Query 002362
Match_columns 930
No_of_seqs 560 out of 4477
Neff 9.9
Searched_HMMs 13730
Date Mon Mar 25 23:15:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002362.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/002362hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2a5yb3 c.37.1.20 (B:109-385) 100.0 9.6E-40 7E-44 340.6 15.4 247 168-432 18-277 (277)
2 d1ogqa_ c.10.2.8 (A:) Polygala 99.8 6E-20 4.3E-24 195.7 8.4 251 552-835 50-302 (313)
3 d1ogqa_ c.10.2.8 (A:) Polygala 99.8 6.6E-20 4.8E-24 195.4 8.0 225 582-834 50-278 (313)
4 d2omza2 c.10.2.1 (A:33-416) In 99.8 2.8E-18 2E-22 188.6 20.2 80 550-646 42-121 (384)
5 d2omza2 c.10.2.1 (A:33-416) In 99.7 1.9E-17 1.4E-21 181.9 19.4 284 580-901 42-361 (384)
6 d1xkua_ c.10.2.7 (A:) Decorin 99.7 7.2E-17 5.3E-21 170.8 18.7 207 600-834 21-229 (305)
7 d1xkua_ c.10.2.7 (A:) Decorin 99.7 4.1E-16 3E-20 164.9 16.3 250 582-878 31-283 (305)
8 d1p9ag_ c.10.2.7 (G:) von Will 99.6 1.5E-15 1.1E-19 156.7 13.7 184 600-835 21-206 (266)
9 d1ozna_ c.10.2.7 (A:) Reticulo 99.6 4.5E-15 3.2E-19 154.9 13.4 212 600-835 22-236 (284)
10 d1p9ag_ c.10.2.7 (G:) von Will 99.5 2.5E-14 1.9E-18 147.3 14.4 198 610-866 8-207 (266)
11 d1h6ua2 c.10.2.1 (A:36-262) In 99.5 1E-14 7.4E-19 146.5 10.8 189 608-832 37-225 (227)
12 d1jl5a_ c.10.2.6 (A:) Leucine 99.5 9.9E-13 7.2E-17 141.6 21.3 46 852-901 282-334 (353)
13 d1ozna_ c.10.2.7 (A:) Reticulo 99.5 4.7E-14 3.4E-18 146.9 10.3 204 583-815 33-239 (284)
14 d1jl5a_ c.10.2.6 (A:) Leucine 99.4 1.2E-12 8.7E-17 140.9 18.7 131 531-691 40-170 (353)
15 d2omxa2 c.10.2.1 (A:37-235) In 99.4 2.7E-13 2E-17 132.5 11.5 163 609-829 37-199 (199)
16 d1h6ua2 c.10.2.1 (A:36-262) In 99.4 3.9E-13 2.8E-17 134.7 11.6 188 580-810 39-226 (227)
17 d1h6ta2 c.10.2.1 (A:31-240) In 99.4 3.6E-13 2.6E-17 132.8 9.6 55 775-832 154-208 (210)
18 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.4 9.2E-13 6.7E-17 133.5 12.0 93 600-694 19-114 (242)
19 d1h6ta2 c.10.2.1 (A:31-240) In 99.3 1.8E-12 1.3E-16 127.7 10.9 164 582-810 46-209 (210)
20 d2omxa2 c.10.2.1 (A:37-235) In 99.3 3.9E-12 2.8E-16 124.2 13.0 162 580-806 38-199 (199)
21 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.3 1.1E-11 7.7E-16 125.5 12.4 195 614-835 10-212 (242)
22 d2astb2 c.10.1.3 (B:2136-2419) 99.2 2.8E-12 2E-16 132.8 5.6 187 608-834 42-235 (284)
23 d2astb2 c.10.1.3 (B:2136-2419) 99.2 2.9E-12 2.1E-16 132.6 3.8 183 614-838 25-214 (284)
24 d1dcea3 c.10.2.2 (A:444-567) R 99.2 1.3E-11 9.8E-16 109.3 6.5 95 585-690 1-97 (124)
25 d2fnaa2 c.37.1.20 (A:1-283) Ar 99.1 1.3E-10 9.7E-15 120.1 13.6 198 168-388 10-257 (283)
26 d1a9na_ c.10.2.4 (A:) Spliceso 99.1 6.7E-11 4.9E-15 110.3 9.2 127 548-691 14-147 (162)
27 d1dcea3 c.10.2.2 (A:444-567) R 99.1 2.2E-10 1.6E-14 101.3 10.2 99 555-670 1-101 (124)
28 d1a9na_ c.10.2.4 (A:) Spliceso 99.0 1E-10 7.3E-15 109.1 6.7 107 578-694 14-123 (162)
29 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.9 2.5E-11 1.8E-15 135.5 -2.4 154 739-902 223-408 (460)
30 d1m9la_ c.10.3.1 (A:) Outer ar 98.8 4.9E-11 3.5E-15 115.5 -4.0 107 546-669 42-150 (198)
31 d1fnna2 c.37.1.20 (A:1-276) CD 98.8 8.9E-08 6.5E-12 97.9 20.1 176 169-346 15-205 (276)
32 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.8 1.5E-11 1.1E-15 137.3 -10.7 357 530-901 3-436 (460)
33 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.8 3.5E-09 2.6E-13 101.9 7.7 106 552-669 29-136 (192)
34 d1sxjb2 c.37.1.20 (B:7-230) Re 98.7 6.9E-08 5E-12 95.2 15.3 181 170-376 15-199 (224)
35 d1sxjd2 c.37.1.20 (D:26-262) R 98.7 1.2E-07 9E-12 94.4 16.0 194 170-378 12-209 (237)
36 d1m9la_ c.10.3.1 (A:) Outer ar 98.7 1.4E-10 1.1E-14 112.1 -5.8 108 575-693 41-150 (198)
37 d1sxjc2 c.37.1.20 (C:12-238) R 98.7 8.1E-08 5.9E-12 95.0 14.3 180 170-374 14-195 (227)
38 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.7 1.4E-08 1E-12 97.5 8.0 87 601-690 20-109 (192)
39 d1iqpa2 c.37.1.20 (A:2-232) Re 98.6 1.5E-07 1.1E-11 93.3 13.9 179 170-374 24-205 (231)
40 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.6 1.4E-09 1E-13 115.8 -2.7 255 546-835 25-313 (344)
41 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.6 5.6E-10 4E-14 119.0 -6.1 264 577-867 26-315 (344)
42 d1njfa_ c.37.1.20 (A:) delta p 98.5 7.3E-07 5.3E-11 88.4 17.0 193 170-379 12-217 (239)
43 d1r6bx2 c.37.1.20 (X:169-436) 98.5 3.4E-07 2.5E-11 90.7 14.1 154 171-346 19-194 (268)
44 d1sxje2 c.37.1.20 (E:4-255) Re 98.5 2.2E-07 1.6E-11 93.5 11.8 192 170-375 11-229 (252)
45 d1jbka_ c.37.1.20 (A:) ClpB, A 98.5 6.6E-07 4.8E-11 83.3 13.6 150 171-341 23-193 (195)
46 d2ifga3 c.10.2.7 (A:36-191) Hi 98.4 2.4E-07 1.7E-11 85.0 8.7 85 578-669 27-113 (156)
47 d1a5ta2 c.37.1.20 (A:1-207) de 98.4 2.2E-06 1.6E-10 82.4 15.1 169 176-377 8-202 (207)
48 d2ifga3 c.10.2.7 (A:36-191) Hi 98.3 4.9E-07 3.6E-11 82.8 8.9 102 584-694 10-114 (156)
49 d1w5sa2 c.37.1.20 (A:7-293) CD 98.3 8.4E-06 6.1E-10 83.1 19.2 179 168-346 14-222 (287)
50 d1sxja2 c.37.1.20 (A:295-547) 98.3 2.7E-06 2E-10 85.2 13.7 194 170-377 14-225 (253)
51 d1ixsb2 c.37.1.20 (B:4-242) Ho 98.2 8.7E-06 6.3E-10 80.6 16.0 177 170-378 9-206 (239)
52 d1in4a2 c.37.1.20 (A:17-254) H 98.2 8.2E-06 5.9E-10 80.7 14.2 176 170-378 9-205 (238)
53 d1l8qa2 c.37.1.20 (A:77-289) C 98.2 1.5E-05 1.1E-09 76.7 15.5 132 197-347 36-179 (213)
54 d1qvra2 c.37.1.20 (A:149-535) 98.1 2.4E-05 1.8E-09 81.9 17.6 153 171-346 23-197 (387)
55 d1lv7a_ c.37.1.20 (A:) AAA dom 98.0 2.9E-05 2.1E-09 76.6 13.8 179 170-373 12-217 (256)
56 d1ixza_ c.37.1.20 (A:) AAA dom 98.0 2.9E-05 2.1E-09 76.4 13.5 178 170-373 9-214 (247)
57 d1e32a2 c.37.1.20 (A:201-458) 97.9 5.9E-05 4.3E-09 74.9 15.0 179 170-373 4-207 (258)
58 d1koha1 c.10.2.3 (A:201-362) m 97.8 3.6E-06 2.6E-10 77.5 3.7 88 574-665 57-152 (162)
59 d1d2na_ c.37.1.20 (A:) Hexamer 97.8 0.0001 7.4E-09 72.4 13.7 155 170-345 9-187 (246)
60 d1r7ra3 c.37.1.20 (A:471-735) 97.6 0.00017 1.2E-08 71.8 11.6 180 170-374 7-214 (265)
61 d1koha1 c.10.2.3 (A:201-362) m 97.4 2.2E-05 1.6E-09 72.0 1.8 83 609-692 62-155 (162)
62 d2gnoa2 c.37.1.20 (A:11-208) g 97.2 0.001 7.3E-08 62.5 12.0 120 196-334 14-139 (198)
63 d1qvra3 c.37.1.20 (A:536-850) 97.2 0.00037 2.7E-08 70.9 9.3 136 171-315 24-175 (315)
64 d1r6bx3 c.37.1.20 (X:437-751) 97.0 0.00057 4.1E-08 69.6 8.2 134 171-315 23-171 (315)
65 d1ny5a2 c.37.1.20 (A:138-384) 96.7 0.012 8.7E-07 57.0 14.7 45 171-219 1-45 (247)
66 d1pgva_ c.10.1.1 (A:) Tropomod 96.7 0.00088 6.4E-08 61.2 6.0 116 551-669 14-141 (167)
67 d2qy9a2 c.37.1.10 (A:285-495) 96.5 0.0062 4.5E-07 56.9 10.3 89 195-286 7-101 (211)
68 d1pgva_ c.10.1.1 (A:) Tropomod 96.3 0.00066 4.8E-08 62.1 2.5 97 572-669 5-110 (167)
69 d1ofha_ c.37.1.20 (A:) HslU {H 96.2 0.0011 8.3E-08 67.2 3.8 49 171-219 15-71 (309)
70 d1rz3a_ c.37.1.6 (A:) Hypothet 96.1 0.0042 3.1E-07 58.1 7.4 51 179-234 7-57 (198)
71 d1m8pa3 c.37.1.15 (A:391-573) 96.1 0.0018 1.3E-07 59.9 4.3 37 195-233 4-41 (183)
72 d1xp8a1 c.37.1.11 (A:15-282) R 96.1 0.0097 7.1E-07 58.1 9.7 85 195-286 55-145 (268)
73 d1lw7a2 c.37.1.1 (A:220-411) T 96.0 0.0014 1.1E-07 60.9 3.2 24 196-219 6-29 (192)
74 d1mo6a1 c.37.1.11 (A:1-269) Re 96.0 0.013 9.2E-07 57.2 10.0 86 194-286 57-148 (269)
75 d1gvnb_ c.37.1.21 (B:) Plasmid 95.9 0.0027 2E-07 63.2 5.2 42 177-219 13-54 (273)
76 d1np6a_ c.37.1.10 (A:) Molybdo 95.9 0.0025 1.8E-07 58.1 4.4 23 197-219 2-24 (170)
77 d1kaga_ c.37.1.2 (A:) Shikimat 95.9 0.0012 8.5E-08 60.1 2.0 22 198-219 3-24 (169)
78 d2i3ba1 c.37.1.11 (A:1-189) Ca 95.9 0.002 1.5E-07 59.7 3.7 23 198-220 2-24 (189)
79 d1ls1a2 c.37.1.10 (A:89-295) G 95.9 0.032 2.3E-06 51.9 12.1 88 196-287 9-103 (207)
80 d1ly1a_ c.37.1.1 (A:) Polynucl 95.9 0.0018 1.3E-07 58.0 3.1 22 198-219 3-24 (152)
81 d2bdta1 c.37.1.25 (A:1-176) Hy 95.9 0.0027 2E-07 58.1 4.4 22 198-219 3-24 (176)
82 d1x6va3 c.37.1.4 (A:34-228) Ad 95.8 0.0022 1.6E-07 60.1 3.7 36 196-233 18-53 (195)
83 d1u94a1 c.37.1.11 (A:6-268) Re 95.8 0.01 7.4E-07 57.9 8.6 84 196-286 53-142 (263)
84 d1j8yf2 c.37.1.10 (F:87-297) G 95.6 0.012 8.7E-07 55.0 7.9 59 195-255 10-69 (211)
85 d1qf9a_ c.37.1.1 (A:) UMP/CMP 95.6 0.0031 2.2E-07 59.1 3.8 25 195-219 4-28 (194)
86 d1okkd2 c.37.1.10 (D:97-303) G 95.5 0.013 9.7E-07 54.5 7.9 58 196-255 5-63 (207)
87 d1l2ta_ c.37.1.12 (A:) MJ0796 95.5 0.028 2E-06 53.1 10.0 59 263-321 150-211 (230)
88 d1vmaa2 c.37.1.10 (A:82-294) G 95.4 0.045 3.2E-06 51.0 11.0 89 195-286 9-103 (213)
89 d1sq5a_ c.37.1.6 (A:) Pantothe 95.3 0.019 1.4E-06 57.1 8.6 80 194-277 77-160 (308)
90 d1ukza_ c.37.1.1 (A:) Uridylat 95.3 0.0042 3.1E-07 58.2 3.6 26 194-219 5-30 (196)
91 d1tf7a2 c.37.1.11 (A:256-497) 95.3 0.011 8.3E-07 57.2 7.0 41 196-238 25-65 (242)
92 d1rkba_ c.37.1.1 (A:) Adenylat 95.3 0.0031 2.3E-07 57.6 2.6 21 199-219 6-26 (173)
93 d2onka1 c.37.1.12 (A:1-240) Mo 95.3 0.013 9.2E-07 55.8 6.7 121 199-322 26-193 (240)
94 d1knqa_ c.37.1.17 (A:) Glucona 95.2 0.0044 3.2E-07 56.4 3.4 25 195-219 4-28 (171)
95 d1w44a_ c.37.1.11 (A:) NTPase 95.2 0.022 1.6E-06 56.8 8.7 71 197-287 123-193 (321)
96 d1io0a_ c.10.1.1 (A:) Tropomod 95.2 0.0058 4.2E-07 55.4 4.1 64 578-643 42-110 (166)
97 d2iyva1 c.37.1.2 (A:2-166) Shi 95.2 0.0031 2.2E-07 57.3 2.1 20 200-219 4-23 (165)
98 d2awna2 c.37.1.12 (A:4-235) Ma 95.2 0.016 1.2E-06 54.9 7.1 22 198-219 27-48 (232)
99 d1xjca_ c.37.1.10 (A:) Molybdo 95.2 0.007 5.1E-07 54.8 4.4 22 198-219 2-23 (165)
100 d1viaa_ c.37.1.2 (A:) Shikimat 95.1 0.0039 2.8E-07 56.3 2.6 20 200-219 3-22 (161)
101 d1yj5a2 c.37.1.1 (A:351-522) 5 95.1 0.0049 3.5E-07 56.2 3.3 25 195-219 12-36 (172)
102 d1xpua3 c.37.1.11 (A:129-417) 95.1 0.013 9.1E-07 57.4 6.3 97 181-286 32-140 (289)
103 d2jdid3 c.37.1.11 (D:82-357) C 95.1 0.02 1.5E-06 55.5 7.7 100 181-286 57-178 (276)
104 d1bifa1 c.37.1.7 (A:37-249) 6- 95.1 0.0048 3.5E-07 58.6 3.2 24 197-220 2-25 (213)
105 d1zp6a1 c.37.1.25 (A:6-181) Hy 95.1 0.0054 3.9E-07 56.1 3.4 23 197-219 4-26 (176)
106 d2pmka1 c.37.1.12 (A:467-707) 95.1 0.035 2.6E-06 53.0 9.3 22 198-219 30-51 (241)
107 d1khta_ c.37.1.1 (A:) Adenylat 95.0 0.0071 5.2E-07 55.9 4.3 22 198-219 2-23 (190)
108 d1qhxa_ c.37.1.3 (A:) Chloramp 94.9 0.0047 3.4E-07 56.6 2.6 23 197-219 3-25 (178)
109 d1oxxk2 c.37.1.12 (K:1-242) Gl 94.8 0.028 2E-06 53.4 7.7 60 263-322 145-207 (242)
110 d1y63a_ c.37.1.1 (A:) Probable 94.8 0.0066 4.8E-07 55.4 3.2 24 196-219 4-27 (174)
111 d1nksa_ c.37.1.1 (A:) Adenylat 94.8 0.013 9.1E-07 54.4 5.2 27 198-226 2-28 (194)
112 d1io0a_ c.10.1.1 (A:) Tropomod 94.7 0.0063 4.6E-07 55.2 2.8 96 571-667 6-110 (166)
113 d1e6ca_ c.37.1.2 (A:) Shikimat 94.7 0.0048 3.5E-07 56.3 2.0 21 199-219 4-24 (170)
114 d1mv5a_ c.37.1.12 (A:) Multidr 94.7 0.053 3.8E-06 51.8 9.6 24 196-219 27-50 (242)
115 d1ye8a1 c.37.1.11 (A:1-178) Hy 94.5 0.0075 5.5E-07 55.3 2.7 21 200-220 3-23 (178)
116 d1jj7a_ c.37.1.12 (A:) Peptide 94.5 0.1 7.6E-06 50.0 11.1 23 197-219 40-62 (251)
117 d1m7ga_ c.37.1.4 (A:) Adenosin 94.4 0.018 1.3E-06 54.1 5.2 25 195-219 22-46 (208)
118 d1ak2a1 c.37.1.1 (A:14-146,A:1 94.3 0.01 7.4E-07 55.1 3.3 23 196-219 3-25 (190)
119 d1vpla_ c.37.1.12 (A:) Putativ 94.2 0.043 3.2E-06 52.3 7.7 59 264-322 139-199 (238)
120 d1ihua2 c.37.1.10 (A:308-586) 94.2 0.031 2.3E-06 55.3 6.9 52 178-237 7-58 (279)
121 d1teva_ c.37.1.1 (A:) UMP/CMP 94.2 0.011 7.7E-07 55.2 3.1 22 198-219 2-23 (194)
122 d2hyda1 c.37.1.12 (A:324-578) 94.1 0.03 2.2E-06 53.9 6.2 23 197-219 44-66 (255)
123 d1odfa_ c.37.1.6 (A:) Hypothet 94.0 0.089 6.5E-06 51.3 9.7 82 194-275 24-113 (286)
124 d1cp2a_ c.37.1.10 (A:) Nitroge 93.8 0.031 2.3E-06 54.9 5.9 37 198-236 2-38 (269)
125 d1uj2a_ c.37.1.6 (A:) Uridine- 93.7 0.015 1.1E-06 55.0 3.2 23 197-219 2-24 (213)
126 d1ckea_ c.37.1.1 (A:) CMP kina 93.6 0.013 9.6E-07 55.9 2.6 22 198-219 4-25 (225)
127 d1ihua1 c.37.1.10 (A:1-296) Ar 93.6 0.032 2.3E-06 55.7 5.7 45 196-242 7-51 (296)
128 d3adka_ c.37.1.1 (A:) Adenylat 93.5 0.016 1.2E-06 53.9 2.9 24 196-219 7-30 (194)
129 d1nn5a_ c.37.1.1 (A:) Thymidyl 93.4 0.14 9.9E-06 47.8 9.6 35 198-234 4-38 (209)
130 d1zina1 c.37.1.1 (A:1-125,A:16 93.3 0.016 1.1E-06 53.2 2.6 20 200-219 3-22 (182)
131 d1fx0a3 c.37.1.11 (A:97-372) C 93.3 0.062 4.5E-06 52.2 6.9 87 198-286 68-169 (276)
132 d1zaka1 c.37.1.1 (A:3-127,A:15 93.3 0.016 1.1E-06 53.7 2.5 21 199-219 5-25 (189)
133 d1w36d1 c.37.1.19 (D:2-360) Ex 93.1 0.073 5.3E-06 54.3 7.6 51 198-250 164-217 (359)
134 d2ak3a1 c.37.1.1 (A:0-124,A:16 93.0 0.023 1.7E-06 52.4 3.3 21 199-219 8-28 (189)
135 d1q3ta_ c.37.1.1 (A:) CMP kina 93.0 0.021 1.5E-06 54.4 2.9 43 199-254 5-47 (223)
136 d1szpa2 c.37.1.11 (A:145-395) 93.0 0.079 5.8E-06 50.9 7.4 48 196-243 33-84 (251)
137 d2cdna1 c.37.1.1 (A:1-181) Ade 92.9 0.02 1.4E-06 52.6 2.6 20 200-219 3-22 (181)
138 d1s3ga1 c.37.1.1 (A:1-125,A:16 92.9 0.021 1.6E-06 52.3 2.8 20 200-219 3-22 (182)
139 d2p67a1 c.37.1.10 (A:1-327) LA 92.9 0.056 4.1E-06 54.3 6.2 63 179-247 40-104 (327)
140 d1g8pa_ c.37.1.20 (A:) ATPase 92.9 0.02 1.5E-06 58.5 2.8 45 168-218 5-49 (333)
141 d2qm8a1 c.37.1.10 (A:5-327) Me 92.9 0.05 3.6E-06 54.6 5.7 39 178-220 36-74 (323)
142 d2afhe1 c.37.1.10 (E:1-289) Ni 92.8 0.05 3.6E-06 54.1 5.7 38 198-237 3-40 (289)
143 d1lvga_ c.37.1.1 (A:) Guanylat 92.7 0.018 1.3E-06 53.3 2.0 21 199-219 2-22 (190)
144 d1znwa1 c.37.1.1 (A:20-201) Gu 92.7 0.023 1.7E-06 52.1 2.7 22 198-219 3-24 (182)
145 d1uf9a_ c.37.1.1 (A:) Dephosph 92.7 0.031 2.3E-06 51.7 3.6 22 196-217 2-23 (191)
146 d1a7ja_ c.37.1.6 (A:) Phosphor 92.6 0.033 2.4E-06 54.4 3.8 80 196-277 3-91 (288)
147 d1hyqa_ c.37.1.10 (A:) Cell di 92.4 0.054 3.9E-06 51.7 5.1 37 198-236 2-39 (232)
148 d1gkya_ c.37.1.1 (A:) Guanylat 92.4 0.022 1.6E-06 52.4 2.1 21 199-219 3-23 (186)
149 d1akya1 c.37.1.1 (A:3-130,A:16 92.3 0.026 1.9E-06 51.6 2.6 22 197-219 3-24 (180)
150 d2vp4a1 c.37.1.1 (A:12-208) De 92.2 0.033 2.4E-06 51.7 3.1 26 194-219 6-31 (197)
151 d1e4va1 c.37.1.1 (A:1-121,A:15 92.1 0.031 2.3E-06 51.0 2.7 20 200-219 3-22 (179)
152 d2jdia3 c.37.1.11 (A:95-379) C 91.7 0.36 2.7E-05 46.7 10.2 101 181-286 57-178 (285)
153 d1kgda_ c.37.1.1 (A:) Guanylat 91.7 0.036 2.7E-06 50.4 2.6 22 198-219 4-25 (178)
154 d1cr2a_ c.37.1.11 (A:) Gene 4 91.3 0.4 2.9E-05 46.7 10.5 54 198-254 36-89 (277)
155 d2i1qa2 c.37.1.11 (A:65-322) D 91.3 0.27 2E-05 46.9 9.1 56 196-252 33-102 (258)
156 d3dhwc1 c.37.1.12 (C:1-240) Me 91.1 0.052 3.8E-06 51.5 3.1 22 198-219 32-53 (240)
157 d1yrba1 c.37.1.10 (A:1-244) AT 91.0 0.048 3.5E-06 52.5 2.9 21 199-219 2-22 (244)
158 d1sgwa_ c.37.1.12 (A:) Putativ 91.0 0.043 3.1E-06 50.9 2.4 22 198-219 28-49 (200)
159 d1a1va1 c.37.1.14 (A:190-325) 90.9 0.26 1.9E-05 42.0 7.6 52 195-252 6-57 (136)
160 d1g2912 c.37.1.12 (1:1-240) Ma 90.9 0.053 3.9E-06 51.5 3.0 22 198-219 30-51 (240)
161 d1tf7a1 c.37.1.11 (A:14-255) C 90.9 0.15 1.1E-05 48.5 6.5 41 196-237 25-65 (242)
162 d3b60a1 c.37.1.12 (A:329-581) 90.6 0.059 4.3E-06 51.9 3.1 22 198-219 42-63 (253)
163 d1svma_ c.37.1.20 (A:) Papillo 90.6 0.076 5.5E-06 54.1 4.1 25 195-219 152-176 (362)
164 d1b0ua_ c.37.1.12 (A:) ATP-bin 90.5 0.058 4.2E-06 52.0 2.9 23 197-219 28-50 (258)
165 d1pzna2 c.37.1.11 (A:96-349) D 90.5 0.17 1.2E-05 48.6 6.6 50 195-244 34-87 (254)
166 d4tmka_ c.37.1.1 (A:) Thymidyl 90.4 0.5 3.6E-05 43.7 9.7 35 198-234 3-38 (210)
167 d1r8sa_ c.37.1.8 (A:) ADP-ribo 90.4 0.057 4.1E-06 47.8 2.6 21 200-220 3-23 (160)
168 d1s96a_ c.37.1.1 (A:) Guanylat 90.2 0.058 4.2E-06 50.2 2.6 22 198-219 3-24 (205)
169 d2ocpa1 c.37.1.1 (A:37-277) De 90.2 0.071 5.2E-06 51.2 3.4 24 196-219 1-24 (241)
170 d1v43a3 c.37.1.12 (A:7-245) Hy 90.2 0.067 4.9E-06 50.6 3.0 22 198-219 33-54 (239)
171 d1nlfa_ c.37.1.11 (A:) Hexamer 90.1 0.44 3.2E-05 46.3 9.4 22 198-219 30-51 (274)
172 d1svia_ c.37.1.8 (A:) Probable 89.9 0.083 6E-06 48.7 3.4 26 195-220 21-46 (195)
173 d3d31a2 c.37.1.12 (A:1-229) Su 89.8 0.067 4.9E-06 50.3 2.6 22 198-219 27-48 (229)
174 d1r0wa_ c.37.1.12 (A:) Cystic 89.7 0.078 5.7E-06 51.9 3.1 23 197-219 62-84 (281)
175 d1p5zb_ c.37.1.1 (B:) Deoxycyt 89.6 0.06 4.4E-06 51.7 2.3 23 197-219 2-24 (241)
176 d1upta_ c.37.1.8 (A:) ADP-ribo 89.6 0.07 5.1E-06 47.6 2.5 21 200-220 8-28 (169)
177 d1g3qa_ c.37.1.10 (A:) Cell di 89.5 0.15 1.1E-05 48.6 5.0 37 198-236 3-40 (237)
178 d1z06a1 c.37.1.8 (A:32-196) Ra 89.2 0.078 5.7E-06 47.4 2.5 22 199-220 4-25 (165)
179 d2a5ja1 c.37.1.8 (A:9-181) Rab 89.0 0.08 5.8E-06 47.8 2.5 22 199-220 5-26 (173)
180 d1gsia_ c.37.1.1 (A:) Thymidyl 89.0 0.16 1.2E-05 47.1 4.9 21 199-219 2-22 (208)
181 d1um8a_ c.37.1.20 (A:) ClpX {H 88.9 0.12 8.5E-06 52.8 3.9 24 196-219 67-90 (364)
182 d1z0fa1 c.37.1.8 (A:8-173) Rab 88.8 0.085 6.2E-06 47.2 2.5 22 199-220 6-27 (166)
183 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 88.8 0.16 1.1E-05 46.0 4.5 25 196-220 12-36 (186)
184 d1ji0a_ c.37.1.12 (A:) Branche 88.8 0.096 7E-06 49.9 3.0 22 198-219 33-54 (240)
185 d1ksha_ c.37.1.8 (A:) ADP-ribo 88.7 0.093 6.8E-06 46.8 2.7 21 200-220 5-25 (165)
186 d1z2aa1 c.37.1.8 (A:8-171) Rab 88.7 0.089 6.5E-06 46.9 2.6 20 200-219 5-24 (164)
187 d1vhta_ c.37.1.1 (A:) Dephosph 88.7 0.096 7E-06 48.9 2.9 20 198-217 4-23 (208)
188 d2erxa1 c.37.1.8 (A:6-176) di- 88.7 0.095 6.9E-06 47.1 2.8 21 200-220 5-25 (171)
189 d1g41a_ c.37.1.20 (A:) HslU {H 88.6 0.15 1.1E-05 53.4 4.6 49 171-219 15-71 (443)
190 d1zj6a1 c.37.1.8 (A:2-178) ADP 88.5 0.22 1.6E-05 44.7 5.2 23 198-220 16-38 (177)
191 d1yzqa1 c.37.1.8 (A:14-177) Ra 88.4 0.099 7.2E-06 46.6 2.7 21 200-220 3-23 (164)
192 d1g6ha_ c.37.1.12 (A:) MJ1267 88.4 0.1 7.6E-06 50.1 3.0 22 198-219 31-52 (254)
193 d1mkya1 c.37.1.8 (A:2-172) Pro 88.4 0.11 8.1E-06 46.6 3.0 22 199-220 2-23 (171)
194 d1v5wa_ c.37.1.11 (A:) Meiotic 88.3 0.27 2E-05 47.1 6.2 49 195-243 35-87 (258)
195 d2ew1a1 c.37.1.8 (A:4-174) Rab 88.3 0.1 7.5E-06 46.9 2.7 22 199-220 7-28 (171)
196 d1fzqa_ c.37.1.8 (A:) ADP-ribo 88.1 0.18 1.3E-05 45.3 4.4 23 198-220 17-39 (176)
197 d1z08a1 c.37.1.8 (A:17-183) Ra 87.9 0.11 7.7E-06 46.6 2.5 22 199-220 5-26 (167)
198 d3raba_ c.37.1.8 (A:) Rab3a {R 87.9 0.11 7.8E-06 46.6 2.5 22 199-220 7-28 (169)
199 d1jjva_ c.37.1.1 (A:) Dephosph 87.9 0.12 8.5E-06 48.2 2.9 20 198-217 3-22 (205)
200 d2gjsa1 c.37.1.8 (A:91-258) Ra 87.9 0.12 8.5E-06 46.3 2.8 22 199-220 3-24 (168)
201 d1z0ja1 c.37.1.8 (A:2-168) Rab 87.9 0.11 7.8E-06 46.5 2.5 21 200-220 7-27 (167)
202 d2fn4a1 c.37.1.8 (A:24-196) r- 87.8 0.11 8.3E-06 46.7 2.7 24 197-220 6-29 (173)
203 d1kaoa_ c.37.1.8 (A:) Rap2a {H 87.7 0.11 8.1E-06 46.4 2.5 22 199-220 5-26 (167)
204 d2f7sa1 c.37.1.8 (A:5-190) Rab 87.7 0.12 8.5E-06 47.2 2.7 22 199-220 7-28 (186)
205 d1r2qa_ c.37.1.8 (A:) Rab5a {H 87.7 0.11 8.1E-06 46.6 2.5 22 199-220 8-29 (170)
206 d1g16a_ c.37.1.8 (A:) Rab-rela 87.7 0.12 8.5E-06 46.2 2.7 22 199-220 4-25 (166)
207 d1egaa1 c.37.1.8 (A:4-182) GTP 87.5 0.15 1.1E-05 46.0 3.4 24 196-219 4-27 (179)
208 d1wf3a1 c.37.1.8 (A:3-180) GTP 87.5 0.16 1.2E-05 45.8 3.6 25 196-220 4-28 (178)
209 d1htwa_ c.37.1.18 (A:) Hypothe 87.5 0.21 1.5E-05 43.5 4.1 25 196-220 32-56 (158)
210 d1n0wa_ c.37.1.11 (A:) DNA rep 87.4 0.32 2.4E-05 45.4 6.0 47 196-242 22-72 (242)
211 d2erya1 c.37.1.8 (A:10-180) r- 87.3 0.13 9.2E-06 46.2 2.7 22 199-220 7-28 (171)
212 d2atva1 c.37.1.8 (A:5-172) Ras 87.3 0.12 8.8E-06 46.2 2.5 21 200-220 5-25 (168)
213 d1nija1 c.37.1.10 (A:2-223) Hy 87.2 0.14 1E-05 48.2 3.1 24 196-219 2-25 (222)
214 d1ky3a_ c.37.1.8 (A:) Rab-rela 87.1 0.13 9.1E-06 46.4 2.5 22 199-220 4-25 (175)
215 d1udxa2 c.37.1.8 (A:157-336) O 87.1 0.1 7.6E-06 47.3 2.0 20 200-219 4-23 (180)
216 d2bmea1 c.37.1.8 (A:6-179) Rab 87.0 0.13 9.8E-06 46.2 2.7 22 199-220 7-28 (174)
217 d2f9la1 c.37.1.8 (A:8-182) Rab 86.9 0.13 9.4E-06 46.4 2.5 22 199-220 6-27 (175)
218 d1ctqa_ c.37.1.8 (A:) cH-p21 R 86.9 0.14 1E-05 45.7 2.7 21 200-220 6-26 (166)
219 d1xtqa1 c.37.1.8 (A:3-169) GTP 86.8 0.18 1.3E-05 45.0 3.4 22 198-219 5-26 (167)
220 d1c1ya_ c.37.1.8 (A:) Rap1A {H 86.5 0.14 1E-05 45.7 2.5 21 200-220 6-26 (167)
221 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 86.4 0.15 1.1E-05 46.0 2.7 22 199-220 4-25 (177)
222 d1l7vc_ c.37.1.12 (C:) ABC tra 86.4 0.12 8.9E-06 48.9 2.1 22 198-219 26-47 (231)
223 d2cxxa1 c.37.1.8 (A:2-185) GTP 86.3 0.17 1.2E-05 45.9 3.0 22 199-220 2-23 (184)
224 d2bcgy1 c.37.1.8 (Y:3-196) GTP 86.3 0.15 1.1E-05 46.8 2.7 22 199-220 8-29 (194)
225 d2atxa1 c.37.1.8 (A:9-193) Rho 86.2 0.16 1.2E-05 46.3 2.7 23 198-220 10-32 (185)
226 d1e0sa_ c.37.1.8 (A:) ADP-ribo 86.1 0.16 1.1E-05 45.7 2.6 25 195-220 11-35 (173)
227 d2qtvb1 c.37.1.8 (B:24-189) SA 86.1 0.16 1.1E-05 44.9 2.6 21 199-219 2-22 (166)
228 d1lnza2 c.37.1.8 (A:158-342) O 85.9 0.13 9.8E-06 46.7 2.1 21 199-219 3-23 (185)
229 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 85.9 0.16 1.2E-05 45.5 2.5 21 200-220 6-26 (170)
230 d1svsa1 c.37.1.8 (A:32-60,A:18 85.9 0.17 1.2E-05 46.3 2.8 21 199-219 4-24 (195)
231 d1i2ma_ c.37.1.8 (A:) Ran {Hum 85.9 0.13 9.8E-06 46.0 2.0 21 200-220 6-26 (170)
232 d2g3ya1 c.37.1.8 (A:73-244) GT 85.8 0.18 1.3E-05 45.3 2.8 21 199-219 5-25 (172)
233 d2fh5b1 c.37.1.8 (B:63-269) Si 85.4 0.17 1.3E-05 47.0 2.6 23 198-220 1-23 (207)
234 d1zcba2 c.37.1.8 (A:47-75,A:20 85.4 0.18 1.3E-05 46.5 2.7 19 199-217 4-22 (200)
235 d2g6ba1 c.37.1.8 (A:58-227) Ra 85.2 0.18 1.3E-05 45.1 2.6 22 199-220 8-29 (170)
236 d1moza_ c.37.1.8 (A:) ADP-ribo 85.2 0.17 1.3E-05 45.8 2.5 24 196-220 17-40 (182)
237 d1zd9a1 c.37.1.8 (A:18-181) AD 85.1 0.18 1.3E-05 44.7 2.5 21 200-220 5-25 (164)
238 d1nrjb_ c.37.1.8 (B:) Signal r 85.1 0.18 1.3E-05 46.8 2.6 22 199-220 5-26 (209)
239 d1mh1a_ c.37.1.8 (A:) Rac {Hum 85.0 0.24 1.7E-05 44.9 3.3 23 198-220 6-28 (183)
240 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 84.9 0.19 1.4E-05 45.7 2.6 20 200-219 5-24 (184)
241 d1x3sa1 c.37.1.8 (A:2-178) Rab 84.9 0.19 1.4E-05 45.3 2.5 21 200-220 10-30 (177)
242 d1tmka_ c.37.1.1 (A:) Thymidyl 84.8 0.22 1.6E-05 46.5 3.1 23 197-219 3-25 (214)
243 d1deka_ c.37.1.1 (A:) Deoxynuc 84.7 0.22 1.6E-05 47.6 3.0 22 198-219 2-23 (241)
244 d1m7ba_ c.37.1.8 (A:) RhoE (RN 84.7 0.21 1.5E-05 45.1 2.7 21 200-220 5-25 (179)
245 d1x1ra1 c.37.1.8 (A:10-178) Ra 84.5 0.2 1.5E-05 44.7 2.5 22 199-220 6-27 (169)
246 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 84.3 0.22 1.6E-05 45.7 2.8 20 200-219 5-24 (200)
247 d2gj8a1 c.37.1.8 (A:216-376) P 84.3 0.24 1.8E-05 43.6 3.0 20 200-219 4-23 (161)
248 d1u8za_ c.37.1.8 (A:) Ras-rela 83.9 0.28 2E-05 43.7 3.3 24 197-220 4-27 (168)
249 d1wmsa_ c.37.1.8 (A:) Rab9a {H 83.8 0.25 1.8E-05 44.3 2.8 24 197-220 6-29 (174)
250 d1puia_ c.37.1.8 (A:) Probable 83.8 0.21 1.5E-05 45.2 2.4 25 196-220 15-39 (188)
251 d1u0la2 c.37.1.8 (A:69-293) Pr 83.7 0.37 2.7E-05 44.7 4.0 34 178-220 85-118 (225)
252 d2ngra_ c.37.1.8 (A:) CDC42 {H 83.6 0.24 1.8E-05 45.2 2.7 21 200-220 6-26 (191)
253 d1byia_ c.37.1.10 (A:) Dethiob 83.6 0.48 3.5E-05 44.1 5.0 22 198-219 2-24 (224)
254 d2bmja1 c.37.1.8 (A:66-240) Ce 83.5 0.24 1.8E-05 44.5 2.6 23 198-220 6-28 (175)
255 d1mkya2 c.37.1.8 (A:173-358) P 83.0 0.27 2E-05 44.5 2.8 24 196-220 8-31 (186)
256 d1azta2 c.37.1.8 (A:35-65,A:20 82.2 0.29 2.1E-05 45.9 2.7 22 198-219 7-28 (221)
257 d2fu5c1 c.37.1.8 (C:3-175) Rab 82.0 0.2 1.5E-05 44.9 1.4 22 199-220 8-29 (173)
258 d1knxa2 c.91.1.2 (A:133-309) H 81.3 0.38 2.8E-05 42.7 3.0 22 198-219 16-37 (177)
259 d1kkma_ c.91.1.2 (A:) HPr kina 81.3 0.34 2.5E-05 43.1 2.6 22 198-219 15-36 (176)
260 d2bv3a2 c.37.1.8 (A:7-282) Elo 81.3 0.39 2.8E-05 46.4 3.2 25 195-219 4-28 (276)
261 d1h65a_ c.37.1.8 (A:) Chloropl 80.5 0.77 5.6E-05 43.9 5.2 40 177-220 16-55 (257)
262 d1ko7a2 c.91.1.2 (A:130-298) H 79.9 0.42 3.1E-05 42.2 2.7 22 198-219 16-37 (169)
263 d1xzpa2 c.37.1.8 (A:212-371) T 79.0 0.19 1.4E-05 44.3 0.0 20 200-219 3-22 (160)
264 d1wb9a2 c.37.1.12 (A:567-800) 79.0 4.4 0.00032 37.6 10.0 25 196-220 40-64 (234)
265 d2dy1a2 c.37.1.8 (A:8-274) Elo 78.1 0.6 4.4E-05 44.8 3.4 22 197-218 2-23 (267)
266 d1p6xa_ c.37.1.1 (A:) Thymidin 77.9 0.81 5.9E-05 45.4 4.5 25 196-220 5-29 (333)
267 g1f2t.1 c.37.1.12 (A:,B:) Rad5 75.0 0.75 5.4E-05 44.8 3.3 21 198-218 24-44 (292)
268 d1g6oa_ c.37.1.11 (A:) Hexamer 74.9 0.71 5.2E-05 45.8 3.1 21 199-219 168-188 (323)
269 d1e2ka_ c.37.1.1 (A:) Thymidin 74.0 0.72 5.2E-05 45.6 2.8 24 196-219 3-26 (329)
270 d1tuea_ c.37.1.20 (A:) Replica 73.9 1 7.3E-05 40.6 3.5 36 179-219 40-75 (205)
271 d1f5na2 c.37.1.8 (A:7-283) Int 73.9 1.5 0.00011 42.2 5.1 25 195-219 30-54 (277)
272 d1uaaa1 c.37.1.19 (A:2-307) DE 73.7 1.3 9.3E-05 43.4 4.8 20 200-219 17-37 (306)
273 d1ewqa2 c.37.1.12 (A:542-765) 73.5 9.8 0.00072 34.8 10.7 105 199-321 37-162 (224)
274 d1t9ha2 c.37.1.8 (A:68-298) Pr 73.3 0.46 3.3E-05 44.3 1.0 22 199-220 99-120 (231)
275 d2fz4a1 c.37.1.19 (A:24-229) D 73.1 12 0.0009 33.5 11.4 108 172-299 69-192 (206)
276 d1wb1a4 c.37.1.8 (A:1-179) Elo 72.0 0.95 6.9E-05 40.4 3.0 21 199-219 7-27 (179)
277 d1g7sa4 c.37.1.8 (A:1-227) Ini 70.2 0.99 7.2E-05 42.2 2.7 22 198-219 6-27 (227)
278 d1pjra1 c.37.1.19 (A:1-318) DE 68.4 2.5 0.00018 41.6 5.5 16 200-215 27-42 (318)
279 d1u0ja_ c.37.1.20 (A:) Rep 40 68.4 2 0.00014 41.0 4.5 25 195-219 102-126 (267)
280 d1osna_ c.37.1.1 (A:) Thymidin 67.4 1.1 7.9E-05 44.4 2.4 23 197-219 5-27 (331)
281 d1jala1 c.37.1.8 (A:1-278) Ych 66.3 1.1 8.3E-05 43.3 2.3 22 199-220 4-25 (278)
282 d1p9ra_ c.37.1.11 (A:) Extrace 66.3 2.3 0.00017 43.5 4.8 40 173-219 140-180 (401)
283 d1n0ua2 c.37.1.8 (A:3-343) Elo 64.3 1.9 0.00014 42.7 3.6 25 195-219 15-39 (341)
284 g1ii8.1 c.37.1.12 (A:,B:) Rad5 63.8 1.7 0.00012 43.3 3.2 21 198-218 24-44 (369)
285 d1qhla_ c.37.1.12 (A:) Cell di 62.0 0.77 5.6E-05 41.9 0.0 21 199-219 26-46 (222)
286 d2c78a3 c.37.1.8 (A:9-212) Elo 61.5 1.9 0.00014 39.4 2.7 21 199-219 5-25 (204)
287 d2eyqa3 c.37.1.19 (A:546-778) 61.5 26 0.0019 31.9 10.9 39 175-219 60-98 (233)
288 d1wxqa1 c.37.1.8 (A:1-319) GTP 61.1 1.9 0.00014 42.5 3.0 29 200-228 3-31 (319)
289 d1ni3a1 c.37.1.8 (A:11-306) Yc 60.7 1.9 0.00014 41.9 2.8 22 199-220 12-33 (296)
290 g1xew.1 c.37.1.12 (X:,Y:) Smc 60.3 1.7 0.00012 43.1 2.3 21 198-218 27-47 (329)
291 d1puja_ c.37.1.8 (A:) Probable 59.3 4.7 0.00034 38.5 5.4 24 196-219 111-134 (273)
292 d1g5ta_ c.37.1.11 (A:) ATP:cor 58.6 14 0.0011 31.3 7.8 114 200-316 5-137 (157)
293 d1tq4a_ c.37.1.8 (A:) Interfer 57.5 2.4 0.00017 43.3 2.9 22 198-219 57-78 (400)
294 d1p3da1 c.5.1.1 (A:11-106) UDP 47.3 5.2 0.00038 31.0 2.7 25 195-219 6-30 (96)
295 d2p6ra3 c.37.1.19 (A:1-202) He 47.2 9.6 0.0007 34.1 5.2 18 200-217 43-60 (202)
296 d2olra1 c.91.1.1 (A:228-540) P 47.0 4.3 0.00032 39.0 2.6 18 198-215 15-32 (313)
297 d1e69a_ c.37.1.12 (A:) Smc hea 45.5 3.5 0.00025 40.1 1.8 20 198-217 25-44 (308)
298 d1j3ba1 c.91.1.1 (A:212-529) P 45.3 4.7 0.00035 38.9 2.6 18 198-215 15-32 (318)
299 d1d2ea3 c.37.1.8 (A:55-250) El 45.1 5 0.00036 36.0 2.6 21 199-219 5-25 (196)
300 d1zunb3 c.37.1.8 (B:16-237) Su 44.1 7.4 0.00054 35.6 3.8 25 195-219 7-31 (222)
301 d1g8fa3 c.37.1.15 (A:390-511) 43.7 5.4 0.00039 32.3 2.3 23 197-219 6-28 (122)
302 d1ii2a1 c.91.1.1 (A:201-523) P 42.8 5.5 0.0004 38.4 2.7 17 198-214 15-31 (323)
303 d1e9ra_ c.37.1.11 (A:) Bacteri 42.2 9 0.00066 39.1 4.6 22 198-219 51-72 (433)
304 d1yksa1 c.37.1.14 (A:185-324) 42.0 6.2 0.00045 32.5 2.7 20 198-217 8-27 (140)
305 d1kk1a3 c.37.1.8 (A:6-200) Ini 40.2 6.5 0.00048 35.1 2.7 20 199-218 7-26 (195)
306 d1jnya3 c.37.1.8 (A:4-227) Elo 40.1 6.8 0.0005 35.9 2.8 21 199-219 5-25 (224)
307 d1gm5a3 c.37.1.19 (A:286-549) 40.1 12 0.00088 35.1 4.6 49 176-231 89-137 (264)
308 d1w1wa_ c.37.1.12 (A:) Smc hea 39.5 6.7 0.00049 39.9 3.0 21 198-218 26-46 (427)
309 d1hv8a1 c.37.1.19 (A:3-210) Pu 39.0 67 0.0049 28.2 9.8 19 200-218 45-63 (208)
310 d2qn6a3 c.37.1.8 (A:2-206) Ini 36.6 8 0.00058 34.8 2.7 21 199-219 10-30 (205)
311 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 35.8 14 0.001 39.5 5.2 36 200-236 27-65 (623)
312 d1wp9a1 c.37.1.19 (A:1-200) pu 35.2 21 0.0015 31.3 5.5 20 200-219 26-45 (200)
313 d2akab1 c.37.1.8 (B:6-304) Dyn 33.4 21 0.0015 33.9 5.5 25 196-220 25-49 (299)
314 d1f60a3 c.37.1.8 (A:2-240) Elo 31.0 12 0.00087 34.6 2.9 22 198-219 7-28 (239)
315 d1j6ua1 c.5.1.1 (A:0-88) UDP-N 30.0 11 0.0008 28.6 2.0 20 200-219 4-23 (89)
316 d1r5ba3 c.37.1.8 (A:215-459) E 29.9 11 0.00077 35.1 2.3 21 199-219 26-46 (245)
317 d1c9ka_ c.37.1.11 (A:) Adenosy 29.7 23 0.0017 30.8 4.4 37 199-241 1-37 (180)
318 d1gkub1 c.37.1.16 (B:1-250) He 24.8 33 0.0024 31.1 4.9 19 200-218 61-79 (237)
319 d1w36b1 c.37.1.19 (B:1-485) Ex 23.4 13 0.00097 38.2 1.9 23 197-219 16-39 (485)
320 d1lkxa_ c.37.1.9 (A:) Myosin S 22.2 22 0.0016 38.5 3.3 25 196-220 85-109 (684)
321 d1t5la1 c.37.1.19 (A:2-414) Nu 22.1 36 0.0026 34.0 4.8 35 178-219 19-53 (413)
322 d1r0ka2 c.2.1.3 (A:3-126,A:265 21.9 56 0.004 27.2 5.2 33 197-233 2-35 (150)
323 d1jwyb_ c.37.1.8 (B:) Dynamin 21.6 40 0.0029 31.9 5.0 25 196-220 23-47 (306)
324 d1d0xa2 c.37.1.9 (A:2-33,A:80- 21.4 23 0.0017 38.5 3.3 25 196-220 124-148 (712)
325 d1jaya_ c.2.1.6 (A:) Coenzyme 20.6 37 0.0027 29.3 4.2 44 200-251 3-47 (212)
326 d1ny5a1 c.23.1.1 (A:1-137) Tra 20.1 1.1E+02 0.0081 24.4 7.0 105 235-344 6-114 (137)
327 d2jfga1 c.5.1.1 (A:1-93) UDP-N 20.0 17 0.0012 27.5 1.3 20 199-219 7-26 (93)
No 1
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=100.00 E-value=9.6e-40 Score=340.59 Aligned_cols=247 Identities=18% Similarity=0.148 Sum_probs=193.7
Q ss_pred cCCceecchhhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHH--HHhcCCeEEEEEeCCCccHHHHH
Q 002362 168 DEEEICGRVDEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEE--VKRKFDKILWVCVSETFEEFRVA 245 (930)
Q Consensus 168 ~~~~~vGr~~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~--~~~~F~~~~wv~vs~~~~~~~~~ 245 (930)
.++.++||+.++++|+++|.... +.+.++|+|+||||+||||||+++|++.. .+.+|++++||++++.++...+.
T Consensus 18 ~~~~~~gR~~~~~~i~~~L~~~~---~~~~~~v~I~GmgGiGKTtLA~~v~~~~~~~~~~~f~~~~Wv~vs~~~~~~~l~ 94 (277)
T d2a5yb3 18 KQMTCYIREYHVDRVIKKLDEMC---DLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAPKSTFD 94 (277)
T ss_dssp CCCCSCCCHHHHHHHHHHHHHHT---TSSSEEEEEECSTTSSHHHHHHHHHHHCSSTBTTTBSEEEEEECCCCSTTHHHH
T ss_pred CCCceeCcHHHHHHHHHHHHhcc---CCCceEEEEECCCCCCHHHHHHHHHHhhhhhhhhcCceEEEEEecCCCCHHHHH
Confidence 45668999999999999997643 23678999999999999999999998633 67789999999999999888877
Q ss_pred HHHHHHhc---CCC-------CCCccHHHHHHHHHHHhcCceEEEEEeCccccCccChhhhhhhhccCCCCcEEEEEcCC
Q 002362 246 KAIVEALD---GHE-------SRLGEFQSLIKHIYESVAGMCFLLVLDDVWDGNYMKWEPFFHCLKNGLHRSKILVTTRK 315 (930)
Q Consensus 246 ~~i~~~l~---~~~-------~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~iivTtr~ 315 (930)
..+...+. ... ....+.......+.+.+.++|+|+||||||+.. .|..+. ..|||||||||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~kr~LlVLDDv~~~~--~~~~~~------~~~srilvTTR~ 166 (277)
T d2a5yb3 95 LFTDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQEE--TIRWAQ------ELRLRCLVTTRD 166 (277)
T ss_dssp HHHHHHHHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCHH--HHHHHH------HTTCEEEEEESB
T ss_pred HHHHHHHHHhcchhhcCCccchhhhhHHHHHHHHHHHhccCCeeEecchhhHHh--hhhhhc------ccCceEEEEeeh
Confidence 76655442 211 112233344556778889999999999999853 333221 247999999999
Q ss_pred hHHHhhhCC-cceEeCCCCChHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHHHcCCchhHHHHHHhhhcCCCCHHHHHH
Q 002362 316 KSVASMMGS-TNIISIKELTEEECRLLFNKIAFSDRPIEEREKLEQIGRKIANKCKGLPLAAKIIGSLMRSKETEEEWRR 394 (930)
Q Consensus 316 ~~v~~~~~~-~~~~~l~~L~~~~~~~lf~~~~~~~~~~~~~~~l~~~~~~i~~~c~glPLai~~~~~~l~~~~~~~~w~~ 394 (930)
+.++..+.. .+.|++++|+.+|||+||.+++|.... .+..++++++|+++|+|+|||++++|+.|+.+ +.+.|.+
T Consensus 167 ~~v~~~~~~~~~~~~l~~L~~~ea~~Lf~~~~~~~~~---~~~~~~~~~~iv~~c~GlPLAl~~ig~~l~~k-~~~~~~~ 242 (277)
T d2a5yb3 167 VEISNAASQTCEFIEVTSLEIDECYDFLEAYGMPMPV---GEKEEDVLNKTIELSSGNPATLMMFFKSCEPK-TFEKMAQ 242 (277)
T ss_dssp GGGGGGCCSCEEEEECCCCCHHHHHHHHHHTSCCCC-----CHHHHHHHHHHHHHTTCHHHHHHHHTTCCSS-SHHHHHH
T ss_pred HHHHHhcCCCCceEECCCCCHHHHHHHHHHHhCCccC---chhhHHHHHHHHHHhCCCHHHHHHHHHHhccC-CHHHHHH
Confidence 999987655 468999999999999999999886543 23457789999999999999999999999866 6778877
Q ss_pred HHhcccccchhhhhhHHHHHHHhhhcCChhHHHHHhHh
Q 002362 395 ILNSGLWKVEEIEKDILSSLLLSYNDLPSKVKKCFSYC 432 (930)
Q Consensus 395 ~l~~~~~~~~~~~~~i~~~l~lsy~~L~~~~k~cf~~~ 432 (930)
..+... ......+.+++.+||++||+++|.||-++
T Consensus 243 ~~~~L~---~~~~~~v~~il~~sY~~L~~~lk~c~~~l 277 (277)
T d2a5yb3 243 LNNKLE---SRGLVGVECITPYSYKSLAMALQRCVEVL 277 (277)
T ss_dssp HHHHHH---HHCSSTTCCCSSSSSSSHHHHHHHHHHTS
T ss_pred HHHHHh---cCcHHHHHHHHHHHHhcccHHHHHHHHhC
Confidence 665321 11235588899999999999999999763
No 2
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.78 E-value=6e-20 Score=195.72 Aligned_cols=251 Identities=20% Similarity=0.216 Sum_probs=184.6
Q ss_pred CCccEEEEccccccccchhhhHHHHHhhcCCcceEEEcCCcccccCCCCCcccCcccccCCCCCeeeccCCccccc-ccc
Q 002362 552 KRMRSLIIDYSRYFHLYLNGKILERLFRESTSLRVLEFGDWARSLQLGPLTRIPRNIERLVHLRYLNLSNQSIRKL-PDT 630 (930)
Q Consensus 552 ~~Lr~L~l~~~~~~~~~~~~~~~~~~~~~~~~Lr~L~L~~~~~~~~~~~~~~lp~~i~~L~~Lr~L~L~~~~i~~l-p~~ 630 (930)
.+++.|++.++...... .++..+.++++|++|+|++|.. -...+|..|++|++|++|+|++|.+..+ |..
T Consensus 50 ~~v~~L~L~~~~l~g~~----~lp~~l~~L~~L~~L~Ls~~N~-----l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~ 120 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPY----PIPSSLANLPYLNFLYIGGINN-----LVGPIPPAIAKLTQLHYLYITHTNVSGAIPDF 120 (313)
T ss_dssp CCEEEEEEECCCCSSCE----ECCGGGGGCTTCSEEEEEEETT-----EESCCCGGGGGCTTCSEEEEEEECCEEECCGG
T ss_pred EEEEEEECCCCCCCCCC----CCChHHhcCccccccccccccc-----cccccccccccccccchhhhcccccccccccc
Confidence 35777788776532110 1233478899999999985321 1236899999999999999999998865 455
Q ss_pred cccCCcccEEeccCCCCCccccccccccCCcceEeecCcccccccCCcCCCCCCC-CcCCceEeCCCCCcCCCccccccc
Q 002362 631 LCELYNLQKLDISCCCKLKELPQGIGKLINMRHLLNYGTISLRYMPVGIGRLTSL-RTLDEFYVSGGGGIDGRKACRLES 709 (930)
Q Consensus 631 i~~L~~L~~L~l~~~~~~~~lp~~i~~L~~L~~L~l~~~~~~~~~p~~i~~l~~L-~~L~~~~~~~~~~~~~~~~~~l~~ 709 (930)
+..+.+|++++++.|.....+|..+.++++|+++++++|.....+|..++.+..+ +.+.... +.+.+..+..+..
