF 817 (931)
Q Consensus 746 ~~~--~vkL~DFGla~~~~~~~~~------~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~ 817 (931)
.++ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 186 ~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~ 265 (345)
T 2v62_A 186 YKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLK 265 (345)
T ss_dssp SSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTT
T ss_pred cCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 877 9999999999876433211 11344689999999999999999999999999999999999999963222
Q ss_pred cchhhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 002358 818 GAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 886 (931)
Q Consensus 818 ~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 886 (931)
. .... .......... ....+..... .......+.+++.+||+.+|++||++++|++.|++...
T Consensus 266 ~-~~~~-~~~~~~~~~~-~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 266 D-PVAV-QTAKTNLLDE-LPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp C-HHHH-HHHHHHHHHT-TTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred c-cHHH-HHHHHhhccc-ccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 1 1111 1111111111 1111100000 00122368899999999999999999999999987643
No 111
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.4e-39 Score=351.89 Aligned_cols=260 Identities=26% Similarity=0.417 Sum_probs=188.5
Q ss_pred HHhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHh--cCCCCCcceeEEEecCC----eEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSR--IHHRNLVPLIGYCEEEH----QRILV 683 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~--l~HpnIv~l~g~~~~~~----~~~lV 683 (931)
.|.+.+.||+|+||.||+|++. ++.||||++... ..+.+.+|.+++.. ++||||+++++++.... ..++|
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 79 (303)
T 3gxj_A 4 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred eeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence 4667899999999999999876 899999998643 34567788888888 78999999999998776 78999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhh--------hcCCCCeEecCCCCCCccccCCCceEEecc
Q 002358 684 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH--------TGCNPGIIHRDVKSSNILLDINMRAKVSDF 755 (931)
Q Consensus 684 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH--------~~~~~~ivH~DIkp~NILld~~~~vkL~DF 755 (931)
|||+++|+|.+++.. ..+++..++.++.|++.||+||| + .+|+||||||+|||++.++.+||+||
T Consensus 80 ~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 80 SDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EECCTTCCHHHHHHH----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCB---C-CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred EeccCCCCHHHHHhc----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccC---CCEeeCcCCHHHeEECCCCCEEEeec
Confidence 999999999999964 35788889999999999999999 6 89999999999999999999999999
Q ss_pred cccccccccccc---cccccccCCCccCCCccCCC------CCCccchhHHHHHHHHHHHhC----------CCCCCccC
Q 002358 756 GLSRQAEEDLTH---ISSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISG----------KKPVSVED 816 (931)
Q Consensus 756 Gla~~~~~~~~~---~~~~~~gt~~y~APE~l~~~------~~s~ksDVwSlGvlL~eLltG----------~~Pf~~~~ 816 (931)
|+++........ ......||+.|+|||++.+. .++.++|||||||++|||++| +.||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 999765443322 12234689999999998776 445689999999999999999 66664221
Q ss_pred cc--chhhHHHHHHHhhhcCCeeecccccccCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 817 FG--AELNIVHWARSMIKKGDVISIVDPVLIGN-VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 817 ~~--~~~~l~~~~~~~~~~~~~~~i~d~~l~~~-~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
.. ....... .+..... .+.+... ...+....+.+++.+||+.||++|||++||++.|+++...+
T Consensus 233 ~~~~~~~~~~~----~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 233 PSDPSVEEMRK----VVCEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp C-CCCCC-CHH----HHTTSCC----CCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred CCCccHHHHHH----HHHHhhc----CCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 11 0011111 1111111 1111111 12356678999999999999999999999999999886544
No 112
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=9.5e-38 Score=350.49 Aligned_cols=246 Identities=25% Similarity=0.376 Sum_probs=200.6
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc---chhhhhHHHHHHHHHhc-CCCCCcceeEEEecCCeEEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILV 683 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~~~~lV 683 (931)
..+++.+.||+|+||.||+|+++ +|+.||||+++... ....+.+..|..++..+ +||||+++++++.+.+..++|
T Consensus 17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv 96 (345)
T 1xjd_A 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 96 (345)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEE
Confidence 34667899999999999999987 58999999997542 23345678899999887 899999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccc
Q 002358 684 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 763 (931)
Q Consensus 684 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~ 763 (931)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 97 ~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 97 MEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 999999999999974 3568999999999999999999998 8999999999999999999999999999986432
Q ss_pred cccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccccc
Q 002358 764 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 843 (931)
Q Consensus 764 ~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~ 843 (931)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .+.+ .+..+.. .
T Consensus 171 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~----~i~~~~~------~ 236 (345)
T 1xjd_A 171 GDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE---ELFH----SIRMDNP------F 236 (345)
T ss_dssp TTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHCCC------C
T ss_pred CCC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH---HHHH----HHHhCCC------C
Confidence 221 233456999999999999999999999999999999999999999743321 1111 1111111 1
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHH-HHH
Q 002358 844 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQ-EIV 878 (931)
Q Consensus 844 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~-evl 878 (931)
.... ....+.+++.+||+.+|++||++. ||+
T Consensus 237 ~p~~----~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 237 YPRW----LEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CCTT----SCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CCcc----cCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 1111 223678999999999999999997 654
No 113
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=5e-37 Score=336.62 Aligned_cols=258 Identities=29% Similarity=0.460 Sum_probs=202.3
Q ss_pred HhhccccCccCcEEEEEEEECC----CcEEEEEEccCccc-hhhhhHHHHHHHHHhcCCCCCcceeEEEe-cCCeEEEEE
Q 002358 611 NNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCE-EEHQRILVY 684 (931)
Q Consensus 611 ~~~~~~LG~G~fG~Vy~a~~~~----g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~-~~~~~~lV~ 684 (931)
+++.+.||+|+||.||+|.+.+ ...||+|.+..... ...+.+.+|+.++++++||||+++++++. .++..++||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 106 (298)
T 3f66_A 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 106 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence 5567899999999999998753 23689999876433 34577999999999999999999999864 456789999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccc
Q 002358 685 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 764 (931)
Q Consensus 685 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~ 764 (931)
||+++|+|.+++.. ....+++..++.++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 107 e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 107 PYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp ECCTTCBHHHHHHC--TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred eCCCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999999974 34568899999999999999999998 89999999999999999999999999999875443
Q ss_pred cc---ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeecc
Q 002358 765 LT---HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 840 (931)
Q Consensus 765 ~~---~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~ 840 (931)
.. .......+|+.|+|||.+.+..++.++||||||+++|||++ |..||....... ...... .+... .
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~~~~~----~~~~~--~ 252 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLL----QGRRL--L 252 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HHHHHH----TTCCC--C
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HHHHHh----cCCCC--C
Confidence 22 12233457889999999998899999999999999999999 555554322211 111111 11110 0
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 841 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 841 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
. +......+.+++.+||+.+|++||+++|+++.|+++.....
T Consensus 253 ~-------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 253 Q-------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp C-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred C-------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 0 11122368899999999999999999999999999877554
No 114
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=355.86 Aligned_cols=253 Identities=24% Similarity=0.258 Sum_probs=200.7
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc---chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 684 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~ 684 (931)
..+++.+.||+|+||.||+|+.+ +|+.||||++++.. ....+.+.+|..++.+++||||+++++++.+.+..++||
T Consensus 61 ~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVm 140 (412)
T 2vd5_A 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVM 140 (412)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred hhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 34556789999999999999986 68999999986532 223456889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccc
Q 002358 685 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 764 (931)
Q Consensus 685 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~ 764 (931)
||+++|+|.+++... +..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 141 E~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~ 215 (412)
T 2vd5_A 141 EYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD 215 (412)
T ss_dssp CCCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred cCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeechhheeccCC
Confidence 999999999999742 3468999999999999999999998 89999999999999999999999999999876554
Q ss_pred ccccccccccCCCccCCCccC-------CCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCee
Q 002358 765 LTHISSVARGTVGYLDPEYYG-------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 837 (931)
Q Consensus 765 ~~~~~~~~~gt~~y~APE~l~-------~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~ 837 (931)
.........||+.|+|||++. ...++.++|||||||++|||++|+.||...+.... ...+......-..
T Consensus 216 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~---~~~i~~~~~~~~~- 291 (412)
T 2vd5_A 216 GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET---YGKIVHYKEHLSL- 291 (412)
T ss_dssp SCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HHHHHTHHHHCCC-
T ss_pred CccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH---HHHHHhcccCcCC-
Confidence 433334457999999999986 46789999999999999999999999974433211 1111110000001
Q ss_pred ecccccccCCCCHHHHHHHHHHHHHccccCCCCC---CCHHHHHH
Q 002358 838 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSR---PKMQEIVL 879 (931)
Q Consensus 838 ~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~R---Ps~~evl~ 879 (931)
+...... ...+.+++.+||+ +|++| |+++||++
T Consensus 292 ----p~~~~~~----s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 292 ----PLVDEGV----PEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp ----C----CC----CHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred ----CccccCC----CHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 1111112 2367899999999 99998 58888864
No 115
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4.5e-37 Score=333.89 Aligned_cols=255 Identities=24% Similarity=0.381 Sum_probs=207.1
Q ss_pred hhHHHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEec------
Q 002358 604 PELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE------ 676 (931)
Q Consensus 604 ~~l~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~------ 676 (931)
+......|++.+.||+|+||.||+|.+. +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (284)
T 2a19_B 6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81 (284)
T ss_dssp CHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred cchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence 4556677888999999999999999987 79999999987542 467789999999999999999998854
Q ss_pred ----------CCeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccC
Q 002358 677 ----------EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI 746 (931)
Q Consensus 677 ----------~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~ 746 (931)
....++||||+++|+|.+++... ....+++..++.++.|+++||.|||+ .+|+||||||+||+++.
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVD 157 (284)
T ss_dssp -------CCEEEEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEE
T ss_pred cccccccccCcceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcC
Confidence 45578999999999999999743 23568999999999999999999998 89999999999999999
Q ss_pred CCceEEecccccccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHH
Q 002358 747 NMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHW 826 (931)
Q Consensus 747 ~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~ 826 (931)
++.+||+|||++........ .....|++.|+|||.+.+..++.++||||||+++|||++|..|+... ....
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-----~~~~-- 228 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-----SKFF-- 228 (284)
T ss_dssp TTEEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-----HHHH--
T ss_pred CCCEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-----HHHH--
Confidence 99999999999987654322 22345899999999999999999999999999999999999887411 1111
Q ss_pred HHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 827 ARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 827 ~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
..+..+... ..++ ..+.+++.+||+.||++||++.|+++.|+.+.+...
T Consensus 229 --~~~~~~~~~--------~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 229 --TDLRDGIIS--------DIFD----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp --HHHHTTCCC--------TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred --HHhhccccc--------ccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 111112111 1122 357899999999999999999999999998765443
No 116
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.1e-37 Score=350.19 Aligned_cols=250 Identities=23% Similarity=0.333 Sum_probs=198.1
Q ss_pred ccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEecCCCCH
Q 002358 614 CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGTL 692 (931)
Q Consensus 614 ~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~gsL 692 (931)
.+.||+|+||.||+|... +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 467999999999999876 6899999999876556677899999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccc--cCCCceEEeccccccccccccccccc
Q 002358 693 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL--DINMRAKVSDFGLSRQAEEDLTHISS 770 (931)
Q Consensus 693 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILl--d~~~~vkL~DFGla~~~~~~~~~~~~ 770 (931)
.+.+.. ....+++..++.++.||++||+|||+ .+|+||||||+|||+ +.++.+||+|||+++....... ..
T Consensus 174 ~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~ 246 (373)
T 2x4f_A 174 FDRIID--ESYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LK 246 (373)
T ss_dssp HHHHHH--TGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CC
T ss_pred HHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--cc
Confidence 998864 23468999999999999999999998 899999999999999 5678899999999987644322 22
Q ss_pred ccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccCCCCH
Q 002358 771 VARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKI 850 (931)
Q Consensus 771 ~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~ 850 (931)
...||+.|+|||++.+..++.++|||||||++|||++|+.||....... . ........ . ... +......
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---~---~~~i~~~~-~-~~~-~~~~~~~-- 315 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE---T---LNNILACR-W-DLE-DEEFQDI-- 315 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH---H---HHHHHHTC-C-CSC-SGGGTTS--
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH---H---HHHHHhcc-C-CCC-hhhhccC--
Confidence 3458999999999999999999999999999999999999997443211 1 11111111 0 000 1111112
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH--HHHh
Q 002358 851 ESIWRIAEVAIQCVEQRGFSRPKMQEIVL--AIQD 883 (931)
Q Consensus 851 ~~~~~l~~li~~Cl~~dP~~RPs~~evl~--~L~~ 883 (931)
...+.+++.+||+.+|++||+++|+++ .+++
T Consensus 316 --~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~ 348 (373)
T 2x4f_A 316 --SEEAKEFISKLLIKEKSWRISASEALKHPWLSD 348 (373)
T ss_dssp --CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHC
T ss_pred --CHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCC
Confidence 236789999999999999999999986 4443
No 117
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.4e-36 Score=332.29 Aligned_cols=263 Identities=23% Similarity=0.320 Sum_probs=207.0
Q ss_pred HHhhccccCccCcEEEEEEEE-CCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEE-ecCCeEEEEEEec
Q 002358 610 TNNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYC-EEEHQRILVYEYM 687 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~-~~~~~~~lV~E~~ 687 (931)
.|++.+.||+|+||.||+|+. .+++.||||++.... ..+++.+|+++++.++|++++..+.++ ......++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 3uzp_A 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred EEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence 456789999999999999997 478999999986543 235688999999999998877776665 5667789999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccc---cCCCceEEeccccccccccc
Q 002358 688 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEED 764 (931)
Q Consensus 688 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILl---d~~~~vkL~DFGla~~~~~~ 764 (931)
+++|.+++... ...+++..++.++.|+++||+|||+ .+|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 88 -~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 88 -GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp -CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred -CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99999999743 3568999999999999999999998 899999999999999 58899999999999876543
Q ss_pred ccc------cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeee
Q 002358 765 LTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 838 (931)
Q Consensus 765 ~~~------~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 838 (931)
... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..............+.........
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-- 239 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-- 239 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH--
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch--
Confidence 321 123456899999999999999999999999999999999999999854433222222222111111100
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 839 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 839 i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
+.+...++ ..+.+++.+||+.+|++||+++||++.|+++.....
T Consensus 240 ---~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 240 ---EVLCKGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp ---HHHTTTSC----HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ---HHHHhhCC----HHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 01111222 368899999999999999999999999999876543
No 118
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-37 Score=346.00 Aligned_cols=263 Identities=29% Similarity=0.485 Sum_probs=204.6
Q ss_pred HHHHHHhhccccCccCcEEEEEEEECC-----CcEEEEEEccCccc-hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCe
Q 002358 606 LEEATNNFCKKIGKGSFGSVYYGKMKD-----GKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 679 (931)
Q Consensus 606 l~~~~~~~~~~LG~G~fG~Vy~a~~~~-----g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~ 679 (931)
+....+.+.+.||+|+||.||+|.++. +..||||+++.... .....+.+|++++++++||||+++++++...+.
T Consensus 41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 120 (333)
T 1mqb_A 41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120 (333)
T ss_dssp CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC
Confidence 334455667899999999999998753 24699999976433 345679999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccc
Q 002358 680 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 759 (931)
Q Consensus 680 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~ 759 (931)
.++||||+++|+|.+++... ...+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 121 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp EEEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred cEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcch
Confidence 99999999999999999752 4568999999999999999999998 899999999999999999999999999998
Q ss_pred cccccccc--cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCe
Q 002358 760 QAEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDV 836 (931)
Q Consensus 760 ~~~~~~~~--~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 836 (931)
........ ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... .+.. .+..+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~---~~~~----~~~~~~~ 268 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH---EVMK----AINDGFR 268 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHH----HHHTTCC
T ss_pred hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH---HHHH----HHHCCCc
Confidence 76443221 1222346788999999998899999999999999999999 99999633221 1211 1222211
Q ss_pred eecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 837 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 837 ~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
.. .+......+.+++.+||+.+|++||+++|+++.|+++.....
T Consensus 269 ~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 269 LP---------TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp CC---------CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred CC---------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 00 111223468899999999999999999999999998876443
No 119
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3e-37 Score=337.97 Aligned_cols=260 Identities=27% Similarity=0.398 Sum_probs=205.6
Q ss_pred hhccccCccCcEEEEEEEECC-C---cEEEEEEccCccc-hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeE-EEEEE
Q 002358 612 NFCKKIGKGSFGSVYYGKMKD-G---KEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR-ILVYE 685 (931)
Q Consensus 612 ~~~~~LG~G~fG~Vy~a~~~~-g---~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~-~lV~E 685 (931)
+..+.||+|+||.||+|.+.+ + ..||+|++..... ...+.+.+|++++++++||||+++++++.+.+.. ++|||
T Consensus 24 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e 103 (298)
T 3pls_A 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLP 103 (298)
T ss_dssp EEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEC
T ss_pred ccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEe
Confidence 345889999999999998643 2 3799999876433 4457899999999999999999999999776655 89999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
|+.+|+|.+++.. ....+++..+..++.|+++||+|||+ .+++||||||+|||++.++.+||+|||+++......
T Consensus 104 ~~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 104 YMCHGDLLQFIRS--PQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp CCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred cccCCCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999975 34668999999999999999999998 899999999999999999999999999998654332
Q ss_pred c---ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccc
Q 002358 766 T---HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 842 (931)
Q Consensus 766 ~---~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~ 842 (931)
. .......+++.|+|||.+.+..++.++||||||+++|||++|..|+..... .......+. .+....
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~--~~~~~~~~~----~~~~~~---- 248 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID--PFDLTHFLA----QGRRLP---- 248 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC--GGGHHHHHH----TTCCCC----
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC--HHHHHHHhh----cCCCCC----
Confidence 1 122334578899999999999999999999999999999996655532221 112222211 111100
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcCC
Q 002358 843 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGG 891 (931)
Q Consensus 843 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 891 (931)
.+......+.+++.+||+.+|++|||++|+++.|+++.......
T Consensus 249 -----~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 249 -----QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred -----CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 11112236889999999999999999999999999998766543
No 120
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=340.83 Aligned_cols=263 Identities=23% Similarity=0.298 Sum_probs=197.3
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc--hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEe
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
.|++.+.||+|+||.||+|.+. +|+.||+|++..... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (311)
T 4agu_A 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEY 83 (311)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEe
Confidence 3566789999999999999987 589999999865433 2346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccc
Q 002358 687 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 766 (931)
Q Consensus 687 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~ 766 (931)
+++++|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 84 ~~~~~l~~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 84 CDHTVLHELDRY---QRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp CSEEHHHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred CCCchHHHHHhh---hcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 999999998873 4568999999999999999999998 8999999999999999999999999999987543322
Q ss_pred ccccccccCCCccCCCccCC-CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHH--------HhhhcCCe-
Q 002358 767 HISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWAR--------SMIKKGDV- 836 (931)
Q Consensus 767 ~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~--------~~~~~~~~- 836 (931)
. .....||+.|+|||.+.+ ..++.++||||+|+++|||++|+.||......+......... ........
T Consensus 158 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
T 4agu_A 158 Y-YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred c-cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccc
Confidence 2 223458999999999865 678999999999999999999999997544332221111100 00000000
Q ss_pred --eecccccccCC---CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 837 --ISIVDPVLIGN---VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 837 --~~i~d~~l~~~---~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
..+.++.-... ........+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00001100000 00112335789999999999999999999975
No 121
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=7.2e-37 Score=349.06 Aligned_cols=260 Identities=21% Similarity=0.289 Sum_probs=201.4
Q ss_pred HHhhccccCcc--CcEEEEEEEEC-CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEE
Q 002358 610 TNNFCKKIGKG--SFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 684 (931)
Q Consensus 610 ~~~~~~~LG~G--~fG~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~ 684 (931)
.|++.+.||+| +||.||+|+.+ +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 26 ~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 105 (389)
T 3gni_B 26 CYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT 105 (389)
T ss_dssp GEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEE
Confidence 46678999999 99999999987 69999999987543 334567888999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccc
Q 002358 685 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 764 (931)
Q Consensus 685 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~ 764 (931)
||+++|+|.+++... ....+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||++......
T Consensus 106 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 106 SFMAYGSAKDLICTH-FMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISH 181 (389)
T ss_dssp ECCTTCBHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred EccCCCCHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence 999999999998754 23568999999999999999999998 89999999999999999999999999988654322
Q ss_pred cc------ccccccccCCCccCCCccCC--CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCe
Q 002358 765 LT------HISSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 836 (931)
Q Consensus 765 ~~------~~~~~~~gt~~y~APE~l~~--~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 836 (931)
.. .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... ..... +..
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~-----~~~ 254 (389)
T 3gni_B 182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML--LEKLN-----GTV 254 (389)
T ss_dssp TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH--HHC----------
T ss_pred cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH--HHHhc-----CCC
Confidence 11 11223368999999999987 67999999999999999999999999744332211 11000 000
Q ss_pred eecccc------------------------------cc------cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002358 837 ISIVDP------------------------------VL------IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 880 (931)
Q Consensus 837 ~~i~d~------------------------------~l------~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 880 (931)
..+.+. .. ...........+.+++.+||+.||++|||++|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 255 PCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ---------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000000 00 000111122368899999999999999999999853
No 122
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=341.73 Aligned_cols=262 Identities=23% Similarity=0.313 Sum_probs=204.0
Q ss_pred HHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEe----cCCeEEE
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCE----EEHQRIL 682 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~----~~~~~~l 682 (931)
...|++.+.||+|+||.||+++.. +++.||||++........+.+.+|++++++++||||+++++++. .....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 345777899999999999999984 78999999987655566778999999999999999999999986 3457889
Q ss_pred EEEecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccc
Q 002358 683 VYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 761 (931)
Q Consensus 683 V~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~ 761 (931)
||||+++|+|.+++.... ....+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 999999999999887522 34668999999999999999999998 89999999999999999999999999998764
Q ss_pred cccccc--------cccccccCCCccCCCccCCCC---CCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHh
Q 002358 762 EEDLTH--------ISSVARGTVGYLDPEYYGNQQ---LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM 830 (931)
Q Consensus 762 ~~~~~~--------~~~~~~gt~~y~APE~l~~~~---~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~ 830 (931)
...... ......||+.|+|||.+.... ++.++||||||+++|||++|+.||....... ......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~---- 259 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG-DSVALA---- 259 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT-SCHHHH----
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc-chhhHH----
Confidence 321111 011234799999999987654 6889999999999999999999996311111 011111
Q ss_pred hhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 002358 831 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 886 (931)
Q Consensus 831 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 886 (931)
.... . .. .. .......+.+++.+||+.||++||+++|+++.|+.+..
T Consensus 260 ~~~~-~-~~---~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 260 VQNQ-L-SI---PQ----SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp HHCC----C---CC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred hhcc-C-CC---Cc----cccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 1110 0 00 00 11122368899999999999999999999999998754
No 123
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=8.3e-37 Score=331.18 Aligned_cols=250 Identities=21% Similarity=0.280 Sum_probs=203.2
Q ss_pred HHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEe
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
...|++.+.||+|+||.||+|..+ +++.||+|++........+.+.+|++++++++||||+++++++.+....++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 456778899999999999999987 4779999998776555677899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccc---cCCCceEEecccccccccc
Q 002358 687 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEE 763 (931)
Q Consensus 687 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILl---d~~~~vkL~DFGla~~~~~ 763 (931)
+++++|.+.+.. ...+++..+..++.|+++||+|||+ .+|+||||||+||++ +.++.+||+|||++.....
T Consensus 88 ~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 88 CTGGELFERVVH---KRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp CCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred cCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 999999998874 4568999999999999999999998 899999999999999 7889999999999986543
Q ss_pred cccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccccc
Q 002358 764 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 843 (931)
Q Consensus 764 ~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~ 843 (931)
... .....||+.|+|||.+.+. ++.++||||||+++|||++|+.||....... ... .+..+.... . ..
T Consensus 162 ~~~--~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~----~~~~~~~~~-~-~~ 229 (277)
T 3f3z_A 162 GKM--MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE---VML----KIREGTFTF-P-EK 229 (277)
T ss_dssp TSC--BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH----HHHHCCCCC-C-HH
T ss_pred ccc--hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH---HHH----HHHhCCCCC-C-ch
Confidence 322 2334589999999998765 8999999999999999999999997433211 111 111111100 0 00
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 844 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 844 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.... ....+.+++.+||+.+|++||++.|+++
T Consensus 230 ~~~~----~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 230 DWLN----VSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred hhhc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0001 1236789999999999999999999975
No 124
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.3e-36 Score=337.54 Aligned_cols=251 Identities=24% Similarity=0.334 Sum_probs=204.6
Q ss_pred HHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccch------hhhhHHHHHHHHHhcCCCCCcceeEEEecCCeE
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 680 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~------~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~ 680 (931)
...|++.+.||+|+||.||+|..+ +|+.||+|++...... ..+.+.+|++++++++||||+++++++.+....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 567888999999999999999987 6899999998654321 346799999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCC----ceEEeccc
Q 002358 681 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFG 756 (931)
Q Consensus 681 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~----~vkL~DFG 756 (931)
++||||+++++|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 999999999999999973 4568999999999999999999998 8999999999999999887 79999999
Q ss_pred ccccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCe
Q 002358 757 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 836 (931)
Q Consensus 757 la~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 836 (931)
++........ .....||+.|+|||.+.+..++.++||||||+++|||++|+.||....... ... . +.....
T Consensus 165 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~---~-i~~~~~ 235 (321)
T 2a2a_A 165 LAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE---TLA---N-ITSVSY 235 (321)
T ss_dssp TCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH---HHH---H-HHTTCC
T ss_pred cceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH---HHH---H-HHhccc
Confidence 9987654322 233458999999999999999999999999999999999999997433211 111 1 111111
Q ss_pred eecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 837 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 837 ~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
..++...... ...+.+++.+||+.||++|||++|+++
T Consensus 236 --~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 --DFDEEFFSHT----SELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp --CCCHHHHTTC----CHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred --ccChhhhccc----CHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0111111111 236789999999999999999999985
No 125
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.1e-38 Score=349.05 Aligned_cols=266 Identities=28% Similarity=0.443 Sum_probs=210.7
Q ss_pred HHHHhhccccCccCcEEEEEEEE-----CCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCC--eE
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKM-----KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--QR 680 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~-----~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~--~~ 680 (931)
...+++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 44567789999999999999985 368899999998766666788999999999999999999999987644 67
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccc
Q 002358 681 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 760 (931)
Q Consensus 681 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~ 760 (931)
++||||+++|+|.+++... ...+++..++.++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 120 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~ 194 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKV 194 (326)
T ss_dssp EEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence 9999999999999999753 3568999999999999999999998 8999999999999999999999999999987
Q ss_pred ccccccc--cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCcc---------chhhHHHHHHH
Q 002358 761 AEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFG---------AELNIVHWARS 829 (931)
Q Consensus 761 ~~~~~~~--~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~---------~~~~l~~~~~~ 829 (931)
....... ......++..|+|||.+.+..++.++||||||+++|||++|..|+...... ........+..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (326)
T 2w1i_A 195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 274 (326)
T ss_dssp CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHH
Confidence 6543221 122344677899999998888999999999999999999999998622110 00111111222
Q ss_pred hhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 002358 830 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 887 (931)
Q Consensus 830 ~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 887 (931)
.+..+... ..+......+.+++.+||+.+|++||+++||++.|+++...
T Consensus 275 ~~~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 275 LLKNNGRL---------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHTTCCC---------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhhcCCCC---------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 22221111 11122234688999999999999999999999999988754
No 126
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.4e-37 Score=346.79 Aligned_cols=243 Identities=23% Similarity=0.299 Sum_probs=201.4
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc---chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
.|++.+.||+|+||.||+|+.+ +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+....++|||
T Consensus 42 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 121 (350)
T 1rdq_E 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121 (350)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred HCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEc
Confidence 4566789999999999999987 68999999986532 1234678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 122 ~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 122 YVAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp CCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred CCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 9999999999974 3568999999999999999999998 89999999999999999999999999999875432
Q ss_pred cccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccccccc
Q 002358 766 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 845 (931)
Q Consensus 766 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 845 (931)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. ...+ .+..+.. .+
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~----~i~~~~~------~~- 257 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYE----KIVSGKV------RF- 257 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHCCC------CC-
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH---HHHH----HHHcCCC------CC-
Confidence 22346899999999999999999999999999999999999999743321 1111 1111211 11
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 002358 846 GNVKIESIWRIAEVAIQCVEQRGFSRPK-----MQEIVL 879 (931)
Q Consensus 846 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs-----~~evl~ 879 (931)
+......+.+++.+||+.||++||+ ++||++
T Consensus 258 ---p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 258 ---PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp ---CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred ---CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 1112236789999999999999998 777764
No 127
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-37 Score=350.79 Aligned_cols=260 Identities=29% Similarity=0.460 Sum_probs=197.4
Q ss_pred HhhccccCccCcEEEEEEEECC--C--cEEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEec-CCeEEEEE
Q 002358 611 NNFCKKIGKGSFGSVYYGKMKD--G--KEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE-EHQRILVY 684 (931)
Q Consensus 611 ~~~~~~LG~G~fG~Vy~a~~~~--g--~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~~lV~ 684 (931)
+++.+.||+|+||.||+|.+.+ + ..||+|.++... ....++|.+|+.++++++||||+++++++.. ++..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 4557899999999999998752 2 368999987543 3456789999999999999999999998754 56789999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccc
Q 002358 685 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 764 (931)
Q Consensus 685 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~ 764 (931)
||+++|+|.+++.. ....+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 171 e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 171 PYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp ECCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred ECCCCCCHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999999974 34568899999999999999999998 89999999999999999999999999999865432
Q ss_pred ccc---cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeecc
Q 002358 765 LTH---ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 840 (931)
Q Consensus 765 ~~~---~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~ 840 (931)
... ......+|+.|+|||.+.+..++.++|||||||++|||++ |..||......+ ....+ ..+... .
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~~~----~~~~~~--~ 316 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYL----LQGRRL--L 316 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHHHH----HTTCCC--C
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHHHH----HcCCCC--C
Confidence 211 1223457789999999999999999999999999999999 677776433222 11111 111110 0
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcCC
Q 002358 841 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGG 891 (931)
Q Consensus 841 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 891 (931)
. +......+.+++.+||+.+|++||+++|+++.|+++.....+.
T Consensus 317 ~-------p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 317 Q-------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp C-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred C-------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 1 1122346889999999999999999999999999988765433
No 128
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.5e-37 Score=350.45 Aligned_cols=204 Identities=26% Similarity=0.322 Sum_probs=177.1
Q ss_pred hhhHHHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcC-----CCCCcceeEEEec
Q 002358 603 LPELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-----HRNLVPLIGYCEE 676 (931)
Q Consensus 603 ~~~l~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-----HpnIv~l~g~~~~ 676 (931)
..++....|++.++||+|+||.||+|++. +++.||||+++.. ....+.+..|+++++.++ ||||+++++++..
T Consensus 29 ~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~ 107 (360)
T 3llt_A 29 KGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY 107 (360)
T ss_dssp TTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE
T ss_pred cceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE
Confidence 34455567888999999999999999985 6899999998743 334566788999999996 9999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccC----------
Q 002358 677 EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---------- 746 (931)
Q Consensus 677 ~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~---------- 746 (931)
.+..++||||+ +++|.+++... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.
T Consensus 108 ~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~~~~ 182 (360)
T 3llt_A 108 YDHMCLIFEPL-GPSLYEIITRN-NYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSLITV 182 (360)
T ss_dssp TTEEEEEECCC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCCEEEEEE
T ss_pred CCeeEEEEcCC-CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccccccccch
Confidence 99999999999 99999999854 23458999999999999999999998 89999999999999975
Q ss_pred ---------------CCceEEecccccccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCC
Q 002358 747 ---------------NMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKP 811 (931)
Q Consensus 747 ---------------~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~P 811 (931)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p 258 (360)
T 3llt_A 183 RRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLL 258 (360)
T ss_dssp ECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred hcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCC
Confidence 788999999999864432 2234689999999999999999999999999999999999999
Q ss_pred CCccC
Q 002358 812 VSVED 816 (931)
Q Consensus 812 f~~~~ 816 (931)
|....
T Consensus 259 f~~~~ 263 (360)
T 3llt_A 259 FRTHE 263 (360)
T ss_dssp CCCSS
T ss_pred CCCCc
Confidence 97543
No 129
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=347.32 Aligned_cols=249 Identities=23% Similarity=0.336 Sum_probs=194.0
Q ss_pred HHhhccccCccCcEEEEEEEECCCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCC--CCCcceeEEEecCCeEEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHH--RNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~H--pnIv~l~g~~~~~~~~~lV~E 685 (931)
.|++.+.||+|+||.||++...+++.||||++.... ....+.+.+|++++++++| |||+++++++......++|||
T Consensus 10 ~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e 89 (343)
T 3dbq_A 10 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 89 (343)
T ss_dssp EEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe
Confidence 356789999999999999999889999999986542 3345778999999999976 999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
+.+|+|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++ ++.+||+|||+++......
T Consensus 90 -~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 90 -CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp -CCSEEHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred -CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 568899999984 4578999999999999999999998 8999999999999997 6789999999998765433
Q ss_pred cc-cccccccCCCccCCCccCC-----------CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhc
Q 002358 766 TH-ISSVARGTVGYLDPEYYGN-----------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 833 (931)
Q Consensus 766 ~~-~~~~~~gt~~y~APE~l~~-----------~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~ 833 (931)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... . .......+.
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~---~~~~~~~~~- 235 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--Q---ISKLHAIID- 235 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS--H---HHHHHHHHC-
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh--H---HHHHHHHhc-
Confidence 22 2334569999999999854 6788999999999999999999999963211 1 111111111
Q ss_pred CCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002358 834 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 880 (931)
Q Consensus 834 ~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 880 (931)
+......+......+.+++.+||+.||++|||++|+++.
T Consensus 236 --------~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 236 --------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp --------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --------CCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 111111121222367899999999999999999999854
No 130
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.3e-37 Score=345.11 Aligned_cols=262 Identities=24% Similarity=0.427 Sum_probs=210.7
Q ss_pred HHHHHHhhccccCccCcEEEEEEEEC------CCcEEEEEEccCccc-hhhhhHHHHHHHHHhcCCCCCcceeEEEecCC
Q 002358 606 LEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH 678 (931)
Q Consensus 606 l~~~~~~~~~~LG~G~fG~Vy~a~~~------~g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~ 678 (931)
+....|++.+.||+|+||.||+|.+. .++.||+|++..... .....+.+|++++++++||||+++++++.+.+
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 101 (322)
T 1p4o_A 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 101 (322)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS
T ss_pred chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC
Confidence 34456778899999999999999865 367899999975433 34567899999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCC-------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceE
Q 002358 679 QRILVYEYMHNGTLRDRLHGSV-------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAK 751 (931)
Q Consensus 679 ~~~lV~E~~~~gsL~~~L~~~~-------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vk 751 (931)
..++||||+++|+|.+++.... ....+++..++.++.|+++||+|||+ .+|+||||||+||+++.++.+|
T Consensus 102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~~~~k 178 (322)
T 1p4o_A 102 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVK 178 (322)
T ss_dssp SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCEE
T ss_pred ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCCCeEE
Confidence 9999999999999999987421 12457899999999999999999998 8999999999999999999999
Q ss_pred Eecccccccccccccc-cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHH
Q 002358 752 VSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARS 829 (931)
Q Consensus 752 L~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~ 829 (931)
|+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... ....
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~---- 251 (322)
T 1p4o_A 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE---QVLR---- 251 (322)
T ss_dssp ECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH---HHHH----
T ss_pred ECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH---HHHH----
Confidence 9999999865443221 2223356889999999988889999999999999999999 89998743221 1111
Q ss_pred hhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 002358 830 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 886 (931)
Q Consensus 830 ~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 886 (931)
.+..+..... +......+.+++.+||+.+|++||+++|+++.|++...
T Consensus 252 ~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 252 FVMEGGLLDK---------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HHHcCCcCCC---------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 1222221111 11223468899999999999999999999999998754
No 131
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=5.6e-38 Score=350.00 Aligned_cols=264 Identities=26% Similarity=0.405 Sum_probs=210.6
Q ss_pred HHHHHhhccccCccCcEEEEEEEECC------CcEEEEEEccCccc-hhhhhHHHHHHHHHhc-CCCCCcceeEEEecCC
Q 002358 607 EEATNNFCKKIGKGSFGSVYYGKMKD------GKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 678 (931)
Q Consensus 607 ~~~~~~~~~~LG~G~fG~Vy~a~~~~------g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~ 678 (931)
....+++.+.||+|+||.||+|.+.. ++.||+|++..... ...+.+.+|+++++++ +||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 34556778999999999999999753 24799999976533 3456799999999999 8999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCC-----------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCC
Q 002358 679 QRILVYEYMHNGTLRDRLHGSV-----------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN 747 (931)
Q Consensus 679 ~~~lV~E~~~~gsL~~~L~~~~-----------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~ 747 (931)
..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEECCC
Confidence 9999999999999999986421 13457899999999999999999998 899999999999999999
Q ss_pred CceEEecccccccccccccc-cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHH
Q 002358 748 MRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVH 825 (931)
Q Consensus 748 ~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~ 825 (931)
+.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||++ |..||....... ....
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~ 278 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS--KFYK 278 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH--HHHH
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH--HHHH
Confidence 99999999999865443222 2233457889999999988889999999999999999999 999997433221 1111
Q ss_pred HHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 826 WARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 826 ~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
.+ ..+... ..+......+.+++.+||+.+|++||+++||++.|+++....
T Consensus 279 ~~----~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 279 LV----KDGYQM---------AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp HH----HHTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HH----hcCCCC---------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 11 111110 011112346889999999999999999999999999877654
No 132
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=5.9e-37 Score=344.78 Aligned_cols=249 Identities=24% Similarity=0.340 Sum_probs=187.3
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEec
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 687 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 687 (931)
..|++.+.||+|+||.||+|+++ +++.||||+++... ..+.+.+|++++++++||||+++++++.+....++||||+
T Consensus 53 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 130 (349)
T 2w4o_A 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV 130 (349)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred CcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence 34667899999999999999987 57899999987542 3467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccC---CCceEEeccccccccccc
Q 002358 688 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQAEED 764 (931)
Q Consensus 688 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~---~~~vkL~DFGla~~~~~~ 764 (931)
++|+|.+.+.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++. ++.+||+|||+++.....
T Consensus 131 ~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 131 TGGELFDRIVE---KGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CSCBHHHHHTT---CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred CCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 99999999973 4568999999999999999999998 89999999999999975 889999999999865432
Q ss_pred ccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccc
Q 002358 765 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 844 (931)
Q Consensus 765 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 844 (931)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ... ..+...... ...+ .
T Consensus 205 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~----~~i~~~~~~-~~~~-~ 274 (349)
T 2w4o_A 205 V--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ--FMF----RRILNCEYY-FISP-W 274 (349)
T ss_dssp ----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH--HHH----HHHHTTCCC-CCTT-T
T ss_pred c--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH--HHH----HHHHhCCCc-cCCc-h
Confidence 2 1233468999999999999999999999999999999999999996332211 111 111111111 1111 1
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 845 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 845 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
. ......+.+++.+||+.||++|||++|+++
T Consensus 275 ~----~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 275 W----DEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp T----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred h----hhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 122336789999999999999999999875
No 133
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.4e-37 Score=347.03 Aligned_cols=247 Identities=25% Similarity=0.334 Sum_probs=200.3
Q ss_pred HHHhhccccCccCcEEEEEEEECC-CcEEEEEEccCcc---chhhhhHHHHHHHHHhc-CCCCCcceeEEEecCCeEEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMKD-GKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILV 683 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~~-g~~vAvK~~~~~~---~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~~~~lV 683 (931)
..+++.+.||+|+||.||+|+.+. ++.||||+++... ....+.+.+|..++..+ +||||+++++++.+.+..++|
T Consensus 20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 99 (353)
T 2i0e_A 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 99 (353)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEE
Confidence 446678999999999999999874 7899999987542 23345688899999988 799999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccc
Q 002358 684 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 763 (931)
Q Consensus 684 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~ 763 (931)
|||+++|+|.+++.. ...+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 100 ~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 100 MEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 999999999999974 3568999999999999999999998 8999999999999999999999999999986432
Q ss_pred cccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccccc
Q 002358 764 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 843 (931)
Q Consensus 764 ~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~ 843 (931)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .+.+. +..+.. .
T Consensus 174 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~---~~~~~----i~~~~~------~ 239 (353)
T 2i0e_A 174 DGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED---ELFQS----IMEHNV------A 239 (353)
T ss_dssp TTC-CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHH----HHHCCC------C
T ss_pred CCc-ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH---HHHHH----HHhCCC------C
Confidence 222 233456999999999999999999999999999999999999999743321 11111 111111 0
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 002358 844 LIGNVKIESIWRIAEVAIQCVEQRGFSRPK-----MQEIVL 879 (931)
Q Consensus 844 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs-----~~evl~ 879 (931)
++......+.+++.+||+.+|++||+ ++||++
T Consensus 240 ----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 240 ----YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp ----CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred ----CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 11122236789999999999999995 466653
No 134
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=344.16 Aligned_cols=259 Identities=23% Similarity=0.390 Sum_probs=200.5
Q ss_pred HHHHhhccccCccCcEEEEEEEEC-CCc----EEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEE
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK-DGK----EVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 681 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~-~g~----~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~ 681 (931)
...|++.+.||+|+||.||+|.+. +++ .||+|.+.... ....+.+.+|+.++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 345677899999999999999975 344 35777775432 345578999999999999999999999998765 78
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccc
Q 002358 682 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 761 (931)
Q Consensus 682 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~ 761 (931)
+|+|++++|+|.+++... ...+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 93 ~v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred EEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence 999999999999999753 4568999999999999999999998 89999999999999999999999999999876
Q ss_pred cccccc-cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeec
Q 002358 762 EEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISI 839 (931)
Q Consensus 762 ~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i 839 (931)
...... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||........ ... +..+....
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~---~~~----~~~~~~~~- 239 (327)
T 3lzb_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI---SSI----LEKGERLP- 239 (327)
T ss_dssp ------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---HHH----HHTTCCCC-
T ss_pred cCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH---HHH----HHcCCCCC-
Confidence 433221 2223346789999999999999999999999999999999 9999974433221 111 11111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 840 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 840 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
.+......+.+++.+||+.+|++||+++|+++.|+++....
T Consensus 240 --------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 240 --------QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp --------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred --------CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 11122336889999999999999999999999999887543
No 135
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.4e-37 Score=368.85 Aligned_cols=252 Identities=25% Similarity=0.425 Sum_probs=202.3
Q ss_pred ccCccCcEEEEEEEEC---CCcEEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEecCCCC
Q 002358 616 KIGKGSFGSVYYGKMK---DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGT 691 (931)
Q Consensus 616 ~LG~G~fG~Vy~a~~~---~g~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~gs 691 (931)
.||+|+||.||+|.++ ++..||||+++... ....++|.+|+++|++++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999875 46689999997653 3356789999999999999999999999976 56899999999999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccccc--c
Q 002358 692 LRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI--S 769 (931)
Q Consensus 692 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~~~--~ 769 (931)
|.+++... ...+++..++.++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++......... .
T Consensus 422 L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 496 (613)
T 2ozo_A 422 LHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 496 (613)
T ss_dssp HHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---------
T ss_pred HHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeec
Confidence 99999743 4568999999999999999999998 899999999999999999999999999998764332211 2
Q ss_pred cccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccCCC
Q 002358 770 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 848 (931)
Q Consensus 770 ~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~ 848 (931)
....+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .+.+ .+..+.... .
T Consensus 497 ~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~---~~~~----~i~~~~~~~---------~ 560 (613)
T 2ozo_A 497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVMA----FIEQGKRME---------C 560 (613)
T ss_dssp -----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH---HHHH----HHHTTCCCC---------C
T ss_pred cCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH---HHHH----HHHcCCCCC---------C
Confidence 22335689999999998899999999999999999998 99999743322 2222 222222111 1
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 849 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 849 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
+...+..+.+++.+||+.+|++||++++|++.|+++.....
T Consensus 561 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 561 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 22233478899999999999999999999999998876543
No 136
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=5e-37 Score=344.34 Aligned_cols=251 Identities=24% Similarity=0.328 Sum_probs=200.1
Q ss_pred HHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhc-CCCCCcceeEEEecCCeEEEEEE
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
...|++.+.||+|+||.||+|..+ +|+.||||++.... ....+|++++.++ +||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 456778899999999999999987 68899999986542 2345788888888 79999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCC----CceEEecccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN----MRAKVSDFGLSRQA 761 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~----~~vkL~DFGla~~~ 761 (931)
|+++|+|.+.+.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||+.++ +.+||+|||+++..
T Consensus 97 ~~~gg~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 97 LMKGGELLDKILR---QKFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCCSCBHHHHHHT---CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred CCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 9999999999873 4568999999999999999999998 899999999999998433 35999999999876
Q ss_pred cccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccc
Q 002358 762 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 841 (931)
Q Consensus 762 ~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d 841 (931)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..........+.. .+..+...
T Consensus 171 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~----~i~~~~~~---- 241 (342)
T 2qr7_A 171 RAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILA----RIGSGKFS---- 241 (342)
T ss_dssp BCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHH----HHHHCCCC----
T ss_pred cCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHH----HHccCCcc----
Confidence 44322 2234468999999999988889999999999999999999999997433222222222 22222221
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 842 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 842 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
+...........+.+++.+||+.||++||+++|+++
T Consensus 242 --~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 242 --LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp --CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred --cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111122346789999999999999999999875
No 137
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.3e-37 Score=343.03 Aligned_cols=256 Identities=25% Similarity=0.295 Sum_probs=197.5
Q ss_pred HHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCc-----cchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEE
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS-----CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 681 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~-----~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~ 681 (931)
...|++.+.||+|+||.||+|..+ +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 466778999999999999999886 6889999998643 2334578999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCC-------------------------------------CCCCCCHHHHHHHHHHHHHHhHHh
Q 002358 682 LVYEYMHNGTLRDRLHGSV-------------------------------------NQKPLDWLTRLQIAHDAAKGLEYL 724 (931)
Q Consensus 682 lV~E~~~~gsL~~~L~~~~-------------------------------------~~~~l~~~~~~~i~~qia~aL~yL 724 (931)
+||||+++|+|.+++.... ....+++..+..++.|+++||+||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999985211 011235677888999999999999
Q ss_pred hhcCCCCeEecCCCCCCccccCCC--ceEEeccccccccccccc---ccccccccCCCccCCCccCC--CCCCccchhHH
Q 002358 725 HTGCNPGIIHRDVKSSNILLDINM--RAKVSDFGLSRQAEEDLT---HISSVARGTVGYLDPEYYGN--QQLTEKSDVYS 797 (931)
Q Consensus 725 H~~~~~~ivH~DIkp~NILld~~~--~vkL~DFGla~~~~~~~~---~~~~~~~gt~~y~APE~l~~--~~~s~ksDVwS 797 (931)
|+ .+|+||||||+|||++.++ .+||+|||+++....... .......||+.|+|||.+.+ ..++.++||||
T Consensus 185 H~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diws 261 (345)
T 3hko_A 185 HN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261 (345)
T ss_dssp HH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHH
T ss_pred HH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHH
Confidence 98 8999999999999998776 899999999986543221 12234568999999999865 67899999999
Q ss_pred HHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHH
Q 002358 798 FGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEI 877 (931)
Q Consensus 798 lGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev 877 (931)
||+++|||++|+.||......+ ........... ...+.. ......+.+++.+||+.+|++||++.|+
T Consensus 262 lG~il~el~~g~~pf~~~~~~~------~~~~~~~~~~~--~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 262 AGVLLHLLLMGAVPFPGVNDAD------TISQVLNKKLC--FENPNY-----NVLSPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp HHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCC--TTSGGG-----GGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HHHHHHHHHHCCCCCCCCChHH------HHHHHHhcccc--cCCccc-----ccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 9999999999999997433221 11111111110 001110 1122367899999999999999999999
Q ss_pred HH
Q 002358 878 VL 879 (931)
Q Consensus 878 l~ 879 (931)
++
T Consensus 329 l~ 330 (345)
T 3hko_A 329 LQ 330 (345)
T ss_dssp HH
T ss_pred hc
Confidence 76
No 138
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.5e-37 Score=339.46 Aligned_cols=263 Identities=27% Similarity=0.433 Sum_probs=210.0
Q ss_pred HHHHhhccccCccCcEEEEEEEEC------CCcEEEEEEccCccc-hhhhhHHHHHHHHHhc-CCCCCcceeEEEecCC-
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH- 678 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~------~g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~- 678 (931)
...|++.+.||+|+||.||+|.+. +++.||||+++.... ...+.+.+|+++++++ +||||+++++++...+
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 456777899999999999999852 468999999976543 3456799999999999 7999999999987654
Q ss_pred eEEEEEEecCCCCHHHHhccCCC-------------CCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCcccc
Q 002358 679 QRILVYEYMHNGTLRDRLHGSVN-------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD 745 (931)
Q Consensus 679 ~~~lV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld 745 (931)
..++||||+++|+|.+++..... ...+++..++.++.|+++||+|||+ .+|+||||||+||+++
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~ 182 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLS 182 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEC
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEEC
Confidence 58999999999999999985432 2238899999999999999999998 8999999999999999
Q ss_pred CCCceEEeccccccccccccc-ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhH
Q 002358 746 INMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNI 823 (931)
Q Consensus 746 ~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l 823 (931)
.++.+||+|||+++....... .......||+.|+|||.+.+..++.++||||||+++|||++ |..||....... ..
T Consensus 183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~ 260 (316)
T 2xir_A 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EF 260 (316)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH--HH
T ss_pred CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH--HH
Confidence 999999999999987544322 22233457889999999988899999999999999999998 999997433221 11
Q ss_pred HHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 824 VHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
.. .+..+.... .... ....+.+++.+||+.+|++||+++||++.|++++...
T Consensus 261 ~~----~~~~~~~~~-----~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 261 CR----RLKEGTRMR-----APDY----TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp HH----HHHHTCCCC-----CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HH----HhccCccCC-----CCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 11 111121111 1111 2236789999999999999999999999999987654
No 139
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.1e-37 Score=343.26 Aligned_cols=269 Identities=25% Similarity=0.411 Sum_probs=197.2
Q ss_pred HHHhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHH--HHhcCCCCCcceeEEEec-----CCeEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVAL--LSRIHHRNLVPLIGYCEE-----EHQRI 681 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~i--l~~l~HpnIv~l~g~~~~-----~~~~~ 681 (931)
..+++.+.||+|+||.||+|++ +++.||||++... ....+..|.++ +..++||||+++++.+.. ....+
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 3466789999999999999987 4899999998643 23344455555 445899999999985532 33678
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCC---------CeEecCCCCCCccccCCCceEE
Q 002358 682 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP---------GIIHRDVKSSNILLDINMRAKV 752 (931)
Q Consensus 682 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~---------~ivH~DIkp~NILld~~~~vkL 752 (931)
+||||+++|+|.+++.. ...++..+..++.|+++||+|||+ . +|+||||||+|||++.++.+||
T Consensus 89 lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSL----HTSDWVSSCRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred EEEecCCCCcHHHHHhh----cccchhHHHHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEEcCCCcEEE
Confidence 99999999999999974 345889999999999999999998 6 9999999999999999999999
Q ss_pred ecccccccccccc-------cccccccccCCCccCCCccCC-------CCCCccchhHHHHHHHHHHHhCCCCCCccCcc
Q 002358 753 SDFGLSRQAEEDL-------THISSVARGTVGYLDPEYYGN-------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFG 818 (931)
Q Consensus 753 ~DFGla~~~~~~~-------~~~~~~~~gt~~y~APE~l~~-------~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~ 818 (931)
+|||+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||......
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 9999998754321 111223458999999999977 45677999999999999999997776422221
Q ss_pred ch-hhH----------HHHHHHhhhcCCeeecccccccCC--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 002358 819 AE-LNI----------VHWARSMIKKGDVISIVDPVLIGN--VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSI 885 (931)
Q Consensus 819 ~~-~~l----------~~~~~~~~~~~~~~~i~d~~l~~~--~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 885 (931)
.. ... ............. .+.+... ........+.+++.+||+.||++|||++|+++.|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQ----RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTSCC----CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hHHHHhhhcccCCCchHHHHHhhhccccc----CCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 11 000 0011111111111 1111111 12235567999999999999999999999999999998
Q ss_pred hhhcCCC
Q 002358 886 KIEKGGD 892 (931)
Q Consensus 886 ~~~~~~~ 892 (931)
.......
T Consensus 318 ~~~~~~~ 324 (336)
T 3g2f_A 318 MIWERNK 324 (336)
T ss_dssp HCCCC--
T ss_pred HHHHhcc
Confidence 7665443
No 140
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.8e-37 Score=332.06 Aligned_cols=247 Identities=27% Similarity=0.424 Sum_probs=180.9
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc---hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
.|++.+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 12 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 91 (278)
T 3cok_A 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLE 91 (278)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEe
Confidence 4667889999999999999975 789999999864322 223678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
|+++++|.+++... ...+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 92 MCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp CCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred cCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 99999999999742 3568999999999999999999998 899999999999999999999999999998654322
Q ss_pred cccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccccccc
Q 002358 766 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 845 (931)
Q Consensus 766 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 845 (931)
.. .....||+.|+|||.+.+..++.++||||||+++|||++|+.||......... ..... . +...
T Consensus 167 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------~~~~~-~------~~~~- 231 (278)
T 3cok_A 167 EK-HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL------NKVVL-A------DYEM- 231 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CCS-S------CCCC-
T ss_pred Cc-ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH------HHHhh-c------ccCC-
Confidence 21 22345899999999999989999999999999999999999999744322110 00000 0 0111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 846 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 846 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
+......+.+++.+||+.||++||+++|+++
T Consensus 232 ---~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 232 ---PSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ---CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---ccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 1122336789999999999999999999875
No 141
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.2e-37 Score=332.59 Aligned_cols=243 Identities=24% Similarity=0.369 Sum_probs=178.2
Q ss_pred HhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc---chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEe
Q 002358 611 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 611 ~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 15 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 94 (275)
T 2eue_A 15 YQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 94 (275)
T ss_dssp BCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred eEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehh
Confidence 566799999999999999875 68999999987543 22346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccc
Q 002358 687 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 766 (931)
Q Consensus 687 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~ 766 (931)
+ +++|.+.+.. ...+++..+..++.|+++||+|||+ .+++||||||+||++++++.+||+|||++........
T Consensus 95 ~-~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 167 (275)
T 2eue_A 95 A-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp C-CEEHHHHHHT---SSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred c-CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecccceeccCccc
Confidence 9 7788888763 4568999999999999999999998 8999999999999999999999999999976543322
Q ss_pred ccccccccCCCccCCCccCCCCC-CccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccccccc
Q 002358 767 HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 845 (931)
Q Consensus 767 ~~~~~~~gt~~y~APE~l~~~~~-s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 845 (931)
.....||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||....... ... .+..+.. .+.
T Consensus 168 --~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~----~~~~~~~------~~~ 232 (275)
T 2eue_A 168 --LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV---LFK----NISNGVY------TLP 232 (275)
T ss_dssp ---------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH----HHHHTCC------CCC
T ss_pred --ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH---HHH----HHHhCCC------CCC
Confidence 223458999999999988765 789999999999999999999997433211 111 1111111 011
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 846 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 846 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.. ....+.+++.+||+.||++|||++|+++
T Consensus 233 ~~----~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 233 KF----LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp TT----SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cc----CCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 11 2235789999999999999999999874
No 142
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=6e-37 Score=346.36 Aligned_cols=252 Identities=24% Similarity=0.297 Sum_probs=192.0
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEec
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 687 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 687 (931)
..|++.+.||+|+||.||+++.+ +++.||||++.... ...+.+.+|+.++++++||||+++++++.+....++||||+
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 98 (361)
T 3uc3_A 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA 98 (361)
T ss_dssp TTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence 35677899999999999999987 78999999987543 23356889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCc--eEEecccccccccccc
Q 002358 688 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR--AKVSDFGLSRQAEEDL 765 (931)
Q Consensus 688 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~--vkL~DFGla~~~~~~~ 765 (931)
++|+|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++. +||+|||+++......
T Consensus 99 ~~~~L~~~l~~---~~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~ 172 (361)
T 3uc3_A 99 SGGELYERICN---AGRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 172 (361)
T ss_dssp CSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred CCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC
Confidence 99999999873 4568999999999999999999998 89999999999999987765 9999999987532221
Q ss_pred cccccccccCCCccCCCccCCCCCCcc-chhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccc
Q 002358 766 THISSVARGTVGYLDPEYYGNQQLTEK-SDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 844 (931)
Q Consensus 766 ~~~~~~~~gt~~y~APE~l~~~~~s~k-sDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 844 (931)
......||+.|+|||++.+..++.+ +|||||||++|||++|+.||......... ......... ... ...+
T Consensus 173 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~--~~~~~~~~~-~~~-~~~~--- 243 (361)
T 3uc3_A 173 --QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY--RKTIQRILS-VKY-SIPD--- 243 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCH--HHHHHHHHT-TCC-CCCT---
T ss_pred --CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHH--HHHHHHHhc-CCC-CCCC---
Confidence 1233458999999999988777665 89999999999999999999744332211 111111111 111 0000
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002358 845 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 880 (931)
Q Consensus 845 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 880 (931)
.......+.+++.+||+.+|++|||++|+++.
T Consensus 244 ----~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 244 ----DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ----TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ----cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 00112367899999999999999999999853
No 143
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=6e-37 Score=332.83 Aligned_cols=245 Identities=26% Similarity=0.412 Sum_probs=198.1
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc---hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
.|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++.+....++|||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 89 (279)
T 3fdn_A 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILE 89 (279)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEe
Confidence 4567899999999999999877 577999999865321 224578899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
|+++|+|.+.+.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~~~~~~l~~~l~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 90 YAPLGTVYRELQK---LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp CCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred cCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence 9999999999874 3568999999999999999999998 899999999999999999999999999986543322
Q ss_pred cccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccccccc
Q 002358 766 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 845 (931)
Q Consensus 766 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 845 (931)
.....|++.|+|||.+.+..++.++||||||+++|||++|+.||........ .. .+.....
T Consensus 164 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~----~~~~~~~--------- 224 (279)
T 3fdn_A 164 ---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YK----RISRVEF--------- 224 (279)
T ss_dssp -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HH----HHHHTCC---------
T ss_pred ---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH---HH----HHHhCCC---------
Confidence 2234589999999999999999999999999999999999999974332211 11 1111110
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002358 846 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 880 (931)
Q Consensus 846 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 880 (931)
..+......+.+++.+||+.+|++||+++|+++.
T Consensus 225 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 225 -TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp -CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred -CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1111122367899999999999999999999863
No 144
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.8e-37 Score=343.96 Aligned_cols=265 Identities=16% Similarity=0.196 Sum_probs=207.0
Q ss_pred HHHhhccccCccCcEEEEEEEECC---------CcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcc----------
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMKD---------GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVP---------- 669 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~~---------g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~---------- 669 (931)
..|++.+.||+|+||.||+|+... ++.||+|++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 356678999999999999999874 789999998643 46889999999999999887
Q ss_pred -----eeEEEec-CCeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCcc
Q 002358 670 -----LIGYCEE-EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNIL 743 (931)
Q Consensus 670 -----l~g~~~~-~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NIL 743 (931)
+++++.. ....++||||+ +++|.+++... ....+++..++.++.||++||+|||+ .+|+||||||+|||
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIl 191 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAENIF 191 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGGGEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEE
Confidence 6777765 67889999999 99999999853 23579999999999999999999998 89999999999999
Q ss_pred ccCCC--ceEEecccccccccccccc------cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCcc
Q 002358 744 LDINM--RAKVSDFGLSRQAEEDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVE 815 (931)
Q Consensus 744 ld~~~--~vkL~DFGla~~~~~~~~~------~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~ 815 (931)
++.++ .+||+|||+++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 8999999999876543221 113346899999999999999999999999999999999999999744
Q ss_pred CccchhhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 816 DFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 816 ~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
... ...+......... ....+.+..... ......+.+++.+||+.||++||+++||++.|+++.....
T Consensus 272 ~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 272 LPN-TEDIMKQKQKFVD--KPGPFVGPCGHW---IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp TTC-HHHHHHHHHHHHH--SCCCEECTTSCE---ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred CcC-HHHHHHHHHhccC--Chhhhhhhcccc---CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 322 1222222221111 111121111100 0112368899999999999999999999999999876654
No 145
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=4.1e-37 Score=339.91 Aligned_cols=264 Identities=26% Similarity=0.424 Sum_probs=199.8
Q ss_pred HHHHHHhhccccCccCcEEEEEEEEC----CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecCC-
Q 002358 606 LEEATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH- 678 (931)
Q Consensus 606 l~~~~~~~~~~LG~G~fG~Vy~a~~~----~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~- 678 (931)
+....|.+.+.||+|+||.||+|.+. .++.||+|+++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34456677899999999999999865 24589999987542 334567999999999999999999999997754
Q ss_pred ----eEEEEEEecCCCCHHHHhccCC---CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceE
Q 002358 679 ----QRILVYEYMHNGTLRDRLHGSV---NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAK 751 (931)
Q Consensus 679 ----~~~lV~E~~~~gsL~~~L~~~~---~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vk 751 (931)
..++||||+++|+|.+++.... ....+++..++.++.|+++||.|||+ .+|+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEE
Confidence 3499999999999999985322 34568999999999999999999998 8999999999999999999999
Q ss_pred Eeccccccccccccc-ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHH
Q 002358 752 VSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARS 829 (931)
Q Consensus 752 L~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~ 829 (931)
|+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |..||....... ....+
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~~~-- 262 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE---MYDYL-- 262 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHHH--
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH---HHHHH--
Confidence 999999987543322 12233457889999999999999999999999999999999 889987433221 11111
Q ss_pred hhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 830 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 830 ~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
..+.... . +......+.+++.+||+.+|++||+++|+++.|+++....
T Consensus 263 --~~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 263 --LHGHRLK-----Q----PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp --HTTCCCC-----C----BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --HcCCCCC-----C----CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 1111111 1 1122246889999999999999999999999999987644
No 146
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3.3e-37 Score=340.80 Aligned_cols=260 Identities=24% Similarity=0.369 Sum_probs=196.0
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc---hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCe----E
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ----R 680 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~----~ 680 (931)
..|++.+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|++++++++||||+++++++..... .
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 45677899999999999999974 789999999976432 234578999999999999999999999876543 4
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccc
Q 002358 681 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 760 (931)
Q Consensus 681 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~ 760 (931)
++||||+++|+|.+++.. ...+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 92 ~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred EEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 999999999999999974 3568999999999999999999998 8999999999999999999999999999987
Q ss_pred ccccccc--cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeee
Q 002358 761 AEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 838 (931)
Q Consensus 761 ~~~~~~~--~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 838 (931)
....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... .............
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~------~~~~~~~~~~~~~ 239 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS------VAYQHVREDPIPP 239 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHCCCCCH
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHhcCCCCCc
Confidence 5443221 2233458999999999999999999999999999999999999997433211 1111122111110
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHH-HHHHHHhhhhh
Q 002358 839 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQE-IVLAIQDSIKI 887 (931)
Q Consensus 839 i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~e-vl~~L~~~~~~ 887 (931)
..... .....+.+++.+||+.||++||+..+ +.+.+.+....
T Consensus 240 ---~~~~~----~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 282 (311)
T 3ork_A 240 ---SARHE----GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 282 (311)
T ss_dssp ---HHHST----TCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred ---ccccC----CCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence 00011 12236889999999999999996555 45556555443
No 147
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.6e-37 Score=345.61 Aligned_cols=265 Identities=30% Similarity=0.497 Sum_probs=208.6
Q ss_pred hhHHHHHHhhccccCccCcEEEEEEEEC-CCcE--EEEEEccCcc-chhhhhHHHHHHHHHhc-CCCCCcceeEEEecCC
Q 002358 604 PELEEATNNFCKKIGKGSFGSVYYGKMK-DGKE--VAVKIMADSC-SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 678 (931)
Q Consensus 604 ~~l~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~--vAvK~~~~~~-~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~ 678 (931)
+.+....+++.+.||+|+||.||+|++. +++. +|+|.++... ....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 20 p~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 99 (327)
T 1fvr_A 20 PVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 99 (327)
T ss_dssp SBCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT
T ss_pred ccccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC
Confidence 3444456778899999999999999876 4554 4999887532 33456799999999999 8999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCC-------------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCcccc
Q 002358 679 QRILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD 745 (931)
Q Consensus 679 ~~~lV~E~~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld 745 (931)
..++||||+++|+|.+++.... ....+++..++.++.|+++||+|||+ .+|+||||||+|||++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~ 176 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVG 176 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEc
Confidence 9999999999999999997532 23478999999999999999999998 8999999999999999
Q ss_pred CCCceEEecccccccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHH
Q 002358 746 INMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIV 824 (931)
Q Consensus 746 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~ 824 (931)
.++.+||+|||+++...... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ...
