Query 002366
Match_columns 930
No_of_seqs 231 out of 1182
Neff 8.1
Searched_HMMs 46136
Date Thu Mar 28 22:25:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002366.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002366hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1959 Glycosyl hydrolase, fa 100.0 4E-204 8E-209 1699.1 69.7 879 26-930 90-993 (996)
2 PLN02701 alpha-mannosidase 100.0 1E-161 3E-166 1476.4 84.3 851 26-930 85-1049(1050)
3 KOG1958 Glycosyl hydrolase, fa 100.0 1E-141 3E-146 1195.4 52.1 836 26-930 208-1128(1129)
4 PRK09819 alpha-mannosidase; Pr 100.0 1.4E-97 3E-102 920.1 69.9 788 8-929 25-875 (875)
5 KOG4342 Alpha-mannosidase [Car 100.0 1.5E-77 3.2E-82 651.1 38.0 704 26-930 324-1078(1078)
6 COG0383 AMS1 Alpha-mannosidase 100.0 1.3E-51 2.7E-56 502.1 32.4 683 12-930 219-943 (943)
7 PF07748 Glyco_hydro_38C: Glyc 100.0 2.9E-44 6.3E-49 420.7 37.3 425 415-927 1-457 (457)
8 PF01074 Glyco_hydro_38: Glyco 100.0 2.2E-44 4.7E-49 392.0 17.9 218 27-278 45-275 (275)
9 PF09261 Alpha-mann_mid: Alpha 99.8 4.7E-22 1E-26 173.0 1.6 75 283-357 1-80 (80)
10 smart00872 Alpha-mann_mid Alph 99.8 3.4E-20 7.3E-25 160.9 5.4 74 284-357 1-79 (79)
11 COG0383 AMS1 Alpha-mannosidase 99.2 3.4E-12 7.4E-17 157.4 0.5 282 45-359 75-389 (943)
12 PF03065 Glyco_hydro_57: Glyco 96.9 0.0011 2.3E-08 75.4 5.1 79 44-124 118-197 (360)
13 TIGR03212 uraD_N-term-dom puta 89.7 6.9 0.00015 43.1 14.3 85 35-124 98-187 (297)
14 PF01522 Polysacc_deac_1: Poly 87.2 0.66 1.4E-05 43.4 3.8 70 44-117 52-122 (123)
15 COG1543 Uncharacterized conser 86.5 1 2.2E-05 51.1 5.3 85 35-121 115-207 (504)
16 TIGR02764 spore_ybaN_pdaB poly 73.0 11 0.00023 38.5 7.2 70 45-118 54-124 (191)
17 TIGR02884 spore_pdaA delta-lac 72.5 9.7 0.00021 40.1 6.9 71 45-118 85-156 (224)
18 PF07481 DUF1521: Domain of Un 66.1 46 0.001 32.5 9.1 69 523-597 7-76 (171)
19 TIGR02873 spore_ylxY probable 64.8 19 0.0004 39.1 7.2 69 45-117 133-202 (268)
20 PRK15394 4-deoxy-4-formamido-L 59.4 2.6E+02 0.0057 30.8 14.9 86 36-124 84-176 (296)
21 TIGR03006 pepcterm_polyde poly 55.0 23 0.00049 38.4 5.8 83 36-121 50-139 (265)
22 PRK14582 pgaB outer membrane N 31.4 6.3E+02 0.014 31.3 13.4 146 45-244 173-347 (671)
23 PRK14581 hmsF outer membrane N 28.7 1.1E+02 0.0025 37.5 6.5 77 45-124 173-277 (672)
24 PRK10148 hypothetical protein; 28.3 19 0.00042 35.1 0.0 17 90-106 123-139 (147)
25 PF08672 APC2: Anaphase promot 25.4 28 0.00062 28.4 0.5 15 44-58 44-58 (60)
26 TIGR03593 yidC_nterm membrane 24.0 6.2E+02 0.014 28.6 11.3 28 524-551 74-101 (366)
27 COG1449 Alpha-amylase/alpha-ma 23.0 1.1E+02 0.0024 37.4 5.0 70 44-117 187-262 (615)
28 PRK12465 xylose isomerase; Pro 21.6 1.4E+02 0.0029 34.2 4.9 64 189-257 86-154 (445)
No 1
>KOG1959 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.8e-204 Score=1699.11 Aligned_cols=879 Identities=47% Similarity=0.791 Sum_probs=794.5
Q ss_pred ceeehhhHHHHhhhcCCcc-------cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcC--CCCcceeec
Q 002366 26 GIQIENLCLLKWHFSIDGG-------LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFN--KTPKAGWQI 96 (930)
Q Consensus 26 ~~~~e~~~~~~w~~~~~~~-------LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG--~~p~vgW~i 96 (930)
=|+||++||.+||+++.++ ||++||||||||||||||||++||.|+|+||+.||+||.++|| .+|++||||
T Consensus 90 FI~VE~aFF~rWW~~qS~~~k~~Vk~LV~~GrLEFi~Ggw~MnDEA~~hY~dvIDQ~TlGlrfL~~tFG~cgrPrvgWqI 169 (996)
T KOG1959|consen 90 FIYVETAFFARWWNEQSETQKEQVKKLVNEGRLEFIGGGWSMNDEATTHYQDVIDQFTLGLRFLKDTFGECGRPRVGWQI 169 (996)
T ss_pred eehhhHHHHHHHHHhcCHHHHHHHHHHHhcCCEEEecCeeeecchhhhhHHHHHHHHHHHHHHHHHHhcccCCcceeeee
Confidence 5999999999999999884 8999999999999999999999999999999999999999999 799999999
Q ss_pred CCCCCchHHHHHHHHhcCCcEEEEeccChHhHHhhhcCCCeEEEEEcCCCCCCCcceEEeecCcCCCCCCCCCccccCCC
Q 002366 97 DPFGHSAVQAYLLGVELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTDDF 176 (930)
Q Consensus 97 D~FGhs~~~P~il~~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th~~~~~Y~~p~~f~f~~~~~~ 176 (930)
||||||+.||+||+ +|||++.+|+||||+||+.|..++.|||+|+|++++++.++|||++|++|||+|++||||..|.|
T Consensus 170 DPFGHSreqAslfA-qmGfd~~fFaRiDy~dK~~R~~~~~lE~iW~~S~sL~~~~~iFTg~l~n~Y~~P~gfc~dv~c~d 248 (996)
T KOG1959|consen 170 DPFGHSREQASLFA-QMGFDGVFFARIDYQDKAKRMKEKTLEMIWRGSESLGSSSQIFTGALYNHYSPPPGFCFDVLCGD 248 (996)
T ss_pred CCCCcchHHHHHHH-HhCccchheeecchhhHHHHHhhccceEEeecCccccchhhhhhhccccCCCCCCCceeccccCC
Confidence 99999999999995 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCeeEEEecCCCCCCchhHHHHHHHHHHHHHhc---CC-CeEEEeCC
Q 002366 177 DPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNK---GG-RVNALYST 252 (930)
Q Consensus 177 ~p~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~iL~~~G~Df~y~~a~~~~~~~~~li~~iN~---~~-~~~i~~sT 252 (930)
.|++|++.+.+|||++|++.|++.++.++.+|+|||||+|||+||+|.+|..||+||||||+|+|+ .+ ++++.|||
T Consensus 249 ~Pi~D~~~~~d~NVkerVd~Fv~~a~~~a~~~RtnHim~~MG~DFqY~~A~v~fknmDkLI~yVN~~qa~gs~vnv~YST 328 (996)
T KOG1959|consen 249 DPIIDGPRSYDYNVKERVDDFVAYAKNQAAYYRTNHIMWPMGDDFQYENANVWFKNMDKLIKYVNERQADGSKVNVFYST 328 (996)
T ss_pred CCCCCCCCCCCccHHHHHHHHHHHHHHhHhheecceEEEeccCCceehhhhHHHhhHHHHHHHhhhhhcCCceEEEEEcC
Confidence 999999999999999999999999999999999999999999999999999999999999999993 34 79999999
Q ss_pred hhhHHHHHHhcCCCCCCccCCcccccccCCCceeeeeecchhhHHHHHHHhHHHHHHHHHHHhhcCCC--CCCCchHHHH
Q 002366 253 PSLYTEAKNAANGPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGKKS--PGPTTSALGD 330 (930)
Q Consensus 253 ~~~Yf~a~~~~~~~~p~~~gDffpy~~~~~~ywtG~yTSr~~~K~~~R~~e~~L~~ae~l~~l~~~~~--~~~~~~~l~~ 330 (930)
|+||++++|+.+..||+++.||||||+++|+||||||||||.+|++.|++++.|++|++|.++|++.. ..+.++.|++
T Consensus 329 pscYl~alh~~~~Twp~Kt~DFFPYa~~~~syWTGyFTSRPa~Kr~~R~~s~~lq~akQL~~la~l~~~~~~~dl~~Lre 408 (996)
T KOG1959|consen 329 PSCYLNALHAANQTWPVKTDDFFPYASEPHSYWTGYFTSRPALKRFERDGSHYLQVAKQLSVLAGLSSTEQGPDLDYLRE 408 (996)
T ss_pred hHHHHHHHHHhcCcccccccccCcCCCCCCcceeeeccccHHHHHHHhhhhHHHHHHHHHhhhcCCCccccCccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998765 4578899999
Q ss_pred HHhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCCCCCCCccccCCcccccCCCCCCCCC
Q 002366 331 ALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPASTFSQCPLLNISYCPPTEKGIP 410 (930)
Q Consensus 331 ~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~ln~s~~~~~~~~~~ 410 (930)
+|++.|||||||||+|++|.+||+++|..|+-.|+.+++++|+.|.... ...|++|++||||+||.++.
T Consensus 409 am~i~QHHDAVTGTekq~Va~DY~r~La~g~~~~e~~~~~aL~~lt~~~--------~~~f~~C~~lNiS~C~~t~~--- 477 (996)
T KOG1959|consen 409 AMAIMQHHDAVTGTEKQHVADDYARRLADGILGAEKLARDALRKLTNLP--------NGEFQSCLLLNISECAFTKD--- 477 (996)
T ss_pred HHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC--------CccchhhhhhccccCCCCcC---
Confidence 9999999999999999999999999999999999999999999998643 34789999999999999863
Q ss_pred CCCcEEEEEEcCCCceeeEEEEEEEcCCcEEEEcCCCCeeeEEEEeccccccccccchhhhccCCCCCCCCcEEEEEEEe
Q 002366 411 EGKNLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQSSKRVPRYWLLFQVT 490 (930)
Q Consensus 411 ~~~~~~vvvfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~ 490 (930)
.++.+.|+|||||+|.++++|+|||+.+++.|+|+.|++|++|++|+......+. .......++|+|.|.
T Consensus 478 ~~~~~~v~~YNpLa~~~t~~VRiPV~~~~~~V~D~~G~~v~Sqivp~~~~~~al~----------~~~~~~~~eLvf~as 547 (996)
T KOG1959|consen 478 GADNFIVTLYNPLAHTVTQYVRIPVKEENYRVTDEKGRTVPSQIVPVPWQVLALE----------SRNNDTKHELVFKAS 547 (996)
T ss_pred CcCcEEEEEEcCCcceeeeEEEEeccCCCeEEECCCCCCcccceeccchhhhhhh----------ccccCCCceEEEEEE
Confidence 3678999999999999999999999999999999999999999999875433321 112345689999999
Q ss_pred eCCCceEEEEEEecCCccccccccccccCCCCCCceEecCCeEEEEEECCCCceEEEEecCCCeeeeEEEEEEEeeccC-
Q 002366 491 VPPLGWNTYFISRAAGKVKRRKGFFLAADSPQDKTVEVGPGNLKMSFSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMV- 569 (930)
Q Consensus 491 vP~lG~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~l~si~~k~~g~~~~~~~~~~~Y~~~~- 569 (930)
|||+|+++|.|+..........+.............+|+|+++++.||.++|.+++|....+|.+.++.|+|.+|..+.
T Consensus 548 vpplg~aty~i~k~~~~~~~~~~~~~~i~~~~~n~~~V~n~~~kl~fd~~tG~l~~v~~n~t~~t~~V~Q~f~~Y~~~~g 627 (996)
T KOG1959|consen 548 VPPLGIATYFIKKVASTERGSASHVRNIKKRESNATEVGNSHLKLVFDNDTGLLKTVEMNQTGVTENVDQEFGYYKGYRG 627 (996)
T ss_pred ecCccceEEEEeecCcccccccccccccccccCcceEeccceEEEEEcCCCCceEEEEecccCcceeeeeeeEEEEeecC
Confidence 9999999999997655433211222222222334489999999999998899999999888999999999999999873
Q ss_pred --CCCCCCceeEcCCCCCCcccC-CCccEEEEeccceEEEEEEEcceEEEEEEEeecCCceEEEEEECCccccCCCCcEE
Q 002366 570 --DTQSSGAYIFRPNGAQPNVVS-RSVPIKIIRGPMVDEVHQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEV 646 (930)
Q Consensus 570 --~~~~sgaYiF~P~~~~~~~~~-~~~~i~v~~G~l~~~v~~~~~~~i~q~irL~~~~~~ie~e~~v~~i~~~d~~~~e~ 646 (930)
+.+.||||+|+| +..++++. ...+++|+.|||+.||++.++.||+|++|+|++.+++||||.|+|||++|..|||+
T Consensus 628 ~n~~q~SgAYiFRp-~~~~~~~~~~~vel~vv~G~LV~EVhQ~f~~wiSQviRvy~g~~~~E~Ew~VGpIp~~d~~gkEv 706 (996)
T KOG1959|consen 628 DNDKQASGAYIFRP-GQADIPIVSDQVELTVVDGPLVKEVHQQFNPWISQVIRVYEGKNHVEFEWLVGPIPIDDGIGKEV 706 (996)
T ss_pred CcCCccCcceEecC-CCCCccccccceEEEEecCchHHHHHHHHHHHHhheeEecCCCcceEEEEEecceecCCCccceE
Confidence 347799999999 44334443 35788999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeeccCCCeEEEccCCcceeeccccccCCcCCCccccccceEEeccceEEEEeCCcceEEEeccccccccccCceE
Q 002366 647 ISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQV 726 (930)
Q Consensus 647 ~~rf~t~i~s~~~fyTDsng~~~i~R~~~~~~~w~~~~~~pv~~nyYP~~s~~~I~D~~~~ltvl~dr~~G~ss~~~G~i 726 (930)
+.||.|+|++++.|||||||++||||.+++|++|.....+|++||||||++.|+|+|++.+|+|||||+|||+|++||+|
T Consensus 707 Vtr~~t~i~S~g~fYTDSNGRe~~kR~~d~r~~~~~~~~epiAGNYYPvt~~i~lqD~~~rl~vL~DRAqGgsSl~dG~l 786 (996)
T KOG1959|consen 707 VTRFSTEISSNGVFYTDSNGREMIKRVRDKREDFVLDVNEPIAGNYYPVTSRIYLQDSKKRLSVLNDRAQGGSSLKDGQL 786 (996)
T ss_pred EEEeccccccCceEEecCcHHHHHHHHhcccCCCccccCccccccccccceeeEEecCCceEEEEeecccCCccccCCeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeeccCCCCCCcccccccccccccCCCCeeEeeeEEEeecccCccc-cccccchhhhcccceeeeecccccccccc
Q 002366 727 EIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQLGAGA-RWRRTTGQEVYSPLLLAFTQEKLETWTES 805 (930)
Q Consensus 727 elmL~Rr~~~dD~rGv~e~l~e~~~~~~~~~gl~~~~~~~l~~~~~~~~~-~~~~~~~~~l~~p~~~~~~~~~~~~~~~~ 805 (930)
|||||||++.||++||||+|||+.++ ..||+++|+|++.++.....+ .++|..+.++..|.+.+|++.....+...