T Consensus 121 ~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~----n~l~~~~~~~~~~ 196 (313)
T d1ogqa_ 121 LSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISR----NRLTGKIPPTFAN 196 (313)
T ss_dssp GGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCS----SEEEEECCGGGGG
T ss_pred ccchhhhcccccccccccccCchhhccCcccceeecccccccccccccccccccccccccccc----ccccccccccccc
Confidence 8889999999999998788889999999999999999987666888888887776 4443322 2222222333333
Q ss_pred ccCCCcCCeeeeecccCCCChhhhhhccccCCCCCCeeEEEeeCCCCCCcCCCccchHHHhhcCCCCCCcceEEEeeccC
Q 002362 710 LRSLELLQVCGIRRLGNVTDVGEAKRLELDKMKNLSCLKLLFNKEEGDGQRRKNEDDQLLLEFLQPPPNLRKLLIGSYRG 789 (930)
Q Consensus 710 L~~L~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~ 789 (930)
+..+ .+.+..+...+.++. .+..+++++.++++.+.+.. .+..+..+++|+.|++++|.+
T Consensus 197 l~~~-~l~l~~~~~~~~~~~-------~~~~~~~l~~l~~~~~~l~~------------~~~~~~~~~~L~~L~Ls~N~l 256 (313)
T d1ogqa_ 197 LNLA-FVDLSRNMLEGDASV-------LFGSDKNTQKIHLAKNSLAF------------DLGKVGLSKNLNGLDLRNNRI 256 (313)
T ss_dssp CCCS-EEECCSSEEEECCGG-------GCCTTSCCSEEECCSSEECC------------BGGGCCCCTTCCEEECCSSCC
T ss_pred cccc-ccccccccccccccc-------cccccccccccccccccccc------------cccccccccccccccCccCee
Confidence 3222 233333333333332 45677899999999887765 244577789999999999999
Q ss_pred CCCCCcccccccCccEEEeeCCCCCCCCCCCCCCCCcceeeeccCc
Q 002362 790 KTVFPPWMMSLTNLRSLDLDDCENCEKLPPLGKLPSLEKLSISFMC 835 (930)
Q Consensus 790 ~~~~p~~~~~l~~L~~L~L~~~~~~~~l~~l~~l~~L~~L~L~~~~ 835 (930)
++.+|.+++++++|++|+|++|.+.+.+|.++++++|+.|.+.+++
T Consensus 257 ~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 257 YGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNK 302 (313)
T ss_dssp EECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSS
T ss_pred cccCChHHhCCCCCCEEECcCCcccccCCCcccCCCCCHHHhCCCc
Confidence 8769999999999999999999988889999999999999998764
No 3
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.78 E-value=6.6e-20 Score=195.35 Aligned_cols=225 Identities=20% Similarity=0.199 Sum_probs=163.1
Q ss_pred CcceEEEcCCcccccCCCCCcccCcccccCCCCCeeeccC-Cccc-ccccccccCCcccEEeccCCCCCccccccccccC
Q 002362 582 TSLRVLEFGDWARSLQLGPLTRIPRNIERLVHLRYLNLSN-QSIR-KLPDTLCELYNLQKLDISCCCKLKELPQGIGKLI 659 (930)
Q Consensus 582 ~~Lr~L~L~~~~~~~~~~~~~~lp~~i~~L~~Lr~L~L~~-~~i~-~lp~~i~~L~~L~~L~l~~~~~~~~lp~~i~~L~ 659 (930)
.+++.|+|+++... ....+|..|++|++|++|+|++ |.+. .+|.+|++|++|++|+|++|......|..+..+.
T Consensus 50 ~~v~~L~L~~~~l~----g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~ 125 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLP----KPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIK 125 (313)
T ss_dssp CCEEEEEEECCCCS----SCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCT
T ss_pred EEEEEEECCCCCCC----CCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchh
Confidence 46889999976544 4457899999999999999997 6666 8999999999999999999996666677789999
Q ss_pred CcceEeecCcccccccCCcCCCCCCCCcCCceEeCCCCCcCCCcccccccccCC-CcCCeeeeecccCCCChhhhhhccc
Q 002362 660 NMRHLLNYGTISLRYMPVGIGRLTSLRTLDEFYVSGGGGIDGRKACRLESLRSL-ELLQVCGIRRLGNVTDVGEAKRLEL 738 (930)
Q Consensus 660 ~L~~L~l~~~~~~~~~p~~i~~l~~L~~L~~~~~~~~~~~~~~~~~~l~~L~~L-~~L~~~~~~~~~~~~~~~~~~~~~l 738 (930)
+|+++++++|.....+|..++++++|+.+++..+.... .++..+..+..+ +.+....+...+..+. .+
T Consensus 126 ~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~----~ip~~~~~l~~l~~~l~~~~n~l~~~~~~-------~~ 194 (313)
T d1ogqa_ 126 TLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISG----AIPDSYGSFSKLFTSMTISRNRLTGKIPP-------TF 194 (313)
T ss_dssp TCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEE----ECCGGGGCCCTTCCEEECCSSEEEEECCG-------GG
T ss_pred hhcccccccccccccCchhhccCcccceeecccccccc----ccccccccccccccccccccccccccccc-------cc
Confidence 99999999998888899999999999998876543322 234445455444 3333333333322222 22
Q ss_pred cCCCCCCeeEEEeeCCCCCCcCCCccchHHHhhcCCCCCCcceEEEeeccCCCCCCcccccccCccEEEeeCCCCCCCCC
Q 002362 739 DKMKNLSCLKLLFNKEEGDGQRRKNEDDQLLLEFLQPPPNLRKLLIGSYRGKTVFPPWMMSLTNLRSLDLDDCENCEKLP 818 (930)
Q Consensus 739 ~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~p~~~~~l~~L~~L~L~~~~~~~~l~ 818 (930)
..+ .+..+++..+...+. ++..+...++|+.|+++++.+.+ .+..+..+++|+.|+|++|.+.+.+|
T Consensus 195 ~~l-~~~~l~l~~~~~~~~-----------~~~~~~~~~~l~~l~~~~~~l~~-~~~~~~~~~~L~~L~Ls~N~l~g~iP 261 (313)
T d1ogqa_ 195 ANL-NLAFVDLSRNMLEGD-----------ASVLFGSDKNTQKIHLAKNSLAF-DLGKVGLSKNLNGLDLRNNRIYGTLP 261 (313)
T ss_dssp GGC-CCSEEECCSSEEEEC-----------CGGGCCTTSCCSEEECCSSEECC-BGGGCCCCTTCCEEECCSSCCEECCC
T ss_pred ccc-ccccccccccccccc-----------ccccccccccccccccccccccc-cccccccccccccccCccCeecccCC
Confidence 222 233455555443322 45556677888888888888776 45567778888888888888876776
Q ss_pred C-CCCCCCcceeeeccC
Q 002362 819 P-LGKLPSLEKLSISFM 834 (930)
Q Consensus 819 ~-l~~l~~L~~L~L~~~ 834 (930)
. ++++++|++|+|++|
T Consensus 262 ~~l~~L~~L~~L~Ls~N 278 (313)
T d1ogqa_ 262 QGLTQLKFLHSLNVSFN 278 (313)
T ss_dssp GGGGGCTTCCEEECCSS
T ss_pred hHHhCCCCCCEEECcCC
Confidence 5 888888888888865
No 4
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.77 E-value=2.8e-18 Score=188.63 Aligned_cols=80 Identities=20% Similarity=0.242 Sum_probs=53.7
Q ss_pred CCCCccEEEEccccccccchhhhHHHHHhhcCCcceEEEcCCcccccCCCCCcccCcccccCCCCCeeeccCCccccccc
Q 002362 550 GVKRMRSLIIDYSRYFHLYLNGKILERLFRESTSLRVLEFGDWARSLQLGPLTRIPRNIERLVHLRYLNLSNQSIRKLPD 629 (930)
Q Consensus 550 ~~~~Lr~L~l~~~~~~~~~~~~~~~~~~~~~~~~Lr~L~L~~~~~~~~~~~~~~lp~~i~~L~~Lr~L~L~~~~i~~lp~ 629 (930)
.+.+|++|.+.++.+.+. + .+..+++|++|+|++| .++.+| .+++|++|++|++++|.|..++.
T Consensus 42 ~l~~l~~L~l~~~~I~~l-------~-gl~~L~nL~~L~Ls~N-------~l~~l~-~l~~L~~L~~L~L~~n~i~~i~~ 105 (384)
T d2omza2 42 DLDQVTTLQADRLGIKSI-------D-GVEYLNNLTQINFSNN-------QLTDIT-PLKNLTKLVDILMNNNQIADITP 105 (384)
T ss_dssp HHTTCCEEECCSSCCCCC-------T-TGGGCTTCCEEECCSS-------CCCCCG-GGTTCTTCCEEECCSSCCCCCGG
T ss_pred HhCCCCEEECCCCCCCCc-------c-ccccCCCCCEEeCcCC-------cCCCCc-cccCCcccccccccccccccccc
Confidence 345677777777654332 1 1556777888888744 345555 37777888888888887777654
Q ss_pred ccccCCcccEEeccCCC
Q 002362 630 TLCELYNLQKLDISCCC 646 (930)
Q Consensus 630 ~i~~L~~L~~L~l~~~~ 646 (930)
++++++|++|+++++.
T Consensus 106 -l~~l~~L~~L~~~~~~ 121 (384)
T d2omza2 106 -LANLTNLTGLTLFNNQ 121 (384)
T ss_dssp -GTTCTTCCEEECCSSC
T ss_pred -cccccccccccccccc
Confidence 6777888888877765
No 5
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.74 E-value=1.9e-17 Score=181.88 Aligned_cols=284 Identities=21% Similarity=0.245 Sum_probs=158.7
Q ss_pred cCCcceEEEcCCcccccCCCCCcccCcccccCCCCCeeeccCCcccccccccccCCcccEEeccCCCCCccccccccccC
Q 002362 580 ESTSLRVLEFGDWARSLQLGPLTRIPRNIERLVHLRYLNLSNQSIRKLPDTLCELYNLQKLDISCCCKLKELPQGIGKLI 659 (930)
Q Consensus 580 ~~~~Lr~L~L~~~~~~~~~~~~~~lp~~i~~L~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~l~~~~~~~~lp~~i~~L~ 659 (930)
.+.+|+.|+++++ .+..+ +.|+.|++|++|+|++|.|+.+|. +++|++|++|++++|. +..++. ++.++
T Consensus 42 ~l~~l~~L~l~~~-------~I~~l-~gl~~L~nL~~L~Ls~N~l~~l~~-l~~L~~L~~L~L~~n~-i~~i~~-l~~l~ 110 (384)
T d2omza2 42 DLDQVTTLQADRL-------GIKSI-DGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQ-IADITP-LANLT 110 (384)
T ss_dssp HHTTCCEEECCSS-------CCCCC-TTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC-CCCCGG-GTTCT
T ss_pred HhCCCCEEECCCC-------CCCCc-cccccCCCCCEEeCcCCcCCCCcc-ccCCcccccccccccc-cccccc-ccccc
Confidence 4568999999954 45555 468899999999999999999985 9999999999999998 666664 89999
Q ss_pred CcceEeecCcccccccCCcCCCCCCCCcCCceEeCCCCCcC---------C---CcccccccccCCCcCCeeeeecccCC
Q 002362 660 NMRHLLNYGTISLRYMPVGIGRLTSLRTLDEFYVSGGGGID---------G---RKACRLESLRSLELLQVCGIRRLGNV 727 (930)
Q Consensus 660 ~L~~L~l~~~~~~~~~p~~i~~l~~L~~L~~~~~~~~~~~~---------~---~~~~~l~~L~~L~~L~~~~~~~~~~~ 727 (930)
+|+.|++.++.. ..++. ......+..+....+....... . .....+..+............. ..
T Consensus 111 ~L~~L~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 186 (384)
T d2omza2 111 NLTGLTLFNNQI-TDIDP-LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISS--NK 186 (384)
T ss_dssp TCCEEECCSSCC-CCCGG-GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCS--SC
T ss_pred cccccccccccc-ccccc-ccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccc--cc
Confidence 999999987733 33222 2222222222221111000000 0 0000011111111111000000 00
Q ss_pred CChhhhhhccccCCCCCCeeEEEeeCCCCCCcCCCccchHHHhhcCCCCCCcceEEEeeccCCCCCCcccccccCccEEE
Q 002362 728 TDVGEAKRLELDKMKNLSCLKLLFNKEEGDGQRRKNEDDQLLLEFLQPPPNLRKLLIGSYRGKTVFPPWMMSLTNLRSLD 807 (930)
Q Consensus 728 ~~~~~~~~~~l~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~p~~~~~l~~L~~L~ 807 (930)
.. .......++++..+.++.|.+... . ....+++|++|++++|.+.. + .++..+++|+.|+
T Consensus 187 ~~----~~~~~~~l~~~~~l~l~~n~i~~~------------~-~~~~~~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~ 247 (384)
T d2omza2 187 VS----DISVLAKLTNLESLIATNNQISDI------------T-PLGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLD 247 (384)
T ss_dssp CC----CCGGGGGCTTCSEEECCSSCCCCC------------G-GGGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEE
T ss_pred cc----cccccccccccceeeccCCccCCC------------C-cccccCCCCEEECCCCCCCC-c-chhhcccccchhc
Confidence 00 001233445566666665554431 1 12234556666666665554 2 2445556666666
Q ss_pred eeCCCCCCCCCCCCCCCCcceeeeccCcCceEe---------------CCccccCcccccCccccceeeccc--------
Q 002362 808 LDDCENCEKLPPLGKLPSLEKLSISFMCSVKRV---------------DNEILGIEITIAFPKLKSLTISWI-------- 864 (930)
Q Consensus 808 L~~~~~~~~l~~l~~l~~L~~L~L~~~~~l~~~---------------~~~~~~~~~~~~f~~L~~L~l~~~-------- 864 (930)
+++|.+. .+++++.+++|+.|+++++.- ..+ .+.+.+......+++++.|.++++
T Consensus 248 l~~n~l~-~~~~~~~~~~L~~L~l~~~~l-~~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~l~~l~~l 325 (384)
T d2omza2 248 LANNQIS-NLAPLSGLTKLTELKLGANQI-SNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPV 325 (384)
T ss_dssp CCSSCCC-CCGGGTTCTTCSEEECCSSCC-CCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGGG
T ss_pred cccCccC-CCCcccccccCCEeeccCccc-CCCCccccccccccccccccccccccccchhcccCeEECCCCCCCCCccc
Confidence 6665433 334455556666666554321 111 011111112235677777777766
Q ss_pred -cccccceeeeccCCccCCCCCCCCCCCCccEEEEecC
Q 002362 865 -IMPRLSSLTFDSCPKLKALPDHFHQTTTLKEFNIGWN 901 (930)
Q Consensus 865 -~lp~L~~L~l~~c~~L~~lp~~l~~l~~L~~L~l~~n 901 (930)
.+|+|++|++++| .++.+| .+..+++|++|++++|
T Consensus 326 ~~l~~L~~L~L~~n-~l~~l~-~l~~l~~L~~L~l~~N 361 (384)
T d2omza2 326 SSLTKLQRLFFANN-KVSDVS-SLANLTNINWLSAGHN 361 (384)
T ss_dssp GGCTTCCEEECCSS-CCCCCG-GGGGCTTCCEEECCSS
T ss_pred ccCCCCCEEECCCC-CCCCCh-hHcCCCCCCEEECCCC
Confidence 5788888888888 677776 4777888888888885
No 6
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.71 E-value=7.2e-17 Score=170.81 Aligned_cols=207 Identities=18% Similarity=0.216 Sum_probs=94.2
Q ss_pred CCcccCcccccCCCCCeeeccCCccccccc-ccccCCcccEEeccCCCCCccccccccccCCcceEeecCcccccccCCc
Q 002362 600 PLTRIPRNIERLVHLRYLNLSNQSIRKLPD-TLCELYNLQKLDISCCCKLKELPQGIGKLINMRHLLNYGTISLRYMPVG 678 (930)
Q Consensus 600 ~~~~lp~~i~~L~~Lr~L~L~~~~i~~lp~-~i~~L~~L~~L~l~~~~~~~~lp~~i~~L~~L~~L~l~~~~~~~~~p~~ 678 (930)
.++.+|..+. ..+++|+|++|.|+.+|+ .|.++++|++|++++|......|..|..+++|++|++++| .++.+|..
T Consensus 21 ~L~~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n-~l~~l~~~ 97 (305)
T d1xkua_ 21 GLEKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN-QLKELPEK 97 (305)
T ss_dssp CCCSCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS-CCSBCCSS
T ss_pred CCCccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCC-ccCcCccc
Confidence 3455555543 456666666666666654 4556666666666666533333445566666666666655 34445543
Q ss_pred CCCCCCCCcCCceEeCCCCCcCCCcccccccccCCCcCCeeeeecccCCCChhhhhhccccCCCCCCeeEEEeeCCCCCC
Q 002362 679 IGRLTSLRTLDEFYVSGGGGIDGRKACRLESLRSLELLQVCGIRRLGNVTDVGEAKRLELDKMKNLSCLKLLFNKEEGDG 758 (930)
Q Consensus 679 i~~l~~L~~L~~~~~~~~~~~~~~~~~~l~~L~~L~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~L~~~~~~~~~ 758 (930)
+. ..|..|....+.... .....+.....+..+....+.. .........+..+++|+.++++.|.+..
T Consensus 98 ~~--~~l~~L~~~~n~l~~----l~~~~~~~~~~~~~l~~~~n~~-----~~~~~~~~~~~~l~~L~~l~l~~n~l~~-- 164 (305)
T d1xkua_ 98 MP--KTLQELRVHENEITK----VRKSVFNGLNQMIVVELGTNPL-----KSSGIENGAFQGMKKLSYIRIADTNITT-- 164 (305)
T ss_dssp CC--TTCCEEECCSSCCCB----BCHHHHTTCTTCCEEECCSSCC-----CGGGBCTTGGGGCTTCCEEECCSSCCCS--
T ss_pred hh--hhhhhhhccccchhh----hhhhhhhccccccccccccccc-----cccCCCccccccccccCccccccCCccc--
Confidence 22 233443322221111 0011111111111111111100 0000111134445556666665554432
Q ss_pred cCCCccchHHHhhcCCCCCCcceEEEeeccCCCCCCcccccccCccEEEeeCCCCCCCCCC-CCCCCCcceeeeccC
Q 002362 759 QRRKNEDDQLLLEFLQPPPNLRKLLIGSYRGKTVFPPWMMSLTNLRSLDLDDCENCEKLPP-LGKLPSLEKLSISFM 834 (930)
Q Consensus 759 ~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~p~~~~~l~~L~~L~L~~~~~~~~l~~-l~~l~~L~~L~L~~~ 834 (930)
++. ..+++|+.|++++|......+..+..+++++.|++++|.+....+. +..+++|+.|+|++|
T Consensus 165 ----------l~~--~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N 229 (305)
T d1xkua_ 165 ----------IPQ--GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNN 229 (305)
T ss_dssp ----------CCS--SCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSS
T ss_pred ----------cCc--ccCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeecccc
Confidence 111 1245566666666655554455555566666666666654433222 555666666666654
No 7
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.66 E-value=4.1e-16 Score=164.89 Aligned_cols=250 Identities=17% Similarity=0.139 Sum_probs=154.8
Q ss_pred CcceEEEcCCcccccCCCCCcccCc-ccccCCCCCeeeccCCccccc-ccccccCCcccEEeccCCCCCccccccccccC
Q 002362 582 TSLRVLEFGDWARSLQLGPLTRIPR-NIERLVHLRYLNLSNQSIRKL-PDTLCELYNLQKLDISCCCKLKELPQGIGKLI 659 (930)
Q Consensus 582 ~~Lr~L~L~~~~~~~~~~~~~~lp~-~i~~L~~Lr~L~L~~~~i~~l-p~~i~~L~~L~~L~l~~~~~~~~lp~~i~~L~ 659 (930)
+.+++|+|++| .++.+|. .|.++++|++|++++|.+..+ |..+.++++|++|++++|. ++.+|..+ ..
T Consensus 31 ~~l~~L~Ls~N-------~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~-l~~l~~~~--~~ 100 (305)
T d1xkua_ 31 PDTALLDLQNN-------KITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ-LKELPEKM--PK 100 (305)
T ss_dssp TTCCEEECCSS-------CCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC-CSBCCSSC--CT
T ss_pred CCCCEEECcCC-------cCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCc-cCcCccch--hh
Confidence 45777777743 4556664 567777777777777777766 4457777777777777776 66666543 34
Q ss_pred CcceEeecCcccccccCC-cCCCCCCCCcCCceEeCCCCCcCCCcccccccccCCCcCCeeeeecccCCCChhhhhhccc
Q 002362 660 NMRHLLNYGTISLRYMPV-GIGRLTSLRTLDEFYVSGGGGIDGRKACRLESLRSLELLQVCGIRRLGNVTDVGEAKRLEL 738 (930)
Q Consensus 660 ~L~~L~l~~~~~~~~~p~-~i~~l~~L~~L~~~~~~~~~~~~~~~~~~l~~L~~L~~L~~~~~~~~~~~~~~~~~~~~~l 738 (930)
.|+.|.+.++. +..++. .+.....+..+....+.... .......+..+++|+.+++..+... .++.
T Consensus 101 ~l~~L~~~~n~-l~~l~~~~~~~~~~~~~l~~~~n~~~~--~~~~~~~~~~l~~L~~l~l~~n~l~-~l~~--------- 167 (305)
T d1xkua_ 101 TLQELRVHENE-ITKVRKSVFNGLNQMIVVELGTNPLKS--SGIENGAFQGMKKLSYIRIADTNIT-TIPQ--------- 167 (305)
T ss_dssp TCCEEECCSSC-CCBBCHHHHTTCTTCCEEECCSSCCCG--GGBCTTGGGGCTTCCEEECCSSCCC-SCCS---------
T ss_pred hhhhhhccccc-hhhhhhhhhhccccccccccccccccc--cCCCccccccccccCccccccCCcc-ccCc---------
Confidence 66677766652 333332 23333344443322211111 1111223444455554444443321 1111
Q ss_pred cCCCCCCeeEEEeeCCCCCCcCCCccchHHHhhcCCCCCCcceEEEeeccCCCCCCcccccccCccEEEeeCCCCCCCCC
Q 002362 739 DKMKNLSCLKLLFNKEEGDGQRRKNEDDQLLLEFLQPPPNLRKLLIGSYRGKTVFPPWMMSLTNLRSLDLDDCENCEKLP 818 (930)
Q Consensus 739 ~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~p~~~~~l~~L~~L~L~~~~~~~~l~ 818 (930)
...++|+.|++++|..... ....+..++.+++|++++|.+....|.++.++++|++|+|++|.+....+
T Consensus 168 ~~~~~L~~L~l~~n~~~~~-----------~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~lp~ 236 (305)
T d1xkua_ 168 GLPPSLTELHLDGNKITKV-----------DAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPG 236 (305)
T ss_dssp SCCTTCSEEECTTSCCCEE-----------CTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCT
T ss_pred ccCCccCEEECCCCcCCCC-----------ChhHhhccccccccccccccccccccccccccccceeeeccccccccccc
Confidence 2357899999988876542 34556788899999999999888557888899999999999997664434
Q ss_pred CCCCCCCcceeeeccCcCceEeCCccccCcccccCccccceeeccccccccceeeeccCC
Q 002362 819 PLGKLPSLEKLSISFMCSVKRVDNEILGIEITIAFPKLKSLTISWIIMPRLSSLTFDSCP 878 (930)
Q Consensus 819 ~l~~l~~L~~L~L~~~~~l~~~~~~~~~~~~~~~f~~L~~L~l~~~~lp~L~~L~l~~c~ 878 (930)
.+..+++|++|+|++|. ++.++...+.... .+. .+++|+.|+|.+|+
T Consensus 237 ~l~~l~~L~~L~Ls~N~-i~~i~~~~f~~~~--~~~----------~~~~L~~L~L~~N~ 283 (305)
T d1xkua_ 237 GLADHKYIQVVYLHNNN-ISAIGSNDFCPPG--YNT----------KKASYSGVSLFSNP 283 (305)
T ss_dssp TTTTCSSCCEEECCSSC-CCCCCTTSSSCSS--CCT----------TSCCCSEEECCSSS
T ss_pred ccccccCCCEEECCCCc-cCccChhhccCcc--hhc----------ccCCCCEEECCCCc
Confidence 58999999999999864 6666554332110 000 25677888888775
No 8
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=1.5e-15 Score=156.74 Aligned_cols=184 Identities=21% Similarity=0.156 Sum_probs=118.2
Q ss_pred CCcccCcccccCCCCCeeeccCCccccccc-ccccCCcccEEeccCCCCCccccccccccCCcceEeecCcccccccCCc
Q 002362 600 PLTRIPRNIERLVHLRYLNLSNQSIRKLPD-TLCELYNLQKLDISCCCKLKELPQGIGKLINMRHLLNYGTISLRYMPVG 678 (930)
Q Consensus 600 ~~~~lp~~i~~L~~Lr~L~L~~~~i~~lp~-~i~~L~~L~~L~l~~~~~~~~lp~~i~~L~~L~~L~l~~~~~~~~~p~~ 678 (930)
.++.+|..|. ++|++|+|++|.|+.+|. .+.++++|++|+|++|. +..+|. ++.+++|++|++++| .+...|..
T Consensus 21 ~L~~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~-l~~l~~-~~~l~~L~~L~Ls~N-~l~~~~~~ 95 (266)
T d1p9ag_ 21 NLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAE-LTKLQV-DGTLPVLGTLDLSHN-QLQSLPLL 95 (266)
T ss_dssp CCSSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSC-CCEEEC-CSCCTTCCEEECCSS-CCSSCCCC
T ss_pred CCCeeCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccc-cccccc-ccccccccccccccc-cccccccc
Confidence 5667777664 478888888888887764 57788888888888886 667764 567888888888887 45566666
Q ss_pred CCCCCCCCcCCceEeCCCCCcCCCcccccccccCCCcCCeeeeecccCCCChhhhhhccccCCCCCCeeEEEeeCCCCCC
Q 002362 679 IGRLTSLRTLDEFYVSGGGGIDGRKACRLESLRSLELLQVCGIRRLGNVTDVGEAKRLELDKMKNLSCLKLLFNKEEGDG 758 (930)
Q Consensus 679 i~~l~~L~~L~~~~~~~~~~~~~~~~~~l~~L~~L~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~L~~~~~~~~~ 758 (930)
+..+++|+.|++..+.... .... .+..+.++..|.++.|.+...
T Consensus 96 ~~~l~~L~~L~l~~~~~~~----~~~~-------------------------------~~~~l~~l~~L~l~~n~l~~l- 139 (266)
T d1p9ag_ 96 GQTLPALTVLDVSFNRLTS----LPLG-------------------------------ALRGLGELQELYLKGNELKTL- 139 (266)
T ss_dssp TTTCTTCCEEECCSSCCCC----CCSS-------------------------------TTTTCTTCCEEECTTSCCCCC-
T ss_pred cccccccccccccccccce----eecc-------------------------------cccccccccccccccccccee-
Confidence 7777777777654332211 0011 223445566666666655432
Q ss_pred cCCCccchHHHhhcCCCCCCcceEEEeeccCCCCCCcccccccCccEEEeeCCCCCCCCCC-CCCCCCcceeeeccCc
Q 002362 759 QRRKNEDDQLLLEFLQPPPNLRKLLIGSYRGKTVFPPWMMSLTNLRSLDLDDCENCEKLPP-LGKLPSLEKLSISFMC 835 (930)
Q Consensus 759 ~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~p~~~~~l~~L~~L~L~~~~~~~~l~~-l~~l~~L~~L~L~~~~ 835 (930)
....+..+++|+.|++++|.+....+..+..+++|++|+|++|.+. .+|. +..+++|+.|+|++++
T Consensus 140 ----------~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np 206 (266)
T d1p9ag_ 140 ----------PPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNP 206 (266)
T ss_dssp ----------CTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCC
T ss_pred ----------ccccccccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCC
Confidence 1223445667777777777776633455666777777777777655 4443 6667777777777543
No 9
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=4.5e-15 Score=154.88 Aligned_cols=212 Identities=19% Similarity=0.115 Sum_probs=126.6
Q ss_pred CCcccCcccccCCCCCeeeccCCccccccc-ccccCCcccEEeccCCCCCccccccccccCCcceEeecCccccccc-CC
Q 002362 600 PLTRIPRNIERLVHLRYLNLSNQSIRKLPD-TLCELYNLQKLDISCCCKLKELPQGIGKLINMRHLLNYGTISLRYM-PV 677 (930)
Q Consensus 600 ~~~~lp~~i~~L~~Lr~L~L~~~~i~~lp~-~i~~L~~L~~L~l~~~~~~~~lp~~i~~L~~L~~L~l~~~~~~~~~-p~ 677 (930)
.++.+|..|. ..+++|+|++|.|+.+|. .+.++++|++|++++|......+..+..+..++++....+..+..+ |.
T Consensus 22 ~L~~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~ 99 (284)
T d1ozna_ 22 GLQAVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPA 99 (284)
T ss_dssp CCSSCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTT
T ss_pred CCCccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccch
Confidence 4566666554 456777777777777764 4677777777777777633333344456677777766555444444 34
Q ss_pred cCCCCCCCCcCCceEeCCCCCcCCCcccccccccCCCcCCeeeeecccCCCChhhhhhccccCCCCCCeeEEEeeCCCCC
Q 002362 678 GIGRLTSLRTLDEFYVSGGGGIDGRKACRLESLRSLELLQVCGIRRLGNVTDVGEAKRLELDKMKNLSCLKLLFNKEEGD 757 (930)
Q Consensus 678 ~i~~l~~L~~L~~~~~~~~~~~~~~~~~~l~~L~~L~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~L~~~~~~~~ 757 (930)
.++.+++|++|++..+.... .....+..+.+|+.+.+.++......+. .+..+++|+.|++++|.+...
T Consensus 100 ~~~~l~~L~~L~l~~n~~~~----~~~~~~~~~~~L~~l~l~~N~l~~i~~~-------~f~~~~~L~~L~l~~N~l~~l 168 (284)
T d1ozna_ 100 TFHGLGRLHTLHLDRCGLQE----LGPGLFRGLAALQYLYLQDNALQALPDD-------TFRDLGNLTHLFLHGNRISSV 168 (284)
T ss_dssp TTTTCTTCCEEECTTSCCCC----CCTTTTTTCTTCCEEECCSSCCCCCCTT-------TTTTCTTCCEEECCSSCCCEE
T ss_pred hhcccccCCEEecCCccccc----ccccccchhcccchhhhccccccccChh-------HhccccchhhcccccCccccc
Confidence 46667777776654333211 1122333444444444444333221111 345566777777777766541
Q ss_pred CcCCCccchHHHhhcCCCCCCcceEEEeeccCCCCCCcccccccCccEEEeeCCCCCCCCCC-CCCCCCcceeeeccCc
Q 002362 758 GQRRKNEDDQLLLEFLQPPPNLRKLLIGSYRGKTVFPPWMMSLTNLRSLDLDDCENCEKLPP-LGKLPSLEKLSISFMC 835 (930)
Q Consensus 758 ~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~p~~~~~l~~L~~L~L~~~~~~~~l~~-l~~l~~L~~L~L~~~~ 835 (930)
....+..+++|+.|.+++|.+....|.+|..+++|+.|++++|.+....+. ++.+++|++|+|++++
T Consensus 169 -----------~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~ 236 (284)
T d1ozna_ 169 -----------PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNP 236 (284)
T ss_dssp -----------CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSC
T ss_pred -----------chhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCC
Confidence 233456677777788777777765577777777788888877776554433 6777777777777543
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=2.5e-14 Score=147.26 Aligned_cols=198 Identities=18% Similarity=0.122 Sum_probs=150.2
Q ss_pred cCCCCCeeeccCCcccccccccccCCcccEEeccCCCCCcccc-ccccccCCcceEeecCcccccccCCcCCCCCCCCcC
Q 002362 610 RLVHLRYLNLSNQSIRKLPDTLCELYNLQKLDISCCCKLKELP-QGIGKLINMRHLLNYGTISLRYMPVGIGRLTSLRTL 688 (930)
Q Consensus 610 ~L~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~l~~~~~~~~lp-~~i~~L~~L~~L~l~~~~~~~~~p~~i~~l~~L~~L 688 (930)
+...+...+.++++++.+|..+. ++|++|+|++|. +..+| ..|..+++|++|++++| .++.+|. ++.+++|++|
T Consensus 8 ~~~~~~~v~C~~~~L~~iP~~lp--~~l~~L~Ls~N~-i~~l~~~~f~~l~~L~~L~L~~N-~l~~l~~-~~~l~~L~~L 82 (266)
T d1p9ag_ 8 KVASHLEVNCDKRNLTALPPDLP--KDTTILHLSENL-LYTFSLATLMPYTRLTQLNLDRA-ELTKLQV-DGTLPVLGTL 82 (266)
T ss_dssp CSTTCCEEECTTSCCSSCCSCCC--TTCCEEECTTSC-CSEEEGGGGTTCTTCCEEECTTS-CCCEEEC-CSCCTTCCEE
T ss_pred ccCCCeEEEccCCCCCeeCcCcC--cCCCEEECcCCc-CCCcCHHHhhccccccccccccc-ccccccc-cccccccccc
Confidence 44556667899999999998774 689999999998 67776 56899999999999998 5666664 5677778777
Q ss_pred CceEeCCCCCcCCCcccccccccCCCcCCeeeeecccCCCChhhhhhccccCCCCCCeeEEEeeCCCCCCcCCCccchHH
Q 002362 689 DEFYVSGGGGIDGRKACRLESLRSLELLQVCGIRRLGNVTDVGEAKRLELDKMKNLSCLKLLFNKEEGDGQRRKNEDDQL 768 (930)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~l~~L~~L~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~ 768 (930)
++..+.... .+. .+..+++|+.|+++++.....
T Consensus 83 ~Ls~N~l~~-----------------------------~~~-------~~~~l~~L~~L~l~~~~~~~~----------- 115 (266)
T d1p9ag_ 83 DLSHNQLQS-----------------------------LPL-------LGQTLPALTVLDVSFNRLTSL----------- 115 (266)
T ss_dssp ECCSSCCSS-----------------------------CCC-------CTTTCTTCCEEECCSSCCCCC-----------
T ss_pred ccccccccc-----------------------------ccc-------cccccccccccccccccccee-----------
Confidence 754332111 111 244567888899888876652
Q ss_pred HhhcCCCCCCcceEEEeeccCCCCCCcccccccCccEEEeeCCCCCCCCCC-CCCCCCcceeeeccCcCceEeCCccccC
Q 002362 769 LLEFLQPPPNLRKLLIGSYRGKTVFPPWMMSLTNLRSLDLDDCENCEKLPP-LGKLPSLEKLSISFMCSVKRVDNEILGI 847 (930)
Q Consensus 769 ~~~~l~~~~~L~~L~l~~~~~~~~~p~~~~~l~~L~~L~L~~~~~~~~l~~-l~~l~~L~~L~L~~~~~l~~~~~~~~~~ 847 (930)
....+..+++++.|.+++|.+....+.++..+++|+.|++++|.+....+. ++.+++|++|+|++|. ++.++..++
T Consensus 116 ~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-L~~lp~~~~-- 192 (266)
T d1p9ag_ 116 PLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENS-LYTIPKGFF-- 192 (266)
T ss_dssp CSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSC-CCCCCTTTT--
T ss_pred eccccccccccccccccccccceeccccccccccchhcccccccccccCccccccccccceeecccCC-CcccChhHC--
Confidence 234456788999999999999884455666899999999999987765544 8999999999999875 666665544
Q ss_pred cccccCccccceeeccccc
Q 002362 848 EITIAFPKLKSLTISWIIM 866 (930)
Q Consensus 848 ~~~~~f~~L~~L~l~~~~l 866 (930)
.+++|+.|.+++|.+
T Consensus 193 ----~~~~L~~L~L~~Np~ 207 (266)
T d1p9ag_ 193 ----GSHLLPFAFLHGNPW 207 (266)
T ss_dssp ----TTCCCSEEECCSCCB
T ss_pred ----CCCCCCEEEecCCCC
Confidence 578999999999843
No 11
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.52 E-value=1e-14 Score=146.48 Aligned_cols=189 Identities=19% Similarity=0.177 Sum_probs=101.7
Q ss_pred cccCCCCCeeeccCCcccccccccccCCcccEEeccCCCCCccccccccccCCcceEeecCcccccccCCcCCCCCCCCc
Q 002362 608 IERLVHLRYLNLSNQSIRKLPDTLCELYNLQKLDISCCCKLKELPQGIGKLINMRHLLNYGTISLRYMPVGIGRLTSLRT 687 (930)
Q Consensus 608 i~~L~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~l~~~~~~~~lp~~i~~L~~L~~L~l~~~~~~~~~p~~i~~l~~L~~ 687 (930)
+..|.+|++|++.+|+|+.++ .+..+++|++|++++|. +..++. +.++++|++|++++|. .+.++ +++.+++|+.
T Consensus 37 ~~~l~~L~~L~l~~~~i~~l~-~l~~l~~L~~L~ls~n~-i~~~~~-l~~l~~l~~l~~~~n~-~~~i~-~l~~l~~L~~ 111 (227)
T d1h6ua2 37 QADLDGITTLSAFGTGVTTIE-GVQYLNNLIGLELKDNQ-ITDLAP-LKNLTKITELELSGNP-LKNVS-AIAGLQSIKT 111 (227)
T ss_dssp HHHHHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSC-CCCCGG-GTTCCSCCEEECCSCC-CSCCG-GGTTCTTCCE
T ss_pred HHHcCCcCEEECCCCCCCcch-hHhcCCCCcEeecCCce-eecccc-cccccccccccccccc-ccccc-cccccccccc
Confidence 344556666666666666653 35666666666666665 333332 5566666666665552 23332 3455555555
Q ss_pred CCceEeCCCCCcCCCcccccccccCCCcCCeeeeecccCCCChhhhhhccccCCCCCCeeEEEeeCCCCCCcCCCccchH
Q 002362 688 LDEFYVSGGGGIDGRKACRLESLRSLELLQVCGIRRLGNVTDVGEAKRLELDKMKNLSCLKLLFNKEEGDGQRRKNEDDQ 767 (930)
Q Consensus 688 L~~~~~~~~~~~~~~~~~~l~~L~~L~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~L~~~~~~~~~~~~~~~~~~ 767 (930)
+.+..+.... ...+.....+..+.+..+.... . ..+..+++|+.|.+++|.+...
T Consensus 112 l~l~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~---~------~~~~~~~~L~~L~l~~n~~~~~---------- 166 (227)
T d1h6ua2 112 LDLTSTQITD------VTPLAGLSNLQVLYLDLNQITN---I------SPLAGLTNLQYLSIGNAQVSDL---------- 166 (227)
T ss_dssp EECTTSCCCC------CGGGTTCTTCCEEECCSSCCCC---C------GGGGGCTTCCEEECCSSCCCCC----------
T ss_pred cccccccccc------cchhccccchhhhhchhhhhch---h------hhhccccccccccccccccccc----------
Confidence 5433222111 1112222222222221111100 0 0244566777777777665431
Q ss_pred HHhhcCCCCCCcceEEEeeccCCCCCCcccccccCccEEEeeCCCCCCCCCCCCCCCCcceeeec
Q 002362 768 LLLEFLQPPPNLRKLLIGSYRGKTVFPPWMMSLTNLRSLDLDDCENCEKLPPLGKLPSLEKLSIS 832 (930)
Q Consensus 768 ~~~~~l~~~~~L~~L~l~~~~~~~~~p~~~~~l~~L~~L~L~~~~~~~~l~~l~~l~~L~~L~L~ 832 (930)
..+..+++|+.|++++|.+.. +| .+..+++|++|+|++|.+ +.+++++++++|+.|+|+
T Consensus 167 ---~~l~~l~~L~~L~Ls~n~l~~-l~-~l~~l~~L~~L~Ls~N~l-t~i~~l~~l~~L~~L~ls 225 (227)
T d1h6ua2 167 ---TPLANLSKLTTLKADDNKISD-IS-PLASLPNLIEVHLKNNQI-SDVSPLANTSNLFIVTLT 225 (227)
T ss_dssp ---GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECTTSCC-CBCGGGTTCTTCCEEEEE
T ss_pred ---hhhcccccceecccCCCccCC-Ch-hhcCCCCCCEEECcCCcC-CCCcccccCCCCCEEEee
Confidence 224566777888887777665 44 366777788888877753 356667777777777775
No 12
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.46 E-value=9.9e-13 Score=141.56 Aligned_cols=46 Identities=28% Similarity=0.454 Sum_probs=33.9
Q ss_pred cCccccceeeccc-------cccccceeeeccCCccCCCCCCCCCCCCccEEEEecC
Q 002362 852 AFPKLKSLTISWI-------IMPRLSSLTFDSCPKLKALPDHFHQTTTLKEFNIGWN 901 (930)
Q Consensus 852 ~f~~L~~L~l~~~-------~lp~L~~L~l~~c~~L~~lp~~l~~l~~L~~L~l~~n 901 (930)
.+++|++|++++| .+|+|+.|++++| .++.+|.. +++|++|++++|
T Consensus 282 ~~~~L~~L~Ls~N~l~~lp~~~~~L~~L~L~~N-~L~~l~~~---~~~L~~L~L~~N 334 (353)
T d1jl5a_ 282 LPPSLEELNVSNNKLIELPALPPRLERLIASFN-HLAEVPEL---PQNLKQLHVEYN 334 (353)
T ss_dssp CCTTCCEEECCSSCCSCCCCCCTTCCEEECCSS-CCSCCCCC---CTTCCEEECCSS
T ss_pred cCCCCCEEECCCCccCccccccCCCCEEECCCC-cCCccccc---cCCCCEEECcCC
Confidence 4567777777766 4678888888887 67888754 457888888884
No 13
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=4.7e-14 Score=146.94 Aligned_cols=204 Identities=16% Similarity=0.086 Sum_probs=129.3
Q ss_pred cceEEEcCCcccccCCCCCcccCc-ccccCCCCCeeeccCCccccccc-ccccCCcccEEeccCCCCCccc-cccccccC
Q 002362 583 SLRVLEFGDWARSLQLGPLTRIPR-NIERLVHLRYLNLSNQSIRKLPD-TLCELYNLQKLDISCCCKLKEL-PQGIGKLI 659 (930)
Q Consensus 583 ~Lr~L~L~~~~~~~~~~~~~~lp~-~i~~L~~Lr~L~L~~~~i~~lp~-~i~~L~~L~~L~l~~~~~~~~l-p~~i~~L~ 659 (930)
.+++|+|++| .++.+|. .+.++.+|++|++++|.+..++. .+..+..+..++...+..+..+ |..+..++
T Consensus 33 ~~~~L~Ls~N-------~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~ 105 (284)
T d1ozna_ 33 ASQRIFLHGN-------RISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLG 105 (284)
T ss_dssp TCSEEECTTS-------CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCT
T ss_pred CCCEEECcCC-------cCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccc
Confidence 4566666643 3445543 46666677777777766665543 3445666666666555445555 34456667
Q ss_pred CcceEeecCcccccccCCcCCCCCCCCcCCceEeCCCCCcCCCcccccccccCCCcCCeeeeecccCCCChhhhhhcccc
Q 002362 660 NMRHLLNYGTISLRYMPVGIGRLTSLRTLDEFYVSGGGGIDGRKACRLESLRSLELLQVCGIRRLGNVTDVGEAKRLELD 739 (930)
Q Consensus 660 ~L~~L~l~~~~~~~~~p~~i~~l~~L~~L~~~~~~~~~~~~~~~~~~l~~L~~L~~L~~~~~~~~~~~~~~~~~~~~~l~ 739 (930)
+|++|++++|......+..++.+.+|+.+++..+.... .....+..+++|+.|.+.++......+. .+.
T Consensus 106 ~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~----i~~~~f~~~~~L~~L~l~~N~l~~l~~~-------~f~ 174 (284)
T d1ozna_ 106 RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA----LPDDTFRDLGNLTHLFLHGNRISSVPER-------AFR 174 (284)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC----CCTTTTTTCTTCCEEECCSSCCCEECTT-------TTT
T ss_pred cCCEEecCCcccccccccccchhcccchhhhccccccc----cChhHhccccchhhcccccCcccccchh-------hhc
Confidence 77777776664322233345556666666654433322 1123455556666666555543222222 566
Q ss_pred CCCCCCeeEEEeeCCCCCCcCCCccchHHHhhcCCCCCCcceEEEeeccCCCCCCcccccccCccEEEeeCCCCCC
Q 002362 740 KMKNLSCLKLLFNKEEGDGQRRKNEDDQLLLEFLQPPPNLRKLLIGSYRGKTVFPPWMMSLTNLRSLDLDDCENCE 815 (930)
Q Consensus 740 ~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~p~~~~~l~~L~~L~L~~~~~~~ 815 (930)
++++|+.+.++.|.+... .+..+..+++|++|++++|.+.+..|.++..+++|++|+|++|++.-
T Consensus 175 ~l~~L~~l~l~~N~l~~i-----------~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 175 GLHSLDRLLLHQNRVAHV-----------HPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (284)
T ss_dssp TCTTCCEEECCSSCCCEE-----------CTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred cccccchhhhhhcccccc-----------ChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCC
Confidence 788999999999887753 35667888999999999999988556788899999999999987543
No 14
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.43 E-value=1.2e-12 Score=140.89 Aligned_cols=131 Identities=22% Similarity=0.213 Sum_probs=76.5
Q ss_pred eeEEEEEecCCccccccccCCCCccEEEEccccccccchhhhHHHHHhhcCCcceEEEcCCcccccCCCCCcccCccccc
Q 002362 531 VRHLLLIVGNGASFPVSTCGVKRMRSLIIDYSRYFHLYLNGKILERLFRESTSLRVLEFGDWARSLQLGPLTRIPRNIER 610 (930)
Q Consensus 531 ~r~l~l~~~~~~~~~~~~~~~~~Lr~L~l~~~~~~~~~~~~~~~~~~~~~~~~Lr~L~L~~~~~~~~~~~~~~lp~~i~~ 610 (930)
+++|.+..+.+..+|. ..++|++|+++++.+... + ..+.+|+.|++.+|... .+..+|
T Consensus 40 l~~LdLs~~~L~~lp~---~~~~L~~L~Ls~N~l~~l-------p---~~~~~L~~L~l~~n~l~----~l~~lp----- 97 (353)
T d1jl5a_ 40 AHELELNNLGLSSLPE---LPPHLESLVASCNSLTEL-------P---ELPQSLKSLLVDNNNLK----ALSDLP----- 97 (353)
T ss_dssp CSEEECTTSCCSCCCS---CCTTCSEEECCSSCCSSC-------C---CCCTTCCEEECCSSCCS----CCCSCC-----
T ss_pred CCEEEeCCCCCCCCCC---CCCCCCEEECCCCCCccc-------c---cchhhhhhhhhhhcccc----hhhhhc-----
Confidence 4455555555555553 246788888877764321 1 22457788888865443 444333
Q ss_pred CCCCCeeeccCCcccccccccccCCcccEEeccCCCCCccccccccccCCcceEeecCcccccccCCcCCCCCCCCcCCc
Q 002362 611 LVHLRYLNLSNQSIRKLPDTLCELYNLQKLDISCCCKLKELPQGIGKLINMRHLLNYGTISLRYMPVGIGRLTSLRTLDE 690 (930)
Q Consensus 611 L~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~l~~~~~~~~lp~~i~~L~~L~~L~l~~~~~~~~~p~~i~~l~~L~~L~~ 690 (930)
..|++|++++|.+..+|. ++.+++|++|++++|. ....|..+ ..+..|.+..+.. ..+..++.++.++.|.+
T Consensus 98 -~~L~~L~L~~n~l~~lp~-~~~l~~L~~L~l~~~~-~~~~~~~~---~~l~~l~~~~~~~--~~~~~l~~l~~l~~L~l 169 (353)
T d1jl5a_ 98 -PLLEYLGVSNNQLEKLPE-LQNSSFLKIIDVDNNS-LKKLPDLP---PSLEFIAAGNNQL--EELPELQNLPFLTAIYA 169 (353)
T ss_dssp -TTCCEEECCSSCCSSCCC-CTTCTTCCEEECCSSC-CSCCCCCC---TTCCEEECCSSCC--SSCCCCTTCTTCCEEEC
T ss_pred -cccccccccccccccccc-hhhhccceeecccccc-cccccccc---ccccchhhccccc--cccccccccccceeccc
Confidence 357888888888888775 5678888888888776 44444432 3444555544321 22334555566665554
Q ss_pred e
Q 002362 691 F 691 (930)
Q Consensus 691 ~ 691 (930)
.
T Consensus 170 ~ 170 (353)
T d1jl5a_ 170 D 170 (353)
T ss_dssp C
T ss_pred c
Confidence 3
No 15
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.42 E-value=2.7e-13 Score=132.52 Aligned_cols=163 Identities=22% Similarity=0.265 Sum_probs=96.4
Q ss_pred ccCCCCCeeeccCCcccccccccccCCcccEEeccCCCCCccccccccccCCcceEeecCcccccccCCcCCCCCCCCcC
Q 002362 609 ERLVHLRYLNLSNQSIRKLPDTLCELYNLQKLDISCCCKLKELPQGIGKLINMRHLLNYGTISLRYMPVGIGRLTSLRTL 688 (930)
Q Consensus 609 ~~L~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~l~~~~~~~~lp~~i~~L~~L~~L~l~~~~~~~~~p~~i~~l~~L~~L 688 (930)
..+.+|++|+++++.|+.++ .+..+++|++|++++|. +..++. ++++++|++|++++|. ...+| .++.+++|+.|
T Consensus 37 ~~l~~l~~L~l~~~~i~~l~-~l~~l~nL~~L~Ls~N~-l~~~~~-l~~l~~L~~L~l~~n~-~~~~~-~l~~l~~L~~L 111 (199)
T d2omxa2 37 TDLDQVTTLQADRLGIKSID-GVEYLNNLTQINFSNNQ-LTDITP-LKNLTKLVDILMNNNQ-IADIT-PLANLTNLTGL 111 (199)
T ss_dssp HHHTTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSC-CCCCGG-GTTCTTCCEEECCSSC-CCCCG-GGTTCTTCSEE
T ss_pred HHhcCCCEEECCCCCCCCcc-ccccCCCcCcCcccccc-ccCccc-ccCCcccccccccccc-ccccc-ccccccccccc
Confidence 35667777777777777664 36677777777777775 555554 6777777777777663 33333 24555555555
Q ss_pred CceEeCCCCCcCCCcccccccccCCCcCCeeeeecccCCCChhhhhhccccCCCCCCeeEEEeeCCCCCCcCCCccchHH
Q 002362 689 DEFYVSGGGGIDGRKACRLESLRSLELLQVCGIRRLGNVTDVGEAKRLELDKMKNLSCLKLLFNKEEGDGQRRKNEDDQL 768 (930)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~l~~L~~L~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~ 768 (930)
++..+.... .. .+..+++|+.|++++|.+..
T Consensus 112 ~l~~~~~~~------~~-------------------------------~~~~l~~L~~L~l~~n~l~~------------ 142 (199)
T d2omxa2 112 TLFNNQITD------ID-------------------------------PLKNLTNLNRLELSSNTISD------------ 142 (199)
T ss_dssp ECCSSCCCC------CG-------------------------------GGTTCTTCSEEECCSSCCCC------------
T ss_pred ccccccccc------cc-------------------------------ccchhhhhHHhhhhhhhhcc------------
Confidence 432211110 00 12334556666666665443
Q ss_pred HhhcCCCCCCcceEEEeeccCCCCCCcccccccCccEEEeeCCCCCCCCCCCCCCCCccee
Q 002362 769 LLEFLQPPPNLRKLLIGSYRGKTVFPPWMMSLTNLRSLDLDDCENCEKLPPLGKLPSLEKL 829 (930)
Q Consensus 769 ~~~~l~~~~~L~~L~l~~~~~~~~~p~~~~~l~~L~~L~L~~~~~~~~l~~l~~l~~L~~L 829 (930)
...+..+++|+.|++.+|.+.. ++ .+.++++|+.|+|++|.+ +.++.++.+++|+.|
T Consensus 143 -~~~l~~~~~L~~L~l~~n~l~~-l~-~l~~l~~L~~L~ls~N~i-~~i~~l~~L~~L~~L 199 (199)
T d2omxa2 143 -ISALSGLTSLQQLNFSSNQVTD-LK-PLANLTTLERLDISSNKV-SDISVLAKLTNLESL 199 (199)
T ss_dssp -CGGGTTCTTCSEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCC-CCCGGGGGCTTCSEE
T ss_pred -cccccccccccccccccccccC-Cc-cccCCCCCCEEECCCCCC-CCCccccCCCCCCcC
Confidence 2234556677777777777665 44 366777777777777754 345666667777654
No 16
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.40 E-value=3.9e-13 Score=134.69 Aligned_cols=188 Identities=21% Similarity=0.209 Sum_probs=115.1
Q ss_pred cCCcceEEEcCCcccccCCCCCcccCcccccCCCCCeeeccCCcccccccccccCCcccEEeccCCCCCccccccccccC
Q 002362 580 ESTSLRVLEFGDWARSLQLGPLTRIPRNIERLVHLRYLNLSNQSIRKLPDTLCELYNLQKLDISCCCKLKELPQGIGKLI 659 (930)
Q Consensus 580 ~~~~Lr~L~L~~~~~~~~~~~~~~lp~~i~~L~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~l~~~~~~~~lp~~i~~L~ 659 (930)
.+..|+.|++.+| .+..++ .+.+|++|++|++++|.|..++. +.++++|++|++++|. .+.++ .+.+++
T Consensus 39 ~l~~L~~L~l~~~-------~i~~l~-~l~~l~~L~~L~ls~n~i~~~~~-l~~l~~l~~l~~~~n~-~~~i~-~l~~l~ 107 (227)
T d1h6ua2 39 DLDGITTLSAFGT-------GVTTIE-GVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNP-LKNVS-AIAGLQ 107 (227)
T ss_dssp HHHTCCEEECTTS-------CCCCCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCC-CSCCG-GGTTCT
T ss_pred HcCCcCEEECCCC-------CCCcch-hHhcCCCCcEeecCCceeecccc-cccccccccccccccc-ccccc-cccccc
Confidence 3456666777633 344453 46667777777777776666543 6667777777777665 44444 366667
Q ss_pred CcceEeecCcccccccCCcCCCCCCCCcCCceEeCCCCCcCCCcccccccccCCCcCCeeeeecccCCCChhhhhhcccc
Q 002362 660 NMRHLLNYGTISLRYMPVGIGRLTSLRTLDEFYVSGGGGIDGRKACRLESLRSLELLQVCGIRRLGNVTDVGEAKRLELD 739 (930)
Q Consensus 660 ~L~~L~l~~~~~~~~~p~~i~~l~~L~~L~~~~~~~~~~~~~~~~~~l~~L~~L~~L~~~~~~~~~~~~~~~~~~~~~l~ 739 (930)
+|+.|.++++.. ... ..+...+.++.+.+..+.... ...+...++|+.|.+.++..... ..+.
T Consensus 108 ~L~~l~l~~~~~-~~~-~~~~~~~~~~~l~~~~~~~~~------~~~~~~~~~L~~L~l~~n~~~~~---------~~l~ 170 (227)
T d1h6ua2 108 SIKTLDLTSTQI-TDV-TPLAGLSNLQVLYLDLNQITN------ISPLAGLTNLQYLSIGNAQVSDL---------TPLA 170 (227)
T ss_dssp TCCEEECTTSCC-CCC-GGGTTCTTCCEEECCSSCCCC------CGGGGGCTTCCEEECCSSCCCCC---------GGGT
T ss_pred cccccccccccc-ccc-chhccccchhhhhchhhhhch------hhhhccccccccccccccccccc---------hhhc
Confidence 777777666532 111 223444455554433222211 22344455555555444332111 1356
Q ss_pred CCCCCCeeEEEeeCCCCCCcCCCccchHHHhhcCCCCCCcceEEEeeccCCCCCCcccccccCccEEEeeC
Q 002362 740 KMKNLSCLKLLFNKEEGDGQRRKNEDDQLLLEFLQPPPNLRKLLIGSYRGKTVFPPWMMSLTNLRSLDLDD 810 (930)
Q Consensus 740 ~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~p~~~~~l~~L~~L~L~~ 810 (930)
.+++|+.|++++|.+.+ + ..+..+++|++|+|++|.+++ +|. +.++++|+.|+|++
T Consensus 171 ~l~~L~~L~Ls~n~l~~------------l-~~l~~l~~L~~L~Ls~N~lt~-i~~-l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 171 NLSKLTTLKADDNKISD------------I-SPLASLPNLIEVHLKNNQISD-VSP-LANTSNLFIVTLTN 226 (227)
T ss_dssp TCTTCCEEECCSSCCCC------------C-GGGGGCTTCCEEECTTSCCCB-CGG-GTTCTTCCEEEEEE
T ss_pred ccccceecccCCCccCC------------C-hhhcCCCCCCEEECcCCcCCC-Ccc-cccCCCCCEEEeeC
Confidence 78899999999988765 2 235677899999999999887 664 78999999999975
No 17
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.38 E-value=3.6e-13 Score=132.83 Aligned_cols=55 Identities=24% Similarity=0.290 Sum_probs=40.4
Q ss_pred CCCCcceEEEeeccCCCCCCcccccccCccEEEeeCCCCCCCCCCCCCCCCcceeeec
Q 002362 775 PPPNLRKLLIGSYRGKTVFPPWMMSLTNLRSLDLDDCENCEKLPPLGKLPSLEKLSIS 832 (930)
Q Consensus 775 ~~~~L~~L~l~~~~~~~~~p~~~~~l~~L~~L~L~~~~~~~~l~~l~~l~~L~~L~L~ 832 (930)
.+++|+.+++++|.+.+ ++. +.++++|+.|+|++|.+ +.+|.+..+++|++|+|+
T Consensus 154 ~l~~L~~l~l~~n~l~~-i~~-l~~l~~L~~L~Ls~N~i-~~l~~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 154 RLTKLDTLSLEDNQISD-IVP-LAGLTKLQNLYLSKNHI-SDLRALAGLKNLDVLELF 208 (210)
T ss_dssp GCTTCSEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCC-CBCGGGTTCTTCSEEEEE
T ss_pred ccccccccccccccccc-ccc-ccCCCCCCEEECCCCCC-CCChhhcCCCCCCEEEcc
Confidence 45677777777777766 443 66788888888888854 356778888888888876
No 18
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=9.2e-13 Score=133.47 Aligned_cols=93 Identities=17% Similarity=0.192 Sum_probs=61.3
Q ss_pred CCcccCcccccCCCCCeeeccCCccccccc-ccccCCcccEEeccCCCCCccccc-cccccCCcceEeecCcccccccC-
Q 002362 600 PLTRIPRNIERLVHLRYLNLSNQSIRKLPD-TLCELYNLQKLDISCCCKLKELPQ-GIGKLINMRHLLNYGTISLRYMP- 676 (930)
Q Consensus 600 ~~~~lp~~i~~L~~Lr~L~L~~~~i~~lp~-~i~~L~~L~~L~l~~~~~~~~lp~-~i~~L~~L~~L~l~~~~~~~~~p- 676 (930)
.++.+|..+. .++++|+|++|.|+.+|. .|.++++|++|++++|.....+|. .+..++++++|.+..+..+...+
T Consensus 19 ~l~~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~ 96 (242)
T d1xwdc1 19 KVTEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINP 96 (242)
T ss_dssp SCSSCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECT
T ss_pred CCCCcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccccccccccc
Confidence 4566676553 467888888888887776 467788888888888775554443 46677788887776544444333
Q ss_pred CcCCCCCCCCcCCceEeC
Q 002362 677 VGIGRLTSLRTLDEFYVS 694 (930)
Q Consensus 677 ~~i~~l~~L~~L~~~~~~ 694 (930)
..+..+++|++|.+..+.