T Consensus 177 ~~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~---~~~ 251 (327)
T 1fvr_A 177 ENYVAKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---ELY 251 (327)
T ss_dssp GGGCEEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHH
T ss_pred CCCeEEEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH---HHH
Confidence 99999999999987533221 1223346889999999988889999999999999999998 99999743321 111
Q ss_pred HHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 825 HWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 825 ~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
..+..+.. .. .+......+.+++.+||+.+|++||+++|+++.|+++.....
T Consensus 252 ----~~~~~~~~-----~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 252 ----EKLPQGYR-----LE----KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp ----HHGGGTCC-----CC----CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred ----HHhhcCCC-----CC----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 11221111 01 111223468899999999999999999999999999887553
No 148
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=5.8e-37 Score=335.24 Aligned_cols=258 Identities=26% Similarity=0.425 Sum_probs=204.9
Q ss_pred HHHhhcc-ccCccCcEEEEEEEEC---CCcEEEEEEccCccc--hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEE
Q 002358 609 ATNNFCK-KIGKGSFGSVYYGKMK---DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 682 (931)
Q Consensus 609 ~~~~~~~-~LG~G~fG~Vy~a~~~---~g~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~l 682 (931)
..+.+.+ .||+|+||.||+|.+. .++.||||+++.... ...+++.+|++++++++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 3455556 8999999999999653 468899999875432 2357799999999999999999999999 5667899
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccc
Q 002358 683 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 762 (931)
Q Consensus 683 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~ 762 (931)
||||+++++|.+++.. ...+++..++.++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++....
T Consensus 95 v~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEeCCCCCHHHHHHh---CcCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 9999999999999984 3568999999999999999999998 899999999999999999999999999998764
Q ss_pred cccccc--ccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeec
Q 002358 763 EDLTHI--SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISI 839 (931)
Q Consensus 763 ~~~~~~--~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i 839 (931)
...... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .... .+..+....
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~----~~~~~~~~~- 240 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---EVTA----MLEKGERMG- 240 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHH----HHHTTCCCC-
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH---HHHH----HHHcCCCCC-
Confidence 433221 222346788999999988889999999999999999999 99999743321 1222 222222111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 840 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 840 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
.+......+.+++.+||+.||++||+++|+++.|+++.....
T Consensus 241 --------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 282 (291)
T 1xbb_A 241 --------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 282 (291)
T ss_dssp --------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred --------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 112223468899999999999999999999999999876654
No 149
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.1e-36 Score=327.39 Aligned_cols=251 Identities=24% Similarity=0.357 Sum_probs=203.2
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEe
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
..|++.+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 56778899999999999999987 68999999986433 33457789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccc
Q 002358 687 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 766 (931)
Q Consensus 687 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~ 766 (931)
+++++|.+++. ....+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++........
T Consensus 87 ~~~~~L~~~l~---~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 87 CSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp CTTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred cCCCcHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 99999999987 34578999999999999999999998 8999999999999999999999999999976543221
Q ss_pred -ccccccccCCCccCCCccCCCCC-CccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccc
Q 002358 767 -HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 844 (931)
Q Consensus 767 -~~~~~~~gt~~y~APE~l~~~~~-s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 844 (931)
.......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||...... ......|... ... .. .
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~----~~~---~~--~ 230 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS-CQEYSDWKEK----KTY---LN--P 230 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT-SHHHHHHHTT----CTT---ST--T
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH-HHHHHHhhhc----ccc---cC--c
Confidence 12234568999999999987765 77999999999999999999999743322 1222222211 000 00 0
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 845 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 845 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.......+.+++.+||+.+|++|||++|+++
T Consensus 231 ----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 231 ----WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp ----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 0112236789999999999999999999875
No 150
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.1e-37 Score=360.15 Aligned_cols=248 Identities=24% Similarity=0.344 Sum_probs=193.0
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCc---cchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 684 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~ 684 (931)
..|++.+.||+|+||.||+|... +|+.||||+++.. .......+.+|++++++++||||+++++++...+..++||
T Consensus 148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 227 (446)
T 4ejn_A 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 227 (446)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence 34677899999999999999876 6899999998753 2234466888999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccc
Q 002358 685 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 764 (931)
Q Consensus 685 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~ 764 (931)
||+++|+|.+++.. ...+++..+..++.||++||+|||+ ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus 228 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 228 EYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp CCCSSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred eeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999999874 4568999999999999999999995 278999999999999999999999999999864333
Q ss_pred ccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccc
Q 002358 765 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 844 (931)
Q Consensus 765 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 844 (931)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .+... +..+.. .+
T Consensus 303 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~----i~~~~~------~~ 368 (446)
T 4ejn_A 303 GAT-MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFEL----ILMEEI------RF 368 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHH----HHHCCC------CC
T ss_pred Ccc-cccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH---HHHHH----HHhCCC------CC
Confidence 222 23456999999999999999999999999999999999999999743322 11111 111111 11
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 002358 845 IGNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVL 879 (931)
Q Consensus 845 ~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~ 879 (931)
... ....+.+++.+||+.||++|| +++|+++
T Consensus 369 p~~----~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 369 PRT----LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CTT----SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred Ccc----CCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 111 223678999999999999999 9999875
No 151
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=6e-37 Score=349.99 Aligned_cols=249 Identities=22% Similarity=0.324 Sum_probs=194.8
Q ss_pred HHhhccccCccCcEEEEEEEECCCcEEEEEEccCcc--chhhhhHHHHHHHHHhcC--CCCCcceeEEEecCCeEEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIH--HRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~--HpnIv~l~g~~~~~~~~~lV~E 685 (931)
.|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|+++|++++ ||||+++++++...+..++|||
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E 136 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe
Confidence 367789999999999999998889999999986532 334578999999999996 5999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
+.+++|.+++.. ...+++..+..++.||++||+|||+ .+|+||||||+|||++ ++.+||+|||+++......
T Consensus 137 -~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 137 -CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp -CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred -cCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 668999999984 3478888999999999999999998 8999999999999995 5889999999998765433
Q ss_pred cc-cccccccCCCccCCCccCC-----------CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhc
Q 002358 766 TH-ISSVARGTVGYLDPEYYGN-----------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 833 (931)
Q Consensus 766 ~~-~~~~~~gt~~y~APE~l~~-----------~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~ 833 (931)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... . ...+...+..
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~--~---~~~~~~~~~~ 283 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--Q---ISKLHAIIDP 283 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC--H---HHHHHHHHCT
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH--H---HHHHHHHhCc
Confidence 22 2334569999999999864 4688999999999999999999999963211 1 1111111211
Q ss_pred CCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002358 834 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 880 (931)
Q Consensus 834 ~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 880 (931)
. .....+......+.+++.+||+.||++||+++|+++.
T Consensus 284 ~---------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 284 N---------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp T---------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred c---------ccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1 1111111112367899999999999999999999853
No 152
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.1e-36 Score=332.89 Aligned_cols=250 Identities=26% Similarity=0.409 Sum_probs=201.6
Q ss_pred HHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEe
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
...|.+.+.||+|+||.||+|+.. +|+.||+|+++.......+.+.+|++++++++||||+++++++.+....++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 467788999999999999999986 6899999999865544556789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccc---cCCCceEEecccccccccc
Q 002358 687 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEE 763 (931)
Q Consensus 687 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILl---d~~~~vkL~DFGla~~~~~ 763 (931)
+++++|.+.+.. ...+++..+..++.|++.||+|||+ .+++||||||+||++ +.++.+||+|||+++....
T Consensus 88 ~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 88 VSGGELFDRILE---RGVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp CCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred CCCccHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 999999998864 3468899999999999999999998 899999999999999 7889999999999876433
Q ss_pred cccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccccc
Q 002358 764 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 843 (931)
Q Consensus 764 ~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~ 843 (931)
.. .....|++.|+|||.+.+..++.++||||||+++|||++|+.||...... .+.. .+..+... . ...
T Consensus 162 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~----~i~~~~~~-~-~~~ 229 (304)
T 2jam_A 162 GI---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES---KLFE----KIKEGYYE-F-ESP 229 (304)
T ss_dssp BT---THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHH----HHHHCCCC-C-CTT
T ss_pred Cc---cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---HHHH----HHHcCCCC-C-Ccc
Confidence 21 22345899999999999999999999999999999999999999743221 1111 12122110 0 111
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 844 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 844 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.. ......+.+++.+||+.||++||+++|+++
T Consensus 230 ~~----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 230 FW----DDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TT----TTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cc----ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11 122346889999999999999999999975
No 153
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.8e-36 Score=330.66 Aligned_cols=252 Identities=24% Similarity=0.384 Sum_probs=197.0
Q ss_pred HHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
...|.+.+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 356788999999999999999986 68899999986543 2345789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccc---cCCCceEEecccccccc
Q 002358 686 YMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQA 761 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILl---d~~~~vkL~DFGla~~~ 761 (931)
|+++|+|.+.+.... ....+++..+..++.|+++||+|||+ .+|+||||||+||++ +.++.+||+|||++...
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 999999999885421 24568999999999999999999998 899999999999999 45678999999999865
Q ss_pred cccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccc
Q 002358 762 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 841 (931)
Q Consensus 762 ~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d 841 (931)
..... .....||+.|+|||.+. ..++.++||||||+++|||++|+.||....... ..... ......... .
T Consensus 178 ~~~~~--~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~---~~~~~---~~~~~~~~~-~ 247 (285)
T 3is5_A 178 KSDEH--STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE---VQQKA---TYKEPNYAV-E 247 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHH---HHCCCCCCC--
T ss_pred CCccc--CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH---HHhhh---ccCCccccc-c
Confidence 44322 23345899999999986 468899999999999999999999997443221 11111 111100000 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 842 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 842 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.... ...+.+++.+||+.||++|||++|+++
T Consensus 248 ---~~~~----~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 248 ---CRPL----TPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ----CCC----CHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ---cCcC----CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0011 236779999999999999999999874
No 154
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.9e-36 Score=340.59 Aligned_cols=246 Identities=29% Similarity=0.413 Sum_probs=198.6
Q ss_pred HHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc---chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEE
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 683 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV 683 (931)
...++..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++..++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 355677889999999999999874 78999999986532 23346789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccc
Q 002358 684 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 763 (931)
Q Consensus 684 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~ 763 (931)
|||+. |+|.+.+.. ....+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 133 ~e~~~-g~l~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EECCS-EEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EecCC-CCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 99997 688887753 24568999999999999999999998 8999999999999999999999999999976543
Q ss_pred cccccccccccCCCccCCCccC---CCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecc
Q 002358 764 DLTHISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 840 (931)
Q Consensus 764 ~~~~~~~~~~gt~~y~APE~l~---~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~ 840 (931)
. ....||+.|+|||++. ...++.++|||||||++|||++|+.||...... .......... .....
T Consensus 207 ~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~------~~~~~~~~~~-~~~~~ 274 (348)
T 1u5q_A 207 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIAQNE-SPALQ 274 (348)
T ss_dssp B-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHSC-CCCCC
T ss_pred C-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHHhcC-CCCCC
Confidence 2 2346899999999983 567899999999999999999999999633221 1111122211 11111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 841 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 841 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
... ....+.+++.+||+.+|++|||++|+++
T Consensus 275 ----~~~----~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 275 ----SGH----WSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp ----CTT----SCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ----CCC----CCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 111 2236789999999999999999999875
No 155
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.4e-36 Score=328.49 Aligned_cols=257 Identities=25% Similarity=0.313 Sum_probs=204.0
Q ss_pred HHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccch------hhhhHHHHHHHHHhcCCCCCcceeEEEecCCeE
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 680 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~------~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~ 680 (931)
...|++.+.||+|+||.||+|... +++.||+|+++..... ..+.+.+|++++++++||||+++++++.+....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 456788999999999999999987 6899999998654221 356799999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCC----ceEEeccc
Q 002358 681 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFG 756 (931)
Q Consensus 681 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~----~vkL~DFG 756 (931)
++||||+++++|.+++.. ...+++..+..++.|+++||+|||+ .+++||||||+||+++.++ .+||+|||
T Consensus 84 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 999999999999999974 4568999999999999999999998 8999999999999998877 79999999
Q ss_pred ccccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCe
Q 002358 757 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 836 (931)
Q Consensus 757 la~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 836 (931)
++........ .....|++.|+|||.+.+..++.++||||||+++|||++|+.||....... ... .+.....
T Consensus 158 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~----~~~~~~~ 228 (283)
T 3bhy_A 158 IAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE---TLT----NISAVNY 228 (283)
T ss_dssp TCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHH----HHHTTCC
T ss_pred cceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH---HHH----HhHhccc
Confidence 9986543322 223458999999999999999999999999999999999999997433211 111 1111111
Q ss_pred eecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH--HHHhhh
Q 002358 837 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL--AIQDSI 885 (931)
Q Consensus 837 ~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~--~L~~~~ 885 (931)
. .++..... ....+.+++.+||+.+|++||+++|+++ .++++.
T Consensus 229 ~--~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 229 D--FDEEYFSN----TSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp C--CCHHHHTT----CCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred C--Ccchhccc----CCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 0 01111111 1236789999999999999999999986 455543
No 156
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=340.89 Aligned_cols=242 Identities=23% Similarity=0.323 Sum_probs=200.1
Q ss_pred HHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc--------hhhhhHHHHHHHHHhcCCCCCcceeEEEecCC
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH 678 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~--------~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~ 678 (931)
...|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 456778899999999999999875 688999999875421 13456788999999999999999999999999
Q ss_pred eEEEEEEecCCC-CHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccc
Q 002358 679 QRILVYEYMHNG-TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGL 757 (931)
Q Consensus 679 ~~~lV~E~~~~g-sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGl 757 (931)
..++||||+.+| +|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDR---HPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHT---CCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEEEeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeeccc
Confidence 999999999777 99999973 4569999999999999999999998 8999999999999999999999999999
Q ss_pred cccccccccccccccccCCCccCCCccCCCCC-CccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCe
Q 002358 758 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 836 (931)
Q Consensus 758 a~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~-s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 836 (931)
++....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... ... ..
T Consensus 177 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------------~~~-~~- 240 (335)
T 3dls_A 177 AAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------------TVE-AA- 240 (335)
T ss_dssp CEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------------GTT-TC-
T ss_pred ceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------------HHh-hc-
Confidence 987654322 223458999999999988776 7899999999999999999999963111 000 00
Q ss_pred eecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002358 837 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 880 (931)
Q Consensus 837 ~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 880 (931)
..+ +......+.+++.+||+.+|++|||++|+++.
T Consensus 241 ---~~~------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 241 ---IHP------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ---CCC------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ---cCC------CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 11112367899999999999999999999864
No 157
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.7e-37 Score=336.91 Aligned_cols=253 Identities=30% Similarity=0.471 Sum_probs=198.8
Q ss_pred HHHhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecC-CeEEEEEEec
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-HQRILVYEYM 687 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~-~~~~lV~E~~ 687 (931)
..+++.+.||+|+||.||+|+++ |+.||||+++... ..+.+.+|++++++++||||+++++++.+. +..++||||+
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 21 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 45677899999999999999986 8999999987543 456789999999999999999999987554 4789999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccccc
Q 002358 688 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 767 (931)
Q Consensus 688 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~~ 767 (931)
++|+|.+++... ....+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~L~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 98 AKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp TTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCHHHHHHhc-ccccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 999999998742 12237888999999999999999998 899999999999999999999999999987654322
Q ss_pred cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccC
Q 002358 768 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 846 (931)
Q Consensus 768 ~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 846 (931)
....+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ... .+..+.. ...
T Consensus 172 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~~----~~~~~~~-----~~~-- 235 (278)
T 1byg_A 172 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVP----RVEKGYK-----MDA-- 235 (278)
T ss_dssp ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG---HHH----HHTTTCC-----CCC--
T ss_pred --cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH----HHhcCCC-----CCC--
Confidence 22347889999999988899999999999999999998 999997433221 111 1111111 111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 847 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 847 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
+......+.+++.+||+.+|++||+++|+++.|+++...+
T Consensus 236 --~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 236 --PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp --CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 1122346889999999999999999999999999986544
No 158
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=330.11 Aligned_cols=248 Identities=24% Similarity=0.366 Sum_probs=196.6
Q ss_pred ccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEecCCCCH
Q 002358 614 CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGTL 692 (931)
Q Consensus 614 ~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~gsL 692 (931)
...||+|+||.||+|... +++.||+|++........+.+.+|+.+++.++||||+++++++...+..++||||+++++|
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 106 (295)
T 2clq_A 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL 106 (295)
T ss_dssp BCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEH
T ss_pred cEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCH
Confidence 358999999999999975 6889999999776555667899999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccC-CCceEEecccccccccccccccccc
Q 002358 693 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI-NMRAKVSDFGLSRQAEEDLTHISSV 771 (931)
Q Consensus 693 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~-~~~vkL~DFGla~~~~~~~~~~~~~ 771 (931)
.+++........+++..+..++.|+++||+|||+ .+++||||||+||+++. ++.+||+|||++........ ....
T Consensus 107 ~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~-~~~~ 182 (295)
T 2clq_A 107 SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-CTET 182 (295)
T ss_dssp HHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CC
T ss_pred HHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-cccc
Confidence 9999865445567788999999999999999998 89999999999999987 89999999999986543222 1233
Q ss_pred cccCCCccCCCccCCC--CCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccCCCC
Q 002358 772 ARGTVGYLDPEYYGNQ--QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVK 849 (931)
Q Consensus 772 ~~gt~~y~APE~l~~~--~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 849 (931)
..|++.|+|||.+.+. .++.++||||||+++|||++|+.||........ .... .... . ..+.+ +
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~---~~~~-~-----~~~~~----~ 248 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA-AMFK---VGMF-K-----VHPEI----P 248 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH-HHHH---HHHH-C-----CCCCC----C
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH-HHHh---hccc-c-----ccccc----c
Confidence 4589999999998664 378999999999999999999999963222111 1111 0000 0 01111 1
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 850 IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 850 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
......+.+++.+||+.+|++||+++|+++
T Consensus 249 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 249 ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 122336789999999999999999999874
No 159
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=7.7e-37 Score=369.79 Aligned_cols=249 Identities=27% Similarity=0.467 Sum_probs=199.4
Q ss_pred cccCccCcEEEEEEEEC---CCcEEEEEEccCccc--hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEecCC
Q 002358 615 KKIGKGSFGSVYYGKMK---DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 689 (931)
Q Consensus 615 ~~LG~G~fG~Vy~a~~~---~g~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 689 (931)
+.||+|+||.||+|.+. .++.||||+++.... ...+++.+|+++|++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 57999999999999764 467899999976432 335789999999999999999999999965 458899999999
Q ss_pred CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccc--c
Q 002358 690 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT--H 767 (931)
Q Consensus 690 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~--~ 767 (931)
|+|.+++.. ...+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....... .
T Consensus 454 g~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 527 (635)
T 4fl3_A 454 GPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527 (635)
T ss_dssp EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred CCHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence 999999974 4568999999999999999999998 8999999999999999999999999999987644322 1
Q ss_pred cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccC
Q 002358 768 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 846 (931)
Q Consensus 768 ~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 846 (931)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+. ..+..+....
T Consensus 528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~---~~~----~~i~~~~~~~-------- 592 (635)
T 4fl3_A 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---EVT----AMLEKGERMG-------- 592 (635)
T ss_dssp -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHH----HHHHTTCCCC--------
T ss_pred cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHH----HHHHcCCCCC--------
Confidence 2223346789999999999999999999999999999998 99999743321 111 2222222111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 002358 847 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 886 (931)
Q Consensus 847 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 886 (931)
.+......+.+++.+||+.||++||++++|++.|+++..
T Consensus 593 -~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 593 -CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp -CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 122233478899999999999999999999999998654
No 160
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2e-36 Score=334.76 Aligned_cols=257 Identities=24% Similarity=0.340 Sum_probs=195.5
Q ss_pred Hhh-ccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhc-CCCCCcceeEEEecCCeEEEEEEec
Q 002358 611 NNF-CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYM 687 (931)
Q Consensus 611 ~~~-~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~~~~lV~E~~ 687 (931)
|++ .+.||+|+||.||+|... +++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++||||+
T Consensus 14 y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 93 (316)
T 2ac3_A 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKM 93 (316)
T ss_dssp CEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcC
Confidence 444 368999999999999865 6899999999766555567899999999985 7999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCc---eEEeccccccccccc
Q 002358 688 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDFGLSRQAEED 764 (931)
Q Consensus 688 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~---vkL~DFGla~~~~~~ 764 (931)
++|+|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++. +||+|||++......
T Consensus 94 ~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 94 RGGSILSHIHK---RRHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp TTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred CCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 99999999974 3568999999999999999999998 89999999999999988776 999999998765322
Q ss_pred cc------ccccccccCCCccCCCccCC-----CCCCccchhHHHHHHHHHHHhCCCCCCccCccch--------hhHHH
Q 002358 765 LT------HISSVARGTVGYLDPEYYGN-----QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE--------LNIVH 825 (931)
Q Consensus 765 ~~------~~~~~~~gt~~y~APE~l~~-----~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~--------~~l~~ 825 (931)
.. .......||+.|+|||++.. ..++.++|||||||++|||++|+.||......+. .....
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 247 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence 11 11123458999999999865 5688999999999999999999999974432210 00001
Q ss_pred HHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 826 WARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 826 ~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.+...+..+... ...+ .... ....+.+++.+||+.||++|||++|+++
T Consensus 248 ~~~~~i~~~~~~-~~~~-~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 248 MLFESIQEGKYE-FPDK-DWAH----ISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHCCCC-CCHH-HHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHhccCcc-cCch-hccc----CCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 111122222110 0000 0011 1236889999999999999999999976
No 161
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-36 Score=354.91 Aligned_cols=245 Identities=24% Similarity=0.379 Sum_probs=202.1
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc---hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
.|.+.+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 17 ~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E 96 (476)
T 2y94_A 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVME 96 (476)
T ss_dssp TEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 4667899999999999999987 799999999865321 234578999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 97 ~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 97 YVSGGELFDYICK---NGRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp CCSSEEHHHHTTS---SSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 9999999999973 4569999999999999999999998 899999999999999999999999999998764432
Q ss_pred cccccccccCCCccCCCccCCCCC-CccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccc
Q 002358 766 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 844 (931)
Q Consensus 766 ~~~~~~~~gt~~y~APE~l~~~~~-s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 844 (931)
......||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... .+.. .+..+... .
T Consensus 171 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~---~~~~----~i~~~~~~------~ 235 (476)
T 2y94_A 171 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP---TLFK----KICDGIFY------T 235 (476)
T ss_dssp --CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH---HHHH----HHHTTCCC------C
T ss_pred --cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH---HHHH----HHhcCCcC------C
Confidence 2234569999999999988765 68999999999999999999999743322 1111 12222110 0
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 845 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 845 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
+......+.+++.+||+.||++|||++|+++
T Consensus 236 ----p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 236 ----PQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----CccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 1111236789999999999999999999986
No 162
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.6e-36 Score=332.16 Aligned_cols=246 Identities=24% Similarity=0.358 Sum_probs=201.9
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc---chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
.|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 95 (294)
T 2rku_A 16 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLE 95 (294)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEe
Confidence 4566799999999999999987 57899999986542 2345678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
|+++++|.+++.. ...+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 96 ~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 96 LCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp CCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred cCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 9999999998873 3568999999999999999999998 899999999999999999999999999998754322
Q ss_pred cccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccccccc
Q 002358 766 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 845 (931)
Q Consensus 766 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 845 (931)
.. .....|++.|+|||.+.+..++.++||||||+++|||++|+.||......+ .. . .+..+.. .+.
T Consensus 170 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~---~-~~~~~~~------~~~ 235 (294)
T 2rku_A 170 ER-KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---TY---L-RIKKNEY------SIP 235 (294)
T ss_dssp CC-BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HH---H-HHHTTCC------CCC
T ss_pred cc-cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HH---H-HHhhccC------CCc
Confidence 22 233458999999999999999999999999999999999999997433211 11 1 1111111 011
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 846 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 846 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.. ....+.+++.+||+.+|++||+++|+++
T Consensus 236 ~~----~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 236 KH----INPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp TT----SCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cc----cCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 11 2236789999999999999999999886
No 163
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.3e-37 Score=344.85 Aligned_cols=253 Identities=26% Similarity=0.357 Sum_probs=201.9
Q ss_pred HHHhhccccCccCcEEEEEEEE----CCCcEEEEEEccCcc----chhhhhHHHHHHHHHhc-CCCCCcceeEEEecCCe
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKM----KDGKEVAVKIMADSC----SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQ 679 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~----~~g~~vAvK~~~~~~----~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~~ 679 (931)
..|++.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++.....
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 4567789999999999999998 368999999987532 22345678899999999 69999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccc
Q 002358 680 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 759 (931)
Q Consensus 680 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~ 759 (931)
.++||||+++|+|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 134 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred EEEEeecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 9999999999999999974 3468999999999999999999998 899999999999999999999999999998
Q ss_pred cccccccccccccccCCCccCCCccCC--CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCee
Q 002358 760 QAEEDLTHISSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 837 (931)
Q Consensus 760 ~~~~~~~~~~~~~~gt~~y~APE~l~~--~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~ 837 (931)
..............||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... .......... .
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~--~~~~~~~~~~-~-- 282 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ--AEISRRILKS-E-- 282 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCH--HHHHHHHHHC-C--
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchH--HHHHHHHhcc-C--
Confidence 765444433444569999999999975 45789999999999999999999999744332211 1111111111 0
Q ss_pred ecccccccCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002358 838 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVLA 880 (931)
Q Consensus 838 ~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~ 880 (931)
+. .+......+.+++.+||+.||++|| +++|+++.
T Consensus 283 ----~~----~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 283 ----PP----YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp ----CC----CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred ----CC----CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 11 1122234678999999999999999 89998764
No 164
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=4.4e-37 Score=348.64 Aligned_cols=249 Identities=26% Similarity=0.356 Sum_probs=192.6
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc---hhhhhHHHHHHH-HHhcCCCCCcceeEEEecCCeEEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVAL-LSRIHHRNLVPLIGYCEEEHQRILV 683 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~i-l~~l~HpnIv~l~g~~~~~~~~~lV 683 (931)
..+++.+.||+|+||.||+|+.+ +++.||||+++.... ...+.+.+|..+ ++.++||||+++++++.+.+..++|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 45678899999999999999987 588999999975432 234556777776 5678999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccc
Q 002358 684 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 763 (931)
Q Consensus 684 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~ 763 (931)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 118 ~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 118 LDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 999999999999874 3568899999999999999999998 8999999999999999999999999999986432
Q ss_pred cccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccccc
Q 002358 764 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 843 (931)
Q Consensus 764 ~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~ 843 (931)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. ...+ .... +.. .
T Consensus 192 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~---~~~~---~i~~-~~~------~ 257 (373)
T 2r5t_A 192 HNS-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA---EMYD---NILN-KPL------Q 257 (373)
T ss_dssp CCC-CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH---HHHH---HHHH-SCC------C
T ss_pred CCC-ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH---HHHH---HHHh-ccc------C
Confidence 222 233456999999999999999999999999999999999999999743321 1111 1111 111 1
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002358 844 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAI 881 (931)
Q Consensus 844 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L 881 (931)
+... ....+.+++.+||+.||++||++.+.++.+
T Consensus 258 ~~~~----~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 258 LKPN----ITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp CCSS----SCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred CCCC----CCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 1111 223678999999999999999986444333
No 165
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=4.3e-37 Score=342.21 Aligned_cols=267 Identities=27% Similarity=0.455 Sum_probs=208.3
Q ss_pred hhHHHHHHhhccccCccCcEEEEEEEEC------CCcEEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEec
Q 002358 604 PELEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE 676 (931)
Q Consensus 604 ~~l~~~~~~~~~~LG~G~fG~Vy~a~~~------~g~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~ 676 (931)
.++....|++.+.||+|+||.||+|++. +++.||||++.... .....++.+|+.++++++||||+++++++..
T Consensus 25 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 104 (327)
T 2yfx_A 25 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 104 (327)
T ss_dssp CBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC
Confidence 3455567788999999999999999842 47789999997543 3455679999999999999999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHhccCC----CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccC---CCc
Q 002358 677 EHQRILVYEYMHNGTLRDRLHGSV----NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMR 749 (931)
Q Consensus 677 ~~~~~lV~E~~~~gsL~~~L~~~~----~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~---~~~ 749 (931)
....++||||+++|+|.+++.... ....+++..++.++.|+++||.|||+ .+|+||||||+|||++. +..
T Consensus 105 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~ 181 (327)
T 2yfx_A 105 SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRV 181 (327)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCC
T ss_pred CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcce
Confidence 999999999999999999998643 12458899999999999999999998 89999999999999984 446
Q ss_pred eEEeccccccccccccc-ccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHH
Q 002358 750 AKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWA 827 (931)
Q Consensus 750 vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~ 827 (931)
+||+|||+++....... .......|++.|+|||.+.+..++.++||||||+++|||++ |+.||..... ....+.
T Consensus 182 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---~~~~~~- 257 (327)
T 2yfx_A 182 AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---QEVLEF- 257 (327)
T ss_dssp EEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---HHHHHH-
T ss_pred EEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH---HHHHHH-
Confidence 99999999876433221 22233457889999999988889999999999999999998 9999974322 122222
Q ss_pred HHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 828 RSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 828 ~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
+..+.... . +......+.+++.+||+.+|++||+++||++.|+.+.....
T Consensus 258 ---~~~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~ 307 (327)
T 2yfx_A 258 ---VTSGGRMD-----P----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 307 (327)
T ss_dssp ---HHTTCCCC-----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred ---HhcCCCCC-----C----CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence 11121111 1 11222368899999999999999999999999998775443
No 166
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=6.2e-37 Score=341.65 Aligned_cols=263 Identities=23% Similarity=0.336 Sum_probs=197.4
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc--hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEe
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
.|++.+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 105 (331)
T 4aaa_A 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEF 105 (331)
T ss_dssp GEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEec
Confidence 4667899999999999999987 489999999865432 2346688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccc
Q 002358 687 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 766 (931)
Q Consensus 687 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~ 766 (931)
+++++|.+++. ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.......
T Consensus 106 ~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 106 VDHTILDDLEL---FPNGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp CSEEHHHHHHH---STTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred CCcchHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 99999998876 34568999999999999999999998 8999999999999999999999999999986544322
Q ss_pred ccccccccCCCccCCCccCCC-CCCccchhHHHHHHHHHHHhCCCCCCccCccchhh-HHHHH-------HHhhhcCC-e
Q 002358 767 HISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELN-IVHWA-------RSMIKKGD-V 836 (931)
Q Consensus 767 ~~~~~~~gt~~y~APE~l~~~-~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~-l~~~~-------~~~~~~~~-~ 836 (931)
. .....|++.|+|||.+.+. .++.++|||||||++|||++|+.||.......... ..... ........ .
T Consensus 180 ~-~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 180 V-YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred c-cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence 2 2334589999999998775 78999999999999999999999997443321111 10000 00000000 0
Q ss_pred eecccccccCCC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 837 ISIVDPVLIGNV-----KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 837 ~~i~d~~l~~~~-----~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.....+.+.... .......+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000001111111 1122346889999999999999999999875
No 167
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.1e-36 Score=329.09 Aligned_cols=249 Identities=24% Similarity=0.351 Sum_probs=201.1
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEe
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
.|++.+.||+|+||.||+|.++ +++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++||||
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 86 (284)
T 3kk8_A 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 86 (284)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEec
Confidence 4567899999999999999986 58999999986542 23456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCc---eEEecccccccccc
Q 002358 687 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDFGLSRQAEE 763 (931)
Q Consensus 687 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~---vkL~DFGla~~~~~ 763 (931)
+++|+|.+.+.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||++.....
T Consensus 87 ~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 87 VTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 999999988874 3568999999999999999999998 89999999999999986655 99999999976544
Q ss_pred cccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccccc
Q 002358 764 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 843 (931)
Q Consensus 764 ~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~ 843 (931)
... .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... ..... +..+... ...+
T Consensus 161 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~---~~~~~----~~~~~~~-~~~~- 229 (284)
T 3kk8_A 161 SEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLYAQ----IKAGAYD-YPSP- 229 (284)
T ss_dssp SCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHH----HHHTCCC-CCTT-
T ss_pred Ccc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh---HHHHH----HHhcccc-CCch-
Confidence 322 22346899999999999999999999999999999999999999743321 11111 1111110 0011
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 844 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 844 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
..... ...+.+++.+||+.+|++|||++|+++
T Consensus 230 ~~~~~----~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 230 EWDTV----TPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp TTTTS----CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhccc----CHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00112 236789999999999999999999976
No 168
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=6.5e-37 Score=345.44 Aligned_cols=267 Identities=22% Similarity=0.302 Sum_probs=203.2
Q ss_pred hHHHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEE
Q 002358 605 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 682 (931)
Q Consensus 605 ~l~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~l 682 (931)
++....|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 108 (360)
T 3eqc_A 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 108 (360)
T ss_dssp CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEE
Confidence 334456777889999999999999987 68999999987653 3345679999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccc
Q 002358 683 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 762 (931)
Q Consensus 683 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~ 762 (931)
||||+++|+|.+++.. ...+++..+..++.|+++||+|||+ ..+|+||||||+|||++.++.+||+|||++....
T Consensus 109 v~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 109 CMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp EECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred EEECCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH--hCCEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 9999999999999974 3468899999999999999999997 1389999999999999999999999999987653
Q ss_pred ccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHH--------------
Q 002358 763 EDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWAR-------------- 828 (931)
Q Consensus 763 ~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~-------------- 828 (931)
... .....||+.|+|||++.+..++.++||||||+++|||++|+.||...+............
T Consensus 184 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (360)
T 3eqc_A 184 DSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 260 (360)
T ss_dssp HHC-------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-----------------
T ss_pred ccc---ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccC
Confidence 321 223468999999999999999999999999999999999999997433221110000000
Q ss_pred ---------HhhhcCCeeecccc----cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 829 ---------SMIKKGDVISIVDP----VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 829 ---------~~~~~~~~~~i~d~----~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.........+.++. .............+.+++.+||+.||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 261 GRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp -------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 00000000000000 0000000112336889999999999999999999985
No 169
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.8e-37 Score=340.02 Aligned_cols=259 Identities=21% Similarity=0.311 Sum_probs=193.3
Q ss_pred HhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccch-hhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEecC
Q 002358 611 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH-RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 688 (931)
Q Consensus 611 ~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 688 (931)
|.+.+.||+|+||.||+|... +++.||+|++...... ....+.+|++++++++||||+++++++...+..++||||++
T Consensus 4 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (324)
T 3mtl_A 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD 83 (324)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred eEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc
Confidence 566789999999999999987 6899999998654322 22356689999999999999999999999999999999997
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccccccc
Q 002358 689 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 768 (931)
Q Consensus 689 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~~~ 768 (931)
|+|.+.+... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++........
T Consensus 84 -~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~- 156 (324)
T 3mtl_A 84 -KDLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT- 156 (324)
T ss_dssp -EEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred -cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCccc-
Confidence 5898888753 4568999999999999999999998 89999999999999999999999999999765433222
Q ss_pred ccccccCCCccCCCccCC-CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhc---CCeeecccc--
Q 002358 769 SSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK---GDVISIVDP-- 842 (931)
Q Consensus 769 ~~~~~gt~~y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~---~~~~~i~d~-- 842 (931)
.....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+. ...+.+.... .........
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ---LHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCChHhchhhhcchh
Confidence 223458999999999876 5789999999999999999999999975443222 2222221111 001000000
Q ss_pred -------cccCC----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 843 -------VLIGN----VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 843 -------~l~~~----~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
..... ........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000 00112236789999999999999999999976
No 170
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=7e-37 Score=341.11 Aligned_cols=260 Identities=18% Similarity=0.256 Sum_probs=191.1
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccch--hhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH--RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
..|++.+.||+|+||.||+|... +++.||||+++..... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 113 (329)
T 3gbz_A 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFE 113 (329)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEe
Confidence 35777899999999999999876 6899999999754322 34567899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCcccc-----CCCceEEeccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-----INMRAKVSDFGLSRQ 760 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld-----~~~~vkL~DFGla~~ 760 (931)
|++ |+|.+++.. ...+++..+..++.||++||+|||+ .+|+||||||+|||++ .++.+||+|||+++.
T Consensus 114 ~~~-~~L~~~~~~---~~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 114 YAE-NDLKKYMDK---NPDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp CCS-EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred cCC-CCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 997 599999874 3468999999999999999999998 8999999999999994 455699999999986
Q ss_pred ccccccccccccccCCCccCCCccCCC-CCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhc---CCe
Q 002358 761 AEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK---GDV 836 (931)
Q Consensus 761 ~~~~~~~~~~~~~gt~~y~APE~l~~~-~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~---~~~ 836 (931)
....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+. +.. +...... ...
T Consensus 187 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~-~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 187 FGIPIRQ-FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ--LFK-IFEVLGLPDDTTW 262 (329)
T ss_dssp HC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHH-HHHHHCCCCTTTS
T ss_pred cCCcccc-cCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH--HHH-HHHHhCCCchhhh
Confidence 5433222 2334579999999998774 589999999999999999999999974332211 111 1111100 000
Q ss_pred eecc--------cccccCC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 837 ISIV--------DPVLIGN-----VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 837 ~~i~--------d~~l~~~-----~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.... .+..... ........+.+++.+||+.||++|||++|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000 0000000 00012246789999999999999999999875
No 171
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4.1e-36 Score=328.20 Aligned_cols=245 Identities=29% Similarity=0.431 Sum_probs=195.0
Q ss_pred HhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEec----CCeEEEE
Q 002358 611 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----EHQRILV 683 (931)
Q Consensus 611 ~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~----~~~~~lV 683 (931)
+++.+.||+|+||.||+|.+. ++..||+|++.... ....+.+.+|+.++++++||||+++++++.. ....++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 445678999999999999886 57899999986532 3445779999999999999999999998865 4568999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCC--eEecCCCCCCcccc-CCCceEEeccccccc
Q 002358 684 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLD-INMRAKVSDFGLSRQ 760 (931)
Q Consensus 684 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~--ivH~DIkp~NILld-~~~~vkL~DFGla~~ 760 (931)
|||+++|+|.+++.. ...+++..+..++.|+++||+|||+ .+ |+||||||+|||++ .++.+||+|||++..
T Consensus 108 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 108 TELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEecCCCCHHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 999999999999974 3568899999999999999999998 67 99999999999997 789999999999975
Q ss_pred ccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecc
Q 002358 761 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 840 (931)
Q Consensus 761 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~ 840 (931)
..... .....||+.|+|||.+.+ .++.++||||||+++|+|++|+.||...... ..... .+..+......
T Consensus 182 ~~~~~---~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~----~~~~~~~~~~~ 251 (290)
T 1t4h_A 182 KRASF---AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA--AQIYR----RVTSGVKPASF 251 (290)
T ss_dssp CCTTS---BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH--HHHHH----HHTTTCCCGGG
T ss_pred ccccc---cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcH--HHHHH----HHhccCCcccc
Confidence 43322 223458999999998874 5899999999999999999999999732221 11111 11112111111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 841 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 841 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
+. .. ...+.+++.+||+.+|++|||++|+++
T Consensus 252 ~~----~~----~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 252 DK----VA----IPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GG----CC----CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CC----CC----CHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 11 11 136889999999999999999999875
No 172
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.7e-37 Score=347.92 Aligned_cols=203 Identities=31% Similarity=0.457 Sum_probs=163.2
Q ss_pred HHHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCc--cchhhhhHHHHHHHHHhcC-CCCCcceeEEEecC--Ce
Q 002358 606 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEE--HQ 679 (931)
Q Consensus 606 l~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~il~~l~-HpnIv~l~g~~~~~--~~ 679 (931)
.....|++.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|+.+++++. ||||+++++++... ..
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 34456778899999999999999876 6899999998653 2345567889999999997 99999999999754 37
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccc
Q 002358 680 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 759 (931)
Q Consensus 680 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~ 759 (931)
.++|||||+ |+|.+.+.. ..+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 86 ~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp EEEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence 899999997 689998874 468899999999999999999998 899999999999999999999999999998
Q ss_pred cccccc--------------------cccccccccCCCccCCCccCC-CCCCccchhHHHHHHHHHHHhCCCCCCccC
Q 002358 760 QAEEDL--------------------THISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVED 816 (931)
Q Consensus 760 ~~~~~~--------------------~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~ 816 (931)
...... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 235 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 653210 111233469999999999876 678999999999999999999999997544
No 173
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=9e-36 Score=348.54 Aligned_cols=262 Identities=21% Similarity=0.292 Sum_probs=207.9
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCC-CCCcceeEEEecCCeEEEEEEec
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHH-RNLVPLIGYCEEEHQRILVYEYM 687 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H-pnIv~l~g~~~~~~~~~lV~E~~ 687 (931)
.|++.++||+|+||.||+|++. +++.||||++.... ..+++.+|+++++.++| +++..+..++......++||||+
T Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~ 85 (483)
T 3sv0_A 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL 85 (483)
T ss_dssp TEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred cEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence 4667899999999999999975 68999999876433 23468899999999986 55666666677788899999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccc---cCCCceEEeccccccccccc
Q 002358 688 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEED 764 (931)
Q Consensus 688 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILl---d~~~~vkL~DFGla~~~~~~ 764 (931)
+++|.+++... ...+++..++.++.||+.||+|||+ .+|+||||||+|||| +.++.+||+|||+++.....
T Consensus 86 -g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 86 -GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp -CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred -CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99999999743 4569999999999999999999998 899999999999999 68899999999999876543
Q ss_pred ccc------cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeee
Q 002358 765 LTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 838 (931)
Q Consensus 765 ~~~------~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 838 (931)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+........+..
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEA 239 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHH
Confidence 321 12245699999999999999999999999999999999999999985544333333332222211111111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 839 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 839 i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
+ ...+ ..++.+++.+||+.+|++||++++|++.|+++....
T Consensus 240 l-----~~~~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 240 L-----CRGY----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp H-----HTTS----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred H-----hcCC----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 1 1122 236889999999999999999999999999886543
No 174
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.3e-36 Score=331.08 Aligned_cols=245 Identities=24% Similarity=0.360 Sum_probs=201.2
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc---hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 684 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~ 684 (931)
..|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 35677899999999999999987 578899999864321 22467899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccc
Q 002358 685 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 764 (931)
Q Consensus 685 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~ 764 (931)
||+++|+|.+.+.. ...+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 94 EFAPRGELYKELQK---HGRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp CCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 99999999999874 3468999999999999999999998 89999999999999999999999999998754432
Q ss_pred ccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccc
Q 002358 765 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 844 (931)
Q Consensus 765 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 844 (931)
. .....|++.|+|||.+.+..++.++||||||+++|||++|+.||....... .. . .+..... ..
T Consensus 168 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~---~-~~~~~~~------~~ 231 (284)
T 2vgo_A 168 R---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE---TH---R-RIVNVDL------KF 231 (284)
T ss_dssp C---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH---HH---H-HHHTTCC------CC
T ss_pred c---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH---HH---H-HHhcccc------CC
Confidence 1 233468999999999999999999999999999999999999997433211 11 1 1111111 11
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 845 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 845 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
+......+.+++.+||+.+|++||+++|+++
T Consensus 232 ----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 232 ----PPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 1122346789999999999999999999985
No 175
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=4e-36 Score=339.90 Aligned_cols=254 Identities=16% Similarity=0.167 Sum_probs=204.5
Q ss_pred HHHHhhccccCccCcEEEEEEE------ECCCcEEEEEEccCccchhhhhHHHHHHHHHhcC---CCCCcceeEEEecCC
Q 002358 608 EATNNFCKKIGKGSFGSVYYGK------MKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH---HRNLVPLIGYCEEEH 678 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~------~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~---HpnIv~l~g~~~~~~ 678 (931)
...|.+.+.||+|+||.||+|. ...++.||||+++.. ...++.+|++++++++ |+||+++++++...+
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 3456678899999999999994 346899999999754 3456778888888886 999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCC--CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccC----------
Q 002358 679 QRILVYEYMHNGTLRDRLHGSV--NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---------- 746 (931)
Q Consensus 679 ~~~lV~E~~~~gsL~~~L~~~~--~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~---------- 746 (931)
..++||||+++|+|.+++.... ....+++..++.++.||++||+|||+ .+|+||||||+|||++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC-----
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCcccccc
Confidence 9999999999999999997422 34679999999999999999999998 89999999999999998
Q ss_pred -CCceEEeccccccccccc-ccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHH
Q 002358 747 -NMRAKVSDFGLSRQAEED-LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIV 824 (931)
Q Consensus 747 -~~~vkL~DFGla~~~~~~-~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~ 824 (931)
++.+||+|||+++..... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----- 292 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE----- 292 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-----
T ss_pred ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-----
Confidence 899999999999764321 1222344569999999999999999999999999999999999999996322110
Q ss_pred HHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCC-CCHHHHHHHHHhhhhhh
Q 002358 825 HWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSR-PKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 825 ~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~R-Ps~~evl~~L~~~~~~~ 888 (931)
. .+...+.... ....+.+++.+|++.+|.+| |+++++.+.|++.....
T Consensus 293 ------------~-~~~~~~~~~~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 293 ------------C-KPEGLFRRLP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp ------------E-EECSCCTTCS---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred ------------e-eechhccccC---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 0 0111111111 13356789999999999998 58999999999887654
No 176
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=3.7e-36 Score=334.97 Aligned_cols=260 Identities=21% Similarity=0.257 Sum_probs=203.4
Q ss_pred cChhhHHHHHHhhc-cccCccCcEEEEEEEEC-CCcEEEEEEccCccc--hhhhhHHHHHHHHHhcC-CCCCcceeEEEe
Q 002358 601 IPLPELEEATNNFC-KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIH-HRNLVPLIGYCE 675 (931)
Q Consensus 601 ~~~~~l~~~~~~~~-~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~-HpnIv~l~g~~~ 675 (931)
+...+.....|.+. +.||+|+||.||+|... +++.||+|++..... .....+.+|+.++++++ ||||+++++++.
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~ 99 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 33445556666665 88999999999999887 689999999875432 23567899999999995 699999999999
Q ss_pred cCCeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccC---CCceEE
Q 002358 676 EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKV 752 (931)
Q Consensus 676 ~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~---~~~vkL 752 (931)
+....++||||+++|+|.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+|||++. ++.+||
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~kL 175 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKI 175 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEEE
T ss_pred eCCeEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEEE
Confidence 999999999999999999998643 34678999999999999999999998 89999999999999987 789999
Q ss_pred ecccccccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhh
Q 002358 753 SDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 832 (931)
Q Consensus 753 ~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~ 832 (931)
+|||+++....... .....||+.|+|||++.+..++.++||||||+++|||++|+.||...+.... ...+..
T Consensus 176 ~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~i~~--- 247 (327)
T 3lm5_A 176 VDFGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET---YLNISQ--- 247 (327)
T ss_dssp CCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHH---
T ss_pred eeCccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH---HHHHHh---
Confidence 99999987643322 2234689999999999999999999999999999999999999974332211 111111
Q ss_pred cCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 833 KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 833 ~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
... .............+.+++.+||+.+|++|||++|+++
T Consensus 248 -~~~------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 248 -VNV------DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp -TCC------CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -ccc------ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 110 0000111122346789999999999999999999875
No 177
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.4e-36 Score=330.02 Aligned_cols=246 Identities=21% Similarity=0.302 Sum_probs=198.2
Q ss_pred HHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc--chhhhhHHHHHHHHHhc-CCCCCcceeEEEecCCeEEE
Q 002358 607 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRIL 682 (931)
Q Consensus 607 ~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~~~~l 682 (931)
....|++.+.||+|+||.||+|... +++.||+|++.... .....++.+|+..+.++ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3466778899999999999999987 79999999987532 33456788999999999 89999999999999999999
Q ss_pred EEEecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCC--------------
Q 002358 683 VYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN-------------- 747 (931)
Q Consensus 683 V~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~-------------- 747 (931)
||||+++|+|.+++.... ....+++..+..++.|+++||+|||+ .+|+||||||+|||++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 999999999999987432 12568999999999999999999998 899999999999999844
Q ss_pred -----CceEEecccccccccccccccccccccCCCccCCCccCCC-CCCccchhHHHHHHHHHHHhCCCCCCccCccchh
Q 002358 748 -----MRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAEL 821 (931)
Q Consensus 748 -----~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~-~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~ 821 (931)
..+||+|||++....... ...||+.|+|||.+.+. .++.++||||||+++|||++|..|+....
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----- 235 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD----- 235 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH-----
T ss_pred ccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh-----
Confidence 479999999998754432 23489999999998765 66689999999999999999998764221
Q ss_pred hHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 822 NIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 822 ~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.. . .+..+.... +.... ...+.+++.+||+.||++||+++|+++
T Consensus 236 ~~-~----~~~~~~~~~-----~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 236 QW-H----EIRQGRLPR-----IPQVL----SQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp HH-H----HHHTTCCCC-----CSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HH-H----HHHcCCCCC-----CCccc----CHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 11 1 112222211 11122 236889999999999999999999874
No 178
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=3.4e-36 Score=330.92 Aligned_cols=247 Identities=29% Similarity=0.437 Sum_probs=203.6
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEec
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 687 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 687 (931)
.|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+....++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 102 (303)
T 3a7i_A 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 102 (303)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeC
Confidence 3566889999999999999875 68999999986543 334578999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccccc
Q 002358 688 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 767 (931)
Q Consensus 688 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~~ 767 (931)
++++|.+++.. ..+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++.........
T Consensus 103 ~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 175 (303)
T 3a7i_A 103 GGGSALDLLEP----GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 175 (303)
T ss_dssp TTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCC
T ss_pred CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCccccc
Confidence 99999999863 468999999999999999999998 89999999999999999999999999999876443222
Q ss_pred cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccCC
Q 002358 768 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 847 (931)
Q Consensus 768 ~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~ 847 (931)
.....|++.|+|||.+.+..++.++||||||+++|||++|+.||...... ..... +..+.. +.+...
T Consensus 176 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~----~~~~~~-----~~~~~~ 242 (303)
T 3a7i_A 176 -RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM---KVLFL----IPKNNP-----PTLEGN 242 (303)
T ss_dssp -BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHHH----HHHSCC-----CCCCSS
T ss_pred -cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH---HHHHH----hhcCCC-----CCCccc
Confidence 23346899999999999999999999999999999999999999733221 11111 111111 111222
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002358 848 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 880 (931)
Q Consensus 848 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 880 (931)
++ ..+.+++.+||+.+|++||+++|+++.
T Consensus 243 ~~----~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 243 YS----KPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp CC----HHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred cC----HHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 22 368899999999999999999999864
No 179
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=4e-36 Score=350.81 Aligned_cols=259 Identities=22% Similarity=0.284 Sum_probs=192.5
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCc--cchhhhhHHHHHHHHHhcCCCCCcceeEEEecC------CeE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE------HQR 680 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~------~~~ 680 (931)
.|++.+.||+|+||.||+|... +++.||||++... .....+++.+|+++++.++||||+++++++... ...
T Consensus 63 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~ 142 (464)
T 3ttj_A 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV 142 (464)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeE
Confidence 4667899999999999999876 6899999999754 233457789999999999999999999999654 467
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccc
Q 002358 681 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 760 (931)
Q Consensus 681 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~ 760 (931)
++||||+++ +|.+.+.. .+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 143 ~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 143 YLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred EEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 999999976 46666642 38899999999999999999998 8999999999999999999999999999987
Q ss_pred ccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHH-HH-------------
Q 002358 761 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIV-HW------------- 826 (931)
Q Consensus 761 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~-~~------------- 826 (931)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+..+....+ +.
T Consensus 214 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~ 291 (464)
T 3ttj_A 214 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 291 (464)
T ss_dssp ---CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSC
T ss_pred cCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcc
Confidence 64422 233456899999999999999999999999999999999999999754432211110 00
Q ss_pred --HHHhhhcCC------eeecccccccCCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 827 --ARSMIKKGD------VISIVDPVLIGNV---KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 827 --~~~~~~~~~------~~~i~d~~l~~~~---~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
....+.... ........+.... .......+.+++.+||+.||++|||++|+++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000000 0000000000000 0112446889999999999999999999985
No 180
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.4e-36 Score=336.44 Aligned_cols=247 Identities=23% Similarity=0.360 Sum_probs=202.5
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc---chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 684 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~ 684 (931)
..|.+.+.||+|+||.||++... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 34667899999999999999987 47899999986542 234567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccc
Q 002358 685 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 764 (931)
Q Consensus 685 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~ 764 (931)
||+++++|.+++.. ...+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 121 e~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 121 ELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp CCCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred ecCCCCCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 99999999998873 3568999999999999999999998 89999999999999999999999999999875432
Q ss_pred ccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccc
Q 002358 765 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 844 (931)
Q Consensus 765 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 844 (931)
.. ......|++.|+|||++.+..++.++||||||+++|||++|+.||....... ... . +..+.. .+
T Consensus 195 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~---~-~~~~~~------~~ 260 (335)
T 2owb_A 195 GE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---TYL---R-IKKNEY------SI 260 (335)
T ss_dssp TC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHH---H-HHHTCC------CC
T ss_pred cc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH---HHH---H-HhcCCC------CC
Confidence 22 1233468999999999999899999999999999999999999997433211 111 1 111111 11
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 845 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 845 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.... ...+.+++.+||+.||++||+++|+++
T Consensus 261 ~~~~----~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 261 PKHI----NPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp CTTS----CHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CccC----CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1112 236789999999999999999999986
No 181
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.6e-36 Score=357.69 Aligned_cols=250 Identities=26% Similarity=0.324 Sum_probs=203.0
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc---chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
.+++.+.||+|+||.||+|+.+ +|+.||+|++.... ......+.+|+++|++++||||+++++++.+.+..++|||
T Consensus 185 ~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE 264 (576)
T 2acx_A 185 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 264 (576)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEE
Confidence 3556789999999999999986 68999999986532 2234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
|+++|+|.+++... ....+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 265 y~~gg~L~~~l~~~-~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~ 340 (576)
T 2acx_A 265 LMNGGDLKFHIYHM-GQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340 (576)
T ss_dssp CCCSCBHHHHHHSS-SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred cCCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence 99999999998753 23458999999999999999999998 899999999999999999999999999998764432
Q ss_pred cccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccch-hhHHHHHHHhhhcCCeeecccccc
Q 002358 766 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE-LNIVHWARSMIKKGDVISIVDPVL 844 (931)
Q Consensus 766 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~-~~l~~~~~~~~~~~~~~~i~d~~l 844 (931)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..+.. .+.....
T Consensus 341 ~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~----~i~~~~~-------- 406 (576)
T 2acx_A 341 T--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER----LVKEVPE-------- 406 (576)
T ss_dssp C--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHH----HHHHCCC--------
T ss_pred c--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHH----Hhhcccc--------
Confidence 2 2234699999999999999999999999999999999999999975433221 11221 1111110
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 002358 845 IGNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVL 879 (931)
Q Consensus 845 ~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~ 879 (931)
.++......+.+++.+||+.||++|| +++||++
T Consensus 407 --~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 407 --EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred --cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 11111223678999999999999999 6788764
No 182
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-36 Score=338.05 Aligned_cols=262 Identities=20% Similarity=0.212 Sum_probs=196.3
Q ss_pred HHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccch-----hhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEE
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH-----RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 681 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~-----~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~ 681 (931)
...|++.+.||+|+||.||+|.+. +|+.||||++...... ..+.+.+|++++++++||||+++++++.+....+
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 356777899999999999999986 5899999998753221 1356889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccc
Q 002358 682 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 761 (931)
Q Consensus 682 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~ 761 (931)
+||||+++ +|.+.+.. ....+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 89 lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 89 LVFDFMET-DLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp EEEECCSE-EHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred EEEEcCCC-CHHHHHHh--cCcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 99999985 89888874 34568888999999999999999998 89999999999999999999999999999876
Q ss_pred cccccccccccccCCCccCCCccCCC-CCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhc---CCee
Q 002358 762 EEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK---GDVI 837 (931)
Q Consensus 762 ~~~~~~~~~~~~gt~~y~APE~l~~~-~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~---~~~~ 837 (931)
..... ......||+.|+|||++.+. .++.++|||||||++|||++|..||......+ ....+...... ....
T Consensus 163 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~ 238 (346)
T 1ua2_A 163 GSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD---QLTRIFETLGTPTEEQWP 238 (346)
T ss_dssp TSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCCCCTTTSS
T ss_pred cCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH---HHHHHHHHcCCCChhhhh
Confidence 44322 22334689999999998654 58899999999999999999999997443221 11111111110 0000
Q ss_pred ec---ccc---cccCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 838 SI---VDP---VLIGNVK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 838 ~i---~d~---~l~~~~~-----~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.. .+. ......+ ......+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp STTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00 000 0000001 112247889999999999999999999876
No 183
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=8.6e-36 Score=341.55 Aligned_cols=245 Identities=22% Similarity=0.318 Sum_probs=187.5
Q ss_pred cccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHh-cCCCCCcceeEEEec----CCeEEEEEEecC
Q 002358 615 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSR-IHHRNLVPLIGYCEE----EHQRILVYEYMH 688 (931)
Q Consensus 615 ~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~-l~HpnIv~l~g~~~~----~~~~~lV~E~~~ 688 (931)
+.||+|+||.||+|.++ +++.||||+++.. ..+.+|++++.+ .+||||+++++++.. ....++||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 68999999999999987 6899999998642 456788888754 489999999998865 567899999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccC---CCceEEecccccccccccc
Q 002358 689 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 689 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~---~~~vkL~DFGla~~~~~~~ 765 (931)
+|+|.+++... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||+++......
T Consensus 143 gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~ 218 (400)
T 1nxk_A 143 GGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN 218 (400)
T ss_dssp SEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC---
T ss_pred CCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEecccccccCCCC
Confidence 99999999853 23468999999999999999999998 89999999999999987 7889999999998654322
Q ss_pred cccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccch-hhHHHHHHHhhhcCCeeecccccc
Q 002358 766 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE-LNIVHWARSMIKKGDVISIVDPVL 844 (931)
Q Consensus 766 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~-~~l~~~~~~~~~~~~~~~i~d~~l 844 (931)
......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..... .+..+... ...+ .
T Consensus 219 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~----~i~~~~~~-~~~~-~ 290 (400)
T 1nxk_A 219 --SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT----RIRMGQYE-FPNP-E 290 (400)
T ss_dssp ----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHH----HHHHTCCC-CCTT-T
T ss_pred --ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHH----HHHcCccc-CCCc-c
Confidence 12345689999999999999999999999999999999999999974432211 11111 11111110 0000 0
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002358 845 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 880 (931)
Q Consensus 845 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 880 (931)
.. .....+.+++.+||+.||++|||++|+++.
T Consensus 291 ~~----~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 291 WS----EVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cc----cCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01 122367899999999999999999999863
No 184
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=3.5e-36 Score=338.23 Aligned_cols=265 Identities=20% Similarity=0.269 Sum_probs=197.7
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc--hhhhhHHHHHHHHHhcCCCCCcceeEEEec--------C
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEE--------E 677 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--------~ 677 (931)
..|++.+.||+|+||.||+|+.. +|+.||+|++..... .....+.+|++++++++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 35677899999999999999985 789999999865432 234578899999999999999999999876 4
Q ss_pred CeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccc
Q 002358 678 HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGL 757 (931)
Q Consensus 678 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGl 757 (931)
+..++||||+++ +|.+.+... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred ceEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 468999999975 777777642 3568999999999999999999998 8999999999999999999999999999
Q ss_pred cccccccc---cccccccccCCCccCCCccCC-CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhc
Q 002358 758 SRQAEEDL---THISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 833 (931)
Q Consensus 758 a~~~~~~~---~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~ 833 (931)
++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.........
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 250 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 250 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 98654221 122234468999999998876 56899999999999999999999999854332222211111111111
Q ss_pred CCeeeccccccc-------C-CCCH-HH------HHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 834 GDVISIVDPVLI-------G-NVKI-ES------IWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 834 ~~~~~i~d~~l~-------~-~~~~-~~------~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
......-+.... . .... +. ...+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 000000000000 0 0000 11 124789999999999999999999875
No 185
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1e-36 Score=330.65 Aligned_cols=253 Identities=26% Similarity=0.371 Sum_probs=200.6
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEe--cCCeEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCE--EEHQRILVY 684 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~~~lV~ 684 (931)
.|++.+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|++++++++||||+++++++. .....++||
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 86 (279)
T 2w5a_A 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86 (279)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEE
T ss_pred heeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEE
Confidence 4567899999999999999986 68999999987542 334567999999999999999999999874 467889999
Q ss_pred EecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCC-----eEecCCCCCCccccCCCceEEeccccc
Q 002358 685 EYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG-----IIHRDVKSSNILLDINMRAKVSDFGLS 758 (931)
Q Consensus 685 E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~-----ivH~DIkp~NILld~~~~vkL~DFGla 758 (931)
||+++|+|.+++.... ....+++..++.++.|+++||+|||+ .+ ++||||||+||+++.++.+||+|||++
T Consensus 87 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~ 163 (279)
T 2w5a_A 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163 (279)
T ss_dssp ECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred eCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence 9999999999987532 33458999999999999999999998 66 999999999999999999999999998
Q ss_pred ccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeee
Q 002358 759 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 838 (931)
Q Consensus 759 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 838 (931)
+........ .....|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ..+.. .+..+....
T Consensus 164 ~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~----~i~~~~~~~ 235 (279)
T 2w5a_A 164 RILNHDTSF-AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ---KELAG----KIREGKFRR 235 (279)
T ss_dssp HHC---CHH-HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHH----HHHHTCCCC
T ss_pred eeecccccc-ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH---HHHHH----HHhhccccc
Confidence 765433221 2234589999999999998999999999999999999999999974332 11211 222222211
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002358 839 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQ 882 (931)
Q Consensus 839 i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 882 (931)
+... ....+.+++.+||+.+|++||+++||++.+.
T Consensus 236 -----~~~~----~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 236 -----IPYR----YSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp -----CCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred -----CCcc----cCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 1112 2246889999999999999999999987543
No 186
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.2e-36 Score=331.89 Aligned_cols=251 Identities=20% Similarity=0.359 Sum_probs=197.1
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEec
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 687 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 687 (931)
..|++.+.||+|+||.||+|.+. +++.||+|++........+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (302)
T 2j7t_A 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC 98 (302)
T ss_dssp GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECC
T ss_pred cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeC
Confidence 34667899999999999999987 58999999987665556678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccccc
Q 002358 688 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 767 (931)
Q Consensus 688 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~~ 767 (931)
++++|.+++... ...+++..+..++.|+++||.|||+ .+++||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 172 (302)
T 2j7t_A 99 PGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ- 172 (302)
T ss_dssp TTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH-
T ss_pred CCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCcccccccc-
Confidence 999999988642 3568999999999999999999998 8999999999999999999999999998764322211
Q ss_pred cccccccCCCccCCCcc-----CCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccc
Q 002358 768 ISSVARGTVGYLDPEYY-----GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 842 (931)
Q Consensus 768 ~~~~~~gt~~y~APE~l-----~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~ 842 (931)
......|++.|+|||.+ ....++.++||||||+++|||++|+.||...+.. .. ...... ........
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~---~~~~~~-~~~~~~~~- 244 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM---RV---LLKIAK-SDPPTLLT- 244 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HH---HHHHHH-SCCCCCSS-
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH---HH---HHHHhc-cCCcccCC-
Confidence 12234589999999998 4677899999999999999999999999743221 11 111111 11111111
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 843 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 843 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
+......+.+++.+||+.+|++|||++|+++
T Consensus 245 ------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 245 ------PSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp ------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ------ccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1122346889999999999999999999874
No 187
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.5e-36 Score=348.16 Aligned_cols=254 Identities=24% Similarity=0.347 Sum_probs=192.3
Q ss_pred hHHHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc--------chhhhhHHHHHHHHHhcCCCCCcceeEEEe
Q 002358 605 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--------SHRTQQFVTEVALLSRIHHRNLVPLIGYCE 675 (931)
Q Consensus 605 ~l~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~--------~~~~~~~~~E~~il~~l~HpnIv~l~g~~~ 675 (931)
......|.+.+.||+|+||.||+|..+ +++.||||++.... ......+.+|+++|++++||||+++++++.
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 210 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 210 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 445567888999999999999999876 58999999986432 112346889999999999999999999986
Q ss_pred cCCeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCC---CceEE
Q 002358 676 EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN---MRAKV 752 (931)
Q Consensus 676 ~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~---~~vkL 752 (931)
. +..++||||+++|+|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.+ ..+||
T Consensus 211 ~-~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 211 A-EDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp S-SEEEEEEECCTTCBGGGGTSS---SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred c-CceEEEEEcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEE
Confidence 4 457899999999999998873 4678999999999999999999998 899999999999999754 45999
Q ss_pred ecccccccccccccccccccccCCCccCCCccCC---CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHH
Q 002358 753 SDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN---QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS 829 (931)
Q Consensus 753 ~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~---~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~ 829 (931)
+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .+..