T Consensus 787 ElMLHRRl~~DD~~Gv~EaLnEt~~~---~~gL~~rGk~~~~l~~~~d~a~~~~r~~~~ei~~P~~~~f~~~~~~~~~~~ 863 (996)
T KOG1959|consen 787 ELMLHRRLLNDDGRGVGEALNETVYG---HAGLIARGKLYVLLDKAGDGATGWRRLAEQEIHLPLWKFFSKPEGGEALNS 863 (996)
T ss_pred EEEeeehhhcccccccchhccccccc---ccceEEeeeEEEEEecccccchhhhhhhhhhcccHHHHHhhcCCCccchhh
Confidence 99999999999999999999999886 279999999999999887765 67788999999999999987765444333
Q ss_pred ccCccccCccCCCCCCcceEEEeeecCCCcEEEEEeeccccCCCCCcceeeeeehhhhcccCccceeeecccccccchhh
Q 002366 806 HLTKSTAMESDYSLPLNVALITLEELDDGSVLLRLAHLYEEGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLE 885 (930)
Q Consensus 806 ~~~~~s~l~~~~~lp~nv~lltlk~~~~~~~llRl~~~~~~~~~~~~s~~~~v~l~~lf~~~~i~~v~E~sLt~~~~~~~ 885 (930)
...+.+.+..+..||.+|||+||++++++.+||||+|+|+++||+++|++++++|.+||..+++..++||+|+||+++++
T Consensus 864 ~s~~~~~f~~~~~lP~~vhLlTLe~~~~~~vLlRleh~~e~gED~~~s~vvsfnl~~lf~~~~i~~i~EttL~gN~~ls~ 943 (996)
T KOG1959|consen 864 LSIPGSAFSGSYDLPQSVHLLTLEEWSKDEVLLRLEHLYEVGEDSELSQVVSFNLRKLFSALDIVEIRETTLDGNQPLSD 943 (996)
T ss_pred cCCCccccccccCCCcceeeeecccCCCCceEeeehhhhhcccccccCcceEEEhHHhhcccCeeEEEEeeccCccChhh
Confidence 33333334445689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceeeec-CCCC---CcCCCCCCCCCCC-CCceEEecCcceeEEEEEC
Q 002366 886 MKKMTWKVE-GESG---KTHSPVRGGPLDA-STLVVELGPMEIRTFLLKF 930 (930)
Q Consensus 886 ~~r~~w~~~-~~~~---~~~~~~~~~~~~~-~~~~v~l~P~eIrTf~i~~ 930 (930)
|+|++|..+ ++.. ...++.+..|+++ +.+.|+|.|||||||+|++
T Consensus 944 mkr~k~~~~~~G~~~~~~~~~~s~~~p~~~~~~~~vtL~PmeIRTfii~~ 993 (996)
T KOG1959|consen 944 MKRFKFHWDVSGEKPSGVEYSTSRHKPLDKTSEFIVTLHPMEIRTFIIKF 993 (996)
T ss_pred hhhhccccCCCCCCCCCccccccCCCCCCcccceEEEEeccEEEEEEEEE
Confidence 999888776 3321 1333445556654 6789999999999999974
No 2
>PLN02701 alpha-mannosidase
Probab=100.00 E-value=1.3e-161 Score=1476.44 Aligned_cols=851 Identities=27% Similarity=0.453 Sum_probs=698.8
Q ss_pred ceeehhhHHHHhhhcCCcc-------cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCC
Q 002366 26 GIQIENLCLLKWHFSIDGG-------LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDP 98 (930)
Q Consensus 26 ~~~~e~~~~~~w~~~~~~~-------LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~ 98 (930)
=|++|++||++||+++.|+ ||++||||||||||||+|||++|||||||||++||+||+++||+.|++||+|||
T Consensus 85 Fi~~E~~fl~~Ww~~~~pe~~~~vk~LV~~GrLE~vgGgwvm~DEa~~~~esiI~Ql~~G~~~l~~~fG~~P~~~W~iDp 164 (1050)
T PLN02701 85 FIWEEMSYLERWWRDASPSKKEAFTKLVKNGQLEIVGGGWVMNDEANSHYFAIIEQITEGNMWLNDTIGVAPKNSWAIDP 164 (1050)
T ss_pred eeeccHHHHHHHHHhcCHHHHHHHHHHHHcCCEEEECCceecccccccCHHHHHHHHHhhhHHHHhhcCCCCCcCccCCC
Confidence 3678999999999999995 799999999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHhcCCcEEEEeccChHhHHhhhcCCCeEEEEEcCCCCCCCcceEEeecCc-CC------CCCCCCC--
Q 002366 99 FGHSAVQAYLLGVELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPV-HY------SPPSGFH-- 169 (930)
Q Consensus 99 FGhs~~~P~il~~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th~~~~-~Y------~~p~~f~-- 169 (930)
||||++|||||+ +|||++++|+|++|++|..|..++.+||+|+++++.++|++||||+||+ +| ++|++||
T Consensus 165 FGhs~~~P~Ll~-~~G~~~~~~~R~~y~~k~~~~~~~~~eF~W~~s~~~~dgs~Ift~~lp~y~Y~~p~~~~p~p~~c~~ 243 (1050)
T PLN02701 165 FGYSSTMAYLLR-RMGFENMLIQRTHYEVKKELAQNKNLEYIWRQSWDAEETTDIFVHMMPFYSYDIPHTCGPEPAICCQ 243 (1050)
T ss_pred CCCCHHHHHHHH-hCCCceEEEeccchHHHHHHhhcCCceEEEeCCCCCCCCCEEEEEEccccccCcccccCCCcccccc
Confidence 999999999998 9999999999999999999999999999999987766799999999994 34 3456666
Q ss_pred ccccC------CCCCccCCC-CCCCCcHHHHHHHHHHHHHHhhcccCCCeeEEEecCCCCC---CchhHHHHHHHHHHHH
Q 002366 170 FELTD------DFDPVQDNP-LLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQY---QYAESWFKQMDKLIHY 239 (930)
Q Consensus 170 f~~~~------~~~p~~~~~-~~~~~nv~~~~~~~~~~~~~~~~~~~t~~iL~~~G~Df~y---~~a~~~~~~~~~li~~ 239 (930)
||..+ ..|||.++| .++++|+++++++|++++++++..|+++++|+|+|+||+| .+|..+|+||++||++
T Consensus 244 Fd~~~~~~~~~~~cp~~~~p~~~~~~nv~~r~~~~~~~~~~~s~~~rtn~iL~p~GdDf~~~~~~~a~~~f~n~dkli~~ 323 (1050)
T PLN02701 244 FDFARMRGFQYELCPWGKHPVETNDENVQERAMKLLDQYRKKSTLYRTNTLLVPLGDDFRYISIDEAEAQFRNYQKLFDY 323 (1050)
T ss_pred cccccccccccccCcccCCccccchhHHHHHHHHHHHHHHHhhccccCCeEEEecCCCCCCcchhHHHHHHHhHHHHHHH
Confidence 55542 248888765 6889999999999999999999999999999999999999 5788999999999999
Q ss_pred HhcCC--CeEEEeCChhhHHHHHHhcC----------------CCCCCccCCcccccccCCCceeeeeecchhhHHHHHH
Q 002366 240 VNKGG--RVNALYSTPSLYTEAKNAAN----------------GPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRV 301 (930)
Q Consensus 240 iN~~~--~~~i~~sT~~~Yf~a~~~~~----------------~~~p~~~gDffpy~~~~~~ywtG~yTSr~~~K~~~R~ 301 (930)
+|+++ .++++||||++||+++++.. ..||+++||||||+++.++||||||||||.+|+++|+
T Consensus 324 iN~~~~~~~~i~~ST~~~Yf~~l~~~~~~~~~~~~ge~~~~~~~~~p~~~gDff~Ya~~~~~yWTGyyTSRp~lK~~~R~ 403 (1050)
T PLN02701 324 INSNPSLKAEVKFGTLEDYFSTLRDEADRINYSRPGEVGSGEVPGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRV 403 (1050)
T ss_pred HhhCcccCceEEECCHHHHHHHHHhhhccccccccccccccccCCCceecccccccccccccccceeeecHHHHHHHHHH
Confidence 99764 48999999999999998753 5799999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHhhcCC-----CC------CCCchHHHHHHhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHH
Q 002366 302 LSGFYLASRQLEFLAGKK-----SP------GPTTSALGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSS 370 (930)
Q Consensus 302 ~e~~L~~ae~l~~l~~~~-----~~------~~~~~~l~~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~ 370 (930)
+|++|++||+|+++|... +. ...++.+|++|+++||||||||||+++|++||..||.+|+..++.+++.
T Consensus 404 ~e~~L~~aE~L~sla~~~~~~~~~~~~~~~~~~~L~~~wk~l~~~QhHDaItGTsk~~V~~Dy~~rl~~~~~~~~~~~~~ 483 (1050)
T PLN02701 404 LEQTLRAAEILFSFLLGYCRRFQCEKLPTSFSYKLTAARRNLALFQHHDGVTGTAKDHVVVDYGTRMHTSLQDLQIFMSA 483 (1050)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccccCCChhhHHHHHHHHHHHHhhccCcCcCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999995321 11 1235788999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcCCCCCCCCCCCccccC-CcccccCCCCCC-CCCCCCcEEEEEEcCCCceeeEEEEEEEcCCcEEEEcCCCC
Q 002366 371 SLSCLASRKSGHQCTKPASTFSQCP-LLNISYCPPTEK-GIPEGKNLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGN 448 (930)
Q Consensus 371 ~l~~L~~~~~~~~~~~~~~~~~~~~-~ln~s~~~~~~~-~~~~~~~~~vvvfNpl~~~r~~~V~i~v~~~~~~v~d~~g~ 448 (930)
+++.|+..... .+..+...|+.|. .+|++.||.+.. .+..++...|+|||||+|+|+++|+|+|+.+.+.|+|.+|+
T Consensus 484 al~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpL~~~r~~vV~v~V~~~~~~V~d~~g~ 562 (1050)
T PLN02701 484 AVEVLLGIRHE-KSDQTPSWFEPEQSRSKYDMLPVHKVINLREGKAHRVVFFNPLEQTREEVVMVVVDRPAVCVFDSNWT 562 (1050)
T ss_pred HHHHHhhcccc-ccccccccccccccccccccccccccccccCCCceEEEEECCCCceeeEEEEEEecCCcEEEEcCCCC
Confidence 99999864321 1222334577784 568899987642 23345668999999999999999999999999999999999
Q ss_pred eeeEEEEeccccccccccchhhhccCCCCCCCCcEEEEEEEeeCCCceEEEEEEecCCcccc-cccccc-----------
Q 002366 449 AINVQYVNLDNVTSNLRKFYTEAYLGQSSKRVPRYWLLFQVTVPPLGWNTYFISRAAGKVKR-RKGFFL----------- 516 (930)
Q Consensus 449 ~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vP~lG~~~y~i~~~~~~~~~-~~~~~~----------- 516 (930)
+|++|++|.+..... ......|+|+|.++||||||++|.|......... ..+.+.
T Consensus 563 ~v~~Qi~~~~~~~~~-------------~~~~~~~~l~F~a~vPplG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (1050)
T PLN02701 563 CVPSQISPEWQHDGE-------------KLFTGRHRLYWKASVPALGLETYFIANGNVSCEKAVPAKLKVFNSDDKFPCP 629 (1050)
T ss_pred EEeEEEecccccccc-------------ccccceEEEEEEEecCCceeEEEEEEEcCCCccccccccccccccccccccc
Confidence 999999987542110 0123468999999999999999999875322110 000000
Q ss_pred ---ccCCCCCCceEecCCeEEEEEECCCCceEEEEecCCCeeeeEEEEEEEeeccCCCCCCCceeEcCCCCCCcccCCCc
Q 002366 517 ---AADSPQDKTVEVGPGNLKMSFSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGAQPNVVSRSV 593 (930)
Q Consensus 517 ---~~~~~~~~~~~ieN~~~~v~~~~~~G~l~si~~k~~g~~~~~~~~~~~Y~~~~~~~~sgaYiF~P~~~~~~~~~~~~ 593 (930)
.......+.++|||++++|+||++||.|++|+++++|++..++++|.+|.+ +.||||+|+|++.+........
T Consensus 630 ~~~~~~~~~~~~~~ieN~~lkl~Fd~~TG~L~si~~~~~g~~~~v~q~f~~Y~s----~~SGAYiFrP~~~~~p~~~~~~ 705 (1050)
T PLN02701 630 EPYSCSKLEGDTVEISNSHQTLGFDVKTGLLRKIKIHKNGSETVVGEEIGMYSS----QGSGAYLFKPDGEAQPIVQAGG 705 (1050)
T ss_pred ccccccccCCCcEEEecCeEEEEEcCCCCceeEEEecccCceecceeeeeeecC----CCCcceEEcCCCCCcccCCCCc
Confidence 000112345899999999999999999999999999999999999999984 5789999999887522222223
Q ss_pred cEEEEeccceEEEEEEE-----cceEEEEEEEeec-----CCceEEEEEECCccccCCCCcEEEEEEEeeccCCCeEEEc
Q 002366 594 PIKIIRGPMVDEVHQQF-----NSWIYQVTRLYID-----KEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTD 663 (930)
Q Consensus 594 ~i~v~~G~l~~~v~~~~-----~~~i~q~irL~~~-----~~~ie~e~~v~~i~~~d~~~~e~~~rf~t~i~s~~~fyTD 663 (930)
.+.+++||++++|++.+ +++++|++|||++ ..++|+|++||+||. |..|||+++||.|+|+|++.||||
T Consensus 706 ~~~v~~Gplv~eV~~~~~~~~~~s~isQ~iRLY~~~~~~~~~~vE~e~~V~~ip~-d~~~kEii~R~~T~i~s~~~FYTD 784 (1050)
T PLN02701 706 LVVVSEGPLVQEVHSVPKTKWEKSPLSRSTRLYHGGKSVQDLSVEKEYHVELLGH-DFNDKELIVRFKTDIDNKRVFYSD 784 (1050)
T ss_pred eEEEEeCCEEEEEEEEeecccCCcceEEEEEEecCCCccccceEEEEEEecCccc-CCCCcEEEEEEeecccCCCeEEEc
Confidence 45689999999999976 5789999999998 678999999999997 678999999999999999999999
Q ss_pred cCCcceeeccccccCCcCCCccccccceEEeccceEEEEe-CCcceEEEeccccccccccCceEEEEEEeeccCCCCCCc
Q 002366 664 SNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITD-KKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGV 742 (930)
Q Consensus 664 sng~~~i~R~~~~~~~w~~~~~~pv~~nyYP~~s~~~I~D-~~~~ltvl~dr~~G~ss~~~G~ielmL~Rr~~~dD~rGv 742 (930)
+|||+|+||+ +|+ ++|++||||||++.|+|+| .+.||+|+|||++||+|+++|+||||||||+++||+|||
T Consensus 785 sNG~qm~kR~-----~~~---~~Pv~gNYYPv~s~a~IqD~~~~rltvltdrs~G~sSl~~GqLEiMLhRRLl~DD~rGv 856 (1050)
T PLN02701 785 LNGFQMSRRE-----TYD---KIPLQGNYYPMPSLAFLQGSNGQRFSVHSRQSLGVASLKNGWLEIMLDRRLVQDDGRGL 856 (1050)
T ss_pred Cccceeeeec-----ccc---cCccccccccccceEEEEcCCCCeEEEEeccCcccccCCCcEEEEEEEeecccccCccc
Confidence 9999999997 343 5999999999999999999 668999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCCeeEeeeEEEeecccCccc------------cccccchhhhcccceeeeecccccccccccc--C
Q 002366 743 GEALDESVCVRDNCEGLTVRGNYYLSVNQLGAGA------------RWRRTTGQEVYSPLLLAFTQEKLETWTESHL--T 808 (930)
Q Consensus 743 ~e~l~e~~~~~~~~~gl~~~~~~~l~~~~~~~~~------------~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~--~ 808 (930)
||+|+|+.. +..+|+|+++...... -..+..+..||+|++++++...+.. ..... .