T Consensus 97 ~~~~~l~~L~~l~l~~~~ 114 (242)
T d1xwdc1 97 EAFQNLPNLQYLLISNTG 114 (242)
T ss_dssp TSEECCTTCCEEEEESCC
T ss_pred ccccccccccccccchhh
Confidence 446677777777765443
No 19
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.32 E-value=1.8e-12 Score=127.65 Aligned_cols=164 Identities=20% Similarity=0.202 Sum_probs=98.6
Q ss_pred CcceEEEcCCcccccCCCCCcccCcccccCCCCCeeeccCCcccccccccccCCcccEEeccCCCCCccccccccccCCc
Q 002362 582 TSLRVLEFGDWARSLQLGPLTRIPRNIERLVHLRYLNLSNQSIRKLPDTLCELYNLQKLDISCCCKLKELPQGIGKLINM 661 (930)
Q Consensus 582 ~~Lr~L~L~~~~~~~~~~~~~~lp~~i~~L~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~l~~~~~~~~lp~~i~~L~~L 661 (930)
..|+.|++++| .+..++ .+..+++|++|+|++|.|+.++. ++.+++|++|++++|. +..+| .+..+++|
T Consensus 46 ~~L~~L~l~~~-------~i~~l~-~l~~l~~L~~L~L~~n~i~~l~~-~~~l~~L~~L~l~~n~-i~~l~-~l~~l~~L 114 (210)
T d1h6ta2 46 NSIDQIIANNS-------DIKSVQ-GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENK-VKDLS-SLKDLKKL 114 (210)
T ss_dssp HTCCEEECTTS-------CCCCCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC-CCCGG-GGTTCTTC
T ss_pred cCccEEECcCC-------CCCCch-hHhhCCCCCEEeCCCccccCccc-cccCcccccccccccc-ccccc-cccccccc
Confidence 45666666643 233333 35666677777777776666653 5666777777777665 55555 36666677
Q ss_pred ceEeecCcccccccCCcCCCCCCCCcCCceEeCCCCCcCCCcccccccccCCCcCCeeeeecccCCCChhhhhhccccCC
Q 002362 662 RHLLNYGTISLRYMPVGIGRLTSLRTLDEFYVSGGGGIDGRKACRLESLRSLELLQVCGIRRLGNVTDVGEAKRLELDKM 741 (930)
Q Consensus 662 ~~L~l~~~~~~~~~p~~i~~l~~L~~L~~~~~~~~~~~~~~~~~~l~~L~~L~~L~~~~~~~~~~~~~~~~~~~~~l~~~ 741 (930)
+.|++++|. ...+ ..+..+++|+.+.+. ++... ... .+..+
T Consensus 115 ~~L~l~~~~-~~~~-~~l~~l~~l~~l~~~----------------------------~n~l~-~~~--------~~~~l 155 (210)
T d1h6ta2 115 KSLSLEHNG-ISDI-NGLVHLPQLESLYLG----------------------------NNKIT-DIT--------VLSRL 155 (210)
T ss_dssp CEEECTTSC-CCCC-GGGGGCTTCCEEECC----------------------------SSCCC-CCG--------GGGGC
T ss_pred ccccccccc-cccc-ccccccccccccccc----------------------------ccccc-ccc--------ccccc
Confidence 777666652 2222 223344444433321 11110 000 23456
Q ss_pred CCCCeeEEEeeCCCCCCcCCCccchHHHhhcCCCCCCcceEEEeeccCCCCCCcccccccCccEEEeeC
Q 002362 742 KNLSCLKLLFNKEEGDGQRRKNEDDQLLLEFLQPPPNLRKLLIGSYRGKTVFPPWMMSLTNLRSLDLDD 810 (930)
Q Consensus 742 ~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~p~~~~~l~~L~~L~L~~ 810 (930)
++|+.+++++|.+.+ + ..+..+++|+.|++++|.++. +| .+..+++|+.|+|++
T Consensus 156 ~~L~~l~l~~n~l~~------------i-~~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 156 TKLDTLSLEDNQISD------------I-VPLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp TTCSEEECCSSCCCC------------C-GGGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEE
T ss_pred ccccccccccccccc------------c-ccccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEccC
Confidence 678888888877654 2 235678889999999988876 65 578889999999875
No 20
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.32 E-value=3.9e-12 Score=124.15 Aligned_cols=162 Identities=21% Similarity=0.259 Sum_probs=110.6
Q ss_pred cCCcceEEEcCCcccccCCCCCcccCcccccCCCCCeeeccCCcccccccccccCCcccEEeccCCCCCccccccccccC
Q 002362 580 ESTSLRVLEFGDWARSLQLGPLTRIPRNIERLVHLRYLNLSNQSIRKLPDTLCELYNLQKLDISCCCKLKELPQGIGKLI 659 (930)
Q Consensus 580 ~~~~Lr~L~L~~~~~~~~~~~~~~lp~~i~~L~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~l~~~~~~~~lp~~i~~L~ 659 (930)
.+..++.|++++| .+..++ .+..+++|++|++++|.++.++. ++++++|++|++++|. ...+|. +..++
T Consensus 38 ~l~~l~~L~l~~~-------~i~~l~-~l~~l~nL~~L~Ls~N~l~~~~~-l~~l~~L~~L~l~~n~-~~~~~~-l~~l~ 106 (199)
T d2omxa2 38 DLDQVTTLQADRL-------GIKSID-GVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQ-IADITP-LANLT 106 (199)
T ss_dssp HHTTCCEEECTTS-------CCCCCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC-CCCCGG-GTTCT
T ss_pred HhcCCCEEECCCC-------CCCCcc-ccccCCCcCcCccccccccCccc-ccCCcccccccccccc-cccccc-ccccc
Confidence 3567888888854 344443 57778888888888888887765 7888888888888887 566664 77888
Q ss_pred CcceEeecCcccccccCCcCCCCCCCCcCCceEeCCCCCcCCCcccccccccCCCcCCeeeeecccCCCChhhhhhcccc
Q 002362 660 NMRHLLNYGTISLRYMPVGIGRLTSLRTLDEFYVSGGGGIDGRKACRLESLRSLELLQVCGIRRLGNVTDVGEAKRLELD 739 (930)
Q Consensus 660 ~L~~L~l~~~~~~~~~p~~i~~l~~L~~L~~~~~~~~~~~~~~~~~~l~~L~~L~~L~~~~~~~~~~~~~~~~~~~~~l~ 739 (930)
+|++|+++++.. ... ..+..+++|+.|++..+.... ++ .+.
T Consensus 107 ~L~~L~l~~~~~-~~~-~~~~~l~~L~~L~l~~n~l~~-----------------------------~~--------~l~ 147 (199)
T d2omxa2 107 NLTGLTLFNNQI-TDI-DPLKNLTNLNRLELSSNTISD-----------------------------IS--------ALS 147 (199)
T ss_dssp TCSEEECCSSCC-CCC-GGGTTCTTCSEEECCSSCCCC-----------------------------CG--------GGT
T ss_pred cccccccccccc-ccc-cccchhhhhHHhhhhhhhhcc-----------------------------cc--------ccc
Confidence 888888887743 222 346667777766643221100 00 234
Q ss_pred CCCCCCeeEEEeeCCCCCCcCCCccchHHHhhcCCCCCCcceEEEeeccCCCCCCcccccccCccEE
Q 002362 740 KMKNLSCLKLLFNKEEGDGQRRKNEDDQLLLEFLQPPPNLRKLLIGSYRGKTVFPPWMMSLTNLRSL 806 (930)
Q Consensus 740 ~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~p~~~~~l~~L~~L 806 (930)
.+++|+.|++.+|.++. ...+..+++|++|++++|.++. +| .+..+++|+.|
T Consensus 148 ~~~~L~~L~l~~n~l~~-------------l~~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~L 199 (199)
T d2omxa2 148 GLTSLQQLNFSSNQVTD-------------LKPLANLTTLERLDISSNKVSD-IS-VLAKLTNLESL 199 (199)
T ss_dssp TCTTCSEEECCSSCCCC-------------CGGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEE
T ss_pred ccccccccccccccccC-------------CccccCCCCCCEEECCCCCCCC-Cc-cccCCCCCCcC
Confidence 55677777777776654 1235677889999999988776 54 47788888875
No 21
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=1.1e-11 Score=125.48 Aligned_cols=195 Identities=15% Similarity=0.073 Sum_probs=128.1
Q ss_pred CCeeeccCCcccccccccccCCcccEEeccCCCCCccccc-cccccCCcceEeecCcccccccCC-cCCCCCCCCcCCce
Q 002362 614 LRYLNLSNQSIRKLPDTLCELYNLQKLDISCCCKLKELPQ-GIGKLINMRHLLNYGTISLRYMPV-GIGRLTSLRTLDEF 691 (930)
Q Consensus 614 Lr~L~L~~~~i~~lp~~i~~L~~L~~L~l~~~~~~~~lp~-~i~~L~~L~~L~l~~~~~~~~~p~-~i~~l~~L~~L~~~ 691 (930)
.+.++.+++.++.+|..+. .++++|++++|. +..+|. .|.++++|++|++++|.....+|. .+..++++++|...
T Consensus 10 ~~~i~c~~~~l~~iP~~l~--~~l~~L~Ls~n~-i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~ 86 (242)
T d1xwdc1 10 NRVFLCQESKVTEIPSDLP--RNAIELRFVLTK-LRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 86 (242)
T ss_dssp SSEEEEESCSCSSCCSCSC--SCCSEEEEESCC-CCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEE
T ss_pred CCEEEEeCCCCCCcCCCCC--CCCCEEECcCCc-CCccChhHhhccchhhhhhhccccccceeecccccccccccccccc
Confidence 4688888889999998763 689999999998 778876 579999999999999965555543 46778888888654
Q ss_pred EeCCCCCcCCCcccccccccCCCcCCeeeeecccCCCChhhhhhccccCCCCCCeeEE---EeeCCCCCCcCCCccchHH
Q 002362 692 YVSGGGGIDGRKACRLESLRSLELLQVCGIRRLGNVTDVGEAKRLELDKMKNLSCLKL---LFNKEEGDGQRRKNEDDQL 768 (930)
Q Consensus 692 ~~~~~~~~~~~~~~~l~~L~~L~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~L---~~~~~~~~~~~~~~~~~~~ 768 (930)
...... ...+..+..+++|+.|++.++.... .+. +..+.+++.+.. ..+.+...
T Consensus 87 ~~n~l~---~~~~~~~~~l~~L~~l~l~~~~l~~-~~~--------~~~~~~l~~l~~~~~~n~~l~~i----------- 143 (242)
T d1xwdc1 87 KANNLL---YINPEAFQNLPNLQYLLISNTGIKH-LPD--------VHKIHSLQKVLLDIQDNINIHTI----------- 143 (242)
T ss_dssp CCTTCC---EECTTSEECCTTCCEEEEESCCCCS-CCC--------CTTTCBSSCEEEEEESCTTCCEE-----------
T ss_pred cccccc---ccccccccccccccccccchhhhcc-ccc--------ccccccccccccccccccccccc-----------
Confidence 332221 1223456677777777766654322 211 223344444433 33222210
Q ss_pred HhhcCC-CCCCcceEEEeeccCCCCCCcccccccCccEEEeeCCCCCCCCCC--CCCCCCcceeeeccCc
Q 002362 769 LLEFLQ-PPPNLRKLLIGSYRGKTVFPPWMMSLTNLRSLDLDDCENCEKLPP--LGKLPSLEKLSISFMC 835 (930)
Q Consensus 769 ~~~~l~-~~~~L~~L~l~~~~~~~~~p~~~~~l~~L~~L~L~~~~~~~~l~~--l~~l~~L~~L~L~~~~ 835 (930)
-...+. ....++.|.+.+|.+.. ++....+.+++..+....+...+.+|. +..+++|++|+|+++.
T Consensus 144 ~~~~~~~~~~~l~~L~l~~n~l~~-i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~ 212 (242)
T d1xwdc1 144 ERNSFVGLSFESVILWLNKNGIQE-IHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTR 212 (242)
T ss_dssp CTTSSTTSBSSCEEEECCSSCCCE-ECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSC
T ss_pred cccccccccccceeeecccccccc-cccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCc
Confidence 011222 24578889999888876 666666667777776554444555655 8889999999998654
No 22
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.22 E-value=2.8e-12 Score=132.78 Aligned_cols=187 Identities=19% Similarity=0.166 Sum_probs=104.4
Q ss_pred cccCCCCCeeeccCCccc--ccccccccCCcccEEeccCCCCCccccccccccCCcceEeecCcccccc--cCCcCCCCC
Q 002362 608 IERLVHLRYLNLSNQSIR--KLPDTLCELYNLQKLDISCCCKLKELPQGIGKLINMRHLLNYGTISLRY--MPVGIGRLT 683 (930)
Q Consensus 608 i~~L~~Lr~L~L~~~~i~--~lp~~i~~L~~L~~L~l~~~~~~~~lp~~i~~L~~L~~L~l~~~~~~~~--~p~~i~~l~ 683 (930)
......|++||+++|.+. .++..+..+++|++|++++|......+..+.++++|++|++++|..++. +..-...++
T Consensus 42 ~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~ 121 (284)
T d2astb2 42 HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCS 121 (284)
T ss_dssp CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCT
T ss_pred hccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHH
Confidence 345568899999988775 3556677888999999998875556667778888888888888744321 111112334
Q ss_pred CCCcCCceEeCCCCCcCCCcccccccccCCCcCCeeeeecccCCCChhhhhhccccCCCCCCeeEEEeeCCCCCCcCCCc
Q 002362 684 SLRTLDEFYVSGGGGIDGRKACRLESLRSLELLQVCGIRRLGNVTDVGEAKRLELDKMKNLSCLKLLFNKEEGDGQRRKN 763 (930)
Q Consensus 684 ~L~~L~~~~~~~~~~~~~~~~~~l~~L~~L~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~L~~~~~~~~~~~~~~ 763 (930)
+|++|++. ++... .+ ...........++|+.|+++++...
T Consensus 122 ~L~~L~ls----------------------------~c~~~---~~-~~~~~~~~~~~~~L~~L~l~~~~~~-------- 161 (284)
T d2astb2 122 RLDELNLS----------------------------WCFDF---TE-KHVQVAVAHVSETITQLNLSGYRKN-------- 161 (284)
T ss_dssp TCCEEECC----------------------------CCTTC---CH-HHHHHHHHHSCTTCCEEECCSCGGG--------
T ss_pred hccccccc----------------------------ccccc---cc-ccchhhhcccccccchhhhcccccc--------
Confidence 44444332 21110 00 0000001112356677766543110
Q ss_pred cchHHHhhcCCCCCCcceEEEeecc-CCCCCCcccccccCccEEEeeCCCCCCC--CCCCCCCCCcceeeeccC
Q 002362 764 EDDQLLLEFLQPPPNLRKLLIGSYR-GKTVFPPWMMSLTNLRSLDLDDCENCEK--LPPLGKLPSLEKLSISFM 834 (930)
Q Consensus 764 ~~~~~~~~~l~~~~~L~~L~l~~~~-~~~~~p~~~~~l~~L~~L~L~~~~~~~~--l~~l~~l~~L~~L~L~~~ 834 (930)
..+..+......+++|++|++++|. ++...+..+..+++|++|+|++|...++ +..++++|+|+.|++.+|
T Consensus 162 i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 162 LQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp SCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred cccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 0112233333446677777777654 3323345556677777777777654332 223667777777777654
No 23
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.18 E-value=2.9e-12 Score=132.65 Aligned_cols=183 Identities=16% Similarity=0.126 Sum_probs=118.6
Q ss_pred CCeeeccCCcccccccccccCCcccEEeccCCCCCc-cccccccccCCcceEeecCcccccccCCcCCCCCCCCcCCceE
Q 002362 614 LRYLNLSNQSIRKLPDTLCELYNLQKLDISCCCKLK-ELPQGIGKLINMRHLLNYGTISLRYMPVGIGRLTSLRTLDEFY 692 (930)
Q Consensus 614 Lr~L~L~~~~i~~lp~~i~~L~~L~~L~l~~~~~~~-~lp~~i~~L~~L~~L~l~~~~~~~~~p~~i~~l~~L~~L~~~~ 692 (930)
+..+.++.+.+...........+|++||+++|.... .++..+.++++|++|++.+|......+..++++++|++|++.+
T Consensus 25 ~~~lrl~~~~~~~~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~ 104 (284)
T d2astb2 25 VIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSG 104 (284)
T ss_dssp CSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTT
T ss_pred ceEeeccccccccchhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccc
Confidence 455666665554433445567799999999987433 3555678899999999999854445556677777777776432
Q ss_pred eCCCCCcCCCcccccccccCCCcCCeeeeecccCCCChhhhhhccccCCCCCCeeEEEeeCCCCCCcCCCccchHHHhhc
Q 002362 693 VSGGGGIDGRKACRLESLRSLELLQVCGIRRLGNVTDVGEAKRLELDKMKNLSCLKLLFNKEEGDGQRRKNEDDQLLLEF 772 (930)
Q Consensus 693 ~~~~~~~~~~~~~~l~~L~~L~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~ 772 (930)
+.. +.+ +........+++|++|+++++..-. +..+...
T Consensus 105 c~~-------------------------------itd--~~l~~l~~~~~~L~~L~ls~c~~~~---------~~~~~~~ 142 (284)
T d2astb2 105 CSG-------------------------------FSE--FALQTLLSSCSRLDELNLSWCFDFT---------EKHVQVA 142 (284)
T ss_dssp CBS-------------------------------CCH--HHHHHHHHHCTTCCEEECCCCTTCC---------HHHHHHH
T ss_pred ccc-------------------------------ccc--cccchhhHHHHhccccccccccccc---------cccchhh
Confidence 111 000 1111123467899999999864321 1112222
Q ss_pred C-CCCCCcceEEEeeccC--CC-CCCcccccccCccEEEeeCCCCCC--CCCCCCCCCCcceeeeccCcCce
Q 002362 773 L-QPPPNLRKLLIGSYRG--KT-VFPPWMMSLTNLRSLDLDDCENCE--KLPPLGKLPSLEKLSISFMCSVK 838 (930)
Q Consensus 773 l-~~~~~L~~L~l~~~~~--~~-~~p~~~~~l~~L~~L~L~~~~~~~--~l~~l~~l~~L~~L~L~~~~~l~ 838 (930)
+ ..+++|+.|+++++.. .. .+.....++++|++|+|++|...+ .+..++++|+|++|+|++|..++
T Consensus 143 ~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~ 214 (284)
T d2astb2 143 VAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDII 214 (284)
T ss_dssp HHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCC
T ss_pred hcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCC
Confidence 2 2357899999998632 11 122333478999999999987544 34458899999999999987653
No 24
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.16 E-value=1.3e-11 Score=109.29 Aligned_cols=95 Identities=26% Similarity=0.334 Sum_probs=57.2
Q ss_pred eEEEcCCcccccCCCCCcccCcccccCCCCCeeeccCCcccccccccccCCcccEEeccCCCCCccccccccccCCcceE
Q 002362 585 RVLEFGDWARSLQLGPLTRIPRNIERLVHLRYLNLSNQSIRKLPDTLCELYNLQKLDISCCCKLKELPQGIGKLINMRHL 664 (930)
Q Consensus 585 r~L~L~~~~~~~~~~~~~~lp~~i~~L~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~l~~~~~~~~lp~~i~~L~~L~~L 664 (930)
|+|+|++| .++.+| .++++.+|++|++++|.|+.+|..++.+++|++|++++|. +..+|. +..+++|++|
T Consensus 1 R~L~Ls~n-------~l~~l~-~l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~-i~~l~~-~~~l~~L~~L 70 (124)
T d1dcea3 1 RVLHLAHK-------DLTVLC-HLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNA-LENVDG-VANLPRLQEL 70 (124)
T ss_dssp SEEECTTS-------CCSSCC-CGGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSC-CCCCGG-GTTCSSCCEE
T ss_pred CEEEcCCC-------CCCCCc-ccccCCCCCEEECCCCccCcchhhhhhhhccccccccccc-ccccCc-cccccccCeE
Confidence 56666643 344444 3666667777777777777776666667777777777665 555553 6666777777
Q ss_pred eecCcccccccC--CcCCCCCCCCcCCc
Q 002362 665 LNYGTISLRYMP--VGIGRLTSLRTLDE 690 (930)
Q Consensus 665 ~l~~~~~~~~~p--~~i~~l~~L~~L~~ 690 (930)
++++| .+..+| ..++.+++|+.|++
T Consensus 71 ~l~~N-~i~~~~~~~~l~~~~~L~~L~l 97 (124)
T d1dcea3 71 LLCNN-RLQQSAAIQPLVSCPRLVLLNL 97 (124)
T ss_dssp ECCSS-CCCSSSTTGGGGGCTTCCEEEC
T ss_pred ECCCC-ccCCCCCchhhcCCCCCCEEEC
Confidence 77666 333333 23455555555554
No 25
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.13 E-value=1.3e-10 Score=120.13 Aligned_cols=198 Identities=12% Similarity=0.161 Sum_probs=115.7
Q ss_pred cCCceecchhhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeC-----CCccHH
Q 002362 168 DEEEICGRVDEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVS-----ETFEEF 242 (930)
Q Consensus 168 ~~~~~vGr~~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs-----~~~~~~ 242 (930)
..+.|+||+++++++.+. ..+++.|+|++|+|||+|++++.+. ... ...|+.+. ......
T Consensus 10 ~~~~f~GR~~el~~l~~~----------~~~~i~i~G~~G~GKTsLl~~~~~~--~~~---~~~~i~~~~~~~~~~~~~~ 74 (283)
T d2fnaa2 10 NRKDFFDREKEIEKLKGL----------RAPITLVLGLRRTGKSSIIKIGINE--LNL---PYIYLDLRKFEERNYISYK 74 (283)
T ss_dssp SGGGSCCCHHHHHHHHHT----------CSSEEEEEESTTSSHHHHHHHHHHH--HTC---CEEEEEGGGGTTCSCCCHH
T ss_pred ChhhCCChHHHHHHHHhc----------cCCEEEEEcCCCCcHHHHHHHHHHH--CCC---CeEEEEeccccccccccHH
Confidence 357899999999998763 2257899999999999999998763 222 34555542 222334
Q ss_pred HHHHHHHHHhc--------------C---------------CCCCCccHHHHHHHHHHHhcCceEEEEEeCccccCc---
Q 002362 243 RVAKAIVEALD--------------G---------------HESRLGEFQSLIKHIYESVAGMCFLLVLDDVWDGNY--- 290 (930)
Q Consensus 243 ~~~~~i~~~l~--------------~---------------~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~--- 290 (930)
.+...+..... . ......++.++...+. ...++++++|+|++..-..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~~~i~id~~~~~~~~~~ 153 (283)
T d2fnaa2 75 DFLLELQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFE-QASKDNVIIVLDEAQELVKLRG 153 (283)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC-----CCCHHHHHHHHH-HTCSSCEEEEEETGGGGGGCTT
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHhhhcccccccccccccchhhhhHHHHHHHHHH-hhcccccccccchhhhhcccch
Confidence 44444433321 0 0011223333433332 3457889999999854211
Q ss_pred cCh-hhhhhhhccCCCCcEEEEEcCChHHHhhhC------------CcceEeCCCCChHHHHHHHHHHHcCCCCchhhHH
Q 002362 291 MKW-EPFFHCLKNGLHRSKILVTTRKKSVASMMG------------STNIISIKELTEEECRLLFNKIAFSDRPIEEREK 357 (930)
Q Consensus 291 ~~~-~~l~~~l~~~~~gs~iivTtr~~~v~~~~~------------~~~~~~l~~L~~~~~~~lf~~~~~~~~~~~~~~~ 357 (930)
..+ ..+.... ........+++++.......+. ....+.|.+++.+++.+++.+.+-..... .++
T Consensus 154 ~~~~~~l~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~l~~~e~~~~l~~~~~~~~~~--~~~ 230 (283)
T d2fnaa2 154 VNLLPALAYAY-DNLKRIKFIMSGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFLRRGFQEADID--FKD 230 (283)
T ss_dssp CCCHHHHHHHH-HHCTTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHHHHHHHHHTCC--CCC
T ss_pred HHHHHHHHHHH-HhhhhhhhhhccccchHHHHHHHhhhhcchhcccceeEEeeCCCCHHHHHHHHHhhhhhcCCC--HHH
Confidence 111 1222222 2233445555555543322211 13468899999999999998754221111 111
Q ss_pred HHHHHHHHHHHcCCchhHHHHHHhhhcCCCC
Q 002362 358 LEQIGRKIANKCKGLPLAAKIIGSLMRSKET 388 (930)
Q Consensus 358 l~~~~~~i~~~c~glPLai~~~~~~l~~~~~ 388 (930)
..+|++.++|.|..+..++..+.....
T Consensus 231 ----~~~i~~~~~G~P~~L~~~~~~~~~~~~ 257 (283)
T d2fnaa2 231 ----YEVVYEKIGGIPGWLTYFGFIYLDNKN 257 (283)
T ss_dssp ----HHHHHHHHCSCHHHHHHHHHHHHHHCC
T ss_pred ----HHHHHHHhCCCHHHHHHHHHHHHhccc
Confidence 568999999999999999876654433
No 26
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.11 E-value=6.7e-11 Score=110.30 Aligned_cols=127 Identities=20% Similarity=0.188 Sum_probs=75.2
Q ss_pred ccCCCCccEEEEccccccccchhhhHHHHHhhcCCcceEEEcCCcccccCCCCCcccCcccccCCCCCeeeccCCccccc
Q 002362 548 TCGVKRMRSLIIDYSRYFHLYLNGKILERLFRESTSLRVLEFGDWARSLQLGPLTRIPRNIERLVHLRYLNLSNQSIRKL 627 (930)
Q Consensus 548 ~~~~~~Lr~L~l~~~~~~~~~~~~~~~~~~~~~~~~Lr~L~L~~~~~~~~~~~~~~lp~~i~~L~~Lr~L~L~~~~i~~l 627 (930)
+.++.++|.|++.++.+... +..+..+++|++|+|++| .+..++ .+..+++|++|++++|.++.+
T Consensus 14 ~~n~~~lr~L~L~~n~I~~i-------~~~~~~l~~L~~L~Ls~N-------~i~~l~-~~~~l~~L~~L~ls~N~i~~l 78 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPVI-------ENLGATLDQFDAIDFSDN-------EIRKLD-GFPLLRRLKTLLVNNNRICRI 78 (162)
T ss_dssp EECTTSCEEEECTTSCCCSC-------CCGGGGTTCCSEEECCSS-------CCCEEC-CCCCCSSCCEEECCSSCCCEE
T ss_pred ccCcCcCcEEECCCCCCCcc-------CccccccccCCEEECCCC-------CCCccC-CcccCcchhhhhcccccccCC
Confidence 34555677777777654322 223455667777777744 344443 466677777777777777766
Q ss_pred cccc-ccCCcccEEeccCCCCCccccc--cccccCCcceEeecCcccccccCC----cCCCCCCCCcCCce
Q 002362 628 PDTL-CELYNLQKLDISCCCKLKELPQ--GIGKLINMRHLLNYGTISLRYMPV----GIGRLTSLRTLDEF 691 (930)
Q Consensus 628 p~~i-~~L~~L~~L~l~~~~~~~~lp~--~i~~L~~L~~L~l~~~~~~~~~p~----~i~~l~~L~~L~~~ 691 (930)
|..+ ..+++|++|++++|. +..++. .+..+++|++|++++|+ +...|. .++.+++|+.|+..
T Consensus 79 ~~~~~~~l~~L~~L~L~~N~-i~~~~~l~~l~~l~~L~~L~l~~N~-i~~~~~~r~~~i~~lp~L~~LD~~ 147 (162)
T d1a9na_ 79 GEGLDQALPDLTELILTNNS-LVELGDLDPLASLKSLTYLCILRNP-VTNKKHYRLYVIYKVPQVRVLDFQ 147 (162)
T ss_dssp CSCHHHHCTTCCEEECCSCC-CCCGGGGGGGGGCTTCCEEECCSSG-GGGSTTHHHHHHHHCTTCSEETTE
T ss_pred Cccccccccccccceecccc-ccccccccccccccccchhhcCCCc-cccccchHHHHHHHCCCcCeeCCC
Confidence 6543 457777777777776 555543 45666777777777763 334442 24555566655543
No 27
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.07 E-value=2.2e-10 Score=101.27 Aligned_cols=99 Identities=18% Similarity=0.177 Sum_probs=83.2
Q ss_pred cEEEEccccccccchhhhHHHHHhhcCCcceEEEcCCcccccCCCCCcccCcccccCCCCCeeeccCCcccccccccccC
Q 002362 555 RSLIIDYSRYFHLYLNGKILERLFRESTSLRVLEFGDWARSLQLGPLTRIPRNIERLVHLRYLNLSNQSIRKLPDTLCEL 634 (930)
Q Consensus 555 r~L~l~~~~~~~~~~~~~~~~~~~~~~~~Lr~L~L~~~~~~~~~~~~~~lp~~i~~L~~Lr~L~L~~~~i~~lp~~i~~L 634 (930)
|.|+++++.+... +. +..++.|++|++++| .+..+|..++.+++|++|++++|.|+.+|. ++++
T Consensus 1 R~L~Ls~n~l~~l-------~~-l~~l~~L~~L~ls~N-------~l~~lp~~~~~l~~L~~L~l~~N~i~~l~~-~~~l 64 (124)
T d1dcea3 1 RVLHLAHKDLTVL-------CH-LEQLLLVTHLDLSHN-------RLRALPPALAALRCLEVLQASDNALENVDG-VANL 64 (124)
T ss_dssp SEEECTTSCCSSC-------CC-GGGGTTCCEEECCSS-------CCCCCCGGGGGCTTCCEEECCSSCCCCCGG-GTTC
T ss_pred CEEEcCCCCCCCC-------cc-cccCCCCCEEECCCC-------ccCcchhhhhhhhcccccccccccccccCc-cccc
Confidence 5788888875432 22 678899999999954 577889899999999999999999999974 8999
Q ss_pred CcccEEeccCCCCCcccc--ccccccCCcceEeecCcc
Q 002362 635 YNLQKLDISCCCKLKELP--QGIGKLINMRHLLNYGTI 670 (930)
Q Consensus 635 ~~L~~L~l~~~~~~~~lp--~~i~~L~~L~~L~l~~~~ 670 (930)
++|++|++++|. +..+| ..+..+++|++|++++|+
T Consensus 65 ~~L~~L~l~~N~-i~~~~~~~~l~~~~~L~~L~l~~N~ 101 (124)
T d1dcea3 65 PRLQELLLCNNR-LQQSAAIQPLVSCPRLVLLNLQGNS 101 (124)
T ss_dssp SSCCEEECCSSC-CCSSSTTGGGGGCTTCCEEECTTSG
T ss_pred cccCeEECCCCc-cCCCCCchhhcCCCCCCEEECCCCc
Confidence 999999999998 66665 457899999999999984
No 28
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.03 E-value=1e-10 Score=109.12 Aligned_cols=107 Identities=20% Similarity=0.223 Sum_probs=85.8
Q ss_pred hhcCCcceEEEcCCcccccCCCCCcccCcccccCCCCCeeeccCCcccccccccccCCcccEEeccCCCCCccccccc-c
Q 002362 578 FRESTSLRVLEFGDWARSLQLGPLTRIPRNIERLVHLRYLNLSNQSIRKLPDTLCELYNLQKLDISCCCKLKELPQGI-G 656 (930)
Q Consensus 578 ~~~~~~Lr~L~L~~~~~~~~~~~~~~lp~~i~~L~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~l~~~~~~~~lp~~i-~ 656 (930)
|.++..||.|||++| .+..+|..+..+.+|++|+|++|.|+.++ .+..+++|++|++++|. +..+|..+ .
T Consensus 14 ~~n~~~lr~L~L~~n-------~I~~i~~~~~~l~~L~~L~Ls~N~i~~l~-~~~~l~~L~~L~ls~N~-i~~l~~~~~~ 84 (162)
T d1a9na_ 14 YTNAVRDRELDLRGY-------KIPVIENLGATLDQFDAIDFSDNEIRKLD-GFPLLRRLKTLLVNNNR-ICRIGEGLDQ 84 (162)
T ss_dssp EECTTSCEEEECTTS-------CCCSCCCGGGGTTCCSEEECCSSCCCEEC-CCCCCSSCCEEECCSSC-CCEECSCHHH
T ss_pred ccCcCcCcEEECCCC-------CCCccCccccccccCCEEECCCCCCCccC-CcccCcchhhhhccccc-ccCCCccccc
Confidence 456778999999955 56667766778999999999999999985 58899999999999998 77777654 6
Q ss_pred ccCCcceEeecCcccccccC--CcCCCCCCCCcCCceEeC
Q 002362 657 KLINMRHLLNYGTISLRYMP--VGIGRLTSLRTLDEFYVS 694 (930)
Q Consensus 657 ~L~~L~~L~l~~~~~~~~~p--~~i~~l~~L~~L~~~~~~ 694 (930)
.+++|++|++++| .+..++ ..+..+++|++|++.++.
T Consensus 85 ~l~~L~~L~L~~N-~i~~~~~l~~l~~l~~L~~L~l~~N~ 123 (162)
T d1a9na_ 85 ALPDLTELILTNN-SLVELGDLDPLASLKSLTYLCILRNP 123 (162)
T ss_dssp HCTTCCEEECCSC-CCCCGGGGGGGGGCTTCCEEECCSSG
T ss_pred cccccccceeccc-cccccccccccccccccchhhcCCCc
Confidence 7999999999998 445554 346677788877765543
No 29
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.93 E-value=2.5e-11 Score=135.48 Aligned_cols=154 Identities=21% Similarity=0.160 Sum_probs=74.7
Q ss_pred cCCCCCCeeEEEeeCCCCCCcCCCccchHHHhhcCCCCCCcceEEEeeccCCCC----CCcccccccCccEEEeeCCCCC
Q 002362 739 DKMKNLSCLKLLFNKEEGDGQRRKNEDDQLLLEFLQPPPNLRKLLIGSYRGKTV----FPPWMMSLTNLRSLDLDDCENC 814 (930)
Q Consensus 739 ~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~----~p~~~~~l~~L~~L~L~~~~~~ 814 (930)
.....++.+.+..|..... ...............++.|++++|.+... ...++...+.++.+++++|.+.
T Consensus 223 ~~~~~~~~l~~~~n~~~~~------~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~ 296 (460)
T d1z7xw1 223 ASKASLRELALGSNKLGDV------GMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELG 296 (460)
T ss_dssp HHCTTCCEEECCSSBCHHH------HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCH
T ss_pred cccccccccchhhcccccc------ccchhhccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3445666666665543210 01112233344566777777777665431 1122334566777777766543
Q ss_pred CC----CCC--CCCCCCcceeeeccCcCceEeCCccccCc-ccccCccccceeeccc----------------cccccce
Q 002362 815 EK----LPP--LGKLPSLEKLSISFMCSVKRVDNEILGIE-ITIAFPKLKSLTISWI----------------IMPRLSS 871 (930)
Q Consensus 815 ~~----l~~--l~~l~~L~~L~L~~~~~l~~~~~~~~~~~-~~~~f~~L~~L~l~~~----------------~lp~L~~ 871 (930)
.. +.. ....+.|+.+.+++|. +.. ....... .....++|++|+++++ ..+.|+.
T Consensus 297 ~~~~~~l~~~l~~~~~~L~~l~l~~~~-l~~--~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~ 373 (460)
T d1z7xw1 297 DEGARLLCETLLEPGCQLESLWVKSCS-FTA--ACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRV 373 (460)
T ss_dssp HHHHHHHHHHHTSTTCCCCEEECTTSC-CBG--GGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCE
T ss_pred ccccchhhccccccccccccccccccc-hhh--hhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCE
Confidence 21 000 1123456666666543 110 0000000 0013456677766665 1234777
Q ss_pred eeeccCCccCC-----CCCCCCCCCCccEEEEecCc
Q 002362 872 LTFDSCPKLKA-----LPDHFHQTTTLKEFNIGWNC 902 (930)
Q Consensus 872 L~l~~c~~L~~-----lp~~l~~l~~L~~L~l~~nc 902 (930)
|++++| .+.. ++..+..+++|++|+|++|.
T Consensus 374 L~Ls~n-~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~ 408 (460)
T d1z7xw1 374 LWLADC-DVSDSSCSSLAATLLANHSLRELDLSNNC 408 (460)
T ss_dssp EECTTS-CCCHHHHHHHHHHHHHCCCCCEEECCSSS
T ss_pred EECCCC-CCChHHHHHHHHHHhcCCCCCEEECCCCc
Confidence 777777 3432 33344556777777777764
No 30
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.83 E-value=4.9e-11 Score=115.50 Aligned_cols=107 Identities=20% Similarity=0.208 Sum_probs=54.3
Q ss_pred ccccCCCCccEEEEccccccccchhhhHHHHHhhcCCcceEEEcCCcccccCCCCCcccCcccccCCCCCeeeccCCccc
Q 002362 546 VSTCGVKRMRSLIIDYSRYFHLYLNGKILERLFRESTSLRVLEFGDWARSLQLGPLTRIPRNIERLVHLRYLNLSNQSIR 625 (930)
Q Consensus 546 ~~~~~~~~Lr~L~l~~~~~~~~~~~~~~~~~~~~~~~~Lr~L~L~~~~~~~~~~~~~~lp~~i~~L~~Lr~L~L~~~~i~ 625 (930)
..+..+++|+.|+++++.+.+. + .+.++++|++|+|++| .+..+|..+..+..|++|++++|.|+
T Consensus 42 ~sl~~L~~L~~L~Ls~n~I~~i-------~-~l~~l~~L~~L~Ls~N-------~i~~i~~~~~~~~~L~~L~l~~N~i~ 106 (198)
T d1m9la_ 42 ATLSTLKACKHLALSTNNIEKI-------S-SLSGMENLRILSLGRN-------LIKKIENLDAVADTLEELWISYNQIA 106 (198)
T ss_dssp HHHHHTTTCCEEECSEEEESCC-------C-CHHHHTTCCEEECCEE-------EECSCSSHHHHHHHCCEEECSEEECC
T ss_pred hHHhcccccceeECcccCCCCc-------c-cccCCccccChhhccc-------cccccccccccccccccccccccccc
Confidence 3444555566666655543221 1 1444555666666533 23334433344445566666666555
Q ss_pred ccccccccCCcccEEeccCCCCCcccc--ccccccCCcceEeecCc
Q 002362 626 KLPDTLCELYNLQKLDISCCCKLKELP--QGIGKLINMRHLLNYGT 669 (930)
Q Consensus 626 ~lp~~i~~L~~L~~L~l~~~~~~~~lp--~~i~~L~~L~~L~l~~~ 669 (930)
.++ .+..+++|++|++++|. +..++ ..+..+++|++|++++|
T Consensus 107 ~l~-~~~~l~~L~~L~L~~N~-i~~~~~~~~l~~l~~L~~L~L~~N 150 (198)
T d1m9la_ 107 SLS-GIEKLVNLRVLYMSNNK-ITNWGEIDKLAALDKLEDLLLAGN 150 (198)
T ss_dssp CHH-HHHHHHHSSEEEESEEE-CCCHHHHHHHTTTTTCSEEEECSS
T ss_pred ccc-cccccccccccccccch-hccccccccccCCCccceeecCCC
Confidence 543 24555566666666554 44443 23455556666666555
No 31
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=98.81 E-value=8.9e-08 Score=97.86 Aligned_cols=176 Identities=15% Similarity=0.116 Sum_probs=113.2
Q ss_pred CCceecchhhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCC-eEEEEEeCCCccHHHHHHH
Q 002362 169 EEEICGRVDEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFD-KILWVCVSETFEEFRVAKA 247 (930)
Q Consensus 169 ~~~~vGr~~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~-~~~wv~vs~~~~~~~~~~~ 247 (930)
+..++||+.++++|.++|...-.+.+...+.+.|+|++|+||||+|+.+++ .....+. ..+|+..............
T Consensus 15 p~~l~~Re~ei~~l~~~l~~~l~~~~~~~~~lll~GppGtGKT~l~~~l~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (276)
T d1fnna2 15 PKRLPHREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWE--LYKDKTTARFVYINGFIYRNFTAIIGE 92 (276)
T ss_dssp CSCCTTCHHHHHHHHHHHHHHHHSTTSSCCEEEEECCTTSSHHHHHHHHHH--HHTTSCCCEEEEEETTTCCSHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCCCCCCceEEECCCCCCHHHHHHHHHH--HHhcccCCcEEEecchhhhhhhhhhhh
Confidence 346899999999999988642110023567899999999999999999998 4444443 4567777777888888888
Q ss_pred HHHHhcCCCCC-CccHHHHHHHHHHHh--cCceEEEEEeCccccCccChhhhhhhh---cc-CCCCcEEEEEcCChHHHh
Q 002362 248 IVEALDGHESR-LGEFQSLIKHIYESV--AGMCFLLVLDDVWDGNYMKWEPFFHCL---KN-GLHRSKILVTTRKKSVAS 320 (930)
Q Consensus 248 i~~~l~~~~~~-~~~~~~~~~~l~~~l--~~kr~LlVlDdv~~~~~~~~~~l~~~l---~~-~~~gs~iivTtr~~~v~~ 320 (930)
+....+..... ..........+.+.+ ......+++|+++.............+ .. ......+|.++.......
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 172 (276)
T d1fnna2 93 IARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEADKLGAFRIALVIVGHNDAVLN 172 (276)
T ss_dssp HHHHTTCCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSCHHHHHHHHHHTTCHHHHSSCCEEEEEEESSTHHHH
T ss_pred hHHhhhhhhhhhccchhHHHHHHHHHHhhcccccccchhHHHHhhhhhhhhHHHHHhccccccccceEEeecCCchhhhh
Confidence 88887654332 334455555555544 345677888888764432222222111 11 222334555555543322
Q ss_pred hh-------CCcceEeCCCCChHHHHHHHHHHH
Q 002362 321 MM-------GSTNIISIKELTEEECRLLFNKIA 346 (930)
Q Consensus 321 ~~-------~~~~~~~l~~L~~~~~~~lf~~~~ 346 (930)
.+ .....+.+.+.+.++.++++.+++
T Consensus 173 ~~~~~~~~r~~~~~i~~~~~~~~e~~~il~~r~ 205 (276)
T d1fnna2 173 NLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRA 205 (276)
T ss_dssp TSCHHHHHHHTTCEEECCCCBHHHHHHHHHHHH
T ss_pred hcchhhhhhhcchhccccchhHHHHHHHHHHHH
Confidence 21 113468899999999999998765
No 32
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.79 E-value=1.5e-11 Score=137.27 Aligned_cols=357 Identities=15% Similarity=0.037 Sum_probs=170.4
Q ss_pred ceeEEEEEecCCcc--ccccccCCCCccEEEEccccccccchhhhHHHHHhhcCCcceEEEcCCcccccCCCCCcccCcc
Q 002362 530 KVRHLLLIVGNGAS--FPVSTCGVKRMRSLIIDYSRYFHLYLNGKILERLFRESTSLRVLEFGDWARSLQLGPLTRIPRN 607 (930)
Q Consensus 530 ~~r~l~l~~~~~~~--~~~~~~~~~~Lr~L~l~~~~~~~~~~~~~~~~~~~~~~~~Lr~L~L~~~~~~~~~~~~~~lp~~ 607 (930)
+++.|.+..+.+.+ +..-+..++++++|.+.+|.+.+. ....+...+..++.|+.|||++|... +..+..+...
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~--~~~~l~~~L~~~~~L~~LdLs~N~i~--~~~~~~l~~~ 78 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEA--RCKDISSALRVNPALAELNLRSNELG--DVGVHCVLQG 78 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHH--HHHHHHHHHHTCTTCCEEECTTCCCH--HHHHHHHHHT
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHH--HHHHHHHHHhcCCCCCEEECcCCcCC--hHHHHHHHHH
Confidence 45667777776653 123345577888888888864321 11234455678888888888865422 0011122233
Q ss_pred cc-cCCCCCeeeccCCcccc-----cccccccCCcccEEeccCCCCCcc----ccccc----------------------
Q 002362 608 IE-RLVHLRYLNLSNQSIRK-----LPDTLCELYNLQKLDISCCCKLKE----LPQGI---------------------- 655 (930)
Q Consensus 608 i~-~L~~Lr~L~L~~~~i~~-----lp~~i~~L~~L~~L~l~~~~~~~~----lp~~i---------------------- 655 (930)
+. ....|++|+|++|.++. ++..+..+++|++|++++|..... ++..+
T Consensus 79 l~~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 158 (460)
T d1z7xw1 79 LQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASC 158 (460)
T ss_dssp TCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGH
T ss_pred HhcCCCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccchhhh
Confidence 32 22468888888888763 456677788888888888762111 11111
Q ss_pred -------cccCCcceEeecCcccccc----cCCcC-CCCCCCCcCCceEeCCCCCcCCCcccccccccCCCcCCeeeeec
Q 002362 656 -------GKLINMRHLLNYGTISLRY----MPVGI-GRLTSLRTLDEFYVSGGGGIDGRKACRLESLRSLELLQVCGIRR 723 (930)
Q Consensus 656 -------~~L~~L~~L~l~~~~~~~~----~p~~i-~~l~~L~~L~~~~~~~~~~~~~~~~~~l~~L~~L~~L~~~~~~~ 723 (930)
.....++.+.++++..... ....+ ..-.....+....+.............+.....++.+....+..
T Consensus 159 ~~~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~ 238 (460)
T d1z7xw1 159 EPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKL 238 (460)
T ss_dssp HHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBC
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhhccc
Confidence 1112333333333211000 00000 00001111111100000000000000111222233222222211
Q ss_pred ccCCCChhhhhhccccCCCCCCeeEEEeeCCCCCCcCCCccchHHHhhcCCCCCCcceEEEeeccCCCCCCccc----c-
Q 002362 724 LGNVTDVGEAKRLELDKMKNLSCLKLLFNKEEGDGQRRKNEDDQLLLEFLQPPPNLRKLLIGSYRGKTVFPPWM----M- 798 (930)
Q Consensus 724 ~~~~~~~~~~~~~~l~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~p~~~----~- 798 (930)
... ...............++.++++.|.+... ........+...+.++.+++++|.+.......+ .
T Consensus 239 ~~~--~~~~~~~~~~~~~~~l~~l~l~~n~i~~~-------~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~ 309 (460)
T d1z7xw1 239 GDV--GMAELCPGLLHPSSRLRTLWIWECGITAK-------GCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLE 309 (460)
T ss_dssp HHH--HHHHHHHHHTSTTCCCCEEECTTSCCCHH-------HHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTS
T ss_pred ccc--ccchhhccccccccccccccccccccccc-------ccccccccccccccccccccccccccccccchhhccccc
Confidence 000 01111222344567888888887765431 112233344556778888887776532101111 1
Q ss_pred cccCccEEEeeCCCCCCCC-CC----CCCCCCcceeeeccCcCceEeCCccccCcccccCccccceeeccc---------
Q 002362 799 SLTNLRSLDLDDCENCEKL-PP----LGKLPSLEKLSISFMCSVKRVDNEILGIEITIAFPKLKSLTISWI--------- 864 (930)
Q Consensus 799 ~l~~L~~L~L~~~~~~~~l-~~----l~~l~~L~~L~L~~~~~l~~~~~~~~~~~~~~~f~~L~~L~l~~~--------- 864 (930)
..+.|+.+++++|.+.... .. +...++|+.|+|+++. +...+-...........+.|++|.+++|
T Consensus 310 ~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~-i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~ 388 (460)
T d1z7xw1 310 PGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNR-LEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSS 388 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSB-CHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHH
T ss_pred cccccccccccccchhhhhhhhcccccccccchhhhheeeec-ccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHH
Confidence 2356788888877654321 11 3345678888887653 2111000000000013456888888777
Q ss_pred ------cccccceeeeccCCccCC-----CCCCCC-CCCCccEEEEecC
Q 002362 865 ------IMPRLSSLTFDSCPKLKA-----LPDHFH-QTTTLKEFNIGWN 901 (930)
Q Consensus 865 ------~lp~L~~L~l~~c~~L~~-----lp~~l~-~l~~L~~L~l~~n 901 (930)
.+++|++|+|++| .+.. +...+. ..+.|+.|++.+|
T Consensus 389 l~~~l~~~~~L~~L~Ls~N-~i~~~g~~~l~~~l~~~~~~L~~l~l~~~ 436 (460)
T d1z7xw1 389 LAATLLANHSLRELDLSNN-CLGDAGILQLVESVRQPGCLLEQLVLYDI 436 (460)
T ss_dssp HHHHHHHCCCCCEEECCSS-SCCHHHHHHHHHHHTSTTCCCCEEECTTC
T ss_pred HHHHHhcCCCCCEEECCCC-cCCHHHHHHHHHHHHhCCCccCEEECCCC
Confidence 2588999999988 4432 222222 3457999999985
No 33
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.78 E-value=3.5e-09 Score=101.93 Aligned_cols=106 Identities=16% Similarity=0.188 Sum_probs=63.8
Q ss_pred CCccEEEEccccccccchhhhHHHHHhhcCCcceEEEcCCcccccCCCCCcccCcccccCCCCCeeeccCCccccccc-c
Q 002362 552 KRMRSLIIDYSRYFHLYLNGKILERLFRESTSLRVLEFGDWARSLQLGPLTRIPRNIERLVHLRYLNLSNQSIRKLPD-T 630 (930)
Q Consensus 552 ~~Lr~L~l~~~~~~~~~~~~~~~~~~~~~~~~Lr~L~L~~~~~~~~~~~~~~lp~~i~~L~~Lr~L~L~~~~i~~lp~-~ 630 (930)
+++++|++++|.+... .....|.++++|+.|+|++|... ...+..+..+.+|++|+|++|.|+.+|. .
T Consensus 29 ~~l~~L~Ls~N~i~~~-----~~~~~f~~l~~L~~L~L~~N~i~------~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~ 97 (192)
T d1w8aa_ 29 LHTTELLLNDNELGRI-----SSDGLFGRLPHLVKLELKRNQLT------GIEPNAFEGASHIQELQLGENKIKEISNKM 97 (192)
T ss_dssp TTCSEEECCSCCCCSB-----CCSCSGGGCTTCCEEECCSSCCC------CBCTTTTTTCTTCCEEECCSCCCCEECSSS
T ss_pred CCCCEEEeCCCCCccc-----ccccccCCCceEeeeeccccccc------cccccccccccccceeeeccccccccCHHH
Confidence 4667777776654211 11233566677777777654322 2234556667777777777777776654 3
Q ss_pred cccCCcccEEeccCCCCCccccc-cccccCCcceEeecCc
Q 002362 631 LCELYNLQKLDISCCCKLKELPQ-GIGKLINMRHLLNYGT 669 (930)
Q Consensus 631 i~~L~~L~~L~l~~~~~~~~lp~-~i~~L~~L~~L~l~~~ 669 (930)
|.++++|++|+|++|. +..+|. .|..+++|++|++++|
T Consensus 98 F~~l~~L~~L~L~~N~-l~~i~~~~f~~l~~L~~l~L~~N 136 (192)
T d1w8aa_ 98 FLGLHQLKTLNLYDNQ-ISCVMPGSFEHLNSLTSLNLASN 136 (192)
T ss_dssp STTCTTCCEEECCSSC-CCEECTTSSTTCTTCCEEECTTC
T ss_pred HhCCCcccccccCCcc-ccccCHHHhcCCccccccccccc
Confidence 5667777777777766 555543 3566777777777666
No 34
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.72 E-value=6.9e-08 Score=95.21 Aligned_cols=181 Identities=14% Similarity=0.085 Sum_probs=114.9
Q ss_pred CceecchhhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcC--CeEEEEEeCCCccHHHHHHH
Q 002362 170 EEICGRVDEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKF--DKILWVCVSETFEEFRVAKA 247 (930)
Q Consensus 170 ~~~vGr~~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F--~~~~wv~vs~~~~~~~~~~~ 247 (930)
.+++|.++.++.+..++... ...-+.++|++|+||||+|+.+++. ....+ ..++-+..+.......+...
T Consensus 15 ~d~ig~~~~~~~L~~~~~~~------~~~~~ll~Gp~G~GKTt~a~~la~~--l~~~~~~~~~~~~n~~~~~~~~~i~~~ 86 (224)
T d1sxjb2 15 SDIVGNKETIDRLQQIAKDG------NMPHMIISGMPGIGKTTSVHCLAHE--LLGRSYADGVLELNASDDRGIDVVRNQ 86 (224)
T ss_dssp GGCCSCTHHHHHHHHHHHSC------CCCCEEEECSTTSSHHHHHHHHHHH--HHGGGHHHHEEEECTTSCCSHHHHHTH
T ss_pred HHhcCCHHHHHHHHHHHHcC------CCCeEEEECCCCCCchhhHHHHHHH--HhccccccccccccccccCCceehhhH
Confidence 56899999999999999743 3334779999999999999999874 22221 12344445554444443333
Q ss_pred HHHHhcCCCCCCccHHHHHHHHHHHhcCceEEEEEeCccccCccChhhhhhhhccCCCCcEEEEEcCCh-HHHhh-hCCc
Q 002362 248 IVEALDGHESRLGEFQSLIKHIYESVAGMCFLLVLDDVWDGNYMKWEPFFHCLKNGLHRSKILVTTRKK-SVASM-MGST 325 (930)
Q Consensus 248 i~~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~iivTtr~~-~v~~~-~~~~ 325 (930)
+......... ...++.-++|+|++..........+...+.......++++||... .+... ....
T Consensus 87 ~~~~~~~~~~--------------~~~~~~kviiiDe~d~~~~~~~~~ll~~~e~~~~~~~~i~~~~~~~~i~~~l~sr~ 152 (224)
T d1sxjb2 87 IKHFAQKKLH--------------LPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSQC 152 (224)
T ss_dssp HHHHHHBCCC--------------CCTTCCEEEEEESGGGSCHHHHHTTHHHHHHTTTTEEEEEEESCGGGSCHHHHTTS
T ss_pred HHHHHHhhcc--------------CCCcceEEEEEecccccchhHHHHHhhhccccccceeeeeccCchhhhhhHHHHHH
Confidence 3222211110 012345688999998766555555666666666667776666653 33222 2346
Q ss_pred ceEeCCCCChHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHHHcCCchhHH
Q 002362 326 NIISIKELTEEECRLLFNKIAFSDRPIEEREKLEQIGRKIANKCKGLPLAA 376 (930)
Q Consensus 326 ~~~~l~~L~~~~~~~lf~~~~~~~~~~~~~~~l~~~~~~i~~~c~glPLai 376 (930)
..+++.+++.++-..++.+.+......-.. +....|++.|+|.+..+
T Consensus 153 ~~i~~~~~~~~~i~~~l~~i~~~e~~~i~~----~~l~~I~~~s~Gd~R~a 199 (224)
T d1sxjb2 153 AILRYSKLSDEDVLKRLLQIIKLEDVKYTN----DGLEAIIFTAEGDMRQA 199 (224)
T ss_dssp EEEECCCCCHHHHHHHHHHHHHHHTCCBCH----HHHHHHHHHHTTCHHHH
T ss_pred HHhhhcccchhhhHHHHHHHHHhcccCCCH----HHHHHHHHHcCCcHHHH
Confidence 789999999999999998876533221122 34678999999987543
No 35
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.69 E-value=1.2e-07 Score=94.38 Aligned_cols=194 Identities=11% Similarity=0.004 Sum_probs=118.2
Q ss_pred CceecchhhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHHHH-hcCCeEEEEEeCCCccHHHHHHHH
Q 002362 170 EEICGRVDEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVK-RKFDKILWVCVSETFEEFRVAKAI 248 (930)
Q Consensus 170 ~~~vGr~~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~-~~F~~~~wv~vs~~~~~~~~~~~i 248 (930)
++++|.++.++.+..++... ....+.++|++|+||||+|+.+++...-. ........+..+.......+...+
T Consensus 12 ~diig~~~~~~~l~~~i~~~------~~~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (237)
T d1sxjd2 12 DEVTAQDHAVTVLKKTLKSA------NLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKV 85 (237)
T ss_dssp TTCCSCCTTHHHHHHHTTCT------TCCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSSSCCCHHHHTTHH
T ss_pred HHccCcHHHHHHHHHHHHcC------CCCeEEEECCCCCChHHHHHHHHHHHcCCcccccchhheeccccccchHHHHHH
Confidence 45899999999999998632 33447899999999999999998852111 123344555566655555444333
Q ss_pred HHHhcCCCCCCccHHHHHHHHHHHhcCceEEEEEeCccccCccChhhhhhhhccCCCCcEEEEEcCCh-HHHhh-hCCcc
Q 002362 249 VEALDGHESRLGEFQSLIKHIYESVAGMCFLLVLDDVWDGNYMKWEPFFHCLKNGLHRSKILVTTRKK-SVASM-MGSTN 326 (930)
Q Consensus 249 ~~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~iivTtr~~-~v~~~-~~~~~ 326 (930)
-.......... .. ..+......+.-++|+|++.......+..+...+.......++|+|+... .+... .....