T Consensus 284 ~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--~~~~---- 355 (419)
T 3i6u_A 284 TDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKD---- 355 (419)
T ss_dssp CCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC--CHHH----
T ss_pred eecccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH--HHHH----
Confidence 9999998765432 2234568999999999853 677889999999999999999999997433221 1111
Q ss_pred hhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 830 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 830 ~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.+..+.... .+..... ....+.+++.+||+.||++||+++|+++
T Consensus 356 ~i~~~~~~~--~~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 356 QITSGKYNF--IPEVWAE----VSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHHTTCCCC--CHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhcCCCCC--Cchhhcc----cCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 111121110 0111111 1236789999999999999999999885
No 188
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.5e-36 Score=331.14 Aligned_cols=259 Identities=28% Similarity=0.420 Sum_probs=197.0
Q ss_pred HHHHhhccccCccCcEEEEEEEEC--CCc--EEEEEEccCcc---chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeE
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK--DGK--EVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 680 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~--~g~--~vAvK~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~ 680 (931)
...|++.+.||+|+||.||+|++. +++ .||+|+++... ....+.+.+|++++++++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 345778899999999999999864 233 68999987542 344578999999999999999999999998765 7
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccc
Q 002358 681 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 760 (931)
Q Consensus 681 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~ 760 (931)
++|+||+++|+|.+.+... ...+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++..
T Consensus 96 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEcccccccc
Confidence 8999999999999998742 3568899999999999999999998 8999999999999999999999999999987
Q ss_pred ccccccc--cccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCee
Q 002358 761 AEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVI 837 (931)
Q Consensus 761 ~~~~~~~--~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~ 837 (931)
....... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .... .....+...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~---~~~~~~~~~ 244 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS---QILH---KIDKEGERL 244 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHH---HHHTSCCCC
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH---HHHH---HHHccCCCC
Confidence 6443221 1223457888999999988889999999999999999999 99999743321 1111 111111110
Q ss_pred ecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 002358 838 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 887 (931)
Q Consensus 838 ~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 887 (931)
.. +......+.+++.+||+.+|++||+++++++.|+++...
T Consensus 245 -----~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 245 -----PR----PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp -----CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred -----CC----CcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 01 112234688999999999999999999999999987643
No 189
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3.7e-36 Score=325.68 Aligned_cols=245 Identities=24% Similarity=0.395 Sum_probs=193.2
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc---hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
.|.+.+.||+|+||.||+|.++ +|+.||+|++..... ...+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 91 (276)
T 2h6d_A 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVME 91 (276)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEe
Confidence 4667899999999999999987 799999999865321 234578899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
|+++++|.+++.. ...+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 92 YVSGGELFDYICK---HGRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp CCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred ccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 9999999999874 3468899999999999999999998 899999999999999999999999999998754432
Q ss_pred cccccccccCCCccCCCccCCCCC-CccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccc
Q 002358 766 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 844 (931)
Q Consensus 766 ~~~~~~~~gt~~y~APE~l~~~~~-s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 844 (931)
. .....|++.|+|||.+.+..+ +.++||||||+++|+|++|+.||...... ...+ .+..+.. .+
T Consensus 166 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~----~~~~~~~------~~ 230 (276)
T 2h6d_A 166 F--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP---TLFK----KIRGGVF------YI 230 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHCCC------CC
T ss_pred c--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH---HHHH----HhhcCcc------cC
Confidence 1 223458999999999988765 68999999999999999999999743221 1111 1211111 01
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 845 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 845 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
+......+.+++.+||+.||++||+++|+++
T Consensus 231 ----~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 231 ----PEYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp ----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ----chhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 1112236789999999999999999999986
No 190
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=7e-36 Score=330.01 Aligned_cols=252 Identities=25% Similarity=0.361 Sum_probs=198.8
Q ss_pred HHHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEE
Q 002358 606 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 684 (931)
Q Consensus 606 l~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~ 684 (931)
.....|++.+.||+|+||.||+|.++ +|+.||+|++.... ..+.+.+|++++++++||||+++++++...+..++||
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 34456777899999999999999987 58999999987532 3467899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccc
Q 002358 685 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 764 (931)
Q Consensus 685 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~ 764 (931)
||+++|+|.+++.. ....+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 104 e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (314)
T 3com_A 104 EYCGAGSVSDIIRL--RNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT 178 (314)
T ss_dssp ECCTTEEHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred ecCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence 99999999999863 24568999999999999999999998 89999999999999999999999999999775443
Q ss_pred ccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccc
Q 002358 765 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 844 (931)
Q Consensus 765 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 844 (931)
... .....|++.|+|||.+.+..++.++||||||+++|||++|+.||....... ... . +..........
T Consensus 179 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~---~-~~~~~~~~~~~--- 247 (314)
T 3com_A 179 MAK-RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR---AIF---M-IPTNPPPTFRK--- 247 (314)
T ss_dssp BSC-BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH---HHH---H-HHHSCCCCCSS---
T ss_pred ccc-cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH---HHH---H-HhcCCCcccCC---
Confidence 222 233458999999999999999999999999999999999999997332211 111 1 11111111111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 845 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 845 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
+......+.+++.+||+.||++||+++|+++
T Consensus 248 ----~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 248 ----PELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp ----GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ----cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1112346889999999999999999999975
No 191
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=5.9e-36 Score=341.21 Aligned_cols=268 Identities=22% Similarity=0.272 Sum_probs=204.4
Q ss_pred ChhhHHHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcC--------CCCCcceeE
Q 002358 602 PLPELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH--------HRNLVPLIG 672 (931)
Q Consensus 602 ~~~~l~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~--------HpnIv~l~g 672 (931)
...++....|++.++||+|+||.||+|... +++.||||+++.. ....+.+.+|++++++++ |+||+++++
T Consensus 30 ~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~ 108 (397)
T 1wak_A 30 KIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLD 108 (397)
T ss_dssp CTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEE
T ss_pred ehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeec
Confidence 344445567888999999999999999875 6889999999754 344567889999999996 788999999
Q ss_pred EEe----cCCeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCC-CeEecCCCCCCccccCC
Q 002358 673 YCE----EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDIN 747 (931)
Q Consensus 673 ~~~----~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~-~ivH~DIkp~NILld~~ 747 (931)
++. .....++||||+ +++|.+.+... ....+++..++.++.||++||+|||+ + +|+||||||+|||++.+
T Consensus 109 ~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~ 183 (397)
T 1wak_A 109 DFKISGVNGTHICMVFEVL-GHHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVN 183 (397)
T ss_dssp EEEEEETTEEEEEEEECCC-CCBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCC
T ss_pred ceeecCCCCceEEEEEecc-CccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEecc
Confidence 987 566889999999 56666666543 23568999999999999999999998 6 99999999999999877
Q ss_pred C-------------------------------------------------ceEEecccccccccccccccccccccCCCc
Q 002358 748 M-------------------------------------------------RAKVSDFGLSRQAEEDLTHISSVARGTVGY 778 (931)
Q Consensus 748 ~-------------------------------------------------~vkL~DFGla~~~~~~~~~~~~~~~gt~~y 778 (931)
+ .+||+|||+++..... .....||+.|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y 259 (397)
T 1wak_A 184 EQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQY 259 (397)
T ss_dssp HHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGG
T ss_pred chhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcc
Confidence 5 7999999999875433 2234589999
Q ss_pred cCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchh---hHHHHHHHhhhc--------C-----------Ce
Q 002358 779 LDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAEL---NIVHWARSMIKK--------G-----------DV 836 (931)
Q Consensus 779 ~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~---~l~~~~~~~~~~--------~-----------~~ 836 (931)
+|||++.+..++.++|||||||++|||++|+.||......... .....+.+.... + ..
T Consensus 260 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 339 (397)
T 1wak_A 260 RSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDL 339 (397)
T ss_dssp CCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSB
T ss_pred cCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccc
Confidence 9999999999999999999999999999999999754432211 111111111110 0 00
Q ss_pred eecccccc---------cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 837 ISIVDPVL---------IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 837 ~~i~d~~l---------~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
..+.+... ....+......+.+++.+||+.||++|||++|+++
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 340 KHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp SSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred ccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00000000 00224556678999999999999999999999875
No 192
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=7.2e-36 Score=348.41 Aligned_cols=193 Identities=26% Similarity=0.379 Sum_probs=153.6
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEec-----CCeE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE-----EHQR 680 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-----~~~~ 680 (931)
..|++.+.||+|+||.||+|.++ +++.||||++.... ....+.+.+|+++|++++||||+++++++.. ....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 35777899999999999999876 68999999986532 2345779999999999999999999999843 3578
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccc
Q 002358 681 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 760 (931)
Q Consensus 681 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~ 760 (931)
++||||+ +|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 133 ~lv~e~~-~~~L~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRT---PVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp EEEECCC-SEEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEecc-ccchhhhccc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccchh
Confidence 9999998 5799999873 4679999999999999999999998 8999999999999999999999999999987
Q ss_pred cccccc--------------------------ccccccccCCCccCCCcc-CCCCCCccchhHHHHHHHHHHHhC
Q 002358 761 AEEDLT--------------------------HISSVARGTVGYLDPEYY-GNQQLTEKSDVYSFGVVLLELISG 808 (931)
Q Consensus 761 ~~~~~~--------------------------~~~~~~~gt~~y~APE~l-~~~~~s~ksDVwSlGvlL~eLltG 808 (931)
...... .......||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 542211 112334689999999976 566799999999999999999993
No 193
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=9e-36 Score=331.51 Aligned_cols=256 Identities=20% Similarity=0.290 Sum_probs=196.9
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcC-CCCCcceeEEEec--CCeEEEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEE--EHQRILVY 684 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~g~~~~--~~~~~lV~ 684 (931)
..|++.+.||+|+||.||+|... +++.||||+++.. ..+.+.+|++++++++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 45777899999999999999875 6899999998743 3467899999999997 9999999999987 66789999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCC-ceEEecccccccccc
Q 002358 685 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM-RAKVSDFGLSRQAEE 763 (931)
Q Consensus 685 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~-~vkL~DFGla~~~~~ 763 (931)
||+++++|.+++. .+++..+..++.|+++||+|||+ .+|+||||||+|||++.++ .+||+|||+++....
T Consensus 113 e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp ECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred eccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 9999999999885 27888999999999999999998 8999999999999999776 899999999986543
Q ss_pred cccccccccccCCCccCCCccCC-CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHH--------HhhhcC
Q 002358 764 DLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWAR--------SMIKKG 834 (931)
Q Consensus 764 ~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~--------~~~~~~ 834 (931)
... .....|++.|+|||.+.+ ..++.++|||||||++|||++|+.||...... ...+..... ..+...
T Consensus 184 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~ 260 (330)
T 3nsz_A 184 GQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQLVRIAKVLGTEDLYDYIDKY 260 (330)
T ss_dssp TCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH-HHHHHHHHHHHCHHHHHHHHHHT
T ss_pred CCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch-HHHHHHHHHhcCCchhhhHHHHh
Confidence 322 233458999999999877 67899999999999999999999999532221 111111000 000000
Q ss_pred Ce--------------eecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 835 DV--------------ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 835 ~~--------------~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.. ...................+.+++.+||+.||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 0000000011111112347889999999999999999999985
No 194
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-36 Score=340.09 Aligned_cols=254 Identities=22% Similarity=0.299 Sum_probs=191.9
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecCC------eE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH------QR 680 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~------~~ 680 (931)
.|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.... ..
T Consensus 26 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~ 105 (367)
T 1cm8_A 26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF 105 (367)
T ss_dssp SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred eEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceE
Confidence 4667889999999999999985 68999999986532 234567899999999999999999999997653 46
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccc
Q 002358 681 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 760 (931)
Q Consensus 681 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~ 760 (931)
++||||+ +++|.+++.. ..+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 106 ~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 106 YLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp EEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 9999999 8899999874 458899999999999999999998 8999999999999999999999999999987
Q ss_pred ccccccccccccccCCCccCCCccCC-CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCC----
Q 002358 761 AEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD---- 835 (931)
Q Consensus 761 ~~~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~---- 835 (931)
.... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+..+... .+........
T Consensus 178 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~---~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 178 ADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLK---EIMKVTGTPPAEFV 250 (367)
T ss_dssp CCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHHHCCCCHHHH
T ss_pred cccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHhcCCCCHHHH
Confidence 5432 223468999999999876 689999999999999999999999997544322111 1111000000
Q ss_pred --------------eeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 836 --------------VISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 836 --------------~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
........+. .........+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhhhHHHHHHHHhCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0000000000 011122346789999999999999999999886
No 195
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.4e-35 Score=349.24 Aligned_cols=251 Identities=28% Similarity=0.418 Sum_probs=198.4
Q ss_pred HHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEE
Q 002358 607 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 683 (931)
Q Consensus 607 ~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV 683 (931)
....|++.+.||+|+||.||+|+.+ +++.||+|++.... ......+.+|+++++.++||||+++++++.+....++|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 4567888999999999999999987 68899999987543 23356789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccC---CCceEEeccccccc
Q 002358 684 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQ 760 (931)
Q Consensus 684 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~---~~~vkL~DFGla~~ 760 (931)
|||+++|+|.+.+.. ...+++..+..++.||++||+|||+ .+|+||||||+|||++. ++.+||+|||+++.
T Consensus 115 ~e~~~~g~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 115 MECYKGGELFDEIIH---RMKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 999999999998873 3568999999999999999999998 89999999999999976 45599999999987
Q ss_pred ccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecc
Q 002358 761 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 840 (931)
Q Consensus 761 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~ 840 (931)
...... .....||+.|+|||++. ..++.++||||+||++|+|++|..||...... .+.. .+..+... .
T Consensus 189 ~~~~~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~----~i~~~~~~-~- 256 (494)
T 3lij_A 189 FENQKK--MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ---EILR----KVEKGKYT-F- 256 (494)
T ss_dssp CBTTBC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHTCCC-C-
T ss_pred CCCCcc--ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH---HHHH----HHHhCCCC-C-
Confidence 654322 23356999999999986 46899999999999999999999999743322 1111 12122111 0
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 841 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 841 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
+....... ...+.+++.+||+.+|++|||++|+++
T Consensus 257 ~~~~~~~~----s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 257 DSPEWKNV----SEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp CSGGGTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CchhcccC----CHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 11111112 236789999999999999999999985
No 196
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.7e-35 Score=342.61 Aligned_cols=197 Identities=25% Similarity=0.352 Sum_probs=165.7
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecC-----CeEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-----HQRI 681 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~-----~~~~ 681 (931)
.|++.+.||+|+||.||+|.++ +++.||||++.... ....+.+.+|+++|++++||||+++++++... ...+
T Consensus 27 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 106 (432)
T 3n9x_A 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY 106 (432)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred CEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEE
Confidence 5677899999999999999986 57899999997532 23457899999999999999999999999765 5789
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccc
Q 002358 682 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 761 (931)
Q Consensus 682 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~ 761 (931)
+||||+. |+|.+++.. ...+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 107 lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 107 IVLEIAD-SDLKKLFKT---PIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEECCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEecCC-cCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 9999986 699999973 4569999999999999999999998 89999999999999999999999999999875
Q ss_pred cccccc---------------------cccccccCCCccCCCcc-CCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 002358 762 EEDLTH---------------------ISSVARGTVGYLDPEYY-GNQQLTEKSDVYSFGVVLLELISGKKPVS 813 (931)
Q Consensus 762 ~~~~~~---------------------~~~~~~gt~~y~APE~l-~~~~~s~ksDVwSlGvlL~eLltG~~Pf~ 813 (931)
...... ......||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 433211 12445689999999985 56679999999999999999998655554
No 197
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=9.4e-36 Score=351.99 Aligned_cols=246 Identities=24% Similarity=0.313 Sum_probs=199.3
Q ss_pred HhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc---hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEe
Q 002358 611 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 611 ~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
+++.+.||+|+||.||+|+++ +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+....++||||
T Consensus 187 f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~ 266 (543)
T 3c4z_A 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTI 266 (543)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEe
Confidence 445678999999999999986 689999999865322 2345788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 687 MHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 687 ~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
+++|+|.+++.... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 267 ~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~ 343 (543)
T 3c4z_A 267 MNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343 (543)
T ss_dssp CTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred ccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeeccCCC
Confidence 99999999987542 24568999999999999999999998 899999999999999999999999999998765433
Q ss_pred cccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccch-hhHHHHHHHhhhcCCeeecccccc
Q 002358 766 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE-LNIVHWARSMIKKGDVISIVDPVL 844 (931)
Q Consensus 766 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~-~~l~~~~~~~~~~~~~~~i~d~~l 844 (931)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..+.+ .+.....
T Consensus 344 ~~-~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~----~i~~~~~-------- 410 (543)
T 3c4z_A 344 TK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ----RVLEQAV-------- 410 (543)
T ss_dssp CC-BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHH----HHHHCCC--------
T ss_pred cc-cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHH----HHhhccc--------
Confidence 22 2334699999999999999999999999999999999999999975432211 11211 1111111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 002358 845 IGNVKIESIWRIAEVAIQCVEQRGFSRPKM 874 (931)
Q Consensus 845 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~ 874 (931)
.++......+.+++.+||+.+|++||++
T Consensus 411 --~~p~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 411 --TYPDKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp --CCCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred --CCCcccCHHHHHHHHHhccCCHhHCCCC
Confidence 1111223367899999999999999976
No 198
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.4e-37 Score=350.33 Aligned_cols=245 Identities=16% Similarity=0.156 Sum_probs=187.6
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCc---cchhhhhHHHHHH---HHHhcCCCCCccee-------EEEe
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVA---LLSRIHHRNLVPLI-------GYCE 675 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~---il~~l~HpnIv~l~-------g~~~ 675 (931)
.|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|++ ++++++|||||+++ +++.
T Consensus 74 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~ 153 (377)
T 3byv_A 74 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 153 (377)
T ss_dssp EEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEE
T ss_pred eEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhh
Confidence 3556789999999999999974 6999999998642 2345578999995 45555799999998 6665
Q ss_pred cCC-----------------eEEEEEEecCCCCHHHHhccCC----CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEe
Q 002358 676 EEH-----------------QRILVYEYMHNGTLRDRLHGSV----NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIH 734 (931)
Q Consensus 676 ~~~-----------------~~~lV~E~~~~gsL~~~L~~~~----~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH 734 (931)
..+ ..++||||+ +|+|.+++.... ....+++..++.++.||++||+|||+ .+|+|
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH 229 (377)
T 3byv_A 154 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVH 229 (377)
T ss_dssp CTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTEEC
T ss_pred ccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCeec
Confidence 543 278999999 689999987421 11234468888999999999999998 89999
Q ss_pred cCCCCCCccccCCCceEEecccccccccccccccccccccCCCccCCCccCCC-----------CCCccchhHHHHHHHH
Q 002358 735 RDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-----------QLTEKSDVYSFGVVLL 803 (931)
Q Consensus 735 ~DIkp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~-----------~~s~ksDVwSlGvlL~ 803 (931)
|||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++|
T Consensus 230 rDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ 304 (377)
T 3byv_A 230 TYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY 304 (377)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred CCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence 99999999999999999999999986433 2233457 999999999877 8999999999999999
Q ss_pred HHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH--HH
Q 002358 804 ELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL--AI 881 (931)
Q Consensus 804 eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~--~L 881 (931)
||++|+.||......... ..+.. . .... ...+.+++.+||+.||++||++.|+++ .+
T Consensus 305 elltg~~Pf~~~~~~~~~---------------~~~~~-~-~~~~----~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f 363 (377)
T 3byv_A 305 WIWCADLPITKDAALGGS---------------EWIFR-S-CKNI----PQPVRALLEGFLRYPKEDRLLPLQAMETPEY 363 (377)
T ss_dssp HHHHSSCCC------CCS---------------GGGGS-S-CCCC----CHHHHHHHHHHTCSSGGGCCCHHHHHTSHHH
T ss_pred HHHHCCCCCcccccccch---------------hhhhh-h-ccCC----CHHHHHHHHHHcCCCchhCCCHHHHhhChHH
Confidence 999999999733221110 00000 0 0122 236789999999999999999999985 44
Q ss_pred Hhh
Q 002358 882 QDS 884 (931)
Q Consensus 882 ~~~ 884 (931)
+++
T Consensus 364 ~~~ 366 (377)
T 3byv_A 364 EQL 366 (377)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 199
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.2e-35 Score=336.25 Aligned_cols=250 Identities=26% Similarity=0.373 Sum_probs=199.9
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc--------hhhhhHHHHHHHHHhc-CCCCCcceeEEEecCC
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 678 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~--------~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~ 678 (931)
..|++.+.||+|+||.||+|.++ +|+.||||++..... ...+.+.+|+.+++++ +||||+++++++....
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 45666789999999999999986 799999999865431 1235688999999999 7999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccc
Q 002358 679 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 758 (931)
Q Consensus 679 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla 758 (931)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~ 247 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFS 247 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEEecCcc
Confidence 99999999999999999873 3568999999999999999999998 89999999999999999999999999999
Q ss_pred ccccccccccccccccCCCccCCCccC------CCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhh
Q 002358 759 RQAEEDLTHISSVARGTVGYLDPEYYG------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 832 (931)
Q Consensus 759 ~~~~~~~~~~~~~~~gt~~y~APE~l~------~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~ 832 (931)
........ .....||+.|+|||++. ...++.++|||||||++|||++|+.||...... .... .+.
T Consensus 248 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~---~~~~----~i~ 318 (365)
T 2y7j_A 248 CHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI---LMLR----MIM 318 (365)
T ss_dssp EECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHH
T ss_pred cccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH---HHHH----HHH
Confidence 87654322 23356899999999885 346889999999999999999999999743221 1111 111
Q ss_pred cCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 833 KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 833 ~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.+... ...+. .... ...+.+++.+||+.||++||+++|+++
T Consensus 319 ~~~~~-~~~~~-~~~~----~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 319 EGQYQ-FSSPE-WDDR----SSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HTCCC-CCHHH-HSSS----CHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hCCCC-CCCcc-cccC----CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11110 00000 0111 235889999999999999999999985
No 200
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=4e-36 Score=327.70 Aligned_cols=251 Identities=21% Similarity=0.310 Sum_probs=184.9
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc-h-hhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-H-RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~-~-~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
..+++.+.||+|+||.||+|... +|+.||+|+++.... . ..+.+.++...++.++||||+++++++.+++..++|||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 86 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 86 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEE
T ss_pred HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEe
Confidence 45677899999999999999985 689999999876432 2 23344555556888899999999999999999999999
Q ss_pred ecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCC-CeEecCCCCCCccccCCCceEEecccccccccc
Q 002358 686 YMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 763 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~-~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~ 763 (931)
|++ |+|.+++.... ....+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++....
T Consensus 87 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 87 LMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp CCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred hhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 997 58877765321 34679999999999999999999998 6 999999999999999999999999999987544
Q ss_pred cccccccccccCCCccCCCcc----CCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeec
Q 002358 764 DLTHISSVARGTVGYLDPEYY----GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 839 (931)
Q Consensus 764 ~~~~~~~~~~gt~~y~APE~l----~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i 839 (931)
... .....||+.|+|||.+ .+..++.++||||+|+++|||++|+.||...... ...+ ......... ..
T Consensus 163 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~----~~~~~~~~~-~~ 234 (290)
T 3fme_A 163 DVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-FQQL----KQVVEEPSP-QL 234 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-HHHH----HHHHHSCCC-CC
T ss_pred ccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch-HHHH----HHHhccCCC-Cc
Confidence 322 2233589999999996 5667899999999999999999999999732221 1111 112221111 11
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 840 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 840 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
. .......+.+++.+||+.+|++|||++|+++
T Consensus 235 ~--------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 235 P--------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp C--------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred c--------cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 0 1112236789999999999999999999986
No 201
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=9.9e-36 Score=330.47 Aligned_cols=255 Identities=26% Similarity=0.366 Sum_probs=198.4
Q ss_pred hhHHHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc--------hhhhhHHHHHHHHHhcCCCCCcceeEEE
Q 002358 604 PELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIHHRNLVPLIGYC 674 (931)
Q Consensus 604 ~~l~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~--------~~~~~~~~E~~il~~l~HpnIv~l~g~~ 674 (931)
+......|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++
T Consensus 5 ~~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 84 (322)
T 2ycf_A 5 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF 84 (322)
T ss_dssp CHHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred hhhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEE
Confidence 3455678889999999999999999886 578999999865321 2234688999999999999999999998
Q ss_pred ecCCeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCc---eE
Q 002358 675 EEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AK 751 (931)
Q Consensus 675 ~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~---vk 751 (931)
..+. .++||||+++|+|.+.+.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++. +|
T Consensus 85 ~~~~-~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~k 157 (322)
T 2ycf_A 85 DAED-YYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIK 157 (322)
T ss_dssp ESSS-EEEEEECCTTEETHHHHST---TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEE
T ss_pred cCCc-eEEEEecCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEE
Confidence 7655 8999999999999999873 4578999999999999999999998 89999999999999987654 99
Q ss_pred EecccccccccccccccccccccCCCccCCCcc---CCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHH
Q 002358 752 VSDFGLSRQAEEDLTHISSVARGTVGYLDPEYY---GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWAR 828 (931)
Q Consensus 752 L~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l---~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~ 828 (931)
|+|||+++...... ......||+.|+|||++ ....++.++|||||||++|||++|+.||........ +...
T Consensus 158 l~Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~-- 231 (322)
T 2ycf_A 158 ITDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKDQ-- 231 (322)
T ss_dssp ECCCTTCEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC--HHHH--
T ss_pred EccCccceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH--HHHH--
Confidence 99999998754322 12234589999999986 356789999999999999999999999974332211 1111
Q ss_pred HhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 829 SMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 829 ~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
+..+.... .+..... ....+.+++.+||+.||++||+++|+++
T Consensus 232 --~~~~~~~~--~~~~~~~----~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 232 --ITSGKYNF--IPEVWAE----VSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp --HHHTCCCC--CHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --HHhCcccc--Cchhhhh----cCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 11111110 0111111 1236789999999999999999999984
No 202
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.1e-35 Score=325.74 Aligned_cols=258 Identities=21% Similarity=0.309 Sum_probs=197.2
Q ss_pred HhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc--hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEec
Q 002358 611 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 687 (931)
Q Consensus 611 ~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 687 (931)
|++.+.||+|+||.||+|+.+ +|+.||||+++.... ...+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (299)
T 2r3i_A 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84 (299)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEcc
Confidence 556789999999999999987 689999999865432 23467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccccc
Q 002358 688 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 767 (931)
Q Consensus 688 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~~ 767 (931)
+ |+|.+++... ....+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++.........
T Consensus 85 ~-~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 159 (299)
T 2r3i_A 85 H-QDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159 (299)
T ss_dssp S-EEHHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred c-CCHHHHHHhh-hccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc
Confidence 7 6999998754 23468899999999999999999998 89999999999999999999999999998765433221
Q ss_pred cccccccCCCccCCCccCCCC-CCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecc------
Q 002358 768 ISSVARGTVGYLDPEYYGNQQ-LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV------ 840 (931)
Q Consensus 768 ~~~~~~gt~~y~APE~l~~~~-~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~------ 840 (931)
.....||+.|+|||.+.+.. ++.++||||||+++|||++|+.||......+ .+.... +.. +...+..
T Consensus 160 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~-~~~--~~~~~~~~~~~~~ 233 (299)
T 2r3i_A 160 -YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID--QLFRIF-RTL--GTPDEVVWPGVTS 233 (299)
T ss_dssp -TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHH-HHH--CCCCTTTSTTGGG
T ss_pred -cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH--HHHHHH-HHh--CCCchhhhhHhhc
Confidence 22345899999999987765 7899999999999999999999997443221 111111 111 1000000
Q ss_pred ----cccccCC-------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 841 ----DPVLIGN-------VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 841 ----d~~l~~~-------~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.+..... ........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 234 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp STTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 00112246789999999999999999999875
No 203
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.2e-35 Score=324.38 Aligned_cols=249 Identities=24% Similarity=0.349 Sum_probs=195.6
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc----chhhhhHHHHHHHHHhcCCCCCcceeEEE--ecCCeEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC----SHRTQQFVTEVALLSRIHHRNLVPLIGYC--EEEHQRIL 682 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~----~~~~~~~~~E~~il~~l~HpnIv~l~g~~--~~~~~~~l 682 (931)
.|++.+.||+|+||.||+|... +++.||+|+++... ....+.+.+|++++++++||||+++++++ .+....++
T Consensus 6 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (305)
T 2wtk_C 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYM 85 (305)
T ss_dssp CBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEE
T ss_pred ceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEE
Confidence 4567899999999999999975 68899999987532 23456799999999999999999999998 44567899
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccc
Q 002358 683 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 762 (931)
Q Consensus 683 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~ 762 (931)
||||++++ |.+.+... ....+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++....
T Consensus 86 v~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 160 (305)
T 2wtk_C 86 VMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160 (305)
T ss_dssp EEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence 99999877 77776643 34578999999999999999999998 899999999999999999999999999998654
Q ss_pred ccc-cccccccccCCCccCCCccCCCC--CCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeec
Q 002358 763 EDL-THISSVARGTVGYLDPEYYGNQQ--LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 839 (931)
Q Consensus 763 ~~~-~~~~~~~~gt~~y~APE~l~~~~--~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i 839 (931)
... ........|++.|+|||++.+.. ++.++||||||+++|||++|+.||...... ...+ .+..+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~----~i~~~~~--- 230 (305)
T 2wtk_C 161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY---KLFE----NIGKGSY--- 230 (305)
T ss_dssp TTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHH----HHHHCCC---
T ss_pred ccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH---HHHH----HHhcCCC---
Confidence 322 12223445899999999987643 477999999999999999999999743321 1111 1222211
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002358 840 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 880 (931)
Q Consensus 840 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 880 (931)
.+.... ...+.+++.+||+.||++||+++|+++.
T Consensus 231 ---~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 ---AIPGDC----GPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ---CCCSSS----CHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ---CCCCcc----CHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111122 2367899999999999999999999863
No 204
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.9e-36 Score=332.24 Aligned_cols=257 Identities=24% Similarity=0.342 Sum_probs=183.6
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEe
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
..|++.+.||+|+||.||+|... +++.||||++.... ....+++.+|++++++++||||+++++++...+..++||||
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 94 (303)
T 2vwi_A 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKL 94 (303)
T ss_dssp CCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEEC
T ss_pred hhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehh
Confidence 44667899999999999999865 68999999986532 33456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccC-----CCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccc
Q 002358 687 MHNGTLRDRLHGS-----VNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 761 (931)
Q Consensus 687 ~~~gsL~~~L~~~-----~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~ 761 (931)
+++++|.+++... .....+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++...
T Consensus 95 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 171 (303)
T 2vwi_A 95 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFL 171 (303)
T ss_dssp CTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred ccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence 9999999988631 124568999999999999999999998 89999999999999999999999999998765
Q ss_pred ccccc----ccccccccCCCccCCCccCC-CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCe
Q 002358 762 EEDLT----HISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 836 (931)
Q Consensus 762 ~~~~~----~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 836 (931)
..... .......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||........ ... ... +..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~---~~~-~~~ 244 (303)
T 2vwi_A 172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV---LML---TLQ-NDP 244 (303)
T ss_dssp C---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH---HHH---HHT-SSC
T ss_pred ccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH---HHH---Hhc-cCC
Confidence 43211 11233468999999999865 5689999999999999999999999974332211 111 111 111
Q ss_pred ee----cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 837 IS----IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 837 ~~----i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.. ..++.....++ ..+.+++.+||+.||++||+++|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 245 PSLETGVQDKEMLKKYG----KSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CCTTC-----CCCCCCC----HHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred Cccccccccchhhhhhh----HHHHHHHHHHccCChhhCcCHHHHhh
Confidence 11 11111222222 36789999999999999999999985
No 205
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=8.1e-36 Score=350.65 Aligned_cols=251 Identities=27% Similarity=0.366 Sum_probs=201.3
Q ss_pred HHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEE
Q 002358 607 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 683 (931)
Q Consensus 607 ~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV 683 (931)
....|++.+.||+|+||+||+|..+ +++.||||++.... ......+.+|++++++++||||+++++++.+....++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3567888999999999999999986 68999999986432 23456789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCcccc---CCCceEEeccccccc
Q 002358 684 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD---INMRAKVSDFGLSRQ 760 (931)
Q Consensus 684 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld---~~~~vkL~DFGla~~ 760 (931)
|||+++|+|.+.+.. ...+++..+..++.|++.||.|||+ .+|+||||||+|||++ .++.+||+|||+++.
T Consensus 100 ~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 100 GELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp ECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 999999999998874 3568999999999999999999998 8999999999999995 456799999999986
Q ss_pred ccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecc
Q 002358 761 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 840 (931)
Q Consensus 761 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~ 840 (931)
...... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .... .+..+....
T Consensus 174 ~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~----~i~~~~~~~-- 241 (486)
T 3mwu_A 174 FQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY---DILK----RVETGKYAF-- 241 (486)
T ss_dssp BCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHTCCCS--
T ss_pred CCCCCc--cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHH----HHHhCCCCC--
Confidence 543321 233468999999999876 5899999999999999999999999743321 1111 111221110
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 841 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 841 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
+..... .....+.+++.+||+.+|++|||++|+++
T Consensus 242 ~~~~~~----~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 242 DLPQWR----TISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp CSGGGG----GSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCcccC----CCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 000001 12236789999999999999999999986
No 206
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=6.2e-36 Score=363.15 Aligned_cols=261 Identities=25% Similarity=0.399 Sum_probs=207.0
Q ss_pred HHHHHHhhccccCccCcEEEEEEEECC----CcEEEEEEccCccc-hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeE
Q 002358 606 LEEATNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 680 (931)
Q Consensus 606 l~~~~~~~~~~LG~G~fG~Vy~a~~~~----g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~ 680 (931)
+....+++.+.||+|+||.||+|.+.. +..||+|+++.... ...+.+.+|+.++++++||||+++++++.+ +..
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~ 465 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPV 465 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-Cce
Confidence 344567778999999999999998753 46799999876433 344679999999999999999999999854 568
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccc
Q 002358 681 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 760 (931)
Q Consensus 681 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~ 760 (931)
++||||+++|+|.+++... ...+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 466 ~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~~ 540 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 540 (656)
T ss_dssp EEEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred EEEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCee
Confidence 9999999999999999753 3468999999999999999999998 8999999999999999999999999999987
Q ss_pred ccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCeeec
Q 002358 761 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISI 839 (931)
Q Consensus 761 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i 839 (931)
.............+|+.|+|||.+.+..++.++||||||+++|||++ |..||...... .....+ ..+....
T Consensus 541 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~---~~~~~i----~~~~~~~- 612 (656)
T 2j0j_A 541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---DVIGRI----ENGERLP- 612 (656)
T ss_dssp CCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHHHH----HHTCCCC-
T ss_pred cCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHH----HcCCCCC-
Confidence 65443333334457889999999988899999999999999999997 99999743321 122211 1111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 840 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 840 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
. +......+.+++.+||+.||++||++.||++.|+++...+
T Consensus 613 ----~----~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 613 ----M----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp ----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----C----CccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 1 1122346889999999999999999999999999987654
No 207
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.6e-36 Score=342.32 Aligned_cols=251 Identities=10% Similarity=0.035 Sum_probs=178.9
Q ss_pred HhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc---hhhhhHHHHHHHHHhc--CCCCCccee-------EEEecC
Q 002358 611 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRI--HHRNLVPLI-------GYCEEE 677 (931)
Q Consensus 611 ~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~il~~l--~HpnIv~l~-------g~~~~~ 677 (931)
|.+.+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+.+++.+ +||||++++ +++...
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~ 143 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQ 143 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEET
T ss_pred eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecC
Confidence 556789999999999999976 789999999986432 3445678886555555 599988755 444332
Q ss_pred -----------------CeEEEEEEecCCCCHHHHhccCCCCCCCCHHHH------HHHHHHHHHHhHHhhhcCCCCeEe
Q 002358 678 -----------------HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTR------LQIAHDAAKGLEYLHTGCNPGIIH 734 (931)
Q Consensus 678 -----------------~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~------~~i~~qia~aL~yLH~~~~~~ivH 734 (931)
...++||||++ |+|.+++... ...+++..+ ..++.||++||+|||+ .+|+|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~ivH 217 (371)
T 3q60_A 144 SQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL--DFVYVFRGDEGILALHILTAQLIRLAANLQS---KGLVH 217 (371)
T ss_dssp TSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH--HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TTEEE
T ss_pred CCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh--ccccchhhhhhhhhHHHHHHHHHHHHHHHHH---CCCcc
Confidence 34799999998 8999999753 223455555 7788999999999998 89999
Q ss_pred cCCCCCCccccCCCceEEecccccccccccccccccccccCCCccCCCccCC--CCCCccchhHHHHHHHHHHHhCCCCC
Q 002358 735 RDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPV 812 (931)
Q Consensus 735 ~DIkp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~--~~~s~ksDVwSlGvlL~eLltG~~Pf 812 (931)
|||||+|||++.++.+||+|||+++....... ...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP----ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCEEE----GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCCcc----CccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999986543221 3346799999999987 78999999999999999999999999
Q ss_pred CccCccchhhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 813 SVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 813 ~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
........... ..............-.........+.+++.+||+.||++|||++|+++
T Consensus 294 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 294 GLVTPGIKGSW--------KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TBCCTTCTTCC--------CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCcCcccccch--------hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 74432211000 000000000000000001122347889999999999999999999974
No 208
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=5.9e-36 Score=342.29 Aligned_cols=258 Identities=23% Similarity=0.278 Sum_probs=191.9
Q ss_pred HHhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCC------eEEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH------QRILV 683 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~------~~~lV 683 (931)
.|++.+.||+|+||.||+|++.++..||+|++.... +...+|+++++.++||||+++++++.... ..++|
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 467789999999999999999887789999876432 22347999999999999999999985543 37899
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCcccc-CCCceEEeccccccccc
Q 002358 684 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAKVSDFGLSRQAE 762 (931)
Q Consensus 684 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld-~~~~vkL~DFGla~~~~ 762 (931)
|||++++.+............+++..+..++.|+++||+|||+ .+|+||||||+|||++ .++.+||+|||+++...
T Consensus 117 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 117 LEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp EECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 9999876444433222235678999999999999999999998 8999999999999999 79999999999998754
Q ss_pred ccccccccccccCCCccCCCccCCC-CCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhh---------
Q 002358 763 EDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK--------- 832 (931)
Q Consensus 763 ~~~~~~~~~~~gt~~y~APE~l~~~-~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~--------- 832 (931)
.... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||...+..+. +...++ ...
T Consensus 194 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--l~~i~~-~~g~p~~~~~~~ 268 (394)
T 4e7w_A 194 AGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ--LVEIIK-VLGTPSREQIKT 268 (394)
T ss_dssp TTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHH-HHCCCCHHHHHH
T ss_pred CCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHH-HhCCCCHHHHHh
Confidence 3322 2234589999999998664 689999999999999999999999975443221 111111 100
Q ss_pred ------cCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 833 ------KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 833 ------~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
......+....+....+......+.+++.+||+.||++|||+.|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 00000000000000011112346889999999999999999999975
No 209
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=9.2e-36 Score=331.67 Aligned_cols=264 Identities=22% Similarity=0.296 Sum_probs=203.0
Q ss_pred HHHHHHhhccccCccCcEEEEEEEE-C-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCC------CcceeEEEecC
Q 002358 606 LEEATNNFCKKIGKGSFGSVYYGKM-K-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN------LVPLIGYCEEE 677 (931)
Q Consensus 606 l~~~~~~~~~~LG~G~fG~Vy~a~~-~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~Hpn------Iv~l~g~~~~~ 677 (931)
+....|++.+.||+|+||.||+|.. + +++.||||+++.. ....+.+.+|+++++.++|++ ++++++++...
T Consensus 11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~ 89 (339)
T 1z57_A 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH 89 (339)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence 3345677889999999999999987 3 6889999998754 334567889999999997654 99999999999
Q ss_pred CeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccC-----------
Q 002358 678 HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI----------- 746 (931)
Q Consensus 678 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~----------- 746 (931)
+..++||||+ +++|.+++... ....+++..+..++.|+++||+|||+ .+|+||||||+|||++.
T Consensus 90 ~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 90 GHICIVFELL-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp TEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC---
T ss_pred CcEEEEEcCC-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCcc
Confidence 9999999999 89999998754 23468899999999999999999998 89999999999999987
Q ss_pred --------CCceEEecccccccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCcc
Q 002358 747 --------NMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFG 818 (931)
Q Consensus 747 --------~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~ 818 (931)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+..
T Consensus 165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 240 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240 (339)
T ss_dssp -CEEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH
T ss_pred ccccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 668999999999764432 22346899999999999999999999999999999999999999754432
Q ss_pred chhhHHHHHHHh-----hhcCCeeec---------------------cccc-ccCCCCHHHHHHHHHHHHHccccCCCCC
Q 002358 819 AELNIVHWARSM-----IKKGDVISI---------------------VDPV-LIGNVKIESIWRIAEVAIQCVEQRGFSR 871 (931)
Q Consensus 819 ~~~~l~~~~~~~-----~~~~~~~~i---------------------~d~~-l~~~~~~~~~~~l~~li~~Cl~~dP~~R 871 (931)
+........... ......... ..+. -...........+.+++.+||+.||++|
T Consensus 241 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 320 (339)
T 1z57_A 241 EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKR 320 (339)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccc
Confidence 222111111000 000000000 0000 0001123455678999999999999999
Q ss_pred CCHHHHHH
Q 002358 872 PKMQEIVL 879 (931)
Q Consensus 872 Ps~~evl~ 879 (931)
||++|+++
T Consensus 321 pt~~ell~ 328 (339)
T 1z57_A 321 ITLREALK 328 (339)
T ss_dssp CCHHHHTT
T ss_pred cCHHHHhc
Confidence 99999874
No 210
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.3e-35 Score=348.61 Aligned_cols=252 Identities=27% Similarity=0.383 Sum_probs=204.5
Q ss_pred HHHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc---chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEE
Q 002358 606 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 681 (931)
Q Consensus 606 l~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~ 681 (931)
+....|++.+.||+|+||.||+|..+ +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 102 (484)
T 3nyv_A 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY 102 (484)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 44567888999999999999999987 78999999986432 234567999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccc---cCCCceEEeccccc
Q 002358 682 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLS 758 (931)
Q Consensus 682 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILl---d~~~~vkL~DFGla 758 (931)
+||||+.+|+|.+.+.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|||++
T Consensus 103 lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 103 LVGEVYTGGELFDEIIS---RKRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp EEECCCCSCBHHHHHHT---CSCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 99999999999999873 4579999999999999999999998 899999999999999 56789999999999
Q ss_pred ccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeee
Q 002358 759 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 838 (931)
Q Consensus 759 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 838 (931)
+....... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .... .+..+....
T Consensus 177 ~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~----~i~~~~~~~ 246 (484)
T 3nyv_A 177 THFEASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY---DILK----KVEKGKYTF 246 (484)
T ss_dssp HHBCCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHCCCCC
T ss_pred EEcccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH---HHHH----HHHcCCCCC
Confidence 86544322 223458999999999876 6899999999999999999999999743321 1222 122222110
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 839 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 839 i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
. .+ ... .....+.+++.+||+.+|++|||++|+++
T Consensus 247 ~-~~-~~~----~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 247 E-LP-QWK----KVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp C-SG-GGG----GSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred C-Cc-ccc----cCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 0 00 001 12236789999999999999999999985
No 211
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1e-35 Score=362.27 Aligned_cols=246 Identities=25% Similarity=0.343 Sum_probs=201.5
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc---chhhhhHHHHHHHHHhc-CCCCCcceeEEEecCCeEEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILV 683 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~~~~lV 683 (931)
..+++.+.||+|+||.||+|+.+ +++.||||+++... ....+.+..|..++..+ +||+|+++++++.+.+..++|
T Consensus 341 ~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV 420 (674)
T 3pfq_A 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 420 (674)
T ss_dssp TTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEE
T ss_pred cceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEE
Confidence 34667899999999999999987 58899999987532 23446688899999988 799999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccc
Q 002358 684 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 763 (931)
Q Consensus 684 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~ 763 (931)
|||+++|+|.+++.. ...+++..++.++.||+.||+|||+ .+|+||||||+||||+.++.+||+|||+++....
T Consensus 421 ~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 421 MEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EeCcCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 999999999999984 3568999999999999999999998 8999999999999999999999999999986433
Q ss_pred cccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccccc
Q 002358 764 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 843 (931)
Q Consensus 764 ~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~ 843 (931)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .+.+ .+..+..
T Consensus 495 ~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~---~~~~----~i~~~~~------- 559 (674)
T 3pfq_A 495 DGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED---ELFQ----SIMEHNV------- 559 (674)
T ss_dssp TTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHSSCC-------
T ss_pred CCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH---HHHH----HHHhCCC-------
Confidence 222 233456999999999999999999999999999999999999999744321 1111 1212111
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCH-----HHHH
Q 002358 844 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKM-----QEIV 878 (931)
Q Consensus 844 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~-----~evl 878 (931)
.++......+.+++.+||+.||++||++ +||+
T Consensus 560 ---~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~ 596 (674)
T 3pfq_A 560 ---AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK 596 (674)
T ss_dssp ---CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHH
T ss_pred ---CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHh
Confidence 1112223467899999999999999997 5655
No 212
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.3e-36 Score=341.26 Aligned_cols=258 Identities=21% Similarity=0.223 Sum_probs=192.8
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEec-----------
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----------- 676 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~----------- 676 (931)
..|++.+.||+|+||.||+|... +|+.||||++.... +...+|+++++.++||||+++++++..
T Consensus 7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 82 (383)
T 3eb0_A 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP 82 (383)
T ss_dssp TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence 35667899999999999999875 78999999986542 233479999999999999999999843
Q ss_pred ---------------------------CCeEEEEEEecCCCCHHHHhccC-CCCCCCCHHHHHHHHHHHHHHhHHhhhcC
Q 002358 677 ---------------------------EHQRILVYEYMHNGTLRDRLHGS-VNQKPLDWLTRLQIAHDAAKGLEYLHTGC 728 (931)
Q Consensus 677 ---------------------------~~~~~lV~E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~ 728 (931)
....++||||++ |+|.+.+... .....+++..+..++.|+++||+|||+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-- 159 (383)
T 3eb0_A 83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS-- 159 (383)
T ss_dssp ---------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT--
T ss_pred ccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH--
Confidence 334789999998 5877766532 135679999999999999999999998
Q ss_pred CCCeEecCCCCCCcccc-CCCceEEecccccccccccccccccccccCCCccCCCccCCC-CCCccchhHHHHHHHHHHH
Q 002358 729 NPGIIHRDVKSSNILLD-INMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELI 806 (931)
Q Consensus 729 ~~~ivH~DIkp~NILld-~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~-~~s~ksDVwSlGvlL~eLl 806 (931)
.+|+||||||+|||++ .++.+||+|||+++....... .....||+.|+|||.+.+. .++.++||||+||++|||+
T Consensus 160 -~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 236 (383)
T 3eb0_A 160 -LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI 236 (383)
T ss_dssp -TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred -CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHH
Confidence 8999999999999998 689999999999987544322 2234589999999998764 5899999999999999999
Q ss_pred hCCCCCCccCccchhhHHHHHHHhhhcC---------------CeeecccccccCCCCHHHHHHHHHHHHHccccCCCCC
Q 002358 807 SGKKPVSVEDFGAELNIVHWARSMIKKG---------------DVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSR 871 (931)
Q Consensus 807 tG~~Pf~~~~~~~~~~l~~~~~~~~~~~---------------~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~R 871 (931)
+|+.||......+. +...+ +..... ..............+......+.+++.+||+.+|++|
T Consensus 237 ~g~~pf~~~~~~~~--~~~i~-~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (383)
T 3eb0_A 237 LGKPLFSGETSIDQ--LVRII-QIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLR 313 (383)
T ss_dssp HSSCSSCCSSHHHH--HHHHH-HHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGS
T ss_pred hCCCCCCCCChHHH--HHHHH-HHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhC
Confidence 99999975433221 11111 111000 0000000000001122233468899999999999999
Q ss_pred CCHHHHHH
Q 002358 872 PKMQEIVL 879 (931)
Q Consensus 872 Ps~~evl~ 879 (931)
||+.|+++
T Consensus 314 ~t~~e~l~ 321 (383)
T 3eb0_A 314 INPYEAMA 321 (383)
T ss_dssp CCHHHHHT
T ss_pred CCHHHHhc
Confidence 99999984
No 213
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=6.7e-36 Score=330.72 Aligned_cols=258 Identities=24% Similarity=0.386 Sum_probs=198.1
Q ss_pred HHHHhhccccCccCcEEEEEEEECCCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
...+++.+.||+|+||.||+|.+++ .+|+|+++... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 3446678999999999999999864 49999986532 2334668899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
|+++++|.+++... ...+++..+..++.|+++||+|||+ .+++||||||+|||++ ++.+||+|||+++......
T Consensus 110 ~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~ 183 (319)
T 2y4i_B 110 LCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ 183 (319)
T ss_dssp CCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred cccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence 99999999999752 3468999999999999999999998 8999999999999998 6799999999987643211
Q ss_pred ----cccccccccCCCccCCCccCC---------CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhh
Q 002358 766 ----THISSVARGTVGYLDPEYYGN---------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 832 (931)
Q Consensus 766 ----~~~~~~~~gt~~y~APE~l~~---------~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~ 832 (931)
........|++.|+|||.+.. ..++.++||||||+++|||++|+.||...... .... .+.
T Consensus 184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~----~~~ 256 (319)
T 2y4i_B 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE---AIIW----QMG 256 (319)
T ss_dssp ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH---HHHH----HHH
T ss_pred ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHH----Hhc
Confidence 112223458999999999864 45788999999999999999999999743321 1111 111
Q ss_pred cCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 002358 833 KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 888 (931)
Q Consensus 833 ~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 888 (931)
.+........ .. ...+.+++.+||+.+|++||+++|+++.|+++....
T Consensus 257 ~~~~~~~~~~----~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 257 TGMKPNLSQI----GM----GKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp TTCCCCCCCS----SC----CTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred cCCCCCCCcC----CC----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 2211111111 11 125789999999999999999999999999987654
No 214
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.9e-35 Score=331.72 Aligned_cols=259 Identities=21% Similarity=0.293 Sum_probs=198.2
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc-hhhhhHHHHHHHHHhcCCCCCcceeEEEecC-----CeEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-----HQRIL 682 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~-----~~~~l 682 (931)
.|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++... ...++
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i 107 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence 4667899999999999999876 688999999975433 3447789999999999999999999999654 46899
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccc
Q 002358 683 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 762 (931)
Q Consensus 683 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~ 762 (931)
||||++ |+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 108 v~e~~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 108 VQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEECCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEcccC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 999997 599998873 458999999999999999999998 899999999999999999999999999998765
Q ss_pred cccccc--ccccccCCCccCCCccC-CCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCee--
Q 002358 763 EDLTHI--SSVARGTVGYLDPEYYG-NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI-- 837 (931)
Q Consensus 763 ~~~~~~--~~~~~gt~~y~APE~l~-~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~-- 837 (931)
...... .....||+.|+|||++. ...++.++|||||||++|||++|+.||......+.... +..........
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~---i~~~~~~~~~~~~ 256 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH---ILGILGSPSQEDL 256 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHH---HHHHHCSCCHHHH
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHH---HHHHhCCCCHHHH
Confidence 432221 23446899999999864 45689999999999999999999999975443322211 11111000000
Q ss_pred -------------eccccccc--CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 838 -------------SIVDPVLI--GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 838 -------------~i~d~~l~--~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
....+... ..........+.+++.+||+.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000000 0000111236789999999999999999999975
No 215
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.8e-35 Score=328.40 Aligned_cols=260 Identities=22% Similarity=0.278 Sum_probs=198.2
Q ss_pred HHhhccccCccCcEEEEEEEEC--CCcEEEEEEccCccc--hhhhhHHHHHHHHHhc---CCCCCcceeEEEe-----cC
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK--DGKEVAVKIMADSCS--HRTQQFVTEVALLSRI---HHRNLVPLIGYCE-----EE 677 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~--~g~~vAvK~~~~~~~--~~~~~~~~E~~il~~l---~HpnIv~l~g~~~-----~~ 677 (931)
.|++.+.||+|+||.||+|... +|+.||+|+++.... .....+.+|+.+++.+ +||||+++++++. ..
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 91 (326)
T 1blx_A 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 91 (326)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSE
T ss_pred ceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCC
Confidence 4667899999999999999983 688999999865332 2234677888888777 7999999999987 56
Q ss_pred CeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccc
Q 002358 678 HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGL 757 (931)
Q Consensus 678 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGl 757 (931)
...++||||++ |+|.+++... ....+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 92 ~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 92 TKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp EEEEEEEECCS-CBHHHHHHHS-CTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred ceEEEEEecCC-CCHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEecCcc
Confidence 67899999997 6999998754 23458999999999999999999998 8999999999999999999999999999
Q ss_pred cccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcC---
Q 002358 758 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG--- 834 (931)
Q Consensus 758 a~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~--- 834 (931)
++...... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||....... ....+.......
T Consensus 167 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 167 ARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QLGKILDVIGLPGEE 241 (326)
T ss_dssp CCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCGG
T ss_pred cccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH---HHHHHHHHcCCCCcc
Confidence 98654332 2233468999999999999999999999999999999999999997443221 111111111100
Q ss_pred Ceee-------ccc---ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 835 DVIS-------IVD---PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 835 ~~~~-------i~d---~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.... ... ..............+.+++.+||+.||++||+++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000 000 00000111122346789999999999999999999984
No 216
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3.7e-35 Score=321.44 Aligned_cols=250 Identities=24% Similarity=0.397 Sum_probs=191.7
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEec-----------
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----------- 676 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~----------- 676 (931)
..|++.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 45677899999999999999976 7899999998643 3445778999999999999999999998754
Q ss_pred --CCeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEec
Q 002358 677 --EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSD 754 (931)
Q Consensus 677 --~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~D 754 (931)
....++||||+++|+|.+++... ...+++..++.++.|+++||+|||+ .+++||||||+|||++.++.+||+|
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEee
Confidence 45688999999999999999752 3467888999999999999999998 8999999999999999999999999
Q ss_pred ccccccccccc-------------cccccccccCCCccCCCccCCC-CCCccchhHHHHHHHHHHHhCCCCCCccCccch
Q 002358 755 FGLSRQAEEDL-------------THISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE 820 (931)
Q Consensus 755 FGla~~~~~~~-------------~~~~~~~~gt~~y~APE~l~~~-~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~ 820 (931)
||++....... ........|++.|+|||.+.+. .++.++||||||+++|||++ ||... ...
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~--~~~ 234 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG--MER 234 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH--HHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc--hhH
Confidence 99998654321 1112234589999999998764 78999999999999999998 55411 111
Q ss_pred hhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 821 LNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 821 ~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
...... +.... ..+....+......+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~----~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 235 VNILKK----LRSVS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHH----HHSTT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHh----ccccc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 111111 11111 11112223333456789999999999999999999985
No 217
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=6.1e-36 Score=337.64 Aligned_cols=260 Identities=22% Similarity=0.278 Sum_probs=190.9
Q ss_pred HHHhhccccCccCcEEEEEEEECCCcEEEEEEccCccch-----------hhhhHHHHHHHHHhcCCCCCcceeEEEec-
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSH-----------RTQQFVTEVALLSRIHHRNLVPLIGYCEE- 676 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~-----------~~~~~~~E~~il~~l~HpnIv~l~g~~~~- 676 (931)
..|++.+.||+|+||.||+|...+|+.||||++...... ..+.+.+|++++++++||||+++++++..
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 101 (362)
T 3pg1_A 22 SPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHF 101 (362)
T ss_dssp CSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEEC
T ss_pred cceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEec
Confidence 455668899999999999999988999999998643221 13678999999999999999999999843
Q ss_pred ----CCeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEE
Q 002358 677 ----EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKV 752 (931)
Q Consensus 677 ----~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL 752 (931)
....++||||++ |+|.+.+.. ....+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||
T Consensus 102 ~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl 175 (362)
T 3pg1_A 102 EEPAMHKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITI 175 (362)
T ss_dssp CTTTCCEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEE
T ss_pred cCCCcceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHEEEcCCCCEEE
Confidence 346899999997 688888874 34568999999999999999999998 89999999999999999999999
Q ss_pred ecccccccccccccccccccccCCCccCCCccCC-CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhh
Q 002358 753 SDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMI 831 (931)
Q Consensus 753 ~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~ 831 (931)
+|||+++....... .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||........ ...+....
T Consensus 176 ~Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~ 250 (362)
T 3pg1_A 176 CDFNLAREDTADAN--KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ---LNKIVEVV 250 (362)
T ss_dssp CCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHH
T ss_pred EecCcccccccccc--cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHc
Confidence 99999975433222 233458999999999876 6789999999999999999999999975432211 11111111
Q ss_pred hcCCeee-----------ccccccc-------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 832 KKGDVIS-----------IVDPVLI-------GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 832 ~~~~~~~-----------i~d~~l~-------~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
....... .+...+. ..........+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 251 GTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp CCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 1000000 0000000 0001112236889999999999999999999975
No 218
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=328.77 Aligned_cols=259 Identities=21% Similarity=0.292 Sum_probs=190.7
Q ss_pred HHhhccccCccCcEEEEEEEECC-CcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEe-------------
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCE------------- 675 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~~-g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~------------- 675 (931)
.|++.+.||+|+||.||+|.... ++.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 91 (320)
T 2i6l_A 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSL 91 (320)
T ss_dssp TEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----C
T ss_pred ceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccc
Confidence 45667899999999999999874 8999999987665566788999999999999999999999873
Q ss_pred -cCCeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCcccc-CCCceEEe
Q 002358 676 -EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAKVS 753 (931)
Q Consensus 676 -~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld-~~~~vkL~ 753 (931)
+....++||||++ |+|.+++. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++ +++.+||+
T Consensus 92 ~~~~~~~lv~e~~~-~~L~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 92 TELNSVYIVQEYME-TDLANVLE----QGPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp CSCSEEEEEEECCS-EEHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccCceeEEeeccC-CCHHHHhh----cCCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEEc
Confidence 3467899999997 69999986 3468899999999999999999998 8999999999999997 56799999
Q ss_pred cccccccccccccc--cccccccCCCccCCCccCC-CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHh
Q 002358 754 DFGLSRQAEEDLTH--ISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM 830 (931)
Q Consensus 754 DFGla~~~~~~~~~--~~~~~~gt~~y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~ 830 (931)
|||+++........ ......++..|+|||.+.. ..++.++||||||+++|||++|+.||......... ..+...
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~~~~~~ 240 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQM---QLILES 240 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHHHH
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHh
Confidence 99999876432211 1223457899999998755 67899999999999999999999999744322111 111100
Q ss_pred hhc----------CCeeeccccccc-C-----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 831 IKK----------GDVISIVDPVLI-G-----NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 831 ~~~----------~~~~~i~d~~l~-~-----~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
... ......+..... . .........+.+++.+||+.||++||+++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 000 000000000000 0 000112346889999999999999999999975
No 219
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3e-35 Score=347.43 Aligned_cols=249 Identities=27% Similarity=0.388 Sum_probs=198.1
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc-------------hhhhhHHHHHHHHHhcCCCCCcceeEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-------------HRTQQFVTEVALLSRIHHRNLVPLIGYC 674 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~-------------~~~~~~~~E~~il~~l~HpnIv~l~g~~ 674 (931)
..|.+.++||+|+||.||+|..+ +++.||+|++..... ...+.+.+|++++++++||||+++++++
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 45777899999999999999987 578999999865321 2246789999999999999999999999
Q ss_pred ecCCeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCC---ceE
Q 002358 675 EEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM---RAK 751 (931)
Q Consensus 675 ~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~---~vk 751 (931)
.+....++||||+++|+|.+.+.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++ .+|
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EcCCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCccEE
Confidence 999999999999999999998874 3568999999999999999999998 8999999999999998776 699
Q ss_pred EecccccccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhh
Q 002358 752 VSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMI 831 (931)
Q Consensus 752 L~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~ 831 (931)
|+|||+++....... .....||+.|+|||++.+ .++.++||||+||++|+|++|..||...... .+.. .+
T Consensus 190 l~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~----~i 259 (504)
T 3q5i_A 190 IVDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ---DIIK----KV 259 (504)
T ss_dssp ECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HH
T ss_pred EEECCCCEEcCCCCc--cccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHH----HH
Confidence 999999987654322 233469999999999874 6899999999999999999999999743322 1111 12
Q ss_pred hcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 832 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 832 ~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
..+.... +....... ...+.+++.+||+.||++|||++|+++
T Consensus 260 ~~~~~~~--~~~~~~~~----s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 260 EKGKYYF--DFNDWKNI----SDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHCCCCC--CHHHHTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HcCCCCC--CccccCCC----CHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 2222110 00001111 236789999999999999999999975
No 220
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.6e-35 Score=340.72 Aligned_cols=199 Identities=26% Similarity=0.326 Sum_probs=171.8
Q ss_pred HHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhc------CCCCCcceeEEEecCCeE
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI------HHRNLVPLIGYCEEEHQR 680 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l------~HpnIv~l~g~~~~~~~~ 680 (931)
...|++.+.||+|+||.||+|... +++.||||+++.. ....+.+.+|+++++.+ +|+||+++++++......
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 345777899999999999999876 5899999999754 33346778899988887 467999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCc--eEEeccccc
Q 002358 681 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR--AKVSDFGLS 758 (931)
Q Consensus 681 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~--vkL~DFGla 758 (931)
++||||+. ++|.+++... ....+++..+..++.||++||+|||+ .+|+||||||+|||++.++. +||+|||++
T Consensus 175 ~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKN-KFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp EEEECCCC-CBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEEeccC-CCHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeecccc
Confidence 99999996 6999988754 23458999999999999999999998 89999999999999999887 999999999
Q ss_pred ccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccC
Q 002358 759 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVED 816 (931)
Q Consensus 759 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~ 816 (931)
+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 250 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 250 CYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp EETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 764332 223468999999999999999999999999999999999999997544
No 221
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.5e-35 Score=331.44 Aligned_cols=252 Identities=21% Similarity=0.331 Sum_probs=195.8
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc-chhhhhHHHHHHH-HHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVAL-LSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~i-l~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
..+++.+.||+|+||.||+|... +|+.||||+++... .....++..|..+ ++.++||||+++++++...+..++|||
T Consensus 51 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 130 (340)
T 3an0_A 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 130 (340)
T ss_dssp SCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEEC
T ss_pred hheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHH
Confidence 34566789999999999999975 68999999997643 3344556666665 777899999999999999999999999
Q ss_pred ecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccccc
Q 002358 686 YMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 764 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~ 764 (931)
|+++ +|.+++.... ....+++..+..++.||++||+|||+ ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus 131 ~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~--~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 207 (340)
T 3an0_A 131 LMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS 207 (340)
T ss_dssp CCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH
T ss_pred HhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh--cCCeecCCCCHHHEEECCCCCEEEeeCCCceecccc
Confidence 9975 9988876321 34678999999999999999999997 139999999999999999999999999999865432
Q ss_pred ccccccccccCCCccCCCccC----CCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecc
Q 002358 765 LTHISSVARGTVGYLDPEYYG----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 840 (931)
Q Consensus 765 ~~~~~~~~~gt~~y~APE~l~----~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~ 840 (931)
.. .....||+.|+|||++. ...++.++|||||||++|||++|+.||...... . ..+...+..... ...
T Consensus 208 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~--~---~~~~~~~~~~~~-~~~ 279 (340)
T 3an0_A 208 VA--KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP--F---QQLKQVVEEPSP-QLP 279 (340)
T ss_dssp HH--HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH--H---HHHHHHHHSCCC-CCC
T ss_pred cc--cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch--H---HHHHHHhcCCCC-CCC
Confidence 21 22345899999999964 447899999999999999999999999732211 1 111222221111 110
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 841 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 841 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.......+.+++.+||+.+|++||+++|+++
T Consensus 280 --------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 280 --------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp --------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --------cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 0112346889999999999999999999986
No 222
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-35 Score=327.24 Aligned_cols=249 Identities=24% Similarity=0.406 Sum_probs=192.4
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhc-CCCCCcceeEEEec------CCeEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEE------EHQRI 681 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~------~~~~~ 681 (931)
.|++.+.||+|+||.||+|.+. +++.||||++.... ...+.+.+|+.+++++ +||||+++++++.. ....+
T Consensus 25 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~ 103 (326)
T 2x7f_A 25 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 103 (326)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEE
T ss_pred cEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEE
Confidence 4567899999999999999985 68999999986542 3456789999999999 79999999999876 46789
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccc
Q 002358 682 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 761 (931)
Q Consensus 682 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~ 761 (931)
+||||+++|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++...
T Consensus 104 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 179 (326)
T 2x7f_A 104 LVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179 (326)
T ss_dssp EEEECCTTEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCTTTC--
T ss_pred EEEEcCCCCcHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEEeeCcCceec
Confidence 999999999999999754 23568899999999999999999998 89999999999999999999999999998865
Q ss_pred cccccccccccccCCCccCCCccC-----CCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCe
Q 002358 762 EEDLTHISSVARGTVGYLDPEYYG-----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 836 (931)
Q Consensus 762 ~~~~~~~~~~~~gt~~y~APE~l~-----~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 836 (931)
..... ......|++.|+|||.+. +..++.++||||||+++|||++|+.||....... ... . +.....