T Consensus 857 ge~l~dnk~---------~~~~f~ll~e~~~~~~~~~~~~~~~~~Sl~sh~~~~~l~~p~~~~~~~~~~~~-~~~~~~~~ 926 (1050)
T PLN02701 857 GQGVMDNRP---------MNVVFHLLLESNISSSPPASNPLPLQPSLLSHRVGAHLNYPMHAFLAKKPQAT-SVENPQDT 926 (1050)
T ss_pred ccccccccc---------ccceEEEEEecccccCCCCCCCCcCCccHHHHHHHHhhcCCchhhcccCcccc-cccccccc
Confidence 999999753 4678999997554310 0135678889999998874332211 11122 5
Q ss_pred ccccCccCCCCCCcceEEEeeecCCC-------------cEEEEEeeccccCC--C--CCcceeeeeehhhhcccCccce
Q 002366 809 KSTAMESDYSLPLNVALITLEELDDG-------------SVLLRLAHLYEEGE--D--AEYSTLAKVELKKMFKGKSIKQ 871 (930)
Q Consensus 809 ~~s~l~~~~~lp~nv~lltlk~~~~~-------------~~llRl~~~~~~~~--~--~~~s~~~~v~l~~lf~~~~i~~ 871 (930)
+|++|.+ +||||+||+|||.+... -+|+|-+-.+..+. + |..+....|+|.+||.++.+.+
T Consensus 927 ~~~~l~~--~lpcD~hlv~lrt~~~~~~~~~~~~~~~~~~~l~r~~~d~~~~~~~~~~c~~~~~~~~~~~~lf~~l~~~~ 1004 (1050)
T PLN02701 927 SFAPLAK--PLPCDLHIVNFKVPRPSKYSQQEAEDPRFGLLLQRRGWDSSYCRKGGTQCTTLANEPVNLFDMFKDLAVSK 1004 (1050)
T ss_pred ccccccC--CCCCcEEEEEeeccCCcccccccCCCccEEEEEEecccCcccccCCCccCcccCCcccchhhhhcccceee
Confidence 7778765 89999999999965422 26667652222211 1 1111112399999999999999
Q ss_pred eeecccccccchhhcccceeeecCCCCCcCCCCCCCCCCCCCceEEecCcceeEEEEEC
Q 002366 872 LKEMSLSANQEKLEMKKMTWKVEGESGKTHSPVRGGPLDASTLVVELGPMEIRTFLLKF 930 (930)
Q Consensus 872 v~E~sLt~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~v~l~P~eIrTf~i~~ 930 (930)
+++||||...+..++.. +...- .. .++...|.|.||||+||++++
T Consensus 1005 ~~~tsl~~~~~~~~~~~--~~~~~----------~~--~~~~~~i~l~pmei~~~~~~~ 1049 (1050)
T PLN02701 1005 VKATSLNLLHDDAEMLG--YRKQA----------GS--AAQEGIVLISPMEIQAYKLDL 1049 (1050)
T ss_pred eecccccccccchhhcc--ccccc----------cc--cCCccceeeccceeeeEEEec
Confidence 99999999886554422 11100 00 122346999999999999975
No 3
>KOG1958 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-141 Score=1195.44 Aligned_cols=836 Identities=29% Similarity=0.459 Sum_probs=671.5
Q ss_pred ceeehhhHHHHhhhcCCcc-------cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCC
Q 002366 26 GIQIENLCLLKWHFSIDGG-------LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDP 98 (930)
Q Consensus 26 ~~~~e~~~~~~w~~~~~~~-------LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~ 98 (930)
=|+.|.+||.+||....|+ ||++||||||+|||||||||.+||.+||+|+++||+||+.+.|++|+++|.|||
T Consensus 208 FIwaEiS~~~~ww~~~~~~kk~a~k~lv~~GqlEIvtGGWVMpDEAn~Hy~~~i~qliEGh~Wl~~~igv~P~s~WaiDP 287 (1129)
T KOG1958|consen 208 FIWAEISFLERWWDDASPTKKNAVKRLVKNGQLEIVTGGWVMPDEANSHYFAMIDQLIEGHQWLKNNIGVTPQSGWAIDP 287 (1129)
T ss_pred hhhhhHHHHHHhhhhcChHHHHHHHHHHhcCcEEEEeCccccCcccchhHHHHHHHHhhhhhHHhccCCCCCCcccccCC
Confidence 6899999999999999985 799999999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHhcCCcEEEEeccChHhHHhhhcCCCeEEEEEcCCCCCCCcceEEeecCcC-CCCC----------CC
Q 002366 99 FGHSAVQAYLLGVELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVH-YSPP----------SG 167 (930)
Q Consensus 99 FGhs~~~P~il~~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th~~~~~-Y~~p----------~~ 167 (930)
||||++||+||+ ++||++++|+|+||..|..++.+|++||+||+.++..+.++||||+||++ |+.| ++
T Consensus 288 FG~S~TmpYLL~-~ag~~~mlIQRvHYavKk~lA~qk~leF~WRQ~wds~~~tDl~tHmMPFysYDIphTCGPdP~ICCq 366 (1129)
T KOG1958|consen 288 FGYSSTMPYLLR-RAGFENMLIQRVHYAVKKELAQQKSLEFIWRQYWDSTGDTDLLTHMMPFYSYDIPHTCGPDPKICCQ 366 (1129)
T ss_pred CCCCcchHHHHh-hcCchhHHHHHHHHHHHHHHHHhcccceeehhhccCCCCcchheeecccccccCCCccCCCCceeee
Confidence 999999999998 99999999999999999999999999999999998888899999999986 8655 37
Q ss_pred CCccccCC---CCCccCCC-CCCCCcHHHHHHHHHHHHHHhhcccCCCeeEEEecCCCCCCchhHH---HHHHHHHHHHH
Q 002366 168 FHFELTDD---FDPVQDNP-LLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESW---FKQMDKLIHYV 240 (930)
Q Consensus 168 f~f~~~~~---~~p~~~~~-~~~~~nv~~~~~~~~~~~~~~~~~~~t~~iL~~~G~Df~y~~a~~~---~~~~~~li~~i 240 (930)
|||.+++. .|||..+| .|++.||++||+.+++|++++++.|++|.+|+|.||||+|....+| |.|+.+|+++|
T Consensus 367 FDFkRmpg~~~~Cpw~vpP~~It~~NVa~rA~~LldQyrKkS~Lfr~nVlLiPlGDDFRy~~~~Ewd~Q~~NY~~LFD~i 446 (1129)
T KOG1958|consen 367 FDFKRMPGGGCECPWGVPPEKITDANVAARAELLLDQYRKKSELFRTNVLLIPLGDDFRYDKITEWDQQFDNYQKLFDHI 446 (1129)
T ss_pred eecccCCCCCcCCCCCCCCeeechhhHHHHHHHHHHHHHHHhhhcccceEEEecCCccccCccHHHHHHHHHHHHHHHHH
Confidence 99988753 68997666 7999999999999999999999999999999999999999976555 99999999999
Q ss_pred hcCC--CeEEEeCChhhHHHHHHhc-------CCCCCCccCCcccccccCCCceeeeeecchhhHHHHHHHhHHHHHHHH
Q 002366 241 NKGG--RVNALYSTPSLYTEAKNAA-------NGPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQ 311 (930)
Q Consensus 241 N~~~--~~~i~~sT~~~Yf~a~~~~-------~~~~p~~~gDffpy~~~~~~ywtG~yTSr~~~K~~~R~~e~~L~~ae~ 311 (930)
|+.+ ++.++|+|++|||+++++. ...||+++||||+|||+.++||+|||||||.+|++.|.+|++||+||.
T Consensus 447 Ns~~~~nv~aqFGTlsDYF~al~k~~~e~~kg~~~FPtlSGDFFtYaDr~d~YWSGYyTSRPFyK~ldRvLeh~lR~AEI 526 (1129)
T KOG1958|consen 447 NSRPLLNVQAQFGTLSDYFDALDKAYSERGKGQEPFPTLSGDFFTYADRDDHYWSGYYTSRPFYKRLDRVLEHYLRSAEI 526 (1129)
T ss_pred hcccccceeeecCCHHHHHHHHHHhhccccCCCCCCcccccCceeeecccCccceeeeecchHHHHHHHHHHHHHhhHHH
Confidence 9865 6889999999999999875 134899999999999999999999999999999999999999999999
Q ss_pred HHHhhcC----CCCC--------CCchHHHHHHhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 002366 312 LEFLAGK----KSPG--------PTTSALGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRK 379 (930)
Q Consensus 312 l~~l~~~----~~~~--------~~~~~l~~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~ 379 (930)
|+++|.. .+.. ..+.++||+|+++|||||||||||++|+.||..||..++..++.++.+++..|+.+.
T Consensus 527 l~s~a~~~~~r~~~~~r~~~~~~~~L~~ARRnL~LFQHHDaITGTaK~~Vv~DYg~rl~~Sl~~~~~v~~~~~~~Ll~~~ 606 (1129)
T KOG1958|consen 527 LFSLALAHAHRVGLAQRIEESNYELLTAARRNLGLFQHHDAITGTAKDAVVVDYGQRLHESLVNLQIVLENALELLLGKD 606 (1129)
T ss_pred HHHHHHHHHHHhhhhhhcchhHHHHHHHHHHhhhhhhcccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9986421 1111 135667999999999999999999999999999999999999999999999998754
Q ss_pred CCCCCCCCCCCccccCCc--ccccCCC-CCCCCCCCCcEEEEEEcCCCceeeEEEEEEEcCCcEEEEcCCCCeeeEEEEe
Q 002366 380 SGHQCTKPASTFSQCPLL--NISYCPP-TEKGIPEGKNLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVN 456 (930)
Q Consensus 380 ~~~~~~~~~~~~~~~~~l--n~s~~~~-~~~~~~~~~~~~vvvfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~ 456 (930)
.......+...+-+.... +.+.-|. +-..+ +.....||+||||.+.|.++|+|.|+.+.+.|.+..|++|++|+.|
T Consensus 607 ~~~y~~~~~~~~~emd~~r~~~~~~pek~~~~~-~~~~~~vvlfN~l~q~R~evv~i~V~sp~V~V~~d~g~pv~~Qisp 685 (1129)
T KOG1958|consen 607 SETYNSDPSHSFIEMDDIRDSEDSLPEKTVIGL-SSGPRSVVLFNPLEQEREEVVTIRVNSPEVSVLDDGGVPVEAQISP 685 (1129)
T ss_pred ccccccCCCCCceehhhcccCCCcCcccceeec-cCCCceEEEeccchhhhhccEEEEecCCeeEEEcCCCceeeEeecc
Confidence 311111111111110000 1111111 00112 2233679999999999999999999999999999999999999999
Q ss_pred ccccccccccchhhhccCCCCCCCCcEEEEEEEeeCCCceEEEEEEecCCccccc-ccc---ccc-----c--CCCCCCc
Q 002366 457 LDNVTSNLRKFYTEAYLGQSSKRVPRYWLLFQVTVPPLGWNTYFISRAAGKVKRR-KGF---FLA-----A--DSPQDKT 525 (930)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vP~lG~~~y~i~~~~~~~~~~-~~~---~~~-----~--~~~~~~~ 525 (930)
++.++.+. ....+.|+|.|.+.|||||..+|++..+....... .++ +.. . .....+.
T Consensus 686 vw~~~~tk------------~~~~~~~~l~f~a~vpplgl~v~~~~~~~~~~~~~l~s~~~~~~~~~~~s~~~~~~~~~~ 753 (1129)
T KOG1958|consen 686 VWQDTKTK------------TIKPGSYRLSFKATVPPLGLMVLRIDSGGLTEHAKLPSKDTSFPAWDLGSSSTIGDSREL 753 (1129)
T ss_pred ceeccccc------------eeecceeEEEEEEecccceeeEEEeeccCcccccccccCCCCcccCCCccceeecCcccc
Confidence 99632210 01223699999999999999999998763322111 111 000 0 0111223
Q ss_pred eEecCCeEEEEEECCCCceEEEEecCCCeeeeEEEEEEEeeccCCCCCCCceeEcCCCCC-CcccCCCccEEEEeccceE
Q 002366 526 VEVGPGNLKMSFSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGAQ-PNVVSRSVPIKIIRGPMVD 604 (930)
Q Consensus 526 ~~ieN~~~~v~~~~~~G~l~si~~k~~g~~~~~~~~~~~Y~~~~~~~~sgaYiF~P~~~~-~~~~~~~~~i~v~~G~l~~ 604 (930)
.+++|++..+.|++++|.|+++..+.++....++..|.-|....+++.||||+|.|+|++ |+..-....|.+ +|+|++
T Consensus 754 s~~~~~~~~l~fd~~~G~i~~~~~~~D~~~~~~q~~f~~y~~~~~~~~sgaylf~p~G~a~~~i~~~~p~v~v-~g~L~q 832 (1129)
T KOG1958|consen 754 STLRNEYFELRFDPETGTIKSINSLSDNKHFESQVSFSNYGERISGDESGAYLFLPDGNAKPIIELQWPHVRV-KGPLVQ 832 (1129)
T ss_pred ceeeccceeEEeccccchhhhhhhcccCCCcccceeeccccccccCCCCceEEEccCCCCCCceecCCCeEEe-ecceee
Confidence 589999999999999999999988878888888888888877656788999999999985 433333456666 999999
Q ss_pred EEEEEEcc---eEEEEEEEeecCCceEEEEEECCccccCCCCcEEEEEEEeeccCCCeEEEccCCcceeeccccccCCcC
Q 002366 605 EVHQQFNS---WIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWS 681 (930)
Q Consensus 605 ~v~~~~~~---~i~q~irL~~~~~~ie~e~~v~~i~~~d~~~~e~~~rf~t~i~s~~~fyTDsng~~~i~R~~~~~~~w~ 681 (930)
+|.+..++ ...|.+++|.|. .+|++..|| +....+.|+++||.|++++...||||+||+||++|.+.