T Consensus 86 ~~~~~~~~~~~-~~----~~~~~~~~~~~~viiiDe~d~l~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~l~sr~~ 160 (237)
T d1sxjd2 86 KNFARLTVSKP-SK----HDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASQCS 160 (237)
T ss_dssp HHHHHSCCCCC-CT----THHHHSCCCSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHHHSE
T ss_pred HHHhhhhhhhh-hH----HHHhhccccCceEEEEecccccCHHHHHHHhhccccccccccccccccccccccccccchhh
Confidence 33222211111 11 11112233444479999998765555566666565555666777776653 22211 12246
Q ss_pred eEeCCCCChHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHHHcCCch-hHHHH
Q 002362 327 IISIKELTEEECRLLFNKIAFSDRPIEEREKLEQIGRKIANKCKGLP-LAAKI 378 (930)
Q Consensus 327 ~~~l~~L~~~~~~~lf~~~~~~~~~~~~~~~l~~~~~~i~~~c~glP-Lai~~ 378 (930)
.+++.+++.++...++.+.+....-.-.+ ++.+.|++.++|-+ -|+..
T Consensus 161 ~i~f~~~~~~~~~~~L~~i~~~e~i~i~~----~~l~~ia~~s~gd~R~ai~~ 209 (237)
T d1sxjd2 161 KFRFKALDASNAIDRLRFISEQENVKCDD----GVLERILDISAGDLRRGITL 209 (237)
T ss_dssp EEECCCCCHHHHHHHHHHHHHTTTCCCCH----HHHHHHHHHTSSCHHHHHHH
T ss_pred hhccccccccccchhhhhhhhhhcCcCCH----HHHHHHHHHcCCCHHHHHHH
Confidence 89999999999999999887654332222 34677888998854 34443
No 36
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.69 E-value=1.4e-10 Score=112.09 Aligned_cols=108 Identities=21% Similarity=0.239 Sum_probs=80.6
Q ss_pred HHHhhcCCcceEEEcCCcccccCCCCCcccCcccccCCCCCeeeccCCcccccccccccCCcccEEeccCCCCCcccccc
Q 002362 575 ERLFRESTSLRVLEFGDWARSLQLGPLTRIPRNIERLVHLRYLNLSNQSIRKLPDTLCELYNLQKLDISCCCKLKELPQG 654 (930)
Q Consensus 575 ~~~~~~~~~Lr~L~L~~~~~~~~~~~~~~lp~~i~~L~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~l~~~~~~~~lp~~ 654 (930)
+..+..+++|+.|+|++| .+..++ .+..|++|++|+|++|.|+.+|.....+++|++|++++|. +..++ .
T Consensus 41 ~~sl~~L~~L~~L~Ls~n-------~I~~i~-~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N~-i~~l~-~ 110 (198)
T d1m9la_ 41 DATLSTLKACKHLALSTN-------NIEKIS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQ-IASLS-G 110 (198)
T ss_dssp HHHHHHTTTCCEEECSEE-------EESCCC-CHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEEE-CCCHH-H
T ss_pred hhHHhcccccceeECccc-------CCCCcc-cccCCccccChhhccccccccccccccccccccccccccc-ccccc-c
Confidence 344778888999999854 445554 5788889999999999888888766667789999998887 66664 4
Q ss_pred ccccCCcceEeecCcccccccC--CcCCCCCCCCcCCceEe
Q 002362 655 IGKLINMRHLLNYGTISLRYMP--VGIGRLTSLRTLDEFYV 693 (930)
Q Consensus 655 i~~L~~L~~L~l~~~~~~~~~p--~~i~~l~~L~~L~~~~~ 693 (930)
+..+++|++|++++| .+..++ ..++.+++|+.|++.++
T Consensus 111 ~~~l~~L~~L~L~~N-~i~~~~~~~~l~~l~~L~~L~L~~N 150 (198)
T d1m9la_ 111 IEKLVNLRVLYMSNN-KITNWGEIDKLAALDKLEDLLLAGN 150 (198)
T ss_dssp HHHHHHSSEEEESEE-ECCCHHHHHHHTTTTTCSEEEECSS
T ss_pred ccccccccccccccc-hhccccccccccCCCccceeecCCC
Confidence 788889999999887 344444 34677777777776543
No 37
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.68 E-value=8.1e-08 Score=94.98 Aligned_cols=180 Identities=11% Similarity=0.057 Sum_probs=111.0
Q ss_pred CceecchhhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHHHHHHHHH
Q 002362 170 EEICGRVDEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEFRVAKAIV 249 (930)
Q Consensus 170 ~~~vGr~~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~~~~i~ 249 (930)
.+++|.++.++.+..++... ....+.++|++|+||||+|+.+++..........+.-+..+...+.......+.
T Consensus 14 ~divg~~~~~~~L~~~i~~~------~~~~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 87 (227)
T d1sxjc2 14 DEVYGQNEVITTVRKFVDEG------KLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIK 87 (227)
T ss_dssp GGCCSCHHHHHHHHHHHHTT------CCCCEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECTTSCCSHHHHHTHHH
T ss_pred HHccCcHHHHHHHHHHHHcC------CCCeEEEECCCCCChhHHHHHHHHHhhcCCCcceeEEecccccCCeeeeecchh
Confidence 56999999999999998643 233467999999999999999988421111111222233333333322211111
Q ss_pred HHhcCCCCCCccHHHHHHHHHHHhcCceEEEEEeCccccCccChhhhhhhhccCCCCcEEEEEcCCh-HHHhh-hCCcce
Q 002362 250 EALDGHESRLGEFQSLIKHIYESVAGMCFLLVLDDVWDGNYMKWEPFFHCLKNGLHRSKILVTTRKK-SVASM-MGSTNI 327 (930)
Q Consensus 250 ~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~iivTtr~~-~v~~~-~~~~~~ 327 (930)
...... ....+++-++|+|++.......-..+...+....+.++++++|... .+... ......
T Consensus 88 ~~~~~~---------------~~~~~~~kiiiiDe~d~~~~~~~~~Ll~~le~~~~~~~~~~~~~~~~~i~~~i~sr~~~ 152 (227)
T d1sxjc2 88 DFASTR---------------QIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSQCTR 152 (227)
T ss_dssp HHHHBC---------------CSSSCSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHTTSEE
T ss_pred hccccc---------------cccCCCeEEEEEeccccchhhHHHHHHHHhhhcccceeeccccCcHHHhHHHHHHHHhh
Confidence 111100 0112344588999998765544456777777666778888877754 22222 234668
Q ss_pred EeCCCCChHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHHHcCCchh
Q 002362 328 ISIKELTEEECRLLFNKIAFSDRPIEEREKLEQIGRKIANKCKGLPL 374 (930)
Q Consensus 328 ~~l~~L~~~~~~~lf~~~~~~~~~~~~~~~l~~~~~~i~~~c~glPL 374 (930)
+++.+++.++-..++.+.+......-.+ +....|++.++|-.-
T Consensus 153 i~~~~~~~~~i~~~l~~I~~~e~i~i~~----~~l~~i~~~s~Gd~R 195 (227)
T d1sxjc2 153 FRFQPLPQEAIERRIANVLVHEKLKLSP----NAEKALIELSNGDMR 195 (227)
T ss_dssp EECCCCCHHHHHHHHHHHHHTTTCCBCH----HHHHHHHHHHTTCHH
T ss_pred hccccccccccccccccccccccccCCH----HHHHHHHHHcCCcHH
Confidence 9999999999999998877554322222 336778999998653
No 38
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.67 E-value=1.4e-08 Score=97.53 Aligned_cols=87 Identities=21% Similarity=0.227 Sum_probs=39.4
Q ss_pred CcccCcccccCCCCCeeeccCCcccc-c-ccccccCCcccEEeccCCCCCccccccccccCCcceEeecCcccccccCC-
Q 002362 601 LTRIPRNIERLVHLRYLNLSNQSIRK-L-PDTLCELYNLQKLDISCCCKLKELPQGIGKLINMRHLLNYGTISLRYMPV- 677 (930)
Q Consensus 601 ~~~lp~~i~~L~~Lr~L~L~~~~i~~-l-p~~i~~L~~L~~L~l~~~~~~~~lp~~i~~L~~L~~L~l~~~~~~~~~p~- 677 (930)
++.+|..|. .++++|+|++|.|+. + +..+..+++|++|++++|......+..+..+++|++|++++| .+..+|+
T Consensus 20 L~~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N-~l~~l~~~ 96 (192)
T d1w8aa_ 20 LKEIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN-KIKEISNK 96 (192)
T ss_dssp CSSCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC-CCCEECSS
T ss_pred cCccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc-cccccCHH
Confidence 344444432 345555555555542 2 223345555555555555433333344445555555555555 2333332
Q ss_pred cCCCCCCCCcCCc
Q 002362 678 GIGRLTSLRTLDE 690 (930)
Q Consensus 678 ~i~~l~~L~~L~~ 690 (930)
.|.++++|++|++
T Consensus 97 ~F~~l~~L~~L~L 109 (192)
T d1w8aa_ 97 MFLGLHQLKTLNL 109 (192)
T ss_dssp SSTTCTTCCEEEC
T ss_pred HHhCCCccccccc
Confidence 2344444444443
No 39
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=98.61 E-value=1.5e-07 Score=93.28 Aligned_cols=179 Identities=12% Similarity=0.053 Sum_probs=110.5
Q ss_pred CceecchhhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCC-eEEEEEeCCCccHHHHHHHH
Q 002362 170 EEICGRVDEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFD-KILWVCVSETFEEFRVAKAI 248 (930)
Q Consensus 170 ~~~vGr~~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~-~~~wv~vs~~~~~~~~~~~i 248 (930)
.+++|.++.++++..++... ....+.++|++|+||||+|+.+++... ...++ ..+-+.++...+...+...+
T Consensus 24 ~diig~~~~~~~l~~~i~~~------~~~~lll~Gp~G~GKTtla~~iak~l~-~~~~~~~~~e~n~s~~~~~~~~~~~~ 96 (231)
T d1iqpa2 24 DDIVGQEHIVKRLKHYVKTG------SMPHLLFAGPPGVGKTTAALALARELF-GENWRHNFLELNASDERGINVIREKV 96 (231)
T ss_dssp TTCCSCHHHHHHHHHHHHHT------CCCEEEEESCTTSSHHHHHHHHHHHHH-GGGHHHHEEEEETTCHHHHHTTHHHH
T ss_pred HHccCcHHHHHHHHHHHHcC------CCCeEEEECCCCCcHHHHHHHHHHHHH-hcccCCCeeEEecCcccchhHHHHHH
Confidence 57999999999999998643 345688999999999999999988321 11222 12233344322221111111
Q ss_pred HHHhcCCCCCCccHHHHHHHHHHHhcCceEEEEEeCccccCccChhhhhhhhccCCCCcEEEEEcCCh-HHHhh-hCCcc
Q 002362 249 VEALDGHESRLGEFQSLIKHIYESVAGMCFLLVLDDVWDGNYMKWEPFFHCLKNGLHRSKILVTTRKK-SVASM-MGSTN 326 (930)
Q Consensus 249 ~~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~iivTtr~~-~v~~~-~~~~~ 326 (930)
....... .....++.++++|++.......+..+...+........+|.||... .+... .....
T Consensus 97 ~~~~~~~---------------~~~~~~~~iilide~d~~~~~~~~~ll~~l~~~~~~~~~i~~~n~~~~i~~~l~sR~~ 161 (231)
T d1iqpa2 97 KEFARTK---------------PIGGASFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCA 161 (231)
T ss_dssp HHHHHSC---------------CGGGCSCEEEEEETGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHHTEE
T ss_pred HHHHhhh---------------hccCCCceEEeehhhhhcchhHHHHHhhhcccCCcceEEEeccCChhhchHhHhCccc
Confidence 1111000 0113466789999998766666666776666555555666666543 33222 23356
Q ss_pred eEeCCCCChHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHHHcCCchh
Q 002362 327 IISIKELTEEECRLLFNKIAFSDRPIEEREKLEQIGRKIANKCKGLPL 374 (930)
Q Consensus 327 ~~~l~~L~~~~~~~lf~~~~~~~~~~~~~~~l~~~~~~i~~~c~glPL 374 (930)
.+.+.+.+.++....+++.+......-.. +....|++.++|-.-
T Consensus 162 ~i~~~~~~~~~~~~~l~~~~~~e~i~i~~----~~l~~I~~~~~gdiR 205 (231)
T d1iqpa2 162 IFRFRPLRDEDIAKRLRYIAENEGLELTE----EGLQAILYIAEGDMR 205 (231)
T ss_dssp EEECCCCCHHHHHHHHHHHHHTTTCEECH----HHHHHHHHHHTTCHH
T ss_pred cccccccchhhHHHHHHHHHHHhCCCCCH----HHHHHHHHHcCCCHH
Confidence 89999999999999998887654432222 235778889988654
No 40
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.57 E-value=1.4e-09 Score=115.77 Aligned_cols=255 Identities=16% Similarity=0.072 Sum_probs=125.1
Q ss_pred ccccCCCCccEEEEccccccccchhhhHHHHHhhcCCcceEEEcCCcccccCC----CCCcccCcccccCCCCCeeeccC
Q 002362 546 VSTCGVKRMRSLIIDYSRYFHLYLNGKILERLFRESTSLRVLEFGDWARSLQL----GPLTRIPRNIERLVHLRYLNLSN 621 (930)
Q Consensus 546 ~~~~~~~~Lr~L~l~~~~~~~~~~~~~~~~~~~~~~~~Lr~L~L~~~~~~~~~----~~~~~lp~~i~~L~~Lr~L~L~~ 621 (930)
..+.....++.|.++++.+... ....+...+...+.|+.|+++++...... ..+..+...+...++|+.|+|++
T Consensus 25 ~~L~~~~~l~~L~Ls~n~i~~~--~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~ 102 (344)
T d2ca6a1 25 AVLLEDDSVKEIVLSGNTIGTE--AARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 102 (344)
T ss_dssp HHHHHCSCCCEEECTTSEECHH--HHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHhhCCCCCEEECcCCcCCHH--HHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccc
Confidence 3445566777777777653211 11223344566677777777754322000 00111223344566777777777
Q ss_pred Ccccc-----cccccccCCcccEEeccCCCCCcc----cccc---------ccccCCcceEeecCcccccccCCcCCCCC
Q 002362 622 QSIRK-----LPDTLCELYNLQKLDISCCCKLKE----LPQG---------IGKLINMRHLLNYGTISLRYMPVGIGRLT 683 (930)
Q Consensus 622 ~~i~~-----lp~~i~~L~~L~~L~l~~~~~~~~----lp~~---------i~~L~~L~~L~l~~~~~~~~~p~~i~~l~ 683 (930)
|.+.. +...+...++|++|++++|..... +... ....+.|+.|.++++..... ++
T Consensus 103 n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~---~~---- 175 (344)
T d2ca6a1 103 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENG---SM---- 175 (344)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGG---GH----
T ss_pred cccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeeccccccccc---cc----
Confidence 76552 344455667777777776652111 0000 01233455555544321000 00
Q ss_pred CCCcCCceEeCCCCCcCCCcccccccccCCCcCCeeeeecccCCCChhhhhhccccCCCCCCeeEEEeeCCCCCCcCCCc
Q 002362 684 SLRTLDEFYVSGGGGIDGRKACRLESLRSLELLQVCGIRRLGNVTDVGEAKRLELDKMKNLSCLKLLFNKEEGDGQRRKN 763 (930)
Q Consensus 684 ~L~~L~~~~~~~~~~~~~~~~~~l~~L~~L~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~L~~~~~~~~~~~~~~ 763 (930)
..+...+...+.|+.|++..+..... .........+..+++|+.|++++|.++.
T Consensus 176 -----------------~~l~~~l~~~~~L~~L~L~~n~i~~~--g~~~~l~~~l~~~~~L~~L~Ls~N~i~~------- 229 (344)
T d2ca6a1 176 -----------------KEWAKTFQSHRLLHTVKMVQNGIRPE--GIEHLLLEGLAYCQELKVLDLQDNTFTH------- 229 (344)
T ss_dssp -----------------HHHHHHHHHCTTCCEEECCSSCCCHH--HHHHHHHTTGGGCTTCCEEECCSSCCHH-------
T ss_pred -----------------ccccchhhhhhhhccccccccccccc--ccccchhhhhcchhhhcccccccccccc-------
Confidence 00011223333444444333321100 0011122245567788888888776542
Q ss_pred cchHHHhhcCCCCCCcceEEEeeccCCCCCCccc----c--cccCccEEEeeCCCCCCC----CCC-C-CCCCCcceeee
Q 002362 764 EDDQLLLEFLQPPPNLRKLLIGSYRGKTVFPPWM----M--SLTNLRSLDLDDCENCEK----LPP-L-GKLPSLEKLSI 831 (930)
Q Consensus 764 ~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~p~~~----~--~l~~L~~L~L~~~~~~~~----l~~-l-~~l~~L~~L~L 831 (930)
.....+...+..+++|++|+|++|.+...-...+ . ..+.|++|+|++|.+... +.. + .++++|+.|+|
T Consensus 230 ~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l 309 (344)
T d2ca6a1 230 LGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLEL 309 (344)
T ss_dssp HHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEEC
T ss_pred cccccccccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEEC
Confidence 1123345566777888888888887543111111 1 235688888888865431 111 2 25678888888
Q ss_pred ccCc
Q 002362 832 SFMC 835 (930)
Q Consensus 832 ~~~~ 835 (930)
+++.
T Consensus 310 ~~N~ 313 (344)
T d2ca6a1 310 NGNR 313 (344)
T ss_dssp TTSB
T ss_pred CCCc
Confidence 7643
No 41
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.57 E-value=5.6e-10 Score=119.04 Aligned_cols=264 Identities=17% Similarity=0.120 Sum_probs=150.7
Q ss_pred HhhcCCcceEEEcCCcccccCCCCCcccCcccccCCCCCeeeccCCcccc-----------cccccccCCcccEEeccCC
Q 002362 577 LFRESTSLRVLEFGDWARSLQLGPLTRIPRNIERLVHLRYLNLSNQSIRK-----------LPDTLCELYNLQKLDISCC 645 (930)
Q Consensus 577 ~~~~~~~Lr~L~L~~~~~~~~~~~~~~lp~~i~~L~~Lr~L~L~~~~i~~-----------lp~~i~~L~~L~~L~l~~~ 645 (930)
.+.....|+.|+|++|... ......+...+...++|+.|+++++.+.. +...+..+++|+.|++++|
T Consensus 26 ~L~~~~~l~~L~Ls~n~i~--~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n 103 (344)
T d2ca6a1 26 VLLEDDSVKEIVLSGNTIG--TEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN 103 (344)
T ss_dssp HHHHCSCCCEEECTTSEEC--HHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSC
T ss_pred HHhhCCCCCEEECcCCcCC--HHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccc
Confidence 3677889999999976432 11223455567788999999999875432 2334567789999999988
Q ss_pred CCCc----cccccccccCCcceEeecCcccccccCCcCCCCCCCCcCCceEeCCCCCcCCCcccccccccCCCcCCeeee
Q 002362 646 CKLK----ELPQGIGKLINMRHLLNYGTISLRYMPVGIGRLTSLRTLDEFYVSGGGGIDGRKACRLESLRSLELLQVCGI 721 (930)
Q Consensus 646 ~~~~----~lp~~i~~L~~L~~L~l~~~~~~~~~p~~i~~l~~L~~L~~~~~~~~~~~~~~~~~~l~~L~~L~~L~~~~~ 721 (930)
..-. .+...+...++|++|++++|.....-...++. .|..+.. .........|+.+.+..+
T Consensus 104 ~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~--~l~~~~~-------------~~~~~~~~~L~~l~l~~n 168 (344)
T d2ca6a1 104 AFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIAR--ALQELAV-------------NKKAKNAPPLRSIICGRN 168 (344)
T ss_dssp CCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHH--HHHHHHH-------------HHHHHTCCCCCEEECCSS
T ss_pred ccccccccchhhhhcccccchheecccccccccccccccc--ccccccc-------------ccccccCcccceeecccc
Confidence 7322 24555667889999999887421110000100 0000000 000011122222222222
Q ss_pred ecccCCCChhhhhhccccCCCCCCeeEEEeeCCCCCCcCCCccchHHHhhcCCCCCCcceEEEeeccCCCC----CCccc
Q 002362 722 RRLGNVTDVGEAKRLELDKMKNLSCLKLLFNKEEGDGQRRKNEDDQLLLEFLQPPPNLRKLLIGSYRGKTV----FPPWM 797 (930)
Q Consensus 722 ~~~~~~~~~~~~~~~~l~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~----~p~~~ 797 (930)
... ..........+...+.|+.|++++|.+... .....+...+..+++|+.|++++|.+... +...+
T Consensus 169 ~i~---~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~------g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l 239 (344)
T d2ca6a1 169 RLE---NGSMKEWAKTFQSHRLLHTVKMVQNGIRPE------GIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIAL 239 (344)
T ss_dssp CCT---GGGHHHHHHHHHHCTTCCEEECCSSCCCHH------HHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHG
T ss_pred ccc---ccccccccchhhhhhhhccccccccccccc------ccccchhhhhcchhhhcccccccccccccccccccccc
Confidence 110 011122233456678999999999876531 00112345577889999999999976431 23445
Q ss_pred ccccCccEEEeeCCCCCCC----CC-CCC--CCCCcceeeeccCcCceEeCCccccCcccccCccccceeecccccc
Q 002362 798 MSLTNLRSLDLDDCENCEK----LP-PLG--KLPSLEKLSISFMCSVKRVDNEILGIEITIAFPKLKSLTISWIIMP 867 (930)
Q Consensus 798 ~~l~~L~~L~L~~~~~~~~----l~-~l~--~l~~L~~L~L~~~~~l~~~~~~~~~~~~~~~f~~L~~L~l~~~~lp 867 (930)
..+++|++|+|++|.+.+. +. .+. ..++|+.|+|++|. +...+-..........+++|+.|.+++|.++
T Consensus 240 ~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~-i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~ 315 (344)
T d2ca6a1 240 KSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNE-IELDAVRTLKTVIDEKMPDLLFLELNGNRFS 315 (344)
T ss_dssp GGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSC-CBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred cccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCc-CChHHHHHHHHHHHccCCCCCEEECCCCcCC
Confidence 6789999999999986542 11 122 34679999999764 2211100000000014688999999988543
No 42
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=98.55 E-value=7.3e-07 Score=88.44 Aligned_cols=193 Identities=15% Similarity=0.181 Sum_probs=111.1
Q ss_pred CceecchhhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHHHHHHHHH
Q 002362 170 EEICGRVDEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEFRVAKAIV 249 (930)
Q Consensus 170 ~~~vGr~~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~~~~i~ 249 (930)
.+++|.++..+.+..++... .-...+.|+|++|+||||+|+.+++. +..... .. ............+.
T Consensus 12 ~dlig~~~~~~~L~~~i~~~-----~~~~~~Ll~Gp~G~GKtt~a~~~~~~--l~~~~~----~~-~~~~~~~~~~~~i~ 79 (239)
T d1njfa_ 12 ADVVGQEHVLTALANGLSLG-----RIHHAYLFSGTRGVGKTSIARLLAKG--LNCETG----IT-ATPCGVCDNCREIE 79 (239)
T ss_dssp GGSCSCHHHHHHHHHHHHTT-----CCCSEEEEECSTTSSHHHHHHHHHHH--HHCTTC----SC-SSCCSCSHHHHHHH
T ss_pred HHccChHHHHHHHHHHHHcC-----CCCeeEEEECCCCCcHHHHHHHHHHH--hcCccc----cc-cCccccchHHHHHH
Confidence 47899999999999998642 23456789999999999999998763 211110 00 00001111111111
Q ss_pred HHhcC-----CCCCCccHHHHHHHHHHHh-----cCceEEEEEeCccccCccChhhhhhhhccCCCCcEEEEEcCCh-HH
Q 002362 250 EALDG-----HESRLGEFQSLIKHIYESV-----AGMCFLLVLDDVWDGNYMKWEPFFHCLKNGLHRSKILVTTRKK-SV 318 (930)
Q Consensus 250 ~~l~~-----~~~~~~~~~~~~~~l~~~l-----~~kr~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~iivTtr~~-~v 318 (930)
..-.. ...+....+.... +.+.. .+++-++|+|+++..+...-..+...+-.....+++|+||.+. .+
T Consensus 80 ~~~~~~~~~~~~~~~~~i~~ir~-~~~~~~~~~~~~~~kviiIde~d~l~~~~q~~Llk~lE~~~~~~~~il~tn~~~~i 158 (239)
T d1njfa_ 80 QGRFVDLIEIDAASRTKVEDTRD-LLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKL 158 (239)
T ss_dssp HTCCTTEEEEETTCSSSHHHHHH-HHHSCCCSCSSSSSEEEEEETGGGSCHHHHHHHHHHHHSCCTTEEEEEEESCGGGS
T ss_pred cCCCCeEEEecchhcCCHHHHHH-HHHHHHhccccCCCEEEEEECcccCCHHHHHHHHHHHhcCCCCeEEEEEcCCcccc
Confidence 11000 0001111222222 11211 2455689999998765444455666666666677777777654 22
Q ss_pred Hhhh-CCcceEeCCCCChHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHHHcCCchh-HHHHH
Q 002362 319 ASMM-GSTNIISIKELTEEECRLLFNKIAFSDRPIEEREKLEQIGRKIANKCKGLPL-AAKII 379 (930)
Q Consensus 319 ~~~~-~~~~~~~l~~L~~~~~~~lf~~~~~~~~~~~~~~~l~~~~~~i~~~c~glPL-ai~~~ 379 (930)
...+ .....+.+.+++.++-.+.+.+.+-.....-. .+....|++.++|.+- |+..+
T Consensus 159 ~~~i~SRc~~i~~~~~~~~~i~~~l~~i~~~e~~~~~----~~~l~~i~~~s~Gd~R~ain~l 217 (239)
T d1njfa_ 159 PVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHE----PRALQLLARAAEGSLRDALSLT 217 (239)
T ss_dssp CHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCCBC----HHHHHHHHHHTTTCHHHHHHHH
T ss_pred ChhHhhhhcccccccCcHHHhhhHHHHHHhhhccCCC----HHHHHHHHHHcCCCHHHHHHHH
Confidence 2222 33578999999999999888876643322111 2346778999999885 44443
No 43
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=98.54 E-value=3.4e-07 Score=90.69 Aligned_cols=154 Identities=16% Similarity=0.179 Sum_probs=99.2
Q ss_pred ceecchhhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHHH----HhcCCeEEEE-EeCCCccHHHHH
Q 002362 171 EICGRVDEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEV----KRKFDKILWV-CVSETFEEFRVA 245 (930)
Q Consensus 171 ~~vGr~~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~----~~~F~~~~wv-~vs~~~~~~~~~ 245 (930)
.++||++++++++..|... ...-+.+||.+|+|||++++.++..-.- .......+|. .++.
T Consensus 19 ~~igRd~Ei~~l~~iL~r~------~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~~-------- 84 (268)
T d1r6bx2 19 PLIGREKELERAIQVLCRR------RKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGS-------- 84 (268)
T ss_dssp CCCSCHHHHHHHHHHHTSS------SSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC---------
T ss_pred cccChHHHHHHHHHHHhcC------ccCCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEeeech--------
Confidence 4799999999999999743 2345679999999999999988873111 1112345553 2221
Q ss_pred HHHHHHhcCCCCCCccHHHHHHHHHHHh-cCceEEEEEeCccccC-----cc---Chhh-hhhhhccCCCCcEEEEEcCC
Q 002362 246 KAIVEALDGHESRLGEFQSLIKHIYESV-AGMCFLLVLDDVWDGN-----YM---KWEP-FFHCLKNGLHRSKILVTTRK 315 (930)
Q Consensus 246 ~~i~~~l~~~~~~~~~~~~~~~~l~~~l-~~kr~LlVlDdv~~~~-----~~---~~~~-l~~~l~~~~~gs~iivTtr~ 315 (930)
+-.......+.++....+.+.+ +.+..++++|++..-- .. +... ++++|.. ..-++|.||..
T Consensus 85 ------liag~~~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L~r--g~i~vIgatT~ 156 (268)
T d1r6bx2 85 ------LLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSS--GKIRVIGSTTY 156 (268)
T ss_dssp --------CCCCCSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSSCSSS--CCCEEEEEECH
T ss_pred ------HhccCccchhHHHHHHHHHHHhhccCCceEEecchHHHhcCCCCCCccccHHHHhhHHHhC--CCCeEEEeCCH
Confidence 1111223456666666666666 4567899999985421 00 1112 2233332 34689999998
Q ss_pred hHHHhhhCC-------cceEeCCCCChHHHHHHHHHHH
Q 002362 316 KSVASMMGS-------TNIISIKELTEEECRLLFNKIA 346 (930)
Q Consensus 316 ~~v~~~~~~-------~~~~~l~~L~~~~~~~lf~~~~ 346 (930)
++....... .+.+.+++++.+++..++...+
T Consensus 157 eey~~~~e~d~al~rrF~~I~V~Eps~e~t~~IL~~~~ 194 (268)
T d1r6bx2 157 QEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLK 194 (268)
T ss_dssp HHHHCCCCCTTSSGGGEEEEECCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhhcHHHHhhhcccccCCCCHHHHHHHHHHhh
Confidence 887765433 3588999999999999987644
No 44
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.50 E-value=2.2e-07 Score=93.50 Aligned_cols=192 Identities=13% Similarity=0.094 Sum_probs=101.8
Q ss_pred CceecchhhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHHH----HhcCCeEEEEEeCCC-------
Q 002362 170 EEICGRVDEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEV----KRKFDKILWVCVSET------- 238 (930)
Q Consensus 170 ~~~vGr~~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~----~~~F~~~~wv~vs~~------- 238 (930)
++++|.++..+.+..++.... ...-+.|+|++|+||||+|+.+++.... ...++...|...+..
T Consensus 11 ~diig~~~~~~~L~~~~~~~~-----~~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (252)
T d1sxje2 11 NALSHNEELTNFLKSLSDQPR-----DLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVV 85 (252)
T ss_dssp GGCCSCHHHHHHHHTTTTCTT-----CCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC------------------CCE
T ss_pred HHccCcHHHHHHHHHHHHcCC-----CCCeEEEECCCCCCHHHHHHHHHHhhcCccccccccccccccccccchhhhhhc
Confidence 469999988888887775422 3334779999999999999999874100 011112222111100
Q ss_pred --------------ccHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHhcCceEEEEEeCccccCccChhhhhhhhccCC
Q 002362 239 --------------FEEFRVAKAIVEALDGHESRLGEFQSLIKHIYESVAGMCFLLVLDDVWDGNYMKWEPFFHCLKNGL 304 (930)
Q Consensus 239 --------------~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~~~~ 304 (930)
.................... .. ..-.....++.-++|+|+++......+..+...+....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~iiiide~d~l~~~~~~~l~~~~e~~~ 159 (252)
T d1sxje2 86 SSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQV----DF--QDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYS 159 (252)
T ss_dssp ECSSEEEECCC----CCHHHHHHHHHHHTTTTC------------------CCEEEEEECTTSSCHHHHHHHHHHHHHST
T ss_pred cCCccceeeecccccCCcceeeehhhhhhhhhhh----hh--hhcccccCCCceEEEeccccccccccchhhhccccccc
Confidence 00111111111111110000 00 00001122344588999998765556666766666666
Q ss_pred CCcEEEEEcCChH-HHhh-hCCcceEeCCCCChHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHHHcCCchhH
Q 002362 305 HRSKILVTTRKKS-VASM-MGSTNIISIKELTEEECRLLFNKIAFSDRPIEEREKLEQIGRKIANKCKGLPLA 375 (930)
Q Consensus 305 ~gs~iivTtr~~~-v~~~-~~~~~~~~l~~L~~~~~~~lf~~~~~~~~~~~~~~~l~~~~~~i~~~c~glPLa 375 (930)
..+++|+||.+.+ +... .+-...+++.+++.++..+++.+.+-...-.... +++...|++.+.|.+..
T Consensus 160 ~~~~~Il~tn~~~~i~~~l~sR~~~i~~~~~~~~~~~~~l~~i~~~e~~~~~~---~~~l~~i~~~s~Gd~R~ 229 (252)
T d1sxje2 160 KNIRLIMVCDSMSPIIAPIKSQCLLIRCPAPSDSEISTILSDVVTNERIQLET---KDILKRIAQASNGNLRV 229 (252)
T ss_dssp TTEEEEEEESCSCSSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCEECC---SHHHHHHHHHHTTCHHH
T ss_pred ccccceeeeccccchhhhhhcchheeeecccchhhHHHHHHHHHHHcCCCCCc---HHHHHHHHHHcCCcHHH
Confidence 6677777776542 2111 1224578999999999999987765321111111 23457788999887754
No 45
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=98.49 E-value=6.6e-07 Score=83.31 Aligned_cols=150 Identities=14% Similarity=0.126 Sum_probs=93.0
Q ss_pred ceecchhhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHHH----HhcCCeEEEEEeCCCccHHHHHH
Q 002362 171 EICGRVDEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEV----KRKFDKILWVCVSETFEEFRVAK 246 (930)
Q Consensus 171 ~~vGr~~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~----~~~F~~~~wv~vs~~~~~~~~~~ 246 (930)
.++||++++++++..|... .-.-+.+||.+|+|||++++.++..-.- ...-+.++|.- +...+
T Consensus 23 ~~igRd~Ei~~l~~iL~r~------~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~l-----d~~~L-- 89 (195)
T d1jbka_ 23 PVIGRDEEIRRTIQVLQRR------TKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL-----DMGAL-- 89 (195)
T ss_dssp CCCSCHHHHHHHHHHHTSS------SSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEE-----CHHHH--
T ss_pred CCcCcHHHHHHHHHHHhcc------CCCCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEEe-----eHHHH--
Confidence 4789999999999999753 2345789999999999999888873111 11224555532 11111
Q ss_pred HHHHHhcCCCCCCccHHHHHHHHHHHh--cCceEEEEEeCccccC--------ccChhhhhhhhccCCCCcEEEEEcCCh
Q 002362 247 AIVEALDGHESRLGEFQSLIKHIYESV--AGMCFLLVLDDVWDGN--------YMKWEPFFHCLKNGLHRSKILVTTRKK 316 (930)
Q Consensus 247 ~i~~~l~~~~~~~~~~~~~~~~l~~~l--~~kr~LlVlDdv~~~~--------~~~~~~l~~~l~~~~~gs~iivTtr~~ 316 (930)
+. ......+.++....+.+.+ ...+.++++|++..-- .+.-+-+++.+..+ .-++|.||..+
T Consensus 90 -----iA-g~~~rG~~E~rl~~il~e~~~~~~~iILfIDeih~l~~~g~~~g~~d~~~~Lkp~L~rg--~l~~IgatT~e 161 (195)
T d1jbka_ 90 -----VA-GAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARG--ELHCVGATTLD 161 (195)
T ss_dssp -----HT-TTCSHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT------CCCCHHHHHHHHHTT--SCCEEEEECHH
T ss_pred -----hc-cCCccHHHHHHHHHHHHHHhcCCCcEEEEcchHHHHhcCCCCCCcccHHHHHHHHHhCC--CceEEecCCHH
Confidence 11 1122234555554444444 3457999999996421 11223345555543 46788888877
Q ss_pred HHHhhhCC-------cceEeCCCCChHHHHHH
Q 002362 317 SVASMMGS-------TNIISIKELTEEECRLL 341 (930)
Q Consensus 317 ~v~~~~~~-------~~~~~l~~L~~~~~~~l 341 (930)
+....... .+.+.++..+.+++..+
T Consensus 162 ey~~~~e~d~aL~rrF~~I~V~Ep~~e~t~~I 193 (195)
T d1jbka_ 162 EYRQYIEKDAALERRFQKVFVAEPSVEDTIAI 193 (195)
T ss_dssp HHHHHTTTCHHHHTTEEEEECCCCCHHHHHTT
T ss_pred HHHHHHHcCHHHHhcCCEeecCCCCHHHHHHH
Confidence 76655432 46889999998887654
No 46
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.42 E-value=2.4e-07 Score=84.98 Aligned_cols=85 Identities=20% Similarity=0.283 Sum_probs=47.4
Q ss_pred hhcCCcceEEEcCCcccccCCCCCcccC-cccccCCCCCeeeccCCcccccc-cccccCCcccEEeccCCCCCccccccc
Q 002362 578 FRESTSLRVLEFGDWARSLQLGPLTRIP-RNIERLVHLRYLNLSNQSIRKLP-DTLCELYNLQKLDISCCCKLKELPQGI 655 (930)
Q Consensus 578 ~~~~~~Lr~L~L~~~~~~~~~~~~~~lp-~~i~~L~~Lr~L~L~~~~i~~lp-~~i~~L~~L~~L~l~~~~~~~~lp~~i 655 (930)
+..+++|+.|++.++. .++.++ ..|.++.+|+.|+|++|+|+.++ ..|..+++|++|+|++|. +..+|.++
T Consensus 27 l~~l~~l~~L~l~~n~------~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~-l~~l~~~~ 99 (156)
T d2ifga3 27 LPGAENLTELYIENQQ------HLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA-LESLSWKT 99 (156)
T ss_dssp SCSCSCCSEEECCSCS------SCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC-CSCCCSTT
T ss_pred ccCccccCeeecCCCc------cccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCC-CcccChhh
Confidence 3445556666665322 234443 34556666666666666666653 335566666666666665 55565555
Q ss_pred cccCCcceEeecCc
Q 002362 656 GKLINMRHLLNYGT 669 (930)
Q Consensus 656 ~~L~~L~~L~l~~~ 669 (930)
....+|++|++++|
T Consensus 100 ~~~~~l~~L~L~~N 113 (156)
T d2ifga3 100 VQGLSLQELVLSGN 113 (156)
T ss_dssp TCSCCCCEEECCSS
T ss_pred hccccccccccCCC
Confidence 44445666666655
No 47
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=98.38 E-value=2.2e-06 Score=82.44 Aligned_cols=169 Identities=11% Similarity=0.077 Sum_probs=105.2
Q ss_pred hhhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHH------------------HHhcC-CeEEEEEeC
Q 002362 176 VDEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEE------------------VKRKF-DKILWVCVS 236 (930)
Q Consensus 176 ~~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~------------------~~~~F-~~~~wv~vs 236 (930)
+...+++.+.+... .-...+.++|+.|+||||+|+.+++... +...+ ....++...
T Consensus 8 ~~~~~~l~~~~~~~-----~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 82 (207)
T d1a5ta2 8 RPDFEKLVASYQAG-----RGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPE 82 (207)
T ss_dssp HHHHHHHHHHHHTT-----CCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTCCTTEEEECCC
T ss_pred HHHHHHHHHHHHcC-----CcCeEEEEECCCCCcHHHHHHHHHHhcccccccccccccccchhhhhhhccccccchhhhh
Confidence 44567777777642 2345689999999999999998876310 11111 111222111
Q ss_pred CCccHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHh-----cCceEEEEEeCccccCccChhhhhhhhccCCCCcEEEE
Q 002362 237 ETFEEFRVAKAIVEALDGHESRLGEFQSLIKHIYESV-----AGMCFLLVLDDVWDGNYMKWEPFFHCLKNGLHRSKILV 311 (930)
Q Consensus 237 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~l~~~l-----~~kr~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~iiv 311 (930)
. .......++.. .+.+.+ .+++-++|+||++.........++..+-.....+.+|+
T Consensus 83 ~------------------~~~~i~~~~ir-~l~~~~~~~~~~~~~kviIide~d~l~~~a~n~Llk~lEep~~~~~fIl 143 (207)
T d1a5ta2 83 K------------------GKNTLGVDAVR-EVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFL 143 (207)
T ss_dssp T------------------TCSSBCHHHHH-HHHHHTTSCCTTSSCEEEEESCGGGBCHHHHHHHHHHHTSCCTTEEEEE
T ss_pred h------------------cccccccchhh-HHhhhhhhccccCccceEEechhhhhhhhhhHHHHHHHHhhcccceeee
Confidence 1 01111222222 222222 35566999999998777777788888877777888887
Q ss_pred EcCChH-HHhhh-CCcceEeCCCCChHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHHHcCCchhHHH
Q 002362 312 TTRKKS-VASMM-GSTNIISIKELTEEECRLLFNKIAFSDRPIEEREKLEQIGRKIANKCKGLPLAAK 377 (930)
Q Consensus 312 Ttr~~~-v~~~~-~~~~~~~l~~L~~~~~~~lf~~~~~~~~~~~~~~~l~~~~~~i~~~c~glPLai~ 377 (930)
||++.. +...+ +-...+.+.+++.++....+.+..- . . ++.+..|++.++|.|-.+.
T Consensus 144 ~t~~~~~ll~tI~SRc~~i~~~~~~~~~~~~~L~~~~~--~---~----~~~~~~i~~~s~Gs~r~al 202 (207)
T d1a5ta2 144 ATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVT--M---S----QDALLAALRLSAGSPGAAL 202 (207)
T ss_dssp EESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHCC--C---C----HHHHHHHHHHTTTCHHHHH
T ss_pred eecChhhhhhhhcceeEEEecCCCCHHHHHHHHHHcCC--C---C----HHHHHHHHHHcCCCHHHHH
Confidence 777643 33332 3467899999999999999876431 1 1 1336778889999886543
No 48
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.35 E-value=4.9e-07 Score=82.83 Aligned_cols=102 Identities=18% Similarity=0.039 Sum_probs=80.9
Q ss_pred ceEEEcCCcccccCCCCCcccCcccccCCCCCeeeccCCc-cccccc-ccccCCcccEEeccCCCCCccc-cccccccCC
Q 002362 584 LRVLEFGDWARSLQLGPLTRIPRNIERLVHLRYLNLSNQS-IRKLPD-TLCELYNLQKLDISCCCKLKEL-PQGIGKLIN 660 (930)
Q Consensus 584 Lr~L~L~~~~~~~~~~~~~~lp~~i~~L~~Lr~L~L~~~~-i~~lp~-~i~~L~~L~~L~l~~~~~~~~l-p~~i~~L~~ 660 (930)
...++.++ . .+...|..+..+++|++|++++++ ++.++. .|.++++|+.|++++|. ++.+ |..|..+++
T Consensus 10 ~~~l~c~~---~----~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~-l~~i~~~~f~~l~~ 81 (156)
T d2ifga3 10 SSGLRCTR---D----GALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSG-LRFVAPDAFHFTPR 81 (156)
T ss_dssp SSCEECCS---S----CCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSC-CCEECTTGGGSCSC
T ss_pred CCeEEecC---C----CCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccc-cCCccccccccccc
Confidence 34566663 3 456678888899999999998764 998865 58999999999999998 7776 556899999
Q ss_pred cceEeecCcccccccCCcCCCCCCCCcCCceEeC
Q 002362 661 MRHLLNYGTISLRYMPVGIGRLTSLRTLDEFYVS 694 (930)
Q Consensus 661 L~~L~l~~~~~~~~~p~~i~~l~~L~~L~~~~~~ 694 (930)
|++|++++| .++.+|.++....+|+.|++..+.
T Consensus 82 L~~L~Ls~N-~l~~l~~~~~~~~~l~~L~L~~Np 114 (156)
T d2ifga3 82 LSRLNLSFN-ALESLSWKTVQGLSLQELVLSGNP 114 (156)
T ss_dssp CCEEECCSS-CCSCCCSTTTCSCCCCEEECCSSC
T ss_pred ccceeccCC-CCcccChhhhccccccccccCCCc
Confidence 999999999 667888876666678887765443
No 49
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=98.33 E-value=8.4e-06 Score=83.12 Aligned_cols=179 Identities=16% Similarity=0.113 Sum_probs=106.6
Q ss_pred cCCceecchhhHHHHHHHhccCC---CCCCCCeEEEEEEecCCChHHHHHHHHhchHHH---Hhc-CCeEEEEEeCCCcc
Q 002362 168 DEEEICGRVDEKNELLSKLLCES---SDSPKGLHIISIIGMGGMGKTTLAQLACNHEEV---KRK-FDKILWVCVSETFE 240 (930)
Q Consensus 168 ~~~~~vGr~~~~~~l~~~L~~~~---~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~---~~~-F~~~~wv~vs~~~~ 240 (930)
.++.+.||+.++++|.+.+.... ........++.|+|++|+||||+|+.+++.-.- ... .....++.+.....
T Consensus 14 ~P~~~~~Re~e~~~l~~~l~~~~~~~~~~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 93 (287)
T d1w5sa2 14 IPPELRVRRGEAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFNAPN 93 (287)
T ss_dssp CCSSCSSSCHHHHHHHHHHHHHHHTSSCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCCCCCCcceEEEeECCCCCCHHHHHHHHHHHHHhhcccccCCceeeeeccccccc
Confidence 45678999999999988763221 110122345677899999999999999985211 111 13466777777777
Q ss_pred HHHHHHHHHHHhcCCCCC-CccHHHHHHHHHHHh--cCceEEEEEeCccccC---ccC------hhhhhhhhccC---CC
Q 002362 241 EFRVAKAIVEALDGHESR-LGEFQSLIKHIYESV--AGMCFLLVLDDVWDGN---YMK------WEPFFHCLKNG---LH 305 (930)
Q Consensus 241 ~~~~~~~i~~~l~~~~~~-~~~~~~~~~~l~~~l--~~kr~LlVlDdv~~~~---~~~------~~~l~~~l~~~---~~ 305 (930)
.......+...+...... ..........+.+.. .+...++++|.+..-. ... +..+...+... ..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iide~d~l~~~~~~~~~~~~~l~~l~~~l~~~~~~~~ 173 (287)
T d1w5sa2 94 LYTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRIAAEDLYTLLRVHEEIPSRDGVNR 173 (287)
T ss_dssp HHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTTSCHHHHHHHHTHHHHSCCTTSCCB
T ss_pred hhhHHHHHhhhcccccccccchHHHHHHHHHHHHHhccCccccceeEEEEeccccccchhHHHHHHHHHHhcchhhcccc
Confidence 888888888877654322 233444445554444 3566788888775321 111 11122222221 12
Q ss_pred CcEEEEEcCChHHHh-------hh-CCcceEeCCCCChHHHHHHHHHHH
Q 002362 306 RSKILVTTRKKSVAS-------MM-GSTNIISIKELTEEECRLLFNKIA 346 (930)
Q Consensus 306 gs~iivTtr~~~v~~-------~~-~~~~~~~l~~L~~~~~~~lf~~~~ 346 (930)
-..|++++....... .. .....+.+.+++.++..+++..++
T Consensus 174 ~~~i~i~~~~~~~~~~~~~~~~~~~r~~~~i~f~~y~~~el~~Il~~r~ 222 (287)
T d1w5sa2 174 IGFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILEQRA 222 (287)
T ss_dssp EEEEEEEEETHHHHHHHHHCHHHHTTCSEEEECCCCCHHHHHHHHHHHH
T ss_pred eeEEeecccHHHHHHHHhhccchhcccceeeeccCCcHHHHHHHHhhhH
Confidence 233445554432211 11 124678999999999999998765
No 50
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.28 E-value=2.7e-06 Score=85.21 Aligned_cols=194 Identities=14% Similarity=0.146 Sum_probs=106.9
Q ss_pred CceecchhhHHHHHHHhccC-----------CCCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCC
Q 002362 170 EEICGRVDEKNELLSKLLCE-----------SSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSET 238 (930)
Q Consensus 170 ~~~vGr~~~~~~l~~~L~~~-----------~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~ 238 (930)
.+++|.++.+++|.+++... ...+....+.+.++|++|+||||+|+.+++. ..-..+++..+..
T Consensus 14 ~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~-----~~~~~~~~~~~~~ 88 (253)
T d1sxja2 14 QQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQE-----LGYDILEQNASDV 88 (253)
T ss_dssp GGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHH-----TTCEEEEECTTSC
T ss_pred HHhcCCHHHHHHHHHHHHhhhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHHHHHHHH-----HHhhhhccccccc
Confidence 57999999999999988431 0111335678999999999999999999873 1223556666655
Q ss_pred ccHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHhcCceEEEEEeCccccCccC---hhhhhhhhccCCCCcEEEEEcC-
Q 002362 239 FEEFRVAKAIVEALDGHESRLGEFQSLIKHIYESVAGMCFLLVLDDVWDGNYMK---WEPFFHCLKNGLHRSKILVTTR- 314 (930)
Q Consensus 239 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~---~~~l~~~l~~~~~gs~iivTtr- 314 (930)
.+...+-.. .+.............. ........++..++++|++....... +..+........ ..|++|+.
T Consensus 89 ~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~vi~ide~~~~~~~~~~~~~~~~~~~~~~~--~~ii~i~~~ 163 (253)
T d1sxja2 89 RSKTLLNAG-VKNALDNMSVVGYFKH--NEEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQFCRKTS--TPLILICNE 163 (253)
T ss_dssp CCHHHHHHT-GGGGTTBCCSTTTTTC------CCSSTTSEEEEECSGGGCCTTSTTHHHHHHHHHHHCS--SCEEEEESC
T ss_pred hhhHHHHHH-HHHHhhcchhhhhhhh--hhhcccccccceEEEeeeccccccchhhhhHHHhhhhcccc--ccccccccc
Confidence 544433322 2222111110000000 00111234667889999987543222 223333222222 23444433
Q ss_pred -Ch-HHHhhhCCcceEeCCCCChHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHHHcCCch-hHHH
Q 002362 315 -KK-SVASMMGSTNIISIKELTEEECRLLFNKIAFSDRPIEEREKLEQIGRKIANKCKGLP-LAAK 377 (930)
Q Consensus 315 -~~-~v~~~~~~~~~~~l~~L~~~~~~~lf~~~~~~~~~~~~~~~l~~~~~~i~~~c~glP-Lai~ 377 (930)
.. .+.........+++.+++.++....+...+-...-.-.+ +....|++.++|-. -|+.
T Consensus 164 ~~~~~~~~l~~~~~~i~f~~~~~~~i~~~l~~i~~~e~i~i~~----~~l~~i~~~s~GDiR~ai~ 225 (253)
T d1sxja2 164 RNLPKMRPFDRVCLDIQFRRPDANSIKSRLMTIAIREKFKLDP----NVIDRLIQTTRGDIRQVIN 225 (253)
T ss_dssp TTSSTTGGGTTTSEEEECCCCCHHHHHHHHHHHHHHHTCCCCT----THHHHHHHHTTTCHHHHHH
T ss_pred ccccccccccceeeeeeccccchhHHHHHHHHHHHHhCCCCCH----HHHHHHHHhCCCcHHHHHH
Confidence 22 222222335689999999999999888765321111111 23567888999966 4443
No 51
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=98.23 E-value=8.7e-06 Score=80.55 Aligned_cols=177 Identities=19% Similarity=0.132 Sum_probs=98.4
Q ss_pred CceecchhhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHHHHHHHHH
Q 002362 170 EEICGRVDEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEFRVAKAIV 249 (930)
Q Consensus 170 ~~~vGr~~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~~~~i~ 249 (930)
+++||-++.++++..++...... ....+-+.++|++|+||||+|+.+++. . .....+++.+.........
T Consensus 9 ddivGq~~~~~~L~~~i~~~~~~-~~~~~~~Ll~GPpG~GKTtla~~la~~--~---~~~~~~~~~~~~~~~~~~~---- 78 (239)
T d1ixsb2 9 DEYIGQERLKQKLRVYLEAAKAR-KEPLEHLLLFGPPGLGKTTLAHVIAHE--L---GVNLRVTSGPAIEKPGDLA---- 78 (239)
T ss_dssp GGSCSCHHHHHHHHHHHHHHTTS-SSCCCCEEEECCTTSCHHHHHHHHHHH--H---TCCEEEEETTTCCSHHHHH----
T ss_pred HHhCCHHHHHHHHHHHHHHHHhc-CCCCCeEEEECCCCCCHHHHHHHHHHH--h---CCCeEeccCCccccchhhH----
Confidence 46899999888888887543221 224556779999999999999999873 2 1223444444332222211
Q ss_pred HHhcCCCCCCccHHHHHHHHHHHhcCceEEEEEeCccccCccChhhhhhhhcc------------------CCCCcEEEE
Q 002362 250 EALDGHESRLGEFQSLIKHIYESVAGMCFLLVLDDVWDGNYMKWEPFFHCLKN------------------GLHRSKILV 311 (930)
Q Consensus 250 ~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~~------------------~~~gs~iiv 311 (930)
..+...+ +.+.++++|++.......-+.+...+-. ..+...++.
T Consensus 79 -----------------~~~~~~~-~~~~i~~iDe~~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 140 (239)
T d1ixsb2 79 -----------------AILANSL-EEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIG 140 (239)
T ss_dssp -----------------HHHHTTC-CTTCEEEEETGGGCCHHHHHHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEEEE
T ss_pred -----------------HHHHhhc-cCCCeeeeecccccchhHHHhhhhhhhhhhhhhhhccchhhhhcccCCCCEEEEe
Confidence 1111122 2233556677754332111112111110 012233443
Q ss_pred -EcCChHH--HhhhCCcceEeCCCCChHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHHHcCCchhHHHH
Q 002362 312 -TTRKKSV--ASMMGSTNIISIKELTEEECRLLFNKIAFSDRPIEEREKLEQIGRKIANKCKGLPLAAKI 378 (930)
Q Consensus 312 -Ttr~~~v--~~~~~~~~~~~l~~L~~~~~~~lf~~~~~~~~~~~~~~~l~~~~~~i~~~c~glPLai~~ 378 (930)
|++.... .........+.+...+.++...+..+.+........ .+....|++.++|.+-.+..
T Consensus 141 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~----~~~l~~ia~~s~gd~R~a~~ 206 (239)
T d1ixsb2 141 ATTRPGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRIT----EEAALEIGRRSRGTMRVAKR 206 (239)
T ss_dssp EESCCSSCSCGGGGGCSEEEECCCCCHHHHHHHHHHHHGGGCCCBC----HHHHHHHHHHTTSSHHHHHH
T ss_pred eccCcccccchhhcccceeeEeeccChhhhhHHHHHHHHHhCCccc----hHHHHHHHHHcCCCHHHHHH
Confidence 4443221 222233668899999999999988877654332221 23477899999998765543
No 52
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=98.17 E-value=8.2e-06 Score=80.70 Aligned_cols=176 Identities=19% Similarity=0.204 Sum_probs=97.8
Q ss_pred CceecchhhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHHHHHHHHH
Q 002362 170 EEICGRVDEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEFRVAKAIV 249 (930)
Q Consensus 170 ~~~vGr~~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~~~~i~ 249 (930)
++++|.+..++++..++...... +...+-+.++|++|+||||+|+.+++. .. ++ .+.++.+......++. .++
T Consensus 9 ~divGqe~~~~~l~~~i~~~~~~-~~~~~~~L~~GPpGtGKT~lA~~la~~--~~--~~-~~~~~~~~~~~~~~~~-~~~ 81 (238)
T d1in4a2 9 DEFIGQENVKKKLSLALEAAKMR-GEVLDHVLLAGPPGLGKTTLAHIIASE--LQ--TN-IHVTSGPVLVKQGDMA-AIL 81 (238)
T ss_dssp GGCCSCHHHHHHHHHHHHHHHHH-TCCCCCEEEESSTTSSHHHHHHHHHHH--HT--CC-EEEEETTTCCSHHHHH-HHH
T ss_pred HHcCChHHHHHHHHHHHHHHHhc-CCCCCeEEEECCCCCcHHHHHHHHHhc--cC--CC-cccccCcccccHHHHH-HHH
Confidence 56899999999998887532110 123455789999999999999999873 22 22 3344444433332221 111
Q ss_pred HHhcCCCCCCccHHHHHHHHHHHhcCceEEEEEeCccccCccChhhhhhhhcc------------------CCCCcEEEE
Q 002362 250 EALDGHESRLGEFQSLIKHIYESVAGMCFLLVLDDVWDGNYMKWEPFFHCLKN------------------GLHRSKILV 311 (930)
Q Consensus 250 ~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~~------------------~~~gs~iiv 311 (930)
.. .+++..+++|.+.......-+.+...... ..+...+|.
T Consensus 82 ~~----------------------~~~~~~~~ide~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~ 139 (238)
T d1in4a2 82 TS----------------------LERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVG 139 (238)
T ss_dssp HH----------------------CCTTCEEEEETGGGCCHHHHHHHHHHHHTSCCCC---------------CCCEEEE
T ss_pred Hh----------------------hccCCchHHHHHHHhhhHHHhhcccceeeeeeeeeecCcccccccccCCCCeEEEE
Confidence 11 23344566676654321110111111110 112344555
Q ss_pred EcCCh-HHHh--hhCCcceEeCCCCChHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHHHcCCchhHHHH
Q 002362 312 TTRKK-SVAS--MMGSTNIISIKELTEEECRLLFNKIAFSDRPIEEREKLEQIGRKIANKCKGLPLAAKI 378 (930)
Q Consensus 312 Ttr~~-~v~~--~~~~~~~~~l~~L~~~~~~~lf~~~~~~~~~~~~~~~l~~~~~~i~~~c~glPLai~~ 378 (930)
+|... .... .......+.+++.+.++...++...+........ .+....|++.++|.+-.+..