T Consensus 180 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~---~-~~~~~~ 251 (326)
T 2x7f_A 180 DRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR---ALF---L-IPRNPA 251 (326)
T ss_dssp ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH---HHH---H-HHHSCC
T ss_pred CcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH---HHH---H-hhcCcc
Confidence 43222 122345899999999986 5678899999999999999999999996332211 111 1 111111
Q ss_pred eecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 837 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 837 ~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
..... ..+ ...+.+++.+||+.+|++||+++|+++
T Consensus 252 ~~~~~----~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 252 PRLKS----KKW----SKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp CCCSC----SCS----CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccCCc----ccc----CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 11111 111 236889999999999999999999986
No 223
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.8e-35 Score=322.54 Aligned_cols=249 Identities=26% Similarity=0.321 Sum_probs=199.7
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc---------chhhhhHHHHHHHHHhcC-CCCCcceeEEEecCC
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---------SHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEH 678 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~---------~~~~~~~~~E~~il~~l~-HpnIv~l~g~~~~~~ 678 (931)
.|++.+.||+|+||.||+|..+ +|+.||||++.... ....+.+.+|++++++++ ||||+++++++....
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (298)
T 1phk_A 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT 97 (298)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred ccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC
Confidence 4566889999999999999986 68999999986532 122456889999999996 999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccc
Q 002358 679 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 758 (931)
Q Consensus 679 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla 758 (931)
..++||||+++++|.+++.. ...+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 98 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 98 FFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp EEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEecccch
Confidence 99999999999999999974 3568999999999999999999998 89999999999999999999999999999
Q ss_pred ccccccccccccccccCCCccCCCccC------CCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhh
Q 002358 759 RQAEEDLTHISSVARGTVGYLDPEYYG------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 832 (931)
Q Consensus 759 ~~~~~~~~~~~~~~~gt~~y~APE~l~------~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~ 832 (931)
........ .....|++.|+|||++. ...++.++||||||+++|||++|+.||...... .... .+.
T Consensus 172 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~----~~~ 242 (298)
T 1phk_A 172 CQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM---LMLR----MIM 242 (298)
T ss_dssp EECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHH
T ss_pred hhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH---HHHH----HHh
Confidence 87543322 22345899999999874 557889999999999999999999999743221 1111 111
Q ss_pred cCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 833 KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 833 ~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.+... ...+. .......+.+++.+||+.+|++||+++|+++
T Consensus 243 ~~~~~-~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 243 SGNYQ-FGSPE-----WDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HTCCC-CCTTT-----GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cCCcc-cCccc-----ccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 11111 00010 0122346889999999999999999999875
No 224
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=4.1e-35 Score=332.51 Aligned_cols=259 Identities=23% Similarity=0.289 Sum_probs=189.5
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecCC------eE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH------QR 680 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~------~~ 680 (931)
.|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.+++.++||||+++++++.... ..
T Consensus 26 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 105 (371)
T 2xrw_A 26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDV 105 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEE
T ss_pred heeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccce
Confidence 4667899999999999999876 68899999987532 234567889999999999999999999997654 78
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccc
Q 002358 681 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 760 (931)
Q Consensus 681 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~ 760 (931)
++||||++ |+|.+.+. ..+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 106 ~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 106 YIVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEECCS-EEHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred EEEEEcCC-CCHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 99999997 57888875 247889999999999999999998 8999999999999999999999999999986
Q ss_pred ccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHH----------------
Q 002358 761 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIV---------------- 824 (931)
Q Consensus 761 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~---------------- 824 (931)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.......+
T Consensus 177 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 254 (371)
T 2xrw_A 177 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 254 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSC
T ss_pred ccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence 54322 123346899999999999999999999999999999999999999754322111000
Q ss_pred HHHHHhhhcCC------eeecccccccCCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 825 HWARSMIKKGD------VISIVDPVLIGNV---KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 825 ~~~~~~~~~~~------~~~i~d~~l~~~~---~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
..+........ ............. .......+.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 00000000000 0000000000000 1122457889999999999999999999986
No 225
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=6.1e-36 Score=345.08 Aligned_cols=258 Identities=24% Similarity=0.271 Sum_probs=190.8
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecC------CeEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE------HQRIL 682 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~------~~~~l 682 (931)
.|++.+.||+|+||.||+|++. +|+.||||++.... +.+.+|+++|++++||||+++++++... ...++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 4666889999999999999986 58999999986532 2345799999999999999999988532 23679
Q ss_pred EEEecCCCCHHHHhccC-CCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCC-CceEEeccccccc
Q 002358 683 VYEYMHNGTLRDRLHGS-VNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN-MRAKVSDFGLSRQ 760 (931)
Q Consensus 683 V~E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~-~~vkL~DFGla~~ 760 (931)
||||+++ +|.+.+... .....+++..+..++.||++||+|||+ .+|+||||||+|||++.+ +.+||+|||+++.
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 9999975 565554421 135678999999999999999999998 899999999999999965 5689999999987
Q ss_pred ccccccccccccccCCCccCCCccCCC-CCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHh-------hh
Q 002358 761 AEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM-------IK 832 (931)
Q Consensus 761 ~~~~~~~~~~~~~gt~~y~APE~l~~~-~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~-------~~ 832 (931)
...... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+ .+.+.++.. +.
T Consensus 207 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~--~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 207 LVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD--QLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp CCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCSCCHHHHH
T ss_pred cccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHH
Confidence 543322 2234689999999998764 78999999999999999999999997543221 121111100 00
Q ss_pred --cCCeeecccccccC-----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 833 --KGDVISIVDPVLIG-----NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 833 --~~~~~~i~d~~l~~-----~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.....+..-+.+.. .++......+.+++.+||+.||++||++.|+++
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 00111111111100 011122346889999999999999999999975
No 226
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1e-35 Score=336.90 Aligned_cols=255 Identities=22% Similarity=0.306 Sum_probs=180.9
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecC------Ce
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE------HQ 679 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~------~~ 679 (931)
..|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 35667899999999999999875 68999999986532 23456788999999999999999999998654 56
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccc
Q 002358 680 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 759 (931)
Q Consensus 680 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~ 759 (931)
.++|+|++ +++|.+++.. ..+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 109 ~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred EEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 79999999 7899888763 468999999999999999999998 899999999999999999999999999998
Q ss_pred cccccccccccccccCCCccCCCccCC-CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeee
Q 002358 760 QAEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 838 (931)
Q Consensus 760 ~~~~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 838 (931)
..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+..+.. ..+.+.+... ..+
T Consensus 181 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l---~~i~~~~g~p-~~~ 252 (367)
T 2fst_X 181 HTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL---KLILRLVGTP-GAE 252 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCSC-CHH
T ss_pred ccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHhCCC-CHH
Confidence 65432 223468999999999877 68899999999999999999999999754432211 1111111100 000
Q ss_pred cccc-----------ccc--CCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 839 IVDP-----------VLI--GNVK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 839 i~d~-----------~l~--~~~~-----~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.+.. .+. ...+ ......+.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 0000 000 0000 011235789999999999999999999875
No 227
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.5e-35 Score=330.46 Aligned_cols=258 Identities=22% Similarity=0.313 Sum_probs=202.0
Q ss_pred HHHhhccccCccCcEEEEEEEECCCcEEEEEEccCccchh-----------------hhhHHHHHHHHHhcCCCCCccee
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHR-----------------TQQFVTEVALLSRIHHRNLVPLI 671 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~-----------------~~~~~~E~~il~~l~HpnIv~l~ 671 (931)
..|++.+.||+|+||.||+|.. +|+.||+|++....... .+.+.+|++++++++||||++++
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 3566789999999999999999 89999999986432111 17899999999999999999999
Q ss_pred EEEecCCeEEEEEEecCCCCHHHH------hccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCcccc
Q 002358 672 GYCEEEHQRILVYEYMHNGTLRDR------LHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD 745 (931)
Q Consensus 672 g~~~~~~~~~lV~E~~~~gsL~~~------L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld 745 (931)
+++.+.+..++||||+++|+|.++ +... ....+++..+..++.|+++||+|||+ ..+++||||||+||+++
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMD 186 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEEC
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEc
Confidence 999999999999999999999998 5432 25679999999999999999999996 37999999999999999
Q ss_pred CCCceEEecccccccccccccccccccccCCCccCCCccCCC-CCCc-cchhHHHHHHHHHHHhCCCCCCccCccchhhH
Q 002358 746 INMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTE-KSDVYSFGVVLLELISGKKPVSVEDFGAELNI 823 (931)
Q Consensus 746 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~-~~s~-ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l 823 (931)
.++.+||+|||++...... ......|++.|+|||.+.+. .++. ++||||||+++|||++|+.||...... ...
T Consensus 187 ~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~ 261 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL--VEL 261 (348)
T ss_dssp TTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--HHH
T ss_pred CCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHH
Confidence 9999999999999875433 22344689999999999877 6666 999999999999999999999743321 122
Q ss_pred HHHHHHhhhcCCeeeccc------cccc---CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 824 VHWARSMIKKGDVISIVD------PVLI---GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~i~d------~~l~---~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.+. +..+......+ +... ..........+.+++.+||+.||++||+++|+++
T Consensus 262 ~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 262 FNN----IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHH----HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHH----HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 221 11221110000 0000 0000122346889999999999999999999985
No 228
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.4e-35 Score=335.49 Aligned_cols=201 Identities=24% Similarity=0.379 Sum_probs=154.5
Q ss_pred HHhh-ccccCccCcEEEEEEEEC---CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEe--cCCeEEEE
Q 002358 610 TNNF-CKKIGKGSFGSVYYGKMK---DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCE--EEHQRILV 683 (931)
Q Consensus 610 ~~~~-~~~LG~G~fG~Vy~a~~~---~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~~~lV 683 (931)
.|++ .++||+|+||.||+|+++ +++.||||++.... ..+.+.+|+++|++++||||+++++++. .....++|
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 3444 568999999999999976 47899999997542 2346889999999999999999999994 46789999
Q ss_pred EEecCCCCHHHHhccCC------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccc----cCCCceEEe
Q 002358 684 YEYMHNGTLRDRLHGSV------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL----DINMRAKVS 753 (931)
Q Consensus 684 ~E~~~~gsL~~~L~~~~------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILl----d~~~~vkL~ 753 (931)
|||++ |+|.+.+.... ....+++..++.++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+
T Consensus 99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 99996 57877765211 22358999999999999999999998 899999999999999 678899999
Q ss_pred ccccccccccccc--ccccccccCCCccCCCccCC-CCCCccchhHHHHHHHHHHHhCCCCCCccC
Q 002358 754 DFGLSRQAEEDLT--HISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVED 816 (931)
Q Consensus 754 DFGla~~~~~~~~--~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~ 816 (931)
|||+++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 9999987654321 22234568999999999877 458999999999999999999999997443
No 229
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=6e-35 Score=322.70 Aligned_cols=251 Identities=22% Similarity=0.311 Sum_probs=194.1
Q ss_pred HHHHHhhccccCccCcEEEEEEEECCCcEEEEEEccCcc--chhhhhHHHHHHHHHhcC--CCCCcceeEEEecCCeEEE
Q 002358 607 EEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIH--HRNLVPLIGYCEEEHQRIL 682 (931)
Q Consensus 607 ~~~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~--HpnIv~l~g~~~~~~~~~l 682 (931)
....|++.+.||+|+||.||++...+++.||||++.... ....+.+.+|++++++++ ||||+++++++......++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 334567789999999999999999889999999986432 334578899999999997 5999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccc
Q 002358 683 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 762 (931)
Q Consensus 683 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~ 762 (931)
||| +.+++|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||+++ +.+||+|||+++...
T Consensus 106 v~e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 106 VME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ 177 (313)
T ss_dssp EEC-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEEEECCCSSSCC--
T ss_pred EEe-cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeEEEeecccccccc
Confidence 999 668999999984 3578999999999999999999998 89999999999999964 899999999998764
Q ss_pred ccccc-cccccccCCCccCCCccCC-----------CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHh
Q 002358 763 EDLTH-ISSVARGTVGYLDPEYYGN-----------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM 830 (931)
Q Consensus 763 ~~~~~-~~~~~~gt~~y~APE~l~~-----------~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~ 830 (931)
..... ......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||..... .. ......
T Consensus 178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~~----~~~~~~ 252 (313)
T 3cek_A 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QI----SKLHAI 252 (313)
T ss_dssp ------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-HH----HHHHHH
T ss_pred CccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-HH----HHHHHH
Confidence 43221 2233468999999999865 4788899999999999999999999963221 11 111111
Q ss_pred hhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 831 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 831 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
...... ...+......+.+++.+||+.+|++||+++|+++
T Consensus 253 ~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 253 IDPNHE---------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp HCTTSC---------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred Hhcccc---------cCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 211111 1111111246889999999999999999999985
No 230
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.4e-35 Score=334.17 Aligned_cols=263 Identities=19% Similarity=0.245 Sum_probs=185.1
Q ss_pred HHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEecCCe------
Q 002358 607 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ------ 679 (931)
Q Consensus 607 ~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~------ 679 (931)
.-..|++.+.||+|+||.||+|++. +|+.||||++.... .....+.+|++.+..++||||+++++++.....
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 99 (360)
T 3e3p_A 21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDI 99 (360)
T ss_dssp HHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCE
T ss_pred hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccce
Confidence 3445667899999999999999986 68999999886542 233466788888999999999999999865433
Q ss_pred -EEEEEEecCCCCHHHHhcc-CCCCCCCCHHHHHHHHHHHHHHhHHhh--hcCCCCeEecCCCCCCccccC-CCceEEec
Q 002358 680 -RILVYEYMHNGTLRDRLHG-SVNQKPLDWLTRLQIAHDAAKGLEYLH--TGCNPGIIHRDVKSSNILLDI-NMRAKVSD 754 (931)
Q Consensus 680 -~~lV~E~~~~gsL~~~L~~-~~~~~~l~~~~~~~i~~qia~aL~yLH--~~~~~~ivH~DIkp~NILld~-~~~vkL~D 754 (931)
.++||||+++ +|.+.+.. ......+++..+..++.|++.||.||| + .+|+||||||+|||++. ++.+||+|
T Consensus 100 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~~~kl~D 175 (360)
T 3e3p_A 100 YLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADGTLKLCD 175 (360)
T ss_dssp EEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTTEEEECC
T ss_pred eEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCCcEEEee
Confidence 7899999986 44443321 224567889999999999999999999 6 89999999999999996 89999999
Q ss_pred ccccccccccccccccccccCCCccCCCccCCC-CCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhc
Q 002358 755 FGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 833 (931)
Q Consensus 755 FGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~-~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~ 833 (931)
||+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...+..... .. +.+....
T Consensus 176 fg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~--~~-~~~~~~~ 250 (360)
T 3e3p_A 176 FGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQL--HE-IVRVLGC 250 (360)
T ss_dssp CTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HH-HHHHHCC
T ss_pred CCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHH--HH-HHHHcCC
Confidence 999987654332 2234589999999998654 4899999999999999999999999754332211 11 1111100
Q ss_pred C------------Ceeeccc------ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 834 G------------DVISIVD------PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 834 ~------------~~~~i~d------~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
. ......+ ..............+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 251 PSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp CCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 0 0000000 00001112223457899999999999999999999875
No 231
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.2e-34 Score=330.05 Aligned_cols=200 Identities=28% Similarity=0.309 Sum_probs=170.1
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcC-CC-----CCcceeEEEecCCeEE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HR-----NLVPLIGYCEEEHQRI 681 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-Hp-----nIv~l~g~~~~~~~~~ 681 (931)
..|++.+.||+|+||.||+|... +++.||||+++.. ....+++.+|+++++.++ |+ +|+++++++...+..+
T Consensus 54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 132 (382)
T 2vx3_A 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC 132 (382)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence 45777899999999999999876 6889999999753 234567788999999885 55 4999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCcccc--CCCceEEecccccc
Q 002358 682 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD--INMRAKVSDFGLSR 759 (931)
Q Consensus 682 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld--~~~~vkL~DFGla~ 759 (931)
+||||+. |+|.+++... ....+++..+..++.|++.||.|||+. +.+|+||||||+|||++ .++.+||+|||+++
T Consensus 133 lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 133 LVFEMLS-YNLYDLLRNT-NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEEECCC-CBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEecCC-CCHHHHHhhc-CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 9999996 5999998754 234589999999999999999999942 27999999999999995 47889999999998
Q ss_pred cccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccC
Q 002358 760 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVED 816 (931)
Q Consensus 760 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~ 816 (931)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 210 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 210 QLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 76432 223468999999999999999999999999999999999999997543
No 232
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=8.3e-35 Score=329.25 Aligned_cols=262 Identities=21% Similarity=0.317 Sum_probs=198.6
Q ss_pred HHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcC-----------CCCCcceeEEEe
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-----------HRNLVPLIGYCE 675 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-----------HpnIv~l~g~~~ 675 (931)
...|.+.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 346778899999999999999975 6899999998753 334567889999999886 899999999987
Q ss_pred cCC----eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCC-CeEecCCCCCCcccc-----
Q 002358 676 EEH----QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLD----- 745 (931)
Q Consensus 676 ~~~----~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~-~ivH~DIkp~NILld----- 745 (931)
... ..++|||++ +++|.+++... ....+++..+..++.||+.||+|||+ . +|+||||||+|||++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKY-EHRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHh-hccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCC
Confidence 654 789999999 89999998754 23458999999999999999999998 6 999999999999995
Q ss_pred -CCCceEEecccccccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccch---h
Q 002358 746 -INMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE---L 821 (931)
Q Consensus 746 -~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~---~ 821 (931)
..+.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TTEEEEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred cCcceEEEcccccccccCCCC----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 34479999999998664332 234589999999999999999999999999999999999999974432211 1
Q ss_pred hHHHHHHHhhhc--------C----------Ceee-ccccc-------c--cCCCCHHHHHHHHHHHHHccccCCCCCCC
Q 002358 822 NIVHWARSMIKK--------G----------DVIS-IVDPV-------L--IGNVKIESIWRIAEVAIQCVEQRGFSRPK 873 (931)
Q Consensus 822 ~l~~~~~~~~~~--------~----------~~~~-i~d~~-------l--~~~~~~~~~~~l~~li~~Cl~~dP~~RPs 873 (931)
.....+...+.. + .... +.... + ....+......+.+++.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 111111111100 0 0000 00000 0 01234566778999999999999999999
Q ss_pred HHHHHH
Q 002358 874 MQEIVL 879 (931)
Q Consensus 874 ~~evl~ 879 (931)
++|+++
T Consensus 328 ~~ell~ 333 (373)
T 1q8y_A 328 AGGLVN 333 (373)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 999986
No 233
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=4.8e-35 Score=328.27 Aligned_cols=263 Identities=19% Similarity=0.265 Sum_probs=200.8
Q ss_pred hhHHHHHHhhccccCccCcEEEEEEEEC-CC-cEEEEEEccCccchhhhhHHHHHHHHHhcCCCC------CcceeEEEe
Q 002358 604 PELEEATNNFCKKIGKGSFGSVYYGKMK-DG-KEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN------LVPLIGYCE 675 (931)
Q Consensus 604 ~~l~~~~~~~~~~LG~G~fG~Vy~a~~~-~g-~~vAvK~~~~~~~~~~~~~~~E~~il~~l~Hpn------Iv~l~g~~~ 675 (931)
++.....|++.+.||+|+||.||+|... ++ +.||+|+++.. ....+.+.+|++++++++|++ ++.+++++.
T Consensus 14 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 92 (355)
T 2eu9_A 14 GDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN 92 (355)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE
T ss_pred CceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee
Confidence 3344556788899999999999999875 34 68999999753 334567889999999998765 899999999
Q ss_pred cCCeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccc-----------
Q 002358 676 EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL----------- 744 (931)
Q Consensus 676 ~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILl----------- 744 (931)
..+..++||||+ +++|.+.+... ....+++..+..++.||++||+|||+ .+|+||||||+|||+
T Consensus 93 ~~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~ 167 (355)
T 2eu9_A 93 FHGHMCIAFELL-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNE 167 (355)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECC
T ss_pred eCCeEEEEEecc-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecccccccccc
Confidence 999999999999 66777776643 23568999999999999999999998 899999999999999
Q ss_pred --------cCCCceEEecccccccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccC
Q 002358 745 --------DINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVED 816 (931)
Q Consensus 745 --------d~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~ 816 (931)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 243 (355)
T 2eu9_A 168 HKSCEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE 243 (355)
T ss_dssp C-CCCEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence 66889999999999764332 223468999999999999999999999999999999999999997443
Q ss_pred ccchhhHHHHHHHhhhc--------CCeeecc-c-------------------ccc--cCCCCHHHHHHHHHHHHHcccc
Q 002358 817 FGAELNIVHWARSMIKK--------GDVISIV-D-------------------PVL--IGNVKIESIWRIAEVAIQCVEQ 866 (931)
Q Consensus 817 ~~~~~~l~~~~~~~~~~--------~~~~~i~-d-------------------~~l--~~~~~~~~~~~l~~li~~Cl~~ 866 (931)
....... +...... ....... . +.+ ...........+.+++.+||+.
T Consensus 244 ~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 320 (355)
T 2eu9_A 244 NREHLVM---MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEF 320 (355)
T ss_dssp HHHHHHH---HHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCS
T ss_pred HHHHHHH---HHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcC
Confidence 3221111 1111100 0000000 0 000 0011223445788999999999
Q ss_pred CCCCCCCHHHHHH
Q 002358 867 RGFSRPKMQEIVL 879 (931)
Q Consensus 867 dP~~RPs~~evl~ 879 (931)
||++|||++|+++
T Consensus 321 dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 321 DPAQRITLAEALL 333 (355)
T ss_dssp STTTSCCHHHHTT
T ss_pred ChhhCcCHHHHhc
Confidence 9999999999874
No 234
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.8e-35 Score=330.68 Aligned_cols=258 Identities=21% Similarity=0.252 Sum_probs=195.4
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc-hhhhhHHHHHHHHHhcCCCCCcceeEEEecC-----CeEEE
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-----HQRIL 682 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~-----~~~~l 682 (931)
.|++.+.||+|+||.||+|.+. +|+.||||++..... .....+.+|++++++++||||+++++++... ...++
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 91 (353)
T 2b9h_A 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYI 91 (353)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEE
T ss_pred ceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEE
Confidence 4567889999999999999987 689999999975432 3456788999999999999999999988654 67899
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccc
Q 002358 683 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 762 (931)
Q Consensus 683 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~ 762 (931)
||||+. |+|.+.+.. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 92 v~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 92 IQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 999997 689998874 468999999999999999999998 899999999999999999999999999998754
Q ss_pred ccccc---------cccccccCCCccCCCccC-CCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhh
Q 002358 763 EDLTH---------ISSVARGTVGYLDPEYYG-NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 832 (931)
Q Consensus 763 ~~~~~---------~~~~~~gt~~y~APE~l~-~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~ 832 (931)
..... ......||+.|+|||++. +..++.++|||||||++|||++|+.||...+...... .+.....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~ 240 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL---LIFGIIG 240 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH---HHHHHHC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH---HHHHHhC
Confidence 32211 112245899999999875 4788999999999999999999999997544321111 1111110
Q ss_pred cCC----eee--------cc-------cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 833 KGD----VIS--------IV-------DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 833 ~~~----~~~--------i~-------d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
... ... .+ ...+. .........+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLE-KMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHH-HHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCchhccccccccchhhHHhhcccCCCCcchh-hhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000 000 00 00000 000112346789999999999999999999875
No 235
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.6e-34 Score=315.29 Aligned_cols=254 Identities=27% Similarity=0.365 Sum_probs=202.8
Q ss_pred hhHHHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeE
Q 002358 604 PELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 680 (931)
Q Consensus 604 ~~l~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~ 680 (931)
.......|++.+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|++++++++||||+++++++.+....
T Consensus 17 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (287)
T 2wei_A 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96 (287)
T ss_dssp THHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeE
Confidence 3455678888999999999999999986 68999999986532 23456789999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCC---CceEEecccc
Q 002358 681 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN---MRAKVSDFGL 757 (931)
Q Consensus 681 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~---~~vkL~DFGl 757 (931)
++||||+++++|.+.+.. ...+++..+..++.|+++||+|||+ .+++||||||+||+++.+ +.+||+|||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~ 170 (287)
T 2wei_A 97 YIVGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGL 170 (287)
T ss_dssp EEEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTG
T ss_pred EEEEEccCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCc
Confidence 999999999999998863 3468999999999999999999998 899999999999999754 4699999999
Q ss_pred cccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCee
Q 002358 758 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 837 (931)
Q Consensus 758 a~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~ 837 (931)
+........ .....|++.|+|||.+.+. ++.++||||||+++|+|++|+.||...... .... .+..+...
T Consensus 171 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~----~~~~~~~~ 240 (287)
T 2wei_A 171 STCFQQNTK--MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEY---DILK----RVETGKYA 240 (287)
T ss_dssp GGTBCCCSS--CSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHCCCC
T ss_pred ceeecCCCc--cccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHH---HHHH----HHHcCCCC
Confidence 986543322 1223478999999998764 899999999999999999999999743221 1111 12222211
Q ss_pred ecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 838 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 838 ~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
. +....... ...+.+++.+||+.+|++|||++|+++
T Consensus 241 ~--~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 241 F--DLPQWRTI----SDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp C--CSGGGTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred C--Cchhhhhc----CHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 0 00001112 236789999999999999999999986
No 236
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=8.8e-35 Score=329.81 Aligned_cols=254 Identities=22% Similarity=0.303 Sum_probs=193.0
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeE-----
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR----- 680 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~----- 680 (931)
..|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.+++.++||||+++++++......
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 35667889999999999999876 68999999997643 23357789999999999999999999999877654
Q ss_pred -EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccc
Q 002358 681 -ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 759 (931)
Q Consensus 681 -~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~ 759 (931)
++||||+. ++|.+.+. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 122 ~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp CEEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred EEEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 99999997 68888774 348999999999999999999998 899999999999999999999999999998
Q ss_pred cccccccccccccccCCCccCCCccCC-CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeee
Q 002358 760 QAEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 838 (931)
Q Consensus 760 ~~~~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 838 (931)
..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...+..+.. ..+....... ..+
T Consensus 193 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~---~~i~~~~~~~-~~~ 264 (371)
T 4exu_A 193 HADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQL---TQILKVTGVP-GTE 264 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCCC-CHH
T ss_pred ccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHHHhCCC-cHH
Confidence 65432 223458999999999877 78899999999999999999999999754322111 1111100000 000
Q ss_pred cc---------------cccccCC---CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 839 IV---------------DPVLIGN---VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 839 i~---------------d~~l~~~---~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.. ....... ........+.+++.+||+.||++|||++|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 265 FVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 00 0000000 00112346889999999999999999999875
No 237
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=6.6e-35 Score=328.26 Aligned_cols=253 Identities=21% Similarity=0.298 Sum_probs=192.4
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCe------E
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ------R 680 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~------~ 680 (931)
.|.+.+.||+|+||.||+|.++ +|+.||||++.... ....+.+.+|+.++++++||||+++++++..... .
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 104 (353)
T 3coi_A 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 104 (353)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred eEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeE
Confidence 4566789999999999999986 68999999986542 2335678999999999999999999999987654 4
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccc
Q 002358 681 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 760 (931)
Q Consensus 681 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~ 760 (931)
++||||+. |+|.+.+. ..+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 105 ~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 105 YLVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp EEEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred EEEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 99999997 68877764 248999999999999999999998 8999999999999999999999999999986
Q ss_pred ccccccccccccccCCCccCCCccCC-CCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcC-----
Q 002358 761 AEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG----- 834 (931)
Q Consensus 761 ~~~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~----- 834 (931)
.... .....||+.|+|||.+.+ ..++.++||||||+++|||++|+.||...+..+. ...+.......
T Consensus 176 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~ 248 (353)
T 3coi_A 176 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ---LTQILKVTGVPGTEFV 248 (353)
T ss_dssp ------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH---HHHHHHHHCBCCHHHH
T ss_pred CCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHH
Confidence 5432 223458999999999877 6789999999999999999999999975433211 11111110000
Q ss_pred -------------CeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 835 -------------DVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 835 -------------~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.......+.+ ..........+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 249 QKLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp TTCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000000000 0111223347889999999999999999999875
No 238
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=6.1e-35 Score=324.69 Aligned_cols=253 Identities=26% Similarity=0.345 Sum_probs=176.3
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc-hhhhhHHHHHH-HHHhcCCCCCcceeEEEecCCeEEEEEEe
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVA-LLSRIHHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~-il~~l~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
.+++.+.||+|+||.||+|..+ +|+.||||+++.... ....++..|+. +++.++||||+++++++...+..++||||
T Consensus 23 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~ 102 (327)
T 3aln_A 23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMEL 102 (327)
T ss_dssp SEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred HhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEee
Confidence 3556789999999999999986 689999999976432 33455666666 67778999999999999999999999999
Q ss_pred cCCCCHHHHhccC--CCCCCCCHHHHHHHHHHHHHHhHHhhhcCCC-CeEecCCCCCCccccCCCceEEecccccccccc
Q 002358 687 MHNGTLRDRLHGS--VNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 763 (931)
Q Consensus 687 ~~~gsL~~~L~~~--~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~-~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~ 763 (931)
+++ +|.+.+... .....+++..+..++.|+++||.|||+ . +|+||||||+|||++.++.+||+|||+++....
T Consensus 103 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 103 MST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred cCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 985 787776521 124668999999999999999999998 6 999999999999999999999999999987644
Q ss_pred cccccccccccCCCccCCCcc----CCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeec
Q 002358 764 DLTHISSVARGTVGYLDPEYY----GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 839 (931)
Q Consensus 764 ~~~~~~~~~~gt~~y~APE~l----~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i 839 (931)
... .....||+.|+|||.+ .+..++.++||||||+++|||++|+.||...... .+...... .+..
T Consensus 179 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~-~~~~--- 247 (327)
T 3aln_A 179 SIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-----FDQLTQVV-KGDP--- 247 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCCC-CSCC---
T ss_pred ccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH-----HHHHHHHh-cCCC---
Confidence 322 2223589999999998 4567899999999999999999999999732211 01111111 1111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 840 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 840 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
+.+...........+.+++.+||+.||++||+++|+++
T Consensus 248 --~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 248 --PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp --CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11111111122346889999999999999999999975
No 239
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.7e-34 Score=334.35 Aligned_cols=247 Identities=25% Similarity=0.357 Sum_probs=184.4
Q ss_pred ccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhc-CCCCCcceeEEEecCCeEEEEEEecCCCCH
Q 002358 614 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYMHNGTL 692 (931)
Q Consensus 614 ~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~~~~lV~E~~~~gsL 692 (931)
.+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+.+..++||||+. |+|
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 5789999999998777778999999998643 235678899999987 89999999999999999999999995 699
Q ss_pred HHHhccCCCCC----CCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCC-------------CceEEecc
Q 002358 693 RDRLHGSVNQK----PLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN-------------MRAKVSDF 755 (931)
Q Consensus 693 ~~~L~~~~~~~----~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~-------------~~vkL~DF 755 (931)
.+++....... ...+..++.++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 99997542111 11233457899999999999998 899999999999999754 48999999
Q ss_pred cccccccccccc---cccccccCCCccCCCccCC-------CCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHH
Q 002358 756 GLSRQAEEDLTH---ISSVARGTVGYLDPEYYGN-------QQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIV 824 (931)
Q Consensus 756 Gla~~~~~~~~~---~~~~~~gt~~y~APE~l~~-------~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~ 824 (931)
|+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||..... ...++
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~-~~~~i- 250 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS-RESNI- 250 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT-HHHHH-
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh-hHHHH-
Confidence 999876543222 1223469999999999865 678999999999999999999 9999963221 11111
Q ss_pred HHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 825 HWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 825 ~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
..... .. +......+......+.+++.+||+.||++||++.|+++
T Consensus 251 --~~~~~---~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 251 --IRGIF---SL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp --HHTCC---CC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --hcCCC---Cc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 11110 00 01111123445567899999999999999999999985
No 240
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.2e-34 Score=321.98 Aligned_cols=250 Identities=20% Similarity=0.291 Sum_probs=169.9
Q ss_pred HHhhc-cccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCCcceeEEEec----CCeEEEE
Q 002358 610 TNNFC-KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----EHQRILV 683 (931)
Q Consensus 610 ~~~~~-~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~----~~~~~lV 683 (931)
.|.+. +.||+|+||.||+|.++ +|+.||||++.... +...+....++.++||||+++++++.. ....++|
T Consensus 29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 104 (336)
T 3fhr_A 29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLII 104 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEE
Confidence 45553 46999999999999987 68999999986531 122223334566799999999999876 4558999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccC---CCceEEeccccccc
Q 002358 684 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQ 760 (931)
Q Consensus 684 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~---~~~vkL~DFGla~~ 760 (931)
|||+++|+|.+++... ....+++..++.++.|+++||+|||+ .+|+||||||+|||++. ++.+||+|||+++.
T Consensus 105 ~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~ 180 (336)
T 3fhr_A 105 MECMEGGELFSRIQER-GDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 180 (336)
T ss_dssp EECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EeccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEecccccee
Confidence 9999999999999854 23579999999999999999999998 89999999999999976 45599999999976
Q ss_pred ccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecc
Q 002358 761 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 840 (931)
Q Consensus 761 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~ 840 (931)
..... .....||+.|+|||++.+..++.++||||||+++|||++|+.||......... ......+..+.. ...
T Consensus 181 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~-~~~ 253 (336)
T 3fhr_A 181 TTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS---PGMKRRIRLGQY-GFP 253 (336)
T ss_dssp C-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------CCC
T ss_pred ccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh---hhHHHhhhcccc-ccC
Confidence 54322 22345899999999999999999999999999999999999999633321110 000111111100 000
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 841 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 841 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.+ . .......+.+++.+||+.||++|||++|+++
T Consensus 254 ~~-~----~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 254 NP-E----WSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp TT-T----STTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ch-h----hccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 0 1122346889999999999999999999987
No 241
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.7e-35 Score=321.99 Aligned_cols=244 Identities=26% Similarity=0.421 Sum_probs=189.8
Q ss_pred hhHHHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc------hhhhhHHHHHHHHHhc----CCCCCcceeE
Q 002358 604 PELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS------HRTQQFVTEVALLSRI----HHRNLVPLIG 672 (931)
Q Consensus 604 ~~l~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~------~~~~~~~~E~~il~~l----~HpnIv~l~g 672 (931)
.+.....|++.+.||+|+||.||+|... +++.||||++..... .....+.+|+.++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 3455677888999999999999999875 688999999965432 2334567899999999 8999999999
Q ss_pred EEecCCeEEEEEEe-cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCcccc-CCCce
Q 002358 673 YCEEEHQRILVYEY-MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRA 750 (931)
Q Consensus 673 ~~~~~~~~~lV~E~-~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld-~~~~v 750 (931)
++...+..++|+|+ +.+++|.+++.. ...+++..++.++.|+++||+|||+ .+|+||||||+||+++ .++.+
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITE---KGPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTEE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCeE
Confidence 99999999999999 789999999974 3468999999999999999999998 8999999999999999 88999
Q ss_pred EEecccccccccccccccccccccCCCccCCCccCCCCCC-ccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHH
Q 002358 751 KVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLT-EKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS 829 (931)
Q Consensus 751 kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s-~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~ 829 (931)
||+|||+++...... .....|++.|+|||++.+..+. .++||||||+++|||++|+.||.... ..
T Consensus 180 kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~------ 245 (312)
T 2iwi_A 180 KLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-----EI------ 245 (312)
T ss_dssp EECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HH------
T ss_pred EEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-----HH------
Confidence 999999998764432 2234589999999998766654 58999999999999999999996211 10
Q ss_pred hhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 830 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 830 ~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.. ... .+ +......+.+++.+||+.+|++||+++|+++
T Consensus 246 -~~-~~~------~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 246 -LE-AEL------HF----PAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -HH-TCC------CC----CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -hh-hcc------CC----cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 100 01 1112236789999999999999999999986
No 242
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4.5e-34 Score=315.70 Aligned_cols=249 Identities=23% Similarity=0.335 Sum_probs=177.7
Q ss_pred HHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccch-h-hhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEEe
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH-R-TQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 686 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~-~-~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E~ 686 (931)
.|++.+.||+|+||.||+|.++ +|+.||||++...... . .+.+.++..+++.++||||+++++++.+.+..++||||
T Consensus 26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 105 (318)
T 2dyl_A 26 DLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMEL 105 (318)
T ss_dssp GEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC
T ss_pred cccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEec
Confidence 4567789999999999999986 6899999998754322 2 23445555678888999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCC-CeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 687 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 687 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~-~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
+ ++.+...... ....+++..+..++.|+++||+|||+ . +++||||||+||+++.++.+||+|||++.......
T Consensus 106 ~-~~~~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 106 M-GTCAEKLKKR--MQGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp C-SEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred c-CCcHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 9 5566655542 24568999999999999999999997 5 99999999999999999999999999997654332
Q ss_pred cccccccccCCCccCCCccC-----CCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecc
Q 002358 766 THISSVARGTVGYLDPEYYG-----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 840 (931)
Q Consensus 766 ~~~~~~~~gt~~y~APE~l~-----~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~ 840 (931)
. .....|++.|+|||.+. ...++.++||||||+++|||++|+.||..... .... ........ .....
T Consensus 180 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~---~~~~~~~~-~~~~~ 251 (318)
T 2dyl_A 180 A--KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT--DFEV---LTKVLQEE-PPLLP 251 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS--HHHH---HHHHHHSC-CCCCC
T ss_pred c--ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc--cHHH---HHHHhccC-CCCCC
Confidence 2 22345899999999984 56788999999999999999999999973221 1111 11122211 11110
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 841 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 841 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
. ... ....+.+++.+||+.||++||+++|+++
T Consensus 252 ~---~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 252 G---HMG----FSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp S---SSC----CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred c---cCC----CCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0 001 1236789999999999999999999985
No 243
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.5e-34 Score=346.04 Aligned_cols=269 Identities=22% Similarity=0.313 Sum_probs=205.6
Q ss_pred HHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEec------CCeE
Q 002358 609 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE------EHQR 680 (931)
Q Consensus 609 ~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~------~~~~ 680 (931)
..|++.+.||+|+||.||+|.+. +|+.||||+++... ....+.+.+|++++++++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 56888999999999999999875 68999999987643 3445779999999999999999999998765 6778
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCc---eEEecccc
Q 002358 681 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDFGL 757 (931)
Q Consensus 681 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~---vkL~DFGl 757 (931)
++||||+++|+|.+++........+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 9999999999999999875555578999999999999999999998 89999999999999997665 99999999
Q ss_pred cccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCee
Q 002358 758 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 837 (931)
Q Consensus 758 a~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~ 837 (931)
+........ .....||+.|+|||.+.+..++.++||||||+++|||++|..||..... ...|...........
T Consensus 171 a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-----~~~~~~~i~~~~~~~ 243 (676)
T 3qa8_A 171 AKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-----PVQWHGKVREKSNEH 243 (676)
T ss_dssp CCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-----HHHSSTTCC------
T ss_pred ccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-----hhhhhhhhhcccchh
Confidence 987654322 2335689999999999999999999999999999999999999963221 122221111111111
Q ss_pred eccccc------------ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHH-----HHHHHHhhhhh
Q 002358 838 SIVDPV------------LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQE-----IVLAIQDSIKI 887 (931)
Q Consensus 838 ~i~d~~------------l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~e-----vl~~L~~~~~~ 887 (931)
...... ............+.+++.+||+.||++|||++| +.+.++++...
T Consensus 244 ~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ 310 (676)
T 3qa8_A 244 IVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310 (676)
T ss_dssp CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred hhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence 111100 111233446678999999999999999999988 44556655543
No 244
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=8.5e-35 Score=322.99 Aligned_cols=240 Identities=25% Similarity=0.392 Sum_probs=196.0
Q ss_pred HHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccch------hhhhHHHHHHHHHhcC--CCCCcceeEEEecCC
Q 002358 608 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIH--HRNLVPLIGYCEEEH 678 (931)
Q Consensus 608 ~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~------~~~~~~~E~~il~~l~--HpnIv~l~g~~~~~~ 678 (931)
...|++.+.||+|+||.||+|... +++.||||++...... ..+.+.+|+.++++++ |+||+++++++...+
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 445777899999999999999875 6899999998654221 2356778999999996 599999999999999
Q ss_pred eEEEEEEecCC-CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCcccc-CCCceEEeccc
Q 002358 679 QRILVYEYMHN-GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAKVSDFG 756 (931)
Q Consensus 679 ~~~lV~E~~~~-gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld-~~~~vkL~DFG 756 (931)
..++|+|++.+ ++|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++ +++.+||+|||
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred cEEEEEEcCCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 99999999986 899999874 4568999999999999999999998 8999999999999999 78999999999
Q ss_pred ccccccccccccccccccCCCccCCCccCCCCC-CccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCC
Q 002358 757 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD 835 (931)
Q Consensus 757 la~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~-s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~ 835 (931)
+++...... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... .. .. +.
T Consensus 196 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~~-------~~-~~ 259 (320)
T 3a99_A 196 SGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EI-------IR-GQ 259 (320)
T ss_dssp TCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HH-------HH-CC
T ss_pred ccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-----hh-------hc-cc
Confidence 998765332 223458999999999876665 678999999999999999999996221 00 11 11
Q ss_pred eeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 836 VISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 836 ~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
. ...... ...+.+++.+||+.+|++||+++||++
T Consensus 260 ~------~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 260 V------FFRQRV----SSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp C------CCSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred c------cccccC----CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 011112 236789999999999999999999986
No 245
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=6e-34 Score=329.38 Aligned_cols=247 Identities=23% Similarity=0.333 Sum_probs=183.8
Q ss_pred HHhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhc-CCCCCcceeEEEecCCeEEEEEEecC
Q 002358 610 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYMH 688 (931)
Q Consensus 610 ~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~~~~lV~E~~~ 688 (931)
.+++.+.||+|+||+||.....+++.||||++.... ...+.+|+++|+++ +|||||++++++.+....++||||+.
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 355578999999999776666679999999986532 23467899999999 79999999999999999999999996
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccC-----CCceEEecccccccccc
Q 002358 689 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI-----NMRAKVSDFGLSRQAEE 763 (931)
Q Consensus 689 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~-----~~~vkL~DFGla~~~~~ 763 (931)
|+|.+++.... .......++.++.||++||+|||+ .+|+||||||+|||++. ...+||+|||+++....
T Consensus 102 -g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 102 -ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp -EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred -CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 69999997542 234444567899999999999998 89999999999999943 23578999999987653
Q ss_pred ccc--ccccccccCCCccCCCccC---CCCCCccchhHHHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhhcCCee
Q 002358 764 DLT--HISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVI 837 (931)
Q Consensus 764 ~~~--~~~~~~~gt~~y~APE~l~---~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~ 837 (931)
... .......||+.|+|||++. ...++.++|||||||++|||++ |..||..... ... ....... ..
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~-~~~------~~~~~~~-~~ 247 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ-RQA------NILLGAC-SL 247 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT-HHH------HHHTTCC-CC
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH-HHH------HHHhccC-Cc
Confidence 321 2233456999999999997 4567889999999999999999 9999863221 111 1111111 11
Q ss_pred ecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 838 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 838 ~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.... ........+.+++.+||+.||++|||++|+++
T Consensus 248 ~~~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 248 DCLH------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TTSC------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccC------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1111 11223345789999999999999999999983
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=5.1e-33 Score=303.87 Aligned_cols=237 Identities=14% Similarity=0.192 Sum_probs=184.3
Q ss_pred HHHHHHhhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc---hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEE
Q 002358 606 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 681 (931)
Q Consensus 606 l~~~~~~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~ 681 (931)
+....|++.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|++++.+++||||+++++++.+.+..+
T Consensus 28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 107 (286)
T 3uqc_A 28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGL 107 (286)
T ss_dssp ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEE
Confidence 33455778899999999999999987 489999999976432 23477999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccc
Q 002358 682 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 761 (931)
Q Consensus 682 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~ 761 (931)
+||||+++++|.++++. . .....+.+++.|+++||+|||+ .+|+||||||+|||++.++.+||+++|
T Consensus 108 lv~e~~~g~~L~~~l~~----~-~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~----- 174 (286)
T 3uqc_A 108 VVAEWIRGGSLQEVADT----S-PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPA----- 174 (286)
T ss_dssp EEEECCCEEEHHHHHTT----C-CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCC-----
T ss_pred EEEEecCCCCHHHHHhc----C-CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecc-----
Confidence 99999999999999863 2 3455788999999999999998 899999999999999999999998543
Q ss_pred cccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeeccc
Q 002358 762 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 841 (931)
Q Consensus 762 ~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d 841 (931)
|++ .++.++|||||||++|||++|+.||............ ..... +.. ..
T Consensus 175 ----------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~---~~~~~-~~~---~~ 224 (286)
T 3uqc_A 175 ----------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA---ERDTA-GQP---IE 224 (286)
T ss_dssp ----------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC---CBCTT-SCB---CC
T ss_pred ----------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH---HHHhc-cCC---CC
Confidence 333 2688999999999999999999999754332110000 00000 000 00
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 002358 842 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 889 (931)
Q Consensus 842 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 889 (931)
+ ..........+.+++.+||+.||++| |++|+++.|+++.....
T Consensus 225 ~---~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 225 P---ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp H---HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred h---hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 0 00111223468899999999999999 99999999999876554
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.9e-34 Score=346.81 Aligned_cols=242 Identities=18% Similarity=0.283 Sum_probs=193.8
Q ss_pred HHHHHHhhccccCccCcEEEEEEEEC--CCcEEEEEEccCcc-chhhhhHHHHHHHHHhcCCCCCcceeEEEecCCe---
Q 002358 606 LEEATNNFCKKIGKGSFGSVYYGKMK--DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ--- 679 (931)
Q Consensus 606 l~~~~~~~~~~LG~G~fG~Vy~a~~~--~g~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~--- 679 (931)
+....|++.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+.
T Consensus 77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 156 (681)
T 2pzi_A 77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD 156 (681)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred EeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence 33456788899999999999999986 58999999986543 3345678999999999999999999999987655
Q ss_pred --EEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccc
Q 002358 680 --RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGL 757 (931)
Q Consensus 680 --~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGl 757 (931)
.++||||+++++|.+.+.. .+++..++.++.||++||.|||+ .+|+||||||+|||++.+ .+||+|||+
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred ceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEeccc
Confidence 7999999999999887652 68999999999999999999998 899999999999999885 899999999
Q ss_pred cccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCee
Q 002358 758 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 837 (931)
Q Consensus 758 a~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~ 837 (931)
++..... ....||+.|+|||++.+.. +.++|||||||++|||++|..||....... +.
T Consensus 228 a~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~----------------~~ 285 (681)
T 2pzi_A 228 VSRINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG----------------LP 285 (681)
T ss_dssp CEETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS----------------CC
T ss_pred chhcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc----------------cc
Confidence 9875433 3346899999999987654 889999999999999999998886321110 00
Q ss_pred ecccccccCCCCHHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHhhh
Q 002358 838 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRP-KMQEIVLAIQDSI 885 (931)
Q Consensus 838 ~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-s~~evl~~L~~~~ 885 (931)
...........+.+++.+||+.||++|| +++++.+.|....
T Consensus 286 -------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 286 -------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp -------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred -------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 0000011224678999999999999999 5777777776654
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.98 E-value=4.7e-32 Score=297.69 Aligned_cols=224 Identities=21% Similarity=0.305 Sum_probs=175.0
Q ss_pred Hhhc-cccCccCcEEEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHH-HhcCCCCCcceeEEEec----CCeEEEE
Q 002358 611 NNFC-KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALL-SRIHHRNLVPLIGYCEE----EHQRILV 683 (931)
Q Consensus 611 ~~~~-~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il-~~l~HpnIv~l~g~~~~----~~~~~lV 683 (931)
|.+. +.||+|+||.||+|... +++.||+|+++.. ..+.+|++++ +.++||||+++++++.. ....++|
T Consensus 19 y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 93 (299)
T 3m2w_A 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV 93 (299)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred hhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEE
Confidence 3444 77999999999999885 6899999998642 4567888888 55689999999999876 6778999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccC---CCceEEeccccccc
Q 002358 684 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQ 760 (931)
Q Consensus 684 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~---~~~vkL~DFGla~~ 760 (931)
|||+++|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+|||++. ++.+||+|||++..
T Consensus 94 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 169 (299)
T 3m2w_A 94 MECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 169 (299)
T ss_dssp ECCCCSCBHHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEeccccccc
Confidence 9999999999999864 33569999999999999999999998 89999999999999998 78899999999864
Q ss_pred ccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhhcCCeeecc
Q 002358 761 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 840 (931)
Q Consensus 761 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~ 840 (931)
.. +..++.++|||||||++|||++|+.||........ .......+.
T Consensus 170 ~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-----------~~~~~~~~~ 215 (299)
T 3m2w_A 170 TT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----------SPGMKTRIR 215 (299)
T ss_dssp CT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------CCSCCSSC
T ss_pred cc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-----------hHHHHHHHh
Confidence 32 23467899999999999999999999963322110 000000000
Q ss_pred cccccCCCC----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002358 841 DPVLIGNVK----IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 879 (931)
Q Consensus 841 d~~l~~~~~----~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 879 (931)
.... ..+ ......+.+++.+||+.||++|||++|+++
T Consensus 216 ~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 216 MGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp TTCC--SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hccc--cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0000 011 112346889999999999999999999986
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.98 E-value=1.7e-32 Score=315.60 Aligned_cols=237 Identities=16% Similarity=0.135 Sum_probs=177.0
Q ss_pred hhccccCccCcEEEEEEEEC-CCcEEEEEEccCccc---hhhhhHHHHHHHHHhcCC-CCC---------cceeEE----
Q 002358 612 NFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHH-RNL---------VPLIGY---- 673 (931)
Q Consensus 612 ~~~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H-pnI---------v~l~g~---- 673 (931)
...+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+.+++.++| +|. +.....
T Consensus 81 ~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (413)
T 3dzo_A 81 VRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDP 160 (413)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECC
T ss_pred EEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccC
Confidence 34678999999999999965 699999999874322 235779999999999977 221 111111
Q ss_pred --------Eec-----CCeEEEEEEecCCCCHHHHhcc----CCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecC
Q 002358 674 --------CEE-----EHQRILVYEYMHNGTLRDRLHG----SVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRD 736 (931)
Q Consensus 674 --------~~~-----~~~~~lV~E~~~~gsL~~~L~~----~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~D 736 (931)
+.. ....+++|+.+ +++|.+++.. ......+++..++.++.|+++||+|||+ .+|+|||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~iiHrD 236 (413)
T 3dzo_A 161 QKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTY 236 (413)
T ss_dssp C---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEECSC
T ss_pred CCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCC
Confidence 111 12346666655 6899988842 1134567888999999999999999998 8999999
Q ss_pred CCCCCccccCCCceEEecccccccccccccccccccccCCCccCCCcc----------CCCCCCccchhHHHHHHHHHHH
Q 002358 737 VKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYY----------GNQQLTEKSDVYSFGVVLLELI 806 (931)
Q Consensus 737 Ikp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l----------~~~~~s~ksDVwSlGvlL~eLl 806 (931)
|||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++|||+
T Consensus 237 iKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell 311 (413)
T 3dzo_A 237 LRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW 311 (413)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH
T ss_pred cccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH
Confidence 9999999999999999999998865443 233457 999999998 6667899999999999999999
Q ss_pred hCCCCCCccCccchhhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 002358 807 SGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIV 878 (931)
Q Consensus 807 tG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl 878 (931)
+|+.||......... ..++.. .... +..+.+++.+||+.+|++||++.|++
T Consensus 312 tg~~Pf~~~~~~~~~---------------~~~~~~--~~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 312 CADLPNTDDAALGGS---------------EWIFRS--CKNI----PQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HSSCCCCTTGGGSCS---------------GGGGSS--CCCC----CHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HCCCCCCCcchhhhH---------------HHHHhh--cccC----CHHHHHHHHHHccCChhhCcCHHHHH
Confidence 999999743321110 011110 0112 24688999999999999999977774
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=3.7e-33 Score=311.76 Aligned_cols=243 Identities=18% Similarity=0.226 Sum_probs=184.6
Q ss_pred HHHHHHhhccccCccCcEEEEEEEECCCcEEEEEEccCccc--------hhhhhHHHHHHHHHhcC---------CCCCc
Q 002358 606 LEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIH---------HRNLV 668 (931)
Q Consensus 606 l~~~~~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~--------~~~~~~~~E~~il~~l~---------HpnIv 668 (931)
+....|++.+.||+|+||.||+|++ +|+.||||++..... ...+.+.+|+++++.++ ||||+
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv 95 (336)
T 2vuw_A 17 LPTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI 95 (336)
T ss_dssp SCHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred cccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence 3456788899999999999999998 589999999875421 22367889999999886 88888
Q ss_pred ceeEEEe------------------------------cCCeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 002358 669 PLIGYCE------------------------------EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAA 718 (931)
Q Consensus 669 ~l~g~~~------------------------------~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia 718 (931)
++.+.+. .....++||||+++|++.+.+.. ..+++..+..++.||+
T Consensus 96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLT 171 (336)
T ss_dssp CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHH
T ss_pred hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHH
Confidence 7777642 26789999999999977666642 4589999999999999
Q ss_pred HHhHHhh-hcCCCCeEecCCCCCCccccCCC--------------------ceEEecccccccccccccccccccccCCC
Q 002358 719 KGLEYLH-TGCNPGIIHRDVKSSNILLDINM--------------------RAKVSDFGLSRQAEEDLTHISSVARGTVG 777 (931)
Q Consensus 719 ~aL~yLH-~~~~~~ivH~DIkp~NILld~~~--------------------~vkL~DFGla~~~~~~~~~~~~~~~gt~~ 777 (931)
.||+||| + .+|+||||||+|||++.++ .+||+|||+++..... ...||+.
T Consensus 172 ~aL~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~ 242 (336)
T 2vuw_A 172 ASLAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV 242 (336)
T ss_dssp HHHHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC
T ss_pred HHHHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeec
Confidence 9999999 7 8999999999999999887 8999999999876432 2368999
Q ss_pred ccCCCccCCCCCCccchhHHHHHH-HHHHHhCCCCCCccCccchhhHHHHHHHhhh-cCCeeecccccccCCCCHHHHHH
Q 002358 778 YLDPEYYGNQQLTEKSDVYSFGVV-LLELISGKKPVSVEDFGAELNIVHWARSMIK-KGDVISIVDPVLIGNVKIESIWR 855 (931)
Q Consensus 778 y~APE~l~~~~~s~ksDVwSlGvl-L~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~-~~~~~~i~d~~l~~~~~~~~~~~ 855 (931)
|+|||++.+.. +.++||||++++ .+++++|..||... .........+. ..... ..............
T Consensus 243 y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~ 311 (336)
T 2vuw_A 243 SMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV------LWLHYLTDKMLKQMTFK----TKCNTPAMKQIKRK 311 (336)
T ss_dssp TTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH------HHHHHHHHHHHHTCCCS----SCCCSHHHHHHHHH
T ss_pred ccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch------hhhhHHHHhhhhhhccC----cccchhhhhhcCHH
Confidence 99999998766 889999998777 77788899998511 01011111111 10110 00011112345567
Q ss_pred HHHHHHHccccCCCCCCCHHHHH
Q 002358 856 IAEVAIQCVEQRGFSRPKMQEIV 878 (931)
Q Consensus 856 l~~li~~Cl~~dP~~RPs~~evl 878 (931)
+.+++.+||+.+ |++|++
T Consensus 312 ~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 312 IQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHHhccC-----CHHHHH
Confidence 899999999866 888887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=3.5e-27 Score=281.35 Aligned_cols=186 Identities=17% Similarity=0.141 Sum_probs=130.6
Q ss_pred cccCccCcEEEEEEEE-CCCcEEEEEEccCcc----------chhhhhHHHHHHHHHhc-CCCCCcceeEEEecCCeEEE
Q 002358 615 KKIGKGSFGSVYYGKM-KDGKEVAVKIMADSC----------SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRIL 682 (931)
Q Consensus 615 ~~LG~G~fG~Vy~a~~-~~g~~vAvK~~~~~~----------~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~~~~l 682 (931)
...+.|++|.+..++. --|+.+|+|++.... ....++|.+|+++|+++ .|+||+++++++++++..||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 4567777776666543 258999999986532 12345799999999999 69999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEeccccccccc
Q 002358 683 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 762 (931)
Q Consensus 683 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~ 762 (931)
||||++|++|.+.|.. .+.++.. +|+.||+.||+|||+ ++||||||||+|||+++++.+||+|||+++...
T Consensus 320 VMEyv~G~~L~d~i~~---~~~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAA---GEEIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EEECCCSEEHHHHHHT---TCCCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EEecCCCCcHHHHHHh---CCCCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 9999999999999984 4556653 588999999999998 999999999999999999999999999998765
Q ss_pred ccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCC
Q 002358 763 EDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKP 811 (931)
Q Consensus 763 ~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~P 811 (931)
..... .....||+.|||||++.+ .+..++|+||+|+++++|.++..+
T Consensus 391 ~~~~~-~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 391 QDCSW-PTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ---CC-SHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCcc-ccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 44332 234569999999999876 467789999999998887665444
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.89 E-value=6.4e-24 Score=251.76 Aligned_cols=183 Identities=17% Similarity=0.204 Sum_probs=146.0
Q ss_pred ccccCccCcEEEEEEEECCCcEEEEEEccCccc--------hhhhhHHHHHHHHHhcCCCCCcceeEEEecCCeEEEEEE
Q 002358 614 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 614 ~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~--------~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~~lV~E 685 (931)
.+.||+|+||.||+|.+. ++.+++|+...... ...+.+.+|++++++++||||+++..++...+..++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 568999999999999554 78899988643211 123558999999999999999977666667777899999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccc
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 765 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~ 765 (931)
|+++++|.+++.. +..++.|+++||+|||+ ++|+||||||+|||++. .+||+|||+++......
T Consensus 420 ~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 420 YINGKLAKDVIED-----------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp CCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred CCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 9999999999873 46899999999999998 89999999999999998 99999999999865432
Q ss_pred ccc------ccccccCCCccCCCccCC--CCCCccchhHHHHHHHHHHHhCCCCCC
Q 002358 766 THI------SSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPVS 813 (931)
Q Consensus 766 ~~~------~~~~~gt~~y~APE~l~~--~~~s~ksDVwSlGvlL~eLltG~~Pf~ 813 (931)
... .....||+.|||||++.. ..|+..+|+|+..+-..+.+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 221 234569999999999976 567888999999999888888777663
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.83 E-value=2.8e-21 Score=210.25 Aligned_cols=141 Identities=15% Similarity=0.113 Sum_probs=115.1
Q ss_pred hccccCccCcEEEEEEEECCCcEEEEEEccCccc------------------hhhhhHHHHHHHHHhcCCCCCcceeEEE
Q 002358 613 FCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS------------------HRTQQFVTEVALLSRIHHRNLVPLIGYC 674 (931)
Q Consensus 613 ~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~------------------~~~~~~~~E~~il~~l~HpnIv~l~g~~ 674 (931)
+.+.||+|+||.||+|.+.+|+.||+|+++.... .....+.+|++++++++ | +++.+++
T Consensus 94 ~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~ 170 (282)
T 1zar_A 94 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVY 170 (282)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEE
T ss_pred ecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEE
Confidence 3588999999999999997799999999864321 13456899999999999 4 6666655
Q ss_pred ecCCeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEec
Q 002358 675 EEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSD 754 (931)
Q Consensus 675 ~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~D 754 (931)
.. +..++||||+++|+|.+ +.. .....++.|+++||.|||+ .+|+||||||+|||++ ++.+||+|
T Consensus 171 ~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~-~~~vkl~D 235 (282)
T 1zar_A 171 AW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS-EEGIWIID 235 (282)
T ss_dssp EE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE-TTEEEECC
T ss_pred ec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE-CCcEEEEE
Confidence 43 45699999999999988 531 1245799999999999998 9999999999999999 99999999
Q ss_pred ccccccccccccccccccccCCCccCCCccC
Q 002358 755 FGLSRQAEEDLTHISSVARGTVGYLDPEYYG 785 (931)
Q Consensus 755 FGla~~~~~~~~~~~~~~~gt~~y~APE~l~ 785 (931)
||+++. +..++|||++.
T Consensus 236 FG~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 236 FPQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp CTTCEE--------------TTSTTHHHHHH
T ss_pred CCCCeE--------------CCCCCHHHHHH
Confidence 999863 34578888864
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.70 E-value=1.6e-17 Score=178.20 Aligned_cols=135 Identities=23% Similarity=0.246 Sum_probs=105.3
Q ss_pred hhccccCccCcEEEEEEEE-CCCcE--EEEEEccCccch------------------------hhhhHHHHHHHHHhcCC
Q 002358 612 NFCKKIGKGSFGSVYYGKM-KDGKE--VAVKIMADSCSH------------------------RTQQFVTEVALLSRIHH 664 (931)
Q Consensus 612 ~~~~~LG~G~fG~Vy~a~~-~~g~~--vAvK~~~~~~~~------------------------~~~~~~~E~~il~~l~H 664 (931)
++.+.||+|+||.||+|.+ .+|+. ||||+++..... ....+.+|+++|.+++|
T Consensus 50 ~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 129 (258)
T 1zth_A 50 AMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKE 129 (258)
T ss_dssp EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHh
Confidence 3567899999999999998 67989 999987543111 11367899999999998
Q ss_pred CCC--cceeEEEecCCeEEEEEEecCC-C----CHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhh-hcCCCCeEecC
Q 002358 665 RNL--VPLIGYCEEEHQRILVYEYMHN-G----TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH-TGCNPGIIHRD 736 (931)
Q Consensus 665 pnI--v~l~g~~~~~~~~~lV~E~~~~-g----sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH-~~~~~~ivH~D 736 (931)
+++ ..+++. ...++||||+.+ | +|.+.... .++..+..++.|+++||.||| + .+|+|||
T Consensus 130 ~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~---~givHrD 196 (258)
T 1zth_A 130 AGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQE---AELVHAD 196 (258)
T ss_dssp TTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHT---SCEECSS
T ss_pred CCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHH---CCEEeCC
Confidence 864 334432 356899999942 4 67776432 224456789999999999999 7 8999999
Q ss_pred CCCCCccccCCCceEEecccccccc
Q 002358 737 VKSSNILLDINMRAKVSDFGLSRQA 761 (931)
Q Consensus 737 Ikp~NILld~~~~vkL~DFGla~~~ 761 (931)
|||+|||+++ .++|+|||++...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999754
No 255
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.68 E-value=3.9e-17 Score=180.24 Aligned_cols=150 Identities=27% Similarity=0.494 Sum_probs=130.2
Q ss_pred CchhhHHHHHHHHhhcCCC-CCCCCCC-CCCCCCCCceEEeeCCC-CCcEEEEEeCCCCCcc--cCCccccCccccceec
Q 002358 369 TEWQDVMVLEALRSISDES-ERTNDRG-DPCVPVPWEWVTCSTTT-PPRITKIALSGKNLKG--EIPPELKNMEALTELW 443 (931)
Q Consensus 369 t~~~d~~~L~~l~~~~~~~-~~~~w~~-dpc~~~~w~~v~c~~~~-~~~l~~L~L~~n~l~g--~ip~~~~~L~~L~~L~ 443 (931)
..++|..||.++|+.+..+ ...+|.. .+||.+.|.||.|+... ..+|+.|+|++|+++| .+|+.|++|++|+.|+
T Consensus 3 c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~ 82 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLY 82 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEE
T ss_pred CCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCeee
Confidence 5678999999999998543 4557753 34444569999997542 3589999999999999 9999999999999999
Q ss_pred ccC-CcCCCCCC-CccccccccEeecCCccccCCCCCccCCccccccccccccCCCCCCCccccc--CceeeeecCCCC
Q 002358 444 LDG-NFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPK 518 (931)
Q Consensus 444 Ls~-N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l~~N~l~g~iP~~~~~--~~~~l~~~~N~~ 518 (931)
|++ |++.+.+| .|+++++|+.|+|++|+++|.+|..++++++|+.|+|++|+++|.+|..+.. .+..+.+++|..
T Consensus 83 L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 161 (313)
T 1ogq_A 83 IGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRI 161 (313)
T ss_dssp EEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCC
T ss_pred CCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcc
Confidence 995 99999999 5999999999999999999999999999999999999999999999988754 778888888864
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.64 E-value=3.1e-16 Score=194.61 Aligned_cols=166 Identities=19% Similarity=0.234 Sum_probs=133.9
Q ss_pred CCccccchhhhhhhheeecc---cCCchhhHHHHHHHHhhcCCCCCCCCCCCC------CCCCCC------------ceE
Q 002358 347 DSTLGPLLNAIEISKYQKIA---AKTEWQDVMVLEALRSISDESERTNDRGDP------CVPVPW------------EWV 405 (931)
Q Consensus 347 ~s~l~p~ina~e~~~~~~~~---~~t~~~d~~~L~~l~~~~~~~~~~~w~~dp------c~~~~w------------~~v 405 (931)
.....-.-|+++-.+.+++. ..+..+|..||.++|+.+... +|+.+. |++|.| .||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV 317 (876)
T 4ecn_A 241 GESFTVIDNKLTKDANVPIQLKETAEYIKDYKALKAIWEALDGK---NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGV 317 (876)
T ss_dssp CCCEEECTTSEEEEEEEEECCCCCCHHHHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTE
T ss_pred CCceEEeecccccccccceeccccccchHHHHHHHHHHHHcCCC---CCCcCCCcccccCCccccccccccccccCcCce
Confidence 33333334443445555554 245568999999999998643 675322 223689 999
Q ss_pred EeeCCCCCcEEEEEeCCCCCcccCCccccCccccceecc-cCCcCCCC--------------------------------
Q 002358 406 TCSTTTPPRITKIALSGKNLKGEIPPELKNMEALTELWL-DGNFLTGP-------------------------------- 452 (931)
Q Consensus 406 ~c~~~~~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~L-s~N~l~g~-------------------------------- 452 (931)
+|++. .+|+.|+|++|+|.|.+|++|++|++|+.|+| ++|.++|.