T Consensus 833 ev~~~~~~v~~~~~~~~~~~~G~-~vei~~~vd---i~~~~n~Ela~R~st~vds~~~FyTDlnG~Q~~kR~~~------ 902 (1129)
T KOG1958|consen 833 EVSQFLKNVLHRLSQNVRGYSGE-EVEISNSVD---IRKEDNTELAMRFSTDVDSGDLFYTDLNGMQMIKRRRL------ 902 (1129)
T ss_pred eeccccchHHHhchhheeccCCc-ceeeeceee---cccccchhhhhhhhhcccCCceeeeccchhhhhhhhhc------
Confidence 99987643 233789999986 678877775 43456899999999999999999999999999999764
Q ss_pred CCccccccceEEeccceEEEEeCCcceEEEeccccccccccCceEEEEEEeeccCCCCCCcccccccccccccCCCCeeE
Q 002366 682 LQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTV 761 (930)
Q Consensus 682 ~~~~~pv~~nyYP~~s~~~I~D~~~~ltvl~dr~~G~ss~~~G~ielmL~Rr~~~dD~rGv~e~l~e~~~~~~~~~gl~~ 761 (930)
.+.|+++|||||.++++|+|.+.+|++++.+++|++|+.+|+||||++||+..||+||||+++.|+.. +
T Consensus 903 --~KlPlQaNyYPmpt~a~Iq~~~~RlsihS~q~lGvssL~sG~iEIm~DRrL~~DD~rGLgqGv~DNk~---------t 971 (1129)
T KOG1958|consen 903 --DKLPLQANYYPMPTAAFIQDAKQRLSIHSAQSLGVSSLESGQIEIMLDRRLNQDDGRGLGQGVIDNKP---------T 971 (1129)
T ss_pred --ccCcccceeecccceeeeecCCceEEEEeecccCccccccceEEEEecccccCCCCccccccccccch---------h
Confidence 46899999999999999999999999999999999999999999999999999999999999988743 3
Q ss_pred eeeEEEeecccCcccc------------ccccchhhhcccceeeeeccccccccccccCccccCccCCCCCCcceEEEee
Q 002366 762 RGNYYLSVNQLGAGAR------------WRRTTGQEVYSPLLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLE 829 (930)
Q Consensus 762 ~~~~~l~~~~~~~~~~------------~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~s~l~~~~~lp~nv~lltlk 829 (930)
...|+|++++.+.... ..+...+.+++|+..++.... ++.+. ...+.++.. ++||++|++|++
T Consensus 972 ~~~frlv~e~~~s~~~p~e~~~~~~ps~~ah~a~~~l~yP~~~f~~~~p--k~i~~-~g~~~~~~~--~lpcDl~lvt~r 1046 (1129)
T KOG1958|consen 972 DMKFRLVLESLNSAQDPTENSRVSYPSLAAHLASQSLNYPLMKFIYAEP--KKIED-QGIFEPLNL--SLPCDLHLVTFR 1046 (1129)
T ss_pred hheeeeeecccccccCchhcCCCCChhhhhhcccceecCCchhhcccCC--CChhh-ccccccccC--CCccceeEEEee
Confidence 5578888876653211 125567788999988773322 22221 334555554 899999999999
Q ss_pred ecCCCc--------EEEEEeeccccCC-CCCcceeeeeehhhhcccCccceeeecccccccchhhcccceeeecCCCCCc
Q 002366 830 ELDDGS--------VLLRLAHLYEEGE-DAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVEGESGKT 900 (930)
Q Consensus 830 ~~~~~~--------~llRl~~~~~~~~-~~~~s~~~~v~l~~lf~~~~i~~v~E~sLt~~~~~~~~~r~~w~~~~~~~~~ 900 (930)
++++.. +|.|-+ ..|+. +...+...++++.+++.. +.+++.|+|++.+.....
T Consensus 1047 tl~~~~~~~~~~~lil~R~~--~~c~~~~~g~c~~~ki~~~~ll~~--~~~v~~tsLs~l~~~~~~-------------- 1108 (1129)
T KOG1958|consen 1047 TLESSKAAEKRAALILHRHA--TDCRSQKKGTCGQLKISVMDLLIK--AKSVKKTSLSLLQEVGGI-------------- 1108 (1129)
T ss_pred eccCcccccccceeeeeecc--cccccccccccccccCcHHHHHHH--HHhhchhhHHhhhhcccC--------------
Confidence 997542 555653 33321 111122347788888887 889999999997754322
Q ss_pred CCCCCCCCCCCCCceEEecCcceeEEEEEC
Q 002366 901 HSPVRGGPLDASTLVVELGPMEIRTFLLKF 930 (930)
Q Consensus 901 ~~~~~~~~~~~~~~~v~l~P~eIrTf~i~~ 930 (930)
.+. ....++||||++|++.+
T Consensus 1109 ------~~~----~~~~~~pme~~~~l~~~ 1128 (1129)
T KOG1958|consen 1109 ------IGV----EEQELSPMEISAFLTSL 1128 (1129)
T ss_pred ------CCc----ccccccccccccccccc
Confidence 011 13456999999998753
No 4
>PRK09819 alpha-mannosidase; Provisional
Probab=100.00 E-value=1.4e-97 Score=920.12 Aligned_cols=788 Identities=14% Similarity=0.181 Sum_probs=571.4
Q ss_pred hhhhhhhhhhhhhccccc----ce---eehhhHHHHhhhcCCcc-------cccccceEEeccceeeecCCCCCHHHHHH
Q 002366 8 FRVLVWRMCWTQLWKLCV----GI---QIENLCLLKWHFSIDGG-------LGKVQKYKNKNGGWCMHDEATTHYVDMID 73 (930)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~----~~---~~e~~~~~~w~~~~~~~-------LV~~GrlE~vgGgwv~~Dea~~~~esiIr 73 (930)
+|..+.+++.+.+-.+.. .+ +.++++++.|| +.+|+ ||++||| ++||||||+||+++|||||||
T Consensus 25 ~~~~~~~~~~~vl~lle~~p~~~f~~~d~q~~~l~~~~-~~~Pe~~~~ik~lV~~Grl-~~G~W~v~~D~~l~sgEsliR 102 (875)
T PRK09819 25 SRILLVNNMEEILDRLEQDNDYKYYVLDGQTSLLEDYL-AVKPEDKERVKKLVQAGKL-IIGPWYTQTDQLVVSGESIVR 102 (875)
T ss_pred hHHHHHHHHHHHHHHHHhCCCcceEEEchhHHHHHHHH-HhChHHHHHHHHHHHcCCE-eECcEEeecccccCCHHHHHH
Confidence 455666777777776665 22 23677776677 67885 6999999 577777999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCcceeecCCCCCchHHHHHHHHhcCCcEEEEeccChHhHHhhhcCCCeEEEEEcCCCCCCCcce
Q 002366 74 QTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQI 153 (930)
Q Consensus 74 Ql~~G~~~l~~~FG~~p~vgW~iD~FGhs~~~P~il~~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i 153 (930)
||++||+|+ ++||..|++||+|||||||++|||||+ +|||+++++||+..+ +...+..+|+|+|+| ||+|
T Consensus 103 qll~G~~~~-~~fG~~~~vgwlpD~FG~s~~lPqIl~-~~Gi~~~~~wr~~~~----~~~~~~~~F~W~g~D----Gs~V 172 (875)
T PRK09819 103 NLLYGIRDC-REFGEPMKIGYLPDSFGQSGQMPQIYN-GFGITRTLFWRGVSD----RHGTDKTEFLWQSDD----GSEV 172 (875)
T ss_pred HHHHHHHHH-HHcCCCCceeeecCCCCCcHHHHHHHH-hCCCCeEEEEecccc----cccCCCceEEEECCC----CCeE
Confidence 999999998 799999999999999999999999998 999999999997532 112356799999999 9999
Q ss_pred EEeecCcCCCCCCCCCccccCCCCCccCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCeeEEEecCCCCCCchhHHHHHH
Q 002366 154 FTNAFPVHYSPPSGFHFELTDDFDPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQM 233 (930)
Q Consensus 154 ~th~~~~~Y~~p~~f~f~~~~~~~p~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~iL~~~G~Df~y~~a~~~~~~~ 233 (930)
|||++|.+|+.+..+ .....+++++++.+++.++++ ..++++|+|+|+|+.+. .++|
T Consensus 173 ~t~~~~~~Y~~g~~~---------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~G~d~~p~-----~~~~ 229 (875)
T PRK09819 173 LAQQLPLGYAIGKYL---------------PEDEEELKKRLDEYFGVLEKK---SSTKNILLPNGHDQMPL-----QKNL 229 (875)
T ss_pred EEEECccccccCCCC---------------CcCHHHHHHHHHHHHHHHhhc---CCCCcEEEecCCCCCcc-----cccH
Confidence 999999999764321 123456777777776666554 46899999999998532 3467
Q ss_pred HHHHHHHhcC-CCeEEEeCChhhHHHHHHhcCCCCCCccCCccc--ccccCCCceeeeeecchhhHHHHHHHhHHHHH-H
Q 002366 234 DKLIHYVNKG-GRVNALYSTPSLYTEAKNAANGPWPLKTDDYFP--YADRRNAYWTGFFTSRPALKGYVRVLSGFYLA-S 309 (930)
Q Consensus 234 ~~li~~iN~~-~~~~i~~sT~~~Yf~a~~~~~~~~p~~~gDffp--y~~~~~~ywtG~yTSr~~~K~~~R~~e~~L~~-a 309 (930)
.++|+.+|+. +.+++++||+++||++++++...||++.|||+. |. .+|+||||||+++|++||++|++|+. +
T Consensus 230 ~e~i~~~~~~~~~~~~~~st~~~yf~~l~~~~~~lp~~~GEl~~~~y~----~~HrG~~TSr~~iK~~nr~~E~~L~~~~ 305 (875)
T PRK09819 230 FEVMDKLNEIYPEREFVISRFENVFEKLEKQRDNLPTLKGEFIDGKYM----RVHRSIFSTRMDIKIANARIENKIVNVL 305 (875)
T ss_pred HHHHHHHHhhCCCCcEEECCHHHHHHHHHhhcCCCCeeeeecCCCccc----cccCCccccHHHHHHHHHHHHHHHHHHh
Confidence 7777777764 468999999999999999877889999999984 32 46799999999999999999999974 9
Q ss_pred HHHHHhhcCCCCC---CCchHHHHHHhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCCC
Q 002366 310 RQLEFLAGKKSPG---PTTSALGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTK 386 (930)
Q Consensus 310 e~l~~l~~~~~~~---~~~~~l~~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~ 386 (930)
|+|+++|...+.. ..++++|+.|+++||||+||||++++|++|+..||.++.+.++.+++.+++.|+....
T Consensus 306 E~l~~la~~~g~~yp~~~l~~~Wk~ll~nq~HD~i~G~sid~V~~d~~~r~~~~~~~~~~l~~~~l~~l~~~i~------ 379 (875)
T PRK09819 306 EPLASIAYSLGFEYPHGLLEKIWKEMFKNHAHDSIGCCCSDTVHRDIVARYKLAEDLADNLLDFYMRKIADNMP------ 379 (875)
T ss_pred chHHHHHHHcCCCCCHHHHHHHHHHHHHhcCCCcccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------
Confidence 9999997654322 2578899999999999999999999999999999999999999999999999875320
Q ss_pred CCCCccccCCcccccCCCCCCCCCCCCcEEEEEEcCCCceeeEEEEEEE--cCCcEEEEcCCCCeeeEEEEecccccccc
Q 002366 387 PASTFSQCPLLNISYCPPTEKGIPEGKNLVVAAYNPLGWNRTDIIRIPV--NDANLIVKDPLGNAINVQYVNLDNVTSNL 464 (930)
Q Consensus 387 ~~~~~~~~~~ln~s~~~~~~~~~~~~~~~~vvvfNpl~~~r~~~V~i~v--~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~ 464 (930)
.++...++||||++|+|+++|++++ +...+.+.|.+|++|++|+......+..+
T Consensus 380 ------------------------~~~~~~~~vfN~l~~~r~~~v~i~~~~~~~~~~~~d~~g~~v~~~v~~~~~~~~~~ 435 (875)
T PRK09819 380 ------------------------QSDADKLTVFNLLPYEREEVINTTVYLPASQFTLRDDRGNPLPYTIREKRDIDPGL 435 (875)
T ss_pred ------------------------cCCCCEEEEEcCCCccceeEEEEEEEeccCCEEEECCCCCEeeEEEeeccccccch
Confidence 1234588999999999999999876 45678999999999999998654322111
Q ss_pred ccchhhhccCCCCCCCCcEEEEEEE-eeCCCceEEEEEEecCCccccccccccccCCCCCCceEecCCeEEEEEECCCCc
Q 002366 465 RKFYTEAYLGQSSKRVPRYWLLFQV-TVPPLGWNTYFISRAAGKVKRRKGFFLAADSPQDKTVEVGPGNLKMSFSRTTGQ 543 (930)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~l~f~~-~vP~lG~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~ 543 (930)
........ +. ......+.+.|.+ .||||||++|.+......... .........|||++|+|+|+ ++|.
T Consensus 436 ~~~~~~~~-~~-~~~~~~~~i~f~~~~vP~lG~~~~~i~~~~~~~~~--------~~~~~~~~~ieN~~~~v~i~-~~G~ 504 (875)
T PRK09819 436 LDRQIVHY-GN-YDPFMEFDIQINVQILPAMGYRTLYIELNEEGNVI--------EPKSSAEGIIENEFYQITLN-ENGT 504 (875)
T ss_pred hhcceecc-CC-CCceEEEEEEEEECCCCCcccEEEEEEeCCccccc--------cccccccceEecCcEEEEEe-cCCc
Confidence 00000000 00 0001246788884 899999999998764332110 01223457899999999999 6899
Q ss_pred eEEEEecCCCeeeeEEEEEEEeeccCCCCCCCceeEcCCCCC-CcccCC-CccEEEEeccceEEEEEEEc----------
Q 002366 544 LKRMYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGAQ-PNVVSR-SVPIKIIRGPMVDEVHQQFN---------- 611 (930)
Q Consensus 544 l~si~~k~~g~~~~~~~~~~~Y~~~~~~~~sgaYiF~P~~~~-~~~~~~-~~~i~v~~G~l~~~v~~~~~---------- 611 (930)
| +|+||++|+++ .++..|++. ++.+++|+|.|...+ ...... ...+.+++|++++++++++.
T Consensus 505 l-~l~dk~~gr~~---~~~~~~~d~--~d~gD~yd~~p~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~~~~~~p~~~~~r 578 (875)
T PRK09819 505 L-TIVDKKSGKTY---DRQLIIEEN--GDDGDEYDYSPPREDWVITSAEAVPSVEISHSAWQSRAVIRYRLAVPKNLEER 578 (875)
T ss_pred E-EEEECCCCcEE---eceEEEEec--CcCCCCcccCCCCCCCEEeccCCcceEEEEEcCCeEEEEEEEEEeCCcChhhH
Confidence 9 59999999987 345566654 678999999986554 222222 34677888999888887642
Q ss_pred --------ceEEEEEEEeecCCceEEEEEECCccccCCCCcEEEEEEEeeccCCCeEEEccCCcceeeccccc--cCCcC
Q 002366 612 --------SWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDY--RADWS 681 (930)
Q Consensus 612 --------~~i~q~irL~~~~~~ie~e~~v~~i~~~d~~~~e~~~rf~t~i~s~~~fyTDsng~~~i~R~~~~--~~~w~ 681 (930)
+.++|+++|++++++|+|++.|+.. ..+|.+.+.|+++|.++.++| | .+||.|+|+++. .++|+
T Consensus 579 ~~~~~~~~~~i~~~i~L~~~s~~i~~~~~vdw~----~~~~~Lrv~fp~~i~~~~~~~-d-~~fG~i~Rp~~~~~~~~W~ 652 (875)
T PRK09819 579 AAGQKTGRMPVKLVVTLSKNSRRIDFDVNLDNQ----ADDHRLRVLFPTEIASKFSLA-D-QQFGSITRPVNDPAMDVWE 652 (875)
T ss_pred hhccccceEEEEEEEEEecCCCEEEEEEEEecc----ccceEEEEEccCCCCCCceEc-C-CCceEEECCCcCccccccc
Confidence 4688999999999999999999832 234455555999999987755 4 999999999865 36899
Q ss_pred CCccccccceEEeccceEEEEeCCcceEEEeccccccccccC--ceEEEEEEeeccC---CC-----CCCcccccccccc
Q 002366 682 LQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKD--GQVEIMLHRRMLA---DD-----GRGVGEALDESVC 751 (930)
Q Consensus 682 ~~~~~pv~~nyYP~~s~~~I~D~~~~ltvl~dr~~G~ss~~~--G~ielmL~Rr~~~---dD-----~rGv~e~l~e~~~ 751 (930)
.+.++..+-+.||+.+|++|+|.++|++|+||++||.....+ ++|.|+|.|+..+ +| +|+-|..+-+..