T Consensus 140 at~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~l~~i~~~s~gd~R~ai~ 205 (238)
T d1in4a2 140 ATTRSGLLSSPLRSRFGIILELDFYTVKELKEIIKRAASLMDVEIE----DAAAEMIAKRSRGTPRIAIR 205 (238)
T ss_dssp EESCGGGSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHTTCCBC----HHHHHHHHHTSTTCHHHHHH
T ss_pred ecCCCccccccceeeeeEEEEecCCCHHHHHHHHHHhhhhccchhh----HHHHHHHHHhCCCCHHHHHH
Confidence 55443 3221 1223456799999999999999887654333222 23477788999998765543
No 53
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=98.17 E-value=1.5e-05 Score=76.68 Aligned_cols=132 Identities=23% Similarity=0.283 Sum_probs=81.1
Q ss_pred eEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHhcCc
Q 002362 197 LHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEFRVAKAIVEALDGHESRLGEFQSLIKHIYESVAGM 276 (930)
Q Consensus 197 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~l~~~l~~k 276 (930)
...+.|+|..|+|||.|++.+++. .......+++++.. ++...+...+... ...+ +.+.+++
T Consensus 36 ~n~l~l~G~~G~GKTHLl~A~~~~--~~~~~~~~~~~~~~------~~~~~~~~~~~~~-----~~~~----~~~~~~~- 97 (213)
T d1l8qa2 36 YNPIFIYGSVGTGKTHLLQAAGNE--AKKRGYRVIYSSAD------DFAQAMVEHLKKG-----TINE----FRNMYKS- 97 (213)
T ss_dssp CSSEEEECSSSSSHHHHHHHHHHH--HHHTTCCEEEEEHH------HHHHHHHHHHHHT-----CHHH----HHHHHHT-
T ss_pred CCcEEEECCCCCcHHHHHHHHHHH--hccCccceEEechH------HHHHHHHHHHHcc-----chhh----HHHHHhh-
Confidence 345889999999999999999994 45555566676543 3444444444221 1222 2222332
Q ss_pred eEEEEEeCccccC-ccChhh-hhhhhcc-CCCCcEEEEEcCCh---------HHHhhhCCcceEeCCCCChHHHHHHHHH
Q 002362 277 CFLLVLDDVWDGN-YMKWEP-FFHCLKN-GLHRSKILVTTRKK---------SVASMMGSTNIISIKELTEEECRLLFNK 344 (930)
Q Consensus 277 r~LlVlDdv~~~~-~~~~~~-l~~~l~~-~~~gs~iivTtr~~---------~v~~~~~~~~~~~l~~L~~~~~~~lf~~ 344 (930)
--+|++||+.... ...|+. +...+.. ...|..||+||+.. +....+.....++++ +++++..+++++
T Consensus 98 ~dll~iDDi~~i~~~~~~~~~lf~lin~~~~~~~~iiits~~~p~~l~~~~~dL~SRL~~g~~~~i~-p~d~~~~~iL~~ 176 (213)
T d1l8qa2 98 VDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEIE-LDNKTRFKIIKE 176 (213)
T ss_dssp CSEEEEECGGGGTTCHHHHHHHHHHHHHHHHTTCEEEEEESSCGGGCTTSCHHHHHHHHTSEEEECC-CCHHHHHHHHHH
T ss_pred ccchhhhhhhhhcCchHHHHHHHHHHHHHhhccceEEEecCCcchhccccchHHHHHhhCceEEEEC-CCcHHHHHHHHH
Confidence 2489999997542 234554 3333322 23567899999854 233445556678886 477777778877
Q ss_pred HHc
Q 002362 345 IAF 347 (930)
Q Consensus 345 ~~~ 347 (930)
++-
T Consensus 177 ~a~ 179 (213)
T d1l8qa2 177 KLK 179 (213)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 54
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=98.14 E-value=2.4e-05 Score=81.85 Aligned_cols=153 Identities=17% Similarity=0.188 Sum_probs=90.2
Q ss_pred ceecchhhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHH----HHhcCCeEEEE-EeCCCccHHHHH
Q 002362 171 EICGRVDEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEE----VKRKFDKILWV-CVSETFEEFRVA 245 (930)
Q Consensus 171 ~~vGr~~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~----~~~~F~~~~wv-~vs~~~~~~~~~ 245 (930)
.++||++++++++..|.... -.-+.+||.+|+|||+++..++..-. ...-.+.++|. .++. ++
T Consensus 23 ~~~gr~~ei~~~~~~L~r~~------k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~~~------l~ 90 (387)
T d1qvra2 23 PVIGRDEEIRRVIQILLRRT------KNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGS------LL 90 (387)
T ss_dssp CCCSCHHHHHHHHHHHHCSS------CCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC----------
T ss_pred CCcCcHHHHHHHHHHHhcCC------CCCCeEECCCCCCHHHHHHHHHHHHHhCCCCHHHcCceEEEeeHhh------hh
Confidence 47899999999999998543 23357889999999999877766311 11123455553 3321 10
Q ss_pred HHHHHHhcCCCCCCccHHHHHHHHHHHh-c-CceEEEEEeCcccc--------CccChhhhhhhhccCCCCcEEEEEcCC
Q 002362 246 KAIVEALDGHESRLGEFQSLIKHIYESV-A-GMCFLLVLDDVWDG--------NYMKWEPFFHCLKNGLHRSKILVTTRK 315 (930)
Q Consensus 246 ~~i~~~l~~~~~~~~~~~~~~~~l~~~l-~-~kr~LlVlDdv~~~--------~~~~~~~l~~~l~~~~~gs~iivTtr~ 315 (930)
.......+.++....+...+ . ...++|++|++..- ..+.-.-++++|..+ .-++|-||..
T Consensus 91 --------ag~~~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~rg--~~~~I~~tT~ 160 (387)
T d1qvra2 91 --------AGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALARG--ELRLIGATTL 160 (387)
T ss_dssp ---------------CHHHHHHHHHHHHHTTCSSEEEEECCC-------------------HHHHHTT--CCCEEEEECH
T ss_pred --------cccCcchhHHHHHHHHHHHhccCCCceEEEeccHHHHhcCCCCCCcccHHHHHHHHHhCC--CcceeeecCH
Confidence 11112234555555555444 3 34789999999652 112223455556554 3568888877
Q ss_pred hHHHhhhCC-------cceEeCCCCChHHHHHHHHHHH
Q 002362 316 KSVASMMGS-------TNIISIKELTEEECRLLFNKIA 346 (930)
Q Consensus 316 ~~v~~~~~~-------~~~~~l~~L~~~~~~~lf~~~~ 346 (930)
.+... +.. .+.+.+.+.+.+++..++....
T Consensus 161 ~ey~~-~e~d~al~rrF~~v~v~ep~~~~~~~il~~~~ 197 (387)
T d1qvra2 161 DEYRE-IEKDPALERRFQPVYVDEPTVEETISILRGLK 197 (387)
T ss_dssp HHHHH-HTTCTTTCSCCCCEEECCCCHHHHHHHHHHHH
T ss_pred HHHHH-hcccHHHHHhcccccCCCCcHHHHHHHHHHHH
Confidence 76643 322 4689999999999999987654
No 55
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=97.99 E-value=2.9e-05 Score=76.63 Aligned_cols=179 Identities=13% Similarity=0.089 Sum_probs=98.0
Q ss_pred CceecchhhHHHHHHH---hccCC---CCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHHH
Q 002362 170 EEICGRVDEKNELLSK---LLCES---SDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEFR 243 (930)
Q Consensus 170 ~~~vGr~~~~~~l~~~---L~~~~---~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~ 243 (930)
.+++|.++.+++|.+. +.... .-+....+-+.++|++|+|||++|+.+++. ...+ .+-|..++-.+
T Consensus 12 ~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~--~~~~---~~~i~~~~l~~--- 83 (256)
T d1lv7a_ 12 ADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGE--AKVP---FFTISGSDFVE--- 83 (256)
T ss_dssp GGSCSCHHHHHHTHHHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHH--HTCC---EEEECSCSSTT---
T ss_pred HHHhchHHHHHHHHHHHHHHHCHHHHHHcCCCCCCeEEeeCCCCCCccHHHHHHHHH--cCCC---EEEEEhHHhhh---
Confidence 5789998777777543 32211 001234567889999999999999999873 3211 22333332111
Q ss_pred HHHHHHHHhcCCCCCCccHHHHHHHHHHHhcCceEEEEEeCcccc------Cc----cCh----hhhhhhhcc--CCCCc
Q 002362 244 VAKAIVEALDGHESRLGEFQSLIKHIYESVAGMCFLLVLDDVWDG------NY----MKW----EPFFHCLKN--GLHRS 307 (930)
Q Consensus 244 ~~~~i~~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~------~~----~~~----~~l~~~l~~--~~~gs 307 (930)
.. .......+...+...-+..+.+|++||++.- .. ... ..+...+.. ...+.
T Consensus 84 -----------~~-~g~~~~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~v 151 (256)
T d1lv7a_ 84 -----------MF-VGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGI 151 (256)
T ss_dssp -----------SC-CCCCHHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCSSSCE
T ss_pred -----------cc-hhHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCCE
Confidence 00 0111223333344444577789999999531 00 111 123333322 23344
Q ss_pred EEEEEcCChHHH-hhh---C-CcceEeCCCCChHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHHHcCCch
Q 002362 308 KILVTTRKKSVA-SMM---G-STNIISIKELTEEECRLLFNKIAFSDRPIEEREKLEQIGRKIANKCKGLP 373 (930)
Q Consensus 308 ~iivTtr~~~v~-~~~---~-~~~~~~l~~L~~~~~~~lf~~~~~~~~~~~~~~~l~~~~~~i~~~c~glP 373 (930)
-||.||...... ..+ + -...+++.+.+.++..++|+...-+.. .....+ ...+++.+.|..
T Consensus 152 ~vIatTn~~~~ld~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~~-~~~~~~----~~~la~~t~G~s 217 (256)
T d1lv7a_ 152 IVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVP-LAPDID----AAIIARGTPGFS 217 (256)
T ss_dssp EEEEEESCTTTSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTSC-BCTTCC----HHHHHHTCTTCC
T ss_pred EEEEeCCCcccCCHhHcCCCCCCEEEECCCcCHHHHHHHHHHhccCCC-cCcccC----HHHHHHhCCCCC
Confidence 456577764322 222 1 256899999999999999987763322 111222 345777888864
No 56
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=97.98 E-value=2.9e-05 Score=76.39 Aligned_cols=178 Identities=14% Similarity=0.161 Sum_probs=94.1
Q ss_pred CceecchhhHHHHHHH---hccCC---CCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHHH
Q 002362 170 EEICGRVDEKNELLSK---LLCES---SDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEFR 243 (930)
Q Consensus 170 ~~~vGr~~~~~~l~~~---L~~~~---~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~ 243 (930)
.+++|-++.+++|.+. +..+. .-+....+-+.++|++|+|||+||+.+++. .. . ..+.+..+ .
T Consensus 9 ~di~G~~~~k~~l~~~i~~l~~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~--~~--~-~~~~i~~~------~ 77 (247)
T d1ixza_ 9 KDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGE--AR--V-PFITASGS------D 77 (247)
T ss_dssp GGCCSCHHHHHHHHHHHHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHH--TT--C-CEEEEEHH------H
T ss_pred HHHccHHHHHHHHHHHHHHHHCHHHHHHcCCCCCceEEEecCCCCChhHHHHHHHHH--cC--C-CEEEEEhH------H
Confidence 4689988777665543 32211 001234567899999999999999999973 22 1 12233321 1
Q ss_pred HHHHHHHHhcCCCCCCccHHHHHHHHH-HHhcCceEEEEEeCcccc------Ccc--------Chhhhhhhhcc--CCCC
Q 002362 244 VAKAIVEALDGHESRLGEFQSLIKHIY-ESVAGMCFLLVLDDVWDG------NYM--------KWEPFFHCLKN--GLHR 306 (930)
Q Consensus 244 ~~~~i~~~l~~~~~~~~~~~~~~~~l~-~~l~~kr~LlVlDdv~~~------~~~--------~~~~l~~~l~~--~~~g 306 (930)
+. .. . ..+.......+. ..-...+.+|++||++.- ... ....+...+.. ...+
T Consensus 78 l~----~~----~--~g~~~~~l~~~f~~a~~~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~ 147 (247)
T d1ixza_ 78 FV----EM----F--VGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKDTA 147 (247)
T ss_dssp HH----HS----C--TTHHHHHHHHHHHHHTTSSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCTTCC
T ss_pred hh----hc----c--ccHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCC
Confidence 11 11 1 111222223333 333567889999999531 000 01122222222 1222
Q ss_pred cEEEEEcCChH-HHhhh---C-CcceEeCCCCChHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHHHcCCch
Q 002362 307 SKILVTTRKKS-VASMM---G-STNIISIKELTEEECRLLFNKIAFSDRPIEEREKLEQIGRKIANKCKGLP 373 (930)
Q Consensus 307 s~iivTtr~~~-v~~~~---~-~~~~~~l~~L~~~~~~~lf~~~~~~~~~~~~~~~l~~~~~~i~~~c~glP 373 (930)
.-||.||.... +...+ + -...+++.+.+.++..++|+........ ....+ ...+++.|.|..
T Consensus 148 vivi~tTn~~~~ld~al~R~~Rf~~~i~~~~P~~~eR~~il~~~l~~~~~-~~~~~----~~~la~~t~g~s 214 (247)
T d1ixza_ 148 IVVMAATNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPL-AEDVD----LALLAKRTPGFV 214 (247)
T ss_dssp EEEEEEESCGGGSCGGGGSTTSSCEEEECCSCCHHHHHHHHHHHHTTSCB-CTTCC----HHHHHHTCTTCC
T ss_pred EEEEEeCCCccccCHhHcCCCCCcEEEEECCcCHHHHHHHHHHHhcccCC-ccccC----HHHHHHHCCCCC
Confidence 23344666543 22222 1 2568999999999999999887643321 12222 345677787753
No 57
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.93 E-value=5.9e-05 Score=74.93 Aligned_cols=179 Identities=11% Similarity=0.050 Sum_probs=99.4
Q ss_pred CceecchhhHHHHHHHhcc----CC---CCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHH
Q 002362 170 EEICGRVDEKNELLSKLLC----ES---SDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEF 242 (930)
Q Consensus 170 ~~~vGr~~~~~~l~~~L~~----~~---~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~ 242 (930)
+++.|-++.+++|.+.+.. +. ..+-...+-+.++|++|+|||++|+.+++. ...+ .+.+..+.
T Consensus 4 ~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~~ala~~--~~~~---~~~i~~~~----- 73 (258)
T d1e32a2 4 DDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE--TGAF---FFLINGPE----- 73 (258)
T ss_dssp GGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHHHHH--TTCE---EEEECHHH-----
T ss_pred hhhccHHHHHHHHHHHHHHHhcCHHHHHhCCCCCCceeEEecCCCCCchHHHHHHHHH--hCCe---EEEEEchh-----
Confidence 4588999888888776421 10 001234567899999999999999999872 2222 22222111
Q ss_pred HHHHHHHHHhcCCCCCCccHHHHHHHHHHHhcCceEEEEEeCccccC-------ccChhhh----hhhhcc--CCCCcEE
Q 002362 243 RVAKAIVEALDGHESRLGEFQSLIKHIYESVAGMCFLLVLDDVWDGN-------YMKWEPF----FHCLKN--GLHRSKI 309 (930)
Q Consensus 243 ~~~~~i~~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~-------~~~~~~l----~~~l~~--~~~gs~i 309 (930)
+.... .......+...+...-..++.+|++||++.-- ......+ ...+.. ...+.-|
T Consensus 74 ---------l~~~~-~g~~~~~l~~~f~~A~~~~p~il~iDeid~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~vlv 143 (258)
T d1e32a2 74 ---------IMSKL-AGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIV 143 (258)
T ss_dssp ---------HTTSC-TTHHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCCCSSCEEE
T ss_pred ---------hcccc-cccHHHHHHHHHHHHHhcCCeEEEehhhhhhccCCCCCCCchHHHHHHHhccccccccccCCccE
Confidence 11111 11112223333334445788999999996521 1112212 221222 2234445
Q ss_pred EEEcCChHHHh-hh----CCcceEeCCCCChHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHHHcCCch
Q 002362 310 LVTTRKKSVAS-MM----GSTNIISIKELTEEECRLLFNKIAFSDRPIEEREKLEQIGRKIANKCKGLP 373 (930)
Q Consensus 310 ivTtr~~~v~~-~~----~~~~~~~l~~L~~~~~~~lf~~~~~~~~~~~~~~~l~~~~~~i~~~c~glP 373 (930)
|.||....-.. .+ .-...++++..+.++..++|+...-+. ......+ ...|++.+.|.-
T Consensus 144 i~tTn~~~~ld~al~r~gRfd~~i~~~~P~~~~R~~il~~~l~~~-~~~~~~~----~~~la~~t~G~s 207 (258)
T d1e32a2 144 MAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM-KLADDVD----LEQVANETHGHV 207 (258)
T ss_dssp EEEESCGGGSCGGGTSTTSSCEEEECCCCCHHHHHHHHHHTTTTS-CBCTTCC----HHHHHHHCTTCC
T ss_pred EEeCCCccccchhhhhcccccceeECCCCCHHHHHHHhhhhccCc-ccccccc----hhhhhhcccCCC
Confidence 66887654321 22 135789999999999999998765322 2111112 356888888854
No 58
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.83 E-value=3.6e-06 Score=77.46 Aligned_cols=88 Identities=14% Similarity=0.121 Sum_probs=61.1
Q ss_pred HHHHhhcCCcceEEEcCCcccccCCCCCcccCcccccCCCCCeeeccCCccccccc-ccccCCcccEEeccCCCCCcccc
Q 002362 574 LERLFRESTSLRVLEFGDWARSLQLGPLTRIPRNIERLVHLRYLNLSNQSIRKLPD-TLCELYNLQKLDISCCCKLKELP 652 (930)
Q Consensus 574 ~~~~~~~~~~Lr~L~L~~~~~~~~~~~~~~lp~~i~~L~~Lr~L~L~~~~i~~lp~-~i~~L~~L~~L~l~~~~~~~~lp 652 (930)
+..++..++.|++|+|++|... .+..++..+..+++|++|+|++|.|+.++. ......+|+.|++++|.......
T Consensus 57 l~~~~~~~~~L~~L~Ls~N~i~----~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~ 132 (162)
T d1koha1 57 LRIIEENIPELLSLNLSNNRLY----RLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFR 132 (162)
T ss_dssp HHHHHHHCTTCCCCCCCSSCCC----CCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSS
T ss_pred hHHHHHhCCCCCEeeCCCcccc----CCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcc
Confidence 4555678899999999977655 555566777888999999999999888765 22334568888888887333222
Q ss_pred c-------cccccCCcceEe
Q 002362 653 Q-------GIGKLINMRHLL 665 (930)
Q Consensus 653 ~-------~i~~L~~L~~L~ 665 (930)
. .+..+++|+.||
T Consensus 133 ~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 133 DQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp SHHHHHHHHHTTSTTCCEET
T ss_pred cchhHHHHHHHHCCCCCEEC
Confidence 1 134566666664
No 59
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=97.79 E-value=0.0001 Score=72.35 Aligned_cols=155 Identities=20% Similarity=0.191 Sum_probs=78.8
Q ss_pred CceecchhhHHHHHHHhc------cCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHHH
Q 002362 170 EEICGRVDEKNELLSKLL------CESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEFR 243 (930)
Q Consensus 170 ~~~vGr~~~~~~l~~~L~------~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~ 243 (930)
..+||..+.++.+++... .... ..+.+-|.++|++|+|||++|+.+++. ...+| +.+..+...
T Consensus 9 ~~~i~~~~~i~~i~~~~~~~~~~~~~~~--~~p~~~vLL~GppGtGKT~la~alA~~--~~~~~---~~i~~~~~~---- 77 (246)
T d1d2na_ 9 NGIIKWGDPVTRVLDDGELLVQQTKNSD--RTPLVSVLLEGPPHSGKTALAAKIAEE--SNFPF---IKICSPDKM---- 77 (246)
T ss_dssp TCCCCCSHHHHHHHHHHHHHHHHHHHCS--SCSEEEEEEECSTTSSHHHHHHHHHHH--HTCSE---EEEECGGGC----
T ss_pred cCCcCcCHHHHHHHHHHHHHHHHHhccC--CCCCeEEEEECcCCCCHHHHHHHHhhc--ccccc---ccccccccc----
Confidence 347887776666655443 1111 235677899999999999999999883 32222 233332211
Q ss_pred HHHHHHHHhcCCCCCCccHHHHHHHHHHHhcCceEEEEEeCcccc------Ccc----ChhhhhhhhccC-CCCcE--EE
Q 002362 244 VAKAIVEALDGHESRLGEFQSLIKHIYESVAGMCFLLVLDDVWDG------NYM----KWEPFFHCLKNG-LHRSK--IL 310 (930)
Q Consensus 244 ~~~~i~~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~------~~~----~~~~l~~~l~~~-~~gs~--ii 310 (930)
.+ .........+...+....+..+.+|++|+++.- ... ....+...+... ..+.+ ||
T Consensus 78 ---------~g-~~~~~~~~~i~~if~~A~~~~p~il~iDEid~l~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~v~vi 147 (246)
T d1d2na_ 78 ---------IG-FSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLII 147 (246)
T ss_dssp ---------TT-CCHHHHHHHHHHHHHHHHTSSEEEEEECCHHHHTTCBTTTTBCCHHHHHHHHHHTTCCCSTTCEEEEE
T ss_pred ---------cc-ccccchhhhhhhhhhhhhhcccceeehhhhhhHhhhcccccchhHHHHHHHHHHhcCCCccccceeee
Confidence 00 000001111222333444567889999999531 000 012233333222 23444 45
Q ss_pred EEcCChHHHhhh---CC-cceEeCCCCC-hHHHHHHHHHH
Q 002362 311 VTTRKKSVASMM---GS-TNIISIKELT-EEECRLLFNKI 345 (930)
Q Consensus 311 vTtr~~~v~~~~---~~-~~~~~l~~L~-~~~~~~lf~~~ 345 (930)
.||......... +. ...+++..++ .++-++.+...
T Consensus 148 ~tTn~~~~ld~~~~~~rF~~~i~~P~~~~r~~il~~l~~~ 187 (246)
T d1d2na_ 148 GTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLLEALELL 187 (246)
T ss_dssp EEESCHHHHHHTTCTTTSSEEEECCCEEEHHHHHHHHHHH
T ss_pred eccCChhhccchhhcCccceEEecCCchhHHHHHHHHHhc
Confidence 577776554432 11 3456775554 34455555443
No 60
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.57 E-value=0.00017 Score=71.78 Aligned_cols=180 Identities=14% Similarity=0.089 Sum_probs=95.5
Q ss_pred CceecchhhHHHHHHHhccC----C---CCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHH
Q 002362 170 EEICGRVDEKNELLSKLLCE----S---SDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEF 242 (930)
Q Consensus 170 ~~~vGr~~~~~~l~~~L~~~----~---~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~ 242 (930)
.+++|-++.+++|.+.+... . ..+-...+-|.++|++|.|||+||+.+++. . ...+ +.++ ..
T Consensus 7 ~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~Gp~GtGKT~l~~ala~~--~----~~~~-~~~~----~~ 75 (265)
T d1r7ra3 7 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE--C----QANF-ISIK----GP 75 (265)
T ss_dssp SSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHHHHHHHH--T----TCEE-EEEC----HH
T ss_pred HHhcCHHHHHHHHHHHHHHHhhCHHHHHhCCCCCCCeEEEECCCCCcchhHHHHHHHH--h----CCcE-EEEE----HH
Confidence 45778877766666654211 0 001234567889999999999999999873 3 2222 2222 11
Q ss_pred HHHHHHHHHhcCCCCCCccHHHHHHHHHHHhcCceEEEEEeCccccCc------cCh--------hhhhhhhcc--CCCC
Q 002362 243 RVAKAIVEALDGHESRLGEFQSLIKHIYESVAGMCFLLVLDDVWDGNY------MKW--------EPFFHCLKN--GLHR 306 (930)
Q Consensus 243 ~~~~~i~~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~------~~~--------~~l~~~l~~--~~~g 306 (930)
.+ . ... .......+...+...-...+.+|++||++.--. ..+ ..+...+.. ..++
T Consensus 76 ~l----~----~~~-~~~~~~~l~~~f~~A~~~~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~ 146 (265)
T d1r7ra3 76 EL----L----TMW-FGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKN 146 (265)
T ss_dssp HH----H----TSC-TTTHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC------C
T ss_pred Hh----h----hcc-ccchHHHHHHHHHHHHhcCCcceeHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhhCcCCCCC
Confidence 11 1 111 111223333334444457789999999964210 111 112222221 1234
Q ss_pred cEEEEEcCChH-HHhhh---C-CcceEeCCCCChHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHHHcCCchh
Q 002362 307 SKILVTTRKKS-VASMM---G-STNIISIKELTEEECRLLFNKIAFSDRPIEEREKLEQIGRKIANKCKGLPL 374 (930)
Q Consensus 307 s~iivTtr~~~-v~~~~---~-~~~~~~l~~L~~~~~~~lf~~~~~~~~~~~~~~~l~~~~~~i~~~c~glPL 374 (930)
--||.||...+ +-..+ + -...++++..+.++..++|+...-. ......-+ ..++++++.|..-
T Consensus 147 v~vi~ttn~~~~ld~al~r~gRf~~~i~~~~p~~~~R~~il~~~l~~-~~~~~~~~----l~~la~~t~g~s~ 214 (265)
T d1r7ra3 147 VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK-SPVAKDVD----LEFLAKMTNGFSG 214 (265)
T ss_dssp CEEEECCBSCTTTSCGGGSSTTSEEEEECCCCCCHHHHHHHHHHTTC-C----CCC----CHHHHHHHCSSCC
T ss_pred EEEEEeCCCchhCCHHHhCCCCccEEEEecchHHHHHHHHHHHHhcc-CCchhhhh----HHHHHhcCCCCCH
Confidence 45667777543 22222 1 2568999999999999999876432 11111112 3557778887653
No 61
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.38 E-value=2.2e-05 Score=72.02 Aligned_cols=83 Identities=25% Similarity=0.176 Sum_probs=57.1
Q ss_pred ccCCCCCeeeccCCcccccc---cccccCCcccEEeccCCCCCccccc-cccccCCcceEeecCcccccccCC-------
Q 002362 609 ERLVHLRYLNLSNQSIRKLP---DTLCELYNLQKLDISCCCKLKELPQ-GIGKLINMRHLLNYGTISLRYMPV------- 677 (930)
Q Consensus 609 ~~L~~Lr~L~L~~~~i~~lp---~~i~~L~~L~~L~l~~~~~~~~lp~-~i~~L~~L~~L~l~~~~~~~~~p~------- 677 (930)
..+++|++|+|++|.|+.++ ..+..+++|++|++++|. +..++. ...+..+|+.|++++|+.......
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~-i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~ 140 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNE-LKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISA 140 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSC-CCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHH
T ss_pred HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCc-cccchhhhhhhccccceeecCCCCcCcCcccchhHHHH
Confidence 46788999999999888653 446678899999999887 666665 223445788888888854332221
Q ss_pred cCCCCCCCCcCCceE
Q 002362 678 GIGRLTSLRTLDEFY 692 (930)
Q Consensus 678 ~i~~l~~L~~L~~~~ 692 (930)
-+..+++|+.|+...
T Consensus 141 i~~~~P~L~~LDg~~ 155 (162)
T d1koha1 141 IRERFPKLLRLDGHE 155 (162)
T ss_dssp HHTTSTTCCEETTEE
T ss_pred HHHHCCCCCEECcCC
Confidence 145677777777543
No 62
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=97.24 E-value=0.001 Score=62.48 Aligned_cols=120 Identities=11% Similarity=-0.017 Sum_probs=73.6
Q ss_pred CeEEEEEEecCCChHHHHHHHHhchHHHHhcCC---eEEEEEeCC-CccHHHHHHHHHHHhcCCCCCCccHHHHHHHHHH
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNHEEVKRKFD---KILWVCVSE-TFEEFRVAKAIVEALDGHESRLGEFQSLIKHIYE 271 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~---~~~wv~vs~-~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~l~~ 271 (930)
...-+.++|.+|+||||+|..+.+. +...+. -++++.... ...+.++ +++.+.+....
T Consensus 14 ~~~~~l~~G~~g~gk~~~a~~l~~~--i~~~~~~h~D~~~i~~~~~~I~Id~I-R~i~~~~~~~~--------------- 75 (198)
T d2gnoa2 14 EGISILINGEDLSYPREVSLELPEY--VEKFPPKASDVLEIDPEGENIGIDDI-RTIKDFLNYSP--------------- 75 (198)
T ss_dssp SSEEEEEECSSSSHHHHHHHHHHHH--HHTSCCCTTTEEEECCSSSCBCHHHH-HHHHHHHTSCC---------------
T ss_pred CCceEEEECCCCCCHHHHHHHHHHH--HhccccCCCCEEEEeCCcCCCCHHHH-HHHHHHHhhCc---------------
Confidence 5778999999999999999998873 322211 234443221 2223322 22333332211
Q ss_pred HhcCceEEEEEeCccccCccChhhhhhhhccCCCCcEEEEEcCCh-HHHhhh-CCcceEeCCCCC
Q 002362 272 SVAGMCFLLVLDDVWDGNYMKWEPFFHCLKNGLHRSKILVTTRKK-SVASMM-GSTNIISIKELT 334 (930)
Q Consensus 272 ~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~iivTtr~~-~v~~~~-~~~~~~~l~~L~ 334 (930)
..+++=++|+|+++..+...+..++..+-...+++.+|++|.+. .+...+ .-...+.+.+..
T Consensus 76 -~~~~~KviIId~ad~l~~~aqNaLLK~LEEPp~~t~fiLit~~~~~ll~TI~SRC~~i~~~~p~ 139 (198)
T d2gnoa2 76 -ELYTRKYVIVHDCERMTQQAANAFLKALEEPPEYAVIVLNTRRWHYLLPTIKSRVFRVVVNVPK 139 (198)
T ss_dssp -SSSSSEEEEETTGGGBCHHHHHHTHHHHHSCCTTEEEEEEESCGGGSCHHHHTTSEEEECCCCH
T ss_pred -ccCCCEEEEEeCccccchhhhhHHHHHHhCCCCCceeeeccCChhhCHHHHhcceEEEeCCCch
Confidence 12444589999999888888888888887777778877666654 333332 235567776543
No 63
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=97.22 E-value=0.00037 Score=70.88 Aligned_cols=136 Identities=14% Similarity=0.232 Sum_probs=73.2
Q ss_pred ceecchhhHHHHHHHhccC---CCCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHHHHHHH
Q 002362 171 EICGRVDEKNELLSKLLCE---SSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEFRVAKA 247 (930)
Q Consensus 171 ~~vGr~~~~~~l~~~L~~~---~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~~~~ 247 (930)
.++|.++.++.|...+... -.+......++.++|+.|+|||.+|+.++.. +-..-...+-+..+.-.+...+..
T Consensus 24 ~v~GQ~~ai~~v~~~i~~~~~~l~~~~kp~~~~lf~Gp~G~GKt~lak~la~~--l~~~~~~~~~~~~~~~~~~~~~~~- 100 (315)
T d1qvra3 24 RVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAAT--LFDTEEAMIRIDMTEYMEKHAVSR- 100 (315)
T ss_dssp HSCSCHHHHHHHHHHHHHHGGGCSCSSSCSEEEEEBSCSSSSHHHHHHHHHHH--HHSSGGGEEEECTTTCCSSGGGGG-
T ss_pred eEeCHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEECCCcchHHHHHHHHHHH--hcCCCcceEEEeccccccchhhhh-
Confidence 4778888888887765421 1111345568899999999999999998873 311112233333333222111100
Q ss_pred HHHHhcCC--CCCCccHHHHHHHHHHHhcCceEEEEEeCccccCccChhhhhhhhccC----C-------CCcEEEEEcC
Q 002362 248 IVEALDGH--ESRLGEFQSLIKHIYESVAGMCFLLVLDDVWDGNYMKWEPFFHCLKNG----L-------HRSKILVTTR 314 (930)
Q Consensus 248 i~~~l~~~--~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~~~----~-------~gs~iivTtr 314 (930)
+ ++.. ..+......+...+. +....+++||+++.....-+..+...+..+ . .++-||+||.
T Consensus 101 L---~g~~~gyvG~~~~~~l~~~~~---~~p~~Vvl~DEieK~~~~v~~~ll~~l~~g~~~~~~gr~v~~~~~i~i~tsn 174 (315)
T d1qvra3 101 L---IGAPPGYVGYEEGGQLTEAVR---RRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSN 174 (315)
T ss_dssp C-----------------CHHHHHH---HCSSEEEEESSGGGSCHHHHHHHHHHHTTTEECCSSSCCEECTTEEEEEECC
T ss_pred h---cCCCCCCcCcccCChHHHHHH---hCCCcEEEEehHhhcCHHHHHHHHHHhccCceeCCCCcEecCcceEEEEecc
Confidence 0 0110 000111112222232 345679999999987777777777666443 1 3455777777
Q ss_pred C
Q 002362 315 K 315 (930)
Q Consensus 315 ~ 315 (930)
-
T Consensus 175 l 175 (315)
T d1qvra3 175 L 175 (315)
T ss_dssp T
T ss_pred c
Confidence 4
No 64
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=97.00 E-value=0.00057 Score=69.60 Aligned_cols=134 Identities=17% Similarity=0.200 Sum_probs=75.2
Q ss_pred ceecchhhHHHHHHHhccC---CCCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHHHHHHH
Q 002362 171 EICGRVDEKNELLSKLLCE---SSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEFRVAKA 247 (930)
Q Consensus 171 ~~vGr~~~~~~l~~~L~~~---~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~~~~ 247 (930)
.++|.++.++.+...+... -.+......++.++|+.|+|||.||+.++. .. +...+-+..+.-.+...
T Consensus 23 ~viGQ~~a~~~v~~~v~~~~~~l~~~~~p~~~~lf~Gp~GvGKT~lak~la~--~l---~~~~i~~d~s~~~~~~~---- 93 (315)
T d1r6bx3 23 LVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSK--AL---GIELLRFDMSEYMERHT---- 93 (315)
T ss_dssp TSCSCHHHHHHHHHHHHHHHTTCSCTTSCSEEEEEECSTTSSHHHHHHHHHH--HH---TCEEEEEEGGGCSSSSC----
T ss_pred eecChHHHHHHHHHHHHHHHccCCCCCCCceEEEEECCCcchhHHHHHHHHh--hc---cCCeeEeccccccchhh----
Confidence 5789999888887766311 111134567899999999999999999986 22 33444444433111100
Q ss_pred HHHHhcCCCCCCccHHHHHHHHHHH-hcCceEEEEEeCccccCccChhhhhhhhccC-----------CCCcEEEEEcCC
Q 002362 248 IVEALDGHESRLGEFQSLIKHIYES-VAGMCFLLVLDDVWDGNYMKWEPFFHCLKNG-----------LHRSKILVTTRK 315 (930)
Q Consensus 248 i~~~l~~~~~~~~~~~~~~~~l~~~-l~~kr~LlVlDdv~~~~~~~~~~l~~~l~~~-----------~~gs~iivTtr~ 315 (930)
+..+-+........+ ....+... .+....+++||+++....+-|..+...+..| ...+-||.||..
T Consensus 94 -~~~l~g~~~gy~g~~-~~~~l~~~~~~~~~~vvl~DeieKa~~~V~~~lLqild~G~ltd~~Gr~vdf~n~iiI~Tsni 171 (315)
T d1r6bx3 94 -VSRLIGAPPGYVGFD-QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNA 171 (315)
T ss_dssp -CSSSCCCCSCSHHHH-HTTHHHHHHHHCSSEEEEEETGGGSCHHHHHHHHHHHHHSEEEETTTEEEECTTEEEEEEECS
T ss_pred -hhhhcccCCCccccc-cCChhhHHHHhCccchhhhcccccccchHhhhhHHhhccceecCCCCCccCccceEEEeccch
Confidence 001111111111001 01111222 2355679999999988777777777776432 134556777763
No 65
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=96.69 E-value=0.012 Score=57.01 Aligned_cols=45 Identities=27% Similarity=0.282 Sum_probs=35.3
Q ss_pred ceecchhhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhc
Q 002362 171 EICGRVDEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 171 ~~vGr~~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
+|||....++++.+.+..-.. .-.-|.|.|..|+|||++|+.+..
T Consensus 1 ~~v~~S~~~~~~~~~~~~~a~----~~~pvlI~Ge~GtGK~~~A~~ih~ 45 (247)
T d1ny5a2 1 EYVFESPKMKEILEKIKKISC----AECPVLITGESGVGKEVVARLIHK 45 (247)
T ss_dssp CCCCCSHHHHHHHHHHHHHTT----CCSCEEEECSTTSSHHHHHHHHHH
T ss_pred CeEecCHHHHHHHHHHHHHhC----CCCCEEEECCCCcCHHHHHHHHHH
Confidence 478888888888888765433 122478999999999999999975
No 66
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.69 E-value=0.00088 Score=61.18 Aligned_cols=116 Identities=12% Similarity=0.030 Sum_probs=55.7
Q ss_pred CCCccEEEEccccccccchhhhHHHHHhhcCCcceEEEcCCcccccCCCCCcccCcccccCCCCCeeeccCCccc-----
Q 002362 551 VKRMRSLIIDYSRYFHLYLNGKILERLFRESTSLRVLEFGDWARSLQLGPLTRIPRNIERLVHLRYLNLSNQSIR----- 625 (930)
Q Consensus 551 ~~~Lr~L~l~~~~~~~~~~~~~~~~~~~~~~~~Lr~L~L~~~~~~~~~~~~~~lp~~i~~L~~Lr~L~L~~~~i~----- 625 (930)
.++|+.|.++++..... .....+...+...+.|+.|+|++|... ......+...+...+.|++|+|++|.|+
T Consensus 14 ~~~L~~L~L~~~~~i~~-~~~~~l~~~L~~n~~L~~L~Ls~n~l~--~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~ 90 (167)
T d1pgva_ 14 DTDLKEVNINNMKRVSK-ERIRSLIEAACNSKHIEKFSLANTAIS--DSEARGLIELIETSPSLRVLNVESNFLTPELLA 90 (167)
T ss_dssp CSSCCEEECTTCCSSCH-HHHHHHHHHHTTCSCCCEEECTTSCCB--HHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred CCCCcEEEeCCCCCCCH-HHHHHHHHHHhhCCccceeeccccccc--hhHHHHHhhhhhhcccccceeeehhhcchHHHH
Confidence 45666666665321111 011112233555666777777754321 1112223334445566777777776655
Q ss_pred ccccccccCCcccEEeccCCCC--C-----ccccccccccCCcceEeecCc
Q 002362 626 KLPDTLCELYNLQKLDISCCCK--L-----KELPQGIGKLINMRHLLNYGT 669 (930)
Q Consensus 626 ~lp~~i~~L~~L~~L~l~~~~~--~-----~~lp~~i~~L~~L~~L~l~~~ 669 (930)
.+-..+...+.|++|++++|.. + ..+...+...+.|+.|+++.+
T Consensus 91 ~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~ 141 (167)
T d1pgva_ 91 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFA 141 (167)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCC
T ss_pred HHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCC
Confidence 2333455556666666665531 1 113333444555666655443
No 67
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=96.46 E-value=0.0062 Score=56.87 Aligned_cols=89 Identities=17% Similarity=0.165 Sum_probs=52.5
Q ss_pred CCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHH--HHHHHHHHHhcCCC---CCCccHHHHHHHH
Q 002362 195 KGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEF--RVAKAIVEALDGHE---SRLGEFQSLIKHI 269 (930)
Q Consensus 195 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~--~~~~~i~~~l~~~~---~~~~~~~~~~~~l 269 (930)
..+.||.++|+.|+||||.+-+++. +.+ .....+.+-..+.+... +-++..++.++.+. ....+........
T Consensus 7 ~~p~vi~lvGptGvGKTTTiAKLA~--~~~-~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~d~~~~l~~~ 83 (211)
T d2qy9a2 7 KAPFVILMVGVNGVGKTTTIGKLAR--QFE-QQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDA 83 (211)
T ss_dssp CTTEEEEEECCTTSCHHHHHHHHHH--HHH-TTTCCEEEECCCTTCHHHHHHHHHHHHHTTCCEECCSTTCCHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHH--HHH-HCCCcEEEEecccccccchhhhhhhhhhcCCcccccccCCCHHHHHHHH
Confidence 4678999999999999988777776 343 33445666555666553 44556666666542 2233444443333
Q ss_pred HHHhc-CceEEEEEeCcc
Q 002362 270 YESVA-GMCFLLVLDDVW 286 (930)
Q Consensus 270 ~~~l~-~kr~LlVlDdv~ 286 (930)
.+..+ ...=++++|=.-
T Consensus 84 ~~~a~~~~~d~ilIDTaG 101 (211)
T d2qy9a2 84 IQAAKARNIDVLIADTAG 101 (211)
T ss_dssp HHHHHHTTCSEEEECCCC
T ss_pred HHHHHHcCCCEEEeccCC
Confidence 33222 222367777663
No 68
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.33 E-value=0.00066 Score=62.06 Aligned_cols=97 Identities=14% Similarity=0.153 Sum_probs=63.3
Q ss_pred hHHHHHhhcCCcceEEEcCCcccccCCCCCcccCcccccCCCCCeeeccCCccc-----ccccccccCCcccEEeccCCC
Q 002362 572 KILERLFRESTSLRVLEFGDWARSLQLGPLTRIPRNIERLVHLRYLNLSNQSIR-----KLPDTLCELYNLQKLDISCCC 646 (930)
Q Consensus 572 ~~~~~~~~~~~~Lr~L~L~~~~~~~~~~~~~~lp~~i~~L~~Lr~L~L~~~~i~-----~lp~~i~~L~~L~~L~l~~~~ 646 (930)
+.+..+..+.+.|+.|+|+++... ....+..+-..+....+|++|+|++|.+. .+...+...+.|++|++++|.
T Consensus 5 ~~l~~l~~n~~~L~~L~L~~~~~i-~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~ 83 (167)
T d1pgva_ 5 SCINRLREDDTDLKEVNINNMKRV-SKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNF 83 (167)
T ss_dssp HHHHHHHTTCSSCCEEECTTCCSS-CHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSB
T ss_pred HHHHHHHhCCCCCcEEEeCCCCCC-CHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhh
Confidence 345666677899999999854321 11122334455667788999999999876 334455667888899998887
Q ss_pred CCcc----ccccccccCCcceEeecCc
Q 002362 647 KLKE----LPQGIGKLINMRHLLNYGT 669 (930)
Q Consensus 647 ~~~~----lp~~i~~L~~L~~L~l~~~ 669 (930)
.... +-..+...+.|++|+++++
T Consensus 84 i~~~g~~~l~~aL~~n~sL~~L~l~~n 110 (167)
T d1pgva_ 84 LTPELLARLLRSTLVTQSIVEFKADNQ 110 (167)
T ss_dssp CCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred cchHHHHHHHHHHHhCCcCCEEECCCC
Confidence 3221 3334555667777777665
No 69
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=96.21 E-value=0.0011 Score=67.21 Aligned_cols=49 Identities=27% Similarity=0.310 Sum_probs=34.5
Q ss_pred ceecchhhHHHHHHHhcc----C-CCC---CCCCeEEEEEEecCCChHHHHHHHHhc
Q 002362 171 EICGRVDEKNELLSKLLC----E-SSD---SPKGLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 171 ~~vGr~~~~~~l~~~L~~----~-~~~---~~~~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.++|.++.++.+...+.. . -.+ .....+-+.++|++|+|||.||+.+++
T Consensus 15 ~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~ 71 (309)
T d1ofha_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAK 71 (309)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHH
T ss_pred cccChHHHHHHHHHHHHHHHHHhccCCCCccCCCCceEEEECCCCCCHHHHHHHHhh
Confidence 478999888888765521 0 000 011346677899999999999999987
No 70
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.14 E-value=0.0042 Score=58.13 Aligned_cols=51 Identities=22% Similarity=0.229 Sum_probs=34.1
Q ss_pred HHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEE
Q 002362 179 KNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVC 234 (930)
Q Consensus 179 ~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~ 234 (930)
++.|.+...... ..+.-+|+|.|..|+||||||+.+.. ...........++
T Consensus 7 ~~~~~~~~~~~~---~~~~~iIgI~G~~GSGKSTla~~L~~--~l~~~~~~~~~~~ 57 (198)
T d1rz3a_ 7 IDFLCKTILAIK---TAGRLVLGIDGLSRSGKTTLANQLSQ--TLREQGISVCVFH 57 (198)
T ss_dssp HHHHHHHHHTSC---CSSSEEEEEEECTTSSHHHHHHHHHH--HHHHTTCCEEEEE
T ss_pred HHHHHHHHHhcc---CCCCEEEEEECCCCCCHHHHHHHHHH--Hhccccccceecc
Confidence 344444444333 34677999999999999999999987 4444444444444
No 71
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.09 E-value=0.0018 Score=59.90 Aligned_cols=37 Identities=14% Similarity=0.083 Sum_probs=28.0
Q ss_pred CCeEEEEEEecCCChHHHHHHHHhchHHHHh-cCCeEEEE
Q 002362 195 KGLHIISIIGMGGMGKTTLAQLACNHEEVKR-KFDKILWV 233 (930)
Q Consensus 195 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~-~F~~~~wv 233 (930)
..-.+|.|+|++|+||||+|+.+.. +... +++...++
T Consensus 4 ~~g~~I~l~G~~GsGKTTia~~La~--~L~~~~~~~~~~~ 41 (183)
T d1m8pa3 4 TQGFTIFLTGYMNSGKDAIARALQV--TLNQQGGRSVSLL 41 (183)
T ss_dssp TCCEEEEEECSTTSSHHHHHHHHHH--HHHHHCSSCEEEE
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHH--HHhhcCCCchhhh
Confidence 3557999999999999999999987 4443 34544444
No 72
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=96.06 E-value=0.0097 Score=58.09 Aligned_cols=85 Identities=19% Similarity=0.158 Sum_probs=59.5
Q ss_pred CCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHHHHHHHHHHHhcCCCC-----CCccHHHHHHHH
Q 002362 195 KGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEFRVAKAIVEALDGHES-----RLGEFQSLIKHI 269 (930)
Q Consensus 195 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~~~~i~~~l~~~~~-----~~~~~~~~~~~l 269 (930)
+.-+++-|+|.+|+||||+|..++... .+.=..++|+.....++.+ +++.++.... ...+.++..+.+
T Consensus 55 p~g~itei~G~~~sGKT~l~l~~~~~a--qk~g~~v~yiDtE~~~~~~-----~a~~~Gvd~d~i~~~~~~~~E~~~~~~ 127 (268)
T d1xp8a1 55 PRGRITEIYGPESGGKTTLALAIVAQA--QKAGGTCAFIDAEHALDPV-----YARALGVNTDELLVSQPDNGEQALEIM 127 (268)
T ss_dssp ETTSEEEEEESTTSSHHHHHHHHHHHH--HHTTCCEEEEESSCCCCHH-----HHHHTTCCGGGCEEECCSSHHHHHHHH
T ss_pred cCceEEEEecCCccchHHHHHHHHHHH--HhCCCEEEEEECCccCCHH-----HHHHhCCCchhEEEEcCCCHHHHHHHH
Confidence 345799999999999999999888743 3332568999999888875 5666665432 223456666655
Q ss_pred HHHhc-CceEEEEEeCcc
Q 002362 270 YESVA-GMCFLLVLDDVW 286 (930)
Q Consensus 270 ~~~l~-~kr~LlVlDdv~ 286 (930)
....+ +..-|||+|-+-
T Consensus 128 ~~l~~~~~~~liIiDSi~ 145 (268)
T d1xp8a1 128 ELLVRSGAIDVVVVDSVA 145 (268)
T ss_dssp HHHHTTTCCSEEEEECTT
T ss_pred HHHHhcCCCcEEEEeccc
Confidence 55554 345689999884
No 73
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=95.99 E-value=0.0014 Score=60.95 Aligned_cols=24 Identities=21% Similarity=0.264 Sum_probs=21.5
Q ss_pred CeEEEEEEecCCChHHHHHHHHhc
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
-.+.|+|.|+.|+||||||+.+.+
T Consensus 6 ~~K~I~i~G~~GsGKTTla~~La~ 29 (192)
T d1lw7a2 6 FAKTVAILGGESSGKSVLVNKLAA 29 (192)
T ss_dssp TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred cceEEEEECCCCCCHHHHHHHHHH
Confidence 368899999999999999998876
No 74
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.97 E-value=0.013 Score=57.16 Aligned_cols=86 Identities=16% Similarity=0.111 Sum_probs=60.0
Q ss_pred CCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHHHHHHHHHHHhcCCCC-----CCccHHHHHHH
Q 002362 194 PKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEFRVAKAIVEALDGHES-----RLGEFQSLIKH 268 (930)
Q Consensus 194 ~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~~~~i~~~l~~~~~-----~~~~~~~~~~~ 268 (930)
-+.-+++-|+|..|+||||+|..++.. .+..-..++|+.....++.+. +++++.... .....++..+.
T Consensus 57 ~~~g~i~e~~G~~~~GKT~l~l~~~~~--~q~~g~~~vyIDtE~~~~~e~-----a~~~GvD~d~il~~~~~~~E~~~~~ 129 (269)
T d1mo6a1 57 LPRGRVIEIYGPESSGKTTVALHAVAN--AQAAGGVAAFIDAEHALDPDY-----AKKLGVDTDSLLVSQPDTGEQALEI 129 (269)
T ss_dssp BCSSSEEEEECSSSSSHHHHHHHHHHH--HHHTTCEEEEEESSCCCCHHH-----HHHHTCCGGGCEEECCSSHHHHHHH
T ss_pred cccceeEEEecCCCcHHHHHHHHHHHH--HhcCCCEEEEEECCccCCHHH-----HHHhCCCHHHeEEecCCCHHHHHHH
Confidence 346689999999999999999888774 334445799999999888764 455554321 12345566555
Q ss_pred HHHHhc-CceEEEEEeCcc
Q 002362 269 IYESVA-GMCFLLVLDDVW 286 (930)
Q Consensus 269 l~~~l~-~kr~LlVlDdv~ 286 (930)
+....+ ++.-|||+|.+-
T Consensus 130 ~~~l~~~~~~~liIiDSi~ 148 (269)
T d1mo6a1 130 ADMLIRSGALDIVVIDSVA 148 (269)
T ss_dssp HHHHHHTTCEEEEEEECST
T ss_pred HHHHHhcCCCCEEEEeccc
Confidence 555444 456799999984
No 75
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=95.94 E-value=0.0027 Score=63.17 Aligned_cols=42 Identities=21% Similarity=0.249 Sum_probs=30.3
Q ss_pred hhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhc
Q 002362 177 DEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 177 ~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
+.+.+.++.+.....+ .+.++.|.++|++|+||||||+.+++
T Consensus 13 ~~~~~~~~~~~~~~~~-~~~P~~ilL~GpPGtGKT~la~~la~ 54 (273)
T d1gvnb_ 13 NRLNDNLEELIQGKKA-VESPTAFLLGGQPGSGKTSLRSAIFE 54 (273)
T ss_dssp HHHHHHHHHHHTTCCC-CSSCEEEEEECCTTSCTHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccC-CCCCEEEEEECCCCCCHHHHHHHHHH
Confidence 3444445555444332 45677899999999999999999987
No 76
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=95.91 E-value=0.0025 Score=58.08 Aligned_cols=23 Identities=26% Similarity=0.411 Sum_probs=21.4
Q ss_pred eEEEEEEecCCChHHHHHHHHhc
Q 002362 197 LHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 197 ~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
++|++|+|..|+|||||++++.+
T Consensus 2 ~Pvi~itG~~GSGKTTL~~~L~~ 24 (170)
T d1np6a_ 2 IPLLAFAAWSGTGKTTLLKKLIP 24 (170)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCHHHHHHHHHH
Confidence 46899999999999999999987
No 77
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=95.90 E-value=0.0012 Score=60.10 Aligned_cols=22 Identities=27% Similarity=0.433 Sum_probs=19.7
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
+.|.|+|++|+||||+|+.++.
T Consensus 3 k~I~l~G~~GsGKSTvak~La~ 24 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQ 24 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHH
Confidence 4688889999999999999876
No 78
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.89 E-value=0.002 Score=59.73 Aligned_cols=23 Identities=35% Similarity=0.439 Sum_probs=20.9
Q ss_pred EEEEEEecCCChHHHHHHHHhch
Q 002362 198 HIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
+.|.|+|++|+|||||++.++..
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~ 24 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEV 24 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHH
T ss_pred cEEEEECCCCCcHHHHHHHHHHH
Confidence 46899999999999999999984
No 79
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=95.88 E-value=0.032 Score=51.92 Aligned_cols=88 Identities=18% Similarity=0.129 Sum_probs=48.4
Q ss_pred CeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCcc--HHHHHHHHHHHhcCCC---CCCccHHHHHHHHH
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFE--EFRVAKAIVEALDGHE---SRLGEFQSLIKHIY 270 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~--~~~~~~~i~~~l~~~~---~~~~~~~~~~~~l~ 270 (930)
+.+|+.++|+.|+||||.+.+++.. .+.+-..+..+++ +.+. ..+-++...+.++.+. ....+.........
T Consensus 9 ~~~vi~lvGp~GvGKTTTiaKLA~~--~~~~g~kV~lit~-Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~~~~~~~~~~~ 85 (207)
T d1ls1a2 9 DRNLWFLVGLQGSGKTTTAAKLALY--YKGKGRRPLLVAA-DTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVE 85 (207)
T ss_dssp SSEEEEEECCTTTTHHHHHHHHHHH--HHHTTCCEEEEEC-CSSCHHHHHHHHHHHHHHTCCEEECCTTCCHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHH--HHHCCCcEEEEec-ccccchHHHHHHHHHHhcCCccccccccchhhHHHHHHH
Confidence 5689999999999999887777663 3344345555555 3333 3344555556555432 12233433332222
Q ss_pred --HHhcCceEEEEEeCccc
Q 002362 271 --ESVAGMCFLLVLDDVWD 287 (930)
Q Consensus 271 --~~l~~kr~LlVlDdv~~ 287 (930)
..+.+.. ++++|=...
T Consensus 86 ~~~~~~~~d-~vlIDTaGr 103 (207)
T d1ls1a2 86 EKARLEARD-LILVDTAGR 103 (207)
T ss_dssp HHHHHHTCC-EEEEECCCC
T ss_pred HHHhhccCc-ceeeccccc
Confidence 2233444 455576654
No 80
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=95.88 E-value=0.0018 Score=57.98 Aligned_cols=22 Identities=41% Similarity=0.451 Sum_probs=19.3
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
++|.|.|++|+||||+|+.+..
T Consensus 3 klIii~G~pGsGKTTla~~L~~ 24 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREFIA 24 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHH
Confidence 5788999999999999998754
No 81
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=95.86 E-value=0.0027 Score=58.13 Aligned_cols=22 Identities=27% Similarity=0.433 Sum_probs=19.9
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
++|.|.|++|+||||+|+.+..
T Consensus 3 klI~i~G~~GsGKTTva~~L~~ 24 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAA 24 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHH
Confidence 6899999999999999998764
No 82
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.84 E-value=0.0022 Score=60.13 Aligned_cols=36 Identities=17% Similarity=0.058 Sum_probs=27.4
Q ss_pred CeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEE
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWV 233 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv 233 (930)
.-.+|.++|++|+||||+|+.+.. +....+....++
T Consensus 18 ~g~vI~L~G~pGSGKTTiAk~La~--~l~~~~~~~~~~ 53 (195)
T d1x6va3 18 RGCTVWLTGLSGAGKTTVSMALEE--YLVCHGIPCYTL 53 (195)
T ss_dssp CCEEEEEESSCHHHHHHHHHHHHH--HHHHTTCCEEEE
T ss_pred CCeEEEEECCCCCCHHHHHHHHHH--HHHhcCCCccch
Confidence 456889999999999999999987 454555444443
No 83
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=95.81 E-value=0.01 Score=57.85 Aligned_cols=84 Identities=17% Similarity=0.137 Sum_probs=56.5
Q ss_pred CeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHHHHHHHHHHHhcCCCC-----CCccHHHHHHHHH
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEFRVAKAIVEALDGHES-----RLGEFQSLIKHIY 270 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~~~~i~~~l~~~~~-----~~~~~~~~~~~l~ 270 (930)
.-+++-|+|.+|+||||||.+++.. ....=..++|+.....++... ++.++.... .....++....+.
T Consensus 53 ~g~itei~G~~gsGKTtl~l~~~~~--~q~~g~~~vyidtE~~~~~~~-----a~~~Gvd~d~v~~~~~~~~E~~~~~i~ 125 (263)
T d1u94a1 53 MGRIVEIYGPESSGKTTLTLQVIAA--AQREGKTCAFIDAEHALDPIY-----ARKLGVDIDNLLCSQPDTGEQALEICD 125 (263)
T ss_dssp TTSEEEEECSTTSSHHHHHHHHHHH--HHHTTCCEEEEESSCCCCHHH-----HHHTTCCGGGCEEECCSSHHHHHHHHH
T ss_pred CceEEEEecCCCcHHHHHHHHHHHH--HHcCCCEEEEEccccccCHHH-----HHHhCCCHHHEEEecCCCHHHHHHHHH
Confidence 4479999999999999999999885 334445789999988887653 455554321 1234455555554
Q ss_pred HHhc-CceEEEEEeCcc
Q 002362 271 ESVA-GMCFLLVLDDVW 286 (930)
Q Consensus 271 ~~l~-~kr~LlVlDdv~ 286 (930)
...+ +..-|||+|-+-
T Consensus 126 ~l~~~~~~~liViDSi~ 142 (263)
T d1u94a1 126 ALARSGAVDVIVVDSVA 142 (263)
T ss_dssp HHHHHTCCSEEEEECGG
T ss_pred HHHhcCCCCEEEEECcc
Confidence 4443 334588888883
No 84
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=95.64 E-value=0.012 Score=54.97 Aligned_cols=59 Identities=20% Similarity=0.137 Sum_probs=32.8
Q ss_pred CCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCC-CccHHHHHHHHHHHhcCC
Q 002362 195 KGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSE-TFEEFRVAKAIVEALDGH 255 (930)
Q Consensus 195 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~-~~~~~~~~~~i~~~l~~~ 255 (930)
+.+.||.++|+.|+||||.+-+++.. .+..=..+..|++.. .....+-++..++.++..