T Consensus 318 ~C~~~--~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~ 395 (876)
T 4ecn_A 318 DLDNN--GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYD 395 (876)
T ss_dssp EECTT--SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCC
T ss_pred EecCC--CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccC
Confidence 99874 69999999999999999999999999999999 88766554
Q ss_pred --------------------------------------------CC-CccccccccEeecCCccccC-------------
Q 002358 453 --------------------------------------------LP-DMSRLIDLRIVHLENNELTG------------- 474 (931)
Q Consensus 453 --------------------------------------------~p-~~~~l~~L~~L~L~~N~l~g------------- 474 (931)
+| +|++|++|+.|+|++|+|+|
T Consensus 396 ~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n 475 (876)
T 4ecn_A 396 QRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSD 475 (876)
T ss_dssp GGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSH
T ss_pred cchhhhHHHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccc
Confidence 66 58999999999999999998
Q ss_pred ----CCCCccC--CccccccccccccCCCCCCCccccc--CceeeeecCCC
Q 002358 475 ----SLPSYMG--SLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNP 517 (931)
Q Consensus 475 ----~iP~~l~--~l~~L~~l~l~~N~l~g~iP~~~~~--~~~~l~~~~N~ 517 (931)
.||++++ +|++|+.|+|++|++.|.+|..+.. .+..+.+++|.
T Consensus 476 ~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 476 YAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp HHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred cccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 4999998 9999999999999999999988765 78888899987
No 257
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.59 E-value=1.3e-15 Score=184.41 Aligned_cols=146 Identities=18% Similarity=0.237 Sum_probs=124.5
Q ss_pred CCchhhHHHHHHHHhhcCCCCCC----------CCCCCCCCCCCC---ceEEeeCCCCCcEEEEEeCCCCCcccCCcccc
Q 002358 368 KTEWQDVMVLEALRSISDESERT----------NDRGDPCVPVPW---EWVTCSTTTPPRITKIALSGKNLKGEIPPELK 434 (931)
Q Consensus 368 ~t~~~d~~~L~~l~~~~~~~~~~----------~w~~dpc~~~~w---~~v~c~~~~~~~l~~L~L~~n~l~g~ip~~~~ 434 (931)
.....|..||.+++..+....+. +|+.+.+ +|.| .||+|+.. .+|+.|+|++|+++|.+|++|+
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~-~c~w~~~~GV~C~~~--~~V~~L~L~~~~l~g~lp~~l~ 102 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKE-LDMWGAQPGVSLNSN--GRVTGLSLEGFGASGRVPDAIG 102 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSC-GGGTTCCTTEEECTT--CCEEEEECTTSCCEEEECGGGG
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCC-cccccCCCCeEEcCC--CCEEEEEecCcccCCcCChHHh
Confidence 34457999999999887644332 6764321 2369 99999865 5999999999999999999999
Q ss_pred CccccceecccCCc------------------------------------------------------------------
Q 002358 435 NMEALTELWLDGNF------------------------------------------------------------------ 448 (931)
Q Consensus 435 ~L~~L~~L~Ls~N~------------------------------------------------------------------ 448 (931)
+|++|+.|+|++|.
T Consensus 103 ~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 182 (636)
T 4eco_A 103 QLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182 (636)
T ss_dssp GCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCC
T ss_pred cCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccc
Confidence 99999999999984
Q ss_pred ------------CCCCCC-CccccccccEeecCCccccCC-----------------CCCccC--CccccccccccccCC
Q 002358 449 ------------LTGPLP-DMSRLIDLRIVHLENNELTGS-----------------LPSYMG--SLPNLQELHIENNSF 496 (931)
Q Consensus 449 ------------l~g~~p-~~~~l~~L~~L~L~~N~l~g~-----------------iP~~l~--~l~~L~~l~l~~N~l 496 (931)
|+| +| .+++|++|+.|+|++|+|+|. +|++++ +|++|+.|+|++|++
T Consensus 183 l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l 261 (636)
T 4eco_A 183 LKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPN 261 (636)
T ss_dssp CCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTT
T ss_pred hhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcC
Confidence 446 66 599999999999999999986 999999 999999999999999
Q ss_pred CCCCCccccc--CceeeeecCCC
Q 002358 497 VGEIPPALLT--GKVIFKYDNNP 517 (931)
Q Consensus 497 ~g~iP~~~~~--~~~~l~~~~N~ 517 (931)
.|.+|..+.. .+..+.+++|.
T Consensus 262 ~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 262 LTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CSSCCTTTTTCSSCCEEECTTCT
T ss_pred CccChHHHhcCCCCCEEECcCCC
Confidence 9999998765 78888889886
No 258
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.51 E-value=1.9e-14 Score=161.22 Aligned_cols=137 Identities=16% Similarity=0.148 Sum_probs=99.6
Q ss_pred HhhccccCccCcEEEEEEEECCCcEEEEEEccCccch--------------hh--------hhHHHHHHHHHhcCCCCCc
Q 002358 611 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSH--------------RT--------QQFVTEVALLSRIHHRNLV 668 (931)
Q Consensus 611 ~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~--------------~~--------~~~~~E~~il~~l~HpnIv 668 (931)
|++.+.||+|++|.||+|...+|+.||||+++..... .. ....+|...|.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4567889999999999999999999999987532110 00 1124567777777655443
Q ss_pred ceeEEEecCCeEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCC
Q 002358 669 PLIGYCEEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM 748 (931)
Q Consensus 669 ~l~g~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~ 748 (931)
...-+... ..++||||++|++|.+.... + ....++.|++.+|.+||+ .+||||||||.|||+++++
T Consensus 177 vp~p~~~~--~~~LVME~i~G~~L~~l~~~-------~--~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 177 VPEPIAQS--RHTIVMSLVDALPMRQVSSV-------P--DPASLYADLIALILRLAK---HGLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CCCEEEEE--TTEEEEECCSCEEGGGCCCC-------S--CHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEEEE
T ss_pred CCeeeecc--CceEEEEecCCccHhhhccc-------H--HHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeCCC
Confidence 22222222 23799999999888664321 1 235688999999999998 8999999999999998876
Q ss_pred ----------ceEEecccccccc
Q 002358 749 ----------RAKVSDFGLSRQA 761 (931)
Q Consensus 749 ----------~vkL~DFGla~~~ 761 (931)
.+.|+||+-+...
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEET
T ss_pred CcccccccccceEEEEeCCcccC
Confidence 3899999966543
No 259
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.51 E-value=2.9e-14 Score=145.82 Aligned_cols=121 Identities=23% Similarity=0.304 Sum_probs=106.0
Q ss_pred CCCceEEeeCC--------CCCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCc
Q 002358 400 VPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENN 470 (931)
Q Consensus 400 ~~w~~v~c~~~--------~~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N 470 (931)
|.|..+.|+.. .+++++.|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+ .|.+|++|+.|+|++|
T Consensus 10 C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 10 CLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 35666777542 2458999999999999 899999999999999999999999998 5999999999999999
Q ss_pred cccCCCCCccCCccccccccccccCCCCCCCccccc---CceeeeecCCCCcccc
Q 002358 471 ELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 522 (931)
Q Consensus 471 ~l~g~iP~~l~~l~~L~~l~l~~N~l~g~iP~~~~~---~~~~l~~~~N~~~c~~ 522 (931)
+|++..|..|..+++|+.|+|++|+|+ .+|...+. .+..+.+.+||+.|..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCC-eeChhhhhcCccccEEEeCCCCeecCC
Confidence 999877788999999999999999999 77776443 6788899999999864
No 260
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.48 E-value=9.7e-15 Score=180.80 Aligned_cols=111 Identities=32% Similarity=0.436 Sum_probs=103.0
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
.++++.|+|++|+++|.+|.+|++|++|+.|+|++|+|+|.+| ++++|++|+.|||++|+|+|.||..+++|++|+.|+
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 3579999999999999999999999999999999999999999 599999999999999999999999999999999999
Q ss_pred ccccCCCCCCCccc-ccCceeeeecCCCCcccc
Q 002358 491 IENNSFVGEIPPAL-LTGKVIFKYDNNPKLHKE 522 (931)
Q Consensus 491 l~~N~l~g~iP~~~-~~~~~~l~~~~N~~~c~~ 522 (931)
|++|+|+|.||..- +.......+.|||.+|+.
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEEST
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCC
Confidence 99999999999853 345566788999999964
No 261
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.47 E-value=5.4e-14 Score=143.55 Aligned_cols=123 Identities=19% Similarity=0.215 Sum_probs=107.2
Q ss_pred CCCceEEeeCC--------CCCcEEEEEeCCCCCcccCCc-cccCccccceecccCCcCCCCCC-CccccccccEeecCC
Q 002358 400 VPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPP-ELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLEN 469 (931)
Q Consensus 400 ~~w~~v~c~~~--------~~~~l~~L~L~~n~l~g~ip~-~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~ 469 (931)
|.|..+.|+.. .+.+++.|+|++|+|++..+. .|+++++|+.|+|++|+|++.+| .|.++++|+.|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 46788888643 234899999999999966664 49999999999999999999988 599999999999999
Q ss_pred ccccCCCCCccCCccccccccccccCCCCCCCccccc--CceeeeecCCCCcccc
Q 002358 470 NELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPKLHKE 522 (931)
Q Consensus 470 N~l~g~iP~~l~~l~~L~~l~l~~N~l~g~iP~~~~~--~~~~l~~~~N~~~c~~ 522 (931)
|+|++..|..++++++|+.|+|++|+|++.+|..+.. .+..+.+++|++.|..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 9999888888999999999999999999877877644 7888999999998863
No 262
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.43 E-value=2.3e-13 Score=136.62 Aligned_cols=126 Identities=21% Similarity=0.310 Sum_probs=107.3
Q ss_pred CCCCCCCCceEEeeCCC--------CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEe
Q 002358 395 DPCVPVPWEWVTCSTTT--------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIV 465 (931)
Q Consensus 395 dpc~~~~w~~v~c~~~~--------~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L 465 (931)
+.|. |.|.++.|+... +++++.|+|++|++++..+..|+++++|+.|+|++|+|++.++. +.++++|+.|
T Consensus 3 ~~C~-C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 81 (177)
T 2o6r_A 3 SRCS-CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTIL 81 (177)
T ss_dssp TTCE-EETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCE-eCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEE
Confidence 3453 579999997532 45899999999999966666789999999999999999998885 7999999999
Q ss_pred ecCCccccCCCCCccCCccccccccccccCCCCCCCcccc---cCceeeeecCCCCcccc
Q 002358 466 HLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL---TGKVIFKYDNNPKLHKE 522 (931)
Q Consensus 466 ~L~~N~l~g~iP~~l~~l~~L~~l~l~~N~l~g~iP~~~~---~~~~~l~~~~N~~~c~~ 522 (931)
+|++|+|++..|..++++++|+.|+|++|+|+ .+|...+ ..+..+.+++|++.|..
T Consensus 82 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 82 YLHENKLQSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ECCCCCccccCHHHhhCCcccCEEECcCCcce-EeCHHHhcCCcccCEEEecCCCeeccC
Confidence 99999999766677899999999999999999 6777654 36788899999988753
No 263
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.40 E-value=2.1e-13 Score=168.91 Aligned_cols=130 Identities=19% Similarity=0.324 Sum_probs=81.1
Q ss_pred CCchhhHHHHHHHHhhcCCC-CCCCCC-CCCCCCCCCceEEeeCCCCCcEEEEEeCCCCCccc---CCccccCcccccee
Q 002358 368 KTEWQDVMVLEALRSISDES-ERTNDR-GDPCVPVPWEWVTCSTTTPPRITKIALSGKNLKGE---IPPELKNMEALTEL 442 (931)
Q Consensus 368 ~t~~~d~~~L~~l~~~~~~~-~~~~w~-~dpc~~~~w~~v~c~~~~~~~l~~L~L~~n~l~g~---ip~~~~~L~~L~~L 442 (931)
....+|..||.++|+.+.++ ...+|. +..| |.|+||+|+ ..+|+.|+|+++++.|. +|+.|++|+.|+.+
T Consensus 8 ~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~--C~w~gv~C~---~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 8 QSLYREIHQLISFKDVLPDKNLLPDWSSNKNP--CTFDGVTCR---DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCG--GGSTTEEEE---TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred cCCHHHHHHHHHHHhhCCCcccccCCCCCCCC--cCCcceEEC---CCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 34567999999999988643 466886 3334 369999998 36999999999999998 76655555444444
Q ss_pred cccCCcCCCCCCCccccccccEeecCCccccCCCCC--ccCCccccccccccccCCCCCCCc
Q 002358 443 WLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPS--YMGSLPNLQELHIENNSFVGEIPP 502 (931)
Q Consensus 443 ~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~--~l~~l~~L~~l~l~~N~l~g~iP~ 502 (931)
+++.|.+...++.+++|++|++|+|++|+++|.+|. .+++|++|++|+|++|.++|.+|.
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~ 144 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKV 144 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCH
Confidence 444444433223444555555555555555544444 445555555555555554444444
No 264
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.40 E-value=5.5e-13 Score=140.00 Aligned_cols=122 Identities=22% Similarity=0.308 Sum_probs=92.3
Q ss_pred CCCCCCCCCCCceEEeeCC--------CCCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccc
Q 002358 392 DRGDPCVPVPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDL 462 (931)
Q Consensus 392 w~~dpc~~~~w~~v~c~~~--------~~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L 462 (931)
|..+.| .|+++.|+.. .+++++.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. |.++++|
T Consensus 14 ~~~~~C---s~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L 90 (229)
T 3e6j_A 14 PSQCSC---SGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQL 90 (229)
T ss_dssp CTTCEE---ETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CCCCEE---eCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCc
Confidence 334455 5999999753 245789999999999988888888899999999999998777764 6888888
Q ss_pred cEeecCCccccCCCCCccCCccccccccccccCCCCCCCccccc--CceeeeecCCC
Q 002358 463 RIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNP 517 (931)
Q Consensus 463 ~~L~L~~N~l~g~iP~~l~~l~~L~~l~l~~N~l~g~iP~~~~~--~~~~l~~~~N~ 517 (931)
+.|+|++|+|++..+..+..+++|+.|+|++|+|+ .+|..+.. .+..+.+++|.
T Consensus 91 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~ 146 (229)
T 3e6j_A 91 TVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQ 146 (229)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSC
T ss_pred CEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCc
Confidence 88888888888555556777888888888888887 77766533 45555555554
No 265
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.39 E-value=4.3e-13 Score=139.94 Aligned_cols=111 Identities=19% Similarity=0.198 Sum_probs=99.3
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
.++|+.|+|++|.|++..|..|.++++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..+..+++|+.|+
T Consensus 56 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 135 (220)
T 2v70_A 56 LPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLS 135 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEE
T ss_pred CCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEE
Confidence 35899999999999987778999999999999999999999885 89999999999999999988899999999999999
Q ss_pred ccccCCCCCCCccccc--CceeeeecCCCCcccc
Q 002358 491 IENNSFVGEIPPALLT--GKVIFKYDNNPKLHKE 522 (931)
Q Consensus 491 l~~N~l~g~iP~~~~~--~~~~l~~~~N~~~c~~ 522 (931)
|++|+|++..|..+.. .+..+.+++|++.|..
T Consensus 136 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 136 LYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp CTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 9999999666766643 7788899999998863
No 266
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.37 E-value=1.2e-13 Score=153.27 Aligned_cols=146 Identities=21% Similarity=0.249 Sum_probs=119.4
Q ss_pred CCchhhHHHHHHHHhhcCC---CCCCCCC----CCCCCCCCCceEEeeC-------CCCCcEEEEEeCCCCCcccCCccc
Q 002358 368 KTEWQDVMVLEALRSISDE---SERTNDR----GDPCVPVPWEWVTCST-------TTPPRITKIALSGKNLKGEIPPEL 433 (931)
Q Consensus 368 ~t~~~d~~~L~~l~~~~~~---~~~~~w~----~dpc~~~~w~~v~c~~-------~~~~~l~~L~L~~n~l~g~ip~~~ 433 (931)
....+|..+|.++|..+.. .....|. ..+ ..|.|.|+.|.. ...++|+.|+|++|+++ .+|+.+
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~-~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNP-QIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCT-TSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccc-cccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 3456788999999987632 1223562 221 123699999952 23468999999999999 999999
Q ss_pred cCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCccccccccccccCCCCCCCccc--------
Q 002358 434 KNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPAL-------- 504 (931)
Q Consensus 434 ~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l~~N~l~g~iP~~~-------- 504 (931)
++|++|++|+|++|+|+ .+| .++++++|+.|+|++|+|+ .+|..+++|++|+.|+|++|++.|.+|..+
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 99999999999999999 566 6999999999999999999 999999999999999999999999999987
Q ss_pred ---ccCceeeeecCCC
Q 002358 505 ---LTGKVIFKYDNNP 517 (931)
Q Consensus 505 ---~~~~~~l~~~~N~ 517 (931)
...+..+.+++|.
T Consensus 179 ~~~l~~L~~L~L~~n~ 194 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTG 194 (328)
T ss_dssp EEESTTCCEEEEEEEC
T ss_pred hccCCCCCEEECcCCC
Confidence 3466777777764
No 267
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.37 E-value=8.7e-13 Score=137.63 Aligned_cols=110 Identities=20% Similarity=0.279 Sum_probs=94.2
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
.++|+.|+|++|.|++..|..|.+|++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..+..+++|+.|+
T Consensus 55 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 134 (220)
T 2v9t_B 55 YKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLS 134 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEE
Confidence 35789999999999988888999999999999999999987775 78899999999999999988888999999999999
Q ss_pred ccccCCCCCCCcc-cc--cCceeeeecCCCCcccc
Q 002358 491 IENNSFVGEIPPA-LL--TGKVIFKYDNNPKLHKE 522 (931)
Q Consensus 491 l~~N~l~g~iP~~-~~--~~~~~l~~~~N~~~c~~ 522 (931)
|++|+|+ .+|.. +. ..+..+.+.+||+.|..
T Consensus 135 L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 135 LYDNKLQ-TIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CCSSCCS-CCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCCCcCC-EECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 9999999 55554 33 26778889999998853
No 268
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.33 E-value=1.7e-12 Score=129.80 Aligned_cols=103 Identities=27% Similarity=0.341 Sum_probs=87.4
Q ss_pred EEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCcccccccccccc
Q 002358 416 TKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 494 (931)
Q Consensus 416 ~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l~~N 494 (931)
+.|++++|+|+ .+|..+. ++|+.|+|++|+|++.+| .|.+|++|+.|+|++|+|++..|..+.++++|+.|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 57899999998 6888774 899999999999999988 4899999999999999999655566789999999999999
Q ss_pred CCCCCCCcccc---cCceeeeecCCCCcccc
Q 002358 495 SFVGEIPPALL---TGKVIFKYDNNPKLHKE 522 (931)
Q Consensus 495 ~l~g~iP~~~~---~~~~~l~~~~N~~~c~~ 522 (931)
+|+ .+|+..+ ..+..+.+++|++.|..
T Consensus 89 ~l~-~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 89 QLK-SIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCC-CCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred ccC-EeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 999 5666533 36778889999998864
No 269
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.32 E-value=2.9e-12 Score=128.59 Aligned_cols=103 Identities=22% Similarity=0.345 Sum_probs=89.4
Q ss_pred EEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCcccccccccccc
Q 002358 416 TKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 494 (931)
Q Consensus 416 ~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l~~N 494 (931)
+.|++++|+|+ .+|..+. ++|+.|+|++|+|++.+| .|.+|++|+.|+|++|+|++..+..++++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 57999999997 8998875 899999999999999988 5999999999999999999544445799999999999999
Q ss_pred CCCCCCCcccc---cCceeeeecCCCCcccc
Q 002358 495 SFVGEIPPALL---TGKVIFKYDNNPKLHKE 522 (931)
Q Consensus 495 ~l~g~iP~~~~---~~~~~l~~~~N~~~c~~ 522 (931)
+|+ .+|...+ ..+..+.+.+|++.|..
T Consensus 92 ~l~-~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 92 HLK-SIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCC-CCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ccc-eeCHHHhccccCCCEEEeCCCCccccc
Confidence 999 6777643 37788899999998754
No 270
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.31 E-value=2.9e-12 Score=134.46 Aligned_cols=109 Identities=23% Similarity=0.227 Sum_probs=96.6
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
.++|+.|+|++|+|++..+..|.+|++|+.|+|++|+|++.++. |..+++|+.|+|++|+|+ .+|..+..+++|+.|+
T Consensus 63 l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 141 (229)
T 3e6j_A 63 LINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLA 141 (229)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEE
T ss_pred ccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEE
Confidence 35899999999999854456689999999999999999999885 799999999999999999 9999999999999999
Q ss_pred ccccCCCCCCCccccc---CceeeeecCCCCcccc
Q 002358 491 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 522 (931)
Q Consensus 491 l~~N~l~g~iP~~~~~---~~~~l~~~~N~~~c~~ 522 (931)
|++|+|+ .+|...+. .+..+.+.+||+.|..
T Consensus 142 L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 142 LDQNQLK-SIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CCCCcCC-ccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 9999999 67665433 6788899999999864
No 271
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.29 E-value=4.9e-12 Score=130.35 Aligned_cols=122 Identities=23% Similarity=0.356 Sum_probs=97.6
Q ss_pred CCCCCCCCceEEeeCC--------CCCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEe
Q 002358 395 DPCVPVPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIV 465 (931)
Q Consensus 395 dpc~~~~w~~v~c~~~--------~~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L 465 (931)
+.| .|.|.++.|+.. .+++++.|+|++|++++..+..|+++++|+.|+|++|+|++.++. |.++++|+.|
T Consensus 3 ~~C-~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 81 (208)
T 2o6s_A 3 SRC-SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYL 81 (208)
T ss_dssp TTC-EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCC-EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEE
Confidence 345 357999999753 245799999999999966666688999999999999999988775 7899999999
Q ss_pred ecCCccccCCCCCccCCccccccccccccCCCCCCCcccc---cCceeeeecCCCC
Q 002358 466 HLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL---TGKVIFKYDNNPK 518 (931)
Q Consensus 466 ~L~~N~l~g~iP~~l~~l~~L~~l~l~~N~l~g~iP~~~~---~~~~~l~~~~N~~ 518 (931)
+|++|+|++..+..++++++|+.|+|++|+|+ .+|...+ ..+..+.+++|..
T Consensus 82 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l 136 (208)
T 2o6s_A 82 NLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQL 136 (208)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCC
T ss_pred ECCCCcCCccCHhHhcCccCCCEEEcCCCcCc-ccCHhHhccCCcCCEEECCCCcc
Confidence 99999999655566789999999999999998 5555432 3667777777754
No 272
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.28 E-value=6e-13 Score=146.58 Aligned_cols=109 Identities=26% Similarity=0.307 Sum_probs=100.4
Q ss_pred cEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccccccccc
Q 002358 414 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 493 (931)
Q Consensus 414 ~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l~~ 493 (931)
.|+.|+|++|.+++.+|..|+++++|+.|+|++|++++.+|.+..+++|+.|+|++|+|+|.+|..++++++|+.|+|++
T Consensus 198 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 277 (313)
T 1ogq_A 198 NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSF 277 (313)
T ss_dssp CCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCS
T ss_pred cccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcC
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccc-ccCceeeeecCCCCcccc
Q 002358 494 NSFVGEIPPAL-LTGKVIFKYDNNPKLHKE 522 (931)
Q Consensus 494 N~l~g~iP~~~-~~~~~~l~~~~N~~~c~~ 522 (931)
|+|+|.+|... +..+..+.+.+|+++|+.
T Consensus 278 N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 278 NNLCGEIPQGGNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp SEEEEECCCSTTGGGSCGGGTCSSSEEEST
T ss_pred CcccccCCCCccccccChHHhcCCCCccCC
Confidence 99999999862 236677889999999974
No 273
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=99.28 E-value=1.9e-11 Score=122.51 Aligned_cols=141 Identities=15% Similarity=0.199 Sum_probs=98.3
Q ss_pred eEEEecCCCCCccCCCCCeEEecCCccccCCceeeecC------C-CCCcccccccccccCCCccceEEeeecCCceeEE
Q 002358 25 FISIDCGSTSNYTDPSTGLAWISDIGIMNNGKSVKVEN------P-SGNWMQYRTRRDLPIDNKKYCYNLITKERRRYLV 97 (931)
Q Consensus 25 ~~~idcg~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~------~-~~~~~~~~tlr~fp~~~~~~cy~l~~~~~~~ylv 97 (931)
-+.||||+.. .+| ..+++|.+|..|...|....... . ....+.|+|.|.|| .+.+|.+|+.++++|+|
T Consensus 7 ~~~INcGg~~-~~d-~~gr~w~~D~~~~~~g~~~~~~~~~~~~~~~~~~~~lY~TaR~~~---~~~tY~f~v~~~G~Y~V 81 (174)
T 2jwp_A 7 IWAVNAGGES-HVD-VHGIHYRKDPLEGRVGRASDYGMKLPILRSNPEDQVLYQTERYNE---DSFGYDIPIKEEGEYVL 81 (174)
T ss_dssp EEEEEETSSS-EEE-TTTEEECSSCSSTTCCCCCCCCTTSCCSSSCHHHHHTTTCCCCCC---SCEEEEEECCSCEEEEE
T ss_pred EEEEECCCCC-ccC-CCCCEEcCCcCcccCCcccccccceEecccCCCCchhhhhhccCC---CCeEEEEEeCCCeEEEE
Confidence 4789999765 455 67999999998864453221111 0 01234689999998 47899999999999999
Q ss_pred EEEEeecCCCCCCCCCcEEEEEcCce-eEEEEecC---CccceEEEEEEe-------------cCCCCcccceeecCCCC
Q 002358 98 RATFQYGSLGSEASYPKFQLYLDATL-WSTVTVLD---ASRVYAKEMIIR-------------APSDSIDVCICCAVTGS 160 (931)
Q Consensus 98 r~~f~yg~yd~~~~~~~fd~~~~~~~-w~~v~~~~---~~~~~~~e~~~~-------------~~~~~~~vcl~~~~~~~ 160 (931)
|..|.--.|.+ .....||++++|.. ....++.. ....+..+..+. ..+..+.|.|.....+.
T Consensus 82 rLhF~ei~~~~-~~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~~~g~L~I~f~p~~~~~ 160 (174)
T 2jwp_A 82 VLKFAEVYFAQ-SQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTGKLSVEFVKGYYDN 160 (174)
T ss_dssp EEEEECCSCCC-SSSSCEEEEETTEEEEEEECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEECCSEEEEEEECSSSCS
T ss_pred EEEEeccccCC-CCCeEeEEEECCEEeecCcCHHHhhCCCeeEEEEEEEEEecCceeeeeeecccCCeEEEEEeccCCCC
Confidence 99998776654 56679999999965 23333321 223454555554 24556888887654668
Q ss_pred ceeeeeeeeec
Q 002358 161 PFISTLELRPL 171 (931)
Q Consensus 161 pfis~le~~~l 171 (931)
||||+||+.+-
T Consensus 161 a~inaIEI~~~ 171 (174)
T 2jwp_A 161 PKVCALFIMKG 171 (174)
T ss_dssp SSEEEEEEESS
T ss_pred cEEEEEEEEeC
Confidence 99999999874
No 274
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.28 E-value=3.6e-12 Score=127.29 Aligned_cols=102 Identities=23% Similarity=0.265 Sum_probs=89.6
Q ss_pred CCCceEEeeCC--------CCCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCc
Q 002358 400 VPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENN 470 (931)
Q Consensus 400 ~~w~~v~c~~~--------~~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N 470 (931)
|.|+.+.|+.. .+.+++.|+|++|+|++..|..|++|++|+.|+|++|+|++.+|. |.+|++|+.|+|++|
T Consensus 9 C~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 9 CSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cCCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 46777877643 245799999999999988899999999999999999999999885 799999999999999
Q ss_pred cccCCCCCccCCccccccccccccCCCCCCC
Q 002358 471 ELTGSLPSYMGSLPNLQELHIENNSFVGEIP 501 (931)
Q Consensus 471 ~l~g~iP~~l~~l~~L~~l~l~~N~l~g~iP 501 (931)
+|++..|..+.++++|+.|+|++|.+++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9996666679999999999999999985543
No 275
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.28 E-value=4.9e-12 Score=131.91 Aligned_cols=119 Identities=23% Similarity=0.247 Sum_probs=100.8
Q ss_pred CCCceEEeeCC--------CCCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCc
Q 002358 400 VPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENN 470 (931)
Q Consensus 400 ~~w~~v~c~~~--------~~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N 470 (931)
|.|..+.|+.. .+++++.|+|++|+|++..+..|.++++|+.|+|++|+|++..| .|.+|++|+.|+|++|
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 46788888643 23579999999999997777799999999999999999999988 5999999999999999
Q ss_pred cccCCCCC-ccCCccccccccccccCCCCCCCccccc--CceeeeecCCCCc
Q 002358 471 ELTGSLPS-YMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPKL 519 (931)
Q Consensus 471 ~l~g~iP~-~l~~l~~L~~l~l~~N~l~g~iP~~~~~--~~~~l~~~~N~~~ 519 (931)
+|+ .+|. .+..+++|+.|+|++|+|++..|..+.. .+..+.+++|...
T Consensus 91 ~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 141 (220)
T 2v9t_B 91 KIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ 141 (220)
T ss_dssp CCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred cCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCC
Confidence 999 5555 5789999999999999999655555543 6788888888654
No 276
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.26 E-value=8.5e-12 Score=135.86 Aligned_cols=110 Identities=27% Similarity=0.325 Sum_probs=97.6
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
.++++.|+|++|+|++..|..|.+|++|+.|+|++|+|++.++. |..+++|+.|+|++|+|++..+..+.++++|+.|+
T Consensus 99 l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~ 178 (290)
T 1p9a_G 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLL 178 (290)
T ss_dssp CTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEE
Confidence 46899999999999976678899999999999999999998885 78999999999999999944444568899999999
Q ss_pred ccccCCCCCCCccccc--CceeeeecCCCCcccc
Q 002358 491 IENNSFVGEIPPALLT--GKVIFKYDNNPKLHKE 522 (931)
Q Consensus 491 l~~N~l~g~iP~~~~~--~~~~l~~~~N~~~c~~ 522 (931)
|++|+|+ .+|..++. .+..+.+.+||+.|..
T Consensus 179 L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 179 LQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 9999999 99998876 5778889999999863
No 277
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.25 E-value=7.1e-12 Score=130.70 Aligned_cols=123 Identities=15% Similarity=0.182 Sum_probs=103.5
Q ss_pred CCCCCCCceEEeeCCC--------CCcEEEEEeCCCCCcccCCc-cccCccccceecccCCcCCCCCC-CccccccccEe
Q 002358 396 PCVPVPWEWVTCSTTT--------PPRITKIALSGKNLKGEIPP-ELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIV 465 (931)
Q Consensus 396 pc~~~~w~~v~c~~~~--------~~~l~~L~L~~n~l~g~ip~-~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L 465 (931)
.|. |.|..+.|+... +..++.|+|++|+|++..|. .|.++++|+.|+|++|+|++..| .|.++++|+.|
T Consensus 8 ~C~-C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 86 (220)
T 2v70_A 8 KCR-CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEI 86 (220)
T ss_dssp TCE-EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCE-ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEE
Confidence 343 567878886532 34688999999999977664 58999999999999999999998 69999999999
Q ss_pred ecCCccccCCCCCccCCccccccccccccCCCCCCCccccc--CceeeeecCCCCc
Q 002358 466 HLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPKL 519 (931)
Q Consensus 466 ~L~~N~l~g~iP~~l~~l~~L~~l~l~~N~l~g~iP~~~~~--~~~~l~~~~N~~~ 519 (931)
+|++|+|++..|..++.+++|+.|+|++|+|++..|..+.. .+..+.+++|...
T Consensus 87 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 142 (220)
T 2v70_A 87 LLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQIT 142 (220)
T ss_dssp ECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCC
T ss_pred ECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCC
Confidence 99999999777778999999999999999999666766643 6778888888654
No 278
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.25 E-value=4.3e-12 Score=141.55 Aligned_cols=102 Identities=20% Similarity=0.226 Sum_probs=89.8
Q ss_pred EEeCCC-CCcccCCccccCccccceecccC-CcCCCCCC-CccccccccEeecCCccccCCCCCccCCcccccccccccc
Q 002358 418 IALSGK-NLKGEIPPELKNMEALTELWLDG-NFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 494 (931)
Q Consensus 418 L~L~~n-~l~g~ip~~~~~L~~L~~L~Ls~-N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l~~N 494 (931)
++++++ +|+ .||. |..+++|+.|+|++ |+|++.+| .|.+|++|+.|+|++|+|+|..|..|++|++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 466676 888 6898 99999999999996 99999998 5999999999999999999888889999999999999999
Q ss_pred CCCCCCCccccc--CceeeeecCCCCcccc
Q 002358 495 SFVGEIPPALLT--GKVIFKYDNNPKLHKE 522 (931)
Q Consensus 495 ~l~g~iP~~~~~--~~~~l~~~~N~~~c~~ 522 (931)
+|+ .+|..++. .+..+.+.+|++.|..
T Consensus 91 ~l~-~~~~~~~~~~~L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 91 ALE-SLSWKTVQGLSLQELVLSGNPLHCSC 119 (347)
T ss_dssp CCS-CCCSTTTCSCCCCEEECCSSCCCCCG
T ss_pred ccc-eeCHHHcccCCceEEEeeCCCccCCC
Confidence 999 78877665 4778889999998863
No 279
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.24 E-value=1.5e-11 Score=130.75 Aligned_cols=109 Identities=21% Similarity=0.264 Sum_probs=95.6
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
.++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..++.+++|+.|+
T Consensus 82 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 161 (251)
T 3m19_A 82 LTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLS 161 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEE
Confidence 36899999999999977777889999999999999999998885 79999999999999999966666899999999999
Q ss_pred ccccCCCCCCCc-ccc--cCceeeeecCCCCccc
Q 002358 491 IENNSFVGEIPP-ALL--TGKVIFKYDNNPKLHK 521 (931)
Q Consensus 491 l~~N~l~g~iP~-~~~--~~~~~l~~~~N~~~c~ 521 (931)
|++|+|+ .+|. .+. ..+..+.+.+|++.|.
T Consensus 162 L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 162 LSTNQLQ-SVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCS-CCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCCcCC-ccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9999999 5555 443 3678899999999875
No 280
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.22 E-value=2.4e-11 Score=125.20 Aligned_cols=109 Identities=21% Similarity=0.286 Sum_probs=94.7
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
.++|+.|+|++|++++..+..|.++++|++|+|++|+|++.++. +.++++|+.|+|++|+|++..|..++++++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 35899999999999965556689999999999999999998885 79999999999999999966666789999999999
Q ss_pred ccccCCCCCCCcccc---cCceeeeecCCCCccc
Q 002358 491 IENNSFVGEIPPALL---TGKVIFKYDNNPKLHK 521 (931)
Q Consensus 491 l~~N~l~g~iP~~~~---~~~~~l~~~~N~~~c~ 521 (931)
|++|+++ .+|...+ ..+..+.+++|++.|.
T Consensus 131 l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~ 163 (208)
T 2o6s_A 131 LYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCT 163 (208)
T ss_dssp CCSSCCS-CCCTTTTTTCTTCCEEECCSCCBCCC
T ss_pred CCCCccc-eeCHHHhccCCCccEEEecCCCeecC
Confidence 9999999 5666543 3778889999998875
No 281
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.21 E-value=8.5e-12 Score=127.15 Aligned_cols=91 Identities=22% Similarity=0.341 Sum_probs=86.4
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
.++|+.|+|++|+|++..|..|+++++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++.+|..++.+++|+.|+
T Consensus 53 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 132 (192)
T 1w8a_A 53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLN 132 (192)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEE
T ss_pred CCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEE
Confidence 46899999999999999999999999999999999999999995 99999999999999999999999999999999999
Q ss_pred ccccCCCCCCCc
Q 002358 491 IENNSFVGEIPP 502 (931)
Q Consensus 491 l~~N~l~g~iP~ 502 (931)
|++|.+++..+.
T Consensus 133 L~~N~l~c~c~l 144 (192)
T 1w8a_A 133 LASNPFNCNCHL 144 (192)
T ss_dssp CTTCCBCCSGGG
T ss_pred eCCCCccCcCcc
Confidence 999999987764
No 282
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.20 E-value=3.3e-11 Score=129.76 Aligned_cols=111 Identities=18% Similarity=0.162 Sum_probs=96.9
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
.++|+.|+|++|++++..|..|+++++|+.|+|++|+|++.+|. +.++++|+.|+|++|+|++..|..++.+++|+.|+
T Consensus 108 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 187 (272)
T 3rfs_A 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLR 187 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEE
Confidence 36899999999999977777799999999999999999998885 79999999999999999977777789999999999
Q ss_pred ccccCCCCCCCcccc--cCceeeeecCCCCcccc
Q 002358 491 IENNSFVGEIPPALL--TGKVIFKYDNNPKLHKE 522 (931)
Q Consensus 491 l~~N~l~g~iP~~~~--~~~~~l~~~~N~~~c~~ 522 (931)
|++|++++..|..+. ..+..+.+.+|++.|..
T Consensus 188 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 221 (272)
T 3rfs_A 188 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 221 (272)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCCCcCCccCHHHHhCCcCCCEEEccCCCccccC
Confidence 999999965444333 37888999999988753
No 283
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.20 E-value=1e-11 Score=123.32 Aligned_cols=105 Identities=22% Similarity=0.266 Sum_probs=90.4
Q ss_pred CCcEEEEEeCCCCCc-ccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~-g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
+++|+.|+|++|+++ |.+|..+..+++|+.|+|++|+|++. +.+..+++|+.|+|++|++++.+|..++++++|+.|+
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 468999999999998 89999999999999999999999988 7899999999999999999987888888899999999
Q ss_pred ccccCCCCCCC--cccc--cCceeeeecCCCC
Q 002358 491 IENNSFVGEIP--PALL--TGKVIFKYDNNPK 518 (931)
Q Consensus 491 l~~N~l~g~iP--~~~~--~~~~~l~~~~N~~ 518 (931)
|++|+++ .+| ..+. ..+..+.+++|+.
T Consensus 102 Ls~N~l~-~~~~~~~l~~l~~L~~L~l~~N~l 132 (168)
T 2ell_A 102 LSGNKLK-DISTLEPLKKLECLKSLDLFNCEV 132 (168)
T ss_dssp CBSSSCC-SSGGGGGGSSCSCCCEEECCSSGG
T ss_pred ccCCccC-cchhHHHHhcCCCCCEEEeeCCcC
Confidence 9999998 555 3443 2667777888864
No 284
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.19 E-value=7.9e-12 Score=121.56 Aligned_cols=104 Identities=19% Similarity=0.252 Sum_probs=89.5
Q ss_pred CcEEEEEeCCCCCc-ccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 413 PRITKIALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 413 ~~l~~L~L~~n~l~-g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
++++.|+|++|+++ |.+|..+..+++|+.|+|++|+|++. +.+.++++|+.|+|++|++++.+|..++.+++|+.|+|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 57999999999998 89999999999999999999999988 77999999999999999999778888888999999999
Q ss_pred cccCCCCCCC--ccccc--CceeeeecCCCC
Q 002358 492 ENNSFVGEIP--PALLT--GKVIFKYDNNPK 518 (931)
Q Consensus 492 ~~N~l~g~iP--~~~~~--~~~~l~~~~N~~ 518 (931)
++|++++ +| ..+.. .+..+.+++|+.
T Consensus 96 s~N~i~~-~~~~~~~~~l~~L~~L~l~~N~l 125 (149)
T 2je0_A 96 SGNKIKD-LSTIEPLKKLENLKSLDLFNCEV 125 (149)
T ss_dssp TTSCCCS-HHHHGGGGGCTTCCEEECTTCGG
T ss_pred CCCcCCC-hHHHHHHhhCCCCCEEeCcCCcc
Confidence 9999984 43 44433 677788888854
No 285
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.18 E-value=1.8e-11 Score=135.78 Aligned_cols=107 Identities=16% Similarity=0.239 Sum_probs=94.3
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
.++|+.|+|++|+|+ .+|..++++++|+.|+|++|++++.++.++++++|+.|+|++|++.+.+|..++++++|+.|+|
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L 260 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLIL 260 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEEC
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEEC
Confidence 358999999999998 8999999999999999999999987778999999999999999999999999999999999999
Q ss_pred cccCCCCCCCccccc--CceeeeecCCCCc
Q 002358 492 ENNSFVGEIPPALLT--GKVIFKYDNNPKL 519 (931)
Q Consensus 492 ~~N~l~g~iP~~~~~--~~~~l~~~~N~~~ 519 (931)
++|++.+.+|..+.. .+..+.+++|+..
T Consensus 261 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 290 (328)
T 4fcg_A 261 KDCSNLLTLPLDIHRLTQLEKLDLRGCVNL 290 (328)
T ss_dssp TTCTTCCBCCTTGGGCTTCCEEECTTCTTC
T ss_pred CCCCchhhcchhhhcCCCCCEEeCCCCCch
Confidence 999999899987654 6778888888754
No 286
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.18 E-value=3.2e-11 Score=120.91 Aligned_cols=90 Identities=19% Similarity=0.272 Sum_probs=81.1
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
+.+++.|+|++|+|++..|..|++|++|+.|+|++|+|++.++. |.+|++|+.|+|++|+|++..|..++.+++|+.|+
T Consensus 32 ~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~ 111 (174)
T 2r9u_A 32 PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIY 111 (174)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEE
Confidence 45799999999999988899999999999999999999998886 79999999999999999955455699999999999
Q ss_pred ccccCCCCCCCc
Q 002358 491 IENNSFVGEIPP 502 (931)
Q Consensus 491 l~~N~l~g~iP~ 502 (931)
|++|.+. ..|.
T Consensus 112 L~~N~~~-c~~~ 122 (174)
T 2r9u_A 112 LYNNPWD-CECR 122 (174)
T ss_dssp CCSSCBC-TTBG
T ss_pred eCCCCcc-cccc
Confidence 9999998 4444
No 287
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.18 E-value=4e-11 Score=127.39 Aligned_cols=106 Identities=23% Similarity=0.289 Sum_probs=90.0
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
+++++.|+|++|++++..|..|+++++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..++.+++|+.|+
T Consensus 34 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 113 (251)
T 3m19_A 34 PADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLY 113 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEE
Confidence 45789999999999988888899999999999999999998885 89999999999999999966667789999999999
Q ss_pred ccccCCCCCCCcccc---cCceeeeecCCCC
Q 002358 491 IENNSFVGEIPPALL---TGKVIFKYDNNPK 518 (931)
Q Consensus 491 l~~N~l~g~iP~~~~---~~~~~l~~~~N~~ 518 (931)
|++|+|+ .+|...+ ..+..+.+++|..
T Consensus 114 L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l 143 (251)
T 3m19_A 114 LGGNQLK-SLPSGVFDRLTKLKELRLNTNQL 143 (251)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECCSSCC
T ss_pred cCCCcCC-CcChhHhccCCcccEEECcCCcC
Confidence 9999999 6666543 3677777888754
No 288
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.17 E-value=4.6e-11 Score=128.44 Aligned_cols=110 Identities=22% Similarity=0.282 Sum_probs=97.6
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
.++|+.|+|++|.+++..|..|+++++|+.|+|++|+|++.++. |.++++|+.|+|++|++++..|..+.++++|+.|+
T Consensus 108 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 187 (270)
T 2o6q_A 108 LVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLK 187 (270)
T ss_dssp CSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred ccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEE
Confidence 35899999999999977777899999999999999999998885 89999999999999999966666799999999999
Q ss_pred ccccCCCCCCCccccc---CceeeeecCCCCcccc
Q 002358 491 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 522 (931)
Q Consensus 491 l~~N~l~g~iP~~~~~---~~~~l~~~~N~~~c~~ 522 (931)
|++|+++ .+|...+. .+..+.+.+||+.|..
T Consensus 188 L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 188 LDNNQLK-RVPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp CCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred CCCCcCC-cCCHHHhccccCCCEEEecCCCeeCCC
Confidence 9999999 67765443 6778999999999864
No 289
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.17 E-value=2.1e-11 Score=146.60 Aligned_cols=111 Identities=16% Similarity=0.178 Sum_probs=99.5
Q ss_pred CCcEEEEEeCCCCCc-ccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCccccccc
Q 002358 412 PPRITKIALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 489 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~-g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l 489 (931)
.+.++.|+|++|++. +.+|..|..|++|+.|+|++|+|++.+| .|.+|++|+.|+|++|+|++..|..++.|++|+.|
T Consensus 468 ~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L 547 (635)
T 4g8a_A 468 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 547 (635)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEE
T ss_pred chhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEE
Confidence 468999999999854 4578889999999999999999999999 59999999999999999998888889999999999
Q ss_pred cccccCCCCCCCcccc---cCceeeeecCCCCcccc
Q 002358 490 HIENNSFVGEIPPALL---TGKVIFKYDNNPKLHKE 522 (931)
Q Consensus 490 ~l~~N~l~g~iP~~~~---~~~~~l~~~~N~~~c~~ 522 (931)
+|++|+|++..|..+. ..+..+.+++||+.|.+
T Consensus 548 ~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 548 DYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp ECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred ECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 9999999977777664 36788999999999974
No 290
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.16 E-value=2.6e-11 Score=143.71 Aligned_cols=117 Identities=17% Similarity=0.200 Sum_probs=101.2
Q ss_pred CCCceEEeeCCC----------CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecC
Q 002358 400 VPWEWVTCSTTT----------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLE 468 (931)
Q Consensus 400 ~~w~~v~c~~~~----------~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~ 468 (931)
|+|.|+ |+|+. +++|+.|+|++|++++..|..|+++++|++|+|++|++++.+| .|.++++|++|+|+
T Consensus 4 C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls 82 (549)
T 2z81_A 4 CDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLS 82 (549)
T ss_dssp ECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred CCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECC
Confidence 579998 98752 3589999999999998889999999999999999999999988 59999999999999
Q ss_pred CccccCCCCCccCCccccccccccccCCCC-CCCccccc--CceeeeecCCC
Q 002358 469 NNELTGSLPSYMGSLPNLQELHIENNSFVG-EIPPALLT--GKVIFKYDNNP 517 (931)
Q Consensus 469 ~N~l~g~iP~~l~~l~~L~~l~l~~N~l~g-~iP~~~~~--~~~~l~~~~N~ 517 (931)
+|++++..|..++++++|+.|+|++|++++ .+|..+.. .+..+.+++|.
T Consensus 83 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 134 (549)
T 2z81_A 83 DNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVE 134 (549)
T ss_dssp TSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS
T ss_pred CCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCc
Confidence 999997777779999999999999999985 45555533 67777787776
No 291
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.15 E-value=4.7e-11 Score=128.34 Aligned_cols=127 Identities=22% Similarity=0.339 Sum_probs=95.3
Q ss_pred CCCCCCCCCC-CCceEEeeCC--------CCCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccc
Q 002358 391 NDRGDPCVPV-PWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLI 460 (931)
Q Consensus 391 ~w~~dpc~~~-~w~~v~c~~~--------~~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~ 460 (931)
.|.|..|.+. .|..+.|+.. .++.++.|+|++|++++..+..|+++++|++|+|++|+|++.++. |.+++
T Consensus 6 ~~~~~~C~c~~~~~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~ 85 (270)
T 2o6q_A 6 KKDGGVCSCNNNKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELK 85 (270)
T ss_dssp GGGTCSBEEETTTTEEECTTSCCSSCCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCT
T ss_pred CCCCCCCEeCCCCCEEEccCCCCCccCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCC
Confidence 4556666332 3455555432 134688999999999866666899999999999999999987775 68899
Q ss_pred cccEeecCCccccCCCCCccCCccccccccccccCCCCCCCcccc---cCceeeeecCCCC
Q 002358 461 DLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL---TGKVIFKYDNNPK 518 (931)
Q Consensus 461 ~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l~~N~l~g~iP~~~~---~~~~~l~~~~N~~ 518 (931)
+|+.|+|++|++++..+..+.++++|+.|+|++|+++ .+|...+ ..+..+.+++|..
T Consensus 86 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l 145 (270)
T 2o6q_A 86 NLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNEL 145 (270)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccC-eeCHHHhCcCcCCCEEECCCCcC
Confidence 9999999999999655567788999999999999998 4554432 3677777877753
No 292
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.15 E-value=2.5e-11 Score=145.86 Aligned_cols=106 Identities=15% Similarity=0.064 Sum_probs=91.7
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
|+.++.|+|++|+|++..|..|.+|++|++|+|++|+|++.+| .|.+|++|++|+|++|+|++..|..|++|++|+.|+
T Consensus 51 p~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 51 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred CcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 4589999999999997777889999999999999999999988 599999999999999999955556789999999999
Q ss_pred ccccCCCCCCCcccc---cCceeeeecCCCC
Q 002358 491 IENNSFVGEIPPALL---TGKVIFKYDNNPK 518 (931)
Q Consensus 491 l~~N~l~g~iP~~~~---~~~~~l~~~~N~~ 518 (931)
|++|+|+ .+|+..+ ..+..+.+++|..
T Consensus 131 Ls~N~l~-~l~~~~~~~L~~L~~L~Ls~N~l 160 (635)
T 4g8a_A 131 AVETNLA-SLENFPIGHLKTLKELNVAHNLI 160 (635)
T ss_dssp CTTSCCC-CSTTCCCTTCTTCCEEECCSSCC
T ss_pred CCCCcCC-CCChhhhhcCcccCeeccccCcc
Confidence 9999999 5665433 2677788888864
No 293
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.12 E-value=4.9e-11 Score=137.85 Aligned_cols=111 Identities=20% Similarity=0.235 Sum_probs=99.2
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
.++|+.|+|++|.+++..|..|+++++|+.|+|++|+|++.+| .+.++++|+.|+|++|++++..|..++.+++|+.|+
T Consensus 298 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 377 (455)
T 3v47_A 298 FTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELA 377 (455)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEE
Confidence 4689999999999998889999999999999999999999888 589999999999999999988899999999999999
Q ss_pred ccccCCCCCCCcccc---cCceeeeecCCCCccccc
Q 002358 491 IENNSFVGEIPPALL---TGKVIFKYDNNPKLHKES 523 (931)
Q Consensus 491 l~~N~l~g~iP~~~~---~~~~~l~~~~N~~~c~~~ 523 (931)
|++|+|+ .+|...+ ..+..+.+++|+..|..+
T Consensus 378 L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 378 LDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCccc-cCCHhHhccCCcccEEEccCCCcccCCC
Confidence 9999999 5776553 377888999999988643
No 294
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.10 E-value=7.4e-12 Score=146.55 Aligned_cols=107 Identities=21% Similarity=0.191 Sum_probs=95.2
Q ss_pred CcEEEEEeCCCCCcccCCcccc-CccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELK-NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~-~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
++|+.|+|++|.|++.+|..+. +|++|+.|+|++|.|++. |.+..+++|+.|+|++|+|++ +|..++.+++|+.|+|
T Consensus 144 ~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~L 221 (487)
T 3oja_A 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISL 221 (487)
T ss_dssp SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEEC
T ss_pred CCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEe
Confidence 5899999999999999999887 899999999999999988 545579999999999999995 6666999999999999
Q ss_pred cccCCCCCCCccccc--CceeeeecCCCCcccc
Q 002358 492 ENNSFVGEIPPALLT--GKVIFKYDNNPKLHKE 522 (931)
Q Consensus 492 ~~N~l~g~iP~~~~~--~~~~l~~~~N~~~c~~ 522 (931)
++|+|+ .+|..+.. .+..+.+++|+..|..
T Consensus 222 s~N~l~-~lp~~l~~l~~L~~L~l~~N~l~c~~ 253 (487)
T 3oja_A 222 RNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGT 253 (487)
T ss_dssp TTSCCC-EECTTCCCCTTCCEEECTTCCBCHHH
T ss_pred cCCcCc-ccchhhccCCCCCEEEcCCCCCcCcc
Confidence 999999 58887643 7788999999999853
No 295
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.10 E-value=6.6e-11 Score=132.31 Aligned_cols=116 Identities=21% Similarity=0.264 Sum_probs=98.9
Q ss_pred CCCCceEEeeCCC----------CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeec
Q 002358 399 PVPWEWVTCSTTT----------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHL 467 (931)
Q Consensus 399 ~~~w~~v~c~~~~----------~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L 467 (931)
+|+|.++ |+|+. +++|+.|+|++|++++..+..|.++++|+.|+|++|++++..| .|.++++|+.|+|
T Consensus 29 ~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 29 SCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp EECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 4578887 88752 3489999999999997666689999999999999999999988 5999999999999
Q ss_pred CCccccCCCCC-ccCCccccccccccccCCCCCCCc-ccc---cCceeeeecCCC
Q 002358 468 ENNELTGSLPS-YMGSLPNLQELHIENNSFVGEIPP-ALL---TGKVIFKYDNNP 517 (931)
Q Consensus 468 ~~N~l~g~iP~-~l~~l~~L~~l~l~~N~l~g~iP~-~~~---~~~~~l~~~~N~ 517 (931)
++|+++ .+|. .++++++|+.|+|++|+++ .+|. ..+ ..+..+.+++|.
T Consensus 108 s~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~ 160 (353)
T 2z80_A 108 SYNYLS-NLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMD 160 (353)
T ss_dssp CSSCCS-SCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESS
T ss_pred CCCcCC-cCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCc
Confidence 999999 4555 4899999999999999999 7887 333 367778888874
No 296
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.10 E-value=6.8e-11 Score=129.28 Aligned_cols=111 Identities=16% Similarity=0.169 Sum_probs=99.5
Q ss_pred CCcEEEEEeCCCCCcc-cCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCccccccc
Q 002358 412 PPRITKIALSGKNLKG-EIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 489 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g-~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l 489 (931)
.++|+.|+|++|.+++ .+|..+.++++|+.|+|++|+|++.+| .+.++++|+.|+|++|++++..+..+..+++|+.|
T Consensus 149 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 228 (306)
T 2z66_A 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 228 (306)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEE
T ss_pred CcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEe
Confidence 3689999999999997 689999999999999999999999988 59999999999999999997666689999999999
Q ss_pred cccccCCCCCCCccccc---CceeeeecCCCCcccc
Q 002358 490 HIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 522 (931)
Q Consensus 490 ~l~~N~l~g~iP~~~~~---~~~~l~~~~N~~~c~~ 522 (931)
+|++|++++..|..+.. .+..+.+++|+..|..
T Consensus 229 ~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 229 DYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp ECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred ECCCCCCcccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 99999999888877653 6778999999988753
No 297
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.10 E-value=5.7e-11 Score=128.57 Aligned_cols=110 Identities=19% Similarity=0.278 Sum_probs=97.0
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
.++|+.|+|++|.+++..+..|+++++|+.|+|++|+|++.++. +.++++|+.|+|++|++++..|..++++++|+.|+
T Consensus 128 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 207 (285)
T 1ozn_A 128 LAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLY 207 (285)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEee
Confidence 36899999999999966666799999999999999999998884 99999999999999999988899999999999999
Q ss_pred ccccCCCCCCCcc-cc--cCceeeeecCCCCcccc
Q 002358 491 IENNSFVGEIPPA-LL--TGKVIFKYDNNPKLHKE 522 (931)
Q Consensus 491 l~~N~l~g~iP~~-~~--~~~~~l~~~~N~~~c~~ 522 (931)
|++|++++ +|.. +. ..+..+.+++|++.|..
T Consensus 208 l~~n~l~~-~~~~~~~~l~~L~~L~l~~N~~~c~~ 241 (285)
T 1ozn_A 208 LFANNLSA-LPTEALAPLRALQYLRLNDNPWVCDC 241 (285)
T ss_dssp CCSSCCSC-CCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred CCCCcCCc-CCHHHcccCcccCEEeccCCCccCCC
Confidence 99999994 6644 33 36778999999998854
No 298
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.10 E-value=8.5e-11 Score=132.01 Aligned_cols=120 Identities=21% Similarity=0.149 Sum_probs=93.4
Q ss_pred CCCceEEeeCC--------CCCcEEEEEeCCCCCcccCCcccc-CccccceecccCCcCCCCCC-CccccccccEeecCC
Q 002358 400 VPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELK-NMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLEN 469 (931)
Q Consensus 400 ~~w~~v~c~~~--------~~~~l~~L~L~~n~l~g~ip~~~~-~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~ 469 (931)
|.+.-+.|+.. .+..++.|+|++|+|++..+..+. +|++|+.|+|++|+|++..| .|.+|++|+.|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 45666777643 134688999999999977777777 89999999999999998888 488999999999999
Q ss_pred ccccCCCCCccCCccccccccccccCCCCCCCccccc--CceeeeecCCCCc
Q 002358 470 NELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPKL 519 (931)
Q Consensus 470 N~l~g~iP~~l~~l~~L~~l~l~~N~l~g~iP~~~~~--~~~~l~~~~N~~~ 519 (931)
|+|++..+..|.+|++|+.|+|++|+|++..|..+.. .+..+.+++|...
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 149 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS 149 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC
Confidence 9998666667888999999999999998544544432 6677777777543
No 299
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.09 E-value=4e-11 Score=138.58 Aligned_cols=108 Identities=16% Similarity=0.183 Sum_probs=94.8
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC--CccccccccEeecCCccccCCCCCccCCccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP--DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 489 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p--~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l 489 (931)
+++|+.|+|++|.+++..|..|++|++|++|+|++|.+.+.++ .|.++++|++|+|++|++++..|..++++++|+.|
T Consensus 29 ~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 108 (455)
T 3v47_A 29 PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVL 108 (455)
T ss_dssp CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEE
T ss_pred CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEE
Confidence 3679999999999998889999999999999999999998775 49999999999999999998889999999999999
Q ss_pred cccccCCCCCCCcc--cc--cCceeeeecCCCCc
Q 002358 490 HIENNSFVGEIPPA--LL--TGKVIFKYDNNPKL 519 (931)
Q Consensus 490 ~l~~N~l~g~iP~~--~~--~~~~~l~~~~N~~~ 519 (931)
+|++|++++.+|.. +. ..+..+.+++|...
T Consensus 109 ~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~ 142 (455)
T 3v47_A 109 TLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIK 142 (455)
T ss_dssp ECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCC
T ss_pred eCCCCCCCccccCcccccCcccCCEEECCCCccC
Confidence 99999999766654 32 36777888888643
No 300
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.09 E-value=8.8e-11 Score=135.52 Aligned_cols=108 Identities=24% Similarity=0.335 Sum_probs=97.7
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
.++|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++..| .|.++++|+.|+|++|+|++..|..|.++++|+.|+
T Consensus 184 l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 261 (440)
T 3zyj_A 184 LSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEIN 261 (440)
T ss_dssp CSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEE
T ss_pred ccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEE
Confidence 468999999999999 777 58999999999999999999988 599999999999999999988889999999999999
Q ss_pred ccccCCCCCCCccccc---CceeeeecCCCCcccc
Q 002358 491 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 522 (931)
Q Consensus 491 l~~N~l~g~iP~~~~~---~~~~l~~~~N~~~c~~ 522 (931)
|++|+|+ .+|...+. .+..+.+++||+.|+.
T Consensus 262 L~~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 262 LAHNNLT-LLPHDLFTPLHHLERIHLHHNPWNCNC 295 (440)
T ss_dssp CTTSCCC-CCCTTTTSSCTTCCEEECCSSCEECSS
T ss_pred CCCCCCC-ccChhHhccccCCCEEEcCCCCccCCC
Confidence 9999999 67766543 6778899999999874
No 301
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.08 E-value=2.8e-10 Score=121.46 Aligned_cols=140 Identities=14% Similarity=0.072 Sum_probs=110.3
Q ss_pred HhhccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcC-CCCCcceeEEEecCCeEEEEEEecCC
Q 002358 611 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYEYMHN 689 (931)
Q Consensus 611 ~~~~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~g~~~~~~~~~lV~E~~~~ 689 (931)
+.+...++.|+.+.||++... ++.+++|+...........+.+|+++++.+. |..+.++++++...+..++||||++|
T Consensus 16 ~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G 94 (263)
T 3tm0_A 16 YRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADG 94 (263)
T ss_dssp SEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSS
T ss_pred ceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCC
Confidence 445667888888999999865 7899999986532233457899999999995 67788999999888899999999999
Q ss_pred CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhc------------------------------------------
Q 002358 690 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG------------------------------------------ 727 (931)
Q Consensus 690 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~------------------------------------------ 727 (931)
.+|.+.+.. ......++.+++++|+.||+.
T Consensus 95 ~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (263)
T 3tm0_A 95 VLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKD 166 (263)
T ss_dssp EEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSS
T ss_pred eehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCC
Confidence 999876421 112346888999999999971
Q ss_pred --------------CCCCeEecCCCCCCccccCCCceEEecccccc
Q 002358 728 --------------CNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 759 (931)
Q Consensus 728 --------------~~~~ivH~DIkp~NILld~~~~vkL~DFGla~ 759 (931)
....++|||+++.||+++++..+.|+||+.+.
T Consensus 167 ~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 167 PRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01458999999999999876556799999764
No 302
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.08 E-value=2e-10 Score=125.03 Aligned_cols=107 Identities=28% Similarity=0.348 Sum_probs=95.5
Q ss_pred CCCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCccccccc
Q 002358 411 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 489 (931)
Q Consensus 411 ~~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l 489 (931)
..++|+.|+|++|.|+ .+|..+..+++|+.|+|++|+|++.+| .|.++++|+.|+|++|+|++..|..+..+++|+.|
T Consensus 75 ~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 153 (290)
T 1p9a_G 75 TLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153 (290)
T ss_dssp CCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEE
Confidence 3468999999999999 899999999999999999999999998 49999999999999999996666678999999999
Q ss_pred cccccCCCCCCCccccc---CceeeeecCCCCc
Q 002358 490 HIENNSFVGEIPPALLT---GKVIFKYDNNPKL 519 (931)
Q Consensus 490 ~l~~N~l~g~iP~~~~~---~~~~l~~~~N~~~ 519 (931)
+|++|+|+ .+|...+. .+..+.+++|...
T Consensus 154 ~L~~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 154 SLANNNLT-ELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp ECTTSCCS-CCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCC-ccCHHHhcCcCCCCEEECCCCcCC
Confidence 99999999 78887654 6777888888754
No 303
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.08 E-value=1.1e-10 Score=129.99 Aligned_cols=103 Identities=20% Similarity=0.234 Sum_probs=85.8
Q ss_pred CCCCCCCceEEeeCC-C---------CCcEEEEEeCC-CCCcccCCccccCccccceecccCCcCCCCCCC-cccccccc
Q 002358 396 PCVPVPWEWVTCSTT-T---------PPRITKIALSG-KNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLR 463 (931)
Q Consensus 396 pc~~~~w~~v~c~~~-~---------~~~l~~L~L~~-n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~ 463 (931)
.|..|.|..+.|+.. . ..+|+.|+|++ |.|++..|..|++|++|+.|+|++|+|++.+|. |.+|++|+
T Consensus 4 ~c~~C~~~~v~~~~~n~l~~ip~l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 83 (347)
T 2ifg_A 4 ACCPHGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLS 83 (347)
T ss_dssp SSCCSSSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCC
T ss_pred cCccccCCEEEcCCCCCCCccCCCCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCC
Confidence 353457888888754 1 24699999996 999987778999999999999999999999994 89999999
Q ss_pred EeecCCccccCCCCCccCCccccccccccccCCCCC
Q 002358 464 IVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGE 499 (931)
Q Consensus 464 ~L~L~~N~l~g~iP~~l~~l~~L~~l~l~~N~l~g~ 499 (931)
.|+|++|+|++..|..+..++ |+.|+|.+|.|...