T Consensus 653 ~~~~~e~p~~~~~~~~~v~ls~~~~Gvall~dg~~ey~v~g~~~~~i~LTLlRs~g~lgk~~l~~rpgr~sG~~~ptP~- 731 (875)
T PRK09819 653 QEGWQEAPISIEPMQSFVALHDERHGVAVFTEGVREYEIIGENYDTIALTLFRGVGLLGKEDLLYRPGRPSGIKIPTPD- 731 (875)
T ss_pred cccceeCCCCChhhhceEEEecCCceEEEECCCcceEEEecCCCCeEEEEeecccCccCCCccccCCCcccCCccCCCh-
Confidence 887765556689999999999999999999999999744332 4899999999843 11 122221111100
Q ss_pred cccCCCCeeEeeeEEEee--cccCccccccccchhhhcccceeeeeccc----cccccccccCccccCccCCCCCCcceE
Q 002366 752 VRDNCEGLTVRGNYYLSV--NQLGAGARWRRTTGQEVYSPLLLAFTQEK----LETWTESHLTKSTAMESDYSLPLNVAL 825 (930)
Q Consensus 752 ~~~~~~gl~~~~~~~l~~--~~~~~~~~~~~~~~~~l~~p~~~~~~~~~----~~~~~~~~~~~~s~l~~~~~lp~nv~l 825 (930)
.+|.|- .+.+|.|.+ +....+. ..+.+++++.|+.++..... ..........++|.+. ..++++.+
T Consensus 732 --aq~~G~-h~f~y~l~ph~g~~~~~~--~~~~a~~~n~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~---~~~~~i~~ 803 (875)
T PRK09819 732 --SQLLGE-LSFRFSLTSYEGTFDEAG--VAQQAKEYLTPVQCYNKIPFLNMRLNDEEFTLPESYSLLK---MPPDGAVL 803 (875)
T ss_pred --HHhcCc-eEEEEEEEEccCCcchHH--HHHHHHHhccCcceeecccccccccCcccCCCCcccccee---eCCCCEEE
Confidence 112342 234455543 2222222 24578899999987531110 0000011122344432 23468999
Q ss_pred EEeeecCCC-cEEEEEeeccccCCCCCcceeeeeehhhhcccCccceeeecccccccchhhcccceeeecCCCCCcCCCC
Q 002366 826 ITLEELDDG-SVLLRLAHLYEEGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVEGESGKTHSPV 904 (930)
Q Consensus 826 ltlk~~~~~-~~llRl~~~~~~~~~~~~s~~~~v~l~~lf~~~~i~~v~E~sLt~~~~~~~~~r~~w~~~~~~~~~~~~~ 904 (930)
.++|+++|+ .++||+. +...... ..+.+.+ +..+..+.|++|.+... .+. .
T Consensus 804 sa~K~aed~~~~ilRly---n~~~~~~--~~~~l~~-----~~~~~~~~~~~l~E~~~-~~~-----~------------ 855 (875)
T PRK09819 804 SAVKKAEDRDGLILRFF---NPAESKT--CDATVAF-----SKEVKSLDETMLDEKIT-TEE-----N------------ 855 (875)
T ss_pred EEEEEeccCCCEEEEEe---CCCCCcc--cccccee-----ccchhheeecccccccc-ccc-----c------------
Confidence 999999876 4999994 4421110 0112221 33566788999988652 111 0
Q ss_pred CCCCCCCCCceEEecCcceeEEEEE
Q 002366 905 RGGPLDASTLVVELGPMEIRTFLLK 929 (930)
Q Consensus 905 ~~~~~~~~~~~v~l~P~eIrTf~i~ 929 (930)
+.... .++|+|.||+|++|+
T Consensus 856 ----~~~~~-~~~~~p~eI~T~~i~ 875 (875)
T PRK09819 856 ----QGSNL-SGELKPCQVQTFLVK 875 (875)
T ss_pred ----ccccc-cccccCCeeEEEEeC
Confidence 01111 257999999999984
No 5
>KOG4342 consensus Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-77 Score=651.06 Aligned_cols=704 Identities=17% Similarity=0.210 Sum_probs=521.3
Q ss_pred ceeehhhHHHHhhhcCCccc-------ccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCC
Q 002366 26 GIQIENLCLLKWHFSIDGGL-------GKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDP 98 (930)
Q Consensus 26 ~~~~e~~~~~~w~~~~~~~L-------V~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~ 98 (930)
-+.|..|+.++|++|..|+| +.+||+-.|||.||++|.++|+|||||||++.|+.|+.++||.+.+.-|+||+
T Consensus 324 ~FvcSQAqQ~~WlkedhP~~f~kl~e~~~q~qF~pvGGtWVE~DtNiPsGEslvRQFl~GQ~FFlkeFG~~c~~FWLPDT 403 (1078)
T KOG4342|consen 324 IFVCSQAQQLEWLKEDHPGLFSKLQEFACQGQFVPVGGTWVEMDTNIPSGESLVRQFLQGQNFFLKEFGKMCSEFWLPDT 403 (1078)
T ss_pred eEehhhHHHHHHHhhhChhHHHHHHHHHhcCceeeccceEEecCCCCCChHHHHHHHHhhhhHHHHHhhhhhcceecccc
Confidence 34577999999999999974 78899999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHhcCCcEEEEeccChHhHHhhhcCCCeEEEEEcCCCCCCCcceEEeecCcC-CCCCCCCCccccCCCC
Q 002366 99 FGHSAVQAYLLGVELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVH-YSPPSGFHFELTDDFD 177 (930)
Q Consensus 99 FGhs~~~P~il~~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th~~~~~-Y~~p~~f~f~~~~~~~ 177 (930)
||+|++||||.+ .+||+.|+++++.|+..|.++.. .|.|.|.| ||+|++|+.|.. |....
T Consensus 404 FGYSsQ~PQicr-lcGidrFLTQKLSWNniNSFPhs---TFnW~glD----GSqvl~HmPPgntYtad~----------- 464 (1078)
T KOG4342|consen 404 FGYSSQLPQICR-LCGIDRFLTQKLSWNNINSFPHS---TFNWEGLD----GSQVLVHMPPGNTYTADG----------- 464 (1078)
T ss_pred ccccchhhHHHH-hhcHHHHHHhhccccccCcCCcc---ceeeeecc----CceEEEecCCCCcccccC-----------
Confidence 999999999998 99999999999999988877765 99999999 999999998754 65422
Q ss_pred CccCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCeeEEEecCCCCCCchhHHHHHHHHHHH--HH-hcCC-CeEEEeC-C
Q 002366 178 PVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIH--YV-NKGG-RVNALYS-T 252 (930)
Q Consensus 178 p~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~iL~~~G~Df~y~~a~~~~~~~~~li~--~i-N~~~-~~~i~~s-T 252 (930)
| +.+.+..+......-+.++-|+.+|-+...+ +++-++++||.+ .+ |.++ -++++.+ |
T Consensus 465 -----------~----v~dVL~tv~qnk~~~~~~~gl~lfG~GDGGG--GPT~eML~klrR~r~~~Nt~G~lP~vqlg~t 527 (1078)
T KOG4342|consen 465 -----------S----VEDVLKTVAQNKDKGRANHGLFLFGFGDGGG--GPTQEMLDKLRRIRSLSNTDGVLPRVQLGIT 527 (1078)
T ss_pred -----------c----HHHHHHHHHhcCCccccCcceEEEEecCCCC--CCcHHHHHHHHHhhcccccCCcccceeecCC
Confidence 2 2334444544444455667777777444333 344556666543 23 3444 5789998 9
Q ss_pred hhhHHHHHHhc---CCCCCCccCCcccccccCCCceeeeeecchhhHHHHHHHhHHHHHHHHHHHhhcCCCC---CC--C
Q 002366 253 PSLYTEAKNAA---NGPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGKKSP---GP--T 324 (930)
Q Consensus 253 ~~~Yf~a~~~~---~~~~p~~~gDffpy~~~~~~ywtG~yTSr~~~K~~~R~~e~~L~~ae~l~~l~~~~~~---~~--~ 324 (930)
+++||+++.+. +..+|+|.||+|. ++|+|+|||++.+|+++|++|..|+.+|.+.++|...+. .+ .
T Consensus 528 vdeffd~ilkrtnqg~~LptW~GELyf------EfHrGTYTtqAq~KKlmR~~Ei~LHD~E~~sslas~~s~dy~YP~~q 601 (1078)
T KOG4342|consen 528 VDEFFDAILKRTNQGHDLPTWVGELYF------EFHRGTYTTQAQIKKLMRECEIILHDVELLSSLASARSADYLYPAAQ 601 (1078)
T ss_pred HHHHHHHHHhhhccCCcccccchheEE------EEecCceeeHHHHHHHHHHHHHHhhhHHHHHHHHHhhcccccCcHHH
Confidence 99999999765 3569999999998 799999999999999999999999999999998764332 22 4
Q ss_pred chHHHHHHhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCCCCCCCccccCCcccccCCC
Q 002366 325 TSALGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPASTFSQCPLLNISYCPP 404 (930)
Q Consensus 325 ~~~l~~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~ln~s~~~~ 404 (930)
++.||+.++++||||.+||++++-|+++.+-.|+...+.++.++..+++.|....
T Consensus 602 lq~LWr~~LLcQFHDVlpGSCIeMVykeA~p~~~~v~k~~~tLl~~a~~~L~as~------------------------- 656 (1078)
T KOG4342|consen 602 LQHLWRLLLLCQFHDVLPGSCIEMVYKEAMPHYEDVRKHGNTLLSAAAAALCASE------------------------- 656 (1078)
T ss_pred HHHHHHHHHHHHhcccCCcHHHHHHHHhhhhHHHHHHHhhHHHHHHHHHHHhcCC-------------------------
Confidence 6789999999999999999999999999999999999999999999999885321
Q ss_pred CCCCCCCCCcEEEEEEcCCCceeeEEEEEEEcCCcEEEEcCCCCeeeEEEEeccccccccccchhhhccCCCCCCCCcEE
Q 002366 405 TEKGIPEGKNLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQSSKRVPRYW 484 (930)
Q Consensus 405 ~~~~~~~~~~~~vvvfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (930)
+++ -.+++.|+|+|.|-+++.++-+.... ...
T Consensus 657 ------s~k-e~L~~~nTLpW~~~~v~~~~kp~k~~----------~~e------------------------------- 688 (1078)
T KOG4342|consen 657 ------SGK-EGLLIVNTLPWKRIEVMALPKPGKAH----------SLE------------------------------- 688 (1078)
T ss_pred ------CCc-cceEEEeccccceeeeecccCCCCce----------eEE-------------------------------
Confidence 122 25789999999999998876442211 111
Q ss_pred EEEEEeeCCCceEEEEEEecCCccccccccccccCCCCCCceEecCCeEEEEEECCCCceEEEEecCCCeeee-------
Q 002366 485 LLFQVTVPPLGWNTYFISRAAGKVKRRKGFFLAADSPQDKTVEVGPGNLKMSFSRTTGQLKRMYNSRTGVDVP------- 557 (930)
Q Consensus 485 l~f~~~vP~lG~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~l~si~~k~~g~~~~------- 557 (930)
..++|.+|++... +... .+.. -...+.+++.|+.+||++++ +|.|+||+|...|+++.
T Consensus 689 ---~c~~~g~~ta~vt-----~~~~----p~~~--yq~Dd~~~L~Ng~lrV~i~p-~G~itSl~d~~~grE~ld~~~Grn 753 (1078)
T KOG4342|consen 689 ---LCTVPGMGTAPVT-----PPTS----PVFV--YQTDDSVTLDNGILRVKIDP-TGRITSLVDVASGREALDTAEGRN 753 (1078)
T ss_pred ---EeccCCccccCCC-----CCCC----ceeE--EecCCeEEEECCEEEEEECC-CCceeeeeehhcccchhccccccc
Confidence 1345555543311 0000 0000 12346689999999999994 89999999988887753
Q ss_pred --EEEEEEEeeccCCC-CCCCceeEcCCCCCCcccCCC-ccEEE-EeccceEEEEEEE----cceEEEEEEEeecC----
Q 002366 558 --IQQSFLWYGSMVDT-QSSGAYIFRPNGAQPNVVSRS-VPIKI-IRGPMVDEVHQQF----NSWIYQVTRLYIDK---- 624 (930)
Q Consensus 558 --~~~~~~~Y~~~~~~-~~sgaYiF~P~~~~~~~~~~~-~~i~v-~~G~l~~~v~~~~----~~~i~q~irL~~~~---- 624 (930)
..++|..|++.+-+ ++.+.=+|.-. .+++-++ ..+.| .+|+++..+.+.+ ++.++|+|.|..+.
T Consensus 754 ~~GaNQfVlfdD~PL~WqAWDte~ysle---~y~vl~k~k~v~v~~~g~lr~sv~v~~qISe~s~~k~~isL~~~~~~ak 830 (1078)
T KOG4342|consen 754 AVGANQFVLFDDVPLYWQAWDTEDYSLE---RYPVLGKAKTVAVGTEGGLRGSVWVLLQISENSRLKQEISLDVGCTDAK 830 (1078)
T ss_pred ccCcccEEEecCCccchhhhhhhhhcee---cceecCCCceEEeecCCCcceEEEEEEEcCcccccceEEEEeccccccc
Confidence 23778888876321 12232233322 1222222 24555 7899998887765 57889999997654
Q ss_pred -CceEEEEEECCccccCCCCcEEEEE--EEeeccCCCeEEEccCCcceeeccccccCCcCCCccccccceEEeccceEEE
Q 002366 625 -EHAEVEYTIGPIPTEDSVGKEVISR--MTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFI 701 (930)
Q Consensus 625 -~~ie~e~~v~~i~~~d~~~~e~~~r--f~t~i~s~~~fyTDsng~~~i~R~~~~~~~w~~~~~~pv~~nyYP~~s~~~I 701 (930)
+.+.|.++|+ |.+...+++ |+.+|.|+.+.| ..+||..||+++++++|+-+.+|.+.+. +|+.
T Consensus 831 ~~~V~f~teV~------Whe~~KFLKVEFPv~irs~fAsY--EtQFGitkRPTHYNTSWDvAkFEVchhk------faDy 896 (1078)
T KOG4342|consen 831 LPYVRFHTEVH------WHEAHKFLKVEFPVRIRSSFASY--ETQFGITKRPTHYNTSWDVAKFEVCHHK------FADY 896 (1078)
T ss_pred CCceeeEEEEe------ehhcCceEEeeccccccccchhh--hhhcccccCCccccccchhhHhHHHHhh------hhhh
Confidence 6799999997 776666655 888998876656 5999999999999999999999999866 8999
Q ss_pred EeCCcceEEEeccccccccccCceEEEEEEeeccCCCCCCcccccccccccccCCCCeeEeeeEEEe--ecccCcccc-c
Q 002366 702 TDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYYLS--VNQLGAGAR-W 778 (930)
Q Consensus 702 ~D~~~~ltvl~dr~~G~ss~~~G~ielmL~Rr~~~dD~rGv~e~l~e~~~~~~~~~gl~~~~~~~l~--~~~~~~~~~-~ 778 (930)
+|-..|++|||||+||. |.+.+-|+|.|+|++-.+|.-. | .|+|.+. +.++..+.. -
T Consensus 897 Se~~~Gvs~LNDCKYGf-SthGnlmrLSLLRsPKaPDAhA------D-------------mG~Hei~YA~yPH~g~lds~ 956 (1078)
T KOG4342|consen 897 SEHGFGVSLLNDCKYGF-STHGNLMRLSLLRSPKAPDAHA------D-------------MGRHEITYALYPHKGSLDSG 956 (1078)
T ss_pred hhcccceeeeccccccc-ccccceeeehhhcCCCCCCccc------c-------------cCcceEEEEeccCCCCCchh
Confidence 99999999999999995 8999999999999999999742 3 2334333 344433321 1
Q ss_pred cccchhhhcccceeeeeccccccccccccCccccCccCCCCCCcceEEEeeecCCC----cEEEEEeeccccCCCCCcce
Q 002366 779 RRTTGQEVYSPLLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLEELDDG----SVLLRLAHLYEEGEDAEYST 854 (930)
Q Consensus 779 ~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~s~l~~~~~lp~nv~lltlk~~~~~----~~llRl~~~~~~~~~~~~s~ 854 (930)
..+++.++|+|.-+.....+. ....+|..+.. +-.+||.|-++|..+++ +++||+ ||.-... .