T Consensus 10 k~p~vi~lvGptGvGKTTTiAKLA~~--~~~~g~kV~lit~Dt~R~ga~eQL~~~a~~l~v~ 69 (211)
T d1j8yf2 10 KIPYVIMLVGVQGTGKATTAGKLAYF--YKKKGFKVGLVGADVYRPAALEQLQQLGQQIGVP 69 (211)
T ss_dssp SSSEEEEEECSCCC----HHHHHHHH--HHHTTCCEEEEECCCSSHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHH--HHHCCCceEEEEeeccccchhHHHHHhccccCcc
Confidence 46899999999999999887666653 332223466666543 222333445555555543
No 85
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=95.63 E-value=0.0031 Score=59.09 Aligned_cols=25 Identities=20% Similarity=0.272 Sum_probs=22.6
Q ss_pred CCeEEEEEEecCCChHHHHHHHHhc
Q 002362 195 KGLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 195 ~~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.++.+|.|+|++|+||||+|+.++.
T Consensus 4 ~kp~iI~i~G~pGSGKsT~a~~La~ 28 (194)
T d1qf9a_ 4 SKPNVVFVLGGPGSGKGTQCANIVR 28 (194)
T ss_dssp CCCEEEEEEESTTSSHHHHHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHH
Confidence 4678999999999999999998876
No 86
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=95.55 E-value=0.013 Score=54.51 Aligned_cols=58 Identities=14% Similarity=0.087 Sum_probs=39.5
Q ss_pred CeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCC-CccHHHHHHHHHHHhcCC
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSE-TFEEFRVAKAIVEALDGH 255 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~-~~~~~~~~~~i~~~l~~~ 255 (930)
+.+|+.++|+.|+||||.+-+++.. .+.+=..+..|++.. .....+-++..++.++.+
T Consensus 5 ~~~vi~lvGptGvGKTTTiaKLA~~--~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~i~ 63 (207)
T d1okkd2 5 KGRVVLVVGVNGVGKTTTIAKLGRY--YQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIP 63 (207)
T ss_dssp SSSEEEEECSTTSSHHHHHHHHHHH--HHTTTCCEEEECCCCSSTTHHHHHHHHHHHHTCC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHH--HHHCCCcEEEEEeccccccchhhHhhcccccCce
Confidence 5689999999999999887777763 333324577776643 344555666666666653
No 87
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=95.47 E-value=0.028 Score=53.12 Aligned_cols=59 Identities=19% Similarity=0.140 Sum_probs=36.4
Q ss_pred HHHHHHHHHHhcCceEEEEEeCcccc-CccChhhhhhhhcc--CCCCcEEEEEcCChHHHhh
Q 002362 263 QSLIKHIYESVAGMCFLLVLDDVWDG-NYMKWEPFFHCLKN--GLHRSKILVTTRKKSVASM 321 (930)
Q Consensus 263 ~~~~~~l~~~l~~kr~LlVlDdv~~~-~~~~~~~l~~~l~~--~~~gs~iivTtr~~~v~~~ 321 (930)
+...-.+.+.|..++-+|++|.--.. +...-..+...+.. ...|.-||++|.+.+++..
T Consensus 150 qkQRvaIAraL~~~P~lLllDEPTs~LD~~~~~~i~~~l~~l~~~~g~tii~vTHd~~~a~~ 211 (230)
T d1l2ta_ 150 QQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVARF 211 (230)
T ss_dssp HHHHHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEEECSCHHHHTT
T ss_pred HHHHHHHHhhhhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHhhCCEEEEECCCHHHHHh
Confidence 34455566777777789999987331 11222334444443 2347778999999888853
No 88
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=95.39 E-value=0.045 Score=51.02 Aligned_cols=89 Identities=12% Similarity=0.105 Sum_probs=51.7
Q ss_pred CCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCC-CccHHHHHHHHHHHhcCCC---CCCccHHHHHHHHH
Q 002362 195 KGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSE-TFEEFRVAKAIVEALDGHE---SRLGEFQSLIKHIY 270 (930)
Q Consensus 195 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~-~~~~~~~~~~i~~~l~~~~---~~~~~~~~~~~~l~ 270 (930)
..+.||.++|+.|+||||.+-+++.. ...+=..+..|++.. .....+-++..++.++... ....+.........
T Consensus 9 ~~p~vi~lvGptGvGKTTTiAKLAa~--~~~~~~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~~~~~~~d~~~~~~~~~ 86 (213)
T d1vmaa2 9 EPPFVIMVVGVNGTGKTTSCGKLAKM--FVDEGKSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEGADPAAVAFDAV 86 (213)
T ss_dssp SSCEEEEEECCTTSSHHHHHHHHHHH--HHHTTCCEEEEEECTTCHHHHHHHHHHHHHHTCEEECCSTTCCHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHH--HHHCCCceEEEeecccccchhHHHHHHhhhcCccccccCCCCcHHHHHHHHH
Confidence 46889999999999999887777763 333335677777643 2334445566666665432 22233433322222
Q ss_pred --HHhcCceEEEEEeCcc
Q 002362 271 --ESVAGMCFLLVLDDVW 286 (930)
Q Consensus 271 --~~l~~kr~LlVlDdv~ 286 (930)
...++.. +|++|=.-
T Consensus 87 ~~~~~~~~d-~ilIDTaG 103 (213)
T d1vmaa2 87 AHALARNKD-VVIIDTAG 103 (213)
T ss_dssp HHHHHTTCS-EEEEEECC
T ss_pred HHHHHcCCC-EEEEeccc
Confidence 1223443 67777664
No 89
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=95.34 E-value=0.019 Score=57.11 Aligned_cols=80 Identities=20% Similarity=0.202 Sum_probs=48.0
Q ss_pred CCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCC--eEEEEEeCCCccHHHHHHHHHHHh--cCCCCCCccHHHHHHHH
Q 002362 194 PKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFD--KILWVCVSETFEEFRVAKAIVEAL--DGHESRLGEFQSLIKHI 269 (930)
Q Consensus 194 ~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~--~~~wv~vs~~~~~~~~~~~i~~~l--~~~~~~~~~~~~~~~~l 269 (930)
...+-+|+|.|..|+||||+|+.+.. .....+. .+.-|+...-+-..+.+.. +.+ ....++.-|.+.+.+.+
T Consensus 77 ~k~P~iIGIaG~sgSGKSTla~~L~~--lL~~~~~~~~v~~Is~D~F~~~~~~l~~--~~~~~~~g~Pes~D~~~L~~~L 152 (308)
T d1sq5a_ 77 QRIPYIISIAGSVAVGKSTTARVLQA--LLSRWPEHRRVELITTDGFLHPNQVLKE--RGLMKKKGFPESYDMHRLVKFV 152 (308)
T ss_dssp CCCCEEEEEEECTTSSHHHHHHHHHH--HHTTSTTCCCEEEEEGGGGBCCHHHHHH--HTCTTCTTSGGGBCHHHHHHHH
T ss_pred CCCCEEEEEeCCCCCCCcHHHHHHHH--HHhhhcCCCceEEEeeeeeECCchHHHH--hcCCccCCchHhhhHHHHHHHH
Confidence 45788999999999999999999876 3443332 2344443332222222211 111 11234567788888888
Q ss_pred HHHhcCce
Q 002362 270 YESVAGMC 277 (930)
Q Consensus 270 ~~~l~~kr 277 (930)
.....++.
T Consensus 153 ~~lk~g~~ 160 (308)
T d1sq5a_ 153 SDLKSGVP 160 (308)
T ss_dssp HHHTTTCS
T ss_pred HHHHcCCC
Confidence 77766654
No 90
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.33 E-value=0.0042 Score=58.22 Aligned_cols=26 Identities=27% Similarity=0.457 Sum_probs=23.2
Q ss_pred CCCeEEEEEEecCCChHHHHHHHHhc
Q 002362 194 PKGLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 194 ~~~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
+...+||.|.|++|+||||+|+.++.
T Consensus 5 ~~~~~iI~i~GppGSGKsT~a~~La~ 30 (196)
T d1ukza_ 5 PDQVSVIFVLGGPGAGKGTQCEKLVK 30 (196)
T ss_dssp TTTCEEEEEECSTTSSHHHHHHHHHH
T ss_pred CCCCcEEEEECCCCCCHHHHHHHHHH
Confidence 34789999999999999999998866
No 91
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=95.32 E-value=0.011 Score=57.21 Aligned_cols=41 Identities=22% Similarity=0.234 Sum_probs=34.2
Q ss_pred CeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCC
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSET 238 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~ 238 (930)
.-.++.|+|.+|+|||++|.+++.+ ...+...++|++....
T Consensus 25 ~gsl~li~G~pGsGKT~l~~qia~~--~~~~~~~~~~is~e~~ 65 (242)
T d1tf7a2 25 KDSIILATGATGTGKTLLVSRFVEN--ACANKERAILFAYEES 65 (242)
T ss_dssp SSCEEEEEECTTSSHHHHHHHHHHH--HHTTTCCEEEEESSSC
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHH--HHHhccccceeeccCC
Confidence 5679999999999999999999884 5567778899887643
No 92
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=95.32 E-value=0.0031 Score=57.59 Aligned_cols=21 Identities=38% Similarity=0.510 Sum_probs=18.8
Q ss_pred EEEEEecCCChHHHHHHHHhc
Q 002362 199 IISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.|.|.|++|+||||+|+.+..
T Consensus 6 ~I~i~G~pGsGKTTia~~La~ 26 (173)
T d1rkba_ 6 NILLTGTPGVGKTTLGKELAS 26 (173)
T ss_dssp CEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 477999999999999998876
No 93
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=95.27 E-value=0.013 Score=55.75 Aligned_cols=121 Identities=17% Similarity=0.130 Sum_probs=65.3
Q ss_pred EEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEE----------------eCCCc----------------------c
Q 002362 199 IISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVC----------------VSETF----------------------E 240 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~----------------vs~~~----------------------~ 240 (930)
+++|+|+.|.|||||.+.++.-. ..-...+|+. |.|.+ .
T Consensus 26 ~~~liGpnGaGKSTll~~i~Gl~---~p~~G~I~~~G~~i~~~~~~~r~ig~v~Q~~~l~~~ltV~enl~~~l~~~~~~~ 102 (240)
T d2onka1 26 YCVLLGPTGAGKSVFLELIAGIV---KPDRGEVRLNGADITPLPPERRGIGFVPQDYALFPHLSVYRNIAYGLRNVERVE 102 (240)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSS---CCSEEEEEETTEECTTSCTTTSCCBCCCSSCCCCTTSCHHHHHHTTCTTSCHHH
T ss_pred EEEEECCCCChHHHHHHHHHcCC---CCCceEEEECCEECCcCCHHHcCceeeccchhhcccchhhHhhhhhhcccCHHH
Confidence 78899999999999999997621 1112233322 11111 1
Q ss_pred HHHHHHHHHHHhcCCCCC------CccHHHHHHHHHHHhcCceEEEEEeCcccc-CccChhhhhhhhccC--CCCcEEEE
Q 002362 241 EFRVAKAIVEALDGHESR------LGEFQSLIKHIYESVAGMCFLLVLDDVWDG-NYMKWEPFFHCLKNG--LHRSKILV 311 (930)
Q Consensus 241 ~~~~~~~i~~~l~~~~~~------~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~-~~~~~~~l~~~l~~~--~~gs~iiv 311 (930)
..+...++++.++..... ....+...-.+.+.+-.++-++++|.--.. +...-..+...+..- ..|.-||+
T Consensus 103 ~~~~v~~~l~~~gl~~~~~~~~~~LSGG~kQRvaiAral~~~P~illlDEPts~LD~~~~~~i~~~i~~l~~~~g~tvi~ 182 (240)
T d2onka1 103 RDRRVREMAEKLGIAHLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILH 182 (240)
T ss_dssp HHHHHHHHHHTTTCTTTTTCCGGGSCHHHHHHHHHHHHHTTCCSSBEEESTTSSCCHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHhcCcHhhhhCChhhCCHHHHHHHHHHHHHhccCCceEecCccccCCHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 123344555555433211 122334455566777778889999987431 111112333333321 23556888
Q ss_pred EcCChHHHhhh
Q 002362 312 TTRKKSVASMM 322 (930)
Q Consensus 312 Ttr~~~v~~~~ 322 (930)
+|.+...+..+
T Consensus 183 vtHd~~~~~~~ 193 (240)
T d2onka1 183 VTHDLIEAAML 193 (240)
T ss_dssp EESCHHHHHHH
T ss_pred EeCCHHHHHHh
Confidence 88886665544
No 94
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=95.24 E-value=0.0044 Score=56.44 Aligned_cols=25 Identities=28% Similarity=0.554 Sum_probs=22.7
Q ss_pred CCeEEEEEEecCCChHHHHHHHHhc
Q 002362 195 KGLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 195 ~~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
...+++.|.|++|+||||+|+.+..
T Consensus 4 ~~~~iivl~G~~GsGKsT~a~~La~ 28 (171)
T d1knqa_ 4 HDHHIYVLMGVSGSGKSAVASEVAH 28 (171)
T ss_dssp TTSEEEEEECSTTSCHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHH
Confidence 4678999999999999999999876
No 95
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=95.22 E-value=0.022 Score=56.79 Aligned_cols=71 Identities=18% Similarity=0.246 Sum_probs=42.4
Q ss_pred eEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHhcCc
Q 002362 197 LHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEFRVAKAIVEALDGHESRLGEFQSLIKHIYESVAGM 276 (930)
Q Consensus 197 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~l~~~l~~k 276 (930)
-.++.++|++|+|||.||+.++. +....+.. +-+..++-.+ .-..+.++....+.+..+ +
T Consensus 123 ~g~~l~~G~pG~GKT~la~ala~--~~~~~~~~-~~~~~~~~~~----------------~~~G~~e~~~~~~f~~a~-~ 182 (321)
T d1w44a_ 123 SGMVIVTGKGNSGKTPLVHALGE--ALGGKDKY-ATVRFGEPLS----------------GYNTDFNVFVDDIARAML-Q 182 (321)
T ss_dssp SEEEEEECSSSSCHHHHHHHHHH--HHHTTSCC-EEEEBSCSST----------------TCBCCHHHHHHHHHHHHH-H
T ss_pred CceEEEECCCCccHHHHHHHHHH--HhcCCCCe-EEEEhhHhhh----------------cccchHHHHHHHHHHHHh-h
Confidence 34667799999999999999998 45433322 2244443221 112233444444444433 3
Q ss_pred eEEEEEeCccc
Q 002362 277 CFLLVLDDVWD 287 (930)
Q Consensus 277 r~LlVlDdv~~ 287 (930)
..+|++|.++.
T Consensus 183 ~~ilf~DEid~ 193 (321)
T d1w44a_ 183 HRVIVIDSLKN 193 (321)
T ss_dssp CSEEEEECCTT
T ss_pred ccEEEeehhhh
Confidence 56999999965
No 96
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=95.22 E-value=0.0058 Score=55.42 Aligned_cols=64 Identities=16% Similarity=0.125 Sum_probs=28.5
Q ss_pred hhcCCcceEEEcCCcccccCCCCCcccCcccccCCCCCeeeccCCccc-----ccccccccCCcccEEecc
Q 002362 578 FRESTSLRVLEFGDWARSLQLGPLTRIPRNIERLVHLRYLNLSNQSIR-----KLPDTLCELYNLQKLDIS 643 (930)
Q Consensus 578 ~~~~~~Lr~L~L~~~~~~~~~~~~~~lp~~i~~L~~Lr~L~L~~~~i~-----~lp~~i~~L~~L~~L~l~ 643 (930)
+...++|+.|+|++|... ......+-..+.....|++|++++|.+. .+...+...++|+.++|+
T Consensus 42 l~~n~~L~~L~Ls~n~l~--~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~ 110 (166)
T d1io0a_ 42 LKTNTYVKKFSIVGTRSN--DPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRID 110 (166)
T ss_dssp HTTCCSCCEEECTTSCCC--HHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECC
T ss_pred HhcCCccCeeeccCCccc--HHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeec
Confidence 445555566666544221 0011222233344455555555555543 233444455555554443
No 97
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.21 E-value=0.0031 Score=57.31 Aligned_cols=20 Identities=25% Similarity=0.561 Sum_probs=17.3
Q ss_pred EEEEecCCChHHHHHHHHhc
Q 002362 200 ISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~ 219 (930)
|.++|++|+||||+|+.++.
T Consensus 4 IvliG~~G~GKSTig~~La~ 23 (165)
T d2iyva1 4 AVLVGLPGSGKSTIGRRLAK 23 (165)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 34559999999999999987
No 98
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=95.17 E-value=0.016 Score=54.88 Aligned_cols=22 Identities=27% Similarity=0.590 Sum_probs=20.1
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.+++|+|+.|.|||||.+.++-
T Consensus 27 ei~~liGpsGsGKSTLl~~i~G 48 (232)
T d2awna2 27 EFVVFVGPSGCGKSTLLRMIAG 48 (232)
T ss_dssp CEEEEECCTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCChHHHHHHHHhc
Confidence 5899999999999999999855
No 99
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=95.15 E-value=0.007 Score=54.79 Aligned_cols=22 Identities=27% Similarity=0.383 Sum_probs=20.8
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
++++|+|..|+|||||+.++..
T Consensus 2 kii~I~G~~gSGKTTli~~l~~ 23 (165)
T d1xjca_ 2 NVWQVVGYKHSGKTTLMEKWVA 23 (165)
T ss_dssp CEEEEECCTTSSHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHH
Confidence 5899999999999999999987
No 100
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=95.15 E-value=0.0039 Score=56.30 Aligned_cols=20 Identities=45% Similarity=0.642 Sum_probs=18.4
Q ss_pred EEEEecCCChHHHHHHHHhc
Q 002362 200 ISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~ 219 (930)
|.|+||+|+||||+|+.++.
T Consensus 3 I~liG~~GsGKsTi~k~La~ 22 (161)
T d1viaa_ 3 IVFIGFMGSGKSTLARALAK 22 (161)
T ss_dssp EEEECCTTSCHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 67889999999999999987
No 101
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.14 E-value=0.0049 Score=56.24 Aligned_cols=25 Identities=24% Similarity=0.379 Sum_probs=22.3
Q ss_pred CCeEEEEEEecCCChHHHHHHHHhc
Q 002362 195 KGLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 195 ~~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
....+|.++|++|+||||+|+....
T Consensus 12 ~~p~liil~G~pGsGKST~a~~l~~ 36 (172)
T d1yj5a2 12 PNPEVVVAVGFPGAGKSTFIQEHLV 36 (172)
T ss_dssp SSCCEEEEECCTTSSHHHHHHHHTG
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHH
Confidence 4678999999999999999998865
No 102
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=95.11 E-value=0.013 Score=57.36 Aligned_cols=97 Identities=16% Similarity=0.090 Sum_probs=54.9
Q ss_pred HHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEE-eCCCccHHHHHHHHHHHhcC----C
Q 002362 181 ELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVC-VSETFEEFRVAKAIVEALDG----H 255 (930)
Q Consensus 181 ~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~-vs~~~~~~~~~~~i~~~l~~----~ 255 (930)
++++.+..-. .-+.++|+|..|+|||+|+..+.+... ..+-++++.+. +.+.... ..++.+.... .
T Consensus 32 r~ID~l~Pig-----rGQr~~I~g~~g~GKT~l~~~i~~~~~-~~~~~~v~~~~~iger~~e---v~~~~~~~~~~vv~~ 102 (289)
T d1xpua3 32 RVLDLASPIG-----RGQRGLIVAPPKAGKTMLLQNIAQSIA-YNHPDCVLMVLLIDERPEE---VTEMQRLVKGEVVAS 102 (289)
T ss_dssp HHHHHHSCCB-----TTCEEEEEECSSSSHHHHHHHHHHHHH-HHCTTSEEEEEEEEECHHH---HHHHHHHCSSEEEEE
T ss_pred eeeeeccccc-----CCCeeeEeCCCCCCHHHHHHHHHHHHh-hcCCCeEEEEEeeceeHHH---HHhHHhhcceEEEec
Confidence 6788887533 335799999999999999999988532 34445454443 3332221 1222222211 0
Q ss_pred CCCCcc-----HHHHHHHHHHHh--cCceEEEEEeCcc
Q 002362 256 ESRLGE-----FQSLIKHIYESV--AGMCFLLVLDDVW 286 (930)
Q Consensus 256 ~~~~~~-----~~~~~~~l~~~l--~~kr~LlVlDdv~ 286 (930)
..+... .....-.+.+++ +++.+|+++||+-
T Consensus 103 t~d~~~~~r~~~~~~a~~iAEyfrd~G~dVLli~Dslt 140 (289)
T d1xpua3 103 TFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSIT 140 (289)
T ss_dssp ETTSCHHHHHHHHHHHHHHHHHHHTTTCEEEEEESCHH
T ss_pred cCCCchhHHHHHHHHHHHHHHHHHHhccCceeecCcHH
Confidence 111111 112233344555 5889999999993
No 103
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.09 E-value=0.02 Score=55.51 Aligned_cols=100 Identities=19% Similarity=0.122 Sum_probs=61.6
Q ss_pred HHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCc-cHHHHHHHHHHHhcC--C--
Q 002362 181 ELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETF-EEFRVAKAIVEALDG--H-- 255 (930)
Q Consensus 181 ~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~-~~~~~~~~i~~~l~~--~-- 255 (930)
++++.+..-. +-+.++|+|..|+|||+|+..+.++. .+.+=+..+++-+.+.. .+.++..++.+.--. .
T Consensus 57 raID~l~pig-----kGQr~~If~~~g~GKt~l~~~i~~~~-~~~~~~v~V~~~iGer~~ev~~~~~~~~~~~~~~~~~~ 130 (276)
T d2jdid3 57 KVVDLLAPYA-----KGGKIGLFGGAGVGKTVLIMELINNV-AKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDA 130 (276)
T ss_dssp HHHHHHSCEE-----TTCEEEEEECTTSSHHHHHHHHHHHH-TTTCSSEEEEEEESCCHHHHHHHHHHHHHHTSSCSSSS
T ss_pred eeeeeecccc-----CCCEEEeeCCCCCCHHHHHHHHHHHH-HhhCCCeEEEEEeccChHHHHHHHHHHHhcCccccccc
Confidence 5666665432 22459999999999999999988741 22344578888888764 455666776654210 0
Q ss_pred ---------CCCCccHH-----HHHHHHHHHh---cCceEEEEEeCcc
Q 002362 256 ---------ESRLGEFQ-----SLIKHIYESV---AGMCFLLVLDDVW 286 (930)
Q Consensus 256 ---------~~~~~~~~-----~~~~~l~~~l---~~kr~LlVlDdv~ 286 (930)
..+..-.. ...-.+.+++ +++.+|+++||+-
T Consensus 131 ~~~tvvv~~~s~~~~~~r~~~~~~a~~iAEyf~~~~G~~VLv~~Dslt 178 (276)
T d2jdid3 131 TSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 178 (276)
T ss_dssp CCCEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEECTH
T ss_pred cceEEEEEECCCCCHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEcchh
Confidence 00111111 2233355665 3789999999994
No 104
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.08 E-value=0.0048 Score=58.56 Aligned_cols=24 Identities=21% Similarity=0.355 Sum_probs=21.7
Q ss_pred eEEEEEEecCCChHHHHHHHHhch
Q 002362 197 LHIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 197 ~~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
+.+|.++|.+|+||||+|++++..
T Consensus 2 p~li~l~GlpgsGKSTla~~L~~~ 25 (213)
T d1bifa1 2 PTLIVMVGLPARGKTYISKKLTRY 25 (213)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHH
Confidence 468999999999999999999873
No 105
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=95.06 E-value=0.0054 Score=56.11 Aligned_cols=23 Identities=35% Similarity=0.494 Sum_probs=20.8
Q ss_pred eEEEEEEecCCChHHHHHHHHhc
Q 002362 197 LHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 197 ~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
-++|.|.|++|+||||+|+.+..
T Consensus 4 g~iI~l~G~~GsGKSTia~~La~ 26 (176)
T d1zp6a1 4 GNILLLSGHPGSGKSTIAEALAN 26 (176)
T ss_dssp TEEEEEEECTTSCHHHHHHHHHT
T ss_pred CeEEEEECCCCCCHHHHHHHHHH
Confidence 47899999999999999998865
No 106
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=95.05 E-value=0.035 Score=53.00 Aligned_cols=22 Identities=41% Similarity=0.705 Sum_probs=20.3
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
..++|+|..|.|||||++.+..
T Consensus 30 e~vaIvG~sGsGKSTLl~ll~g 51 (241)
T d2pmka1 30 EVIGIVGRSGSGKSTLTKLIQR 51 (241)
T ss_dssp CEEEEECSTTSSHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHh
Confidence 5899999999999999999865
No 107
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=95.04 E-value=0.0071 Score=55.92 Aligned_cols=22 Identities=36% Similarity=0.670 Sum_probs=20.8
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
++|.|.|+.|+||||+++.+..
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~ 23 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMD 23 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHH
Confidence 6899999999999999999987
No 108
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=94.95 E-value=0.0047 Score=56.58 Aligned_cols=23 Identities=17% Similarity=0.257 Sum_probs=20.8
Q ss_pred eEEEEEEecCCChHHHHHHHHhc
Q 002362 197 LHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 197 ~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.++|.|.|.+|+||||+|+.+..
T Consensus 3 ~kiI~l~G~~GsGKsTva~~L~~ 25 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIVRCLQS 25 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHH
Confidence 46899999999999999998876
No 109
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=94.81 E-value=0.028 Score=53.44 Aligned_cols=60 Identities=13% Similarity=0.058 Sum_probs=35.7
Q ss_pred HHHHHHHHHHhcCceEEEEEeCcccc-CccChhhhhhhhccC--CCCcEEEEEcCChHHHhhh
Q 002362 263 QSLIKHIYESVAGMCFLLVLDDVWDG-NYMKWEPFFHCLKNG--LHRSKILVTTRKKSVASMM 322 (930)
Q Consensus 263 ~~~~~~l~~~l~~kr~LlVlDdv~~~-~~~~~~~l~~~l~~~--~~gs~iivTtr~~~v~~~~ 322 (930)
+...-.+.+.|-.++-+|++|+--.. +...-..+...+..- ..|.-||++|.+.+.+..+
T Consensus 145 qkQRvaiARaL~~~P~llllDEPt~~LD~~~~~~i~~~i~~l~~~~g~tvi~vTHd~~~~~~~ 207 (242)
T d1oxxk2 145 QQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAI 207 (242)
T ss_dssp HHHHHHHHHHHTTCCSEEEEESTTTTSCGGGHHHHHHHHHHHHHHHCCEEEEEESCHHHHHHH
T ss_pred HHhHHHHHhHHhhcccceeecCCccCCCHHHHHHHHHHHHHHHhccCCEEEEEECCHHHHHHh
Confidence 34455566778788889999987331 222223344443331 2366788999887666544
No 110
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=94.79 E-value=0.0066 Score=55.36 Aligned_cols=24 Identities=33% Similarity=0.392 Sum_probs=20.7
Q ss_pred CeEEEEEEecCCChHHHHHHHHhc
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
..-.|.|.|++|+||||+|+.++.
T Consensus 4 k~~~I~i~G~~GsGKTT~~~~La~ 27 (174)
T d1y63a_ 4 KGINILITGTPGTGKTSMAEMIAA 27 (174)
T ss_dssp SSCEEEEECSTTSSHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHH
Confidence 445688999999999999998876
No 111
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=94.76 E-value=0.013 Score=54.39 Aligned_cols=27 Identities=22% Similarity=0.350 Sum_probs=22.7
Q ss_pred EEEEEEecCCChHHHHHHHHhchHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACNHEEVKRK 226 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~ 226 (930)
++|.|.|+.|+||||+|+.+.. +....
T Consensus 2 kiivi~G~~GsGKTT~~~~La~--~L~~~ 28 (194)
T d1nksa_ 2 KIGIVTGIPGVGKSTVLAKVKE--ILDNQ 28 (194)
T ss_dssp EEEEEEECTTSCHHHHHHHHHH--HHHTT
T ss_pred eEEEEECCCCCCHHHHHHHHHH--HHHHc
Confidence 6899999999999999999987 44433
No 112
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=94.74 E-value=0.0063 Score=55.19 Aligned_cols=96 Identities=10% Similarity=0.122 Sum_probs=61.1
Q ss_pred hhHHHHHhhcCCcceEEEcCCcccccCCCCCcccCcccccCCCCCeeeccCCccc-----ccccccccCCcccEEeccCC
Q 002362 571 GKILERLFRESTSLRVLEFGDWARSLQLGPLTRIPRNIERLVHLRYLNLSNQSIR-----KLPDTLCELYNLQKLDISCC 645 (930)
Q Consensus 571 ~~~~~~~~~~~~~Lr~L~L~~~~~~~~~~~~~~lp~~i~~L~~Lr~L~L~~~~i~-----~lp~~i~~L~~L~~L~l~~~ 645 (930)
.+.+..+..+.+.|+.|+|+++... ....+..+-..+...++|+.|+|++|.++ .+-..+...+.|+.|++++|
T Consensus 6 ~~~l~~~~~~~~~L~~L~L~~~~~i-~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~ 84 (166)
T d1io0a_ 6 EETLKRIQNNDPDLEEVNLNNIMNI-PVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESN 84 (166)
T ss_dssp HHHHHHHHTTCTTCCEEECTTCTTC-CHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSS
T ss_pred HHHHHHHHhcCCCCcEEEcCCCCCC-CHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccc
Confidence 3445666778889999999853211 11122334455667888999999998876 33445566788888888887
Q ss_pred CCCc----cccccccccCCcceEeec
Q 002362 646 CKLK----ELPQGIGKLINMRHLLNY 667 (930)
Q Consensus 646 ~~~~----~lp~~i~~L~~L~~L~l~ 667 (930)
.... .+...+...++|+.++++
T Consensus 85 ~~~~~g~~~l~~~l~~~~~L~~l~L~ 110 (166)
T d1io0a_ 85 FISGSGILALVEALQSNTSLIELRID 110 (166)
T ss_dssp CCCHHHHHHHHHGGGGCSSCCEEECC
T ss_pred cccchhHHHHHHHHHhCccccEEeec
Confidence 6322 233445566667665554
No 113
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=94.73 E-value=0.0048 Score=56.27 Aligned_cols=21 Identities=29% Similarity=0.407 Sum_probs=18.7
Q ss_pred EEEEEecCCChHHHHHHHHhc
Q 002362 199 IISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.|.++|++|+||||+|+.+++
T Consensus 4 ~Iil~G~~GsGKSTia~~LA~ 24 (170)
T d1e6ca_ 4 PIFMVGARGCGMTTVGRELAR 24 (170)
T ss_dssp CEEEESCTTSSHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHH
Confidence 466889999999999999986
No 114
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=94.72 E-value=0.053 Score=51.84 Aligned_cols=24 Identities=33% Similarity=0.373 Sum_probs=21.1
Q ss_pred CeEEEEEEecCCChHHHHHHHHhc
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.-.+++|+|+.|.|||||++.+..
T Consensus 27 ~Ge~vaivG~sGsGKSTLl~ll~g 50 (242)
T d1mv5a_ 27 PNSIIAFAGPSGGGKSTIFSLLER 50 (242)
T ss_dssp TTEEEEEECCTTSSHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHH
Confidence 346899999999999999999865
No 115
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=94.48 E-value=0.0075 Score=55.27 Aligned_cols=21 Identities=43% Similarity=0.569 Sum_probs=19.5
Q ss_pred EEEEecCCChHHHHHHHHhch
Q 002362 200 ISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~~ 220 (930)
|+|+|+.|+|||||++.+...
T Consensus 3 i~I~G~~G~GKSTLl~~i~~~ 23 (178)
T d1ye8a1 3 IIITGEPGVGKTTLVKKIVER 23 (178)
T ss_dssp EEEECCTTSSHHHHHHHHHHH
T ss_pred EEEECCCCcHHHHHHHHHHhc
Confidence 899999999999999999873
No 116
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.46 E-value=0.1 Score=49.98 Aligned_cols=23 Identities=35% Similarity=0.541 Sum_probs=20.6
Q ss_pred eEEEEEEecCCChHHHHHHHHhc
Q 002362 197 LHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 197 ~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
-.+++|+|+.|.|||||++.+..
T Consensus 40 Ge~vaivG~sGsGKSTLl~li~g 62 (251)
T d1jj7a_ 40 GEVTALVGPNGSGKSTVAALLQN 62 (251)
T ss_dssp TCEEEEECSTTSSHHHHHHHHTT
T ss_pred CCEEEEECCCCCcHHHHHHHHhc
Confidence 35899999999999999999865
No 117
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=94.38 E-value=0.018 Score=54.12 Aligned_cols=25 Identities=28% Similarity=0.246 Sum_probs=22.8
Q ss_pred CCeEEEEEEecCCChHHHHHHHHhc
Q 002362 195 KGLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 195 ~~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.+..||.+.|++|+||||||+.+..
T Consensus 22 ~kg~vIwltGlsGsGKTTia~~L~~ 46 (208)
T d1m7ga_ 22 QRGLTIWLTGLSASGKSTLAVELEH 46 (208)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHH
Confidence 4678999999999999999999986
No 118
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=94.30 E-value=0.01 Score=55.11 Aligned_cols=23 Identities=30% Similarity=0.511 Sum_probs=20.0
Q ss_pred CeEEEEEEecCCChHHHHHHHHhc
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
+.++| |+|++|+||||+|+.++.
T Consensus 3 ~~rii-l~G~pGSGKsT~a~~La~ 25 (190)
T d1ak2a1 3 GVRAV-LLGPPGAGKGTQAPKLAK 25 (190)
T ss_dssp CCEEE-EECCTTSSHHHHHHHHHH
T ss_pred ccEEE-EECCCCCCHHHHHHHHHH
Confidence 56777 689999999999998875
No 119
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=94.23 E-value=0.043 Score=52.26 Aligned_cols=59 Identities=17% Similarity=0.110 Sum_probs=34.4
Q ss_pred HHHHHHHHHhcCceEEEEEeCcccc-CccChhhhhhhhcc-CCCCcEEEEEcCChHHHhhh
Q 002362 264 SLIKHIYESVAGMCFLLVLDDVWDG-NYMKWEPFFHCLKN-GLHRSKILVTTRKKSVASMM 322 (930)
Q Consensus 264 ~~~~~l~~~l~~kr~LlVlDdv~~~-~~~~~~~l~~~l~~-~~~gs~iivTtr~~~v~~~~ 322 (930)
...-.+...+..++=+++||+.-.. +......+...+.. ...|--||+||.+.+.+..+
T Consensus 139 ~qrv~iA~al~~~p~illLDEPt~gLD~~~~~~i~~~i~~~~~~g~tii~~tH~l~~~~~~ 199 (238)
T d1vpla_ 139 VRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQASQEGLTILVSSHNMLEVEFL 199 (238)
T ss_dssp HHHHHHHHHHTTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHTTT
T ss_pred HHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHh
Confidence 3344556667777778999987431 11222333333332 12466799999988776654
No 120
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=94.18 E-value=0.031 Score=55.29 Aligned_cols=52 Identities=19% Similarity=0.257 Sum_probs=35.8
Q ss_pred hHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCC
Q 002362 178 EKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSE 237 (930)
Q Consensus 178 ~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~ 237 (930)
++..+.+.+. ..+.+||.+.|-||+||||+|-.+.. .....-..+.-|....
T Consensus 7 ~~~~~~~~~~------~~~~~iii~sGKGGVGKTT~a~nLA~--~lA~~G~rVllvD~Dp 58 (279)
T d1ihua2 7 SLSALVDDIA------RNEHGLIMLMGKGGVGKTTMAAAIAV--RLADMGFDVHLTTSDP 58 (279)
T ss_dssp CHHHHHHHHH------TTSCEEEEEECSTTSSHHHHHHHHHH--HHHHTTCCEEEEESCC
T ss_pred cHHHHHHHhh------cCCCEEEEEECCCCCCHHHHHHHHHH--HHHHCCCcEEEEeCCC
Confidence 3455666665 34689999999999999999887776 3333333466666653
No 121
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.17 E-value=0.011 Score=55.20 Aligned_cols=22 Identities=23% Similarity=0.344 Sum_probs=20.4
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.+|.|.|++|+||||.|+.+++
T Consensus 2 ~iI~i~GppGSGKsT~a~~La~ 23 (194)
T d1teva_ 2 LVVFVLGGPGAGKGTQCARIVE 23 (194)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHH
Confidence 5899999999999999998876
No 122
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=94.06 E-value=0.03 Score=53.93 Aligned_cols=23 Identities=35% Similarity=0.525 Sum_probs=20.2
Q ss_pred eEEEEEEecCCChHHHHHHHHhc
Q 002362 197 LHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 197 ~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
-..++|+|..|.|||||++.+..
T Consensus 44 Ge~vaivG~sGsGKSTLl~ll~g 66 (255)
T d2hyda1 44 GETVAFVGMSGGGKSTLINLIPR 66 (255)
T ss_dssp TCEEEEECSTTSSHHHHHTTTTT
T ss_pred CCEEEEECCCCCcHHHHHHHHHh
Confidence 35899999999999999998854
No 123
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.05 E-value=0.089 Score=51.28 Aligned_cols=82 Identities=15% Similarity=0.069 Sum_probs=47.6
Q ss_pred CCCeEEEEEEecCCChHHHHHHHHhchHHHHhcC-CeEEEEEeCCCccHHHHHHHHHHHhc-------CCCCCCccHHHH
Q 002362 194 PKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKF-DKILWVCVSETFEEFRVAKAIVEALD-------GHESRLGEFQSL 265 (930)
Q Consensus 194 ~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F-~~~~wv~vs~~~~~~~~~~~i~~~l~-------~~~~~~~~~~~~ 265 (930)
...+-+|+|.|..|+||||||..+.....-+..+ ..++-++..+-+-..+-...+.+... ...++..|++-+
T Consensus 24 ~~~P~iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~DdfY~t~~~r~~L~~~~~~~pl~~~RG~PgThD~~ll 103 (286)
T d1odfa_ 24 NKCPLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYLTHEDQLKLNEQFKNNKLLQGRGLPGTHDMKLL 103 (286)
T ss_dssp CCSCEEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGBCCHHHHHHHHHHTTTCGGGSSSCSTTSBCHHHH
T ss_pred CCCCEEEEeECCCCCCHHHHHHHHHHHHHHHhCCCcceEeeccCCCCCCHHHHHHHhhhccccccceecCCCcchhHHHH
Confidence 4467899999999999999999887632111112 23555554442222222333444432 233566778777
Q ss_pred HHHHHHHhcC
Q 002362 266 IKHIYESVAG 275 (930)
Q Consensus 266 ~~~l~~~l~~ 275 (930)
.+.+....++
T Consensus 104 ~~~l~~l~~~ 113 (286)
T d1odfa_ 104 QEVLNTIFNN 113 (286)
T ss_dssp HHHHHHHTC-
T ss_pred HHHHHHHHhh
Confidence 7777665544
No 124
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=93.77 E-value=0.031 Score=54.94 Aligned_cols=37 Identities=27% Similarity=0.358 Sum_probs=27.7
Q ss_pred EEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeC
Q 002362 198 HIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVS 236 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs 236 (930)
+.|+|+|-||+||||+|-.+..- ....-..++-|.+.
T Consensus 2 r~Iai~gKGGvGKTT~a~nLA~~--LA~~G~rVllID~D 38 (269)
T d1cp2a_ 2 RQVAIYGKGGIGKSTTTQNLTSG--LHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHH--HHTTTCCEEEEEEC
T ss_pred CEEEEECCCcCCHHHHHHHHHHH--HHhCCCcEEEEecC
Confidence 68999999999999999888773 33333356666654
No 125
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.70 E-value=0.015 Score=55.05 Aligned_cols=23 Identities=17% Similarity=0.290 Sum_probs=20.9
Q ss_pred eEEEEEEecCCChHHHHHHHHhc
Q 002362 197 LHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 197 ~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
+-||+|.|..|+||||+|+.+..
T Consensus 2 P~iIgI~G~~gSGKSTla~~L~~ 24 (213)
T d1uj2a_ 2 PFLIGVSGGTASGKSSVCAKIVQ 24 (213)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHH
Confidence 46899999999999999998876
No 126
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=93.61 E-value=0.013 Score=55.87 Aligned_cols=22 Identities=36% Similarity=0.530 Sum_probs=20.5
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.||+|.|++|+||||+|+.+.+
T Consensus 4 piI~I~GppGSGKgT~ak~La~ 25 (225)
T d1ckea_ 4 PVITIDGPSGAGKGTLCKAMAE 25 (225)
T ss_dssp CEEEEECCTTSSHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHH
Confidence 4999999999999999998877
No 127
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=93.58 E-value=0.032 Score=55.72 Aligned_cols=45 Identities=18% Similarity=0.205 Sum_probs=32.3
Q ss_pred CeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHH
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEF 242 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~ 242 (930)
..++|.+.|-||+||||+|..++. ....+=..+.-|.+....+..
T Consensus 7 ~p~~i~~sGKGGVGKTTvaa~lA~--~lA~~G~rVLlvD~Dp~~~l~ 51 (296)
T d1ihua1 7 IPPYLFFTGKGGVGKTSISCATAI--RLAEQGKRVLLVSTDPASNVG 51 (296)
T ss_dssp CCSEEEEECSTTSSHHHHHHHHHH--HHHHTTCCEEEEECCTTCCHH
T ss_pred CCeEEEEECCCcChHHHHHHHHHH--HHHHCCCCEEEEeCCCCCCHH
Confidence 577899999999999999988877 344443456777765544433
No 128
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=93.47 E-value=0.016 Score=53.91 Aligned_cols=24 Identities=29% Similarity=0.350 Sum_probs=21.6
Q ss_pred CeEEEEEEecCCChHHHHHHHHhc
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
..++|.|.|++|+||||+|+.+..
T Consensus 7 ~~~iI~l~G~pGSGKsT~a~~La~ 30 (194)
T d3adka_ 7 KSKIIFVVGGPGSGKGTQCEKIVQ 30 (194)
T ss_dssp TSCEEEEEECTTSSHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHH
Confidence 467999999999999999998865
No 129
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.44 E-value=0.14 Score=47.80 Aligned_cols=35 Identities=14% Similarity=0.148 Sum_probs=25.5
Q ss_pred EEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEE
Q 002362 198 HIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVC 234 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~ 234 (930)
..|+|-|+.|+||||+|+.+.+ ....+--.++++.
T Consensus 4 ~lI~ieG~dGsGKsT~~~~L~~--~L~~~g~~v~~~~ 38 (209)
T d1nn5a_ 4 ALIVLEGVDRAGKSTQSRKLVE--ALCAAGHRAELLR 38 (209)
T ss_dssp CEEEEEESTTSSHHHHHHHHHH--HHHHTTCCEEEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHH--HHHHCCCcEEEEe
Confidence 5788999999999999999987 4444333344443
No 130
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=93.34 E-value=0.016 Score=53.24 Aligned_cols=20 Identities=30% Similarity=0.523 Sum_probs=18.3
Q ss_pred EEEEecCCChHHHHHHHHhc
Q 002362 200 ISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~ 219 (930)
|.|.|++|+||||+|+.++.
T Consensus 3 I~i~G~pGSGKsT~a~~La~ 22 (182)
T d1zina1 3 LVLMGLPGAGKGTQAEKIVA 22 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 67999999999999998866
No 131
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=93.30 E-value=0.062 Score=52.15 Aligned_cols=87 Identities=16% Similarity=0.039 Sum_probs=49.9
Q ss_pred EEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccH-HHHHHHHHHHhcC----------CCCCC--ccHHH
Q 002362 198 HIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEE-FRVAKAIVEALDG----------HESRL--GEFQS 264 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~-~~~~~~i~~~l~~----------~~~~~--~~~~~ 264 (930)
.-++|+|..|+|||+|+...... ...+-+.++++-+.+.... .++..++.+.=.. ..+.. .-...
T Consensus 68 Qr~~Ifg~~g~GKt~l~~~~~~~--~~~~~~v~V~~~iGer~~Ev~e~~~~~~~~~~~~~tvvv~~tsd~p~~~r~~a~~ 145 (276)
T d1fx0a3 68 QRELIIGDRQTGKTAVATDTILN--QQGQNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYLAPY 145 (276)
T ss_dssp CBCBEEESSSSSHHHHHHHHHHT--CCTTTCEEEEEEESCCHHHHHHHHHHTGGGTGGGSEEEEEECTTSCGGGTTHHHH
T ss_pred ceEeeccCCCCChHHHHHHHHhh--hcccCceeeeeeecchhHHHHHHHHhhccCCcceeeeecccccCccHHHHHHHHH
Confidence 34889999999999999875442 2334457778877765432 2333333322000 00000 11123
Q ss_pred HHHHHHHHh--cCceEEEEEeCcc
Q 002362 265 LIKHIYESV--AGMCFLLVLDDVW 286 (930)
Q Consensus 265 ~~~~l~~~l--~~kr~LlVlDdv~ 286 (930)
..-.+.+++ ++++.|+++||+-
T Consensus 146 ~a~tiAEyfrd~G~~Vlll~Dslt 169 (276)
T d1fx0a3 146 TGAALAEYFMYRERHTLIIYDDLS 169 (276)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECHH
T ss_pred HHHHHHHHHHHcCCceeEEeeccH
Confidence 334445555 5899999999994
No 132
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=93.29 E-value=0.016 Score=53.73 Aligned_cols=21 Identities=29% Similarity=0.286 Sum_probs=18.8
Q ss_pred EEEEEecCCChHHHHHHHHhc
Q 002362 199 IISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.|.|.|++|+||||+|+.+++
T Consensus 5 ~I~i~GppGsGKsT~a~~La~ 25 (189)
T d1zaka1 5 KVMISGAPASGKGTQCELIKT 25 (189)
T ss_dssp CEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 477999999999999998866
No 133
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=93.13 E-value=0.073 Score=54.29 Aligned_cols=51 Identities=18% Similarity=0.122 Sum_probs=34.9
Q ss_pred EEEEEEecCCChHHHHHHHHhchHHHHhcC---CeEEEEEeCCCccHHHHHHHHHH
Q 002362 198 HIISIIGMGGMGKTTLAQLACNHEEVKRKF---DKILWVCVSETFEEFRVAKAIVE 250 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F---~~~~wv~vs~~~~~~~~~~~i~~ 250 (930)
++..|.|.+|.||||++..+... +...+ ...+.++.........+...+..
T Consensus 164 ~~~vI~G~pGTGKTt~i~~~l~~--l~~~~~~~~~~I~l~ApTgkAA~~L~e~~~~ 217 (359)
T d1w36d1 164 RISVISGGPGTGKTTTVAKLLAA--LIQMADGERCRIRLAAPTGKAAARLTESLGK 217 (359)
T ss_dssp SEEEEECCTTSTHHHHHHHHHHH--HHHTCSSCCCCEEEEBSSHHHHHHHHHHHTH
T ss_pred CeEEEEcCCCCCceehHHHHHHH--HHHHHhccCCeEEEecCcHHHHHHHHHHHHH
Confidence 58999999999999998766542 22222 35788888776655555555444
No 134
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=93.03 E-value=0.023 Score=52.43 Aligned_cols=21 Identities=29% Similarity=0.406 Sum_probs=17.8
Q ss_pred EEEEEecCCChHHHHHHHHhc
Q 002362 199 IISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.|.|+|++|+||||+|+.++.
T Consensus 8 rIiliG~PGSGKtT~a~~La~ 28 (189)
T d2ak3a1 8 RAAIMGAPGSGKGTVSSRITK 28 (189)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHH
Confidence 455779999999999998876
No 135
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=92.98 E-value=0.021 Score=54.45 Aligned_cols=43 Identities=21% Similarity=0.238 Sum_probs=29.6
Q ss_pred EEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHHHHHHHHHHHhcC
Q 002362 199 IISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEFRVAKAIVEALDG 254 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~~~~i~~~l~~ 254 (930)
+|+|-|++|+||||+|+.+.. +|... + .+.-++++.++.....
T Consensus 5 ~IaIdGp~GsGKgT~ak~La~------~lg~~-~------istGdl~R~~a~~~~~ 47 (223)
T d1q3ta_ 5 QIAIDGPASSGKSTVAKIIAK------DFGFT-Y------LDTGAMYRAATYMALK 47 (223)
T ss_dssp EEEEECSSCSSHHHHHHHHHH------HHCCE-E------EEHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHH------HhCCc-E------ECHHHHHHHHHHHHHH
Confidence 688999999999999998876 34322 1 2345677766655443
No 136
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.98 E-value=0.079 Score=50.92 Aligned_cols=48 Identities=21% Similarity=0.220 Sum_probs=34.0
Q ss_pred CeEEEEEEecCCChHHHHHHHHhchHHHHhc----CCeEEEEEeCCCccHHH
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNHEEVKRK----FDKILWVCVSETFEEFR 243 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~----F~~~~wv~vs~~~~~~~ 243 (930)
.-+++.|+|.+|+||||+|.++......... -...+|+.....++...
T Consensus 33 ~G~~~li~G~pGsGKT~l~lq~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 84 (251)
T d1szpa2 33 TGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVR 84 (251)
T ss_dssp SSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEESSSCCCGGG
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHhhhhhhhccCCceEEEEeecchHHHHH
Confidence 4579999999999999999888764222211 24678888776665443
No 137
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=92.94 E-value=0.02 Score=52.56 Aligned_cols=20 Identities=30% Similarity=0.396 Sum_probs=18.4
Q ss_pred EEEEecCCChHHHHHHHHhc
Q 002362 200 ISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~ 219 (930)
|.|.|++|+||||+|+.++.
T Consensus 3 I~i~G~pGsGKsT~a~~La~ 22 (181)
T d2cdna1 3 VLLLGPPGAGKGTQAVKLAE 22 (181)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 67889999999999999876
No 138
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=92.92 E-value=0.021 Score=52.34 Aligned_cols=20 Identities=35% Similarity=0.547 Sum_probs=18.5
Q ss_pred EEEEecCCChHHHHHHHHhc
Q 002362 200 ISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~ 219 (930)
|.|.|++|+||||+|+.++.
T Consensus 3 I~i~G~pGSGKsT~a~~La~ 22 (182)
T d1s3ga1 3 IVLMGLPGAGKGTQADRIVE 22 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 67899999999999998886
No 139
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=92.89 E-value=0.056 Score=54.25 Aligned_cols=63 Identities=17% Similarity=0.158 Sum_probs=34.3
Q ss_pred HHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEe--CCCccHHHHHHH
Q 002362 179 KNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCV--SETFEEFRVAKA 247 (930)
Q Consensus 179 ~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v--s~~~~~~~~~~~ 247 (930)
..++++.+.... .+..+|+|.|.+|+|||||...+... ....-..+.-+.+ +..++--.++.+
T Consensus 40 ~~~ll~~~~~~~----~~~~~IgitG~pGaGKSTLi~~l~~~--~~~~g~~vavlavDpss~~~ggailgd 104 (327)
T d2p67a1 40 STQLLDAIMPYC----GNTLRLGVTGTPGAGKSTFLEAFGML--LIREGLKVAVIAVDPSSPVTGGSILGD 104 (327)
T ss_dssp HHHHHHHHGGGC----SCSEEEEEEECTTSCHHHHHHHHHHH--HHHTTCCEEEEEECCC-----------
T ss_pred HHHHHHHhhhcc----CCceEEEeeCCCCCCHHHHHHHHHHH--HHhcCCceeeecCCCceeeeccccccc
Confidence 345555554332 36899999999999999999988763 3333334444444 334443344443
No 140
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=92.87 E-value=0.02 Score=58.47 Aligned_cols=45 Identities=27% Similarity=0.306 Sum_probs=32.7
Q ss_pred cCCceecchhhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHh
Q 002362 168 DEEEICGRVDEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLAC 218 (930)
Q Consensus 168 ~~~~~vGr~~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~ 218 (930)
+=.+++|.+..+..+.-..... +..-|.|+|.+|+||||||+.+.
T Consensus 5 ~f~~I~Gq~~~kral~laa~~~------~~h~vLl~G~pG~GKT~lar~~~ 49 (333)
T d1g8pa_ 5 PFSAIVGQEDMKLALLLTAVDP------GIGGVLVFGDRGTGKSTAVRALA 49 (333)
T ss_dssp CGGGSCSCHHHHHHHHHHHHCG------GGCCEEEECCGGGCTTHHHHHHH
T ss_pred ChhhccCcHHHHHHHHHHHhcc------CCCeEEEECCCCccHHHHHHHHH
Confidence 3457899988777655444321 12348999999999999999885
No 141
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=92.86 E-value=0.05 Score=54.59 Aligned_cols=39 Identities=21% Similarity=0.302 Sum_probs=29.4
Q ss_pred hHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhch
Q 002362 178 EKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 178 ~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
...++++.+.... .+..+|+|.|++|+|||||.-.+...
T Consensus 36 ~~~~~~~~~~~~~----~~~~~igitG~pGaGKSTli~~l~~~ 74 (323)
T d2qm8a1 36 AVRDLIDAVLPQT----GRAIRVGITGVPGVGKSTTIDALGSL 74 (323)
T ss_dssp HHHHHHHHHGGGC----CCSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcc----CCceEEeeeCCCCCCHHHHHHHHHHH
Confidence 3455555554432 36789999999999999999988763
No 142
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=92.83 E-value=0.05 Score=54.07 Aligned_cols=38 Identities=26% Similarity=0.333 Sum_probs=27.7
Q ss_pred EEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCC
Q 002362 198 HIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSE 237 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~ 237 (930)
+.|+|+|-||+||||+|-.+..- ....=..++-|.+..
T Consensus 3 r~IaisgKGGVGKTT~a~NLA~~--LA~~G~rVLlID~Dp 40 (289)
T d2afhe1 3 RQCAIYGKGGIGKSTTTQNLVAA--LAEMGKKVMIVGCDP 40 (289)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHH--HHHTTCCEEEEEECS
T ss_pred cEEEEECCCCCCHHHHHHHHHHH--HHHCCCCEEEEecCC
Confidence 57789999999999999888763 333333566677643
No 143
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.73 E-value=0.018 Score=53.27 Aligned_cols=21 Identities=29% Similarity=0.409 Sum_probs=18.8
Q ss_pred EEEEEecCCChHHHHHHHHhc
Q 002362 199 IISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.|.|+|+.|+|||||++.+..
T Consensus 2 pIvl~GPsGsGK~tl~~~L~~ 22 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTLLKKLFQ 22 (190)
T ss_dssp CEEEECCTTSSHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHH
Confidence 377999999999999998876
No 144
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=92.68 E-value=0.023 Score=52.13 Aligned_cols=22 Identities=18% Similarity=0.406 Sum_probs=19.7
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
++|.|+|+.|+|||||++.+..
T Consensus 3 ~iivl~GpsG~GK~tl~~~L~~ 24 (182)
T d1znwa1 3 RVVVLSGPSAVGKSTVVRCLRE 24 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHh
Confidence 5788999999999999998765
No 145
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=92.65 E-value=0.031 Score=51.66 Aligned_cols=22 Identities=45% Similarity=0.480 Sum_probs=19.6
Q ss_pred CeEEEEEEecCCChHHHHHHHH
Q 002362 196 GLHIISIIGMGGMGKTTLAQLA 217 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v 217 (930)
.+-+|+|.|..|+||||+|..+
T Consensus 2 ~p~IIgitG~~gSGKstva~~l 23 (191)
T d1uf9a_ 2 HPIIIGITGNIGSGKSTVAALL 23 (191)
T ss_dssp CCEEEEEEECTTSCHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHH
Confidence 4578999999999999999866
No 146
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=92.64 E-value=0.033 Score=54.41 Aligned_cols=80 Identities=16% Similarity=0.103 Sum_probs=41.6
Q ss_pred CeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCC--ccHHHHHHHHHHHh-------cCCCCCCccHHHHH
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSET--FEEFRVAKAIVEAL-------DGHESRLGEFQSLI 266 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~--~~~~~~~~~i~~~l-------~~~~~~~~~~~~~~ 266 (930)
+..||+|.|..|+||||+|+.+.+ ..+..=-..+.++...- ++....-..+...- .-..++..+.+.+.
T Consensus 3 k~pIIgIaG~SGSGKTTva~~l~~--i~~~~~v~~~iI~~Dsfyr~~R~~~~~~~~~~~~~~~~~~~~~~P~A~d~dlL~ 80 (288)
T d1a7ja_ 3 KHPIISVTGSSGAGTSTVKHTFDQ--IFRREGVKAVSIEGDAFHRFNRADMKAELDRRYAAGDATFSHFSYEANELKELE 80 (288)
T ss_dssp TSCEEEEESCC---CCTHHHHHHH--HHHHHTCCEEEEEGGGGBSCCHHHHHHHHHHHHHHTCTTCSTTSGGGBCHHHHH
T ss_pred CCCEEEEECCCCCcHHHHHHHHHH--HHhhcCCCeEEEeCCCCCccchhhhhhhhhhhhhhhccCCCCCCcccccHHHHH
Confidence 445999999999999999998876 23222112333443321 23333222222211 11234556777777
Q ss_pred HHHHHHhcCce
Q 002362 267 KHIYESVAGMC 277 (930)
Q Consensus 267 ~~l~~~l~~kr 277 (930)
+.+..+.+++.
T Consensus 81 ~~l~~L~~g~~ 91 (288)
T d1a7ja_ 81 RVFREYGETGQ 91 (288)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHCCCc
Confidence 77777665543
No 147
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=92.39 E-value=0.054 Score=51.70 Aligned_cols=37 Identities=24% Similarity=0.294 Sum_probs=29.7
Q ss_pred EEEEEE-ecCCChHHHHHHHHhchHHHHhcCCeEEEEEeC
Q 002362 198 HIISII-GMGGMGKTTLAQLACNHEEVKRKFDKILWVCVS 236 (930)
Q Consensus 198 ~vi~I~-G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs 236 (930)
|||+|+ |-||+||||+|..++. .....-..+++|.+.