T Consensus 84 ~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 84 RLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp EEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred EEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 999999999954444555555 99999999999843
No 304
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.06 E-value=1.7e-10 Score=139.55 Aligned_cols=107 Identities=16% Similarity=0.215 Sum_probs=99.1
Q ss_pred CcEEEEEeCCCCCcccCCcccc--CccccceecccCCcCCCCCCCccccccccEeec------CCccccCCCCCccCCcc
Q 002358 413 PRITKIALSGKNLKGEIPPELK--NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHL------ENNELTGSLPSYMGSLP 484 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~--~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L------~~N~l~g~iP~~l~~l~ 484 (931)
++|+.|+|++|+|+ .+|..++ .+++|+.|+|++|+|++.++.+.++++|+.|+| ++|++.+.+|..+++|+
T Consensus 488 ~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~ 566 (636)
T 4eco_A 488 YLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCP 566 (636)
T ss_dssp GGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCS
T ss_pred CCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCCcChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCC
Confidence 38999999999999 8999998 999999999999999994447999999999999 56889999999999999
Q ss_pred ccccccccccCCCCCCCcccccCceeeeecCCCCccc
Q 002358 485 NLQELHIENNSFVGEIPPALLTGKVIFKYDNNPKLHK 521 (931)
Q Consensus 485 ~L~~l~l~~N~l~g~iP~~~~~~~~~l~~~~N~~~c~ 521 (931)
+|+.|+|++|+| +.||..+...+..+.+++|+..|-
T Consensus 567 ~L~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 567 SLTQLQIGSNDI-RKVNEKITPNISVLDIKDNPNISI 602 (636)
T ss_dssp SCCEEECCSSCC-CBCCSCCCTTCCEEECCSCTTCEE
T ss_pred CCCEEECCCCcC-CccCHhHhCcCCEEECcCCCCccc
Confidence 999999999999 699999988999999999998863
No 305
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.06 E-value=7.5e-11 Score=141.64 Aligned_cols=110 Identities=19% Similarity=0.136 Sum_probs=99.9
Q ss_pred CCcEEEEEeCCCCCcc-cCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCccccccc
Q 002358 412 PPRITKIALSGKNLKG-EIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 489 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g-~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l 489 (931)
.++|+.|+|++|.+++ .+|..|+++++|+.|+|++|++++.+| .+.++++|+.|+|++|++++.+|..++++++|+.|
T Consensus 447 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 526 (606)
T 3vq2_A 447 LTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTL 526 (606)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEE
T ss_pred CCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEE
Confidence 4689999999999998 478899999999999999999999988 49999999999999999998889999999999999
Q ss_pred cccccCCCCCCCccccc---CceeeeecCCCCcccc
Q 002358 490 HIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 522 (931)
Q Consensus 490 ~l~~N~l~g~iP~~~~~---~~~~l~~~~N~~~c~~ 522 (931)
+|++|+|+ .+|..+.. .+..+.+++||+.|..
T Consensus 527 ~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c 561 (606)
T 3vq2_A 527 DCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACIC 561 (606)
T ss_dssp ECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSS
T ss_pred ECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCC
Confidence 99999999 89987543 4788899999999864
No 306
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.06 E-value=8.3e-11 Score=123.87 Aligned_cols=125 Identities=20% Similarity=0.269 Sum_probs=99.7
Q ss_pred CCCCCCCCCCCceEEeeCC-------CCCcEEEEEeCCCCCcccCCccccCccccceecccCCc-CCCCCC-Cccccccc
Q 002358 392 DRGDPCVPVPWEWVTCSTT-------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNF-LTGPLP-DMSRLIDL 462 (931)
Q Consensus 392 w~~dpc~~~~w~~v~c~~~-------~~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~-l~g~~p-~~~~l~~L 462 (931)
|..++|.+..|.++.++|. .+++++.|+|++|++++..+..|+++++|+.|+|++|+ +++..+ .|.++++|
T Consensus 3 ~cp~~C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L 82 (239)
T 2xwt_C 3 CSSPPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKV 82 (239)
T ss_dssp CCSSSCSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTC
T ss_pred CCCCCCeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCC
Confidence 3445666544566553332 24589999999999997777789999999999999997 888887 59999999
Q ss_pred cEeecCC-ccccCCCCCccCCccccccccccccCCCCCCCccccc--Cce---eeeecCCCC
Q 002358 463 RIVHLEN-NELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKV---IFKYDNNPK 518 (931)
Q Consensus 463 ~~L~L~~-N~l~g~iP~~l~~l~~L~~l~l~~N~l~g~iP~~~~~--~~~---~l~~~~N~~ 518 (931)
+.|+|++ |+|++..|..+.++++|+.|+|++|+++ .+|. +.. .+. .+.+++|+.
T Consensus 83 ~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~~L~l~~N~~ 142 (239)
T 2xwt_C 83 THIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLK-MFPD-LTKVYSTDIFFILEITDNPY 142 (239)
T ss_dssp CEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCC-SCCC-CTTCCBCCSEEEEEEESCTT
T ss_pred cEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCc-cccc-cccccccccccEEECCCCcc
Confidence 9999999 9999655578999999999999999999 5887 322 444 778888843
No 307
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.06 E-value=1.5e-10 Score=130.08 Aligned_cols=107 Identities=22% Similarity=0.297 Sum_probs=60.4
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCcc----CCccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYM----GSLPNLQ 487 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l----~~l~~L~ 487 (931)
++|+.|+|++|.|++..+..|.+|++|+.|+|++|+|++..| .|.+|++|+.|+|++|+|+ .+|..+ ..+++|+
T Consensus 88 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L~ 166 (361)
T 2xot_A 88 PNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLM 166 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC----CTTCC
T ss_pred CCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcccCCcCC
Confidence 456666666666664444456666666666666666666555 3566666666666666666 344432 4466666
Q ss_pred cccccccCCCCCCCcccccC-----ceeeeecCCCCccc
Q 002358 488 ELHIENNSFVGEIPPALLTG-----KVIFKYDNNPKLHK 521 (931)
Q Consensus 488 ~l~l~~N~l~g~iP~~~~~~-----~~~l~~~~N~~~c~ 521 (931)
.|+|++|+|+ .+|...+.. +..+.+.+||+.|.
T Consensus 167 ~L~L~~N~l~-~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 167 LLDLSSNKLK-KLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp EEECCSSCCC-CCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred EEECCCCCCC-ccCHHHhhhccHhhcceEEecCCCccCC
Confidence 6666666666 455332221 13456677777765
No 308
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.05 E-value=1.5e-10 Score=141.93 Aligned_cols=105 Identities=27% Similarity=0.360 Sum_probs=87.3
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
...|+.|+|++|.|. .+|..+++|++|+.|+|++|+|+..+++|++|++|+.|+|++|+|+ .||.+|++|++|+.|+|
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 300 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYF 300 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEEC
T ss_pred CCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEEC
Confidence 457888999999888 8888888899999999999998843336888999999999999988 88888888999999999
Q ss_pred cccCCCCCCCccccc--CceeeeecCCCCc
Q 002358 492 ENNSFVGEIPPALLT--GKVIFKYDNNPKL 519 (931)
Q Consensus 492 ~~N~l~g~iP~~~~~--~~~~l~~~~N~~~ 519 (931)
++|.|+ .||..+.. .+..+.+++|+..
T Consensus 301 ~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~ 329 (727)
T 4b8c_D 301 FDNMVT-TLPWEFGNLCNLQFLGVEGNPLE 329 (727)
T ss_dssp CSSCCC-CCCSSTTSCTTCCCEECTTSCCC
T ss_pred CCCCCC-ccChhhhcCCCccEEeCCCCccC
Confidence 999887 88887654 6777888888754
No 309
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.05 E-value=1.8e-10 Score=124.01 Aligned_cols=107 Identities=15% Similarity=0.030 Sum_probs=91.4
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
+++++.|+|++|++++..+..|+++++|+.|+|++|++++..+ .|.++++|+.|+|++|++++..|..++++++|+.|+
T Consensus 27 ~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 3469999999999997777799999999999999999999888 599999999999999999977778899999999999
Q ss_pred ccccCCCCCCCcccc--cCceeeeecCCCC
Q 002358 491 IENNSFVGEIPPALL--TGKVIFKYDNNPK 518 (931)
Q Consensus 491 l~~N~l~g~iP~~~~--~~~~~l~~~~N~~ 518 (931)
+++|++++..+..+. ..+..+.+++|..
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 136 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLI 136 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCC
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCcc
Confidence 999999944333443 3677788888764
No 310
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.05 E-value=3.3e-10 Score=121.82 Aligned_cols=107 Identities=22% Similarity=0.271 Sum_probs=91.0
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
.++|+.|+|++|++++..+..|+++++|+.|+|++|++++.+|. +.++++|+.|+|++|+|++..|..++.+++|+.|+
T Consensus 84 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 35899999999999977777789999999999999999998885 89999999999999999976677789999999999
Q ss_pred ccccCCCCCCCccc-c--cCceeeeecCCCCc
Q 002358 491 IENNSFVGEIPPAL-L--TGKVIFKYDNNPKL 519 (931)
Q Consensus 491 l~~N~l~g~iP~~~-~--~~~~~l~~~~N~~~ 519 (931)
|++|+++ .+|... . ..+..+.+.+|...
T Consensus 164 l~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~ 194 (272)
T 3rfs_A 164 LSYNQLQ-SLPEGVFDKLTQLKDLRLYQNQLK 194 (272)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCCCcC-ccCHHHhcCCccCCEEECCCCcCC
Confidence 9999999 455543 2 36778888888644
No 311
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.04 E-value=1.6e-10 Score=137.54 Aligned_cols=101 Identities=25% Similarity=0.320 Sum_probs=72.3
Q ss_pred cEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccccccccc
Q 002358 414 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 493 (931)
Q Consensus 414 ~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l~~ 493 (931)
.++.|+|++|+|++ +|. |++|++|+.|+|++|+|+..++.+++|++|+.|+|++|+|++ +| .+++|++|+.|+|++
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 46677777777774 665 777777777778777777433357777777777887777774 66 677777777777777
Q ss_pred cCCCCCC-Cccccc--CceeeeecCCCC
Q 002358 494 NSFVGEI-PPALLT--GKVIFKYDNNPK 518 (931)
Q Consensus 494 N~l~g~i-P~~~~~--~~~~l~~~~N~~ 518 (931)
|+|++.+ |..+.. .+..+.+++|+.
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l 545 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSL 545 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGG
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcC
Confidence 7777554 666543 666677777764
No 312
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.04 E-value=1.5e-10 Score=134.10 Aligned_cols=108 Identities=23% Similarity=0.316 Sum_probs=97.2
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
.++|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++..| .|.++++|+.|+|++|++++..|..+..+++|+.|+
T Consensus 195 l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 272 (452)
T 3zyi_A 195 LFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELN 272 (452)
T ss_dssp CTTCCEEECTTSCCS-SCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccc-ccc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEE
Confidence 468999999999999 455 69999999999999999999988 599999999999999999988899999999999999
Q ss_pred ccccCCCCCCCccccc---CceeeeecCCCCcccc
Q 002358 491 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 522 (931)
Q Consensus 491 l~~N~l~g~iP~~~~~---~~~~l~~~~N~~~c~~ 522 (931)
|++|+|+ .+|...+. .+..+.+++||+.|..
T Consensus 273 L~~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 273 LAHNNLS-SLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp CCSSCCS-CCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred CCCCcCC-ccChHHhccccCCCEEEccCCCcCCCC
Confidence 9999999 67765543 6778899999999874
No 313
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.03 E-value=2.5e-10 Score=132.11 Aligned_cols=116 Identities=21% Similarity=0.245 Sum_probs=98.2
Q ss_pred CceEEeeCC--------CCCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccc
Q 002358 402 WEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNEL 472 (931)
Q Consensus 402 w~~v~c~~~--------~~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l 472 (931)
|..+.|+.. .+++++.|+|++|+|++..|..|++|++|+.|+|++|+|++..| .|.++++|+.|+|++|+|
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 455667543 24589999999999999889999999999999999999999988 599999999999999999
Q ss_pred cCCCCCccCCccccccccccccCCCCCCCccccc---CceeeeecCCCC
Q 002358 473 TGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPK 518 (931)
Q Consensus 473 ~g~iP~~l~~l~~L~~l~l~~N~l~g~iP~~~~~---~~~~l~~~~N~~ 518 (931)
++..+..++.+++|+.|+|++|+|+ .+|...+. .+..+.+++|..
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~~~~ 183 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELKK 183 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCTT
T ss_pred CccChhhhcccCCCCEEECCCCCcc-eeCHhHHhcCCcccEEeCCCCCC
Confidence 9666667999999999999999999 67765443 666777777543
No 314
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.02 E-value=2.7e-10 Score=114.10 Aligned_cols=90 Identities=22% Similarity=0.338 Sum_probs=80.3
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
.++|+.|+|++|+|++..+..|+++++|+.|+|++|+|++.++. +.++++|+.|+|++|+|++..+..+..+++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 130 (177)
T 2o6r_A 51 LTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIW 130 (177)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred cccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEE
Confidence 35899999999999966666689999999999999999999885 79999999999999999955455578999999999
Q ss_pred ccccCCCCCCC
Q 002358 491 IENNSFVGEIP 501 (931)
Q Consensus 491 l~~N~l~g~iP 501 (931)
|++|++.+..|
T Consensus 131 l~~N~~~~~~~ 141 (177)
T 2o6r_A 131 LHTNPWDCSCP 141 (177)
T ss_dssp CCSSCBCCCHH
T ss_pred ecCCCeeccCc
Confidence 99999998766
No 315
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.01 E-value=3.5e-10 Score=135.75 Aligned_cols=107 Identities=18% Similarity=0.066 Sum_probs=83.2
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
+++++.|+|++|++++..|..|+++++|++|+|++|++++..| .|.++++|+.|+|++|++++..|+.|++|++|+.|+
T Consensus 31 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 4578888888888887777788888888888888888888877 488888888888888888877788888888888888
Q ss_pred ccccCCCCCCCccccc--CceeeeecCCCC
Q 002358 491 IENNSFVGEIPPALLT--GKVIFKYDNNPK 518 (931)
Q Consensus 491 l~~N~l~g~iP~~~~~--~~~~l~~~~N~~ 518 (931)
|++|++++..|..+.. .+..+.+++|..
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 140 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFI 140 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCC
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcc
Confidence 8888887433344432 566666666654
No 316
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.01 E-value=3.4e-10 Score=140.56 Aligned_cols=105 Identities=17% Similarity=0.282 Sum_probs=96.1
Q ss_pred cEEEEEeCCCCCcccCCcccc--CccccceecccCCcCCCCCCCccccccccEeecCC------ccccCCCCCccCCccc
Q 002358 414 RITKIALSGKNLKGEIPPELK--NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLEN------NELTGSLPSYMGSLPN 485 (931)
Q Consensus 414 ~l~~L~L~~n~l~g~ip~~~~--~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~------N~l~g~iP~~l~~l~~ 485 (931)
+|+.|+|++|+|+ .+|..++ +|++|+.|+|++|+|++.++.+.+|++|+.|+|++ |++.+.+|..|++|++
T Consensus 729 ~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~ 807 (876)
T 4ecn_A 729 LLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPS 807 (876)
T ss_dssp GCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSS
T ss_pred CccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCccchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCC
Confidence 8999999999999 8999998 99999999999999999544799999999999976 8899999999999999
Q ss_pred cccccccccCCCCCCCcccccCceeeeecCCCCcc
Q 002358 486 LQELHIENNSFVGEIPPALLTGKVIFKYDNNPKLH 520 (931)
Q Consensus 486 L~~l~l~~N~l~g~iP~~~~~~~~~l~~~~N~~~c 520 (931)
|+.|+|++|+| +.||..+...+..+.+++|+...
T Consensus 808 L~~L~Ls~N~L-~~Ip~~l~~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 808 LIQLQIGSNDI-RKVDEKLTPQLYILDIADNPNIS 841 (876)
T ss_dssp CCEEECCSSCC-CBCCSCCCSSSCEEECCSCTTCE
T ss_pred CCEEECCCCCC-CccCHhhcCCCCEEECCCCCCCc
Confidence 99999999999 69999988888999999998753
No 317
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.01 E-value=4.1e-10 Score=131.09 Aligned_cols=119 Identities=22% Similarity=0.257 Sum_probs=99.7
Q ss_pred CCceEEeeCC--------CCCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCcc
Q 002358 401 PWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNE 471 (931)
Q Consensus 401 ~w~~v~c~~~--------~~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~ 471 (931)
.|..+.|... .+++++.|+|++|+|++..|..|.++++|+.|+|++|+|++..| .|.+|++|+.|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 3567777643 24589999999999998888999999999999999999999988 59999999999999999
Q ss_pred ccCCCCCccCCccccccccccccCCCCCCCccccc--CceeeeecCCCCc
Q 002358 472 LTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPKL 519 (931)
Q Consensus 472 l~g~iP~~l~~l~~L~~l~l~~N~l~g~iP~~~~~--~~~~l~~~~N~~~ 519 (931)
|++..+..++++++|+.|+|++|++++..|..+.. .+..+.+++|...
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~ 141 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV 141 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCC
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccc
Confidence 99544456899999999999999999666665543 6778888888643
No 318
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.00 E-value=4.2e-10 Score=124.45 Aligned_cols=106 Identities=23% Similarity=0.283 Sum_probs=95.4
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
++|+.|+|++|.+++..|..|.++++|+.|+|++|++++.++ .+..+++|+.|+|++|+|+ .+|..+..+++|+.|+|
T Consensus 192 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 270 (330)
T 1xku_A 192 PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYL 270 (330)
T ss_dssp TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEEC
T ss_pred ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEEC
Confidence 589999999999998889999999999999999999999988 6999999999999999999 99999999999999999
Q ss_pred cccCCCCCCCccccc---------CceeeeecCCCCcc
Q 002358 492 ENNSFVGEIPPALLT---------GKVIFKYDNNPKLH 520 (931)
Q Consensus 492 ~~N~l~g~iP~~~~~---------~~~~l~~~~N~~~c 520 (931)
++|+++ .+|...+. .+..+.+.+||..+
T Consensus 271 ~~N~i~-~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 271 HNNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp CSSCCC-CCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred CCCcCC-ccChhhcCCcccccccccccceEeecCcccc
Confidence 999999 67765542 34567789998764
No 319
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=98.99 E-value=3.4e-10 Score=115.36 Aligned_cols=88 Identities=25% Similarity=0.284 Sum_probs=80.1
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
.++|+.|+|++|.|++..+..|.+|++|+.|+|++|+|++.+| .|.+|++|+.|+|++|+|++..+..+..+++|+.|+
T Consensus 53 l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 132 (193)
T 2wfh_A 53 YKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLA 132 (193)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEE
T ss_pred ccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEE
Confidence 3589999999999997777889999999999999999999999 599999999999999999955555789999999999
Q ss_pred ccccCCCCC
Q 002358 491 IENNSFVGE 499 (931)
Q Consensus 491 l~~N~l~g~ 499 (931)
|++|.+...
T Consensus 133 L~~N~~~C~ 141 (193)
T 2wfh_A 133 IGANPLYCD 141 (193)
T ss_dssp CCSSCEECS
T ss_pred eCCCCeecC
Confidence 999999754
No 320
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=98.99 E-value=7.4e-10 Score=119.75 Aligned_cols=107 Identities=21% Similarity=0.295 Sum_probs=90.3
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCcc-ccCCCCCccCCccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNE-LTGSLPSYMGSLPNLQEL 489 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~-l~g~iP~~l~~l~~L~~l 489 (931)
+++++.|+|++|++++..+..|+++++|+.|+|++|++++..| .|.++++|+.|+|++|+ +++..|..+..+++|+.|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 4589999999999997777889999999999999999999877 59999999999999997 775558889999999999
Q ss_pred cccccCCCCCCCcccc--cCceeeeecCCCC
Q 002358 490 HIENNSFVGEIPPALL--TGKVIFKYDNNPK 518 (931)
Q Consensus 490 ~l~~N~l~g~iP~~~~--~~~~~l~~~~N~~ 518 (931)
+|++|++++..|..+. ..+..+.+++|..
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 141 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNAL 141 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcc
Confidence 9999999955555443 3677788888754
No 321
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.99 E-value=3.1e-10 Score=115.85 Aligned_cols=105 Identities=14% Similarity=0.198 Sum_probs=87.7
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
.++|+.|+|++|.+++..|..|++|++|+.|+|++|++++..| .+.++++|+.|+|++|++.+.+| .++.+++|+.|+
T Consensus 87 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~ 165 (197)
T 4ezg_A 87 LSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLN 165 (197)
T ss_dssp CTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEE
T ss_pred CCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEE
Confidence 3589999999999998889999999999999999999998777 58999999999999998444787 689999999999
Q ss_pred ccccCCCCCCCc-ccccCceeeeecCCCC
Q 002358 491 IENNSFVGEIPP-ALLTGKVIFKYDNNPK 518 (931)
Q Consensus 491 l~~N~l~g~iP~-~~~~~~~~l~~~~N~~ 518 (931)
|++|+++ .+|. .-+..+..+.+.+|+.
T Consensus 166 l~~n~i~-~~~~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 166 IQFDGVH-DYRGIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CTTBCCC-CCTTGGGCSSCCEEEECBC--
T ss_pred CCCCCCc-ChHHhccCCCCCEEEeeCccc
Confidence 9999998 4652 2234677888888863
No 322
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.98 E-value=1.7e-10 Score=130.69 Aligned_cols=108 Identities=18% Similarity=0.199 Sum_probs=97.8
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
.++|+.|+|++|.+++..|..|.++++|+.|+|++|++++..+.+..+++|+.|+|++|+++ .+|..++.+++|+.|+|
T Consensus 247 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L 325 (390)
T 3o6n_A 247 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYL 325 (390)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEEC
T ss_pred CCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEEC
Confidence 36899999999999988899999999999999999999997767889999999999999999 78888999999999999
Q ss_pred cccCCCCCCCcccccCceeeeecCCCCccc
Q 002358 492 ENNSFVGEIPPALLTGKVIFKYDNNPKLHK 521 (931)
Q Consensus 492 ~~N~l~g~iP~~~~~~~~~l~~~~N~~~c~ 521 (931)
++|+++ .+|......+..+.+++|++.|.
T Consensus 326 ~~N~i~-~~~~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 326 DHNSIV-TLKLSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp CSSCCC-CCCCCTTCCCSEEECCSSCEEHH
T ss_pred CCCccc-eeCchhhccCCEEEcCCCCccch
Confidence 999998 77766667888999999998874
No 323
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.98 E-value=2.3e-10 Score=133.88 Aligned_cols=113 Identities=16% Similarity=0.121 Sum_probs=93.2
Q ss_pred CceEEeeCCCCCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-Ccc-ccccccEeecCCccccCCCCCc
Q 002358 402 WEWVTCSTTTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMS-RLIDLRIVHLENNELTGSLPSY 479 (931)
Q Consensus 402 w~~v~c~~~~~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~-~l~~L~~L~L~~N~l~g~iP~~ 479 (931)
..++.|. ..++|+.|+|++|.|++..|..|+++++|+.|+|++|+|++.+| .+. +|++|+.|+|++|+|++. |.
T Consensus 111 l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~- 186 (487)
T 3oja_A 111 ISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG- 186 (487)
T ss_dssp CCCEEEC--CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-
T ss_pred CCCCCcc--ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-
Confidence 3444443 24689999999999999889999999999999999999999888 465 899999999999999955 44
Q ss_pred cCCccccccccccccCCCCCCCccccc--CceeeeecCCCCc
Q 002358 480 MGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPKL 519 (931)
Q Consensus 480 l~~l~~L~~l~l~~N~l~g~iP~~~~~--~~~~l~~~~N~~~ 519 (931)
+..+++|+.|+|++|+|++ +|+.+.. .+..+.+++|...
T Consensus 187 ~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 187 QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV 227 (487)
T ss_dssp CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC
T ss_pred cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCc
Confidence 4469999999999999995 6665543 6788888888654
No 324
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.98 E-value=4.2e-10 Score=135.09 Aligned_cols=129 Identities=13% Similarity=0.012 Sum_probs=100.0
Q ss_pred CCCCCCCCCC-CCceEEeeCC--------CCCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-Cccccc
Q 002358 391 NDRGDPCVPV-PWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLI 460 (931)
Q Consensus 391 ~w~~dpc~~~-~w~~v~c~~~--------~~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~ 460 (931)
.|...+|.+. .+.-+.|... -+..++.|+|++|.|++..|..|+++++|++|+|++|++++..| .|.+++
T Consensus 2 ~~~~~~C~~~~~~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~ 81 (606)
T 3t6q_A 2 TSSDQKCIEKEVNKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQH 81 (606)
T ss_dssp ----CCCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCT
T ss_pred ccccCceecccCCceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCcc
Confidence 3556667542 2333555432 24589999999999998889999999999999999999999988 599999
Q ss_pred cccEeecCCccccCCCCCccCCccccccccccccCCCCCCCcccc--cCceeeeecCCCCc
Q 002358 461 DLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL--TGKVIFKYDNNPKL 519 (931)
Q Consensus 461 ~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l~~N~l~g~iP~~~~--~~~~~l~~~~N~~~ 519 (931)
+|+.|+|++|++++..|..++++++|+.|+|++|++++..|..+. ..+..+.+++|...
T Consensus 82 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~ 142 (606)
T 3t6q_A 82 RLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHIS 142 (606)
T ss_dssp TCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCC
T ss_pred ccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCccc
Confidence 999999999999988899999999999999999999943244333 36677777777543
No 325
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.98 E-value=9.5e-10 Score=116.64 Aligned_cols=130 Identities=17% Similarity=0.090 Sum_probs=98.7
Q ss_pred ccC-ccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCC--CcceeEEEecCCeEEEEEEecCCCCH
Q 002358 616 KIG-KGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIGYCEEEHQRILVYEYMHNGTL 692 (931)
Q Consensus 616 ~LG-~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~Hpn--Iv~l~g~~~~~~~~~lV~E~~~~gsL 692 (931)
.++ .|..+.||++...+|+.+++|+.... ....+.+|+++++.+++.+ +.+++++....+..++||||++|.+|
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l 102 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 102 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence 344 56669999998877889999997643 2356889999999996545 45688888887888999999999887
Q ss_pred HHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcC--------------------------------------------
Q 002358 693 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC-------------------------------------------- 728 (931)
Q Consensus 693 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~-------------------------------------------- 728 (931)
. ... .+ ...++.++++.|+.||+..
T Consensus 103 ~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
T 1nd4_A 103 L--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF 171 (264)
T ss_dssp T--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred C--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHH
Confidence 4 221 11 2356778888888888621
Q ss_pred -----------CCCeEecCCCCCCccccCCCceEEecccccc
Q 002358 729 -----------NPGIIHRDVKSSNILLDINMRAKVSDFGLSR 759 (931)
Q Consensus 729 -----------~~~ivH~DIkp~NILld~~~~vkL~DFGla~ 759 (931)
...++|||++|.||++++++.+.|+||+.+.
T Consensus 172 ~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 172 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1229999999999999877667799999875
No 326
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.98 E-value=3.2e-10 Score=113.51 Aligned_cols=102 Identities=23% Similarity=0.256 Sum_probs=84.8
Q ss_pred CcEEEEEeCCCCCcccCCccccCcc-ccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCc-cCCcccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELKNME-ALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSY-MGSLPNLQELH 490 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~-~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~-l~~l~~L~~l~ 490 (931)
.+++.|+|++|+++ .+|. +..+. +|+.|+|++|+|++. +.+.++++|+.|+|++|+|+ .+|.. ++.+++|+.|+
T Consensus 19 ~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCccc-ccCcchhhcCCCCCEEE
Confidence 47999999999999 5654 66665 999999999999987 78999999999999999999 55654 48999999999
Q ss_pred ccccCCCCCCCc--ccc--cCceeeeecCCCCc
Q 002358 491 IENNSFVGEIPP--ALL--TGKVIFKYDNNPKL 519 (931)
Q Consensus 491 l~~N~l~g~iP~--~~~--~~~~~l~~~~N~~~ 519 (931)
|++|+|+ .+|. .+. ..+..+.+++|+..
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC
Confidence 9999996 7886 443 36778888888753
No 327
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.98 E-value=3.1e-10 Score=135.07 Aligned_cols=88 Identities=28% Similarity=0.334 Sum_probs=82.4
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCC-CCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSL-PSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~i-P~~l~~l~~L~~l~ 490 (931)
.++|+.|+|++|.|+ .+|..|++|++|+.|+|++|+|++ +|.+++|++|+.|+|++|+|++.+ |..|++|++|+.|+
T Consensus 462 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~ 539 (567)
T 1dce_A 462 LLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLN 539 (567)
T ss_dssp GTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEE
T ss_pred cccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-CcccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEE
Confidence 458999999999999 999999999999999999999999 569999999999999999999777 99999999999999
Q ss_pred ccccCCCCCCC
Q 002358 491 IENNSFVGEIP 501 (931)
Q Consensus 491 l~~N~l~g~iP 501 (931)
|++|+|++..|
T Consensus 540 L~~N~l~~~~~ 550 (567)
T 1dce_A 540 LQGNSLCQEEG 550 (567)
T ss_dssp CTTSGGGGSSS
T ss_pred ecCCcCCCCcc
Confidence 99999995544
No 328
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.96 E-value=5e-10 Score=140.00 Aligned_cols=107 Identities=16% Similarity=0.156 Sum_probs=77.6
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCC-C-CccccccccEeecCCccccCCCCCccCCccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPL-P-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 489 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~-p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l 489 (931)
+++++.|+|++|.+++..|..|++|++|+.|+|++|.+.+.+ | .|.+|++|++|+|++|++++..|+.|++|++|+.|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 467888888888888777777888888888888877666665 3 47777777777777777777677777777777777
Q ss_pred cccccCCCCCCCcc--cc--cCceeeeecCCCC
Q 002358 490 HIENNSFVGEIPPA--LL--TGKVIFKYDNNPK 518 (931)
Q Consensus 490 ~l~~N~l~g~iP~~--~~--~~~~~l~~~~N~~ 518 (931)
+|++|++++.+|.. +. ..+..+.+++|..
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l 135 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQI 135 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcc
Confidence 77777777666654 22 2556666666653
No 329
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.96 E-value=2.2e-10 Score=137.49 Aligned_cols=108 Identities=18% Similarity=0.199 Sum_probs=98.4
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
.++|+.|+|++|.+++.+|..|++|++|+.|+|++|+|++.++.+..+++|+.|+|++|+|+ .+|..++.+++|+.|+|
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L 331 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYL 331 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEEC
T ss_pred CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEEC
Confidence 36899999999999999999999999999999999999997667888999999999999999 89999999999999999
Q ss_pred cccCCCCCCCcccccCceeeeecCCCCccc
Q 002358 492 ENNSFVGEIPPALLTGKVIFKYDNNPKLHK 521 (931)
Q Consensus 492 ~~N~l~g~iP~~~~~~~~~l~~~~N~~~c~ 521 (931)
++|+|+ .+|...+..+..+.+++||+.|.
T Consensus 332 ~~N~l~-~~~~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 332 DHNSIV-TLKLSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp CSSCCC-CCCCCTTCCCSEEECCSSCEEHH
T ss_pred CCCCCC-CcChhhcCCCCEEEeeCCCCCCh
Confidence 999998 67766677888999999998875
No 330
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.96 E-value=4.8e-10 Score=133.27 Aligned_cols=111 Identities=19% Similarity=0.191 Sum_probs=97.4
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCC-CCCC-CccccccccEeecCCccccCCCCCccCCccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLT-GPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 489 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~-g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l 489 (931)
.++++.|+|++|.+.+.+|..+.++++|+.|+|++|+++ +.+| .+..+++|+.|+|++|++++..|..++++++|+.|
T Consensus 420 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 499 (570)
T 2z63_A 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 499 (570)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEE
Confidence 468999999999999999999999999999999999998 5677 59999999999999999998889999999999999
Q ss_pred cccccCCCCCCCcccc--cCceeeeecCCCCcccc
Q 002358 490 HIENNSFVGEIPPALL--TGKVIFKYDNNPKLHKE 522 (931)
Q Consensus 490 ~l~~N~l~g~iP~~~~--~~~~~l~~~~N~~~c~~ 522 (931)
+|++|++++..|..+. ..+..+.+++|++.|..
T Consensus 500 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 500 NMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred eCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 9999999965554443 36788899999998864
No 331
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.95 E-value=2e-10 Score=114.99 Aligned_cols=101 Identities=19% Similarity=0.218 Sum_probs=86.5
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCc-cccccccEeecCCccccCCCCC--ccCCccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDM-SRLIDLRIVHLENNELTGSLPS--YMGSLPNLQEL 489 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~-~~l~~L~~L~L~~N~l~g~iP~--~l~~l~~L~~l 489 (931)
++|+.|+|++|.|++. +.|+++++|+.|+|++|+|++.+|.+ ..+++|+.|+|++|+|+ .+|. .++.+++|+.|
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 4899999999999965 78999999999999999999987774 99999999999999997 7887 89999999999
Q ss_pred cccccCCCCCCCcc----cc--cCceeeeecCCC
Q 002358 490 HIENNSFVGEIPPA----LL--TGKVIFKYDNNP 517 (931)
Q Consensus 490 ~l~~N~l~g~iP~~----~~--~~~~~l~~~~N~ 517 (931)
+|++|.++ .+|.. +. ..+..+.+.+|+
T Consensus 119 ~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~ 151 (176)
T 1a9n_A 119 CILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVK 151 (176)
T ss_dssp ECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECC
T ss_pred EecCCCCC-CcHhHHHHHHHHCCccceeCCCcCC
Confidence 99999998 77774 22 245555555554
No 332
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.95 E-value=9.3e-10 Score=118.39 Aligned_cols=105 Identities=19% Similarity=0.240 Sum_probs=64.7
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
++|+.|+|++|.+++..+..|.++++|+.|+|++|+|++..| .+.++++|+.|+|++|++++..+..++++++|+.|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 456666666666665555566666666666666666666665 3666666666666666666544445666666666666
Q ss_pred cccCCCC-CCCccccc--CceeeeecCCC
Q 002358 492 ENNSFVG-EIPPALLT--GKVIFKYDNNP 517 (931)
Q Consensus 492 ~~N~l~g-~iP~~~~~--~~~~l~~~~N~ 517 (931)
++|++++ .+|..+.. .+..+.+++|.
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~ 160 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSC
T ss_pred cCCccceecCchhhccCCCCCEEECCCCC
Confidence 6666663 24554432 55555565554
No 333
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.95 E-value=2.5e-10 Score=142.71 Aligned_cols=107 Identities=22% Similarity=0.315 Sum_probs=92.2
Q ss_pred CCcEEEEEeCCCCCc-----ccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccCCCCCccCCccc
Q 002358 412 PPRITKIALSGKNLK-----GEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPN 485 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~-----g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~ 485 (931)
.++|+.|+|++|.++ +..|..|.+|++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..+. ++
T Consensus 450 ~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~ 527 (844)
T 3j0a_A 450 NPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--AN 527 (844)
T ss_dssp CTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SC
T ss_pred CCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--cc
Confidence 368999999999997 45556789999999999999999999995 89999999999999999966666665 89
Q ss_pred cccccccccCCCCCCCcccccCceeeeecCCCCccc
Q 002358 486 LQELHIENNSFVGEIPPALLTGKVIFKYDNNPKLHK 521 (931)
Q Consensus 486 L~~l~l~~N~l~g~iP~~~~~~~~~l~~~~N~~~c~ 521 (931)
|+.|+|++|+|+|.+|.. +..+..+.+++||+.|.
T Consensus 528 L~~L~Ls~N~l~~~~~~~-~~~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 528 LEILDISRNQLLAPNPDV-FVSLSVLDITHNKFICE 562 (844)
T ss_dssp CCEEEEEEECCCCCCSCC-CSSCCEEEEEEECCCCS
T ss_pred ccEEECCCCcCCCCChhH-hCCcCEEEecCCCcccc
Confidence 999999999999777765 45788899999999883
No 334
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.94 E-value=2.3e-10 Score=140.27 Aligned_cols=93 Identities=31% Similarity=0.399 Sum_probs=85.4
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
.++|+.|+|++|.|+ .+|..|++|++|+.|+|++|+|+..+.+|++|++|+.|+|++|+|+ .||.+|++|++|+.|+|
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L 323 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGV 323 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEEC
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeC
Confidence 468999999999999 9999999999999999999999955447999999999999999998 99999999999999999
Q ss_pred cccCCCCCCCccccc
Q 002358 492 ENNSFVGEIPPALLT 506 (931)
Q Consensus 492 ~~N~l~g~iP~~~~~ 506 (931)
++|+|+|.+|..+..
T Consensus 324 ~~N~l~~~~p~~~~~ 338 (727)
T 4b8c_D 324 EGNPLEKQFLKILTE 338 (727)
T ss_dssp TTSCCCSHHHHHHHH
T ss_pred CCCccCCCChHHHhh
Confidence 999999888877643
No 335
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.94 E-value=4.3e-10 Score=130.91 Aligned_cols=108 Identities=19% Similarity=0.241 Sum_probs=96.9
Q ss_pred CcEEEEEeCCCCCcccCC-ccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 413 PRITKIALSGKNLKGEIP-PELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip-~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
.+|+.|+|++|+|+ .+| ..|.++++|+.|+|++|+|++..+ .|.++++|+.|+|++|++++..|..+.++++|+.|+
T Consensus 224 ~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 302 (477)
T 2id5_A 224 LNLTSLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLN 302 (477)
T ss_dssp CCCSEEEEESSCCC-SCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEE
T ss_pred ccccEEECcCCccc-ccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEE
Confidence 37999999999999 555 679999999999999999999888 499999999999999999988899999999999999
Q ss_pred ccccCCCCCCCccccc---CceeeeecCCCCcccc
Q 002358 491 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 522 (931)
Q Consensus 491 l~~N~l~g~iP~~~~~---~~~~l~~~~N~~~c~~ 522 (931)
|++|+|+ .+|...+. .+..+.+++||+.|..
T Consensus 303 L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 303 VSGNQLT-TLEESVFHSVGNLETLILDSNPLACDC 336 (477)
T ss_dssp CCSSCCS-CCCGGGBSCGGGCCEEECCSSCEECSG
T ss_pred CCCCcCc-eeCHhHcCCCcccCEEEccCCCccCcc
Confidence 9999999 67766543 6778899999998864
No 336
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.94 E-value=6.1e-10 Score=123.32 Aligned_cols=106 Identities=22% Similarity=0.198 Sum_probs=94.6
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
++++.|+|++|.+++..|..|.++++|+.|+|++|+|++.+| .+..+++|+.|+|++|+|+ .+|..++.+++|+.|+|
T Consensus 193 ~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 271 (332)
T 2ft3_A 193 ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYL 271 (332)
T ss_dssp SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEEC
Confidence 589999999999998888899999999999999999999998 5999999999999999999 99999999999999999
Q ss_pred cccCCCCCCCccccc---------CceeeeecCCCCcc
Q 002358 492 ENNSFVGEIPPALLT---------GKVIFKYDNNPKLH 520 (931)
Q Consensus 492 ~~N~l~g~iP~~~~~---------~~~~l~~~~N~~~c 520 (931)
++|+++ .+|...+. .+..+.+.+||..+
T Consensus 272 ~~N~l~-~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~ 308 (332)
T 2ft3_A 272 HTNNIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVPY 308 (332)
T ss_dssp CSSCCC-BCCTTSSSCSSCCSSSCCBSEEECCSSSSCG
T ss_pred CCCCCC-ccChhHccccccccccccccceEeecCcccc
Confidence 999999 66654432 34567889999764
No 337
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.94 E-value=2.3e-10 Score=125.75 Aligned_cols=106 Identities=18% Similarity=0.222 Sum_probs=80.7
Q ss_pred CcEEEEEeCCCCCcccCCccc--cCccccceecccCCcCCCCCCCcccc-----ccccEeecCCccccCCCCCccCCccc
Q 002358 413 PRITKIALSGKNLKGEIPPEL--KNMEALTELWLDGNFLTGPLPDMSRL-----IDLRIVHLENNELTGSLPSYMGSLPN 485 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~--~~L~~L~~L~Ls~N~l~g~~p~~~~l-----~~L~~L~L~~N~l~g~iP~~l~~l~~ 485 (931)
++|+.|+|++|+++|.+|..+ +.+++|++|+|++|+|++.++.++++ ++|+.|+|++|++++..|+.++++++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 478888888888888888876 78888888888888888883346666 88888888888888777788888888
Q ss_pred cccccccccCCCCCC--Cccc----ccCceeeeecCCCC
Q 002358 486 LQELHIENNSFVGEI--PPAL----LTGKVIFKYDNNPK 518 (931)
Q Consensus 486 L~~l~l~~N~l~g~i--P~~~----~~~~~~l~~~~N~~ 518 (931)
|+.|+|++|++.|.+ |..+ ...+..+.+++|..
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l 213 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGM 213 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCC
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcC
Confidence 888888888877652 3332 23566777777753
No 338
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.93 E-value=1.1e-09 Score=126.17 Aligned_cols=116 Identities=19% Similarity=0.208 Sum_probs=97.3
Q ss_pred CceEEeeCC--------CCCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccc
Q 002358 402 WEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNEL 472 (931)
Q Consensus 402 w~~v~c~~~--------~~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l 472 (931)
|..+.|... .+++++.|+|++|++++..+..|.+|++|+.|+|++|+|++..+ .|.++++|+.|+|++|+|
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 456777643 24578999999999998888999999999999999999999887 599999999999999999
Q ss_pred cCCCCCccCCccccccccccccCCCCCCCccccc---CceeeeecCCCC
Q 002358 473 TGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPK 518 (931)
Q Consensus 473 ~g~iP~~l~~l~~L~~l~l~~N~l~g~iP~~~~~---~~~~l~~~~N~~ 518 (931)
++..+..+..+++|+.|+|++|+++ .+|...+. .+..+.+.+|..
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~l~~~~~ 172 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKR 172 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCTT
T ss_pred CeeCHhHhhccccCceeeCCCCccc-ccCHHHhhhCcccCEeCCCCCCC
Confidence 9555567999999999999999999 66664443 667777777543
No 339
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.93 E-value=5.8e-10 Score=133.82 Aligned_cols=110 Identities=20% Similarity=0.204 Sum_probs=86.7
Q ss_pred CCcEEEEEeCCCCCccc---CCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCccccc
Q 002358 412 PPRITKIALSGKNLKGE---IPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQ 487 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~---ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~ 487 (931)
.++|+.|+|++|.+.+. .+..+..+++|+.|+|++|++++.+| .|.++++|+.|+|++|++++.+|+.+.++++|
T Consensus 448 l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L- 526 (606)
T 3t6q_A 448 LPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI- 526 (606)
T ss_dssp CTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-
T ss_pred CCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-
Confidence 45788888888888763 23568888888888888888888877 58888888888888888888888888888888
Q ss_pred cccccccCCCCCCCcccc--cCceeeeecCCCCcccc
Q 002358 488 ELHIENNSFVGEIPPALL--TGKVIFKYDNNPKLHKE 522 (931)
Q Consensus 488 ~l~l~~N~l~g~iP~~~~--~~~~~l~~~~N~~~c~~ 522 (931)
.|+|++|++++..|..+. ..+..+.+++||+.|..
T Consensus 527 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 527 YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 888888888855554433 36778888999988853
No 340
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.93 E-value=1.1e-09 Score=121.15 Aligned_cols=115 Identities=22% Similarity=0.334 Sum_probs=97.5
Q ss_pred CCCceEEeeCC--------CCCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCc
Q 002358 400 VPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENN 470 (931)
Q Consensus 400 ~~w~~v~c~~~--------~~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N 470 (931)
|.|..+.|+.. .+++++.|+|++|++++..|..|+++++|+.|+|++|++++..| .|.++++|+.|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 46888888643 23579999999999997778899999999999999999999988 5999999999999999
Q ss_pred cccCCCCCccCCccccccccccccCCCCCCCcccc---cCceeeeecCCCC
Q 002358 471 ELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL---TGKVIFKYDNNPK 518 (931)
Q Consensus 471 ~l~g~iP~~l~~l~~L~~l~l~~N~l~g~iP~~~~---~~~~~l~~~~N~~ 518 (931)
+++ .+|..+. ++|+.|++++|+++ .+|...+ ..+..+.+++|..
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l 159 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPL 159 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCC-CCCSGGGSSCSSCCEEECCSCCC
T ss_pred cCC-ccCcccc--ccCCEEECCCCccC-ccCHhHhCCCccCCEEECCCCcc
Confidence 999 8898776 89999999999999 6776543 3677778888865
No 341
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.93 E-value=5.3e-10 Score=123.06 Aligned_cols=106 Identities=21% Similarity=0.200 Sum_probs=93.1
Q ss_pred CcEEEEEeCCCCCcccCCcccc-CccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELK-NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~-~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
++|+.|+|++|.+++..|..+. .+++|+.|+|++|+|++. |....+++|+.|+|++|+|+ .+|..+..+++|+.|+|
T Consensus 144 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L 221 (317)
T 3o53_A 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISL 221 (317)
T ss_dssp SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEEC
T ss_pred CCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccccccccCCEEECCCCcCC-cchhhhcccCcccEEEC
Confidence 5899999999999988787774 799999999999999987 55556999999999999999 57777999999999999
Q ss_pred cccCCCCCCCccccc--CceeeeecCCCCccc
Q 002358 492 ENNSFVGEIPPALLT--GKVIFKYDNNPKLHK 521 (931)
Q Consensus 492 ~~N~l~g~iP~~~~~--~~~~l~~~~N~~~c~ 521 (931)
++|+|+ .+|..+.. .+..+.+++|+..|.
T Consensus 222 ~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 222 RNNKLV-LIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp TTSCCC-EECTTCCCCTTCCEEECTTCCCBHH
T ss_pred cCCccc-chhhHhhcCCCCCEEEccCCCccCc
Confidence 999999 78887644 788899999999874
No 342
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=98.91 E-value=6e-10 Score=110.46 Aligned_cols=87 Identities=28% Similarity=0.282 Sum_probs=41.0
Q ss_pred cEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCC--CCccccccccEeecCCccccCCCC---CccCCcccccc
Q 002358 414 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPL--PDMSRLIDLRIVHLENNELTGSLP---SYMGSLPNLQE 488 (931)
Q Consensus 414 ~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~--p~~~~l~~L~~L~L~~N~l~g~iP---~~l~~l~~L~~ 488 (931)
+|+.|+|++|.+++.+|..+.++++|+.|+|++|+|++.. +.+..+++|+.|+|++|.+++..+ ..+..+++|+.
T Consensus 72 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~ 151 (168)
T 2ell_A 72 KLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTY 151 (168)
T ss_dssp SCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCE
T ss_pred CCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcE
Confidence 4455555555555444444444555555555555554432 234445555555555555552222 14444555555
Q ss_pred ccccccCCCCCCC
Q 002358 489 LHIENNSFVGEIP 501 (931)
Q Consensus 489 l~l~~N~l~g~iP 501 (931)
|++++|.+. ++|
T Consensus 152 L~l~~n~~~-~~~ 163 (168)
T 2ell_A 152 LDGYDREDQ-EAP 163 (168)
T ss_dssp ETTEETTSC-BCC
T ss_pred ecCCCCChh-hcc
Confidence 555555544 444
No 343
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.91 E-value=1.2e-09 Score=129.97 Aligned_cols=104 Identities=17% Similarity=0.207 Sum_probs=90.0
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
+++++.|+|++|++++..|..|+++++|++|+|++|+|++..| .|.++++|++|+|++|+|+ .+|.. .+++|+.|+
T Consensus 51 ~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 51 PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 4689999999999997777899999999999999999999988 4999999999999999999 88887 899999999
Q ss_pred ccccCCCC-CCCccccc--CceeeeecCCCC
Q 002358 491 IENNSFVG-EIPPALLT--GKVIFKYDNNPK 518 (931)
Q Consensus 491 l~~N~l~g-~iP~~~~~--~~~~l~~~~N~~ 518 (931)
|++|++++ .+|..+.. .+..+.+++|..
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l 158 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKF 158 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBC
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCcc
Confidence 99999985 34566543 677788888764
No 344
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.90 E-value=1.4e-09 Score=129.54 Aligned_cols=106 Identities=23% Similarity=0.329 Sum_probs=81.3
Q ss_pred CcEEEEEeCCCCCcccCCcc-ccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPE-LKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~-~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
++++.|+|++|.+++.+|.. +..+++|+.|+|++|+|++.+|. +. ++|+.|+|++|+|+ .||..+..+++|+.|+
T Consensus 403 ~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~ 479 (562)
T 3a79_B 403 SSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELN 479 (562)
T ss_dssp TTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEE
T ss_pred CCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEE
Confidence 46777777777777656554 66677777777777777666553 33 68888999999888 8998888999999999
Q ss_pred ccccCCCCCCCcccc---cCceeeeecCCCCcccc
Q 002358 491 IENNSFVGEIPPALL---TGKVIFKYDNNPKLHKE 522 (931)
Q Consensus 491 l~~N~l~g~iP~~~~---~~~~~l~~~~N~~~c~~ 522 (931)
|++|+|+ .+|...+ ..+..+.+++||+.|..
T Consensus 480 L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c 513 (562)
T 3a79_B 480 VASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTC 513 (562)
T ss_dssp CCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCH
T ss_pred CCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCc
Confidence 9999999 8888733 26677889999998863
No 345
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=98.89 E-value=1.2e-09 Score=119.33 Aligned_cols=108 Identities=19% Similarity=0.259 Sum_probs=94.1
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCC-CCC-CccccccccEeecCCccccCCCCCccCCccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTG-PLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 489 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g-~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l 489 (931)
.++|+.|+|++|.+.+..|..+.++++|+.|+|++|++++ .+| .+..+++|+.|+|++|++++..|..++++++|+.|
T Consensus 125 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 204 (306)
T 2z66_A 125 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 204 (306)
T ss_dssp CTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEE
Confidence 3589999999999999999999999999999999999998 456 59999999999999999998889999999999999
Q ss_pred cccccCCCCCCCcccc--cCceeeeecCCCCc
Q 002358 490 HIENNSFVGEIPPALL--TGKVIFKYDNNPKL 519 (931)
Q Consensus 490 ~l~~N~l~g~iP~~~~--~~~~~l~~~~N~~~ 519 (931)
+|++|++++..+..+. ..+..+.+++|...
T Consensus 205 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 236 (306)
T 2z66_A 205 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 236 (306)
T ss_dssp ECTTSCCSBCCSGGGTTCTTCCEEECTTSCCC
T ss_pred ECCCCccCccChhhccCcccCCEeECCCCCCc
Confidence 9999999944333433 37788888988754
No 346
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.89 E-value=2.2e-09 Score=118.62 Aligned_cols=115 Identities=24% Similarity=0.395 Sum_probs=91.7
Q ss_pred CCCceEEeeCC--------CCCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCc
Q 002358 400 VPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENN 470 (931)
Q Consensus 400 ~~w~~v~c~~~--------~~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N 470 (931)
|.|..+.|+.. .++.++.|+|++|++++..+..|+++++|++|+|++|++++..| .|.++++|+.|+|++|
T Consensus 31 c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 110 (330)
T 1xku_A 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 110 (330)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred CCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCC
Confidence 46777777642 24578999999999997777789999999999999999999877 5899999999999999
Q ss_pred cccCCCCCccCCccccccccccccCCCCCCCcc-cc--cCceeeeecCCCC
Q 002358 471 ELTGSLPSYMGSLPNLQELHIENNSFVGEIPPA-LL--TGKVIFKYDNNPK 518 (931)
Q Consensus 471 ~l~g~iP~~l~~l~~L~~l~l~~N~l~g~iP~~-~~--~~~~~l~~~~N~~ 518 (931)
+++ .+|..+. ++|+.|++++|+++ .+|.. +. ..+..+.+++|..
T Consensus 111 ~l~-~l~~~~~--~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l 157 (330)
T 1xku_A 111 QLK-ELPEKMP--KTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPL 157 (330)
T ss_dssp CCS-BCCSSCC--TTCCEEECCSSCCC-BBCHHHHTTCTTCCEEECCSSCC
T ss_pred cCC-ccChhhc--ccccEEECCCCccc-ccCHhHhcCCccccEEECCCCcC
Confidence 998 7888775 78999999999998 45443 32 3666777777754
No 347
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=98.89 E-value=4.3e-10 Score=109.13 Aligned_cols=88 Identities=18% Similarity=0.212 Sum_probs=78.5
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccCC-CCCccCCccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGS-LPSYMGSLPNLQEL 489 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~-iP~~l~~l~~L~~l 489 (931)
.++++.|+|++|.+++. ..++++++|+.|+|++|++++.+|. +.++++|+.|+|++|++++. .|..++.+++|+.|
T Consensus 41 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L 118 (149)
T 2je0_A 41 FEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSL 118 (149)
T ss_dssp CTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEE
T ss_pred cCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEE
Confidence 46899999999999965 8899999999999999999998885 67799999999999999962 44889999999999
Q ss_pred cccccCCCCCCCc
Q 002358 490 HIENNSFVGEIPP 502 (931)
Q Consensus 490 ~l~~N~l~g~iP~ 502 (931)
++++|++++ +|.
T Consensus 119 ~l~~N~l~~-~~~ 130 (149)
T 2je0_A 119 DLFNCEVTN-LND 130 (149)
T ss_dssp ECTTCGGGG-STT
T ss_pred eCcCCcccc-hHH
Confidence 999999994 454
No 348
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.89 E-value=2.3e-09 Score=128.74 Aligned_cols=106 Identities=19% Similarity=0.190 Sum_probs=85.3
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
.++|+.|+|++|.|++..|..|++|++|+.|+|++|.|++.++. |+++++|+.|+|++|+|++..|..|+++++|+.|+
T Consensus 98 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 177 (597)
T 3oja_B 98 AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQ 177 (597)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEE
Confidence 45788888888888877777788888888888888888877775 68888888888888888877777888888888888
Q ss_pred ccccCCCCCCCcccccCceeeeecCCCC
Q 002358 491 IENNSFVGEIPPALLTGKVIFKYDNNPK 518 (931)
Q Consensus 491 l~~N~l~g~iP~~~~~~~~~l~~~~N~~ 518 (931)
|++|.|+ .+|...+..+..+.+++|..
T Consensus 178 L~~N~l~-~~~~~~l~~L~~L~l~~n~l 204 (597)
T 3oja_B 178 LSSNRLT-HVDLSLIPSLFHANVSYNLL 204 (597)
T ss_dssp CTTSCCS-BCCGGGCTTCSEEECCSSCC
T ss_pred CcCCCCC-CcChhhhhhhhhhhcccCcc
Confidence 8888888 46666666677777776643
No 349
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.87 E-value=2.5e-09 Score=130.21 Aligned_cols=106 Identities=23% Similarity=0.293 Sum_probs=70.5
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
+++++.|+|++|++++..+..|+++++|+.|+|++|++++.+|. |+++++|++|+|++|++++..+..|+++++|++|+
T Consensus 24 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp CTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 34678888888888765556677777777777777777777774 67777777777777777733333577777777777
Q ss_pred ccccCCCCCCCccccc--CceeeeecCCC
Q 002358 491 IENNSFVGEIPPALLT--GKVIFKYDNNP 517 (931)
Q Consensus 491 l~~N~l~g~iP~~~~~--~~~~l~~~~N~ 517 (931)
|++|++++..|..+.. .+..+.+++|.
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 132 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNG 132 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCc
Confidence 7777776332333322 45555566554
No 350
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.87 E-value=1.2e-09 Score=111.51 Aligned_cols=80 Identities=15% Similarity=0.296 Sum_probs=39.3
Q ss_pred cEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCcccccccccc
Q 002358 414 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 492 (931)
Q Consensus 414 ~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l~ 492 (931)
+|+.|+|++|.++ .++.+.++++|+.|+|++|++++..| .+++|++|+.|+|++|++++..|..++.+++|+.|+|+
T Consensus 67 ~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~ 144 (197)
T 4ezg_A 67 NIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLS 144 (197)
T ss_dssp TCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECC
T ss_pred CCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEcc
Confidence 4555555555332 22344555555555555555554333 34555555555555555554444445555555555555
Q ss_pred ccC
Q 002358 493 NNS 495 (931)
Q Consensus 493 ~N~ 495 (931)
+|+
T Consensus 145 ~n~ 147 (197)
T 4ezg_A 145 YNG 147 (197)
T ss_dssp SCT
T ss_pred CCC
Confidence 554
No 351
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.85 E-value=4e-09 Score=119.39 Aligned_cols=106 Identities=19% Similarity=0.190 Sum_probs=92.0
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
.++|+.|+|++|.+++..|..|+++++|++|+|++|+|+..++. |.++++|+.|+|++|++++..|..++.+++|+.|+
T Consensus 92 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 171 (390)
T 3o6n_A 92 AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQ 171 (390)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEE
T ss_pred CCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEE
Confidence 46899999999999987788899999999999999999987776 68999999999999999977788899999999999
Q ss_pred ccccCCCCCCCcccccCceeeeecCCCC
Q 002358 491 IENNSFVGEIPPALLTGKVIFKYDNNPK 518 (931)
Q Consensus 491 l~~N~l~g~iP~~~~~~~~~l~~~~N~~ 518 (931)
|++|+++ .++...+..+..+.+++|..
T Consensus 172 l~~n~l~-~~~~~~l~~L~~L~l~~n~l 198 (390)
T 3o6n_A 172 LSSNRLT-HVDLSLIPSLFHANVSYNLL 198 (390)
T ss_dssp CCSSCCS-BCCGGGCTTCSEEECCSSCC
T ss_pred CCCCcCC-ccccccccccceeecccccc
Confidence 9999998 56766666777777777753
No 352
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.85 E-value=8.4e-10 Score=121.01 Aligned_cols=106 Identities=17% Similarity=0.196 Sum_probs=81.9
Q ss_pred CCcEEEEEeCCCCCccc--CC--ccccCccccceecccCCcCCCCCCC----ccccccccEeecCCccccCCCCCccCCc
Q 002358 412 PPRITKIALSGKNLKGE--IP--PELKNMEALTELWLDGNFLTGPLPD----MSRLIDLRIVHLENNELTGSLPSYMGSL 483 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~--ip--~~~~~L~~L~~L~Ls~N~l~g~~p~----~~~l~~L~~L~L~~N~l~g~iP~~l~~l 483 (931)
.++|+.|+|++|++.|. ++ ..++++++|++|+|++|+|+...+. +.++++|+.|+|++|+|++.+|+.++.+
T Consensus 168 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 168 FPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp CTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 45788888888888753 32 2347888888888888888654331 4678888888888888887778887777
Q ss_pred ---cccccccccccCCCCCCCcccccCceeeeecCCCC
Q 002358 484 ---PNLQELHIENNSFVGEIPPALLTGKVIFKYDNNPK 518 (931)
Q Consensus 484 ---~~L~~l~l~~N~l~g~iP~~~~~~~~~l~~~~N~~ 518 (931)
++|+.|+|++|+|+ .+|..++..+..+.+++|..
T Consensus 248 ~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l 284 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRL 284 (310)
T ss_dssp CCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCC
T ss_pred cCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcC
Confidence 58888888888888 88888877778888888864
No 353
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.85 E-value=1.2e-09 Score=128.51 Aligned_cols=107 Identities=14% Similarity=0.138 Sum_probs=87.0
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCC--CCC-CccccccccEeecCCccccCCCCCc-cCCccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTG--PLP-DMSRLIDLRIVHLENNELTGSLPSY-MGSLPNLQ 487 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g--~~p-~~~~l~~L~~L~L~~N~l~g~iP~~-l~~l~~L~ 487 (931)
.++++.|+|++|.+++.+|..++++++|+.|+|++|++++ .+| .+.++++|+.|+|++|++++.+|.. +..+++|+
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 3578888888888888888888888888888888888887 444 4788888888888888888767765 77888888
Q ss_pred cccccccCCCCCCCcccccCceeeeecCCCC
Q 002358 488 ELHIENNSFVGEIPPALLTGKVIFKYDNNPK 518 (931)
Q Consensus 488 ~l~l~~N~l~g~iP~~~~~~~~~l~~~~N~~ 518 (931)
.|+|++|++++.+|..+...+..+.+++|..
T Consensus 403 ~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l 433 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLPPRIKVLDLHSNKI 433 (520)
T ss_dssp EEECCSSCCCGGGGGSCCTTCCEEECCSSCC
T ss_pred EEECcCCCCCcchhhhhcccCCEEECCCCcc
Confidence 8888888888888877766777777777754
No 354
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.85 E-value=9.9e-10 Score=129.30 Aligned_cols=103 Identities=15% Similarity=0.124 Sum_probs=78.8
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
++++.|+|++|++++..|..|.+|++|++|+|++|+|++..| .|.+|++|++|+|++|+|+ .+|.. .+++|+.|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 478888888888886666778888888888888888888777 5788888888888888888 67776 7888888888
Q ss_pred cccCCCC-CCCccccc--CceeeeecCCCC
Q 002358 492 ENNSFVG-EIPPALLT--GKVIFKYDNNPK 518 (931)
Q Consensus 492 ~~N~l~g-~iP~~~~~--~~~~l~~~~N~~ 518 (931)
++|++++ .+|..+.. .+..+.+++|..
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l 127 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHL 127 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSC
T ss_pred cCCccccccchhhhccCCcceEEEecCccc
Confidence 8888875 46666543 666677777654
No 355
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.83 E-value=2.2e-09 Score=127.11 Aligned_cols=106 Identities=19% Similarity=0.195 Sum_probs=74.8
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccC-CCCCccCCcccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTG-SLPSYMGSLPNLQELH 490 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g-~iP~~l~~l~~L~~l~ 490 (931)
++|+.|+|++|++++..|..|++|++|++|+|++|++++.+|. |++|++|+.|+|++|++++ .+|..++++++|+.|+
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 129 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLR 129 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEE
Confidence 4677777777777776777777777777777777777777774 7777777777777777775 3566777777777777
Q ss_pred ccccCCCCCCCccccc---CceeeeecCCCC
Q 002358 491 IENNSFVGEIPPALLT---GKVIFKYDNNPK 518 (931)
Q Consensus 491 l~~N~l~g~iP~~~~~---~~~~l~~~~N~~ 518 (931)
+++|++.+.+|...+. .+..+.+.+|..
T Consensus 130 L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 130 IGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 7777755566653322 445555666643
No 356
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.82 E-value=4e-09 Score=117.78 Aligned_cols=105 Identities=20% Similarity=0.224 Sum_probs=87.1
Q ss_pred CCCCCceEEeeCCC--------CCcEEEEEeCCCCCcccCC-ccccCccccceecccCCcCCCCCC--CccccccccE-e
Q 002358 398 VPVPWEWVTCSTTT--------PPRITKIALSGKNLKGEIP-PELKNMEALTELWLDGNFLTGPLP--DMSRLIDLRI-V 465 (931)
Q Consensus 398 ~~~~w~~v~c~~~~--------~~~l~~L~L~~n~l~g~ip-~~~~~L~~L~~L~Ls~N~l~g~~p--~~~~l~~L~~-L 465 (931)
|.|.|..|.|+... +.++++|+|++|+|+ .|| ..|.+|++|+.|+|++|++.+.+| .|.+|++|+. +
T Consensus 7 C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l 85 (350)
T 4ay9_X 7 CHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIR 85 (350)
T ss_dssp SEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEE
T ss_pred cEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhh
Confidence 34567788897532 357999999999999 555 579999999999999999998877 3899998765 7
Q ss_pred ecCCccccCCCCCccCCccccccccccccCCCCCCCccc
Q 002358 466 HLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPAL 504 (931)
Q Consensus 466 ~L~~N~l~g~iP~~l~~l~~L~~l~l~~N~l~g~iP~~~ 504 (931)
.++.|+|++..|+.+..|++|+.|++++|+++ .+|+..
T Consensus 86 ~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~-~~~~~~ 123 (350)
T 4ay9_X 86 IEKANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVH 123 (350)
T ss_dssp EEEETTCCEECTTSBCCCTTCCEEEEEEECCS-SCCCCT
T ss_pred cccCCcccccCchhhhhccccccccccccccc-cCCchh
Confidence 77889999666788999999999999999999 566543
No 357
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.80 E-value=4.8e-09 Score=127.71 Aligned_cols=106 Identities=22% Similarity=0.184 Sum_probs=84.7
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
++|+.|+|++|++++..+..|++|++|++|+|++|++++.+| .|+++++|+.|+|++|++++..|..++++++|+.|+|
T Consensus 73 ~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 152 (680)
T 1ziw_A 73 PMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLL 152 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEEC
T ss_pred cCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEc
Confidence 578899999999884444468899999999999999988887 5888999999999999998888888888999999999
Q ss_pred cccCCCCCCCcccc----cCceeeeecCCCC
Q 002358 492 ENNSFVGEIPPALL----TGKVIFKYDNNPK 518 (931)
Q Consensus 492 ~~N~l~g~iP~~~~----~~~~~l~~~~N~~ 518 (931)
++|++++..|..+. ..+..+.+++|..