T Consensus 957 tv~aAh~fN~~fkl~lpa~~~-----an~d~~dafsv--sgdpnViLs~iK~aE~~~~~~SivlRv---YEslGg~---s 1023 (1078)
T KOG4342|consen 957 TVQAAHSFNFPFKLALPAPSP-----ANADSWDAFSV--SGDPNVILSTIKQAESSPQRRSIVLRV---YESLGGH---S 1023 (1078)
T ss_pred HHHHHHhcCCceeeccCCCCC-----CCCccccceee--cCCchHHHHHhhhhccCcccceEEEEe---hhhcCCc---c
Confidence 256889999998554433322 11233444431 44589999999999864 699999 8873321 1
Q ss_pred eeeeehhhhcccCccceeeecccccccchhhcccceeeecCCCCCcCCCCCCCCCCCCCceEEecCcceeEEEEEC
Q 002366 855 LAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVEGESGKTHSPVRGGPLDASTLVVELGPMEIRTFLLKF 930 (930)
Q Consensus 855 ~~~v~l~~lf~~~~i~~v~E~sLt~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~v~l~P~eIrTf~i~~ 930 (930)
.+.+.+ ++++.++..|++.+....+.++ - ..++ ..-...-|.+.|+||-||.+.+
T Consensus 1024 ~a~L~~-----sL~v~~~~kcd~LE~d~~~~lT---~---------~~~~----~a~~~~pi~lrpfeiAsf~~~l 1078 (1078)
T KOG4342|consen 1024 DAWLHL-----SLPVQEAIKCDLLERDPAGHLT---S---------GQPP----EAHLFSPISLRPFEIASFSATL 1078 (1078)
T ss_pred eEEEEE-----eeehhHhhhccchhcChHhhCc---C---------CCCc----hhhhcCCcccceeeeeeeeecC
Confidence 233443 5677788888888754322221 0 0000 0001234789999999999875
No 6
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-51 Score=502.09 Aligned_cols=683 Identities=17% Similarity=0.181 Sum_probs=468.5
Q ss_pred hhhhhhhhhccccc--------ceeehhhHHHHhhhcCCccc-----ccccceEEeccceeeecCCCCCHHHHHHHHHHH
Q 002366 12 VWRMCWTQLWKLCV--------GIQIENLCLLKWHFSIDGGL-----GKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLG 78 (930)
Q Consensus 12 ~~~~~~~~~~~~~~--------~~~~e~~~~~~w~~~~~~~L-----V~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G 78 (930)
+||-|.+.++..+. ..-.|++.+|.|++++.|+| |+.|+|+.+||+||++|+++++||+++||+.+|
T Consensus 219 t~r~a~ts~~~~~~l~D~~p~~~~~~s~~~~y~~l~~d~p~l~~~~~v~~~~~~~~~g~~ve~d~n~~sGEslsrq~~~g 298 (943)
T COG0383 219 TERKASTSFSLVMNLMDHYPVQKFVQSAAALYNWLKPDVPFLFSRPAVEFEQWEIVGGMWVEEDLNTPSGESLSRQFLYG 298 (943)
T ss_pred HHHHHhhhhhheecccccChhhhhhhhHHHHHHHhcCccHHHhhcccccccceEEeecccccccCCccccchhhhhhhcc
Confidence 56778888777555 35568999999999999975 668999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcceeecCCCCCchHHHHHHHHhcCCcEEEEeccChHhHHhhhcCCCeEEEEEcCCCCCCCcceEEeec
Q 002366 79 HHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAF 158 (930)
Q Consensus 79 ~~~l~~~FG~~p~vgW~iD~FGhs~~~P~il~~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th~~ 158 (930)
+||+.++||..+|+.|.||+||.|+++|||+. .+|++.|+++++.|++.+.++++ .|.|++.| |+++++|..
T Consensus 299 q~~~~~~f~~ssri~w~pd~fg~s~~Lpqil~-p~gi~~f~t~klawn~tn~~Ph~---~~~w~~~d----g~e~~~hds 370 (943)
T COG0383 299 QRFFTEKFGASSRIYWKPDSFGFSGQLPQILE-PLGIDVFVTTKLAWNDTNRFPHD---LLRWRWKD----GTENLAHDS 370 (943)
T ss_pred ceeeecccCccceeEeehhccccchhHHHHHH-hhcchhhhccccchhhccCCChh---Hheeeccc----ccccceeec
Confidence 99999999999999999999999999999998 99999999999999999999886 89999999 999999987
Q ss_pred CcCCCCCCCCCccccCCCCCccCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCeeEEEecCCCCCCchhHHHHHHHHHHH
Q 002366 159 PVHYSPPSGFHFELTDDFDPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIH 238 (930)
Q Consensus 159 ~~~Y~~p~~f~f~~~~~~~p~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~iL~~~G~Df~y~~a~~~~~~~~~li~ 238 (930)
+.+++.. . .+ . ...++... .....|+.+|.+.+.+++ ..+.+++..
T Consensus 371 ~~~~~~d------~---------------v~-----~--~~~~r~~~---~~~~~~~~~g~gd~ggg~--~~dm~~~~~- 416 (943)
T COG0383 371 ICGCSSD------P---------------VH-----R--EMEYRFEK---INQVGLYLYGYGDGGGGP--SIDMLENPE- 416 (943)
T ss_pred CCCCccc------H---------------HH-----H--HHHhhhhh---hccceeEEeeccCCCCCC--CHHHHhccc-
Confidence 6544221 0 00 0 11122111 345677778754333322 112222110
Q ss_pred HHhcCCCeEEEeCChhhHHHH----HHhcCCCCCCccCCcccccccCCCceeeeeecchhhHHHHHHHhHHHHHHHHHHH
Q 002366 239 YVNKGGRVNALYSTPSLYTEA----KNAANGPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEF 314 (930)
Q Consensus 239 ~iN~~~~~~i~~sT~~~Yf~a----~~~~~~~~p~~~gDffpy~~~~~~ywtG~yTSr~~~K~~~R~~e~~L~~ae~l~~ 314 (930)
-..+..+|.. +.......|++.|++|. ++|+|+|||....|+++|.+|..|+.+|.+.+
T Consensus 417 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ely~------E~hrg~~t~~~~~k~~~r~~e~~l~d~e~~~~ 479 (943)
T COG0383 417 -----------LPIAEGVFNTGVEKKTSTLELVPTWDGELYL------ELHRGTYTTQAKTKKLNRESEFLLEDAEGISV 479 (943)
T ss_pred -----------cccccceeeecceeeeeecccccccchhhhh------hccCceeehhhhhhhhccccccceecccccch
Confidence 1222222222 22223568999999998 79999999999999999999999999998888
Q ss_pred hhcCCC------CCCCchHHHHHHhhhcccccccCCCccchhH-HHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCCCC
Q 002366 315 LAGKKS------PGPTTSALGDALGIAQHHDAVTGTAKQHTTN-DYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKP 387 (930)
Q Consensus 315 l~~~~~------~~~~~~~l~~~l~~~QhHDaItGTs~~~V~~-dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~ 387 (930)
++...+ ....++++|+.++++|+||+++||+...|+. +....+......+..++..+++.|.+.
T Consensus 480 ~~~~~~~~~~~~~~~~~~~~w~~~l~~qfhdvlpgs~i~~vy~~~a~~~~~~~~~~~~~i~~~~~~~l~~~--------- 550 (943)
T COG0383 480 EAAIIEGDRVTYPYELLNELWKGLLLAQFHDVLPGSSIKEVYSYDALPLLEVVQKGASKIAELALKVLSSQ--------- 550 (943)
T ss_pred hhhhhccccccCchhhHHHHHHHhhhhhceeeccccceeeechhhHHHHHHhhhccchhhhhhhhhhhhhc---------
Confidence 754321 1235678999999999999999999999999 988888888888888888888777321
Q ss_pred CCCccccCCcccccCCCCCCCCCCCCcEEEEEEcCCCceeeEEEEEEEcCCcEEEEcCCCCeeeEEEEeccccccccccc
Q 002366 388 ASTFSQCPLLNISYCPPTEKGIPEGKNLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKF 467 (930)
Q Consensus 388 ~~~~~~~~~ln~s~~~~~~~~~~~~~~~~vvvfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~ 467 (930)
....+.++|++.|++. .+++.|..+..++.+.+.
T Consensus 551 -------------------------~~e~~~~~~~~~~~~~----------~~~v~d~~~~~~~~~~~~----------- 584 (943)
T COG0383 551 -------------------------CLENLFVKNTLSWNGI----------SLQVLDKTSGGIYTSQLT----------- 584 (943)
T ss_pred -------------------------cccceEEEeeccCCcc----------eEEEEEcCCCceehhhhh-----------
Confidence 1124679999999981 455666655554433211
Q ss_pred hhhhccCCCCCCCCcEEEEEEEeeCCCceEEEEEEecCCccccccccccccCCCCCCceEecCCeEEEEEECCCC-ceEE
Q 002366 468 YTEAYLGQSSKRVPRYWLLFQVTVPPLGWNTYFISRAAGKVKRRKGFFLAADSPQDKTVEVGPGNLKMSFSRTTG-QLKR 546 (930)
Q Consensus 468 ~~~~~~~~~~~~~~~~~l~f~~~vP~lG~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~v~~~~~~G-~l~s 546 (930)
...++|++|...++++...... .....++...++.++ ++| .+..
T Consensus 585 -------------------~~ed~~~~g~~~i~~~~~~~~~---------------~~~~~~~~~~~~~~~-~~gn~~~~ 629 (943)
T COG0383 585 -------------------ALEDVGDIGNEYIYSQPTKTEP---------------ETVIEEKEWKRLIIN-DTGNQLAL 629 (943)
T ss_pred -------------------hhhhcCCcccceeEeccccccc---------------cccccccchheeecc-CCCcceee
Confidence 1246888998888873322110 122334444455555 566 3332
Q ss_pred EEecCCCeeeeEEEEEEEeeccCCCCCCCceeEcCCCCCCcccCCCccEEEEeccceEEEEEEE---cceEEEEEEEeec
Q 002366 547 MYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGAQPNVVSRSVPIKIIRGPMVDEVHQQF---NSWIYQVTRLYID 623 (930)
Q Consensus 547 i~~k~~g~~~~~~~~~~~Y~~~~~~~~sgaYiF~P~~~~~~~~~~~~~i~v~~G~l~~~v~~~~---~~~i~q~irL~~~ 623 (930)
+.++. .++ +.+..+++...+ ...+.....-.+++|||+.++++.. .+.++|.++++++
T Consensus 630 ~~~~~-----------~~~----~~w~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~l~~~ 690 (943)
T COG0383 630 IEDEP-----------AYW----DAWNIDKFLEEE----LLALTALPEEAIENGPLVRTVRVSKELTESTITQKVTLYKG 690 (943)
T ss_pred eeccc-----------cee----chhcchhhhhhh----hhhhhccccchhccccceeeeeeeeeccceEEEEEEEEecC
Confidence 22211 011 122333332221 1112222222368999999999875 4678999999999
Q ss_pred CCceEEEEEECCccccCCCCcEEEEEEEeeccCCCeEEEccCCcceeeccccccCCcCCCccccccceEEeccceEEEEe
Q 002366 624 KEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITD 703 (930)
Q Consensus 624 ~~~ie~e~~v~~i~~~d~~~~e~~~rf~t~i~s~~~fyTDsng~~~i~R~~~~~~~w~~~~~~pv~~nyYP~~s~~~I~D 703 (930)
+++++|++.|++. ..+|.+.+.|+++++++.+.| +.+||.++|+++.+++|+.+.+++ |+..|++++|
T Consensus 691 s~~l~~~t~vd~q----~~~~~lrv~fp~~~~s~~a~~--d~~fg~v~Rp~~~~~~W~~a~~e~------p~~~~vdls~ 758 (943)
T COG0383 691 SPRLDFKTEVDNQ----VRDHRLRVLFPTDIASDFATA--DIPFGVVERPTHPNTSWENARFEV------PLQKFVDLSD 758 (943)
T ss_pred CceeEEEEEEEcc----ccceEEEEEecccccccceec--cccceeeccCCCCchhhhcccCcc------hhhccccccC
Confidence 9999999999832 234555555999999876544 499999999999999998876654 5778999999
Q ss_pred CCcc--eEEEeccccccccccCceEEEEEEeec-------cCCCCCCcccccccccccccCCCCeeEeeeEEEeecc--c
Q 002366 704 KKSE--FSVLVDRATGGASIKDGQVEIMLHRRM-------LADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQ--L 772 (930)
Q Consensus 704 ~~~~--ltvl~dr~~G~ss~~~G~ielmL~Rr~-------~~dD~rGv~e~l~e~~~~~~~~~gl~~~~~~~l~~~~--~ 772 (930)
..+| ++++||++||+ +.+++.|.|+|.|.. .+||+-+ | |-| .++.+|.+.+.. .
T Consensus 759 ~~~g~~vs~ln~~kYg~-~~~~~~l~lTLLrs~~~~gd~~~~P~p~A------d-------~~g-~h~~~y~ly~h~~~~ 823 (943)
T COG0383 759 GEYGVTVSLLGDCKYGI-STHGNLLALTLLRSVGELGDWGYRPDPEA------D-------CLG-EHEFTYALYPHQGSF 823 (943)
T ss_pred CccceeEeccCCcceeE-eccCCEEEEEecccccccccccccCCchh------h-------hcc-ceeEEEEEEEccccc
Confidence 9998 89999999998 569999999999999 8888632 1 112 134455444322 2
Q ss_pred CccccccccchhhhcccceeeeeccccccccccccCccccCcc-CCCCCCcceEEEeeecCCC-cEEEEEeeccccCCCC
Q 002366 773 GAGARWRRTTGQEVYSPLLLAFTQEKLETWTESHLTKSTAMES-DYSLPLNVALITLEELDDG-SVLLRLAHLYEEGEDA 850 (930)
Q Consensus 773 ~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~s~l~~-~~~lp~nv~lltlk~~~~~-~~llRl~~~~~~~~~~ 850 (930)
..... ...++.++.|........+.. .......++.... ....|+++.|.++|+.+|+ +++||+.+...... .