T Consensus 2 kvIav~s~KGGvGKTtia~nlA~--~la~~g~~VlliD~D 39 (232)
T d1hyqa_ 2 RTITVASGKGGTGKTTITANLGV--ALAQLGHDVTIVDAD 39 (232)
T ss_dssp EEEEEEESSSCSCHHHHHHHHHH--HHHHTTCCEEEEECC
T ss_pred EEEEEECCCCCChHHHHHHHHHH--HHHhCCCCEEEEeCC
Confidence 788888 7899999999999987 445554578888875
No 148
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.35 E-value=0.022 Score=52.44 Aligned_cols=21 Identities=38% Similarity=0.428 Sum_probs=19.0
Q ss_pred EEEEEecCCChHHHHHHHHhc
Q 002362 199 IISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.|.|+|+.|+|||||++.+.+
T Consensus 3 pIvl~GpsG~GK~tl~~~L~~ 23 (186)
T d1gkya_ 3 PIVISGPSGTGKSTLLKKLFA 23 (186)
T ss_dssp CEEEECCTTSSHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHH
Confidence 478999999999999998866
No 149
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.35 E-value=0.026 Score=51.61 Aligned_cols=22 Identities=32% Similarity=0.462 Sum_probs=18.4
Q ss_pred eEEEEEEecCCChHHHHHHHHhc
Q 002362 197 LHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 197 ~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.+++ |.|++|+||||+|+.++.
T Consensus 3 mrIv-l~G~pGSGKtT~a~~La~ 24 (180)
T d1akya1 3 IRMV-LIGPPGAGKGTQAPNLQE 24 (180)
T ss_dssp CEEE-EECCTTSSHHHHHHHHHH
T ss_pred eEEE-EECCCCCCHHHHHHHHHH
Confidence 4444 779999999999999876
No 150
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=92.21 E-value=0.033 Score=51.73 Aligned_cols=26 Identities=27% Similarity=0.128 Sum_probs=22.5
Q ss_pred CCCeEEEEEEecCCChHHHHHHHHhc
Q 002362 194 PKGLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 194 ~~~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
+.+.-+|+|-|.-|+||||+|+.+..
T Consensus 6 ~~kp~~I~ieG~~GsGKTTl~~~L~~ 31 (197)
T d2vp4a1 6 GTQPFTVLIEGNIGSGKTTYLNHFEK 31 (197)
T ss_dssp TCCCEEEEEECSTTSCHHHHHHTTGG
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHH
Confidence 34667999999999999999998865
No 151
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=92.09 E-value=0.031 Score=51.01 Aligned_cols=20 Identities=35% Similarity=0.401 Sum_probs=18.0
Q ss_pred EEEEecCCChHHHHHHHHhc
Q 002362 200 ISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~ 219 (930)
|.|.|++|+||||+|+.++.
T Consensus 3 I~i~G~pGSGKsT~~~~La~ 22 (179)
T d1e4va1 3 IILLGAPVAGKGTQAQFIME 22 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 66899999999999998875
No 152
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=91.72 E-value=0.36 Score=46.70 Aligned_cols=101 Identities=17% Similarity=0.089 Sum_probs=54.7
Q ss_pred HHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhc-CC-----eEEEEEeCCCccH-HHHHHHHHHHhc
Q 002362 181 ELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRK-FD-----KILWVCVSETFEE-FRVAKAIVEALD 253 (930)
Q Consensus 181 ~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~-F~-----~~~wv~vs~~~~~-~~~~~~i~~~l~ 253 (930)
+.++.|..-. .-.-++|+|.+|+|||+|+..+......... -+ .++++-+.+.... .++...+...-.
T Consensus 57 raID~l~pig-----~GQr~~If~~~g~GKt~ll~~~~~~~~~~~~~~~~~~~~~~v~~~IGer~~E~~e~~~~~~~~~~ 131 (285)
T d2jdia3 57 KAVDSLVPIG-----RGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADA 131 (285)
T ss_dssp HHHHHHSCCB-----TTCBCEEEESTTSSHHHHHHHHHHHTHHHHTSSCTTTCCEEEEEEESCCHHHHHHHHHHHHHTTC
T ss_pred eEEecccCcc-----CCCEEEeecCCCCChHHHHHHHHHhHHhhccccccccceEEEEeeeCccHHHHHHHHHHhccccc
Confidence 5566665432 2346899999999999999877664222111 11 3566666665433 344444333211
Q ss_pred CC-------CCCCccHH-----HHHHHHHHHh--cCceEEEEEeCcc
Q 002362 254 GH-------ESRLGEFQ-----SLIKHIYESV--AGMCFLLVLDDVW 286 (930)
Q Consensus 254 ~~-------~~~~~~~~-----~~~~~l~~~l--~~kr~LlVlDdv~ 286 (930)
.. ..+..... ...-.+.+++ ++|.+|+++||+-
T Consensus 132 ~~~tvvv~~ts~~~~~~r~~~~~~a~tiAEyfrd~G~~VLll~Dslt 178 (285)
T d2jdia3 132 MKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLS 178 (285)
T ss_dssp GGGEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHTTCEEEEEEETHH
T ss_pred ccceEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCcEEEEEcChH
Confidence 00 11111111 1122234444 6899999999993
No 153
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.66 E-value=0.036 Score=50.41 Aligned_cols=22 Identities=14% Similarity=0.439 Sum_probs=19.7
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
+.|.|+|+.|+|||||++.+..
T Consensus 4 k~ivl~Gpsg~GK~tl~~~L~~ 25 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLIT 25 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHH
T ss_pred CcEEEECCCCCCHHHHHHHHHH
Confidence 5789999999999999998765
No 154
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=91.31 E-value=0.4 Score=46.65 Aligned_cols=54 Identities=15% Similarity=0.145 Sum_probs=35.5
Q ss_pred EEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHHHHHHHHHHHhcC
Q 002362 198 HIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEFRVAKAIVEALDG 254 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~~~~i~~~l~~ 254 (930)
.++.|.|.+|+||||+|..+..+.-.... ..+++++.. .+...+...++.....
T Consensus 36 ~l~vi~G~~G~GKT~~~~~la~~~a~~~g-~~v~~~s~E--~~~~~~~~r~~~~~~~ 89 (277)
T d1cr2a_ 36 EVIMVTSGSGMGKSTFVRQQALQWGTAMG-KKVGLAMLE--ESVEETAEDLIGLHNR 89 (277)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHHHTSC-CCEEEEESS--SCHHHHHHHHHHHHTT
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhhhhhcc-cceeEeeec--cchhhHHhHHHHHhhc
Confidence 57889999999999999888763222222 245555544 4566666666665544
No 155
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=91.29 E-value=0.27 Score=46.95 Aligned_cols=56 Identities=18% Similarity=0.246 Sum_probs=35.7
Q ss_pred CeEEEEEEecCCChHHHHHHHHhchHHHHh--------------cCCeEEEEEeCCCccHHHHHHHHHHHh
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNHEEVKR--------------KFDKILWVCVSETFEEFRVAKAIVEAL 252 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~--------------~F~~~~wv~vs~~~~~~~~~~~i~~~l 252 (930)
.-.++.|.|.+|+|||++|..++.+....+ ....+.|+.....++.. ....+...+
T Consensus 33 ~G~l~~i~G~~G~GKT~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~~~~~-~~~~~~~~~ 102 (258)
T d2i1qa2 33 SQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPKAVYIDTEGTFRPE-RIMQMAEHA 102 (258)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHHTTCGGGEECCTTTSCTTTTSSEEEEEEESSSCCCHH-HHHHHHHHH
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHhcCCCceEEeecccchhcCceEEEEEecCCcCHH-HHHHHHhhc
Confidence 457999999999999999999876422111 11246788776555533 333444443
No 156
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=91.07 E-value=0.052 Score=51.52 Aligned_cols=22 Identities=36% Similarity=0.554 Sum_probs=20.5
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.+++|+|+.|.|||||++.++-
T Consensus 32 e~~~iiG~sGsGKSTLl~~i~G 53 (240)
T d3dhwc1 32 QIYGVIGASGAGKSTLIRCVNL 53 (240)
T ss_dssp CEEEEEESTTSSHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHcC
Confidence 5899999999999999999876
No 157
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=90.99 E-value=0.048 Score=52.50 Aligned_cols=21 Identities=38% Similarity=0.533 Sum_probs=19.5
Q ss_pred EEEEEecCCChHHHHHHHHhc
Q 002362 199 IISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~ 219 (930)
||+|.|+.|+|||||...+..
T Consensus 2 vi~v~G~~GsGKTTLl~~ll~ 22 (244)
T d1yrba1 2 IVVFVGTAGSGKTTLTGEFGR 22 (244)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEcCCCCcHHHHHHHHHH
Confidence 799999999999999999875
No 158
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=90.95 E-value=0.043 Score=50.88 Aligned_cols=22 Identities=32% Similarity=0.582 Sum_probs=20.5
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.+++|+|+.|+|||||.+.++.
T Consensus 28 ei~~l~G~NGsGKSTLl~~i~g 49 (200)
T d1sgwa_ 28 NVVNFHGPNGIGKTTLLKTIST 49 (200)
T ss_dssp CCEEEECCTTSSHHHHHHHHTT
T ss_pred CEEEEECCCCChHHHHHHHHhc
Confidence 5899999999999999999976
No 159
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=90.93 E-value=0.26 Score=42.00 Aligned_cols=52 Identities=13% Similarity=0.105 Sum_probs=35.8
Q ss_pred CCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHHHHHHHHHHHh
Q 002362 195 KGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEFRVAKAIVEAL 252 (930)
Q Consensus 195 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~~~~i~~~l 252 (930)
++.++..|+++.|.|||+++-.++. ....++.+.+....-.....+.+.+.+
T Consensus 6 ~~~~~~ll~apTGsGKT~~~~~~~~------~~~~~vli~~P~~~l~~q~~~~~~~~~ 57 (136)
T d1a1va1 6 QSFQVAHLHAPTGSGKSTKVPAAYA------AQGYKVLVLNPSVAATLGFGAYMSKAH 57 (136)
T ss_dssp SSCEEEEEECCTTSCTTTHHHHHHH------TTTCCEEEEESCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCHHHHHHHHHH------HcCCcEEEEcChHHHHHHHHHHHHHHh
Confidence 4678899999999999998865543 345567777766554555555555544
No 160
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=90.89 E-value=0.053 Score=51.45 Aligned_cols=22 Identities=27% Similarity=0.526 Sum_probs=20.3
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.+++|+|+.|.|||||++.++-
T Consensus 30 e~~~liG~sGaGKSTll~~i~g 51 (240)
T d1g2912 30 EFMILLGPSGCGKTTTLRMIAG 51 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCChHHHHHHHHhc
Confidence 5899999999999999999965
No 161
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=90.87 E-value=0.15 Score=48.50 Aligned_cols=41 Identities=17% Similarity=0.084 Sum_probs=28.2
Q ss_pred CeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCC
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSE 237 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~ 237 (930)
.-.++.|+|.+|+|||++|.+++.. .....-..++|++...
T Consensus 25 ~G~~~~I~G~~G~GKT~la~~~~~~-~~~~~~~~~~~~s~e~ 65 (242)
T d1tf7a1 25 IGRSTLVSGTSGTGKTLFSIQFLYN-GIIEFDEPGVFVTFEE 65 (242)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHH-HHHHHCCCEEEEESSS
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHH-HHHhcCCCcccccccC
Confidence 4578999999999999999776542 2222333566766544
No 162
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=90.62 E-value=0.059 Score=51.86 Aligned_cols=22 Identities=32% Similarity=0.649 Sum_probs=20.2
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.+++|+|+.|.|||||++.+..
T Consensus 42 e~iaivG~sGsGKSTLl~ll~g 63 (253)
T d3b60a1 42 KTVALVGRSGSGKSTIASLITR 63 (253)
T ss_dssp CEEEEEECTTSSHHHHHHHHTT
T ss_pred CEEEEECCCCChHHHHHHHHhc
Confidence 5899999999999999999865
No 163
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=90.62 E-value=0.076 Score=54.15 Aligned_cols=25 Identities=28% Similarity=0.102 Sum_probs=22.6
Q ss_pred CCeEEEEEEecCCChHHHHHHHHhc
Q 002362 195 KGLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 195 ~~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
+..+.+.++|++|+|||++|+.+++
T Consensus 152 ~~~~~~~~~g~~~~gk~~~~~~~~~ 176 (362)
T d1svma_ 152 PKKRYWLFKGPIDSGKTTLAAALLE 176 (362)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHH
T ss_pred CCcCeEEEECCCCCCHHHHHHHHHH
Confidence 3567899999999999999999988
No 164
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=90.53 E-value=0.058 Score=52.02 Aligned_cols=23 Identities=39% Similarity=0.479 Sum_probs=20.8
Q ss_pred eEEEEEEecCCChHHHHHHHHhc
Q 002362 197 LHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 197 ~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
-.+++|+|+.|.|||||++.+.-
T Consensus 28 GEi~~iiG~sGsGKSTLl~~i~G 50 (258)
T d1b0ua_ 28 GDVISIIGSSGSGKSTFLRCINF 50 (258)
T ss_dssp TCEEEEECCTTSSHHHHHHHHTT
T ss_pred CCEEEEECCCCCcHHHHHHHHHc
Confidence 35899999999999999999975
No 165
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=90.49 E-value=0.17 Score=48.65 Aligned_cols=50 Identities=24% Similarity=0.357 Sum_probs=35.3
Q ss_pred CCeEEEEEEecCCChHHHHHHHHhchHHH----HhcCCeEEEEEeCCCccHHHH
Q 002362 195 KGLHIISIIGMGGMGKTTLAQLACNHEEV----KRKFDKILWVCVSETFEEFRV 244 (930)
Q Consensus 195 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~~----~~~F~~~~wv~vs~~~~~~~~ 244 (930)
+.-+++.|+|.+|+||||+|.++...... .......+|+......+...+
T Consensus 34 p~G~~~li~G~pGsGKT~~~lq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (254)
T d1pzna2 34 ETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIWIDTENTFRPERI 87 (254)
T ss_dssp ESSEEEEEEESTTSSHHHHHHHHHHHTTSCGGGTSCSCEEEEEESSSCCCHHHH
T ss_pred cCCEEEEEEcCCCCCHHHHHHHHHHHhhchHHhcCCCceEEEEeccchhHHHHH
Confidence 35679999999999999999988763211 122356888887776665443
No 166
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=90.40 E-value=0.5 Score=43.74 Aligned_cols=35 Identities=23% Similarity=0.424 Sum_probs=25.3
Q ss_pred EEEEEEecCCChHHHHHHHHhchHHHHhc-CCeEEEEE
Q 002362 198 HIISIIGMGGMGKTTLAQLACNHEEVKRK-FDKILWVC 234 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~-F~~~~wv~ 234 (930)
+.|+|-|..|+||||+++.+.+ ..... +..+++..
T Consensus 3 kfIviEG~dGsGKsT~~~~L~~--~L~~~g~~~~~~~~ 38 (210)
T d4tmka_ 3 KYIVIEGLEGAGKTTARNVVVE--TLEQLGIRDMVFTR 38 (210)
T ss_dssp CEEEEEECTTSCHHHHHHHHHH--HHHHTTCCCEEEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHH--HHHhCCCCeEEEec
Confidence 4688999999999999999977 33333 44454443
No 167
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=90.38 E-value=0.057 Score=47.84 Aligned_cols=21 Identities=29% Similarity=0.335 Sum_probs=18.7
Q ss_pred EEEEecCCChHHHHHHHHhch
Q 002362 200 ISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~~ 220 (930)
|.|+|.+|+|||||...+..+
T Consensus 3 ivlvG~~~vGKSsLi~~l~~~ 23 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLG 23 (160)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 669999999999999998764
No 168
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=90.24 E-value=0.058 Score=50.23 Aligned_cols=22 Identities=23% Similarity=0.324 Sum_probs=19.7
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.++.|+|+.|+|||||.+.+..
T Consensus 3 ~livi~GPSG~GK~tl~~~L~~ 24 (205)
T d1s96a_ 3 TLYIVSAPSGAGKSSLIQALLK 24 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHh
Confidence 4788999999999999998865
No 169
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.20 E-value=0.071 Score=51.18 Aligned_cols=24 Identities=33% Similarity=0.436 Sum_probs=21.4
Q ss_pred CeEEEEEEecCCChHHHHHHHHhc
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
+++.|+|-|.-|+||||+++.+.+
T Consensus 1 ~pk~IviEG~~GsGKST~~~~L~~ 24 (241)
T d2ocpa1 1 GPRRLSIEGNIAVGKSTFVKLLTK 24 (241)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHH
T ss_pred CCeEEEEECCCCCcHHHHHHHHHH
Confidence 368999999999999999998865
No 170
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=90.17 E-value=0.067 Score=50.64 Aligned_cols=22 Identities=27% Similarity=0.543 Sum_probs=20.2
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.+++|+|+.|.|||||.+.+.-
T Consensus 33 e~~~liGpsGaGKSTLl~~i~G 54 (239)
T d1v43a3 33 EFLVLLGPSGCGKTTTLRMIAG 54 (239)
T ss_dssp CEEEEECCTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCChHHHHHHHHHc
Confidence 5899999999999999999865
No 171
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=90.12 E-value=0.44 Score=46.27 Aligned_cols=22 Identities=27% Similarity=0.436 Sum_probs=19.3
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.+..|+|.+|+||||||..++-
T Consensus 30 ~~~~i~G~~G~GKS~l~l~la~ 51 (274)
T d1nlfa_ 30 TVGALVSPGGAGKSMLALQLAA 51 (274)
T ss_dssp SEEEEEESTTSSHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHH
Confidence 4778999999999999988765
No 172
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=89.90 E-value=0.083 Score=48.75 Aligned_cols=26 Identities=27% Similarity=0.447 Sum_probs=22.5
Q ss_pred CCeEEEEEEecCCChHHHHHHHHhch
Q 002362 195 KGLHIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 195 ~~~~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
.++..|+|+|.+|+|||||...+.+.
T Consensus 21 ~~~~~I~lvG~~n~GKSTLin~L~g~ 46 (195)
T d1svia_ 21 GGLPEIALAGRSNVGKSSFINSLINR 46 (195)
T ss_dssp SCCCEEEEEEBTTSSHHHHHHHHHTC
T ss_pred CCCCEEEEECCCCCCHHHHHHHhcCC
Confidence 35667999999999999999999863
No 173
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=89.75 E-value=0.067 Score=50.26 Aligned_cols=22 Identities=32% Similarity=0.502 Sum_probs=20.3
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.+++|+|+.|.|||||.+.+.-
T Consensus 27 e~~~liGpsGaGKSTll~~l~G 48 (229)
T d3d31a2 27 EYFVILGPTGAGKTLFLELIAG 48 (229)
T ss_dssp CEEEEECCCTHHHHHHHHHHHT
T ss_pred CEEEEECCCCCcHHHHHHHHhc
Confidence 4899999999999999999865
No 174
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.67 E-value=0.078 Score=51.86 Aligned_cols=23 Identities=35% Similarity=0.476 Sum_probs=20.7
Q ss_pred eEEEEEEecCCChHHHHHHHHhc
Q 002362 197 LHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 197 ~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
-.+++|+|+.|.|||||++.+..
T Consensus 62 Ge~vaivG~nGsGKSTLl~~i~G 84 (281)
T d1r0wa_ 62 GEMLAITGSTGSGKTSLLMLILG 84 (281)
T ss_dssp TCEEEEEESTTSSHHHHHHHHHT
T ss_pred CCEEEEECCCCChHHHHHHHHhC
Confidence 35899999999999999999875
No 175
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.62 E-value=0.06 Score=51.67 Aligned_cols=23 Identities=30% Similarity=0.358 Sum_probs=20.9
Q ss_pred eEEEEEEecCCChHHHHHHHHhc
Q 002362 197 LHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 197 ~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.+.|+|-|+-|+||||+|+.+..
T Consensus 2 ~k~I~ieG~dGsGKST~~~~L~~ 24 (241)
T d1p5zb_ 2 IKKISIEGNIAAGKSTFVNILKQ 24 (241)
T ss_dssp CEEEEEECSTTSSHHHHHTTTGG
T ss_pred CCEEEEECCCCCCHHHHHHHHHH
Confidence 47899999999999999998766
No 176
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=89.56 E-value=0.07 Score=47.65 Aligned_cols=21 Identities=38% Similarity=0.468 Sum_probs=18.8
Q ss_pred EEEEecCCChHHHHHHHHhch
Q 002362 200 ISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~~ 220 (930)
|+|+|.+|+|||||.+.+.++
T Consensus 8 I~ivG~~~vGKSSLi~~~~~~ 28 (169)
T d1upta_ 8 ILILGLDGAGKTTILYRLQVG 28 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 779999999999999988664
No 177
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=89.50 E-value=0.15 Score=48.59 Aligned_cols=37 Identities=38% Similarity=0.434 Sum_probs=28.7
Q ss_pred EEEEEE-ecCCChHHHHHHHHhchHHHHhcCCeEEEEEeC
Q 002362 198 HIISII-GMGGMGKTTLAQLACNHEEVKRKFDKILWVCVS 236 (930)
Q Consensus 198 ~vi~I~-G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs 236 (930)
+||+|+ +-||+||||+|..++. .....-..++-|...
T Consensus 3 ~vIav~~~kGGvGKTtia~nLA~--~la~~g~~VlliD~D 40 (237)
T d1g3qa_ 3 RIISIVSGKGGTGKTTVTANLSV--ALGDRGRKVLAVDGD 40 (237)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHH--HHHHTTCCEEEEECC
T ss_pred eEEEEECCCCCCcHHHHHHHHHH--HHHhCCCCEEEEeCC
Confidence 689999 6899999999999987 344444567777764
No 178
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.20 E-value=0.078 Score=47.36 Aligned_cols=22 Identities=36% Similarity=0.504 Sum_probs=19.3
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|.++|.+|+|||||+..+.++
T Consensus 4 Kv~liG~~~vGKTsLl~~~~~~ 25 (165)
T d1z06a1 4 KIIVIGDSNVGKTCLTYRFCAG 25 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3779999999999999988764
No 179
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.01 E-value=0.08 Score=47.77 Aligned_cols=22 Identities=32% Similarity=0.372 Sum_probs=19.0
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|.|+|.+|+|||||+..+.++
T Consensus 5 KivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 5 KYIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHhcC
Confidence 3678999999999999988764
No 180
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=89.01 E-value=0.16 Score=47.14 Aligned_cols=21 Identities=38% Similarity=0.612 Sum_probs=19.3
Q ss_pred EEEEEecCCChHHHHHHHHhc
Q 002362 199 IISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.|+|-|.-|+||||+++.+.+
T Consensus 2 lI~ieG~dGsGKST~~~~L~~ 22 (208)
T d1gsia_ 2 LIAIEGVDGAGKRTLVEKLSG 22 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 588999999999999999887
No 181
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=88.87 E-value=0.12 Score=52.78 Aligned_cols=24 Identities=38% Similarity=0.418 Sum_probs=20.9
Q ss_pred CeEEEEEEecCCChHHHHHHHHhc
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
....+..+|+.|+|||.||+.++.
T Consensus 67 p~~niLfiGPTGvGKTElAk~LA~ 90 (364)
T d1um8a_ 67 SKSNILLIGPTGSGKTLMAQTLAK 90 (364)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHH
T ss_pred CCcceeeeCCCCccHHHHHHHHHh
Confidence 456688999999999999998875
No 182
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.84 E-value=0.085 Score=47.17 Aligned_cols=22 Identities=32% Similarity=0.359 Sum_probs=18.9
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|.|+|.+|+|||||++.+.++
T Consensus 6 KivlvG~~~vGKTsli~~~~~~ 27 (166)
T d1z0fa1 6 KYIIIGDMGVGKSCLLHQFTEK 27 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3788999999999999988653
No 183
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=88.84 E-value=0.16 Score=46.02 Aligned_cols=25 Identities=24% Similarity=0.389 Sum_probs=20.5
Q ss_pred CeEEEEEEecCCChHHHHHHHHhch
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
+..-|.|+|.+|+|||||...+...
T Consensus 12 k~~kI~lvG~~~vGKTsLl~~l~~~ 36 (186)
T d1f6ba_ 12 KTGKLVFLGLDNAGKTTLLHMLKDD 36 (186)
T ss_dssp CCEEEEEEEETTSSHHHHHHHHSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCC
Confidence 3345779999999999999888664
No 184
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=88.78 E-value=0.096 Score=49.86 Aligned_cols=22 Identities=36% Similarity=0.610 Sum_probs=20.5
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.+++|+|+.|.|||||.+.+.-
T Consensus 33 ei~~liGpnGaGKSTl~~~i~G 54 (240)
T d1ji0a_ 33 QIVTLIGANGAGKTTTLSAIAG 54 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHHTT
T ss_pred CEEEEECCCCCcHHHHHHHHhC
Confidence 5899999999999999999976
No 185
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=88.72 E-value=0.093 Score=46.79 Aligned_cols=21 Identities=24% Similarity=0.441 Sum_probs=18.6
Q ss_pred EEEEecCCChHHHHHHHHhch
Q 002362 200 ISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~~ 220 (930)
|.|+|.+|+|||||.+.+.++
T Consensus 5 i~ivG~~~~GKTsLi~~l~~~ 25 (165)
T d1ksha_ 5 LLMLGLDNAGKTTILKKFNGE 25 (165)
T ss_dssp EEEECSTTSSHHHHHHHHTTC
T ss_pred EEEECCCCCCHHHHHHHHcCC
Confidence 679999999999999988663
No 186
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.70 E-value=0.089 Score=46.91 Aligned_cols=20 Identities=30% Similarity=0.770 Sum_probs=17.9
Q ss_pred EEEEecCCChHHHHHHHHhc
Q 002362 200 ISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~ 219 (930)
|.++|.+|+|||||+..+.+
T Consensus 5 v~liG~~~vGKSsLi~rl~~ 24 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMIQRYCK 24 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 67999999999999988765
No 187
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=88.68 E-value=0.096 Score=48.91 Aligned_cols=20 Identities=35% Similarity=0.454 Sum_probs=18.1
Q ss_pred EEEEEEecCCChHHHHHHHH
Q 002362 198 HIISIIGMGGMGKTTLAQLA 217 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v 217 (930)
.+|+|+|+.|+||||.|+.+
T Consensus 4 ~iIgitG~igSGKStv~~~l 23 (208)
T d1vhta_ 4 YIVALTGGIGSGKSTVANAF 23 (208)
T ss_dssp EEEEEECCTTSCHHHHHHHH
T ss_pred EEEEEECCCcCCHHHHHHHH
Confidence 48999999999999999865
No 188
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.66 E-value=0.095 Score=47.09 Aligned_cols=21 Identities=29% Similarity=0.623 Sum_probs=18.4
Q ss_pred EEEEecCCChHHHHHHHHhch
Q 002362 200 ISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~~ 220 (930)
|.++|.+|+|||||...+.++
T Consensus 5 i~viG~~~vGKTsLi~r~~~~ 25 (171)
T d2erxa1 5 VAVFGAGGVGKSSLVLRFVKG 25 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 578999999999999988764
No 189
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=88.61 E-value=0.15 Score=53.42 Aligned_cols=49 Identities=29% Similarity=0.329 Sum_probs=34.0
Q ss_pred ceecchhhHHHHHHHhcc--------CCCCCCCCeEEEEEEecCCChHHHHHHHHhc
Q 002362 171 EICGRVDEKNELLSKLLC--------ESSDSPKGLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 171 ~~vGr~~~~~~l~~~L~~--------~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.+||.++.++.+.-.+.. ......-..+=|.++|+.|+|||.||+.++.
T Consensus 15 yVvGQ~~AKk~lsvav~nhyrR~~~~~~~~~ei~ksNILliGPTGvGKTlLAr~LAk 71 (443)
T d1g41a_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAK 71 (443)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHHSCTTTTTTCCCCCEEEECCTTSSHHHHHHHHHH
T ss_pred cccCcHHHHHHHHHHHHHHHHHhhcccccccccccccEEEECCCCCCHHHHHHHHHH
Confidence 478888877777665521 1111112345699999999999999999986
No 190
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=88.47 E-value=0.22 Score=44.74 Aligned_cols=23 Identities=30% Similarity=0.456 Sum_probs=19.3
Q ss_pred EEEEEEecCCChHHHHHHHHhch
Q 002362 198 HIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
--|.|+|.+|+|||||...+..+
T Consensus 16 ~kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 16 HKVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHhcC
Confidence 44779999999999999987653
No 191
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.44 E-value=0.099 Score=46.56 Aligned_cols=21 Identities=24% Similarity=0.347 Sum_probs=18.7
Q ss_pred EEEEecCCChHHHHHHHHhch
Q 002362 200 ISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~~ 220 (930)
|.|+|.+|+|||||++.+.++
T Consensus 3 v~vvG~~~vGKTsLi~r~~~~ 23 (164)
T d1yzqa1 3 LVFLGEQSVGKTSLITRFMYD 23 (164)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 788999999999999988754
No 192
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=88.38 E-value=0.1 Score=50.14 Aligned_cols=22 Identities=36% Similarity=0.564 Sum_probs=20.5
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.+++|+|+.|.|||||++.++-
T Consensus 31 ei~~liG~nGaGKSTLl~~i~G 52 (254)
T d1g6ha_ 31 DVTLIIGPNGSGKSTLINVITG 52 (254)
T ss_dssp CEEEEECSTTSSHHHHHHHHTT
T ss_pred CEEEEECCCCCcHHHHHHHHHC
Confidence 5899999999999999999976
No 193
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=88.37 E-value=0.11 Score=46.60 Aligned_cols=22 Identities=27% Similarity=0.412 Sum_probs=19.4
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
.|+|+|.+|+|||||...+...
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~~ 23 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVKK 23 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC-
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 6899999999999999998763
No 194
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.31 E-value=0.27 Score=47.13 Aligned_cols=49 Identities=24% Similarity=0.303 Sum_probs=35.8
Q ss_pred CCeEEEEEEecCCChHHHHHHHHhchHH----HHhcCCeEEEEEeCCCccHHH
Q 002362 195 KGLHIISIIGMGGMGKTTLAQLACNHEE----VKRKFDKILWVCVSETFEEFR 243 (930)
Q Consensus 195 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~----~~~~F~~~~wv~vs~~~~~~~ 243 (930)
..-+++.|+|.+|+|||++|.+++.... ....+..+.|+.....+....
T Consensus 35 p~G~~~~i~G~~GsGKT~lalq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (258)
T d1v5wa_ 35 ESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDR 87 (258)
T ss_dssp CSSEEEEEECCTTCTHHHHHHHHHHHTTSCBTTTBCCCEEEEEESSSCCCHHH
T ss_pred cCCEEEEEECCCCCCHHHHHHHHHHHHHhhhhcccccceEEEechHHHHHHHH
Confidence 4568999999999999999998875321 123456788888777666443
No 195
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.26 E-value=0.1 Score=46.86 Aligned_cols=22 Identities=36% Similarity=0.493 Sum_probs=19.3
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|.|+|.+|+|||||.+.+.++
T Consensus 7 Ki~lvG~~~vGKTsLi~~l~~~ 28 (171)
T d2ew1a1 7 KIVLIGNAGVGKTCLVRRFTQG 28 (171)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4789999999999999988763
No 196
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=88.15 E-value=0.18 Score=45.34 Aligned_cols=23 Identities=30% Similarity=0.442 Sum_probs=19.7
Q ss_pred EEEEEEecCCChHHHHHHHHhch
Q 002362 198 HIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
--|.++|.+|+|||||...+...
T Consensus 17 ~kI~vvG~~~vGKSsLi~~l~~~ 39 (176)
T d1fzqa_ 17 VRILLLGLDNAGKTTLLKQLASE 39 (176)
T ss_dssp EEEEEEESTTSSHHHHHHHHCCS
T ss_pred EEEEEECCCCCCHHHHHHHHhcC
Confidence 34779999999999999988663
No 197
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.88 E-value=0.11 Score=46.57 Aligned_cols=22 Identities=32% Similarity=0.635 Sum_probs=18.9
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|.|+|.+|+|||||++.+.++
T Consensus 5 KivlvG~~~vGKTsLi~r~~~~ 26 (167)
T d1z08a1 5 KVVLLGEGCVGKTSLVLRYCEN 26 (167)
T ss_dssp EEEEECCTTSCHHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3689999999999999987653
No 198
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=87.87 E-value=0.11 Score=46.65 Aligned_cols=22 Identities=32% Similarity=0.385 Sum_probs=19.1
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|.++|.+|+|||||...+.++
T Consensus 7 Ki~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 7 KILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHcC
Confidence 4789999999999999987653
No 199
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=87.87 E-value=0.12 Score=48.16 Aligned_cols=20 Identities=45% Similarity=0.562 Sum_probs=18.3
Q ss_pred EEEEEEecCCChHHHHHHHH
Q 002362 198 HIISIIGMGGMGKTTLAQLA 217 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v 217 (930)
-+|+|.|..|+||||+|+.+
T Consensus 3 ~iIgITG~igSGKStv~~~l 22 (205)
T d1jjva_ 3 YIVGLTGGIGSGKTTIANLF 22 (205)
T ss_dssp EEEEEECSTTSCHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHH
Confidence 58999999999999999866
No 200
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.87 E-value=0.12 Score=46.34 Aligned_cols=22 Identities=27% Similarity=0.511 Sum_probs=19.1
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|.++|.+|+|||||++.+.+.
T Consensus 3 Ki~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 3 KVLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHTC
T ss_pred EEEEECCCCcCHHHHHHHHhCC
Confidence 3778999999999999988764
No 201
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.86 E-value=0.11 Score=46.51 Aligned_cols=21 Identities=19% Similarity=0.453 Sum_probs=18.4
Q ss_pred EEEEecCCChHHHHHHHHhch
Q 002362 200 ISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~~ 220 (930)
|.|+|.+|+|||||.+.+.++
T Consensus 7 i~lvG~~~vGKTsli~rl~~~ 27 (167)
T d1z0ja1 7 VCLLGDTGVGKSSIMWRFVED 27 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 668899999999999988764
No 202
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.82 E-value=0.11 Score=46.68 Aligned_cols=24 Identities=29% Similarity=0.537 Sum_probs=19.9
Q ss_pred eEEEEEEecCCChHHHHHHHHhch
Q 002362 197 LHIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 197 ~~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
.--|.|+|.+|+|||||+..+.++
T Consensus 6 ~~Kv~lvG~~~vGKTsLi~r~~~~ 29 (173)
T d2fn4a1 6 THKLVVVGGGGVGKSALTIQFIQS 29 (173)
T ss_dssp EEEEEEEECTTSSHHHHHHHHHHS
T ss_pred eEEEEEECCCCcCHHHHHHHHHhC
Confidence 345779999999999999987653
No 203
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.72 E-value=0.11 Score=46.40 Aligned_cols=22 Identities=27% Similarity=0.548 Sum_probs=19.1
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|.++|-+|+|||||...+.++
T Consensus 5 Ki~lvG~~~vGKTsLi~r~~~~ 26 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3788999999999999988764
No 204
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.71 E-value=0.12 Score=47.23 Aligned_cols=22 Identities=27% Similarity=0.383 Sum_probs=19.1
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|.|+|.+|+|||||+..+.+.
T Consensus 7 Ki~ivG~~~vGKTsLi~~l~~~ 28 (186)
T d2f7sa1 7 KLLALGDSGVGKTTFLYRYTDN 28 (186)
T ss_dssp EEEEESCTTSSHHHHHHHHHCS
T ss_pred EEEEECCCCcCHHHHHHHHhcC
Confidence 3778999999999999988763
No 205
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.71 E-value=0.11 Score=46.58 Aligned_cols=22 Identities=18% Similarity=0.344 Sum_probs=19.1
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|.|+|.+|+|||||++.+.++
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~~ 29 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFVKG 29 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4789999999999999988754
No 206
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.69 E-value=0.12 Score=46.18 Aligned_cols=22 Identities=32% Similarity=0.421 Sum_probs=19.0
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|.++|.+|+|||||+..+.++
T Consensus 4 Ki~vvG~~~vGKTSli~~l~~~ 25 (166)
T d1g16a_ 4 KILLIGDSGVGKSCLLVRFVED 25 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3779999999999999988654
No 207
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=87.51 E-value=0.15 Score=46.00 Aligned_cols=24 Identities=29% Similarity=0.342 Sum_probs=21.6
Q ss_pred CeEEEEEEecCCChHHHHHHHHhc
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
-...|+|+|.+|+|||||...+.+
T Consensus 4 ~~~~I~iiG~~nvGKSSLin~L~~ 27 (179)
T d1egaa1 4 YCGFIAIVGRPNVGKSTLLNKLLG 27 (179)
T ss_dssp EEEEEEEECSSSSSHHHHHHHHHT
T ss_pred cccEEEEECCCCCCHHHHHHHHhC
Confidence 456799999999999999999976
No 208
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=87.49 E-value=0.16 Score=45.83 Aligned_cols=25 Identities=24% Similarity=0.274 Sum_probs=21.9
Q ss_pred CeEEEEEEecCCChHHHHHHHHhch
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
....|+|+|.+|+|||||...+...
T Consensus 4 ~~~~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 4 YSGFVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEEEEECSTTSSHHHHHHHHHTS
T ss_pred cCcEEEEECCCCCCHHHHHHHHhCC
Confidence 4568999999999999999998764
No 209
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=87.46 E-value=0.21 Score=43.51 Aligned_cols=25 Identities=28% Similarity=0.240 Sum_probs=22.3
Q ss_pred CeEEEEEEecCCChHHHHHHHHhch
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
+--+|.+.|.=|+||||++|.+++.
T Consensus 32 ~g~ii~L~G~LGaGKTtfvr~~~~~ 56 (158)
T d1htwa_ 32 KAIMVYLNGDLGAGKTTLTRGMLQG 56 (158)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCeEEEEecCCCccHHHHHHHHHhh
Confidence 4568999999999999999999874
No 210
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.40 E-value=0.32 Score=45.39 Aligned_cols=47 Identities=17% Similarity=0.131 Sum_probs=30.2
Q ss_pred CeEEEEEEecCCChHHHHHHHHhchHHHHh----cCCeEEEEEeCCCccHH
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNHEEVKR----KFDKILWVCVSETFEEF 242 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~----~F~~~~wv~vs~~~~~~ 242 (930)
.-.++.|.|.+|+||||+|.+++.+..... .+....++.........
T Consensus 22 ~G~v~~i~G~~GsGKT~l~l~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (242)
T d1n0wa_ 22 TGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPE 72 (242)
T ss_dssp TTSEEEEECCTTSSHHHHHHHHHHHTTSCGGGTCCSSEEEEEESSSCCCHH
T ss_pred CCEEEEEEeCCCCCHHHHHHHHHHHHHHhhccccccceehhhhhhhhhHHH
Confidence 456999999999999999988876422111 12345555555444433
No 211
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.33 E-value=0.13 Score=46.22 Aligned_cols=22 Identities=27% Similarity=0.510 Sum_probs=19.1
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|.|+|.+|+|||||...+.++
T Consensus 7 Ki~lvG~~~vGKTsLi~r~~~~ 28 (171)
T d2erya1 7 RLVVVGGGGVGKSALTIQFIQS 28 (171)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 4888999999999999987653
No 212
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.31 E-value=0.12 Score=46.22 Aligned_cols=21 Identities=29% Similarity=0.510 Sum_probs=18.5
Q ss_pred EEEEecCCChHHHHHHHHhch
Q 002362 200 ISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~~ 220 (930)
|.++|.+|+|||+|.+.+.++
T Consensus 5 i~lvG~~~vGKTsli~r~~~~ 25 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLTK 25 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 578899999999999988764
No 213
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=87.25 E-value=0.14 Score=48.18 Aligned_cols=24 Identities=33% Similarity=0.437 Sum_probs=21.7
Q ss_pred CeEEEEEEecCCChHHHHHHHHhc
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
++.|..|.|+-|.|||||.+++..
T Consensus 2 ~iPv~iitGFLGaGKTTll~~lL~ 25 (222)
T d1nija1 2 PIAVTLLTGFLGAGKTTLLRHILN 25 (222)
T ss_dssp CEEEEEEEESSSSSCHHHHHHHHH
T ss_pred CCCEEEEeeCCCCCHHHHHHHHHh
Confidence 578999999999999999988865
No 214
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.11 E-value=0.13 Score=46.43 Aligned_cols=22 Identities=36% Similarity=0.551 Sum_probs=19.0
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|.|+|.+|+|||||...+.++
T Consensus 4 Ki~~vG~~~vGKSsLi~~~~~~ 25 (175)
T d1ky3a_ 4 KVIILGDSGVGKTSLMHRYVND 25 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHcC
Confidence 3789999999999999987653
No 215
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=87.09 E-value=0.1 Score=47.28 Aligned_cols=20 Identities=20% Similarity=0.454 Sum_probs=18.6
Q ss_pred EEEEecCCChHHHHHHHHhc
Q 002362 200 ISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~ 219 (930)
|+|+|.+|+|||||...+.+
T Consensus 4 VaivG~~nvGKSTLin~L~~ 23 (180)
T d1udxa2 4 VGLVGYPNAGKSSLLAAMTR 23 (180)
T ss_dssp EEEECCGGGCHHHHHHHHCS
T ss_pred EEEECCCCCCHHHHHHHHhC
Confidence 89999999999999999865
No 216
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.04 E-value=0.13 Score=46.19 Aligned_cols=22 Identities=27% Similarity=0.397 Sum_probs=18.9
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|.++|.+|+|||||+..+..+
T Consensus 7 KI~lvG~~~vGKTsll~~~~~~ 28 (174)
T d2bmea1 7 KFLVIGNAGTGKSCLLHQFIEK 28 (174)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3789999999999999987653
No 217
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.87 E-value=0.13 Score=46.38 Aligned_cols=22 Identities=27% Similarity=0.460 Sum_probs=19.2
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|.|+|..|+|||||+..+.++
T Consensus 6 Ki~vvG~~~vGKTsLi~~~~~~ 27 (175)
T d2f9la1 6 KVVLIGDSGVGKSNLLSRFTRN 27 (175)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4789999999999999988664
No 218
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.85 E-value=0.14 Score=45.65 Aligned_cols=21 Identities=29% Similarity=0.656 Sum_probs=18.7
Q ss_pred EEEEecCCChHHHHHHHHhch
Q 002362 200 ISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~~ 220 (930)
|.++|.+|+|||||...+.++
T Consensus 6 i~viG~~~vGKTsli~~l~~~ 26 (166)
T d1ctqa_ 6 LVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 788999999999999988764
No 219
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.78 E-value=0.18 Score=44.99 Aligned_cols=22 Identities=27% Similarity=0.460 Sum_probs=19.0
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.-|.|+|..|+|||||...+.+
T Consensus 5 ~Kv~liG~~~vGKTsLl~~~~~ 26 (167)
T d1xtqa1 5 RKIAILGYRSVGKSSLTIQFVE 26 (167)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 4577899999999999998765
No 220
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.50 E-value=0.14 Score=45.66 Aligned_cols=21 Identities=29% Similarity=0.605 Sum_probs=18.5
Q ss_pred EEEEecCCChHHHHHHHHhch
Q 002362 200 ISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~~ 220 (930)
|.++|.+|+|||+|.+.+.++
T Consensus 6 ivvvG~~~vGKTsli~r~~~~ 26 (167)
T d1c1ya_ 6 LVVLGSGGVGKSALTVQFVQG 26 (167)
T ss_dssp EEEECSTTSSHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHcC
Confidence 678999999999999988654
No 221
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.42 E-value=0.15 Score=45.99 Aligned_cols=22 Identities=32% Similarity=0.487 Sum_probs=18.6
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|.|+|.+|+|||+|...+.++
T Consensus 4 KivvvG~~~vGKTsLi~~~~~~ 25 (177)
T d1kmqa_ 4 KLVIVGDGACGKTCLLIVNSKD 25 (177)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4678899999999999887653
No 222
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=86.40 E-value=0.12 Score=48.86 Aligned_cols=22 Identities=32% Similarity=0.573 Sum_probs=20.0
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.+++|+|+.|.|||||.+.+..
T Consensus 26 ei~~iiG~nGaGKSTLl~~l~G 47 (231)
T d1l7vc_ 26 EILHLVGPNGAGKSTLLARMAG 47 (231)
T ss_dssp CEEECBCCTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCCcHHHHHHHHhC
Confidence 5899999999999999988865
No 223
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=86.32 E-value=0.17 Score=45.90 Aligned_cols=22 Identities=27% Similarity=0.327 Sum_probs=19.6
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|+|+|.+|+|||||...+.+.
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999998763
No 224
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.26 E-value=0.15 Score=46.79 Aligned_cols=22 Identities=27% Similarity=0.434 Sum_probs=19.2
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|.|+|.+|+|||||+..+.++
T Consensus 8 KivvvG~~~vGKTsli~~l~~~ 29 (194)
T d2bcgy1 8 KLLLIGNSGVGKSCLLLRFSDD 29 (194)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHhhC
Confidence 4789999999999999988764
No 225
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.15 E-value=0.16 Score=46.27 Aligned_cols=23 Identities=30% Similarity=0.384 Sum_probs=19.7
Q ss_pred EEEEEEecCCChHHHHHHHHhch
Q 002362 198 HIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
--|.|+|.+|+|||+|.+.+.++
T Consensus 10 ~Ki~lvG~~~vGKTsLi~r~~~~ 32 (185)
T d2atxa1 10 LKCVVVGDGAVGKTCLLMSYAND 32 (185)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHhhC
Confidence 34889999999999999987664
No 226
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=86.06 E-value=0.16 Score=45.68 Aligned_cols=25 Identities=28% Similarity=0.355 Sum_probs=20.9
Q ss_pred CCeEEEEEEecCCChHHHHHHHHhch
Q 002362 195 KGLHIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 195 ~~~~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
..++ |.++|.+|+|||||.+.+.++
T Consensus 11 k~~k-IvlvG~~~vGKTSli~rl~~~ 35 (173)
T d1e0sa_ 11 KEMR-ILMLGLDAAGKTTILYKLKLG 35 (173)
T ss_dssp CCEE-EEEEEETTSSHHHHHHHTTCC
T ss_pred CeEE-EEEECCCCCCHHHHHHHHhcC
Confidence 4566 568999999999999998764
No 227
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.05 E-value=0.16 Score=44.88 Aligned_cols=21 Identities=33% Similarity=0.525 Sum_probs=18.5
Q ss_pred EEEEEecCCChHHHHHHHHhc
Q 002362 199 IISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~ 219 (930)
-|.++|.+|+|||||...+.+
T Consensus 2 KI~liG~~nvGKSSLln~l~~ 22 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKN 22 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 478999999999999988765
No 228
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=85.92 E-value=0.13 Score=46.73 Aligned_cols=21 Identities=24% Similarity=0.539 Sum_probs=19.0
Q ss_pred EEEEEecCCChHHHHHHHHhc
Q 002362 199 IISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~ 219 (930)
-|+|+|.+|+|||||...+.+
T Consensus 3 ~VaiiG~~nvGKSSLin~L~~ 23 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSS 23 (185)
T ss_dssp CEEEESSTTSSHHHHHHHSEE
T ss_pred eEEEECCCCCCHHHHHHHHhC
Confidence 389999999999999998865
No 229
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=85.91 E-value=0.16 Score=45.46 Aligned_cols=21 Identities=14% Similarity=0.419 Sum_probs=18.3
Q ss_pred EEEEecCCChHHHHHHHHhch
Q 002362 200 ISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~~ 220 (930)
|.|+|..|+|||+|...+.++
T Consensus 6 i~vvG~~~vGKTsLi~~~~~~ 26 (170)
T d1ek0a_ 6 LVLLGEAAVGKSSIVLRFVSN 26 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 668999999999999987664
No 230
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=85.90 E-value=0.17 Score=46.35 Aligned_cols=21 Identities=24% Similarity=0.395 Sum_probs=17.9
Q ss_pred EEEEEecCCChHHHHHHHHhc
Q 002362 199 IISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~ 219 (930)
-|.++|-+|+|||+|.+.+..
T Consensus 4 KivllG~~~vGKTsl~~r~~~ 24 (195)
T d1svsa1 4 KLLLLGAGESGKSTIVKQMKI 24 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhh
Confidence 368899999999999987644
No 231
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.86 E-value=0.13 Score=46.01 Aligned_cols=21 Identities=33% Similarity=0.586 Sum_probs=17.4
Q ss_pred EEEEecCCChHHHHHHHHhch
Q 002362 200 ISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~~ 220 (930)
|.++|.+|+|||||...+.++
T Consensus 6 i~vvG~~~vGKTsli~~~~~~ 26 (170)
T d1i2ma_ 6 LVLVGDGGTGKTTFVKRHLTG 26 (170)
T ss_dssp EEEEECTTSSHHHHHHTTC--
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 778899999999999988764
No 232
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.85 E-value=0.18 Score=45.31 Aligned_cols=21 Identities=38% Similarity=0.645 Sum_probs=18.4
Q ss_pred EEEEEecCCChHHHHHHHHhc
Q 002362 199 IISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~ 219 (930)
-|.++|.+|+|||||++.+..
T Consensus 5 Kv~lvG~~~vGKTsLi~~~~~ 25 (172)
T d2g3ya1 5 RVVLIGEQGVGKSTLANIFAG 25 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 478999999999999988754
No 233
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.45 E-value=0.17 Score=46.97 Aligned_cols=23 Identities=22% Similarity=0.239 Sum_probs=19.9
Q ss_pred EEEEEEecCCChHHHHHHHHhch
Q 002362 198 HIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
+-|.|+|.+|+|||||...+.+.
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~~ 23 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLTG 23 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHHcC
Confidence 35899999999999999988663
No 234
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.43 E-value=0.18 Score=46.49 Aligned_cols=19 Identities=32% Similarity=0.518 Sum_probs=17.2
Q ss_pred EEEEEecCCChHHHHHHHH
Q 002362 199 IISIIGMGGMGKTTLAQLA 217 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v 217 (930)
-|.|+|.+|+|||||.+.+
T Consensus 4 KivllG~~~vGKTsll~r~ 22 (200)
T d1zcba2 4 KILLLGAGESGKSTFLKQM 22 (200)
T ss_dssp EEEEECSTTSSHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 3679999999999999987
No 235
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.19 E-value=0.18 Score=45.05 Aligned_cols=22 Identities=27% Similarity=0.369 Sum_probs=19.1
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|.|+|.+|+|||+|+..+.+.
T Consensus 8 Ki~vvG~~~vGKTsli~~~~~~ 29 (170)
T d2g6ba1 8 KVMLVGDSGVGKTCLLVRFKDG 29 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4899999999999999987553
No 236
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=85.18 E-value=0.17 Score=45.78 Aligned_cols=24 Identities=38% Similarity=0.454 Sum_probs=19.8
Q ss_pred CeEEEEEEecCCChHHHHHHHHhch
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
..+ |.++|.+|+|||||.+.+.+.
T Consensus 17 ~~K-I~lvG~~~vGKTsLi~~l~~~ 40 (182)
T d1moza_ 17 ELR-ILILGLDGAGKTTILYRLQIG 40 (182)
T ss_dssp CEE-EEEEEETTSSHHHHHHHTCCS
T ss_pred eEE-EEEECCCCCCHHHHHHHHhcC
Confidence 455 569999999999999988653
No 237
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=85.12 E-value=0.18 Score=44.70 Aligned_cols=21 Identities=24% Similarity=0.506 Sum_probs=17.8
Q ss_pred EEEEecCCChHHHHHHHHhch
Q 002362 200 ISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~~ 220 (930)
|.++|.+|+|||||...+..+
T Consensus 5 i~i~G~~~~GKTsLl~~l~~~ 25 (164)
T d1zd9a1 5 LTLVGLQYSGKTTFVNVIASG 25 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHcC
Confidence 567899999999999887553
No 238
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=85.10 E-value=0.18 Score=46.77 Aligned_cols=22 Identities=36% Similarity=0.389 Sum_probs=19.6
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
.|.|+|.+|+|||||...+.+.
T Consensus 5 ~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 5 SIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 7899999999999999888653
No 239
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.01 E-value=0.24 Score=44.89 Aligned_cols=23 Identities=26% Similarity=0.316 Sum_probs=19.5
Q ss_pred EEEEEEecCCChHHHHHHHHhch
Q 002362 198 HIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
--|.|+|.+|+|||+|...+..+
T Consensus 6 iKivviG~~~vGKTsli~~~~~~ 28 (183)
T d1mh1a_ 6 IKCVVVGDGAVGKTCLLISYTTN 28 (183)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHhC
Confidence 34889999999999999887653
No 240
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=84.93 E-value=0.19 Score=45.65 Aligned_cols=20 Identities=40% Similarity=0.635 Sum_probs=18.2
Q ss_pred EEEEecCCChHHHHHHHHhc
Q 002362 200 ISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~ 219 (930)
|.++|.+|+|||||+..+.+
T Consensus 5 v~vvG~~~vGKSSLi~~l~~ 24 (184)
T d1vg8a_ 5 VIILGDSGVGKTSLMNQYVN 24 (184)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 77999999999999998865
No 241
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.88 E-value=0.19 Score=45.30 Aligned_cols=21 Identities=38% Similarity=0.552 Sum_probs=18.6
Q ss_pred EEEEecCCChHHHHHHHHhch
Q 002362 200 ISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~~ 220 (930)
|.++|.+|+|||||.+.+.++
T Consensus 10 i~vvG~~~vGKTsli~~l~~~ 30 (177)
T d1x3sa1 10 ILIIGESGVGKSSLLLRFTDD 30 (177)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999987653
No 242
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=84.80 E-value=0.22 Score=46.47 Aligned_cols=23 Identities=30% Similarity=0.384 Sum_probs=20.6
Q ss_pred eEEEEEEecCCChHHHHHHHHhc
Q 002362 197 LHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 197 ~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
-+.|+|-|+-|+||||+++.+.+
T Consensus 3 Gk~I~iEG~DGsGKST~~~~L~~ 25 (214)
T d1tmka_ 3 GKLILIEGLDRTGKTTQCNILYK 25 (214)
T ss_dssp CCEEEEEESTTSSHHHHHHHHHH
T ss_pred eEEEEEECCCCCcHHHHHHHHHH
Confidence 46799999999999999998876
No 243
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=84.75 E-value=0.22 Score=47.56 Aligned_cols=22 Identities=27% Similarity=0.392 Sum_probs=19.8
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
++|+|.|..|+||||+|+.+.+
T Consensus 2 ~iIgiTG~igSGKsTva~~l~e 23 (241)
T d1deka_ 2 KLIFLSGVKRSGKDTTADFIMS 23 (241)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHH
Confidence 6899999999999999998754
No 244
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=84.70 E-value=0.21 Score=45.15 Aligned_cols=21 Identities=29% Similarity=0.468 Sum_probs=18.5
Q ss_pred EEEEecCCChHHHHHHHHhch
Q 002362 200 ISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~~ 220 (930)
|.++|..|+|||+|++.+.+.
T Consensus 5 ivliG~~~vGKTsli~r~~~~ 25 (179)
T d1m7ba_ 5 IVVVGDSQCGKTALLHVFAKD 25 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 678999999999999988664
No 245
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=84.46 E-value=0.2 Score=44.68 Aligned_cols=22 Identities=27% Similarity=0.539 Sum_probs=18.8
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|.++|..|+|||||...+.++
T Consensus 6 Ki~lvG~~~vGKTsll~~~~~~ 27 (169)
T d1x1ra1 6 KLVVVGDGGVGKSALTIQFFQK 27 (169)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3567899999999999998764
No 246
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=84.35 E-value=0.22 Score=45.73 Aligned_cols=20 Identities=25% Similarity=0.433 Sum_probs=17.9
Q ss_pred EEEEecCCChHHHHHHHHhc
Q 002362 200 ISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~ 219 (930)
|.++|.+|+|||+|.+.+..
T Consensus 5 iv~lG~~~vGKTsll~r~~~ 24 (200)
T d2bcjq2 5 LLLLGTGESGKSTFIKQMRI 24 (200)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhC
Confidence 67899999999999998754
No 247
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=84.28 E-value=0.24 Score=43.61 Aligned_cols=20 Identities=25% Similarity=0.386 Sum_probs=18.0
Q ss_pred EEEEecCCChHHHHHHHHhc
Q 002362 200 ISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~ 219 (930)
|+|+|.+|+|||||...+..
T Consensus 4 I~lvG~~nvGKSsLin~l~~ 23 (161)
T d2gj8a1 4 VVIAGRPNAGKSSLLNALAG 23 (161)
T ss_dssp EEEEESTTSSHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHhC
Confidence 67999999999999988864
No 248
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=83.95 E-value=0.28 Score=43.65 Aligned_cols=24 Identities=33% Similarity=0.610 Sum_probs=20.1
Q ss_pred eEEEEEEecCCChHHHHHHHHhch
Q 002362 197 LHIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 197 ~~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
+--|.|+|.+|+|||||+..+.++
T Consensus 4 ~~KivlvG~~~vGKTsli~~~~~~ 27 (168)
T d1u8za_ 4 LHKVIMVGSGGVGKSALTLQFMYD 27 (168)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHS
T ss_pred eeEEEEECCCCcCHHHHHHHHHhC
Confidence 445789999999999999987653
No 249
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.84 E-value=0.25 Score=44.34 Aligned_cols=24 Identities=29% Similarity=0.573 Sum_probs=19.8
Q ss_pred eEEEEEEecCCChHHHHHHHHhch
Q 002362 197 LHIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 197 ~~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
+--|.++|.+|+|||||+..+.++
T Consensus 6 ~~KI~vvG~~~vGKSSli~~~~~~ 29 (174)
T d1wmsa_ 6 LFKVILLGDGGVGKSSLMNRYVTN 29 (174)
T ss_dssp EEEEEEECCTTSSHHHHHHHHHHS
T ss_pred eEEEEEECCCCCCHHHHHHHHHhC
Confidence 444889999999999999877653
No 250
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=83.77 E-value=0.21 Score=45.21 Aligned_cols=25 Identities=16% Similarity=0.163 Sum_probs=21.6
Q ss_pred CeEEEEEEecCCChHHHHHHHHhch
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
+...|+|+|.+++|||||...+...