T Consensus 153 ~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 153 SNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred cCCcccccCHHHhhccccccccEEECCCCcc
Confidence 99998855554332 3566777777754
No 358
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.80 E-value=2.7e-09 Score=112.24 Aligned_cols=103 Identities=21% Similarity=0.260 Sum_probs=77.1
Q ss_pred CcEEEEEeCC-CCCcccCCccccCccccceecccCCcCCCCCCCcccccccc---EeecCCc-cccCCCCCccCCccccc
Q 002358 413 PRITKIALSG-KNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLR---IVHLENN-ELTGSLPSYMGSLPNLQ 487 (931)
Q Consensus 413 ~~l~~L~L~~-n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~---~L~L~~N-~l~g~iP~~l~~l~~L~ 487 (931)
++|+.|+|++ |+|++..+..|.++++|+.|+|++|++++ +|++.++++|+ .|+|++| ++++..+..+.++++|+
T Consensus 80 ~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~ 158 (239)
T 2xwt_C 80 SKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNET 158 (239)
T ss_dssp TTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCCCTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSE
T ss_pred cCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccccccccccccccEEECCCCcchhhcCcccccchhcce
Confidence 4788888887 88886556678888888888888888887 45577777777 8888888 88754445678888888
Q ss_pred -cccccccCCCCCCCccccc--CceeeeecCCC
Q 002358 488 -ELHIENNSFVGEIPPALLT--GKVIFKYDNNP 517 (931)
Q Consensus 488 -~l~l~~N~l~g~iP~~~~~--~~~~l~~~~N~ 517 (931)
.|+|++|+++ .+|...+. .+..+.+++|+
T Consensus 159 ~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 159 LTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp EEEECCSCCCC-EECTTTTTTCEEEEEECTTCT
T ss_pred eEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCC
Confidence 8888888888 77776554 45556667774
No 359
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.78 E-value=6.3e-09 Score=123.61 Aligned_cols=107 Identities=18% Similarity=0.280 Sum_probs=74.5
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccC-CCCCccCCccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTG-SLPSYMGSLPNLQEL 489 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g-~iP~~l~~l~~L~~l 489 (931)
.++|+.|+|++|.+++..|..|++|++|++|+|++|++++..+ .++++++|+.|+|++|++++ .+|..+++|++|+.|
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L 154 (570)
T 2z63_A 75 LSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 154 (570)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEE
T ss_pred chhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEE
Confidence 3577777777777776666777777777777777777777766 57777777777777777775 467777777777777
Q ss_pred cccccCCCCCCCccccc--Cc----eeeeecCCCC
Q 002358 490 HIENNSFVGEIPPALLT--GK----VIFKYDNNPK 518 (931)
Q Consensus 490 ~l~~N~l~g~iP~~~~~--~~----~~l~~~~N~~ 518 (931)
++++|++++..|..+.. .+ ..+.+++|..
T Consensus 155 ~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l 189 (570)
T 2z63_A 155 DLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPM 189 (570)
T ss_dssp ECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCC
T ss_pred eCcCCccceecHHHccchhccchhhhhcccCCCCc
Confidence 77777777444443322 22 3455666654
No 360
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.78 E-value=4.6e-09 Score=117.27 Aligned_cols=105 Identities=18% Similarity=0.219 Sum_probs=82.3
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCccccCCCCC--ccCCcccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPS--YMGSLPNLQE 488 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~--~l~~l~~L~~ 488 (931)
.++|+.|+|++|++++..|..|+++++|++|+|++|+|++.++. +.++++|+.|+|++|+++ .+|. .++++++|+.
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCE
T ss_pred CCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcE
Confidence 35788999999999877778888999999999999999887775 888899999999999988 5665 7888899999
Q ss_pred ccccccC-CCCCCCcc-ccc--CceeeeecCCCC
Q 002358 489 LHIENNS-FVGEIPPA-LLT--GKVIFKYDNNPK 518 (931)
Q Consensus 489 l~l~~N~-l~g~iP~~-~~~--~~~~l~~~~N~~ 518 (931)
|++++|+ +. .++.. +.. .+..+.+++|..
T Consensus 154 L~l~~n~~~~-~~~~~~~~~l~~L~~L~l~~n~l 186 (353)
T 2z80_A 154 LRVGNMDTFT-KIQRKDFAGLTFLEELEIDASDL 186 (353)
T ss_dssp EEEEESSSCC-EECTTTTTTCCEEEEEEEEETTC
T ss_pred EECCCCcccc-ccCHHHccCCCCCCEEECCCCCc
Confidence 9999885 55 55443 322 556666777753
No 361
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.78 E-value=2.6e-09 Score=126.69 Aligned_cols=102 Identities=25% Similarity=0.398 Sum_probs=57.2
Q ss_pred CCceE-EeeCCCCCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCc
Q 002358 401 PWEWV-TCSTTTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSY 479 (931)
Q Consensus 401 ~w~~v-~c~~~~~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~ 479 (931)
.|.++ .|.|. +|+.|+|++|+|++ +|..+. ++|+.|+|++|+|+. +| ..+++|+.|+|++|+|++ ||.
T Consensus 49 ~~~~l~~C~~~---~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~-ip--~~l~~L~~L~Ls~N~l~~-ip~- 117 (571)
T 3cvr_A 49 AVSLLKECLIN---QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALIS-LP--ELPASLEYLDACDNRLST-LPE- 117 (571)
T ss_dssp HHHHHHHHHHT---TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSC-CC--CCCTTCCEEECCSSCCSC-CCC-
T ss_pred hhhhccccccC---CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcc-cc--cccCCCCEEEccCCCCCC-cch-
Confidence 36666 56543 56666666666664 665553 556666666666663 33 345566666666666664 555
Q ss_pred cCCccccccccccccCCCCCCCcccccCceeeeecCCC
Q 002358 480 MGSLPNLQELHIENNSFVGEIPPALLTGKVIFKYDNNP 517 (931)
Q Consensus 480 l~~l~~L~~l~l~~N~l~g~iP~~~~~~~~~l~~~~N~ 517 (931)
+++ +|+.|+|++|+|++ ||. ....+..+.+++|.
T Consensus 118 l~~--~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~N~ 151 (571)
T 3cvr_A 118 LPA--SLKHLDVDNNQLTM-LPE-LPALLEYINADNNQ 151 (571)
T ss_dssp CCT--TCCEEECCSSCCSC-CCC-CCTTCCEEECCSSC
T ss_pred hhc--CCCEEECCCCcCCC-CCC-cCccccEEeCCCCc
Confidence 443 55555555555553 555 33444555555553
No 362
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.78 E-value=2.7e-09 Score=117.01 Aligned_cols=84 Identities=17% Similarity=0.198 Sum_probs=48.3
Q ss_pred cEEEEEeCCCCCcccCCccc--cCccccceecccCCcCCCCCCC-----ccccccccEeecCCccccCCCCCccCCcccc
Q 002358 414 RITKIALSGKNLKGEIPPEL--KNMEALTELWLDGNFLTGPLPD-----MSRLIDLRIVHLENNELTGSLPSYMGSLPNL 486 (931)
Q Consensus 414 ~l~~L~L~~n~l~g~ip~~~--~~L~~L~~L~Ls~N~l~g~~p~-----~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L 486 (931)
+|++|+|++|.+++.+|..+ +++++|+.|+|++|++++..|. +..+++|+.|+|++|++++..|..++.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 35556666666665555555 5566666666666666555442 2345556666666666655555555566666
Q ss_pred ccccccccCCC
Q 002358 487 QELHIENNSFV 497 (931)
Q Consensus 487 ~~l~l~~N~l~ 497 (931)
+.|+|++|++.
T Consensus 172 ~~L~Ls~N~l~ 182 (310)
T 4glp_A 172 TSLDLSDNPGL 182 (310)
T ss_dssp CEEECCSCTTC
T ss_pred CEEECCCCCCc
Confidence 66666666554
No 363
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.77 E-value=4.5e-09 Score=115.33 Aligned_cols=102 Identities=19% Similarity=0.165 Sum_probs=65.7
Q ss_pred CcEEEEEeCCCCCcc--cCCc-cccCccccceecccCCcCCCCCC--CccccccccEeecCCccccCCCCCccCCccccc
Q 002358 413 PRITKIALSGKNLKG--EIPP-ELKNMEALTELWLDGNFLTGPLP--DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQ 487 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g--~ip~-~~~~L~~L~~L~Ls~N~l~g~~p--~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~ 487 (931)
++|+.|+|++|+|++ .++. .+.++++|+.|+|++|+|++.+| .+..+++|+.|+|++|+|+ .+|..+. ++|+
T Consensus 201 ~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~ 277 (312)
T 1wwl_A 201 PTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLS 277 (312)
T ss_dssp TTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEE
T ss_pred CCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCce
Confidence 467777777777762 2232 23566777777777777777664 3566777777777777777 6777665 6777
Q ss_pred cccccccCCCCCCCcccc--cCceeeeecCCCCc
Q 002358 488 ELHIENNSFVGEIPPALL--TGKVIFKYDNNPKL 519 (931)
Q Consensus 488 ~l~l~~N~l~g~iP~~~~--~~~~~l~~~~N~~~ 519 (931)
.|+|++|+|+ .+|. +. ..+..+.+++|+..
T Consensus 278 ~L~Ls~N~l~-~~p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 278 VLDLSYNRLD-RNPS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp EEECCSSCCC-SCCC-TTTSCEEEEEECTTCTTT
T ss_pred EEECCCCCCC-CChh-HhhCCCCCEEeccCCCCC
Confidence 7777777777 3454 32 24555666777643
No 364
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.77 E-value=1.3e-08 Score=113.83 Aligned_cols=141 Identities=16% Similarity=0.231 Sum_probs=106.2
Q ss_pred ccccCccCcEEEEEEEECCCcEEEEEEcc--Ccc-chhhhhHHHHHHHHHhcC--CCCCcceeEEEecC---CeEEEEEE
Q 002358 614 CKKIGKGSFGSVYYGKMKDGKEVAVKIMA--DSC-SHRTQQFVTEVALLSRIH--HRNLVPLIGYCEEE---HQRILVYE 685 (931)
Q Consensus 614 ~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~--~~~-~~~~~~~~~E~~il~~l~--HpnIv~l~g~~~~~---~~~~lV~E 685 (931)
.+.|+.|.++.||+.... +..+++|+.. ... ......+.+|+++++.++ +..+.++++++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 357899999999999876 4678888765 322 123457889999999997 45688899988776 45799999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcC-------------------------------------
Q 002358 686 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC------------------------------------- 728 (931)
Q Consensus 686 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~------------------------------------- 728 (931)
|++|..+.+.. ...++...+..++.++++.|+.||+..
T Consensus 122 ~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 122 FVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp CCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred ecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 99987774321 123667788889999999999999720
Q ss_pred ------------------CCCeEecCCCCCCccccCCCc--eEEeccccccc
Q 002358 729 ------------------NPGIIHRDVKSSNILLDINMR--AKVSDFGLSRQ 760 (931)
Q Consensus 729 ------------------~~~ivH~DIkp~NILld~~~~--vkL~DFGla~~ 760 (931)
...++|||+++.|||++.++. +.|.||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997753 68999998864
No 365
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.73 E-value=8.2e-09 Score=112.19 Aligned_cols=101 Identities=23% Similarity=0.388 Sum_probs=82.7
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
.++|+.|+|++|++++ + +.+.++++|+.|+|++|++++. +.+..+++|+.|+|++|++++..| ++.+++|+.|+|
T Consensus 111 l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L 185 (291)
T 1h6t_A 111 LKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYL 185 (291)
T ss_dssp CTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEEC
Confidence 3589999999999985 4 5788999999999999999887 778999999999999999995444 889999999999
Q ss_pred cccCCCCCCCcccc--cCceeeeecCCCCc
Q 002358 492 ENNSFVGEIPPALL--TGKVIFKYDNNPKL 519 (931)
Q Consensus 492 ~~N~l~g~iP~~~~--~~~~~l~~~~N~~~ 519 (931)
++|+++ .+|. +. ..+..+.+++|+..
T Consensus 186 ~~N~i~-~l~~-l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 186 SKNHIS-DLRA-LAGLKNLDVLELFSQECL 213 (291)
T ss_dssp CSSCCC-BCGG-GTTCTTCSEEEEEEEEEE
T ss_pred CCCcCC-CChh-hccCCCCCEEECcCCccc
Confidence 999998 5664 32 26677778887654
No 366
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.71 E-value=1.7e-08 Score=107.97 Aligned_cols=100 Identities=26% Similarity=0.338 Sum_probs=69.1
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCcccccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 492 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l~ 492 (931)
++|+.|+|++|+|++ +|+ +++|++|+.|+|++|+|++..+ +.. ++|+.|+|++|++++ +| .++.+++|+.|+|+
T Consensus 63 ~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~l~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls 136 (263)
T 1xeu_A 63 TNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKNLNG-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIR 136 (263)
T ss_dssp TTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSCCTT-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECT
T ss_pred CCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCCcCc-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEECC
Confidence 578888888888874 444 8888888888888888877433 333 778888888888774 44 47777888888888
Q ss_pred ccCCCCCCCc-ccccCceeeeecCCCCc
Q 002358 493 NNSFVGEIPP-ALLTGKVIFKYDNNPKL 519 (931)
Q Consensus 493 ~N~l~g~iP~-~~~~~~~~l~~~~N~~~ 519 (931)
+|+++ .+|. .-...+..+.+++|...
T Consensus 137 ~N~i~-~~~~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 137 NNKLK-SIVMLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp TSCCC-BCGGGGGCTTCCEEECTTSCCC
T ss_pred CCcCC-CChHHccCCCCCEEECCCCcCc
Confidence 88877 4542 11235666667777543
No 367
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.70 E-value=7.7e-09 Score=113.33 Aligned_cols=103 Identities=22% Similarity=0.369 Sum_probs=72.2
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
.++|+.|+|++|.+++ +++ ++++++|+.|+|++|++++..+ +.++++|+.|+|++|++++ +|. +..+++|+.|+|
T Consensus 128 l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~L 202 (308)
T 1h6u_A 128 LSNLQVLYLDLNQITN-ISP-LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNKISD-ISP-LASLPNLIEVHL 202 (308)
T ss_dssp CTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEEC
T ss_pred CCCCCEEECCCCccCc-Ccc-ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCccCc-Chh-hcCCCCCCEEEc
Confidence 4577888888888874 333 7778888888888888877555 7778888888888888874 443 777788888888
Q ss_pred cccCCCCCCCcccccCceeeeecCCCCc
Q 002358 492 ENNSFVGEIPPALLTGKVIFKYDNNPKL 519 (931)
Q Consensus 492 ~~N~l~g~iP~~~~~~~~~l~~~~N~~~ 519 (931)
++|++++..|-.-...+..+.+++|+..
T Consensus 203 ~~N~l~~~~~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 203 KNNQISDVSPLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp TTSCCCBCGGGTTCTTCCEEEEEEEEEE
T ss_pred cCCccCccccccCCCCCCEEEccCCeee
Confidence 8888874333222235666777777654
No 368
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.70 E-value=7.5e-09 Score=114.98 Aligned_cols=104 Identities=21% Similarity=0.279 Sum_probs=81.2
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
.++++.|+|++|.+++ + +.+..+++|+.|+|++|++++. |.+..+++|+.|+|++|++++..|..++++++|+.|+|
T Consensus 242 l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 318 (347)
T 4fmz_A 242 LSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFL 318 (347)
T ss_dssp CTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEEC
T ss_pred CCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEc
Confidence 3578888888888884 3 4688888888888888888885 66888888888888888888878888888888888888
Q ss_pred cccCCCCCCCcccccCceeeeecCCCC
Q 002358 492 ENNSFVGEIPPALLTGKVIFKYDNNPK 518 (931)
Q Consensus 492 ~~N~l~g~iP~~~~~~~~~l~~~~N~~ 518 (931)
++|++++..|-.-+..+..+.+++|+.
T Consensus 319 ~~n~l~~~~~~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 319 SQNHITDIRPLASLSKMDSADFANQVI 345 (347)
T ss_dssp CSSSCCCCGGGGGCTTCSEESSSCC--
T ss_pred cCCccccccChhhhhccceeehhhhcc
Confidence 888888655534445677777777763
No 369
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.69 E-value=1.7e-08 Score=110.52 Aligned_cols=102 Identities=25% Similarity=0.438 Sum_probs=85.5
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
.++|+.|+|++|++++ +|. +.++++|+.|+|++|++++..+ +.++++|+.|+|++|++++ +|. +..+++|+.|+|
T Consensus 106 l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 180 (308)
T 1h6u_A 106 LQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKA 180 (308)
T ss_dssp CTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEEC
Confidence 4689999999999985 554 9999999999999999998766 9999999999999999994 555 899999999999
Q ss_pred cccCCCCCCCc-ccccCceeeeecCCCCc
Q 002358 492 ENNSFVGEIPP-ALLTGKVIFKYDNNPKL 519 (931)
Q Consensus 492 ~~N~l~g~iP~-~~~~~~~~l~~~~N~~~ 519 (931)
++|+++ .+|. .-...+..+.+++|...
T Consensus 181 ~~n~l~-~~~~l~~l~~L~~L~L~~N~l~ 208 (308)
T 1h6u_A 181 DDNKIS-DISPLASLPNLIEVHLKNNQIS 208 (308)
T ss_dssp CSSCCC-CCGGGGGCTTCCEEECTTSCCC
T ss_pred CCCccC-cChhhcCCCCCCEEEccCCccC
Confidence 999999 4554 22347778888888654
No 370
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.68 E-value=1.9e-08 Score=109.33 Aligned_cols=102 Identities=24% Similarity=0.309 Sum_probs=73.5
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
.++|+.|+|++|.+++ +| .++++++|+.|+|++|+|++. +.+..+++|+.|+|++|++++ + ..++.+++|+.|+|
T Consensus 89 l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L 163 (291)
T 1h6t_A 89 LKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSL 163 (291)
T ss_dssp CTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC-GGGGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC-hhhcCCCCCCEEEccCCcCCc-c-hhhccCCCCCEEEc
Confidence 3578888888888874 33 478888888888888888774 667888888888888888884 3 56778888888888
Q ss_pred cccCCCCCCCcccccCceeeeecCCCC
Q 002358 492 ENNSFVGEIPPALLTGKVIFKYDNNPK 518 (931)
Q Consensus 492 ~~N~l~g~iP~~~~~~~~~l~~~~N~~ 518 (931)
++|++++..|-.-...+..+.+++|..
T Consensus 164 ~~N~l~~~~~l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 164 EDNQISDIVPLAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp CSSCCCCCGGGTTCTTCCEEECCSSCC
T ss_pred cCCccccchhhcCCCccCEEECCCCcC
Confidence 888888433312223666677777754
No 371
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.66 E-value=3.5e-10 Score=115.61 Aligned_cols=103 Identities=24% Similarity=0.220 Sum_probs=76.7
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
.++|+.|+|++|++++ +| .+.++++|+.|+|++|+|+..++.+..+++|+.|+|++|++++ +| .++.+++|+.|+|
T Consensus 47 l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEE
T ss_pred CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEEC
Confidence 3578888888888885 77 8888888888888888888543346677888888888888884 66 5778888888888
Q ss_pred cccCCCCCCCc--cc--ccCceeeeecCCCCc
Q 002358 492 ENNSFVGEIPP--AL--LTGKVIFKYDNNPKL 519 (931)
Q Consensus 492 ~~N~l~g~iP~--~~--~~~~~~l~~~~N~~~ 519 (931)
++|+++ .+|. .+ ...+..+.+++|+..
T Consensus 123 ~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 123 SNNKIT-NWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp SEEECC-CHHHHHHHTTTTTCSEEEECSCHHH
T ss_pred CCCcCC-chhHHHHHhcCCCCCEEEecCCccc
Confidence 888887 4443 22 235667777777654
No 372
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.66 E-value=2.1e-08 Score=120.07 Aligned_cols=102 Identities=23% Similarity=0.370 Sum_probs=76.4
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
.++|+.|+|++|.|++ + +.+.+|++|+.|+|++|+|++. +.+..|++|+.|+|++|+|++..| +..|++|+.|+|
T Consensus 108 l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 182 (605)
T 1m9s_A 108 LKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYL 182 (605)
T ss_dssp CTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEEC
Confidence 4578888888888884 3 4688888888888888888876 678888888888888888886555 888888888888
Q ss_pred cccCCCCCCCcc-cccCceeeeecCCCCc
Q 002358 492 ENNSFVGEIPPA-LLTGKVIFKYDNNPKL 519 (931)
Q Consensus 492 ~~N~l~g~iP~~-~~~~~~~l~~~~N~~~ 519 (931)
++|+|+ .+|.- -+..+..+.+++|+..
T Consensus 183 s~N~i~-~l~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 183 SKNHIS-DLRALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp CSSCCC-BCGGGTTCTTCSEEECCSEEEE
T ss_pred cCCCCC-CChHHccCCCCCEEEccCCcCc
Confidence 888888 45431 1236666777777543
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.66 E-value=2.5e-08 Score=106.62 Aligned_cols=100 Identities=20% Similarity=0.302 Sum_probs=85.7
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
.++|+.|+|++|+++ .+| .+..+++|+.|+|++|+|++..| +.++++|+.|+|++|+++ .+|.... ++|+.|+|
T Consensus 40 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~-~l~~~~~--~~L~~L~L 113 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLK-NLNGIPS--ACLSRLFL 113 (263)
T ss_dssp HTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCS-CCTTCCC--SSCCEEEC
T ss_pred cCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEECCCCccC-CcCcccc--CcccEEEc
Confidence 358999999999998 777 79999999999999999999887 999999999999999999 5776444 99999999
Q ss_pred cccCCCCCCCcccc--cCceeeeecCCCCc
Q 002358 492 ENNSFVGEIPPALL--TGKVIFKYDNNPKL 519 (931)
Q Consensus 492 ~~N~l~g~iP~~~~--~~~~~l~~~~N~~~ 519 (931)
++|+++ .+|. +. ..+..+.+++|...
T Consensus 114 ~~N~l~-~~~~-l~~l~~L~~L~Ls~N~i~ 141 (263)
T 1xeu_A 114 DNNELR-DTDS-LIHLKNLEILSIRNNKLK 141 (263)
T ss_dssp CSSCCS-BSGG-GTTCTTCCEEECTTSCCC
T ss_pred cCCccC-CChh-hcCcccccEEECCCCcCC
Confidence 999999 4653 32 36778888888643
No 374
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.64 E-value=3.3e-08 Score=117.19 Aligned_cols=96 Identities=22% Similarity=0.279 Sum_probs=67.7
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCcccc------
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNL------ 486 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L------ 486 (931)
++|+.|+|++|.|++ +|. .+++|+.|+|++|+|++. |.|. ++|+.|+|++|+|+ .+|. +.. +|
T Consensus 140 ~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~l-p~l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~ 208 (571)
T 3cvr_A 140 ALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTFL-PELP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEET 208 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCC-CCCC--TTCCEEECCSSCCS-SCCC-CC----------C
T ss_pred ccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCCc-chhh--CCCCEEECcCCCCC-chhh-HHH--hhhccccc
Confidence 467788888888874 665 567788888888888774 3355 77888888888887 7777 554 66
Q ss_pred -ccccccccCCCCCCCccccc--CceeeeecCCCCcc
Q 002358 487 -QELHIENNSFVGEIPPALLT--GKVIFKYDNNPKLH 520 (931)
Q Consensus 487 -~~l~l~~N~l~g~iP~~~~~--~~~~l~~~~N~~~c 520 (931)
+.|+|++|+|+ .||..++. .+..+.+++|+..+
T Consensus 209 L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 244 (571)
T 3cvr_A 209 EIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSS 244 (571)
T ss_dssp CEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCH
T ss_pred ceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCC
Confidence 77888888887 67776654 56667777777654
No 375
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.64 E-value=4.7e-10 Score=114.63 Aligned_cols=102 Identities=23% Similarity=0.332 Sum_probs=78.0
Q ss_pred cEEEEEeCCCCCcccCCc------cccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccc
Q 002358 414 RITKIALSGKNLKGEIPP------ELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQ 487 (931)
Q Consensus 414 ~l~~L~L~~n~l~g~ip~------~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~ 487 (931)
+++.++|+.+.++|.+|. .|+++++|+.|+|++|+|++ +|.+.++++|+.|+|++|+++ .+|..+..+++|+
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~ 96 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-ISSLSGMENLRILSLGRNLIK-KIENLDAVADTLE 96 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CCCHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCS
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-ccccccCCCCCEEECCCCCcc-cccchhhcCCcCC
Confidence 566666777777777776 88888888888888888888 458888888888888888888 7888777788888
Q ss_pred cccccccCCCCCCCcccc--cCceeeeecCCCCc
Q 002358 488 ELHIENNSFVGEIPPALL--TGKVIFKYDNNPKL 519 (931)
Q Consensus 488 ~l~l~~N~l~g~iP~~~~--~~~~~l~~~~N~~~ 519 (931)
.|+|++|+++ .+| .+. ..+..+.+++|...
T Consensus 97 ~L~L~~N~l~-~l~-~~~~l~~L~~L~l~~N~i~ 128 (198)
T 1ds9_A 97 ELWISYNQIA-SLS-GIEKLVNLRVLYMSNNKIT 128 (198)
T ss_dssp EEEEEEEECC-CHH-HHHHHHHSSEEEESEEECC
T ss_pred EEECcCCcCC-cCC-ccccCCCCCEEECCCCcCC
Confidence 8888888888 466 332 25666777777543
No 376
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.64 E-value=2e-08 Score=120.25 Aligned_cols=80 Identities=21% Similarity=0.382 Sum_probs=51.9
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCcccccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 492 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l~ 492 (931)
++|+.|+|++|.|++. +.|+.|++|+.|+|++|+|++.+| +..|++|+.|+|++|+|++ +| .+..|++|+.|+|+
T Consensus 131 ~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~L~ 205 (605)
T 1m9s_A 131 PQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELF 205 (605)
T ss_dssp TTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEECC
T ss_pred CccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEcc
Confidence 4666666666666643 556666666666666666666655 6666666666666666663 33 46666666666666
Q ss_pred ccCCC
Q 002358 493 NNSFV 497 (931)
Q Consensus 493 ~N~l~ 497 (931)
+|+++
T Consensus 206 ~N~l~ 210 (605)
T 1m9s_A 206 SQECL 210 (605)
T ss_dssp SEEEE
T ss_pred CCcCc
Confidence 66666
No 377
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.63 E-value=1.3e-08 Score=111.94 Aligned_cols=105 Identities=14% Similarity=0.084 Sum_probs=89.9
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCC-c-cccccccEeecCCccccCCCCCccCCccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-M-SRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 489 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~-~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l 489 (931)
.++++.|+|++|.+++..|..++.+++|+.|+|++|++++..|. + ..+++|+.|+|++|+++ .+|.. ..+++|+.|
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~-~~l~~L~~L 196 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQ-VVFAKLKTL 196 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC-EEECC-CCCTTCCEE
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCc-ccccc-cccccCCEE
Confidence 35899999999999988788999999999999999999998874 5 57999999999999999 45543 459999999
Q ss_pred cccccCCCCCCCccccc--CceeeeecCCCCc
Q 002358 490 HIENNSFVGEIPPALLT--GKVIFKYDNNPKL 519 (931)
Q Consensus 490 ~l~~N~l~g~iP~~~~~--~~~~l~~~~N~~~ 519 (931)
+|++|+++ .+|+.+.. .+..+.+++|...
T Consensus 197 ~Ls~N~l~-~l~~~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 197 DLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp ECCSSCCC-EECGGGGGGTTCSEEECTTSCCC
T ss_pred ECCCCcCC-cchhhhcccCcccEEECcCCccc
Confidence 99999999 67776543 7788888888654
No 378
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.60 E-value=1.1e-08 Score=111.66 Aligned_cols=186 Identities=22% Similarity=0.237 Sum_probs=119.5
Q ss_pred cccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcC-CCC--CcceeEEEecCC---eEEEEEEecC
Q 002358 615 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRN--LVPLIGYCEEEH---QRILVYEYMH 688 (931)
Q Consensus 615 ~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-Hpn--Iv~l~g~~~~~~---~~~lV~E~~~ 688 (931)
+.++.|....||+.. +.+++|+.... .....+.+|+++|+.+. +.. +.+++....... ..++|||+++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 568899999999863 56888986432 34567889999999884 333 344554443333 3478999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhc-----------------------------------------
Q 002358 689 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG----------------------------------------- 727 (931)
Q Consensus 689 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~----------------------------------------- 727 (931)
|.+|.+... ..++..++..++.++++.|+.||+.
T Consensus 100 G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 100 GVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 988765332 1355666777888888888888851
Q ss_pred --------------CCCCeEecCCCCCCccccC--CCceEEecccccccccccccccccccccCCCccCCCccCC-----
Q 002358 728 --------------CNPGIIHRDVKSSNILLDI--NMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN----- 786 (931)
Q Consensus 728 --------------~~~~ivH~DIkp~NILld~--~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~----- 786 (931)
....++|||+++.||++++ +..+.|.||+.+..-..... ........ .-..|+....
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~D-l~~~~~~~-~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDND-FISLMEDD-EEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHH-HHTTCCTT-TSCCHHHHHHHHHHH
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHH-HHHHHhhc-cccCHHHHHHHHHHc
Confidence 1245899999999999998 45678999998765322111 00000000 0012221100
Q ss_pred CC---------CCccchhHHHHHHHHHHHhCCCCCC
Q 002358 787 QQ---------LTEKSDVYSFGVVLLELISGKKPVS 813 (931)
Q Consensus 787 ~~---------~s~ksDVwSlGvlL~eLltG~~Pf~ 813 (931)
+. .....+.|+++.++|++.+|..+|-
T Consensus 253 ~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 253 KHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 00 1123689999999999999987763
No 379
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.57 E-value=3.4e-08 Score=114.68 Aligned_cols=102 Identities=25% Similarity=0.287 Sum_probs=68.2
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCcccccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 492 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l~ 492 (931)
++|+.|+|++|.+.+..| ++.+++|+.|+|++|++++..| +..+++|+.|+|++|++++. ..++++++|+.|+++
T Consensus 287 ~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~ 361 (466)
T 1o6v_A 287 TALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAG 361 (466)
T ss_dssp TTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECC
T ss_pred CccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCC
Confidence 467777777777774332 6677777777777777777665 66777777777777777743 356777777777777
Q ss_pred ccCCCCCCCcccccCceeeeecCCCCc
Q 002358 493 NNSFVGEIPPALLTGKVIFKYDNNPKL 519 (931)
Q Consensus 493 ~N~l~g~iP~~~~~~~~~l~~~~N~~~ 519 (931)
+|++++..|-.-...+..+.+++|++.
T Consensus 362 ~n~l~~~~~~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 362 HNQISDLTPLANLTRITQLGLNDQAWT 388 (466)
T ss_dssp SSCCCBCGGGTTCTTCCEEECCCEEEE
T ss_pred CCccCccchhhcCCCCCEEeccCCccc
Confidence 777776665333345566666666554
No 380
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.55 E-value=9.6e-08 Score=110.64 Aligned_cols=96 Identities=25% Similarity=0.257 Sum_probs=62.7
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCcccccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 492 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l~ 492 (931)
++|+.|+|++|++++ +| ++++++|++|+|++|+|++. | ++++++|+.|+|++|+|++ +| ++.+++|+.|+++
T Consensus 64 ~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~-~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~ 135 (457)
T 3bz5_A 64 TGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D-VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCA 135 (457)
T ss_dssp TTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C-CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECT
T ss_pred CCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e-cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECC
Confidence 467777777777764 33 66777777777777777764 2 6677777777777777774 44 6677777777777
Q ss_pred ccCCCCCCCcccccCceeeeecCCC
Q 002358 493 NNSFVGEIPPALLTGKVIFKYDNNP 517 (931)
Q Consensus 493 ~N~l~g~iP~~~~~~~~~l~~~~N~ 517 (931)
+|+|++ +|-.-...+..+.+++|.
T Consensus 136 ~N~l~~-l~l~~l~~L~~L~l~~n~ 159 (457)
T 3bz5_A 136 RNTLTE-IDVSHNTQLTELDCHLNK 159 (457)
T ss_dssp TSCCSC-CCCTTCTTCCEEECTTCS
T ss_pred CCccce-eccccCCcCCEEECCCCC
Confidence 777774 553333455666666664
No 381
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.54 E-value=5.8e-08 Score=112.68 Aligned_cols=80 Identities=33% Similarity=0.472 Sum_probs=43.7
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCcccccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 492 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l~ 492 (931)
++|+.|+|++|.+++ +|+ +..+++|+.|+|++|++++..| +..+++|+.|+|++|++++..| ++.+++|+.|+++
T Consensus 265 ~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~ 339 (466)
T 1o6v_A 265 TKLTELKLGANQISN-ISP-LAGLTALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFY 339 (466)
T ss_dssp TTCSEEECCSSCCCC-CGG-GTTCTTCSEEECCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECC
T ss_pred CCCCEEECCCCccCc-ccc-ccCCCccCeEEcCCCcccCchh-hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECC
Confidence 355555555555553 222 5555555555555555555433 5555555555555555554443 4555555555555
Q ss_pred ccCCC
Q 002358 493 NNSFV 497 (931)
Q Consensus 493 ~N~l~ 497 (931)
+|+++
T Consensus 340 ~n~l~ 344 (466)
T 1o6v_A 340 NNKVS 344 (466)
T ss_dssp SSCCC
T ss_pred CCccC
Confidence 55555
No 382
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.52 E-value=1e-07 Score=110.34 Aligned_cols=76 Identities=21% Similarity=0.286 Sum_probs=35.6
Q ss_pred cEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccccccccc
Q 002358 414 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 493 (931)
Q Consensus 414 ~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l~~ 493 (931)
+++.|+|++|++++ +| ++.+++|+.|+|++|+|++. +++.+++|+.|+|++|+|++ +| ++.+++|+.|++++
T Consensus 171 ~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~ 242 (457)
T 3bz5_A 171 QLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSV 242 (457)
T ss_dssp TCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCS
T ss_pred cCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeC
Confidence 44444444444443 33 44444444444444444443 24444444444444444443 33 44444444444444
Q ss_pred cCCC
Q 002358 494 NSFV 497 (931)
Q Consensus 494 N~l~ 497 (931)
|+|+
T Consensus 243 N~l~ 246 (457)
T 3bz5_A 243 NPLT 246 (457)
T ss_dssp SCCS
T ss_pred CcCC
Confidence 4444
No 383
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.50 E-value=1.7e-07 Score=108.42 Aligned_cols=97 Identities=30% Similarity=0.411 Sum_probs=78.2
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCcccccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 492 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l~ 492 (931)
++++.|+|++|++++ +| +|+++++|++|+|++|++++ +|.. +.+|+.|+|++|++++ +| .++++++|+.|+++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~--~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL--PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC--CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC--cccccEEECcCCcCCc-Cc-cccCCCCCCEEECC
Confidence 579999999999995 88 69999999999999999998 4432 2489999999999995 77 58999999999999
Q ss_pred ccCCCCCCCcccccCceeeeecCCCC
Q 002358 493 NNSFVGEIPPALLTGKVIFKYDNNPK 518 (931)
Q Consensus 493 ~N~l~g~iP~~~~~~~~~l~~~~N~~ 518 (931)
+|+++ .+|... ..+..+.+++|..
T Consensus 204 ~N~l~-~l~~~~-~~L~~L~l~~n~l 227 (454)
T 1jl5_A 204 NNSLK-KLPDLP-LSLESIVAGNNIL 227 (454)
T ss_dssp SSCCS-SCCCCC-TTCCEEECCSSCC
T ss_pred CCcCC-cCCCCc-CcccEEECcCCcC
Confidence 99998 466543 4567777777743
No 384
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.50 E-value=7.5e-08 Score=106.84 Aligned_cols=103 Identities=18% Similarity=0.326 Sum_probs=84.7
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccccccc
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l 491 (931)
.++++.|+|++|+++ .+|+ +..+++|+.|+|++|++++. +.+..+++|+.|+|++|++++ +| .+..+++|+.|+|
T Consensus 220 ~~~L~~L~l~~n~l~-~~~~-~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~L 294 (347)
T 4fmz_A 220 MTRLNSLKIGNNKIT-DLSP-LANLSQLTWLEIGTNQISDI-NAVKDLTKLKMLNVGSNQISD-IS-VLNNLSQLNSLFL 294 (347)
T ss_dssp CTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEEC
T ss_pred CCcCCEEEccCCccC-CCcc-hhcCCCCCEEECCCCccCCC-hhHhcCCCcCEEEccCCccCC-Ch-hhcCCCCCCEEEC
Confidence 358999999999998 4554 88999999999999999885 678899999999999999994 54 5888999999999
Q ss_pred cccCCCCCCCcccc--cCceeeeecCCCCc
Q 002358 492 ENNSFVGEIPPALL--TGKVIFKYDNNPKL 519 (931)
Q Consensus 492 ~~N~l~g~iP~~~~--~~~~~l~~~~N~~~ 519 (931)
++|++++..|..+. ..+..+.+++|+..
T Consensus 295 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 324 (347)
T 4fmz_A 295 NNNQLGNEDMEVIGGLTNLTTLFLSQNHIT 324 (347)
T ss_dssp CSSCCCGGGHHHHHTCTTCSEEECCSSSCC
T ss_pred cCCcCCCcChhHhhccccCCEEEccCCccc
Confidence 99999866666553 36778888888754
No 385
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.46 E-value=9.7e-08 Score=110.49 Aligned_cols=85 Identities=28% Similarity=0.498 Sum_probs=48.4
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccC--CCCCccCCc-------
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTG--SLPSYMGSL------- 483 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g--~iP~~l~~l------- 483 (931)
++++.|+|++|++++ +|.. +++|+.|+|++|++++ +|. .+++|+.|+|++|+++| .+|.++++|
T Consensus 317 ~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~--~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~ 389 (454)
T 1jl5_A 317 PSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE--LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLA 389 (454)
T ss_dssp TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC---
T ss_pred CcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc--hhhhccEEECCCCCCCcCCCChHHHHhhhhccccc
Confidence 477888888888874 6654 5778888888888885 444 47788888888888887 778888777
Q ss_pred ------cccccccccccCCCC--CCCccc
Q 002358 484 ------PNLQELHIENNSFVG--EIPPAL 504 (931)
Q Consensus 484 ------~~L~~l~l~~N~l~g--~iP~~~ 504 (931)
++|+.|++++|+++| .+|.++
T Consensus 390 ~i~~~~~~L~~L~ls~N~l~~~~~iP~sl 418 (454)
T 1jl5_A 390 EVPELPQNLKQLHVETNPLREFPDIPESV 418 (454)
T ss_dssp -----------------------------
T ss_pred ccccccCcCCEEECCCCcCCccccchhhH
Confidence 778888888888876 676654
No 386
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=98.45 E-value=2.4e-07 Score=92.49 Aligned_cols=152 Identities=19% Similarity=0.099 Sum_probs=88.1
Q ss_pred EEeeccCCCCCCcccCCCCCCCCccccCCCCCCCceeccCCceeeecccccccCCCCCCChhhhhhcceeccCceEEEee
Q 002358 189 AARVNFGALTKDALRYPDDPYDRIWDSDLDRRPNFVVGAASGTVRINTTKNIETRTREYPPVKVMQTAVVGTEGVLSYRL 268 (931)
Q Consensus 189 ~~R~~~g~~~~~~~~y~~d~~dR~W~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~pP~~v~qtA~~~~~~~~~~~~ 268 (931)
+-|.|+|+.. +. |..+|.|+++...... +..+.. ...+.....+.+|..|+|||=... .++++..
T Consensus 7 ~~~INcGg~~---~~---d~~gr~w~~D~~~~~~---g~~~~~-----~~~~~~~~~~~~~~~lY~TaR~~~-~~~tY~f 71 (174)
T 2jwp_A 7 IWAVNAGGES---HV---DVHGIHYRKDPLEGRV---GRASDY-----GMKLPILRSNPEDQVLYQTERYNE-DSFGYDI 71 (174)
T ss_dssp EEEEEETSSS---EE---ETTTEEECSSCSSTTC---CCCCCC-----CTTSCCSSSCHHHHHTTTCCCCCC-SCEEEEE
T ss_pred EEEEECCCCC---cc---CCCCCEEcCCcCcccC---Cccccc-----ccceEecccCCCCchhhhhhccCC-CCeEEEE
Confidence 4599999743 22 6789999998542211 111100 001111122446889999998753 5677777
Q ss_pred cCCCCCccceeeeeeecccCcCCCcceEEEeecCcccccCCceeeeeecCCCceeeecccccee------------eeee
Q 002358 269 NLEDFPANARAFAYFAEIQDLGPSETRKFKLEQPYFADYSNAVVNIAENANGSYTLYEPSYMNV------------TLNF 336 (931)
Q Consensus 269 ~~~~~~~~~~~~lyFae~~~~~~~~~R~F~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~ 336 (931)
+.. .+-.|.+-|||+|+.. ...+.|.|||.++...-. ..+++...+++...++.--..++ +..+
T Consensus 72 ~v~-~~G~Y~VrLhF~ei~~-~~~~~rvFdV~ing~~~l--~~fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~~~g 147 (174)
T 2jwp_A 72 PIK-EEGEYVLVLKFAEVYF-AQSQQKVFDVRVNGHTVV--KDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTG 147 (174)
T ss_dssp ECC-SCEEEEEEEEEECCSC-CCSSSSCEEEEETTEEEE--EEECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEECCS
T ss_pred EeC-CCeEEEEEEEEecccc-CCCCCeEeEEEECCEEee--cCcCHHHhhCCCeeEEEEEEEEEecCceeeeeeecccCC
Confidence 653 2346667799999974 457999999966543332 23455433322111111000111 2456
Q ss_pred EEEEEEeecCCCccccchhhhhhhh
Q 002358 337 VLSFSFVKTRDSTLGPLLNAIEISK 361 (931)
Q Consensus 337 ~~~~~~~~~~~s~l~p~ina~e~~~ 361 (931)
.+.+++.|. ..-.|+|||+|+++
T Consensus 148 ~L~I~f~p~--~~~~a~inaIEI~~ 170 (174)
T 2jwp_A 148 KLSVEFVKG--YYDNPKVCALFIMK 170 (174)
T ss_dssp EEEEEEECS--SSCSSSEEEEEEES
T ss_pred eEEEEEecc--CCCCcEEEEEEEEe
Confidence 788888864 35579999999965
No 387
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.41 E-value=3e-07 Score=110.26 Aligned_cols=94 Identities=26% Similarity=0.353 Sum_probs=63.4
Q ss_pred cEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCccccccccccc
Q 002358 414 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 493 (931)
Q Consensus 414 ~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l~~ 493 (931)
+|+.|+|++|.|+ .+|.. +++|+.|+|++|+|++.+ ..+++|+.|+|++|+|+ .||. .+++|+.|+|++
T Consensus 202 ~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~ 270 (622)
T 3g06_A 202 ELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTSLP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYR 270 (622)
T ss_dssp TCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCS
T ss_pred hhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCcCC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCC
Confidence 4555555555555 34432 366777777777777743 45577788888888887 6776 567788888888
Q ss_pred cCCCCCCCccccc--CceeeeecCCCCc
Q 002358 494 NSFVGEIPPALLT--GKVIFKYDNNPKL 519 (931)
Q Consensus 494 N~l~g~iP~~~~~--~~~~l~~~~N~~~ 519 (931)
|+|+ .||..+.. .+..+.+++|+..
T Consensus 271 N~L~-~lp~~l~~l~~L~~L~L~~N~l~ 297 (622)
T 3g06_A 271 NQLT-RLPESLIHLSSETTVNLEGNPLS 297 (622)
T ss_dssp SCCC-SCCGGGGGSCTTCEEECCSCCCC
T ss_pred CCCC-cCCHHHhhccccCEEEecCCCCC
Confidence 8888 77776543 5666777777754
No 388
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.40 E-value=1.6e-08 Score=114.33 Aligned_cols=105 Identities=16% Similarity=0.216 Sum_probs=58.5
Q ss_pred cEEEEEeCCCCCc--c---cCCccccCccccceecccCCcCC----CCCC-CccccccccEeecCCccccCC----CCCc
Q 002358 414 RITKIALSGKNLK--G---EIPPELKNMEALTELWLDGNFLT----GPLP-DMSRLIDLRIVHLENNELTGS----LPSY 479 (931)
Q Consensus 414 ~l~~L~L~~n~l~--g---~ip~~~~~L~~L~~L~Ls~N~l~----g~~p-~~~~l~~L~~L~L~~N~l~g~----iP~~ 479 (931)
+|+.|+|++|+++ | .+|..+.++++|+.|+|++|.|+ +.+| .+..+++|+.|+|++|+|++. +|..
T Consensus 188 ~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~ 267 (386)
T 2ca6_A 188 LLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDA 267 (386)
T ss_dssp TCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHH
T ss_pred CcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHH
Confidence 5666666666665 2 23335566666666666666664 3344 355666666666666666544 4454
Q ss_pred c--CCccccccccccccCCCC----CCCccc---ccCceeeeecCCCC
Q 002358 480 M--GSLPNLQELHIENNSFVG----EIPPAL---LTGKVIFKYDNNPK 518 (931)
Q Consensus 480 l--~~l~~L~~l~l~~N~l~g----~iP~~~---~~~~~~l~~~~N~~ 518 (931)
+ +++++|+.|+|++|++++ .+|..+ +..+..+.+++|+.
T Consensus 268 l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l 315 (386)
T 2ca6_A 268 FSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF 315 (386)
T ss_dssp HHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBS
T ss_pred HhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcC
Confidence 4 335666666666666664 255544 23455555555543
No 389
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.39 E-value=1.2e-07 Score=113.75 Aligned_cols=85 Identities=26% Similarity=0.307 Sum_probs=76.6
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCCCccccccccEeecCCccccCCCCCccCCcccccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 492 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~l~ 492 (931)
++|+.|+|++|+|++ +| ..+++|+.|+|++|+|++.++ .+++|+.|+|++|+|+ .||..++++++|+.|+|+
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 589999999999995 77 567899999999999997554 7789999999999999 999999999999999999
Q ss_pred ccCCCCCCCcccc
Q 002358 493 NNSFVGEIPPALL 505 (931)
Q Consensus 493 ~N~l~g~iP~~~~ 505 (931)
+|+|+|.+|..+.
T Consensus 293 ~N~l~~~~~~~l~ 305 (622)
T 3g06_A 293 GNPLSERTLQALR 305 (622)
T ss_dssp SCCCCHHHHHHHH
T ss_pred CCCCCCcCHHHHH
Confidence 9999988887653
No 390
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.38 E-value=2e-08 Score=113.50 Aligned_cols=107 Identities=21% Similarity=0.323 Sum_probs=87.3
Q ss_pred CcEEEEEeCCCCCc-ccCC---ccccCccccceecccCCcCC--C---CCC-CccccccccEeecCCcccc----CCCCC
Q 002358 413 PRITKIALSGKNLK-GEIP---PELKNMEALTELWLDGNFLT--G---PLP-DMSRLIDLRIVHLENNELT----GSLPS 478 (931)
Q Consensus 413 ~~l~~L~L~~n~l~-g~ip---~~~~~L~~L~~L~Ls~N~l~--g---~~p-~~~~l~~L~~L~L~~N~l~----g~iP~ 478 (931)
++|+.|+|++|+++ +.+| ..+.++++|+.|+|++|+|+ | .+| .+.++++|+.|+|++|+|+ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 47899999999997 5566 56788899999999999998 4 456 6888999999999999996 67888
Q ss_pred ccCCccccccccccccCCCCC----CCccc----ccCceeeeecCCCCc
Q 002358 479 YMGSLPNLQELHIENNSFVGE----IPPAL----LTGKVIFKYDNNPKL 519 (931)
Q Consensus 479 ~l~~l~~L~~l~l~~N~l~g~----iP~~~----~~~~~~l~~~~N~~~ 519 (931)
.+..+++|+.|+|++|++++. +|..+ ...+..+.+++|...
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~ 287 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIE 287 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCB
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCC
Confidence 889999999999999999865 55554 446778888888754
No 391
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.31 E-value=7.2e-08 Score=108.03 Aligned_cols=105 Identities=18% Similarity=0.176 Sum_probs=71.2
Q ss_pred CcEEEEEeCCCCCcccCC----ccccCcc-ccceecccCCcCCCCCC-Ccccc-----ccccEeecCCccccCCCCCccC
Q 002358 413 PRITKIALSGKNLKGEIP----PELKNME-ALTELWLDGNFLTGPLP-DMSRL-----IDLRIVHLENNELTGSLPSYMG 481 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip----~~~~~L~-~L~~L~Ls~N~l~g~~p-~~~~l-----~~L~~L~L~~N~l~g~iP~~l~ 481 (931)
.+|+.|+|++|.|++..+ ..|.+++ +|+.|+|++|+|++..+ .+..+ ++|+.|+|++|++++..+..++
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 357888888888775555 5667777 78888888888877766 35554 7788888888888766666444
Q ss_pred Cc-----cccccccccccCCCCCCCcccc-------cCceeeeecCCC
Q 002358 482 SL-----PNLQELHIENNSFVGEIPPALL-------TGKVIFKYDNNP 517 (931)
Q Consensus 482 ~l-----~~L~~l~l~~N~l~g~iP~~~~-------~~~~~l~~~~N~ 517 (931)
.+ ++|+.|+|++|++++..+..+. ..+..+.+++|.
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 149 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGND 149 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSC
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCc
Confidence 43 6788888888887744433321 255666676664
No 392
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.29 E-value=1.8e-07 Score=99.66 Aligned_cols=65 Identities=26% Similarity=0.411 Sum_probs=29.2
Q ss_pred CccccceecccCCcCCCC--CCC-ccccccccEeecCCccccCCCCCccCCcc--ccccccccccCCCCCCC
Q 002358 435 NMEALTELWLDGNFLTGP--LPD-MSRLIDLRIVHLENNELTGSLPSYMGSLP--NLQELHIENNSFVGEIP 501 (931)
Q Consensus 435 ~L~~L~~L~Ls~N~l~g~--~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~--~L~~l~l~~N~l~g~iP 501 (931)
+|++|+.|+|++|+|++. +|+ +..+++|+.|+|++|+|++. +.+..+. +|+.|+|++|.+++.+|
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 344455555555555442 222 34455555555555555432 2222222 45555555555554444
No 393
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.26 E-value=3.6e-06 Score=91.13 Aligned_cols=140 Identities=19% Similarity=0.230 Sum_probs=92.4
Q ss_pred ccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCC---CCcceeEEEecCCeEEEEEEecCCC
Q 002358 614 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR---NLVPLIGYCEEEHQRILVYEYMHNG 690 (931)
Q Consensus 614 ~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~Hp---nIv~l~g~~~~~~~~~lV~E~~~~g 690 (931)
.+.|+.|.++.||+++..+|+.++||+...........|.+|++.|+.+++. .+.+++++. ..++||||++++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~ 95 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccC
Confidence 3679999999999999999999999996543232346789999999999865 577777764 358999999998
Q ss_pred CHH--------H---HhccCCCC------------------CCCCHHHH-----------------------HHHHHHHH
Q 002358 691 TLR--------D---RLHGSVNQ------------------KPLDWLTR-----------------------LQIAHDAA 718 (931)
Q Consensus 691 sL~--------~---~L~~~~~~------------------~~l~~~~~-----------------------~~i~~qia 718 (931)
++. + .||..... -.-+|... ...+.+++
T Consensus 96 ~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l~ 175 (288)
T 3d1u_A 96 PPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKVL 175 (288)
T ss_dssp CCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 642 1 22322110 00123221 11122222
Q ss_pred HHhHH-hhhcCCCCeEecCCCCCCccccCCCceEEecccccc
Q 002358 719 KGLEY-LHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 759 (931)
Q Consensus 719 ~aL~y-LH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~ 759 (931)
..+.. +.......++|+|+.+.||+++. +.+.|.|| .+.
T Consensus 176 ~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 176 DALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp HTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 22221 11123578999999999999988 45889999 554
No 394
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.25 E-value=5.2e-08 Score=107.50 Aligned_cols=103 Identities=12% Similarity=0.080 Sum_probs=66.0
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCC-CC-CccccccccEeecCCccccCCCCCccCCcccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGP-LP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~-~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l~ 490 (931)
++++.|+|++|.+.+.++. +.++++|+.|+|++|.+++. +| .+.++++|+.|+|++|++++.+|..++++++|+.|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4667777777777655443 55677777777777776654 55 366677777777777777766677777777777777
Q ss_pred cccc-CCCCC-CCccc--ccCceeeeecCC
Q 002358 491 IENN-SFVGE-IPPAL--LTGKVIFKYDNN 516 (931)
Q Consensus 491 l~~N-~l~g~-iP~~~--~~~~~~l~~~~N 516 (931)
|++| .+++. +|..+ ...+..+.+++|
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~ 178 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWC 178 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCC
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCC
Confidence 7777 56542 44322 225556666665
No 395
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.24 E-value=2.6e-06 Score=93.67 Aligned_cols=132 Identities=17% Similarity=0.212 Sum_probs=96.1
Q ss_pred ccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCC----CCCcceeEEEecCCeEEEEEEecCC
Q 002358 614 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHH----RNLVPLIGYCEEEHQRILVYEYMHN 689 (931)
Q Consensus 614 ~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H----pnIv~l~g~~~~~~~~~lV~E~~~~ 689 (931)
.+.++.|....||+. |+.+++|+.... .....+.+|.++|+.+.+ ..+.++++. +..++||||++|
T Consensus 42 v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G 111 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKG 111 (320)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCC
T ss_pred EEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCC
Confidence 457899999999998 677888976432 224568899999999876 123445544 456899999999
Q ss_pred CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcC-----------------------------------------
Q 002358 690 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC----------------------------------------- 728 (931)
Q Consensus 690 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~----------------------------------------- 728 (931)
.++.+... ..++......++.++++.|+.||+..
T Consensus 112 ~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 112 ERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp BCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred cccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 88864322 12455566677777777777777421
Q ss_pred -------------------CCCeEecCCCCCCccccCCCceEEeccccccc
Q 002358 729 -------------------NPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 760 (931)
Q Consensus 729 -------------------~~~ivH~DIkp~NILld~~~~vkL~DFGla~~ 760 (931)
...++|+|++|.||+++.+..+.|.||+.+..
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 12359999999999999866679999998864
No 396
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.20 E-value=6.1e-06 Score=87.95 Aligned_cols=134 Identities=17% Similarity=0.117 Sum_probs=96.9
Q ss_pred ccCccCcE-EEEEEEEC-CCcEEEEEEccCccchhhhhHHHHHHHHHhcC-CCCCcceeEEEecCCeEEEEEEecCCCCH
Q 002358 616 KIGKGSFG-SVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYEYMHNGTL 692 (931)
Q Consensus 616 ~LG~G~fG-~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~g~~~~~~~~~lV~E~~~~gsL 692 (931)
.+..|..| .||+.... ++..+++|+-.. .....+.+|...|+.+. +--+.++++++.+.+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 44455555 68988765 467899998653 23456888999999884 33367788999888999999999999888
Q ss_pred HHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhc---------------------------------------------
Q 002358 693 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG--------------------------------------------- 727 (931)
Q Consensus 693 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~--------------------------------------------- 727 (931)
.+..... ......++.++++.|+-||+.
T Consensus 108 ~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 108 FQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred cccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 7765421 112334566677777777741
Q ss_pred ----------CCCCeEecCCCCCCccccCCCceEEecccccc
Q 002358 728 ----------CNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 759 (931)
Q Consensus 728 ----------~~~~ivH~DIkp~NILld~~~~vkL~DFGla~ 759 (931)
....++|||+.+.|||+++++.+-|.||+.+.
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 01237999999999999987777899999775
No 397
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.15 E-value=2.2e-07 Score=102.51 Aligned_cols=112 Identities=19% Similarity=0.291 Sum_probs=94.7
Q ss_pred CCceEEeeCCCCCcEEEEEeCCCCCcccCCccccCc--cccceecccCCcCCCCCCCccccccccEeecCCccccCC-CC
Q 002358 401 PWEWVTCSTTTPPRITKIALSGKNLKGEIPPELKNM--EALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGS-LP 477 (931)
Q Consensus 401 ~w~~v~c~~~~~~~l~~L~L~~n~l~g~ip~~~~~L--~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~-iP 477 (931)
.|..+.|+ +..++.|+|++|++. |..+..+ ++|+.|+|++|.+.+.++.+.++++|+.|+|++|++++. +|
T Consensus 38 ~W~~~~~~---~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~ 111 (336)
T 2ast_B 38 RWYRLASD---ESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLH 111 (336)
T ss_dssp HHHHHHTC---STTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHH
T ss_pred HHHHHhcC---chhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHH
Confidence 35555443 235789999999887 5678888 999999999999999999999999999999999999976 89
Q ss_pred CccCCccccccccccccCCCCCCCccccc--CceeeeecCCCC
Q 002358 478 SYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPK 518 (931)
Q Consensus 478 ~~l~~l~~L~~l~l~~N~l~g~iP~~~~~--~~~~l~~~~N~~ 518 (931)
..+..+++|+.|+|++|++++.+|..+.. .+..+.+++|..
T Consensus 112 ~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~ 154 (336)
T 2ast_B 112 GILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSG 154 (336)
T ss_dssp HHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBS
T ss_pred HHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCC
Confidence 99999999999999999999877776643 677888888743
No 398
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.09 E-value=1.3e-05 Score=87.49 Aligned_cols=135 Identities=15% Similarity=0.189 Sum_probs=93.0
Q ss_pred cccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCC---CCcceeEEEe-cCCeEEEEEEecCCC
Q 002358 615 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR---NLVPLIGYCE-EEHQRILVYEYMHNG 690 (931)
Q Consensus 615 ~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~Hp---nIv~l~g~~~-~~~~~~lV~E~~~~g 690 (931)
+.++.|....||+. |+.+++|+-.. ......+.+|+++|+.+.+. .+.+++.++. ..+..++|||+++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 56788998999987 57788888432 23456788999999999753 3556666664 455678999999998
Q ss_pred CHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhc-------------------------------------------
Q 002358 691 TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG------------------------------------------- 727 (931)
Q Consensus 691 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~------------------------------------------- 727 (931)
.+.+..-. .++......++.++++.|+.||+.
T Consensus 99 ~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 99 ILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp ECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred ECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 77653211 123344445555555555555531
Q ss_pred --------------CCCCeEecCCCCCCccccC---CCc-eEEeccccccc
Q 002358 728 --------------CNPGIIHRDVKSSNILLDI---NMR-AKVSDFGLSRQ 760 (931)
Q Consensus 728 --------------~~~~ivH~DIkp~NILld~---~~~-vkL~DFGla~~ 760 (931)
....++|||+++.||+++. ++. +.|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2345799999999999987 455 48999997754
No 399
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.09 E-value=3.5e-07 Score=102.38 Aligned_cols=102 Identities=14% Similarity=0.043 Sum_probs=87.1
Q ss_pred EEEeCCCCCcccCCccccCccccceecccCCcCCCCCC----C-ccccc-cccEeecCCccccCCCCCccCCc-----cc
Q 002358 417 KIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP----D-MSRLI-DLRIVHLENNELTGSLPSYMGSL-----PN 485 (931)
Q Consensus 417 ~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p----~-~~~l~-~L~~L~L~~N~l~g~iP~~l~~l-----~~ 485 (931)
.++|++|+++|.+|..+...++|+.|+|++|+|++..+ + +.+++ +|+.|+|++|+|++..+..++.+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46899999999999988888899999999999999886 2 67888 89999999999998888888776 99
Q ss_pred cccccccccCCCCCCCcccc-------cCceeeeecCCCC
Q 002358 486 LQELHIENNSFVGEIPPALL-------TGKVIFKYDNNPK 518 (931)
Q Consensus 486 L~~l~l~~N~l~g~iP~~~~-------~~~~~l~~~~N~~ 518 (931)
|+.|+|++|++++..+..+. ..+..+.+++|..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l 121 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDF 121 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCG
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcC
Confidence 99999999999976665432 3567788888863
No 400
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.08 E-value=4.1e-07 Score=96.96 Aligned_cols=79 Identities=22% Similarity=0.339 Sum_probs=66.9
Q ss_pred CCcEEEEEeCCCCCcc--cCCccccCccccceecccCCcCCCCCCCccccc--cccEeecCCccccCCCCC-------cc
Q 002358 412 PPRITKIALSGKNLKG--EIPPELKNMEALTELWLDGNFLTGPLPDMSRLI--DLRIVHLENNELTGSLPS-------YM 480 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g--~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~--~L~~L~L~~N~l~g~iP~-------~l 480 (931)
.++|+.|+|++|+|++ .+|..+..|++|+.|+|++|+|++. .++..|. +|+.|+|++|.+++.+|+ .+
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il 247 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIR 247 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-hhhhhcccCCcceEEccCCcCccccCcchhHHHHHH
Confidence 4689999999999998 6778889999999999999999987 4444444 999999999999998884 36
Q ss_pred CCccccccccc
Q 002358 481 GSLPNLQELHI 491 (931)
Q Consensus 481 ~~l~~L~~l~l 491 (931)
..+++|+.||=
T Consensus 248 ~~~P~L~~LDg 258 (267)
T 3rw6_A 248 ERFPKLLRLDG 258 (267)
T ss_dssp HHCTTCCEESS
T ss_pred HHCcccCeECC
Confidence 77888888763
No 401
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.07 E-value=5.2e-06 Score=92.34 Aligned_cols=58 Identities=21% Similarity=0.161 Sum_probs=26.5
Q ss_pred EEEEEeCCCCCcccCCccccCccccceecccC-CcCCCCCCC-ccccccccEeecCCcccc
Q 002358 415 ITKIALSGKNLKGEIPPELKNMEALTELWLDG-NFLTGPLPD-MSRLIDLRIVHLENNELT 473 (931)
Q Consensus 415 l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~-N~l~g~~p~-~~~l~~L~~L~L~~N~l~ 473 (931)
++.|+|++|+|+ .||+.++..++|+.|+|++ |.++..+++ |.++++|+.|||++|+|+
T Consensus 156 l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 156 SVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp CEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred hhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 444555555554 4444444444455555543 223322222 445555555555555555
No 402
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.93 E-value=1.7e-05 Score=88.22 Aligned_cols=79 Identities=4% Similarity=0.017 Sum_probs=56.6
Q ss_pred ccc-CccCcEEEEEEEEC-------CCcEEEEEEccCcc---chhhhhHHHHHHHHHhcC-C--CCCcceeEEEecC---
Q 002358 615 KKI-GKGSFGSVYYGKMK-------DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIH-H--RNLVPLIGYCEEE--- 677 (931)
Q Consensus 615 ~~L-G~G~fG~Vy~a~~~-------~g~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~-H--pnIv~l~g~~~~~--- 677 (931)
+.| +.|....+|+.... +++.+++|+..... ......+.+|+.+++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 88999999998765 26788999865432 111256788999999885 3 3567788887665
Q ss_pred CeEEEEEEecCCCCHH
Q 002358 678 HQRILVYEYMHNGTLR 693 (931)
Q Consensus 678 ~~~~lV~E~~~~gsL~ 693 (931)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3568999999886654
No 403
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.89 E-value=3.5e-05 Score=86.12 Aligned_cols=73 Identities=8% Similarity=0.121 Sum_probs=55.7
Q ss_pred ccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCC--CcceeEEEecC-CeEEEEEEecCCC
Q 002358 614 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIGYCEEE-HQRILVYEYMHNG 690 (931)
Q Consensus 614 ~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~Hpn--Iv~l~g~~~~~-~~~~lV~E~~~~g 690 (931)
.+.++.|....+|+... +++.+++|+.... ..+.+|+.+++.+.... +.++++++... +..++||||++|.
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 35688999999999886 4889999987532 25888999999986433 55677776654 6689999999976
Q ss_pred CH
Q 002358 691 TL 692 (931)
Q Consensus 691 sL 692 (931)
.+
T Consensus 120 ~l 121 (362)
T 3ovc_A 120 TL 121 (362)
T ss_dssp ET
T ss_pred Cc
Confidence 54
No 404
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=97.82 E-value=4e-07 Score=105.00 Aligned_cols=105 Identities=19% Similarity=0.162 Sum_probs=64.0
Q ss_pred CcEEEEEeCCCCCccc----CCccccCccccceecccCCcCCCCCC-Ccc-----ccccccEeecCCccccCC----CCC
Q 002358 413 PRITKIALSGKNLKGE----IPPELKNMEALTELWLDGNFLTGPLP-DMS-----RLIDLRIVHLENNELTGS----LPS 478 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~----ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~-----~l~~L~~L~L~~N~l~g~----iP~ 478 (931)
++++.|+|++|++++. ++..+.++++|+.|+|++|.+++..+ .+. ..++|+.|+|++|++++. +|.
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 4677777777777653 56666667777777777777655433 222 225677777777777654 455
Q ss_pred ccCCccccccccccccCCCCCCCcccc-------cCceeeeecCCC
Q 002358 479 YMGSLPNLQELHIENNSFVGEIPPALL-------TGKVIFKYDNNP 517 (931)
Q Consensus 479 ~l~~l~~L~~l~l~~N~l~g~iP~~~~-------~~~~~l~~~~N~ 517 (931)
.+..+++|+.|+|++|++++..+..+. ..+..+.+++|.
T Consensus 336 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~ 381 (461)
T 1z7x_W 336 VLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCD 381 (461)
T ss_dssp HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCC
Confidence 566667777777777777644333222 145555666654
No 405
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=97.77 E-value=1e-06 Score=101.44 Aligned_cols=106 Identities=18% Similarity=0.200 Sum_probs=69.5
Q ss_pred CcEEEEEeCCCCCcccCCccccCc-----cccceecccCCcCCCC----CC-CccccccccEeecCCccccCCCCCccCC
Q 002358 413 PRITKIALSGKNLKGEIPPELKNM-----EALTELWLDGNFLTGP----LP-DMSRLIDLRIVHLENNELTGSLPSYMGS 482 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L-----~~L~~L~Ls~N~l~g~----~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~ 482 (931)
++++.|+|++|.+++..+..+... ++|+.|+|++|.+++. ++ .+..+++|+.|+|++|++++..+..+..