T Consensus 824 ~~~~~--~~~a~~~~~P~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~lsA~K~aed~~~~IlR~yn~~~~~~-~ 898 (943)
T COG0383 824 LSAPT--AVRAYELNVPVRTVQVEEDGV--EGTLEATLDLLEPLLLVGPDNLILSALKRAEDGDGLILRLYNPSGTKT-L 898 (943)
T ss_pred cccch--hhhhhhccCceEEeecccccc--cccchhccccccccccCCCcceEEEeeeecccCCceEEEEeccCCCCc-c
Confidence 11112 234555666766554222100 0001111111100 0135889999999999987 79999965433322 1
Q ss_pred CcceeeeeehhhhcccCccce-eeecccccccchhhcccceeeecCCCCCcCCCCCCCCCCCCCceEEecCcceeEEEEE
Q 002366 851 EYSTLAKVELKKMFKGKSIKQ-LKEMSLSANQEKLEMKKMTWKVEGESGKTHSPVRGGPLDASTLVVELGPMEIRTFLLK 929 (930)
Q Consensus 851 ~~s~~~~v~l~~lf~~~~i~~-v~E~sLt~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~v~l~P~eIrTf~i~ 929 (930)
.-+.+ .+.+.. ++||+|.++.. . +..+. .|+.+|.||.||++.
T Consensus 899 ---~~~~~-------~l~~~~~~~~~~llE~~~--~-----------------------~~~~~-~i~~~~~ei~t~k~~ 942 (943)
T COG0383 899 ---ALIEL-------SLPVVNAIRETNLLENEN--E-----------------------LETNS-PITPKPVEIVTLKLE 942 (943)
T ss_pred ---eeeec-------cchhhhhhhhhhhhcccc--c-----------------------cccCC-cccccceEEEEEEee
Confidence 01112 345555 88999988710 0 01111 477889999999986
Q ss_pred C
Q 002366 930 F 930 (930)
Q Consensus 930 ~ 930 (930)
.
T Consensus 943 ~ 943 (943)
T COG0383 943 L 943 (943)
T ss_pred C
Confidence 3
No 7
>PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). This domain is found at the C terminus of glycosyl hydrolases from family 38.; GO: 0015923 mannosidase activity, 0006013 mannose metabolic process; PDB: 2WYI_A 2WYH_A 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....
Probab=100.00 E-value=2.9e-44 Score=420.71 Aligned_cols=425 Identities=28% Similarity=0.449 Sum_probs=276.8
Q ss_pred EEEEEEcCCCceeeEEEEEEEcCCcEEEEcCCCCeeeEEEEeccccccccccchhhhccCCCCCCCCcEEEEEEEeeCCC
Q 002366 415 LVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQSSKRVPRYWLLFQVTVPPL 494 (930)
Q Consensus 415 ~~vvvfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vP~l 494 (930)
++|+|||||+|+|+++|+|+|+.+.+.+.|.+|++|++|+++... ....++|+|.++||||
T Consensus 1 ~~vvvfN~l~~~r~~vv~i~v~~~~~~~~~~~g~~v~~qi~~~~~-------------------~~~~~~l~f~~~vPal 61 (457)
T PF07748_consen 1 FPVVVFNPLPWPRSEVVEIPVNTPNVSVYDADGKPVPSQIIPEPY-------------------STGRYELLFVVDVPAL 61 (457)
T ss_dssp EEEEEEE-SSS-EEEEEEEEEEECEEEEECSTSHEEHCEEEEEEE-------------------EEEEEEEEEEEEE-TT
T ss_pred CEEEEEECCCCcEEEEEEEEeccCceEEEecCCcEeeEEEEeccC-------------------CCCceEEEEEeccCCc
Confidence 579999999999999999999999999999999999999998211 1245789998999999
Q ss_pred ceEEEEEEecCCccccccccccccCCCCCCceEecCCeEEEEEECCCCceEEEEecCCCeeee--EEEEEEEeeccCC--
Q 002366 495 GWNTYFISRAAGKVKRRKGFFLAADSPQDKTVEVGPGNLKMSFSRTTGQLKRMYNSRTGVDVP--IQQSFLWYGSMVD-- 570 (930)
Q Consensus 495 G~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~l~si~~k~~g~~~~--~~~~~~~Y~~~~~-- 570 (930)
||++|.|............... ...+...|||++|+|+||+.+|.|.+|+||++|+++. ..+++..|.+...
T Consensus 62 Gy~~~~i~~~~~~~~~~~~~~~----~~~~~~~leN~~~~v~~~~~tG~i~sl~dk~~g~~~~~~~~~~~~~y~~~~~~~ 137 (457)
T PF07748_consen 62 GYKTYRIVEGESSEPSNEASIA----KDSGDNVLENEFYKVTFDPNTGGIKSLYDKKTGREYVDQDGNDFYIYEDIDGDY 137 (457)
T ss_dssp EEEEEEEEECSS--TTC--CEE----ETT-TTEEETSSEEEEE-TTTSSEEEEEETTTS-EEEEEECEEEEEEEBTTSCT
T ss_pred eeEEEEeeccccccccccceee----cceeeEEEEccEEEEEEeCCCCeEEEEEEccCCeEEEeecCCceeEeccccccc
Confidence 9999999987764432100000 0113479999999999997669999999999999998 8889999976411
Q ss_pred ------CCCCCceeEcCCCCCCcccCCCccEEEEecc--ceEEEEEEEcceEEEEEEEeecCCceEEEEEECCccccCCC
Q 002366 571 ------TQSSGAYIFRPNGAQPNVVSRSVPIKIIRGP--MVDEVHQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSV 642 (930)
Q Consensus 571 ------~~~sgaYiF~P~~~~~~~~~~~~~i~v~~G~--l~~~v~~~~~~~i~q~irL~~~~~~ie~e~~v~~i~~~d~~ 642 (930)
.+.+|+|.|.|++.....+.-...+. ..+. ++.++.....+.++|+++||+++++|||++.|++.+.+ .
T Consensus 138 ~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~-~p~~~~~~~~~~~~~~~~i~~~i~L~~~~~~ie~~~~vdn~~~~--~ 214 (457)
T PF07748_consen 138 DISPLELQRSGAYLFVEDGPLRSSIRVEYKFE-LPKNLSLVKRSEQTGSSRITQTIRLYKGSPRIEFETEVDNWAED--H 214 (457)
T ss_dssp TE-SCCCGSEECCEEEEESSSEEEEEEEEEEE-EESCBECEEEESCEEEEEEEEEEEEETTESSEEEEEEEEE-TTS--C
T ss_pred cccccccccCceEEEEecCCceEEEEEEEEEe-ccCCcEEEEEEEeccceEEEEEEEEecCceEEEEEEEecccccC--C
Confidence 12466777766554211000000000 0011 12222223346789999999999999999999865321 1
Q ss_pred CcEEEEEEEeeccCCCeEEEccCCcceeec--cccccCCcCCCccccccceEEeccceEEEEeCCcceEEEecccccccc
Q 002366 643 GKEVISRMTANMVTEKVFYTDSNGRDFLKR--VRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGAS 720 (930)
Q Consensus 643 ~~e~~~rf~t~i~s~~~fyTDsng~~~i~R--~~~~~~~w~~~~~~pv~~nyYP~~s~~~I~D~~~~ltvl~dr~~G~ss 720 (930)
.++++++|+|+|.++..+|+|.+| +++| +++.+ .+.++|||||.+.++|.|.+.+|+|+||+++|+++
T Consensus 215 ~~~l~~~f~t~i~~~~~~~~~~fG--~~~r~~~~~~~--------~~~~~~~~p~~~~~~v~~~~~~l~i~~d~~~g~~~ 284 (457)
T PF07748_consen 215 RKELRVRFPTNIDSDEAFYDDQFG--FIERKRPTHPN--------TPWEANYYPVPSHAFVDDSDSRLAILNDGKYGYES 284 (457)
T ss_dssp EEEEEEEEEES-S-TCEEEEESTT--EEEEECESSTT--------TTCGGG-EEECSCCEEEECSECEEEEESS-EEEEE
T ss_pred ceeEEEEeecCCCCCCEEEECCCC--eEEecCCcccc--------CCcccccCCCcceEEEEcCCCCEEEEcCCCcceEe
Confidence 136999999999999999987655 5555 54432 55688999999999999998889999999999987
Q ss_pred cc-CceEEEEEEeeccCCCCCCcccccccccccccCCCCeeEeeeEEEeecccCccccccccchhhhcccceeeeecccc
Q 002366 721 IK-DGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQLGAGARWRRTTGQEVYSPLLLAFTQEKL 799 (930)
Q Consensus 721 ~~-~G~ielmL~Rr~~~dD~rGv~e~l~e~~~~~~~~~gl~~~~~~~l~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~ 799 (930)
+. +|+|+|||||++..||++|++ .|+|.+...........+.+..+++|++++.....
T Consensus 285 ~~~~g~l~ltL~R~~~~D~g~~~~--------------------~~~l~~~~~~~~~~~~~~~a~~l~~Pl~~~~~~~~- 343 (457)
T PF07748_consen 285 LDQDGELELTLLRRPSQDDGRGVF--------------------RYALYPHSGSWDEADVVQEAYELNQPLIVFNSSNI- 343 (457)
T ss_dssp CTTTTEEEEEEEEEBSCG-SSSEE--------------------CCEEEEEEEEEEEEECHHCHHHHTS-EEEESS--T-
T ss_pred ccCCCeEEEEEeecccccCCccEE--------------------EEEEEEeccccccccchhhhhhccCccEEeecccc-
Confidence 77 999999999999999998855 23333322211111113467799999998621111
Q ss_pred ccccccccCccccCcc-CCCCCCcce-----EEEeeecCCC-----cEEEEEeeccccCCCCC--c-cee---eeeehhh
Q 002366 800 ETWTESHLTKSTAMES-DYSLPLNVA-----LITLEELDDG-----SVLLRLAHLYEEGEDAE--Y-STL---AKVELKK 862 (930)
Q Consensus 800 ~~~~~~~~~~~s~l~~-~~~lp~nv~-----lltlk~~~~~-----~~llRl~~~~~~~~~~~--~-s~~---~~v~l~~ 862 (930)
.......++++.. ...+|++++ +.++|+.+++ .++||+.|......... . +.+ +++++.+
T Consensus 344 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sa~K~aed~~~~~~~~ilR~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (457)
T PF07748_consen 344 ---QARQLNSFSGLSLPPEESPLNIHLLNLVVSALKKAEDGSDWSDGLILRLYNPSGKETEASLDFLSKPLSGAEVNLVN 420 (457)
T ss_dssp ---TBEE--CE-TCS--SSEESTCECEEEEEEEEEEECTTTSEEETCEEEEEEESSSSTCCCTTCCTSCCTEEEEEEEES
T ss_pred ---ccccccCCCcccccccccccccCCCcccccccccccccccccCCEEEEEEecCCCccccccccCCccceeEEEEecc
Confidence 0011111222211 012455554 4555998877 69999976554433222 1 233 6777778
Q ss_pred hcccCccceeeecccccccchhhcccceeeecCCCCCcCCCCCCCCCCCCCceEEecCcceeEEE
Q 002366 863 MFKGKSIKQLKEMSLSANQEKLEMKKMTWKVEGESGKTHSPVRGGPLDASTLVVELGPMEIRTFL 927 (930)
Q Consensus 863 lf~~~~i~~v~E~sLt~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~v~l~P~eIrTf~ 927 (930)
+|....+..++|+++.+... .+...++|+|||||||+
T Consensus 421 lle~~~~~~i~e~s~~~~~~----------------------------~~~~~~~l~P~EIkT~r 457 (457)
T PF07748_consen 421 LLEEPDIEEIEETSLSDPSE----------------------------SNSVELTLKPFEIKTFR 457 (457)
T ss_dssp TTSSSCEEEEEEE-SEEEES----------------------------CGGTCSEE-TTEEEEEE
T ss_pred cccCCCccceEeeccCCCCC----------------------------CCEeEEEEeCcEEEEEC
Confidence 88777778888888544221 12246899999999996
No 8
>PF01074 Glyco_hydro_38: Glycosyl hydrolases family 38 N-terminal domain; InterPro: IPR000602 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). Lysosomal alpha-mannosidase is necessary for the catabolism of N-linked carbohydrates released during glycoprotein turnover. The enzyme catalyses the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides, and can cleave all known types of alpha-mannosidic linkages. Defects in the gene cause lysosomal alpha-mannosidosis (AM), a lysosomal storage disease characterised by the accumulation of unbranched oligo-saccharide chains.; GO: 0004559 alpha-mannosidase activity, 0005975 carbohydrate metabolic process; PDB: 2WYI_A 2WYH_A 1O7D_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....
Probab=100.00 E-value=2.2e-44 Score=392.00 Aligned_cols=218 Identities=28% Similarity=0.410 Sum_probs=170.4
Q ss_pred eeehhhHHHHhhhcCCcc-------cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCC
Q 002366 27 IQIENLCLLKWHFSIDGG-------LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPF 99 (930)
Q Consensus 27 ~~~e~~~~~~w~~~~~~~-------LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~F 99 (930)
+..|++++..||+. .|+ ||++||||||||||||+||+++++||+||||++||+|++++||+.|++||+||+|
T Consensus 45 ~~~~~~~~~~~~~~-~p~~~~~~~~lv~~Gri~~vgg~~~~~D~~l~~~Eslirql~~G~~~~~~~fg~~~~~~~~~D~F 123 (275)
T PF01074_consen 45 IDGQTAYLEDYLED-APEEFKRIKKLVKEGRIEIVGGWYVQPDENLPSGESLIRQLLYGHKYLRKEFGVRPKVAWQPDSF 123 (275)
T ss_dssp ECTBCHHHHHHHHC-SGHHHHHHHHHHHTTSEEESSSBSS-B-SSSS-HHHHHHHHHHHHHHHHHHHTG--SEEEESSSS
T ss_pred eechhHHHHHHHHh-CCHHHHHHHHHHHhceeEEeCceeeeccccCCCHHHHHHHHhhhHHHHHHhcCCCCCeEEeCCCC
Confidence 34456666555555 663 7999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHhcCCcEEEEeccChHhHHhhhcCCCeEEEEEcCCCCCCCcceEEeecCcCCCCC-CCCCccccCCCCC
Q 002366 100 GHSAVQAYLLGVELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPP-SGFHFELTDDFDP 178 (930)
Q Consensus 100 Ghs~~~P~il~~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th~~~~~Y~~p-~~f~f~~~~~~~p 178 (930)
|||+++||||+ ++||++++++|+++++++.++..+.++|+|+|+| |++||||+++.+|..| .+..
T Consensus 124 G~~~~lP~il~-~~Gi~~~v~~r~~~~~~~~~~~~~~~~F~W~g~d----Gs~ilt~~~~~~y~~~~~~~~--------- 189 (275)
T PF01074_consen 124 GHSAQLPQILK-QFGIKYFVIWRISWNDKNPFKANPQSEFYWQGPD----GSEILTHVLPNYYYGPWYGSE--------- 189 (275)
T ss_dssp SB-TCHHHHHH-TTT-SEEEESSS-HHHHHHHHHTTSSEEEEE-TT----STEEEEEE-TST-TSHHTTCC---------
T ss_pred CCchhhHHHHh-ccCcceEEEeccccccccccccCCCceEEEecCC----CcceeEEecccCCCCCCCCcc---------
Confidence 99999999998 9999999999999999999888889999999999 9999999999987653 1110
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCeeEEEecCCCCCCchhHHHHHHHHHHHHHh---c-CCCeEEEeCChh
Q 002366 179 VQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVN---K-GGRVNALYSTPS 254 (930)
Q Consensus 179 ~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~iL~~~G~Df~y~~a~~~~~~~~~li~~iN---~-~~~~~i~~sT~~ 254 (930)
. ++++.+++.+++.+..+.++++|+|+|+|. ..+..+++++++|| + ...+++++||++
T Consensus 190 -----------~-~~~~~~~~~~~~~~~~~~~~~~l~~~G~d~------~~~~~~~~~~~~i~~~~~~~~~~~i~~sT~~ 251 (275)
T PF01074_consen 190 -----------F-EDADELLEQLRKLAKKYYTNNILIPYGDDD------DGGPPDEELIEYINEWNEEYPGPKIKYSTLS 251 (275)
T ss_dssp -----------H-HHHHHHHHHHHHHHCCSSSSEEEEEEEEEH------HHHHHHHHHHHHHHHHHHHGCTEEEEE--HH
T ss_pred -----------c-ccHHHHHHHHHHHHHhcCCCceEEEeecCC------CCCCcHHHHHHHHHHhcccCCCeEEEECCHH
Confidence 0 357888999999999999999999999882 23445556666666 3 468999999999
Q ss_pred hHHHHHHhcCCCCCCc-cCCccccc
Q 002366 255 LYTEAKNAANGPWPLK-TDDYFPYA 278 (930)
Q Consensus 255 ~Yf~a~~~~~~~~p~~-~gDffpy~ 278 (930)
+||++++++ .++|++ +|||+||+
T Consensus 252 ~yf~~l~~~-~~~p~~~~~df~~Y~ 275 (275)
T PF01074_consen 252 EYFEALEKE-SELPVHYHGDFPPYA 275 (275)
T ss_dssp HHHHHHHHC---B-EE-ES-B-S-E
T ss_pred HHHHHHHhc-cCCCcccCCCCCCCC
Confidence 999999998 999999 99999985
No 9
>PF09261 Alpha-mann_mid: Alpha mannosidase, middle domain; InterPro: IPR015341 Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0008270 zinc ion binding; PDB: 1O7D_C 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A 3BUQ_A ....