T Consensus 15 ~~~~I~lvG~~NvGKSSL~n~L~~~ 39 (188)
T d1puia_ 15 TGIEVAFAGRSNAGKSSALNTLTNQ 39 (188)
T ss_dssp CSEEEEEEECTTSSHHHHHTTTCCC
T ss_pred cCCEEEEECCCCCCHHHHHHHHhCC
Confidence 4567999999999999999888653
No 251
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=83.67 E-value=0.37 Score=44.75 Aligned_cols=34 Identities=26% Similarity=0.328 Sum_probs=26.1
Q ss_pred hHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhch
Q 002362 178 EKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 178 ~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
.++.+.++|. -++..++|..|+|||||...+..+
T Consensus 85 g~~~L~~~l~---------~kt~~~~G~SGVGKSTLiN~L~~~ 118 (225)
T d1u0la2 85 GIEELKEYLK---------GKISTMAGLSGVGKSSLLNAINPG 118 (225)
T ss_dssp THHHHHHHHS---------SSEEEEECSTTSSHHHHHHHHSTT
T ss_pred hHhhHHHHhc---------CCeEEEECCCCCCHHHHHHhhcch
Confidence 3567777773 146788999999999999988653
No 252
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.62 E-value=0.24 Score=45.22 Aligned_cols=21 Identities=29% Similarity=0.414 Sum_probs=18.0
Q ss_pred EEEEecCCChHHHHHHHHhch
Q 002362 200 ISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~~ 220 (930)
|.++|.+|+|||+|+..+.++
T Consensus 6 vvllG~~~vGKTSli~r~~~~ 26 (191)
T d2ngra_ 6 CVVVGDGAVGKTCLLISYTTN 26 (191)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 678899999999999887653
No 253
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=83.59 E-value=0.48 Score=44.11 Aligned_cols=22 Identities=18% Similarity=0.164 Sum_probs=19.7
Q ss_pred EEEEEEecC-CChHHHHHHHHhc
Q 002362 198 HIISIIGMG-GMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~g-GiGKTtLa~~v~~ 219 (930)
+.+.|.|-| |+||||++-.++.
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~ 24 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQ 24 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHH
T ss_pred ceEEEEECCCCccHHHHHHHHHH
Confidence 568899998 9999999988887
No 254
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.47 E-value=0.24 Score=44.48 Aligned_cols=23 Identities=17% Similarity=0.245 Sum_probs=19.6
Q ss_pred EEEEEEecCCChHHHHHHHHhch
Q 002362 198 HIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
--|.++|.+|+|||||...+.++
T Consensus 6 ~ki~vlG~~~vGKTsLi~~~~~~ 28 (175)
T d2bmja1 6 LRLGVLGDARSGKSSLIHRFLTG 28 (175)
T ss_dssp EEEEEECCTTTTHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHhC
Confidence 45789999999999999988664
No 255
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=83.03 E-value=0.27 Score=44.54 Aligned_cols=24 Identities=29% Similarity=0.523 Sum_probs=20.0
Q ss_pred CeEEEEEEecCCChHHHHHHHHhch
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
.++ |+|+|..|+|||||...+.+.
T Consensus 8 ~~k-V~iiG~~~~GKSTLin~l~~~ 31 (186)
T d1mkya2 8 AIK-VAIVGRPNVGKSTLFNAILNK 31 (186)
T ss_dssp CEE-EEEECSTTSSHHHHHHHHHTS
T ss_pred CCE-EEEECCCCCCHHHHHHHHHCC
Confidence 344 789999999999999888753
No 256
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=82.21 E-value=0.29 Score=45.94 Aligned_cols=22 Identities=27% Similarity=0.472 Sum_probs=18.9
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.-|.++|.+|+|||||.+.+..
T Consensus 7 ~KilllG~~~vGKTsll~~~~~ 28 (221)
T d1azta2 7 HRLLLLGAGESGKSTIVKQMRI 28 (221)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHhc
Confidence 4578999999999999988753
No 257
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.05 E-value=0.2 Score=44.93 Aligned_cols=22 Identities=27% Similarity=0.369 Sum_probs=8.7
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|.|+|-+|+|||||...+..+
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~~ 29 (173)
T d2fu5c1 8 KLLLIGDSGVGKTCVLFRFSED 29 (173)
T ss_dssp EEEEECCCCC------------
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3778999999999999877664
No 258
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=81.33 E-value=0.38 Score=42.75 Aligned_cols=22 Identities=27% Similarity=0.291 Sum_probs=19.1
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.-|.|.|..|+||||+|..+..
T Consensus 16 ~gvli~G~sG~GKS~lal~l~~ 37 (177)
T d1knxa2 16 VGVLLTGRSGIGKSECALDLIN 37 (177)
T ss_dssp EEEEEEESSSSSHHHHHHHHHT
T ss_pred EEEEEEcCCCCCHHHHHHHHHH
Confidence 4578999999999999988765
No 259
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=81.28 E-value=0.34 Score=43.09 Aligned_cols=22 Identities=27% Similarity=0.268 Sum_probs=19.0
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
+-|.|.|.+|+||||+|..+..
T Consensus 15 ~gvl~~G~sG~GKStlal~l~~ 36 (176)
T d1kkma_ 15 LGVLITGDSGVGKSETALELVQ 36 (176)
T ss_dssp EEEEEECCTTSCHHHHHHHHHH
T ss_pred EEEEEEeCCCCCHHHHHHHHHH
Confidence 4588999999999999988754
No 260
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=81.27 E-value=0.39 Score=46.39 Aligned_cols=25 Identities=32% Similarity=0.210 Sum_probs=22.5
Q ss_pred CCeEEEEEEecCCChHHHHHHHHhc
Q 002362 195 KGLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 195 ~~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.++|-|+|+|-+|.|||||+..+..
T Consensus 4 ~~iRni~i~gh~~~GKTtL~e~ll~ 28 (276)
T d2bv3a2 4 KRLRNIGIAAHIDAGKTTTTERILY 28 (276)
T ss_dssp GGEEEEEEEECTTSCHHHHHHHHHH
T ss_pred hhceEEEEEeCCCCCHHHHHHHHHH
Confidence 4788999999999999999988865
No 261
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=80.52 E-value=0.77 Score=43.94 Aligned_cols=40 Identities=28% Similarity=0.361 Sum_probs=28.3
Q ss_pred hhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhch
Q 002362 177 DEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 177 ~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
..+.++...+.... ...-.|.++|..|+|||||...++..
T Consensus 16 ~~l~e~~~~l~~~~----~~~l~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 16 TKLLELLGNLKQED----VNSLTILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp HHHHHHHHHHHHTT----CCEEEEEEEESTTSSHHHHHHHHHTS
T ss_pred HHHHHHHHHHhhcC----CCCcEEEEECCCCCcHHHHHHHHhCC
Confidence 34555566555432 23456779999999999999999864
No 262
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=79.92 E-value=0.42 Score=42.18 Aligned_cols=22 Identities=27% Similarity=0.265 Sum_probs=19.1
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
+-|.|.|..|+||||+|.....
T Consensus 16 ~gvli~G~sg~GKS~la~~l~~ 37 (169)
T d1ko7a2 16 VGVLITGDSGIGKSETALELIK 37 (169)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEEEeCCCCCHHHHHHHHHH
Confidence 4688999999999999987755
No 263
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=78.97 E-value=0.19 Score=44.31 Aligned_cols=20 Identities=35% Similarity=0.507 Sum_probs=18.5
Q ss_pred EEEEecCCChHHHHHHHHhc
Q 002362 200 ISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~ 219 (930)
|+++|.+|+|||||...+..
T Consensus 3 I~liG~~n~GKSSLin~l~g 22 (160)
T d1xzpa2 3 MVIVGKPNVGKSTLLNRLLN 22 (160)
T ss_dssp EEEECCHHHHTCHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhC
Confidence 78999999999999999865
No 264
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=78.95 E-value=4.4 Score=37.62 Aligned_cols=25 Identities=20% Similarity=0.146 Sum_probs=21.8
Q ss_pred CeEEEEEEecCCChHHHHHHHHhch
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
+-+++.|.|+.+.||||+.+.+.-.
T Consensus 40 ~~~~~iiTGpN~~GKSt~lk~i~l~ 64 (234)
T d1wb9a2 40 QRRMLIITGPNMGGKSTYMRQTALI 64 (234)
T ss_dssp SSCEEEEECCTTSSHHHHHHHHHHH
T ss_pred CceEEEEeccCchhhHHHHHHHHHH
Confidence 3478999999999999999998765
No 265
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=78.11 E-value=0.6 Score=44.82 Aligned_cols=22 Identities=32% Similarity=0.623 Sum_probs=19.9
Q ss_pred eEEEEEEecCCChHHHHHHHHh
Q 002362 197 LHIISIIGMGGMGKTTLAQLAC 218 (930)
Q Consensus 197 ~~vi~I~G~gGiGKTtLa~~v~ 218 (930)
+|-|+|+|-.|.|||||+..+.
T Consensus 2 iRNv~iiGh~~~GKTtL~e~ll 23 (267)
T d2dy1a2 2 IRTVALVGHAGSGKTTLTEALL 23 (267)
T ss_dssp EEEEEEEESTTSSHHHHHHHHH
T ss_pred eeEEEEEcCCCCcHHHHHHHHH
Confidence 5789999999999999998774
No 266
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=77.89 E-value=0.81 Score=45.39 Aligned_cols=25 Identities=24% Similarity=0.373 Sum_probs=21.7
Q ss_pred CeEEEEEEecCCChHHHHHHHHhch
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
.+-.|.|=|.-|+||||+++.+.+.
T Consensus 5 ~~~rI~iEG~iGsGKSTl~~~L~~~ 29 (333)
T d1p6xa_ 5 TIVRIYLDGVYGIGKSTTGRVMASA 29 (333)
T ss_dssp EEEEEEEECSTTSSHHHHHHHHHSG
T ss_pred ceEEEEEECCccCCHHHHHHHHHHH
Confidence 4567888899999999999999883
No 267
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=75.00 E-value=0.75 Score=44.78 Aligned_cols=21 Identities=38% Similarity=0.476 Sum_probs=18.6
Q ss_pred EEEEEEecCCChHHHHHHHHh
Q 002362 198 HIISIIGMGGMGKTTLAQLAC 218 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~ 218 (930)
.+..|+|..|+||||+..+++
T Consensus 24 ~ln~IvG~NGsGKStiL~Ai~ 44 (292)
T g1f2t.1 24 GINLIIGQNGSGKSSLLDAIL 44 (292)
T ss_dssp EEEEEECCTTSSHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHH
Confidence 577899999999999998775
No 268
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=74.91 E-value=0.71 Score=45.79 Aligned_cols=21 Identities=29% Similarity=0.324 Sum_probs=19.1
Q ss_pred EEEEEecCCChHHHHHHHHhc
Q 002362 199 IISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~ 219 (930)
-|.|.|..|+||||+.+.+..
T Consensus 168 nili~G~tgSGKTT~l~al~~ 188 (323)
T d1g6oa_ 168 NVIVCGGTGSGKTTYIKSIME 188 (323)
T ss_dssp CEEEEESTTSSHHHHHHHHGG
T ss_pred CEEEEeeccccchHHHHHHhh
Confidence 488999999999999998876
No 269
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=74.03 E-value=0.72 Score=45.60 Aligned_cols=24 Identities=46% Similarity=0.459 Sum_probs=20.9
Q ss_pred CeEEEEEEecCCChHHHHHHHHhc
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.+..|.|=|.-|+||||+++.+.+
T Consensus 3 ~~lrI~IEG~iGsGKTTl~~~La~ 26 (329)
T d1e2ka_ 3 TLLRVYIDGPHGMGKTTTTQLLVA 26 (329)
T ss_dssp EEEEEEECSCTTSSHHHHHHHHTC
T ss_pred CceEEEEECCcCCCHHHHHHHHHH
Confidence 345689999999999999999876
No 270
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=73.93 E-value=1 Score=40.58 Aligned_cols=36 Identities=17% Similarity=0.078 Sum_probs=27.5
Q ss_pred HHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhc
Q 002362 179 KNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 179 ~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
+..+..+|.. .++...+.|+|+++.|||++|..+.+
T Consensus 40 l~~l~~~l~~-----~PKkn~i~~~GP~~TGKS~f~~sl~~ 75 (205)
T d1tuea_ 40 LGALKSFLKG-----TPKKNCLVFCGPANTGKSYFGMSFIH 75 (205)
T ss_dssp HHHHHHHHHT-----CTTCSEEEEESCGGGCHHHHHHHHHH
T ss_pred HHHHHHHHcC-----CCCceEEEEECCCCccHHHHHHHHHH
Confidence 4455555532 34668999999999999999988876
No 271
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.93 E-value=1.5 Score=42.19 Aligned_cols=25 Identities=20% Similarity=0.400 Sum_probs=23.1
Q ss_pred CCeEEEEEEecCCChHHHHHHHHhc
Q 002362 195 KGLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 195 ~~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
+++.||+|+|.-+.|||||...++.
T Consensus 30 ~~v~vvsi~G~~~sGKS~llN~l~~ 54 (277)
T d1f5na2 30 QPMVVVAIVGLYRTGKSYLMNKLAG 54 (277)
T ss_dssp SBEEEEEEEEBTTSSHHHHHHHHTT
T ss_pred CCEEEEEEECCCCCCHHHHHHHHcC
Confidence 4799999999999999999999886
No 272
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=73.74 E-value=1.3 Score=43.43 Aligned_cols=20 Identities=20% Similarity=0.325 Sum_probs=15.0
Q ss_pred EEEEecCCChHHHH-HHHHhc
Q 002362 200 ISIIGMGGMGKTTL-AQLACN 219 (930)
Q Consensus 200 i~I~G~gGiGKTtL-a~~v~~ 219 (930)
+.|.|.+|.||||. +..|..
T Consensus 17 ~lI~g~aGTGKTt~l~~rv~~ 37 (306)
T d1uaaa1 17 CLVLAGAGSGKTRVITNKIAH 37 (306)
T ss_dssp EEECCCTTSCHHHHHHHHHHH
T ss_pred EEEEeeCCccHHHHHHHHHHH
Confidence 67889999999975 444433
No 273
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=73.51 E-value=9.8 Score=34.75 Aligned_cols=105 Identities=17% Similarity=0.185 Sum_probs=56.4
Q ss_pred EEEEEecCCChHHHHHHHHhchHHHHh-------------cCCeEEEEEeCCCccHHHHHHHHHHHhcCCCCCCccHHHH
Q 002362 199 IISIIGMGGMGKTTLAQLACNHEEVKR-------------KFDKILWVCVSETFEEFRVAKAIVEALDGHESRLGEFQSL 265 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~~~~~~-------------~F~~~~wv~vs~~~~~~~~~~~i~~~l~~~~~~~~~~~~~ 265 (930)
++.|.|+...||||+.+.+.--.-..+ .|+ .++......-+.. .+......-
T Consensus 37 ~~iiTGpN~~GKSt~lk~i~l~~ilAq~G~~vpA~~~~i~~~d-~I~~~~~~~d~~~--------------~~~StF~~e 101 (224)
T d1ewqa2 37 LVLITGPNMAGKSTFLRQTALIALLAQVGSFVPAEEAHLPLFD-GIYTRIGASDDLA--------------GGKSTFMVE 101 (224)
T ss_dssp EEEEESCSSSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCS-EEEEECCC--------------------CCSHHHHH
T ss_pred EEEEECCCccccchhhhhhHHHHHHHhccceeecCceEEeecc-eEEEEECCCcccc--------------CCccHHHHh
Confidence 788999999999999998876432221 122 2222222211111 011112212
Q ss_pred HHHHHHHh--cCceEEEEEeCccccCcc------ChhhhhhhhccCCCCcEEEEEcCChHHHhh
Q 002362 266 IKHIYESV--AGMCFLLVLDDVWDGNYM------KWEPFFHCLKNGLHRSKILVTTRKKSVASM 321 (930)
Q Consensus 266 ~~~l~~~l--~~kr~LlVlDdv~~~~~~------~~~~l~~~l~~~~~gs~iivTtr~~~v~~~ 321 (930)
...+...+ .+++.|+++|.+-..... .| .+...|.. .++.+++||...++...
T Consensus 102 l~~~~~il~~~~~~sLvliDE~~~gT~~~eg~ala~-aile~L~~--~~~~~i~tTH~~eL~~l 162 (224)
T d1ewqa2 102 MEEVALILKEATENSLVLLDEVGRGTSSLDGVAIAT-AVAEALHE--RRAYTLFATHYFELTAL 162 (224)
T ss_dssp HHHHHHHHHHCCTTEEEEEESTTTTSCHHHHHHHHH-HHHHHHHH--HTCEEEEECCCHHHHTC
T ss_pred HHHHHHHhccCCCCcEEeecccccCcchhhhcchHH-HHHHHHhh--cCcceEEeeechhhhhh
Confidence 22233333 367899999999653211 11 22233332 46789999998877653
No 274
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=73.27 E-value=0.46 Score=44.27 Aligned_cols=22 Identities=23% Similarity=0.397 Sum_probs=18.3
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
+..++|..|+|||||...+..+
T Consensus 99 ~~vl~G~SGVGKSSLiN~L~~~ 120 (231)
T d1t9ha2 99 TTVFAGQSGVGKSSLLNAISPE 120 (231)
T ss_dssp EEEEEESHHHHHHHHHHHHCC-
T ss_pred eEEEECCCCccHHHHHHhhccH
Confidence 4458899999999999988764
No 275
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=73.10 E-value=12 Score=33.48 Aligned_cols=108 Identities=20% Similarity=0.196 Sum_probs=53.0
Q ss_pred eecchhhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHHHHHHHHHHH
Q 002362 172 ICGRVDEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEFRVAKAIVEA 251 (930)
Q Consensus 172 ~vGr~~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~~~~i~~~ 251 (930)
+-=|+-..+.+..++. .+ + ..|+++.|.|||..|..+.. ++...+.|-+... .+..+..+.
T Consensus 69 ~~Lr~yQ~eav~~~~~-------~~-~-~ll~~~tG~GKT~~a~~~~~------~~~~~~Liv~p~~----~L~~q~~~~ 129 (206)
T d2fz4a1 69 ISLRDYQEKALERWLV-------DK-R-GCIVLPTGSGKTHVAMAAIN------ELSTPTLIVVPTL----ALAEQWKER 129 (206)
T ss_dssp CCCCHHHHHHHHHHTT-------TS-E-EEEEESSSTTHHHHHHHHHH------HSCSCEEEEESSH----HHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHh-------CC-C-cEEEeCCCCCceehHHhHHH------HhcCceeEEEccc----chHHHHHHH
Confidence 3345555555554442 12 2 34678999999998876654 2344444444322 233333333
Q ss_pred hc---CC--------CCC-----CccHHHHHHHHHHHhcCceEEEEEeCccccCccChhhhhhh
Q 002362 252 LD---GH--------ESR-----LGEFQSLIKHIYESVAGMCFLLVLDDVWDGNYMKWEPFFHC 299 (930)
Q Consensus 252 l~---~~--------~~~-----~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~ 299 (930)
+. .. ... ....+.+.... +.+.++--+||+|.+.......|..+...
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~i~i~t~~~~~~~~-~~~~~~~~lvIiDEaH~~~a~~~~~i~~~ 192 (206)
T d2fz4a1 130 LGIFGEEYVGEFSGRIKELKPLTVSTYDSAYVNA-EKLGNRFMLLIFDEVHHLPAESYVQIAQM 192 (206)
T ss_dssp HGGGCGGGEEEESSSCBCCCSEEEEEHHHHHHTH-HHHTTTCSEEEEECSSCCCTTTHHHHHHT
T ss_pred HHhhcccchhhcccccccccccccceehhhhhhh-HhhCCcCCEEEEECCeeCCcHHHHHHHhc
Confidence 32 11 000 11233332222 22333333899999987544455555443
No 276
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=72.00 E-value=0.95 Score=40.44 Aligned_cols=21 Identities=33% Similarity=0.436 Sum_probs=19.1
Q ss_pred EEEEEecCCChHHHHHHHHhc
Q 002362 199 IISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~ 219 (930)
-|+|+|..++|||||...+..
T Consensus 7 nIaiiG~~naGKSTL~n~L~~ 27 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTE 27 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 599999999999999998864
No 277
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=70.19 E-value=0.99 Score=42.19 Aligned_cols=22 Identities=36% Similarity=0.439 Sum_probs=19.5
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.+|+|+|-.+.|||||+..+..
T Consensus 6 p~IaIiGh~d~GKSTL~~~L~~ 27 (227)
T d1g7sa4 6 PIVSVLGHVDHGKTTLLDHIRG 27 (227)
T ss_dssp CEEEEECSTTSSHHHHHHHHHH
T ss_pred CEEEEEeCCCccHHHHHHHHHh
Confidence 4699999999999999988865
No 278
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=68.43 E-value=2.5 Score=41.56 Aligned_cols=16 Identities=31% Similarity=0.472 Sum_probs=13.3
Q ss_pred EEEEecCCChHHHHHH
Q 002362 200 ISIIGMGGMGKTTLAQ 215 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~ 215 (930)
+.|.|.+|.||||.+-
T Consensus 27 ~lV~g~aGSGKTt~l~ 42 (318)
T d1pjra1 27 LLIMAGAGSGKTRVLT 42 (318)
T ss_dssp EEEEECTTSCHHHHHH
T ss_pred EEEEecCCccHHHHHH
Confidence 6788999999997653
No 279
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=68.37 E-value=2 Score=41.03 Aligned_cols=25 Identities=24% Similarity=0.309 Sum_probs=22.1
Q ss_pred CCeEEEEEEecCCChHHHHHHHHhc
Q 002362 195 KGLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 195 ~~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
+....+.++|+|+.|||+++..+.+
T Consensus 102 ~k~n~~~l~G~~~tGKS~f~~~i~~ 126 (267)
T d1u0ja_ 102 GKRNTIWLFGPATTGKTNIAEAIAH 126 (267)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHH
T ss_pred CccEEEEEEcCCCCCHHHHHHHHHH
Confidence 4678899999999999999988866
No 280
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=67.40 E-value=1.1 Score=44.37 Aligned_cols=23 Identities=35% Similarity=0.319 Sum_probs=19.9
Q ss_pred eEEEEEEecCCChHHHHHHHHhc
Q 002362 197 LHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 197 ~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
+-.|.|=|.-|+||||+++.+.+
T Consensus 5 ~lrI~IEG~iGsGKSTl~~~L~~ 27 (331)
T d1osna_ 5 VLRIYLDGAYGIGKTTAAEEFLH 27 (331)
T ss_dssp EEEEEEEESSSSCTTHHHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHH
Confidence 34588889999999999998876
No 281
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=66.35 E-value=1.1 Score=43.27 Aligned_cols=22 Identities=27% Similarity=0.416 Sum_probs=19.4
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|+|||++.+|||||-..+-+.
T Consensus 4 ~~GivG~Pn~GKSTlf~~lt~~ 25 (278)
T d1jala1 4 KCGIVGLPNVGKSTLFNALTKA 25 (278)
T ss_dssp EEEEECCTTSSHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHCC
Confidence 4899999999999999888753
No 282
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=66.28 E-value=2.3 Score=43.48 Aligned_cols=40 Identities=20% Similarity=0.239 Sum_probs=28.9
Q ss_pred ecchh-hHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhc
Q 002362 173 CGRVD-EKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 173 vGr~~-~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.|... ..+.+.+++. ....+|.|.|+.|.||||....+.+
T Consensus 140 LG~~~~~~~~l~~l~~-------~~~GliLvtGpTGSGKSTTl~~~l~ 180 (401)
T d1p9ra_ 140 LGMTAHNHDNFRRLIK-------RPHGIILVTGPTGSGKSTTLYAGLQ 180 (401)
T ss_dssp SCCCHHHHHHHHHHHT-------SSSEEEEEECSTTSCHHHHHHHHHH
T ss_pred hcccHHHHHHHHHHHh-------hhhceEEEEcCCCCCccHHHHHHhh
Confidence 45544 4444544442 3568999999999999999988877
No 283
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=64.32 E-value=1.9 Score=42.66 Aligned_cols=25 Identities=24% Similarity=0.312 Sum_probs=22.2
Q ss_pred CCeEEEEEEecCCChHHHHHHHHhc
Q 002362 195 KGLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 195 ~~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
+.+|-|+|+|-.|.|||||+-.+..
T Consensus 15 ~~IRNI~iiGhvd~GKTTL~d~Ll~ 39 (341)
T d1n0ua2 15 TNVRNMSVIAHVDHGKSTLTDSLVQ 39 (341)
T ss_dssp GGEEEEEEECCGGGTHHHHHHHHHH
T ss_pred ccCcEEEEEeCCCCcHHHHHHHHHH
Confidence 4789999999999999999987753
No 284
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=63.84 E-value=1.7 Score=43.31 Aligned_cols=21 Identities=38% Similarity=0.476 Sum_probs=18.5
Q ss_pred EEEEEEecCCChHHHHHHHHh
Q 002362 198 HIISIIGMGGMGKTTLAQLAC 218 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~ 218 (930)
.+..|+|.-|+||||+..+++
T Consensus 24 ~~~vi~G~NgsGKTtileAI~ 44 (369)
T g1ii8.1 24 GINLIIGQNGSGKSSLLDAIL 44 (369)
T ss_dssp EEEEEECCTTSSHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHH
Confidence 477799999999999998874
No 285
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=62.04 E-value=0.77 Score=41.95 Aligned_cols=21 Identities=24% Similarity=0.366 Sum_probs=17.9
Q ss_pred EEEEEecCCChHHHHHHHHhc
Q 002362 199 IISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~ 219 (930)
+..|+|+.|+||||+..++.-
T Consensus 26 ~tvi~G~NGsGKStil~Ai~~ 46 (222)
T d1qhla_ 26 VTTLSGGNGAGKSTTMAAFVT 46 (222)
T ss_dssp HHHHHSCCSHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHH
Confidence 567889999999999988854
No 286
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=61.53 E-value=1.9 Score=39.39 Aligned_cols=21 Identities=33% Similarity=0.316 Sum_probs=18.4
Q ss_pred EEEEEecCCChHHHHHHHHhc
Q 002362 199 IISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~ 219 (930)
-|+|+|-++.|||||+.++..
T Consensus 5 ni~iiGhvd~GKSTL~~~Ll~ 25 (204)
T d2c78a3 5 NVGTIGHVDHGKTTLTAALTY 25 (204)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 489999999999999988754
No 287
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=61.50 E-value=26 Score=31.91 Aligned_cols=39 Identities=26% Similarity=0.167 Sum_probs=29.2
Q ss_pred chhhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhc
Q 002362 175 RVDEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 175 r~~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.....++|.+.+.. .......+.|..|.|||.++-....
T Consensus 60 Q~~~~~~i~~~~~~------~~~~~~LL~GdvGsGKT~V~~~a~~ 98 (233)
T d2eyqa3 60 QAQAINAVLSDMCQ------PLAMDRLVCGDVGFGKTEVAMRAAF 98 (233)
T ss_dssp HHHHHHHHHHHHHS------SSCCEEEEECCCCTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc------cCccCeEEEcCCCCCcHHHHHHHHH
Confidence 44566677777653 3556788999999999999977765
No 288
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=61.08 E-value=1.9 Score=42.48 Aligned_cols=29 Identities=21% Similarity=0.312 Sum_probs=18.8
Q ss_pred EEEEecCCChHHHHHHHHhchHHHHhcCC
Q 002362 200 ISIIGMGGMGKTTLAQLACNHEEVKRKFD 228 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~~~~~~~~F~ 228 (930)
|+|+|.+.+|||||-..+-+...-...|.
T Consensus 3 v~lvG~pn~GKStlfn~lt~~~~~v~nyp 31 (319)
T d1wxqa1 3 IGVVGKPNVGKSTFFSAATLVDVEIANYP 31 (319)
T ss_dssp EEEEECTTSSHHHHHHHHHC---------
T ss_pred EeEECCCCCCHHHHHHHHHCCCCchhcCC
Confidence 89999999999999999876433233443
No 289
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=60.70 E-value=1.9 Score=41.95 Aligned_cols=22 Identities=27% Similarity=0.443 Sum_probs=19.6
Q ss_pred EEEEEecCCChHHHHHHHHhch
Q 002362 199 IISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
-|+|+|.+.+|||||-..+.+.
T Consensus 12 kiGivG~Pn~GKSTlfnalT~~ 33 (296)
T d1ni3a1 12 KTGIVGMPNVGKSTFFRAITKS 33 (296)
T ss_dssp EEEEEECSSSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
Confidence 3999999999999999888754
No 290
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=60.30 E-value=1.7 Score=43.08 Aligned_cols=21 Identities=24% Similarity=0.496 Sum_probs=18.4
Q ss_pred EEEEEEecCCChHHHHHHHHh
Q 002362 198 HIISIIGMGGMGKTTLAQLAC 218 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~ 218 (930)
.+-.|+|+.|+||||+..++.
T Consensus 27 ~lnvi~G~NGsGKS~il~AI~ 47 (329)
T g1xew.1 27 GFTAIVGANGSGKSNIGDAIL 47 (329)
T ss_dssp SEEEEEECTTSSSHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHH
Confidence 477899999999999988774
No 291
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=59.31 E-value=4.7 Score=38.47 Aligned_cols=24 Identities=29% Similarity=0.326 Sum_probs=20.9
Q ss_pred CeEEEEEEecCCChHHHHHHHHhc
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
..-.|+|+|++.+|||||+..+..
T Consensus 111 ~~~~v~vvG~PNvGKSsliN~L~~ 134 (273)
T d1puja_ 111 RAIRALIIGIPNVGKSTLINRLAK 134 (273)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHT
T ss_pred CceEEEEEecCccchhhhhhhhhc
Confidence 455699999999999999998876
No 292
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=58.59 E-value=14 Score=31.30 Aligned_cols=114 Identities=17% Similarity=0.090 Sum_probs=58.6
Q ss_pred EEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHHHHHHHHHHHhcC------C--CCCCccHH-------H
Q 002362 200 ISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEFRVAKAIVEALDG------H--ESRLGEFQ-------S 264 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~~~~i~~~l~~------~--~~~~~~~~-------~ 264 (930)
|-|+=-.|=||||-|--.+- |..++=-.++.|..-........ ..+++.... . .....+.+ +
T Consensus 5 i~vytG~GKGKTTAAlG~al--RA~G~G~rV~ivQFlKg~~~~ge-~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~a~~ 81 (157)
T d1g5ta_ 5 IIVFTGNGKGKTTAAFGTAA--RAVGHGKNVGVVQFIKGTWPNGE-RNLLEPHGVEFQVMATGFTWETQNREADTAACMA 81 (157)
T ss_dssp EEEEESSSSCHHHHHHHHHH--HHHHTTCCEEEEESSCCSSCCHH-HHHHGGGTCEEEECCTTCCCCGGGHHHHHHHHHH
T ss_pred EEEEeCCCCCcHHHHHHHHH--HHhcCCCEEEEEEEecCCcccch-hhhhcccCcEEEEecCCCcccCCChHHHHHHHHH
Confidence 33343356799999865544 44455455666665432211110 122222211 0 11111111 1
Q ss_pred HHHHHHHHhcCce-EEEEEeCcccc---CccChhhhhhhhccCCCCcEEEEEcCCh
Q 002362 265 LIKHIYESVAGMC-FLLVLDDVWDG---NYMKWEPFFHCLKNGLHRSKILVTTRKK 316 (930)
Q Consensus 265 ~~~~l~~~l~~kr-~LlVlDdv~~~---~~~~~~~l~~~l~~~~~gs~iivTtr~~ 316 (930)
.....++.+.+.. =+||||.+-.. ..-..+.+...+.....+.-+|+|-|+.
T Consensus 82 ~~~~a~~~~~~~~~dllILDEi~~Ai~~gli~~~~v~~ll~~rp~~~evVlTGr~~ 137 (157)
T d1g5ta_ 82 VWQHGKRMLADPLLDMVVLDELTYMVAYDYLPLEEVISALNARPGHQTVIITGRGC 137 (157)
T ss_dssp HHHHHHHHTTCTTCSEEEEETHHHHHHTTSSCHHHHHHHHHTSCTTCEEEEECSSC
T ss_pred HHHHHHHHhhcCccCEEeHHHHHHHHHcCCCCHHHHHHHHHhCCCCCEEEEECCCC
Confidence 2222334444444 49999998431 2234466777777777788999999974
No 293
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=57.47 E-value=2.4 Score=43.31 Aligned_cols=22 Identities=18% Similarity=0.321 Sum_probs=19.4
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
--|+|+|.+|+|||||...+..
T Consensus 57 l~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 57 LNVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp EEEEEEECTTSSHHHHHHHHHT
T ss_pred cEEEEECCCCCCHHHHHHHHhC
Confidence 4589999999999999998864
No 294
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=47.28 E-value=5.2 Score=31.02 Aligned_cols=25 Identities=32% Similarity=0.662 Sum_probs=21.3
Q ss_pred CCeEEEEEEecCCChHHHHHHHHhc
Q 002362 195 KGLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 195 ~~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
...+-+-++|.||+|.+.||+.+.+
T Consensus 6 ~~~~~ihfiGigG~GMs~LA~~L~~ 30 (96)
T d1p3da1 6 RRVQQIHFIGIGGAGMSGIAEILLN 30 (96)
T ss_dssp TTCCEEEEETTTSTTHHHHHHHHHH
T ss_pred hhCCEEEEEEECHHHHHHHHHHHHh
Confidence 3567799999999999999988754
No 295
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=47.20 E-value=9.6 Score=34.06 Aligned_cols=18 Identities=33% Similarity=0.368 Sum_probs=14.8
Q ss_pred EEEEecCCChHHHHHHHH
Q 002362 200 ISIIGMGGMGKTTLAQLA 217 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v 217 (930)
+.|.++.|.|||+.|...
T Consensus 43 ~il~apTGsGKT~~a~l~ 60 (202)
T d2p6ra3 43 LLLAMPTAAGKTLLAEMA 60 (202)
T ss_dssp EEEECSSHHHHHHHHHHH
T ss_pred EEEEcCCCCchhHHHHHH
Confidence 568999999999987543
No 296
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=47.00 E-value=4.3 Score=38.99 Aligned_cols=18 Identities=39% Similarity=0.730 Sum_probs=15.4
Q ss_pred EEEEEEecCCChHHHHHH
Q 002362 198 HIISIIGMGGMGKTTLAQ 215 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~ 215 (930)
.|-.+.|..|.|||||..
T Consensus 15 ~~alfFGLSGTGKTTLs~ 32 (313)
T d2olra1 15 DVAVFFGLSGTGKTTLST 32 (313)
T ss_dssp CEEEEECSTTSSHHHHHC
T ss_pred CEEEEEccCCCCccccee
Confidence 456799999999999983
No 297
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=45.47 E-value=3.5 Score=40.11 Aligned_cols=20 Identities=25% Similarity=0.564 Sum_probs=17.7
Q ss_pred EEEEEEecCCChHHHHHHHH
Q 002362 198 HIISIIGMGGMGKTTLAQLA 217 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v 217 (930)
++-.|+|.-|+||||+..++
T Consensus 25 ~lnvlvG~NgsGKS~iL~Ai 44 (308)
T d1e69a_ 25 RVTAIVGPNGSGKSNIIDAI 44 (308)
T ss_dssp SEEEEECCTTTCSTHHHHHH
T ss_pred CeEEEECCCCCcHHHHHHHH
Confidence 47789999999999998776
No 298
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=45.27 E-value=4.7 Score=38.87 Aligned_cols=18 Identities=39% Similarity=0.730 Sum_probs=15.8
Q ss_pred EEEEEEecCCChHHHHHH
Q 002362 198 HIISIIGMGGMGKTTLAQ 215 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~ 215 (930)
.|-.+.|..|.|||||..
T Consensus 15 ~valffGLSGTGKTTLs~ 32 (318)
T d1j3ba1 15 DVAVFFGLSGTGKTTLST 32 (318)
T ss_dssp CEEEEEECTTSCHHHHTC
T ss_pred CEEEEEccCCCCcccccc
Confidence 467889999999999974
No 299
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=45.06 E-value=5 Score=36.04 Aligned_cols=21 Identities=33% Similarity=0.357 Sum_probs=18.1
Q ss_pred EEEEEecCCChHHHHHHHHhc
Q 002362 199 IISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~ 219 (930)
-|+|+|-.+.|||||+.++..
T Consensus 5 ni~iiGHvd~GKSTL~~~l~~ 25 (196)
T d1d2ea3 5 NVGTIGHVDHGKTTLTAAITK 25 (196)
T ss_dssp EEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 388999999999999987753
No 300
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=44.08 E-value=7.4 Score=35.61 Aligned_cols=25 Identities=24% Similarity=0.117 Sum_probs=20.5
Q ss_pred CCeEEEEEEecCCChHHHHHHHHhc
Q 002362 195 KGLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 195 ~~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
++.--++|+|-...|||||+.++..
T Consensus 7 ~~~~~i~viGHVd~GKSTL~~~Ll~ 31 (222)
T d1zunb3 7 KEMLRFLTCGNVDDGKSTLIGRLLH 31 (222)
T ss_dssp CEEEEEEEECCTTSSHHHHHHHHHH
T ss_pred CCcceEEEEcCCCCCHHHHHHHHHH
Confidence 3455588999999999999988854
No 301
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=43.75 E-value=5.4 Score=32.26 Aligned_cols=23 Identities=9% Similarity=-0.094 Sum_probs=19.9
Q ss_pred eEEEEEEecCCChHHHHHHHHhc
Q 002362 197 LHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 197 ~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
--+|.+.|..|.||+|||..+..
T Consensus 6 gf~i~~tg~~~~gk~~ia~al~~ 28 (122)
T d1g8fa3 6 GFSIVLGNSLTVSREQLSIALLS 28 (122)
T ss_dssp CEEEEECTTCCSCHHHHHHHHHH
T ss_pred ceEEEEeCCCCCCHHHHHHHHHH
Confidence 35788999999999999998865
No 302
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=42.83 E-value=5.5 Score=38.39 Aligned_cols=17 Identities=41% Similarity=0.776 Sum_probs=14.9
Q ss_pred EEEEEEecCCChHHHHH
Q 002362 198 HIISIIGMGGMGKTTLA 214 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa 214 (930)
.+-.+.|..|.|||||.
T Consensus 15 d~alfFGLSGTGKTTLs 31 (323)
T d1ii2a1 15 DVTVFFGLSGTGKTTLS 31 (323)
T ss_dssp CEEEEECCTTSSHHHHH
T ss_pred CEEEEEccCCCCcccce
Confidence 35569999999999998
No 303
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=42.15 E-value=9 Score=39.12 Aligned_cols=22 Identities=23% Similarity=0.318 Sum_probs=18.7
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
+-+.|+|..|+|||++++.+..
T Consensus 51 ~H~~I~G~tGsGKT~~l~~li~ 72 (433)
T d1e9ra_ 51 RHLLVNGATGTGKSVLLRELAY 72 (433)
T ss_dssp GCEEEEECTTSSHHHHHHHHHH
T ss_pred ceEEEEeCCCCcHHHHHHHHHH
Confidence 4589999999999999876655
No 304
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=41.97 E-value=6.2 Score=32.49 Aligned_cols=20 Identities=20% Similarity=-0.051 Sum_probs=15.8
Q ss_pred EEEEEEecCCChHHHHHHHH
Q 002362 198 HIISIIGMGGMGKTTLAQLA 217 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v 217 (930)
+.+.|++..|.|||..|-..
T Consensus 8 ~~~il~~~tGsGKT~~~~~~ 27 (140)
T d1yksa1 8 MTTVLDFHPGAGKTRRFLPQ 27 (140)
T ss_dssp CEEEECCCTTSSTTTTHHHH
T ss_pred CcEEEEcCCCCChhHHHHHH
Confidence 56788899999999777443
No 305
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=40.24 E-value=6.5 Score=35.06 Aligned_cols=20 Identities=35% Similarity=0.434 Sum_probs=17.8
Q ss_pred EEEEEecCCChHHHHHHHHh
Q 002362 199 IISIIGMGGMGKTTLAQLAC 218 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~ 218 (930)
-|+|+|-.+.|||||+..+.
T Consensus 7 nIaiiGhvd~GKSTL~~~L~ 26 (195)
T d1kk1a3 7 NIGMVGHVDHGKTTLTKALT 26 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEEeccCCcHHHHHHHHH
Confidence 57999999999999998884
No 306
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=40.07 E-value=6.8 Score=35.91 Aligned_cols=21 Identities=29% Similarity=0.254 Sum_probs=18.1
Q ss_pred EEEEEecCCChHHHHHHHHhc
Q 002362 199 IISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~ 219 (930)
-|+|+|-.+.|||||+.++..
T Consensus 5 Ni~viGHVd~GKTTL~~~Ll~ 25 (224)
T d1jnya3 5 NLIVIGHVDHGKSTLVGRLLM 25 (224)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEEecCCCCHHHHHHHHHH
Confidence 488999999999999987753
No 307
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=40.06 E-value=12 Score=35.06 Aligned_cols=49 Identities=24% Similarity=0.267 Sum_probs=32.6
Q ss_pred hhhHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhchHHHHhcCCeEE
Q 002362 176 VDEKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACNHEEVKRKFDKIL 231 (930)
Q Consensus 176 ~~~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~ 231 (930)
....++|.+.+..+ ....-.+.|..|+|||-+|-..... .+...+.+.+
T Consensus 89 ~~ai~ei~~d~~~~------~~m~rLL~GdvGSGKT~Va~~a~~~-~~~~g~q~~~ 137 (264)
T d1gm5a3 89 KRAHQEIRNDMISE------KPMNRLLQGDVGSGKTVVAQLAILD-NYEAGFQTAF 137 (264)
T ss_dssp HHHHHHHHHHHHSS------SCCCCEEECCSSSSHHHHHHHHHHH-HHHHTSCEEE
T ss_pred HHHHHHHHHHhhcc------CcceeeeeccccccccHHHHHHHHH-HHhcccceeE
Confidence 45567777777532 3445688999999999998777653 3444444443
No 308
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=39.48 E-value=6.7 Score=39.90 Aligned_cols=21 Identities=33% Similarity=0.548 Sum_probs=18.1
Q ss_pred EEEEEEecCCChHHHHHHHHh
Q 002362 198 HIISIIGMGGMGKTTLAQLAC 218 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~ 218 (930)
.+-.|+|..|+|||++..++.
T Consensus 26 ~l~~i~G~NGsGKS~ileAi~ 46 (427)
T d1w1wa_ 26 NFTSIIGPNGSGKSNMMDAIS 46 (427)
T ss_dssp SEEEEECSTTSSHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHH
Confidence 367799999999999998874
No 309
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=39.00 E-value=67 Score=28.22 Aligned_cols=19 Identities=26% Similarity=0.232 Sum_probs=14.6
Q ss_pred EEEEecCCChHHHHHHHHh
Q 002362 200 ISIIGMGGMGKTTLAQLAC 218 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~ 218 (930)
+.+....|.|||..+....
T Consensus 45 ~iv~a~TGsGKT~~~~l~~ 63 (208)
T d1hv8a1 45 IVAQARTGSGKTASFAIPL 63 (208)
T ss_dssp EEEECCSSSSHHHHHHHHH
T ss_pred eeeechhcccccceeeccc
Confidence 5577899999998775443
No 310
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=36.62 E-value=8 Score=34.78 Aligned_cols=21 Identities=38% Similarity=0.447 Sum_probs=18.7
Q ss_pred EEEEEecCCChHHHHHHHHhc
Q 002362 199 IISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~ 219 (930)
-|+|+|-...|||||+..+..
T Consensus 10 ni~iiGhVd~GKSTL~~~L~~ 30 (205)
T d2qn6a3 10 NIGVVGHVDHGKTTLVQAITG 30 (205)
T ss_dssp EEEEECSTTSSHHHHHHHHHS
T ss_pred EEEEEEccCCcHHHHHHHHHh
Confidence 699999999999999988854
No 311
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=35.83 E-value=14 Score=39.54 Aligned_cols=36 Identities=19% Similarity=0.213 Sum_probs=20.9
Q ss_pred EEEEecCCChHHHHHH-HHhchHHHHhcC--CeEEEEEeC
Q 002362 200 ISIIGMGGMGKTTLAQ-LACNHEEVKRKF--DKILWVCVS 236 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~-~v~~~~~~~~~F--~~~~wv~vs 236 (930)
+.|+|.+|.||||.+- .+.. ......+ +.++.++.+
T Consensus 27 ~lV~A~AGSGKT~~lv~ri~~-ll~~~~~~p~~Il~ltft 65 (623)
T g1qhh.1 27 LLIMAGAGSGKTRVLTHRIAY-LMAEKHVAPWNILAITFT 65 (623)
T ss_dssp EEEEECTTSCHHHHHHHHHHH-HHHTTCCCGGGEEEEESS
T ss_pred EEEEEeCchHHHHHHHHHHHH-HHHcCCCCcccEEEEecc
Confidence 6666999999997763 3432 1112234 346666543
No 312
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=35.21 E-value=21 Score=31.35 Aligned_cols=20 Identities=30% Similarity=0.401 Sum_probs=15.1
Q ss_pred EEEEecCCChHHHHHHHHhc
Q 002362 200 ISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~ 219 (930)
+.|+++.|.|||..|..+..
T Consensus 26 ~lv~~pTGsGKT~i~~~~~~ 45 (200)
T d1wp9a1 26 CLIVLPTGLGKTLIAMMIAE 45 (200)
T ss_dssp EEEECCTTSCHHHHHHHHHH
T ss_pred eEEEeCCCCcHHHHHHHHHH
Confidence 34779999999987665543
No 313
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=33.42 E-value=21 Score=33.92 Aligned_cols=25 Identities=20% Similarity=0.335 Sum_probs=21.5
Q ss_pred CeEEEEEEecCCChHHHHHHHHhch
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
...-|+|+|--+.|||||...+...
T Consensus 25 ~~P~ivvvG~~SsGKSsliNaLlg~ 49 (299)
T d2akab1 25 DLPQIAVVGGQSAGKSSVLENFVGR 49 (299)
T ss_dssp CCCEEEEEEBTTSCHHHHHHHHHTS
T ss_pred CCCeEEEEcCCCCCHHHHHHHHhCC
Confidence 4556889999999999999999764
No 314
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.01 E-value=12 Score=34.58 Aligned_cols=22 Identities=23% Similarity=0.175 Sum_probs=19.0
Q ss_pred EEEEEEecCCChHHHHHHHHhc
Q 002362 198 HIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 198 ~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
--|+|+|-.+.|||||+.++..
T Consensus 7 iNi~iiGHvD~GKsTl~~~ll~ 28 (239)
T d1f60a3 7 INVVVIGHVDSGKSTTTGHLIY 28 (239)
T ss_dssp EEEEEEECTTSCHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHH
Confidence 3689999999999999987754
No 315
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=29.98 E-value=11 Score=28.56 Aligned_cols=20 Identities=30% Similarity=0.680 Sum_probs=17.2
Q ss_pred EEEEecCCChHHHHHHHHhc
Q 002362 200 ISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~~ 219 (930)
|-++|.||+|-+.||+.+.+
T Consensus 4 ihfiGIgG~GMs~LA~~L~~ 23 (89)
T d1j6ua1 4 IHFVGIGGIGMSAVALHEFS 23 (89)
T ss_dssp EEEETTTSHHHHHHHHHHHH
T ss_pred EEEEeECHHHHHHHHHHHHh
Confidence 66789999999999988754
No 316
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=29.89 E-value=11 Score=35.12 Aligned_cols=21 Identities=33% Similarity=0.248 Sum_probs=18.2
Q ss_pred EEEEEecCCChHHHHHHHHhc
Q 002362 199 IISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~ 219 (930)
-|+|.|-.+.|||||+-++..
T Consensus 26 Ni~iiGHVD~GKSTL~~~Ll~ 46 (245)
T d1r5ba3 26 NIVFIGHVDAGKSTLGGNILF 46 (245)
T ss_dssp EEEEEECGGGTHHHHHHHHHH
T ss_pred EEEEEeeCCCCHHHHHHHHHH
Confidence 389999999999999988743
No 317
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=29.69 E-value=23 Score=30.77 Aligned_cols=37 Identities=19% Similarity=0.387 Sum_probs=26.5
Q ss_pred EEEEEecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccH
Q 002362 199 IISIIGMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEE 241 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~ 241 (930)
++.|.|..+.|||..|...+. .+..+.||--++.+|.
T Consensus 1 iiLVtGGarSGKS~~AE~l~~------~~~~~~YiAT~~~~D~ 37 (180)
T d1c9ka_ 1 MILVTGGARSGKSRHAEALIG------DAPQVLYIATSQILDD 37 (180)
T ss_dssp CEEEEECTTSSHHHHHHHHHC------SCSSEEEEECCCC---
T ss_pred CEEEECCCCccHHHHHHHHHh------cCCCcEEEEccCCCCH
Confidence 368999999999999987653 3566777776665553
No 318
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=24.83 E-value=33 Score=31.14 Aligned_cols=19 Identities=21% Similarity=0.331 Sum_probs=15.0
Q ss_pred EEEEecCCChHHHHHHHHh
Q 002362 200 ISIIGMGGMGKTTLAQLAC 218 (930)
Q Consensus 200 i~I~G~gGiGKTtLa~~v~ 218 (930)
+.|+++.|.|||+.+....
T Consensus 61 ~~i~apTGsGKT~~~~~~~ 79 (237)
T d1gkub1 61 FAATAPTGVGKTSFGLAMS 79 (237)
T ss_dssp EECCCCBTSCSHHHHHHHH
T ss_pred EEEEecCCChHHHHHHHHH
Confidence 6688999999998765544
No 319
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=23.39 E-value=13 Score=38.21 Aligned_cols=23 Identities=30% Similarity=0.122 Sum_probs=16.9
Q ss_pred eEEEEEEecCCChHHHH-HHHHhc
Q 002362 197 LHIISIIGMGGMGKTTL-AQLACN 219 (930)
Q Consensus 197 ~~vi~I~G~gGiGKTtL-a~~v~~ 219 (930)
-+++.|.+-+|.|||+. ++.|.+
T Consensus 16 ~g~~lv~A~AGsGKT~~l~~r~~~ 39 (485)
T d1w36b1 16 QGERLIEASAGTGKTFTIAALYLR 39 (485)
T ss_dssp SSCEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCeEEEEcCchHHHHHHHHHHHH
Confidence 34688899999999954 455543
No 320
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=22.21 E-value=22 Score=38.51 Aligned_cols=25 Identities=24% Similarity=0.283 Sum_probs=22.0
Q ss_pred CeEEEEEEecCCChHHHHHHHHhch
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
.-..|.|.|..|.|||+-++.+.+.
T Consensus 85 ~~QsIiisGeSGsGKTe~~k~il~y 109 (684)
T d1lkxa_ 85 ENQCVIISGESGAGKTEASKKIMQF 109 (684)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHH
Confidence 4467999999999999999999874
No 321
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=22.06 E-value=36 Score=33.96 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=26.9
Q ss_pred hHHHHHHHhccCCCCCCCCeEEEEEEecCCChHHHHHHHHhc
Q 002362 178 EKNELLSKLLCESSDSPKGLHIISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 178 ~~~~l~~~L~~~~~~~~~~~~vi~I~G~gGiGKTtLa~~v~~ 219 (930)
.++++++-|.. +.+-..|.|..|.|||-++..++.
T Consensus 19 aI~~l~~~l~~-------g~~~q~l~GltGS~ka~~iA~l~~ 53 (413)
T d1t5la1 19 AIAKLVDGLRR-------GVKHQTLLGATGTGKTFTISNVIA 53 (413)
T ss_dssp HHHHHHHHHHH-------TCSEEEEEECTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHhc-------CCCcEEEeCCCCcHHHHHHHHHHH
Confidence 47788887753 345566889999999999888776
No 322
>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Probab=21.89 E-value=56 Score=27.17 Aligned_cols=33 Identities=18% Similarity=0.410 Sum_probs=22.2
Q ss_pred eEEEEEEecCC-ChHHHHHHHHhchHHHHhcCCeEEEE
Q 002362 197 LHIISIIGMGG-MGKTTLAQLACNHEEVKRKFDKILWV 233 (930)
Q Consensus 197 ~~vi~I~G~gG-iGKTtLa~~v~~~~~~~~~F~~~~wv 233 (930)
++-|+|.|-.| ||++||- |.+ +..+.|..+...
T Consensus 2 pK~I~IlGsTGSIG~~tL~--Vi~--~~~d~f~v~~ls 35 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLD--LIE--RNLDRYQVIALT 35 (150)
T ss_dssp CEEEEEETTTSHHHHHHHH--HHH--HTGGGEEEEEEE
T ss_pred CcEEEEECCCcHHHHHHHH--HHH--cCCCCcEEEEEE
Confidence 47899999988 9999985 222 233456555443
No 323
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=21.60 E-value=40 Score=31.94 Aligned_cols=25 Identities=20% Similarity=0.345 Sum_probs=21.5
Q ss_pred CeEEEEEEecCCChHHHHHHHHhch
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
.+.-|+|+|--+.|||||...+...
T Consensus 23 ~lP~ivVvG~~ssGKSSliNaLlG~ 47 (306)
T d1jwyb_ 23 DLPQIVVVGSQSSGKSSVLENIVGR 47 (306)
T ss_dssp CCCEEEEEECSSSSHHHHHHHHHTS
T ss_pred CCCeEEEEeCCCCCHHHHHHHHhCC
Confidence 4566889999999999999999764
No 324
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=21.44 E-value=23 Score=38.46 Aligned_cols=25 Identities=24% Similarity=0.230 Sum_probs=22.3
Q ss_pred CeEEEEEEecCCChHHHHHHHHhch
Q 002362 196 GLHIISIIGMGGMGKTTLAQLACNH 220 (930)
Q Consensus 196 ~~~vi~I~G~gGiGKTtLa~~v~~~ 220 (930)
.-..|.|.|..|.|||+-++.+.+.
T Consensus 124 ~nQsIiisGeSGaGKTe~~k~il~y 148 (712)
T d1d0xa2 124 QNQSLLITGESGAGKTENTKKVIQY 148 (712)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCceEEEeCCCCCCHHHHHHHHHHH
Confidence 4578999999999999999999874
No 325
>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=20.57 E-value=37 Score=29.27 Aligned_cols=44 Identities=14% Similarity=0.160 Sum_probs=26.5
Q ss_pred EEEE-ecCCChHHHHHHHHhchHHHHhcCCeEEEEEeCCCccHHHHHHHHHHH
Q 002362 200 ISII-GMGGMGKTTLAQLACNHEEVKRKFDKILWVCVSETFEEFRVAKAIVEA 251 (930)
Q Consensus 200 i~I~-G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~~~~i~~~ 251 (930)
|+|+ |.||+| ++||+.+.. ..++.++| ..+......+..++...
T Consensus 3 i~vigGaG~iG-~alA~~la~-----~G~~V~l~--~R~~e~~~~l~~~i~~~ 47 (212)
T d1jaya_ 3 VALLGGTGNLG-KGLALRLAT-----LGHEIVVG--SRREEKAEAKAAEYRRI 47 (212)
T ss_dssp EEEETTTSHHH-HHHHHHHHT-----TTCEEEEE--ESSHHHHHHHHHHHHHH
T ss_pred EEEEeCCcHHH-HHHHHHHHH-----CCCEEEEE--ECCHHHHHHHHHHHHhc
Confidence 6777 789999 567777654 35666766 23333344454544443
No 326
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=20.07 E-value=1.1e+02 Score=24.45 Aligned_cols=105 Identities=12% Similarity=0.051 Sum_probs=55.6
Q ss_pred eCCCccHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHhcCceEEEEEeCccccCccChhhhhhhhccCCCCcEEE-EEc
Q 002362 235 VSETFEEFRVAKAIVEALDGHESRLGEFQSLIKHIYESVAGMCFLLVLDDVWDGNYMKWEPFFHCLKNGLHRSKIL-VTT 313 (930)
Q Consensus 235 vs~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~ii-vTt 313 (930)
|.++......+..+++..+-......+.++....+.+ .+.=++++|-. -.+ ..--.+...+....+...|| +|.
T Consensus 6 VDDd~~~~~~l~~~L~~~g~~v~~a~~~~eAl~~l~~---~~~dlvilD~~-mp~-~~G~e~~~~lr~~~~~~piI~lT~ 80 (137)
T d1ny5a1 6 IEDDKVFRGLLEEYLSMKGIKVESAERGKEAYKLLSE---KHFNVVLLDLL-LPD-VNGLEILKWIKERSPETEVIVITG 80 (137)
T ss_dssp ECCCHHHHHHHHHHHHHHTCEEEEESSHHHHHHHHHH---SCCSEEEEESB-CSS-SBHHHHHHHHHHHCTTSEEEEEEE
T ss_pred EecCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHhhc---cccccchHHHh-hhh-hhHHHHHHHHHHhCCCCCEEEEEC
Confidence 4566677777888887765543334455555555543 34457888733 222 22233444454434455555 555
Q ss_pred CCh--HHHhhhC-CcceEeCCCCChHHHHHHHHH
Q 002362 314 RKK--SVASMMG-STNIISIKELTEEECRLLFNK 344 (930)
Q Consensus 314 r~~--~v~~~~~-~~~~~~l~~L~~~~~~~lf~~ 344 (930)
... .....+. ...-|-.+|++.++-...+.+
T Consensus 81 ~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~ 114 (137)
T d1ny5a1 81 HGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINK 114 (137)
T ss_dssp TTCHHHHHHHHTTTCCEEEEESCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHH
Confidence 542 1222222 134566778888776555544
No 327
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=20.02 E-value=17 Score=27.54 Aligned_cols=20 Identities=25% Similarity=0.380 Sum_probs=15.0
Q ss_pred EEEEEecCCChHHHHHHHHhc
Q 002362 199 IISIIGMGGMGKTTLAQLACN 219 (930)
Q Consensus 199 vi~I~G~gGiGKTtLa~~v~~ 219 (930)
-|.|+|+|++|.++ |+.+.+
T Consensus 7 ~v~ViGlG~sG~s~-a~~L~~ 26 (93)
T d2jfga1 7 NVVIIGLGLTGLSC-VDFFLA 26 (93)
T ss_dssp CEEEECCSHHHHHH-HHHHHH
T ss_pred EEEEEeECHHHHHH-HHHHHH
Confidence 47899999999875 665543
Done!