T Consensus 284 ~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 363 (461)
T 1z7x_W 284 ESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQ 363 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHH
T ss_pred CCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHH
Confidence 467788888887765544444433 5777888888877765 23 3566777888888888777554444432
Q ss_pred -----ccccccccccccCCCC----CCCcccc--cCceeeeecCCCC
Q 002358 483 -----LPNLQELHIENNSFVG----EIPPALL--TGKVIFKYDNNPK 518 (931)
Q Consensus 483 -----l~~L~~l~l~~N~l~g----~iP~~~~--~~~~~l~~~~N~~ 518 (931)
+++|+.|+|++|++++ .+|..+. ..+..+.+++|+.
T Consensus 364 ~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i 410 (461)
T 1z7x_W 364 GLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCL 410 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSC
T ss_pred HHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCC
Confidence 5677788888887775 5665543 3566677777754
No 406
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.64 E-value=2.9e-05 Score=85.41 Aligned_cols=91 Identities=15% Similarity=0.127 Sum_probs=78.1
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-Ccccccccc-EeecCCccccCCCC-CccCCccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLR-IVHLENNELTGSLP-SYMGSLPNLQEL 489 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~-~L~L~~N~l~g~iP-~~l~~l~~L~~l 489 (931)
++|+.|+|++|+++..-+..|.+|++|+.|+|++| ++.+.+ .|.++++|+ .|+|.+ +++ .|+ ..|.+|++|+.|
T Consensus 226 ~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 226 PNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDNLRYV 302 (329)
T ss_dssp TTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTTEEEE
T ss_pred CCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCccCCEE
Confidence 48999999999999444456999999999999998 776666 599999999 999998 777 555 679999999999
Q ss_pred cccccCCCCCCCcccccC
Q 002358 490 HIENNSFVGEIPPALLTG 507 (931)
Q Consensus 490 ~l~~N~l~g~iP~~~~~~ 507 (931)
++++|+++ .|+...+.+
T Consensus 303 ~l~~n~i~-~I~~~aF~~ 319 (329)
T 3sb4_A 303 LATGDKIT-TLGDELFGN 319 (329)
T ss_dssp EECSSCCC-EECTTTTCT
T ss_pred EeCCCccC-ccchhhhcC
Confidence 99999999 888877653
No 407
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.63 E-value=8.6e-05 Score=81.60 Aligned_cols=140 Identities=16% Similarity=0.232 Sum_probs=79.9
Q ss_pred cccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCC--CCCcceeE------EEecCCeEEEEEEe
Q 002358 615 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHH--RNLVPLIG------YCEEEHQRILVYEY 686 (931)
Q Consensus 615 ~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H--pnIv~l~g------~~~~~~~~~lV~E~ 686 (931)
+.|+.|..+.||+....+| .+++|+.... ...+..|..+++.|.. -.+.+++. +....+..+++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 3466677889999987654 5889988652 2334456666665531 12333332 12345678899999
Q ss_pred cCCCCHH--------------HHhccCCC----C-------CCCCHHHH-------------------------------
Q 002358 687 MHNGTLR--------------DRLHGSVN----Q-------KPLDWLTR------------------------------- 710 (931)
Q Consensus 687 ~~~gsL~--------------~~L~~~~~----~-------~~l~~~~~------------------------------- 710 (931)
++|..+. ..+|.... . ....|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986431 11221100 0 01123211
Q ss_pred HHHHHHHHHHhHHhhh----------cCCCCeEecCCCCCCccccCCCceEEecccccc
Q 002358 711 LQIAHDAAKGLEYLHT----------GCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 759 (931)
Q Consensus 711 ~~i~~qia~aL~yLH~----------~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~ 759 (931)
..+..++.+++.+|++ .....++|||+++.|||++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223445666652 124789999999999999888889999999764
No 408
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.60 E-value=0.00014 Score=82.13 Aligned_cols=75 Identities=15% Similarity=0.187 Sum_probs=49.8
Q ss_pred ccccCccCcEEEEEEEEC-CCcEEEEEEccCccc-------hhhhhHHHHHHHHHhcCC--CC-CcceeEEEecCCeEEE
Q 002358 614 CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-------HRTQQFVTEVALLSRIHH--RN-LVPLIGYCEEEHQRIL 682 (931)
Q Consensus 614 ~~~LG~G~fG~Vy~a~~~-~g~~vAvK~~~~~~~-------~~~~~~~~E~~il~~l~H--pn-Iv~l~g~~~~~~~~~l 682 (931)
.+.||.|..+.||++... +++.++||....... .....+..|.++++.+.. +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 357999999999999765 468999998654321 123456789999988842 33 3455544 3344689
Q ss_pred EEEecCCC
Q 002358 683 VYEYMHNG 690 (931)
Q Consensus 683 V~E~~~~g 690 (931)
|||++++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 409
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.51 E-value=4.5e-06 Score=93.82 Aligned_cols=61 Identities=25% Similarity=0.226 Sum_probs=27.4
Q ss_pred cccceecccCCcCCCC----CC-CccccccccEeecCCccccC----CCCCccCCccccccccccccCCC
Q 002358 437 EALTELWLDGNFLTGP----LP-DMSRLIDLRIVHLENNELTG----SLPSYMGSLPNLQELHIENNSFV 497 (931)
Q Consensus 437 ~~L~~L~Ls~N~l~g~----~p-~~~~l~~L~~L~L~~N~l~g----~iP~~l~~l~~L~~l~l~~N~l~ 497 (931)
++|+.|+|++|.|+.. ++ .+..+++|+.|+|++|+|+. .+++.+..+++|+.|+|++|.|+
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 4455555555544331 11 12344455555555555442 12333444445555555555554
No 410
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.50 E-value=5.3e-06 Score=93.18 Aligned_cols=86 Identities=22% Similarity=0.199 Sum_probs=70.9
Q ss_pred CcEEEEEeCCCCCcc----cCCccccCccccceecccCCcCCCCC----C-CccccccccEeecCCccccC----CCCCc
Q 002358 413 PRITKIALSGKNLKG----EIPPELKNMEALTELWLDGNFLTGPL----P-DMSRLIDLRIVHLENNELTG----SLPSY 479 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g----~ip~~~~~L~~L~~L~Ls~N~l~g~~----p-~~~~l~~L~~L~L~~N~l~g----~iP~~ 479 (931)
++|+.|+|++|.|+. .++..+..+++|++|+|++|+|+..- + .+..+++|+.|+|++|+|+. .++..
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 479999999999974 35566788999999999999998642 3 36778899999999999984 34555
Q ss_pred cCCccccccccccccCCCC
Q 002358 480 MGSLPNLQELHIENNSFVG 498 (931)
Q Consensus 480 l~~l~~L~~l~l~~N~l~g 498 (931)
+..+++|+.|+|++|.|+.
T Consensus 235 L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 235 AREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHCSSCCEEECTTSSCCH
T ss_pred HHhCCCCCEEeccCCCCCH
Confidence 6677999999999999973
No 411
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.41 E-value=0.00038 Score=74.84 Aligned_cols=74 Identities=19% Similarity=0.275 Sum_probs=55.1
Q ss_pred ccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCC---CCcceeEEEecCCeEEEEEEecCCC
Q 002358 614 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR---NLVPLIGYCEEEHQRILVYEYMHNG 690 (931)
Q Consensus 614 ~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~Hp---nIv~l~g~~~~~~~~~lV~E~~~~g 690 (931)
.+.+|.|..+.||+.++.||+.|++|+...........|.+|++.|+.|... -+.++++.. ..++||||++++
T Consensus 20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~~ 95 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeeccc
Confidence 3668999999999999999999999987654333345688999999988421 244455442 237899999876
Q ss_pred C
Q 002358 691 T 691 (931)
Q Consensus 691 s 691 (931)
.
T Consensus 96 ~ 96 (288)
T 3f7w_A 96 P 96 (288)
T ss_dssp C
T ss_pred C
Confidence 4
No 412
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.35 E-value=0.00063 Score=74.20 Aligned_cols=137 Identities=18% Similarity=0.230 Sum_probs=91.2
Q ss_pred cccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcC---CCCCcceeEEEecCCeEEEEEEecCCCC
Q 002358 615 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH---HRNLVPLIGYCEEEHQRILVYEYMHNGT 691 (931)
Q Consensus 615 ~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~---HpnIv~l~g~~~~~~~~~lV~E~~~~gs 691 (931)
+.|+.|....+|+... +++.+++|+.... ....+.+|++.|+.|. ...+.++++++...+..++||||+++..
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 4689999999999886 4778899986532 3566889999999884 3568888888888888999999999875
Q ss_pred HH--------H---HhccCCCCC-------------------CCCHHHHH---HHH----------------HHHHHHh-
Q 002358 692 LR--------D---RLHGSVNQK-------------------PLDWLTRL---QIA----------------HDAAKGL- 721 (931)
Q Consensus 692 L~--------~---~L~~~~~~~-------------------~l~~~~~~---~i~----------------~qia~aL- 721 (931)
+. . .|+...... .-+|.... ++. .++++.+
T Consensus 118 ~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~ 197 (312)
T 3jr1_A 118 NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVA 197 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 31 1 233221100 12344321 111 1111111
Q ss_pred HHhhh-cCCCCeEecCCCCCCccccCCCceEEeccc
Q 002358 722 EYLHT-GCNPGIIHRDVKSSNILLDINMRAKVSDFG 756 (931)
Q Consensus 722 ~yLH~-~~~~~ivH~DIkp~NILld~~~~vkL~DFG 756 (931)
..|.. .....++|+|+.+.|++++.++ +.|.|+.
T Consensus 198 ~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 198 DTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23321 1247899999999999999887 8899974
No 413
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.34 E-value=0.00027 Score=80.59 Aligned_cols=80 Identities=11% Similarity=0.105 Sum_probs=49.3
Q ss_pred CCCeEecCCCCCCccccCCCceEEecccccccccccccccccccccCCCccCCCccCCC---CCCccchhHHHHHHHHHH
Q 002358 729 NPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ---QLTEKSDVYSFGVVLLEL 805 (931)
Q Consensus 729 ~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~---~~s~ksDVwSlGvlL~eL 805 (931)
...++|||+++.|||++.++ ++|.||+.+..-.....-......-...|++|+..... ......++......+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 47899999999999998876 99999998875332111100000011345666554321 112245566888888888
Q ss_pred HhCC
Q 002358 806 ISGK 809 (931)
Q Consensus 806 ltG~ 809 (931)
+.+.
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7753
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.23 E-value=1.4e-05 Score=80.52 Aligned_cols=105 Identities=20% Similarity=0.277 Sum_probs=74.1
Q ss_pred CcEEEEEeCCC-CCccc----CCccccCccccceecccCCcCCCCCC-----CccccccccEeecCCccccCC----CCC
Q 002358 413 PRITKIALSGK-NLKGE----IPPELKNMEALTELWLDGNFLTGPLP-----DMSRLIDLRIVHLENNELTGS----LPS 478 (931)
Q Consensus 413 ~~l~~L~L~~n-~l~g~----ip~~~~~L~~L~~L~Ls~N~l~g~~p-----~~~~l~~L~~L~L~~N~l~g~----iP~ 478 (931)
+.|++|+|++| .|... +...+...++|++|+|++|+|...-- .+...+.|+.|+|++|+|+.. +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 47899999998 88632 45567777899999999999865321 255667899999999998843 566
Q ss_pred ccCCccccccccc--cccCCCCCCCcccc------cCceeeeecCCC
Q 002358 479 YMGSLPNLQELHI--ENNSFVGEIPPALL------TGKVIFKYDNNP 517 (931)
Q Consensus 479 ~l~~l~~L~~l~l--~~N~l~g~iP~~~~------~~~~~l~~~~N~ 517 (931)
.+...++|+.|+| ++|.|...--..+. ..+..+.+++|.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~ 162 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 162 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCC
Confidence 7777888999999 78988732111111 145566666654
No 415
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.15 E-value=0.00021 Score=78.50 Aligned_cols=38 Identities=16% Similarity=0.162 Sum_probs=22.7
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCC
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTG 451 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g 451 (931)
.+|++|+|.+ +++..-+..|.+|++|+.|+|++|.+..
T Consensus 101 ~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~ 138 (329)
T 3sb4_A 101 QTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPN 138 (329)
T ss_dssp TTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCE
T ss_pred CCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccc
Confidence 3566677766 6663333456667777777777766543
No 416
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.08 E-value=3.2e-05 Score=92.00 Aligned_cols=105 Identities=15% Similarity=0.084 Sum_probs=59.0
Q ss_pred CcEEEEEeC----CCCCccc-----CCccccCccccceecccCC--cCCCCCC-Ccc-ccccccEeecCCccccC-CCCC
Q 002358 413 PRITKIALS----GKNLKGE-----IPPELKNMEALTELWLDGN--FLTGPLP-DMS-RLIDLRIVHLENNELTG-SLPS 478 (931)
Q Consensus 413 ~~l~~L~L~----~n~l~g~-----ip~~~~~L~~L~~L~Ls~N--~l~g~~p-~~~-~l~~L~~L~L~~N~l~g-~iP~ 478 (931)
++|+.|+|+ .|.+++. ++..+.++++|+.|+|+++ .+++..+ .+. .+++|+.|+|++|++++ .++.
T Consensus 403 ~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 482 (592)
T 3ogk_B 403 KNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLME 482 (592)
T ss_dssp CSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHH
T ss_pred CCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHH
Confidence 456677774 5566542 3333556677777777532 3444433 232 36667777777777664 3444
Q ss_pred ccCCccccccccccccCCCCCCCccc---ccCceeeeecCCC
Q 002358 479 YMGSLPNLQELHIENNSFVGEIPPAL---LTGKVIFKYDNNP 517 (931)
Q Consensus 479 ~l~~l~~L~~l~l~~N~l~g~iP~~~---~~~~~~l~~~~N~ 517 (931)
.+..+++|+.|+|++|.|++.....+ ...+..+.+++|.
T Consensus 483 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 483 FSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp HHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred HHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 55666777777777777654322222 2355566666665
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=96.90 E-value=4.6e-05 Score=76.55 Aligned_cols=85 Identities=15% Similarity=0.246 Sum_probs=68.3
Q ss_pred CcEEEEEeCCCCCccc----CCccccCccccceecccCCcCCCC----CC-CccccccccEeec--CCccccCC----CC
Q 002358 413 PRITKIALSGKNLKGE----IPPELKNMEALTELWLDGNFLTGP----LP-DMSRLIDLRIVHL--ENNELTGS----LP 477 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~----ip~~~~~L~~L~~L~Ls~N~l~g~----~p-~~~~l~~L~~L~L--~~N~l~g~----iP 477 (931)
++|++|+|++|.|... +...+...+.|++|+|++|.|... +. .+...+.|+.|+| ++|.|+.. +.
T Consensus 65 ~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~ 144 (185)
T 1io0_A 65 TYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIA 144 (185)
T ss_dssp CSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHH
T ss_pred CCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHH
Confidence 4799999999999742 445566678999999999999864 22 4777889999999 88999843 44
Q ss_pred CccCCccccccccccccCCC
Q 002358 478 SYMGSLPNLQELHIENNSFV 497 (931)
Q Consensus 478 ~~l~~l~~L~~l~l~~N~l~ 497 (931)
+.+...++|+.|+|++|.+.
T Consensus 145 ~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 145 NMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCcCEEeccCCCCC
Confidence 55666789999999999986
No 418
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.80 E-value=0.00032 Score=83.30 Aligned_cols=55 Identities=5% Similarity=-0.010 Sum_probs=22.0
Q ss_pred cEEEEEeCCCCCc----ccCCccccCccccceecccCCcCCCCCCCccccccccEeecC
Q 002358 414 RITKIALSGKNLK----GEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLE 468 (931)
Q Consensus 414 ~l~~L~L~~n~l~----g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~ 468 (931)
+|+.|+|++|+++ +.++..+.++++|+.|+|++|.+.+....+.++++|+.|+++
T Consensus 193 ~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~ 251 (592)
T 3ogk_B 193 SLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGG 251 (592)
T ss_dssp CCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHHCTTCCEEEEC
T ss_pred CccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhhhhHHHhhccc
Confidence 3444444444443 222333334444444444444444322223334444444443
No 419
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.75 E-value=0.0026 Score=72.64 Aligned_cols=70 Identities=16% Similarity=0.313 Sum_probs=49.6
Q ss_pred cccCccCcEEEEEEEECC--------CcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCC-cceeEEEecCCeEEEEEE
Q 002358 615 KKIGKGSFGSVYYGKMKD--------GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNL-VPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 615 ~~LG~G~fG~Vy~a~~~~--------g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnI-v~l~g~~~~~~~~~lV~E 685 (931)
+.|+.|....+|+....+ ++.+++|+...... ...+.+|..+++.|...++ .++++.+.+ .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 568888889999998763 57899998754211 1456689999998853344 567776543 38999
Q ss_pred ecCCC
Q 002358 686 YMHNG 690 (931)
Q Consensus 686 ~~~~g 690 (931)
|++|.
T Consensus 153 ~l~G~ 157 (429)
T 1nw1_A 153 YIPSR 157 (429)
T ss_dssp CCCEE
T ss_pred EeCCc
Confidence 99863
No 420
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.73 E-value=0.00015 Score=86.11 Aligned_cols=102 Identities=12% Similarity=0.156 Sum_probs=72.5
Q ss_pred CcEEEEEeCCCCCcccCCcccc-CccccceecccCC-cCCCC-CCC-ccccccccEeecCCccccCCCCCcc----CCcc
Q 002358 413 PRITKIALSGKNLKGEIPPELK-NMEALTELWLDGN-FLTGP-LPD-MSRLIDLRIVHLENNELTGSLPSYM----GSLP 484 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~-~L~~L~~L~Ls~N-~l~g~-~p~-~~~l~~L~~L~L~~N~l~g~iP~~l----~~l~ 484 (931)
++|++|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++. +.++++|+.|+|++|.+++..+..+ ..++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4788899999888877777776 6889999999888 55442 344 3478889999999988886554444 3667
Q ss_pred ccccccccccCCCCCCCccc-------ccCceeeeecCC
Q 002358 485 NLQELHIENNSFVGEIPPAL-------LTGKVIFKYDNN 516 (931)
Q Consensus 485 ~L~~l~l~~N~l~g~iP~~~-------~~~~~~l~~~~N 516 (931)
+|+.|+|++|. +.++... ...+..+.+.+|
T Consensus 185 ~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 185 SLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred cCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 88999998887 2443321 235666777666
No 421
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.68 E-value=0.0035 Score=67.63 Aligned_cols=138 Identities=14% Similarity=0.104 Sum_probs=76.1
Q ss_pred ccccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCC-cceeEEEecCCeEEEEEEec-CCCC
Q 002358 614 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNL-VPLIGYCEEEHQRILVYEYM-HNGT 691 (931)
Q Consensus 614 ~~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnI-v~l~g~~~~~~~~~lV~E~~-~~gs 691 (931)
.+.|+.|....+|+. +.+++|+...... ......+|+.+++.+....+ .++++++ .+..++++||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 467888999999998 5688888764321 12234568888888853333 3555543 33347899999 5543
Q ss_pred HHH------------------HhccCCCC--CCCCH-HHHHHHHHH--------------HHHHhH----Hhh-hcCCCC
Q 002358 692 LRD------------------RLHGSVNQ--KPLDW-LTRLQIAHD--------------AAKGLE----YLH-TGCNPG 731 (931)
Q Consensus 692 L~~------------------~L~~~~~~--~~l~~-~~~~~i~~q--------------ia~aL~----yLH-~~~~~~ 731 (931)
+.. .+|..... ..... ..+..+... +.+.+. .|. ......
T Consensus 95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 174 (301)
T 3dxq_A 95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA 174 (301)
T ss_dssp CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence 321 11211100 00111 111111100 111111 111 112356
Q ss_pred eEecCCCCCCccccCCCceEEeccccccc
Q 002358 732 IIHRDVKSSNILLDINMRAKVSDFGLSRQ 760 (931)
Q Consensus 732 ivH~DIkp~NILld~~~~vkL~DFGla~~ 760 (931)
++|+|+.+.||+ ..++.+.|+||..+..
T Consensus 175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 175 ACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp EECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 899999999999 6677789999987754
No 422
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.58 E-value=0.0091 Score=65.33 Aligned_cols=141 Identities=12% Similarity=0.063 Sum_probs=74.2
Q ss_pred cccCccCcEE-EEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCC--CCCcceeEEEecCCeEEEEEEecCCCC
Q 002358 615 KKIGKGSFGS-VYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHH--RNLVPLIGYCEEEHQRILVYEYMHNGT 691 (931)
Q Consensus 615 ~~LG~G~fG~-Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H--pnIv~l~g~~~~~~~~~lV~E~~~~gs 691 (931)
+.|+.|+... +|+....+|+.+++|...... ...+..|+++++.+.. -.+.+++.+....+ +++||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4566565554 567665447788888654321 1345567777777742 23556666644433 78999997766
Q ss_pred HHHHhccC---------------------CCC--CCCCHHHHH-------HHH-------------HHHHHHhHHhh---
Q 002358 692 LRDRLHGS---------------------VNQ--KPLDWLTRL-------QIA-------------HDAAKGLEYLH--- 725 (931)
Q Consensus 692 L~~~L~~~---------------------~~~--~~l~~~~~~-------~i~-------------~qia~aL~yLH--- 725 (931)
+.+.+... ... ..++..... .+. ..+.+.++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 65433211 000 111111100 000 01111222221
Q ss_pred hcCCCCeEecCCCCCCccccCC----CceEEeccccccc
Q 002358 726 TGCNPGIIHRDVKSSNILLDIN----MRAKVSDFGLSRQ 760 (931)
Q Consensus 726 ~~~~~~ivH~DIkp~NILld~~----~~vkL~DFGla~~ 760 (931)
......++|||+.+.||+++.+ +.+.|.||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1124689999999999999874 6789999998764
No 423
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.56 E-value=0.00011 Score=87.14 Aligned_cols=105 Identities=15% Similarity=0.127 Sum_probs=72.4
Q ss_pred CcEEEEEeC--C----CCCcc-----cCCccccCccccceecccCCcCCCCCC-Cccc-cccccEeecCCccccCCCCCc
Q 002358 413 PRITKIALS--G----KNLKG-----EIPPELKNMEALTELWLDGNFLTGPLP-DMSR-LIDLRIVHLENNELTGSLPSY 479 (931)
Q Consensus 413 ~~l~~L~L~--~----n~l~g-----~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~-l~~L~~L~L~~N~l~g~iP~~ 479 (931)
++|+.|+|+ + +++++ .++..+.++++|+.|+|++ .+++..+ .+.. +++|+.|+|++|.+++..+..
T Consensus 397 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~ 475 (594)
T 2p1m_B 397 PNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHH 475 (594)
T ss_dssp TTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHH
T ss_pred CCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHH
Confidence 578888888 4 55552 2222367788899999977 5555443 4554 888999999999887665555
Q ss_pred c-CCccccccccccccCCCCCCCccc---ccCceeeeecCCCC
Q 002358 480 M-GSLPNLQELHIENNSFVGEIPPAL---LTGKVIFKYDNNPK 518 (931)
Q Consensus 480 l-~~l~~L~~l~l~~N~l~g~iP~~~---~~~~~~l~~~~N~~ 518 (931)
+ ..+++|+.|+|++|.+++..+..+ ...+..+.+++|+.
T Consensus 476 l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 476 VLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred HHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 5 668889999999998864433322 23667777888764
No 424
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.52 E-value=0.0095 Score=64.67 Aligned_cols=142 Identities=14% Similarity=0.194 Sum_probs=79.6
Q ss_pred cccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCC--CcceeEE------EecCCeEEEEEEe
Q 002358 615 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIGY------CEEEHQRILVYEY 686 (931)
Q Consensus 615 ~~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~Hpn--Iv~l~g~------~~~~~~~~lV~E~ 686 (931)
+.|+.|....+|+....+| .+++|+.... .....+..|+.+++.+.... +.+++.. ....+..+++++|
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 4577788899999987755 6888987652 12345667888888774222 2333321 1223567899999
Q ss_pred cCCCCHHH--------------HhccC---CCCC---C---CCHHHHHHH------------HHHHHHHhHHhhhc----
Q 002358 687 MHNGTLRD--------------RLHGS---VNQK---P---LDWLTRLQI------------AHDAAKGLEYLHTG---- 727 (931)
Q Consensus 687 ~~~gsL~~--------------~L~~~---~~~~---~---l~~~~~~~i------------~~qia~aL~yLH~~---- 727 (931)
++|..+.. .++.. .... . ..|.....- ...+.+.++.+++.
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 98854310 12211 0000 0 112221100 01133445555431
Q ss_pred CCCCeEecCCCCCCccccCCCceEEecccccc
Q 002358 728 CNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 759 (931)
Q Consensus 728 ~~~~ivH~DIkp~NILld~~~~vkL~DFGla~ 759 (931)
....++|+|+++.|||++++..+.|+||+.+.
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 23579999999999999887666899998765
No 425
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.39 E-value=0.0089 Score=66.86 Aligned_cols=141 Identities=17% Similarity=0.196 Sum_probs=84.5
Q ss_pred cccCccCcEEEEEEEEC--------CCcEEEEEEccCccchhhhhHHHHHHHHHhcC-CCCCcceeEEEecCCeEEEEEE
Q 002358 615 KKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 615 ~~LG~G~fG~Vy~a~~~--------~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~g~~~~~~~~~lV~E 685 (931)
+.|..|....+|+.... +++.+++|+.... ........+|.++++.|. +.-..++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 46777888889998875 2578999986432 223455678999999885 3333566766654 29999
Q ss_pred ecCCCCHHH-----------------HhccCC--CCCCCC--HHHHHHHHHHHHH-------------------HhHHhh
Q 002358 686 YMHNGTLRD-----------------RLHGSV--NQKPLD--WLTRLQIAHDAAK-------------------GLEYLH 725 (931)
Q Consensus 686 ~~~~gsL~~-----------------~L~~~~--~~~~l~--~~~~~~i~~qia~-------------------aL~yLH 725 (931)
|++|..|.. .||... ..+... +.++.++..++.. .+..|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 998754421 122211 112222 4455555554432 123332
Q ss_pred h-----cCCCCeEecCCCCCCccccCC----CceEEeccccccc
Q 002358 726 T-----GCNPGIIHRDVKSSNILLDIN----MRAKVSDFGLSRQ 760 (931)
Q Consensus 726 ~-----~~~~~ivH~DIkp~NILld~~----~~vkL~DFGla~~ 760 (931)
+ .....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1 124578999999999999876 7899999997753
No 426
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.39 E-value=0.0033 Score=59.06 Aligned_cols=55 Identities=31% Similarity=0.408 Sum_probs=37.5
Q ss_pred EEEeCCCCCc-ccCCccccCccccceecccCCcCCCCCCC-ccccccccEeecCCcccc
Q 002358 417 KIALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELT 473 (931)
Q Consensus 417 ~L~L~~n~l~-g~ip~~~~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~ 473 (931)
.++.++++|+ ..+|..|. ++|+.|+|++|+|+...+. |..|++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 6778888886 45665432 3577777777777776663 667777777777777654
No 427
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.39 E-value=0.013 Score=63.83 Aligned_cols=141 Identities=12% Similarity=0.174 Sum_probs=80.5
Q ss_pred ccCccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcCCCC--CcceeEE-----EecCCeEEEEEEecC
Q 002358 616 KIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIGY-----CEEEHQRILVYEYMH 688 (931)
Q Consensus 616 ~LG~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~Hpn--Iv~l~g~-----~~~~~~~~lV~E~~~ 688 (931)
.++ |....||+....+|+.+++|+..... .....+..|..+++.+.... +.+++.. ....+..++++|+++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 466 77789999887778889999986431 12346677888888874222 3334432 122455678999998
Q ss_pred CCCHH-----------H---HhccC---C---CCCCCCHHHH----HHH---------------HHHHHHHhHHhhh---
Q 002358 689 NGTLR-----------D---RLHGS---V---NQKPLDWLTR----LQI---------------AHDAAKGLEYLHT--- 726 (931)
Q Consensus 689 ~gsL~-----------~---~L~~~---~---~~~~l~~~~~----~~i---------------~~qia~aL~yLH~--- 726 (931)
|..+. . .++.. . .....++... ..+ ...+.+.++.+.+
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 74321 1 11110 0 0111222111 000 0011112222221
Q ss_pred -cCCCCeEecCCCCCCccccCCCceEEeccccccc
Q 002358 727 -GCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 760 (931)
Q Consensus 727 -~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~ 760 (931)
.....++|||+++.|||++ + .+.|.||+.+..
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1246789999999999999 4 899999987653
No 428
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.19 E-value=0.0078 Score=66.97 Aligned_cols=72 Identities=13% Similarity=0.191 Sum_probs=45.3
Q ss_pred cccCccCcEEEEEEEECC---------CcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCC-cceeEEEecCCeEEEEE
Q 002358 615 KKIGKGSFGSVYYGKMKD---------GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNL-VPLIGYCEEEHQRILVY 684 (931)
Q Consensus 615 ~~LG~G~fG~Vy~a~~~~---------g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnI-v~l~g~~~~~~~~~lV~ 684 (931)
+.|+.|....+|+....+ ++.+++|+..... ........|.++++.+...++ .++++... .++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEecC----CcEEE
Confidence 567888888999998764 2689999875432 112234678888888853343 46665542 26899
Q ss_pred EecCCCC
Q 002358 685 EYMHNGT 691 (931)
Q Consensus 685 E~~~~gs 691 (931)
||++|..
T Consensus 114 e~i~G~~ 120 (369)
T 3c5i_A 114 EWLYGDP 120 (369)
T ss_dssp ECCCSEE
T ss_pred EEecCCc
Confidence 9998743
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.18 E-value=0.00054 Score=67.87 Aligned_cols=83 Identities=11% Similarity=0.081 Sum_probs=63.0
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCc-CCCCC-CCcccc----ccccEeecCCcc-ccCCCCCccCCccc
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNF-LTGPL-PDMSRL----IDLRIVHLENNE-LTGSLPSYMGSLPN 485 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~-l~g~~-p~~~~l----~~L~~L~L~~N~-l~g~iP~~l~~l~~ 485 (931)
-+|++|||+++.++..-=..+..+++|+.|+|+++. |+..- ..++.+ ++|+.|+|++|. +|..==..|.+|++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999875434567899999999999985 55422 235554 479999999985 76332335778999
Q ss_pred cccccccccC
Q 002358 486 LQELHIENNS 495 (931)
Q Consensus 486 L~~l~l~~N~ 495 (931)
|+.|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999875
No 430
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.10 E-value=0.017 Score=66.31 Aligned_cols=72 Identities=10% Similarity=0.072 Sum_probs=47.9
Q ss_pred cccCccCcEEEEEEEECC-CcEEEEEEccCccchhhhhHHHHHHHHHhcCCCCC-cceeEEEecCCeEEEEEEecCCCC
Q 002358 615 KKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNL-VPLIGYCEEEHQRILVYEYMHNGT 691 (931)
Q Consensus 615 ~~LG~G~fG~Vy~a~~~~-g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnI-v~l~g~~~~~~~~~lV~E~~~~gs 691 (931)
+.|+.|....+|+....+ ++.+++|+....... .-.-.+|..+++.|...++ .++++.+. + .+||||++|..
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 568889899999998875 578899987543211 1122589999999965445 46777663 2 35999998743
No 431
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=96.02 E-value=0.00082 Score=74.88 Aligned_cols=105 Identities=14% Similarity=0.238 Sum_probs=61.4
Q ss_pred CcEEEEEeCCCCCcccCCcccc--CccccceecccC--CcCCCC--C----CCc--cccccccEeecCCccccCCCCCcc
Q 002358 413 PRITKIALSGKNLKGEIPPELK--NMEALTELWLDG--NFLTGP--L----PDM--SRLIDLRIVHLENNELTGSLPSYM 480 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~--~L~~L~~L~Ls~--N~l~g~--~----p~~--~~l~~L~~L~L~~N~l~g~iP~~l 480 (931)
++|+.|+|..+++....-..++ +|++|+.|+|+. |...|. + +.+ ..+++|+.|+|.+|.+.+..+..+
T Consensus 193 ~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~l 272 (362)
T 2ra8_A 193 PNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMF 272 (362)
T ss_dssp TTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHH
T ss_pred CCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHH
Confidence 4778888877776544333444 677888887753 222221 1 112 346778888888887764443333
Q ss_pred ---CCccccccccccccCCCCC----CCccc--ccCceeeeecCCC
Q 002358 481 ---GSLPNLQELHIENNSFVGE----IPPAL--LTGKVIFKYDNNP 517 (931)
Q Consensus 481 ---~~l~~L~~l~l~~N~l~g~----iP~~~--~~~~~~l~~~~N~ 517 (931)
..+++|+.|+|+.|.|.+. ++..+ +..+..+.+++|.
T Consensus 273 a~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~ 318 (362)
T 2ra8_A 273 LESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNY 318 (362)
T ss_dssp HHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBB
T ss_pred HhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCc
Confidence 2477788888888877643 22221 2245566666553
No 432
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=95.93 E-value=0.00053 Score=76.44 Aligned_cols=103 Identities=17% Similarity=0.156 Sum_probs=59.2
Q ss_pred CCcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-Cc--cccccccEeecCC--ccccCC-----CCCcc-
Q 002358 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DM--SRLIDLRIVHLEN--NELTGS-----LPSYM- 480 (931)
Q Consensus 412 ~~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~--~~l~~L~~L~L~~--N~l~g~-----iP~~l- 480 (931)
.|+|++|+|++|.-. .+++ + .+++|+.|+|..|.++...- .+ ..+++|+.|+|+. |...|. +-..+
T Consensus 171 ~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp CTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred CCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 467888888776311 3443 3 37788888887777644322 23 3678888888753 222221 11112
Q ss_pred -CCccccccccccccCCCCCCCccc-----ccCceeeeecCCC
Q 002358 481 -GSLPNLQELHIENNSFVGEIPPAL-----LTGKVIFKYDNNP 517 (931)
Q Consensus 481 -~~l~~L~~l~l~~N~l~g~iP~~~-----~~~~~~l~~~~N~ 517 (931)
+.+++|+.|+|.+|.+....+..+ .+.+..+.++.|.
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~ 290 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGV 290 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSC
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCC
Confidence 347788888888887764333222 2356666666664
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=95.78 E-value=0.0085 Score=56.24 Aligned_cols=47 Identities=32% Similarity=0.460 Sum_probs=24.1
Q ss_pred eecccCCcCC-CCCC-CccccccccEeecCCccccCCCCC-ccCCcccccccc
Q 002358 441 ELWLDGNFLT-GPLP-DMSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQELH 490 (931)
Q Consensus 441 ~L~Ls~N~l~-g~~p-~~~~l~~L~~L~L~~N~l~g~iP~-~l~~l~~L~~l~ 490 (931)
.++.++++|+ ..+| .+. .+|+.|+|++|+|+ .||. .|..+++|+.|+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~ 61 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRTAH 61 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEE
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCEEE
Confidence 5666666666 2333 322 24666666666666 4443 334455444443
No 434
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.68 E-value=0.024 Score=62.39 Aligned_cols=68 Identities=13% Similarity=0.244 Sum_probs=44.0
Q ss_pred CccCcEEEEEEEECCCcEEEEEEccCccchhhhhHHHHHHHHHhcC---CCCCcceeEE------EecCCeEEEEEEecC
Q 002358 618 GKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH---HRNLVPLIGY------CEEEHQRILVYEYMH 688 (931)
Q Consensus 618 G~G~fG~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~---HpnIv~l~g~------~~~~~~~~lV~E~~~ 688 (931)
|.|....||+....+| .+++|+...... .+|+.+++.|. -|.+.+++.. ....+..+++|+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 3444679999988777 899998765431 35666666663 1224444432 233567889999999
Q ss_pred CCCH
Q 002358 689 NGTL 692 (931)
Q Consensus 689 ~gsL 692 (931)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8654
No 435
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.21 E-value=0.052 Score=60.95 Aligned_cols=141 Identities=18% Similarity=0.216 Sum_probs=83.1
Q ss_pred cccCccCcEEEEEEEECC--------CcEEEEEEccCccch------------------hhhhHHHHHHHHHhcC-CCCC
Q 002358 615 KKIGKGSFGSVYYGKMKD--------GKEVAVKIMADSCSH------------------RTQQFVTEVALLSRIH-HRNL 667 (931)
Q Consensus 615 ~~LG~G~fG~Vy~a~~~~--------g~~vAvK~~~~~~~~------------------~~~~~~~E~~il~~l~-HpnI 667 (931)
+.|..|-...+|+....+ .+.|.+++.-..... +......|.++++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456668888999988764 368888886442110 1112345888988885 4345
Q ss_pred cceeEEEecCCeEEEEEEecCCCCHHH-----------------HhccCC--CCCCCC--HHHHHHHHHHHHH-------
Q 002358 668 VPLIGYCEEEHQRILVYEYMHNGTLRD-----------------RLHGSV--NQKPLD--WLTRLQIAHDAAK------- 719 (931)
Q Consensus 668 v~l~g~~~~~~~~~lV~E~~~~gsL~~-----------------~L~~~~--~~~~l~--~~~~~~i~~qia~------- 719 (931)
.++++++..+ +|+||+++-+|.. .+|... ..+... +..+.++..++..
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 5677776532 8999998644311 122211 112222 2344444433221
Q ss_pred ---------------HhH----Hhhh-cCCCCeEecCCCCCCccccCC------CceEEecccccc
Q 002358 720 ---------------GLE----YLHT-GCNPGIIHRDVKSSNILLDIN------MRAKVSDFGLSR 759 (931)
Q Consensus 720 ---------------aL~----yLH~-~~~~~ivH~DIkp~NILld~~------~~vkL~DFGla~ 759 (931)
-+. +|.. .....++|+|+.+.||+++.+ +.+.|+||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 121 2222 224578999999999999876 789999998764
No 436
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=95.03 E-value=0.018 Score=64.96 Aligned_cols=99 Identities=15% Similarity=0.173 Sum_probs=63.0
Q ss_pred cEEEEEeCCCCCcccCCccccCccccceecccCCcCCC----CCC--CccccccccEeecCCccccCCCCC-ccCCcccc
Q 002358 414 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTG----PLP--DMSRLIDLRIVHLENNELTGSLPS-YMGSLPNL 486 (931)
Q Consensus 414 ~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g----~~p--~~~~l~~L~~L~L~~N~l~g~iP~-~l~~l~~L 486 (931)
+|+.|.| .++++..-+..|.++++|+.|+|.+|.+.. .++ .|.++++|+.|+|. |+++ .|+. .|.+|++|
T Consensus 249 ~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~-~I~~~aF~~c~~L 325 (401)
T 4fdw_A 249 GITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIR-ILGQGLLGGNRKV 325 (401)
T ss_dssp CCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCC-EECTTTTTTCCSC
T ss_pred CccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceE-EEhhhhhcCCCCc
Confidence 5667777 455663335567778888888887777651 233 37777888888887 3466 5544 56777788
Q ss_pred ccccccccCCCCCCCccccc--CceeeeecCCC
Q 002358 487 QELHIENNSFVGEIPPALLT--GKVIFKYDNNP 517 (931)
Q Consensus 487 ~~l~l~~N~l~g~iP~~~~~--~~~~l~~~~N~ 517 (931)
+.|.|.+| ++ .|+...+. ++..+.+.+|.
T Consensus 326 ~~l~lp~~-l~-~I~~~aF~~~~L~~l~l~~n~ 356 (401)
T 4fdw_A 326 TQLTIPAN-VT-QINFSAFNNTGIKEVKVEGTT 356 (401)
T ss_dssp CEEEECTT-CC-EECTTSSSSSCCCEEEECCSS
T ss_pred cEEEECcc-cc-EEcHHhCCCCCCCEEEEcCCC
Confidence 88877544 55 56665544 45555666653
No 437
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=94.87 E-value=0.027 Score=63.51 Aligned_cols=89 Identities=11% Similarity=0.137 Sum_probs=71.0
Q ss_pred CcEEEEEeCCCCCc-----ccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCC-CccCCccc
Q 002358 413 PRITKIALSGKNLK-----GEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLP-SYMGSLPN 485 (931)
Q Consensus 413 ~~l~~L~L~~n~l~-----g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP-~~l~~l~~ 485 (931)
.+|+.|+|.+|.+. -.-+..|.+|++|+.|+|. |+++.+.. .|.++++|+.|+|.+| ++ .|+ ..|.++ +
T Consensus 271 ~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~-~I~~~aF~~~-~ 346 (401)
T 4fdw_A 271 PELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VT-QINFSAFNNT-G 346 (401)
T ss_dssp TTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CC-EECTTSSSSS-C
T ss_pred CCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-cc-EEcHHhCCCC-C
Confidence 47899999888765 2344679999999999999 45776666 5999999999999666 66 554 578889 9
Q ss_pred cccccccccCCCCCCCccccc
Q 002358 486 LQELHIENNSFVGEIPPALLT 506 (931)
Q Consensus 486 L~~l~l~~N~l~g~iP~~~~~ 506 (931)
|+.|.+++|.+. .++...+.
T Consensus 347 L~~l~l~~n~~~-~l~~~~F~ 366 (401)
T 4fdw_A 347 IKEVKVEGTTPP-QVFEKVWY 366 (401)
T ss_dssp CCEEEECCSSCC-BCCCSSCC
T ss_pred CCEEEEcCCCCc-cccccccc
Confidence 999999999987 67665554
No 438
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=94.86 E-value=0.19 Score=50.99 Aligned_cols=105 Identities=11% Similarity=0.051 Sum_probs=69.3
Q ss_pred CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCCccccCCCceEEecccccccccccccccc
Q 002358 690 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHIS 769 (931)
Q Consensus 690 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~~~~~~~~~~ 769 (931)
-+|.++|.. .+.++++.+++.++.|.+.+|.-+-.. ..-..+=+.|..|++..+|.|.+.+ ..+.
T Consensus 33 vSL~eIL~~--~~~PlsEEqaWALc~Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 33 LSLEEILRL--YNQPINEEQAWAVCYQCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccHHHHHHH--cCCCcCHHHHHHHHHHHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc-cccc----------
Confidence 378999875 367899999999999999998776211 1112334456888999999888764 1110
Q ss_pred cccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 002358 770 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVS 813 (931)
Q Consensus 770 ~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~ 813 (931)
.....+.+||... ...+.+.=|||+|+++|.-+--..|-+
T Consensus 98 ---~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~ 137 (229)
T 2yle_A 98 ---AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKEN 137 (229)
T ss_dssp ------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred ---ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcc
Confidence 0123466888764 345678899999999999988666644
No 439
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.01 E-value=0.17 Score=57.31 Aligned_cols=140 Identities=14% Similarity=0.208 Sum_probs=85.0
Q ss_pred cccCccCcEEEEEEEECC--------CcEEEEEEccCccchhhhhHHHHHHHHHhcCCCC-CcceeEEEecCCeEEEEEE
Q 002358 615 KKIGKGSFGSVYYGKMKD--------GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN-LVPLIGYCEEEHQRILVYE 685 (931)
Q Consensus 615 ~~LG~G~fG~Vy~a~~~~--------g~~vAvK~~~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~l~g~~~~~~~~~lV~E 685 (931)
+.+..|....+|+....+ ++.+++|+..... ...-+..+|.++++.+...+ ..++++.+. -++|+|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 567778888999998763 5889999865432 22223467899998885333 345565432 278999
Q ss_pred ecCCCCHHH-----------------HhccC-------C---CCCCCCHHHHHHHHHHHH-------------------H
Q 002358 686 YMHNGTLRD-----------------RLHGS-------V---NQKPLDWLTRLQIAHDAA-------------------K 719 (931)
Q Consensus 686 ~~~~gsL~~-----------------~L~~~-------~---~~~~l~~~~~~~i~~qia-------------------~ 719 (931)
|++|..|.. .+|.. . ...+.-+.++.++..++- +
T Consensus 151 fI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (424)
T 3mes_A 151 FIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILE 230 (424)
T ss_dssp CCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHH
T ss_pred EeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHH
Confidence 999865310 01110 0 111112444444433221 2
Q ss_pred HhHHhhh---------------------cCCCCeEecCCCCCCccccCCCceEEeccccccc
Q 002358 720 GLEYLHT---------------------GCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 760 (931)
Q Consensus 720 aL~yLH~---------------------~~~~~ivH~DIkp~NILld~~~~vkL~DFGla~~ 760 (931)
.+..|.+ .....++|+|+.+.||+ +.++.+.++||..+..
T Consensus 231 e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 231 EIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 2233321 11356899999999999 8888999999998753
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=91.93 E-value=0.018 Score=57.90 Aligned_cols=83 Identities=13% Similarity=0.177 Sum_probs=59.7
Q ss_pred CcEEEEEeCCC-CCcc----cCCccccCccccceecccCCcCCCCCC-----CccccccccEeecCCccccCC----CCC
Q 002358 413 PRITKIALSGK-NLKG----EIPPELKNMEALTELWLDGNFLTGPLP-----DMSRLIDLRIVHLENNELTGS----LPS 478 (931)
Q Consensus 413 ~~l~~L~L~~n-~l~g----~ip~~~~~L~~L~~L~Ls~N~l~g~~p-----~~~~l~~L~~L~L~~N~l~g~----iP~ 478 (931)
+.|++|+|++| +|.. .|-+.+..-+.|+.|+|++|+|...-- .+..-+.|+.|+|++|+|... |-+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 36889999986 6642 244556777899999999999974321 145567899999999999732 333
Q ss_pred ccCCccccccccccccC
Q 002358 479 YMGSLPNLQELHIENNS 495 (931)
Q Consensus 479 ~l~~l~~L~~l~l~~N~ 495 (931)
.+..-+.|+.|+|++|.
T Consensus 121 aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQR 137 (197)
T ss_dssp HTTTTCCCSEEECCCCS
T ss_pred HHhhCCceeEEECCCCc
Confidence 45555679999998763
No 441
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=89.12 E-value=0.35 Score=53.41 Aligned_cols=88 Identities=14% Similarity=0.145 Sum_probs=60.4
Q ss_pred cEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCC-ccCCccccccccc
Q 002358 414 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQELHI 491 (931)
Q Consensus 414 ~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~-~l~~l~~L~~l~l 491 (931)
.++.+.+..+ +.-.-...|.++++|+.+.|.+|.++.+.. .|.++.+|+.+.|.++ ++ .|.+ .|.+|.+|+.+.+
T Consensus 264 ~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 264 ALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISY 340 (379)
T ss_dssp TCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCC
T ss_pred hhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEE
Confidence 5666777543 552333457788888888888888877666 4888888888888755 55 5654 5788888888887
Q ss_pred cccCCCCCCCccccc
Q 002358 492 ENNSFVGEIPPALLT 506 (931)
Q Consensus 492 ~~N~l~g~iP~~~~~ 506 (931)
..| ++ .|.+..+.
T Consensus 341 p~~-v~-~I~~~aF~ 353 (379)
T 4h09_A 341 PKS-IT-LIESGAFE 353 (379)
T ss_dssp CTT-CC-EECTTTTT
T ss_pred CCc-cC-EEchhHhh
Confidence 654 55 55554443
No 442
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.02 E-value=1.2 Score=49.81 Aligned_cols=30 Identities=30% Similarity=0.383 Sum_probs=25.0
Q ss_pred CeEecCCCCCCccc------cCCCceEEeccccccc
Q 002358 731 GIIHRDVKSSNILL------DINMRAKVSDFGLSRQ 760 (931)
Q Consensus 731 ~ivH~DIkp~NILl------d~~~~vkL~DFGla~~ 760 (931)
.++|+|+.+.|||+ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46799999999999 4567799999988753
No 443
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=87.92 E-value=0.74 Score=51.24 Aligned_cols=96 Identities=13% Similarity=0.216 Sum_probs=49.1
Q ss_pred cEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCC-ccCCccccccccc
Q 002358 414 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQELHI 491 (931)
Q Consensus 414 ~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~-~l~~l~~L~~l~l 491 (931)
.++.+.|.++-.. .-...|.++++|+.+.+. +.++.... .|.++.+|+.++|..| ++ .|.+ .|.+|.+|+.+.|
T Consensus 266 ~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 266 YLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEE
T ss_pred cccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEE
Confidence 4555555443322 333445666666666664 33443333 3666666666666543 44 3433 4566666666666
Q ss_pred cccCCCCCCCccccc---CceeeeecC
Q 002358 492 ENNSFVGEIPPALLT---GKVIFKYDN 515 (931)
Q Consensus 492 ~~N~l~g~iP~~~~~---~~~~l~~~~ 515 (931)
..+ ++ .|.+..+. .+..+.+.+
T Consensus 342 p~s-v~-~I~~~aF~~C~~L~~i~~~~ 366 (394)
T 4gt6_A 342 PSS-VT-KIPESAFSNCTALNNIEYSG 366 (394)
T ss_dssp CTT-CC-BCCGGGGTTCTTCCEEEESS
T ss_pred Ccc-cC-EEhHhHhhCCCCCCEEEECC
Confidence 433 44 55554443 334444443
No 444
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=87.73 E-value=0.081 Score=52.16 Aligned_cols=92 Identities=11% Similarity=0.105 Sum_probs=58.8
Q ss_pred cCCccccCccccceecccCCcCCCC-CCCccccccccEeecCCcc-ccCCCCCccCCc----cccccccccccC-CCCCC
Q 002358 428 EIPPELKNMEALTELWLDGNFLTGP-LPDMSRLIDLRIVHLENNE-LTGSLPSYMGSL----PNLQELHIENNS-FVGEI 500 (931)
Q Consensus 428 ~ip~~~~~L~~L~~L~Ls~N~l~g~-~p~~~~l~~L~~L~L~~N~-l~g~iP~~l~~l----~~L~~l~l~~N~-l~g~i 500 (931)
.+|.....--+|+.|||+++.++.. +..+.++++|+.|+|+++. ++..-=..|+.+ ++|+.|+|+++. ++-.=
T Consensus 52 ~LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~G 131 (176)
T 3e4g_A 52 HLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKG 131 (176)
T ss_dssp GSCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHH
T ss_pred cCCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHH
Confidence 4455433335799999999987654 3357899999999999995 663322345553 479999999975 65100
Q ss_pred Cccc--ccCceeeeecCCCCc
Q 002358 501 PPAL--LTGKVIFKYDNNPKL 519 (931)
Q Consensus 501 P~~~--~~~~~~l~~~~N~~~ 519 (931)
=..+ +..+..+.+.+.+..
T Consensus 132 l~~L~~~~~L~~L~L~~c~~I 152 (176)
T 3e4g_A 132 IIALHHFRNLKYLFLSDLPGV 152 (176)
T ss_dssp HHHGGGCTTCCEEEEESCTTC
T ss_pred HHHHhcCCCCCEEECCCCCCC
Confidence 0001 235566666665543
No 445
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=86.86 E-value=0.5 Score=52.62 Aligned_cols=77 Identities=12% Similarity=0.086 Sum_probs=48.2
Q ss_pred cEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCC-ccCCccccccccc
Q 002358 414 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQELHI 491 (931)
Q Consensus 414 ~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~-~l~~l~~L~~l~l 491 (931)
+|+.+.|.++ ++-.-...|.++++|+.++|.++ ++.+-. .|.++++|+.++|..| ++ .|++ .|.+|++|+.+.|
T Consensus 298 ~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~l 373 (394)
T 4fs7_A 298 SLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVEL 373 (394)
T ss_dssp TCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEEE
T ss_pred cccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEEE
Confidence 5666666543 55223345777777777777643 544444 4777777777777666 55 4543 5677777777777
Q ss_pred ccc
Q 002358 492 ENN 494 (931)
Q Consensus 492 ~~N 494 (931)
..|
T Consensus 374 p~~ 376 (394)
T 4fs7_A 374 PKR 376 (394)
T ss_dssp EGG
T ss_pred CCC
Confidence 544
No 446
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=85.25 E-value=0.83 Score=50.35 Aligned_cols=88 Identities=16% Similarity=0.122 Sum_probs=66.6
Q ss_pred cEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCC-ccCCccccccccc
Q 002358 414 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQELHI 491 (931)
Q Consensus 414 ~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~-~l~~l~~L~~l~l 491 (931)
.|+.+.|..+ ++..-...|.++.+|+.+.+..+ +..... .|.++++|+.+.|.+|.++ .|++ .|.+|.+|+.+.|
T Consensus 241 ~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~-~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 241 ALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIE-TLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp SCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCC-EECTTTTTTCTTCCEEEC
T ss_pred cceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccc-eehhhhhcCCCCCCEEEc
Confidence 6778888765 65344456888999999999754 554444 4899999999999999888 6664 6889999999999
Q ss_pred cccCCCCCCCccccc
Q 002358 492 ENNSFVGEIPPALLT 506 (931)
Q Consensus 492 ~~N~l~g~iP~~~~~ 506 (931)
.++ ++ .|+...+.
T Consensus 318 p~~-l~-~I~~~aF~ 330 (379)
T 4h09_A 318 PTA-LK-TIQVYAFK 330 (379)
T ss_dssp CTT-CC-EECTTTTT
T ss_pred Ccc-cc-EEHHHHhh
Confidence 754 66 67776554
No 447
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=85.23 E-value=0.74 Score=51.20 Aligned_cols=80 Identities=13% Similarity=0.205 Sum_probs=59.8
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCC-ccCCcccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQELH 490 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~-~l~~l~~L~~l~ 490 (931)
..|+.+.+. ++++..-...|.++++|+.++|..| ++.+-. .|.++.+|+.+.|..+ ++ .|.+ .|.+|++|+.++
T Consensus 288 ~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~ 363 (394)
T 4gt6_A 288 PALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIE 363 (394)
T ss_dssp TTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEE
T ss_pred cccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEE
Confidence 367788885 5566333456888999999999765 555444 4889999999999755 66 6664 688999999999
Q ss_pred ccccCC
Q 002358 491 IENNSF 496 (931)
Q Consensus 491 l~~N~l 496 (931)
+.+|..
T Consensus 364 ~~~~~~ 369 (394)
T 4gt6_A 364 YSGSRS 369 (394)
T ss_dssp ESSCHH
T ss_pred ECCcee
Confidence 988754
No 448
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=83.83 E-value=0.071 Score=53.56 Aligned_cols=83 Identities=17% Similarity=0.167 Sum_probs=55.4
Q ss_pred CcEEEEEeCCCCCccc----CCccccCccccceecccCCcCCCCCC-----CccccccccEeecCCccc---cC----CC
Q 002358 413 PRITKIALSGKNLKGE----IPPELKNMEALTELWLDGNFLTGPLP-----DMSRLIDLRIVHLENNEL---TG----SL 476 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~----ip~~~~~L~~L~~L~Ls~N~l~g~~p-----~~~~l~~L~~L~L~~N~l---~g----~i 476 (931)
..|+.|+|++|+|... |...+..-+.|+.|+|++|+|...-- .+..-+.|+.|+|++|.. .. .|
T Consensus 70 ~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~i 149 (197)
T 1pgv_A 70 KHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDM 149 (197)
T ss_dssp SCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHH
T ss_pred CCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHH
Confidence 4799999999999743 23344456899999999999985322 255556799999997643 21 12
Q ss_pred CCccCCccccccccccccC
Q 002358 477 PSYMGSLPNLQELHIENNS 495 (931)
Q Consensus 477 P~~l~~l~~L~~l~l~~N~ 495 (931)
-+.+..-+.|+.|+++.|.
T Consensus 150 a~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 150 MMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHHCSSCCEEECCCCC
T ss_pred HHHHHhCCCcCeEeccCCC
Confidence 2333334566666665544
No 449
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=77.94 E-value=1.1 Score=49.72 Aligned_cols=73 Identities=12% Similarity=0.106 Sum_probs=55.9
Q ss_pred CcEEEEEeCCCCCcccCCccccCccccceecccCCcCCCCCC-CccccccccEeecCCccccCCCCCccCCccccccc
Q 002358 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 489 (931)
Q Consensus 413 ~~l~~L~L~~n~l~g~ip~~~~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~l 489 (931)
.+|++++|.++ ++-.-...|.++++|+.++|..| ++..-. .|.++++|+.++|..| ++ .+...+.++++|+.+
T Consensus 320 ~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 320 TSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 37889999754 76333467999999999999877 665555 5999999999999865 44 455678888888764
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=73.86 E-value=0.41 Score=54.82 Aligned_cols=60 Identities=8% Similarity=0.090 Sum_probs=18.0
Q ss_pred hccccCccCcEEEEEEEECC-CcEEEE------EEccCcc--chhhhhHHHHHHHHHhcCCCCCcceeEEEe
Q 002358 613 FCKKIGKGSFGSVYYGKMKD-GKEVAV------KIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCE 675 (931)
Q Consensus 613 ~~~~LG~G~fG~Vy~a~~~~-g~~vAv------K~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~ 675 (931)
+.+.|| ||.||+|.+.. ..+||| |..+... ......|.+|..+++.++|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 346677 99999999874 367888 7665432 223457889999999999999999988764
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=73.56 E-value=11 Score=38.04 Aligned_cols=115 Identities=12% Similarity=0.131 Sum_probs=79.8
Q ss_pred CCCCCcceeEEEecCCeEEEEEEecCCC-CHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCeEecCCCCCC
Q 002358 663 HHRNLVPLIGYCEEEHQRILVYEYMHNG-TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSN 741 (931)
Q Consensus 663 ~HpnIv~l~g~~~~~~~~~lV~E~~~~g-sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH~DIkp~N 741 (931)
.||+++.. .+-.+.+...+.++.-+.+ ++.. + ...+...+++++.+|+....+++. -+|--++|.|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i------k~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I------KSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G------GGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H------HhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecce
Confidence 58888876 4666666666666654322 2222 2 236778899999999998877764 4899999999
Q ss_pred ccccCCCceEEecccccccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 002358 742 ILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVS 813 (931)
Q Consensus 742 ILld~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~ 813 (931)
++++.++.+++.=.|+--.+ +|. ..++..=.-.+=+++..+++++..|.
T Consensus 110 L~f~~~~~p~i~~RGik~~l------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVV------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTB------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCC------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999877753221 221 11222234467788899999998886
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=63.60 E-value=15 Score=37.15 Aligned_cols=114 Identities=12% Similarity=0.130 Sum_probs=78.3
Q ss_pred CCCCCcceeEEEecCCeEEEEEEecCCC-CHHHHhccCCCCCCCCHHHHHHHHHHHHHHhH-HhhhcCCCCeEecCCCCC
Q 002358 663 HHRNLVPLIGYCEEEHQRILVYEYMHNG-TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLE-YLHTGCNPGIIHRDVKSS 740 (931)
Q Consensus 663 ~HpnIv~l~g~~~~~~~~~lV~E~~~~g-sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~-yLH~~~~~~ivH~DIkp~ 740 (931)
.||++ -..+-.+++...+.++.-+++ ++.. ++ ..+...+++++.+|+.... +++. -+|--++|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~-i~------~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAA-IR------KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHH-HH------TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHH-HH------hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCc
Confidence 57888 444556677777777765443 3443 33 3677888999999988777 6654 588999999
Q ss_pred CccccCCCceEEecccccccccccccccccccccCCCccCCCccCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 002358 741 NILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVS 813 (931)
Q Consensus 741 NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~ 813 (931)
|++++.++.+++.-.|+-.. ++|.-+ ++.-=.-.+=+++..++.++..|+
T Consensus 114 NL~f~~~~~p~i~hRGi~~~------------------lpP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKES------------------LPPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETTT------------------BSSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCccc------------------CCCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999987775322 233221 112223456678888888888775
No 453
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=60.97 E-value=1.2 Score=32.70 Aligned_cols=23 Identities=13% Similarity=0.459 Sum_probs=10.7
Q ss_pred eeeeccchhhhhHHHHHhhhhhe
Q 002358 530 KLILGTSIGVLAILLVLFLCSLI 552 (931)
Q Consensus 530 ~iiv~i~i~v~~vllll~~~~~~ 552 (931)
..+++.++|++++++++++++++
T Consensus 12 ~~Ia~~vVGvll~vi~~l~~~~~ 34 (44)
T 2jwa_A 12 TSIISAVVGILLVVVLGVVFGIL 34 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHhh
Confidence 33566666644333333333333
No 454
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=60.34 E-value=2 Score=31.72 Aligned_cols=6 Identities=33% Similarity=0.733 Sum_probs=2.3
Q ss_pred hhhHHH
Q 002358 539 VLAILL 544 (931)
Q Consensus 539 v~~vll 544 (931)
++++++
T Consensus 21 v~~~~i 26 (44)
T 2ks1_B 21 LLLLLV 26 (44)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 433333
No 455
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=52.77 E-value=2.6 Score=31.03 Aligned_cols=6 Identities=0% Similarity=0.578 Sum_probs=2.3
Q ss_pred hhhHHH
Q 002358 539 VLAILL 544 (931)
Q Consensus 539 v~~vll 544 (931)
++++++
T Consensus 20 v~~v~i 25 (44)
T 2l2t_A 20 LFILVI 25 (44)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 456
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=40.42 E-value=5.9 Score=28.19 Aligned_cols=25 Identities=16% Similarity=0.066 Sum_probs=13.8
Q ss_pred eeeeccchhhhhHHHHHhhhhheee
Q 002358 530 KLILGTSIGVLAILLVLFLCSLIVL 554 (931)
Q Consensus 530 ~iiv~i~i~v~~vllll~~~~~~~~ 554 (931)
..|.++++++++.++++..+.++++
T Consensus 11 GaIAGiVvG~v~gv~li~~l~~~~~ 35 (38)
T 2k1k_A 11 GEIVAVIFGLLLGAALLLGILVFRS 35 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeeeehHHHHHHHHHHHHHHHHe
Confidence 4466777776665554444444433
No 457
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=34.38 E-value=2.6e+02 Score=25.77 Aligned_cols=91 Identities=11% Similarity=0.171 Sum_probs=55.6
Q ss_pred CccceEEeeecCCceeEEEEEEeecCCCCCCCCCcEEEEEcCceeEEEEecCCcc--ceEE-E-EEEecCCCCcccceee
Q 002358 80 NKKYCYNLITKERRRYLVRATFQYGSLGSEASYPKFQLYLDATLWSTVTVLDASR--VYAK-E-MIIRAPSDSIDVCICC 155 (931)
Q Consensus 80 ~~~~cy~l~~~~~~~ylvr~~f~yg~yd~~~~~~~fd~~~~~~~w~~v~~~~~~~--~~~~-e-~~~~~~~~~~~vcl~~ 155 (931)
|..-=|++.+.+.|.|.|+..|.=|. ...-.++|+++|+.-.+|.+..+.. .+.. . -|...++. -.+=|..
T Consensus 38 G~~v~~~V~v~~aG~Y~l~~ryang~----~~~r~~~l~VNG~~~~~v~~p~Tg~W~~w~t~~~~v~L~aG~-ntI~l~~ 112 (145)
T 2w3j_A 38 GASIVWSLSAASAKTYTAQIRFGNGG----TSARRATVVVNDSQIKTLDFPTNSNWTQWQTVNVDIPLKAGT-NSIKLVA 112 (145)
T ss_dssp TCEEEEEEEESSCEEEEEEEEEECCS----SSCCCEEEEETTEEEEEECCCCCSCTTSCEEEEEEEEECSEE-EEEEEEE
T ss_pred CCEEEEEEECCCCeEEEEEEEEECCC----CCCeEEEEEECCeEeeEEEecCCCCCCeeEEEEEEEEECCCc-eEEEEEE
Confidence 44445777777889999988765222 2346899999998877776643221 1211 1 22233333 3344444
Q ss_pred c-CCCCceeeeeeeeecCCCC
Q 002358 156 A-VTGSPFISTLELRPLNLSM 175 (931)
Q Consensus 156 ~-~~~~pfis~le~~~l~~~~ 175 (931)
+ +.|-|-|-.|+|.+.+...
T Consensus 113 ~~~~g~~niD~i~v~~~~~~~ 133 (145)
T 2w3j_A 113 ETADGLANIDSIRVTGNGITP 133 (145)
T ss_dssp CSTTCCCEEEEEEECSTTEEE
T ss_pred ecCcCCEEEEEEEEEcCCCCC
Confidence 3 3567999999998766443
No 458
>1nrp_R Receptor based peptide NR'S; serine proteinase/receptor; 3.00A {Homo sapiens} PDB: 1nrn_R 1nrq_R*
Probab=25.36 E-value=24 Score=21.74 Aligned_cols=16 Identities=38% Similarity=0.906 Sum_probs=13.9
Q ss_pred CcccCCCCCCCCcccc
Q 002358 200 DALRYPDDPYDRIWDS 215 (931)
Q Consensus 200 ~~~~y~~d~~dR~W~~ 215 (931)
...|.|+|.|.-+|+-
T Consensus 6 fllrnpndkyepfwed 21 (26)
T 1nrp_R 6 FLLRNPNDKYEPFWED 21 (26)
T ss_pred hhhcCCCcccCccccc
Confidence 5678999999999975
No 459
>1nro_R Receptor based peptide NRP; serine proteinase/receptor; 3.10A {Homo sapiens}
Probab=23.59 E-value=29 Score=21.54 Aligned_cols=17 Identities=35% Similarity=0.905 Sum_probs=14.3
Q ss_pred CcccCCCCCCCCccccC
Q 002358 200 DALRYPDDPYDRIWDSD 216 (931)
Q Consensus 200 ~~~~y~~d~~dR~W~~~ 216 (931)
...|.|+|.|.-+|+-.
T Consensus 6 fllrnpndkyepfwede 22 (27)
T 1nro_R 6 FLLRNPNDKYEPFWEDE 22 (27)
T ss_pred ccccCCCcccCccccch
Confidence 56799999999999753
Done!