Probab=99.84 E-value=4.7e-22 Score=173.01 Aligned_cols=75 Identities=36% Similarity=0.534 Sum_probs=64.2
Q ss_pred CceeeeeecchhhHHHHHHHhHHHHHHHHHHHhhcCC-C-C---CCCchHHHHHHhhhcccccccCCCccchhHHHHHHH
Q 002366 283 AYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGKK-S-P---GPTTSALGDALGIAQHHDAVTGTAKQHTTNDYAKRL 357 (930)
Q Consensus 283 ~ywtG~yTSr~~~K~~~R~~e~~L~~ae~l~~l~~~~-~-~---~~~~~~l~~~l~~~QhHDaItGTs~~~V~~dy~~rl 357 (930)
+||+|||||||.+|+++|++|++|+.||+|++++... . . ...++++|+.|+++||||+||||++++|++||.+||
T Consensus 1 e~~~G~~tSr~~~K~~~r~~e~~L~~~E~l~~~~~~~~~~~~~~~~~l~~~w~~l~~~q~HD~i~GT~~~~V~~d~~~rl 80 (80)
T PF09261_consen 1 EYWTGYYTSRPDIKQLNRRAENLLRAAEPLAALAALLGNGGDYPQEELEKAWKALLLNQFHDAITGTSIDSVYDDYLRRL 80 (80)
T ss_dssp EES-GGGCSTHHHHHHHHHHHHHHHCHHHHHHHCHHH--HSG-HHHHHHHHHHHHHCTTBTTTTTS-S-HHHHHHHHHHH
T ss_pred CCcceeeeCHHHHHHHHHHHHHHHHHHHHHHHHHhHhccCccccHHHHHHHHHHHHHhccCCCCCCcChHHHHHHHHHhC
Confidence 4899999999999999999999999999999996654 1 1 135788999999999999999999999999999986
No 10
>smart00872 Alpha-mann_mid Alpha mannosidase, middle domain. Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase PUBMED:12634058.
Probab=99.80 E-value=3.4e-20 Score=160.92 Aligned_cols=74 Identities=38% Similarity=0.477 Sum_probs=65.5
Q ss_pred ceeeeeecchhhHHHHHHHhHHHHHHHHHHHhhcCC--CC---CCCchHHHHHHhhhcccccccCCCccchhHHHHHHH
Q 002366 284 YWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGKK--SP---GPTTSALGDALGIAQHHDAVTGTAKQHTTNDYAKRL 357 (930)
Q Consensus 284 ywtG~yTSr~~~K~~~R~~e~~L~~ae~l~~l~~~~--~~---~~~~~~l~~~l~~~QhHDaItGTs~~~V~~dy~~rl 357 (930)
||+||||||+.+|+++|++|++|+.+|.+.+++... +. ...++.+|+.|+++||||+||||++++|++||..|+
T Consensus 1 ~h~G~~Tsr~~~K~~~r~~E~~L~~~e~~~~~~~~~~~~~~~~~~~l~~~wk~ll~~q~HD~i~Gt~~~~V~~d~~~r~ 79 (79)
T smart00872 1 YHRGTYTSRPYLKRLNRRLESLLRAAEELAALAALLLLGYKYPSEQLEELWKALLLNQFHDAITGTSIDEVYDDYETRL 79 (79)
T ss_pred CCCceecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHhcCcccCCccCcHHHHHHHHHhC
Confidence 799999999999999999999999999999986432 11 234788999999999999999999999999999874
No 11
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=99.19 E-value=3.4e-12 Score=157.43 Aligned_cols=282 Identities=16% Similarity=0.067 Sum_probs=192.4
Q ss_pred cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCchHHHHHHHHhcCCcEEEEeccC
Q 002366 45 LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFARID 124 (930)
Q Consensus 45 LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FGhs~~~P~il~~~~G~~~~v~~Ri~ 124 (930)
++..|++ .+|+++.+.|.+.+++|+.+|++++|..+.. .+|...++||.+|.||+..++|+++. .+|++++.|+|+.
T Consensus 75 ~~~~~~l-~ig~~~~~~~~~~~~~e~~~rn~l~~~~~~~-~~~~~~~~g~~~d~~g~~~qa~~~~~-~~~i~~~~f~r~~ 151 (943)
T COG0383 75 LIASGKL-GIGPWYTQTDTFILSGESNVRNLLIGEFDAE-RFGKAMKLGYFPDTFGNLGQAPQLYE-NAGISAVAFGRGA 151 (943)
T ss_pred HHhhcCc-cccCCCCeeEEEEeccccceeeeecchHHHH-HhhhhhccccccccchhhhhhhHHHH-hcCCchhhccccc
Confidence 5889999 6999999999999999999999999999765 67799999999999999999999998 9999999999987
Q ss_pred hHhH--H-------hhhcCCCeEEEEEcCCCCCCCcceEEeecCcCCCCCCCCCccccCCCCCccCCCCCCC-CcHHHHH
Q 002366 125 YQDR--A-------KRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLLDG-YNVEQWV 194 (930)
Q Consensus 125 ~~~k--~-------~~~~~~~~eF~W~g~d~~~~gs~i~th~~~~~Y~~p~~f~f~~~~~~~p~~~~~~~~~-~nv~~~~ 194 (930)
.... + .-....-.+..|.+++ +++++-+.++..|..+..+. ... ..++-..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~----~~~~l~il~~~~y~~g~~I~---------------~~ghahid~aW 212 (943)
T COG0383 152 ALIGFGQLVLFELLEAYGSDFSEITWSEPD----GSQVLGILLANGYSNGNEIP---------------AVGHAHIDTAW 212 (943)
T ss_pred chhhcccchhhhhhhHhcCcCcccccccCC----chhhHHHHHHHHhhcccccc---------------ccchhhHHHHH
Confidence 4210 0 1112233467788887 78888888888887664310 000 1111111
Q ss_pred HHHHHHHHHhhcccCCCeeEEEecCCCCCCchhHHHHHHHHHHHHHhcC-CCeEEEeCC----hhhHHHHHHhc-CCCCC
Q 002366 195 NDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKG-GRVNALYST----PSLYTEAKNAA-NGPWP 268 (930)
Q Consensus 195 ~~~~~~~~~~~~~~~t~~iL~~~G~Df~y~~a~~~~~~~~~li~~iN~~-~~~~i~~sT----~~~Yf~a~~~~-~~~~p 268 (930)
..-++..++.+ .+..++++.|+|.. +-+.+....+++.|.- ......|+- ...|+...... ....+
T Consensus 213 lw~l~et~r~a---~ts~~~~~~l~D~~-----p~~~~~~s~~~~y~~l~~d~p~l~~~~~v~~~~~~~~~g~~ve~d~n 284 (943)
T COG0383 213 LWPLDETERKA---STSFSLVMNLMDHY-----PVQKFVQSAAALYNWLKPDVPFLFSRPAVEFEQWEIVGGMWVEEDLN 284 (943)
T ss_pred hccHHHHHHHH---hhhhhheecccccC-----hhhhhhhhHHHHHHHhcCccHHHhhcccccccceEEeecccccccCC
Confidence 11123333333 45678899999974 3466777777777742 233333444 33444333221 13468
Q ss_pred CccCCcccccccCCCce------eeeeecchhhHHHHHHHhHHH-HHHHHHHH-------hhcCCC-CCCC--chHHHHH
Q 002366 269 LKTDDYFPYADRRNAYW------TGFFTSRPALKGYVRVLSGFY-LASRQLEF-------LAGKKS-PGPT--TSALGDA 331 (930)
Q Consensus 269 ~~~gDffpy~~~~~~yw------tG~yTSr~~~K~~~R~~e~~L-~~ae~l~~-------l~~~~~-~~~~--~~~l~~~ 331 (930)
+.+||+.. +...|= ...-+||..+|..+...+..| +-+|++.. ++.... ..+. +.-.|+.
T Consensus 285 ~~sGEsls---rq~~~gq~~~~~~f~~ssri~w~pd~fg~s~~Lpqil~p~gi~~f~t~klawn~tn~~Ph~~~~w~~~d 361 (943)
T COG0383 285 TPSGESLS---RQFLYGQRFFTEKFGASSRIYWKPDSFGFSGQLPQILEPLGIDVFVTTKLAWNDTNRFPHDLLRWRWKD 361 (943)
T ss_pred ccccchhh---hhhhccceeeecccCccceeEeehhccccchhHHHHHHhhcchhhhccccchhhccCCChhHheeeccc
Confidence 99999965 111221 233489999999999888877 45666654 322211 1122 2224788
Q ss_pred HhhhcccccccCCCccchhHHHHHHHHH
Q 002366 332 LGIAQHHDAVTGTAKQHTTNDYAKRLAI 359 (930)
Q Consensus 332 l~~~QhHDaItGTs~~~V~~dy~~rl~~ 359 (930)
+..++.||++|||+.+.|+.+...|...
T Consensus 362 g~e~~~hds~~~~~~d~v~~~~~~r~~~ 389 (943)
T COG0383 362 GTENLAHDSICGCSSDPVHREMEYRFEK 389 (943)
T ss_pred ccccceeecCCCCcccHHHHHHHhhhhh
Confidence 9999999999999999999998888765
No 12
>PF03065 Glyco_hydro_57: Glycosyl hydrolase family 57; InterPro: IPR004300 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 57 GH57 from CAZY comprises enzymes with two known activities; alpha-amylase (3.2.1.1 from EC) and 4-alpha-glucanotransferase (2.4.1 from EC).; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process; PDB: 1K1X_B 1K1W_A 1K1Y_A 3N98_A 3N8T_A 3N92_A 1UFA_A 3P0B_A.
Probab=96.88 E-value=0.0011 Score=75.41 Aligned_cols=79 Identities=18% Similarity=0.225 Sum_probs=62.4
Q ss_pred ccccccceEEeccceeeecCCCCCH-HHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCchHHHHHHHHhcCCcEEEEec
Q 002366 44 GLGKVQKYKNKNGGWCMHDEATTHY-VDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFAR 122 (930)
Q Consensus 44 ~LV~~GrlE~vgGgwv~~Dea~~~~-esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FGhs~~~P~il~~~~G~~~~v~~R 122 (930)
+|+++|++|++|++|..+=-.+-.- |++..|+..|.+.+++.||++|+..|.|- .+.+..+..+++ ++||+++++.-
T Consensus 118 ~l~~~G~iEll~~~~~h~ilpl~~~~~d~~~Qi~~~~~~~~~~FG~~P~G~W~pE-~a~~~~l~~~l~-~~Gi~~~i~d~ 195 (360)
T PF03065_consen 118 ELAERGQIELLTSPYYHPILPLLPDPEDFRAQIEMGREYFKKHFGRRPRGFWLPE-CAYSPGLEEILA-EAGIRYTILDG 195 (360)
T ss_dssp HHHHTTSEEEEEE-TT-B-GGGSSHHHHHHHHHHHHHHHHHHHHSS--SBEE-GG-G-B-TTHHHHHH-HTT--EEEEEC
T ss_pred HHHHCCCEEEEeCchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhCCCCCceECcc-cccCHHHHHHHH-HcCCEEEEECc
Confidence 3688999999999999888777777 99999999999999999999999999997 589999999997 99999999875
Q ss_pred cC
Q 002366 123 ID 124 (930)
Q Consensus 123 i~ 124 (930)
-.
T Consensus 196 ~~ 197 (360)
T PF03065_consen 196 HQ 197 (360)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 13
>TIGR03212 uraD_N-term-dom putative urate catabolism protein. This model represents a protein that is predominantly found just upstream of the UraD protein (OHCU decarboxylase) and in a number of instances as a N-terminal fusion with it. UraD itself catalyzes the last step in the catabolism of urate to allantoate. The function of this protein is presently unknown. It shows homology with the pfam01522 polysaccharide deacetylase domain family.
Probab=89.70 E-value=6.9 Score=43.05 Aligned_cols=85 Identities=13% Similarity=0.069 Sum_probs=67.5
Q ss_pred HHhhhcCCccc----ccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCchHHHHHHH
Q 002366 35 LKWHFSIDGGL----GKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLG 110 (930)
Q Consensus 35 ~~w~~~~~~~L----V~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FGhs~~~P~il~ 110 (930)
--|+-+.+|++ +++| +||.+=||...+-..-+.+...++|..+.+-|++..|..| .||.- -.+|..++.|++
T Consensus 98 ~g~~~e~~P~~v~~i~~~G-HEIg~Hg~~H~~~~~ls~~~e~~~i~~s~~~i~~~tG~~P-~G~~~--~~~s~~T~~LL~ 173 (297)
T TIGR03212 98 VAMALARNPEAVAAMKEAG-WEIASHGLRWIDYQDMDEAQEREHIAEAIRLHTEVTGERP-LGWYT--GRTSPNTRRLVA 173 (297)
T ss_pred EHHHHHHCHHHHHHHHHcC-CEEeeccccCcccccCCHHHHHHHHHHHHHHHHHHhCCCC-ceEEC--CCCChhHHHHHH
Confidence 44555677865 5667 9999999998877777889999999999998888888764 56753 357999999997
Q ss_pred Hh-cCCcEEEEeccC
Q 002366 111 VE-LGFDSVHFARID 124 (930)
Q Consensus 111 ~~-~G~~~~v~~Ri~ 124 (930)
. .||.+..-+..+
T Consensus 174 -e~~Gf~Y~sd~~~d 187 (297)
T TIGR03212 174 -EEGGFLYDADSYAD 187 (297)
T ss_pred -HhcCceEeCchhhc
Confidence 8 999988776665
No 14
>PF01522 Polysacc_deac_1: Polysaccharide deacetylase; InterPro: IPR002509 This domain is found in polysaccharide deacetylase. This family of polysaccharide deacetylases includes NodB (nodulation protein B from Rhizobium) which is a chitooligosaccharide deacetylase []. It also includes chitin deacetylase from yeast [], and endoxylanases which hydrolyses glucosidic bonds in xylan [].; GO: 0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, 0005975 carbohydrate metabolic process; PDB: 2IW0_A 2CC0_B 2VYO_A 2J13_A 2C71_A 2C79_A 1W1A_1 1W1B_1 1W17_A 1NY1_B ....
Probab=87.16 E-value=0.66 Score=43.40 Aligned_cols=70 Identities=19% Similarity=0.297 Sum_probs=55.5
Q ss_pred ccccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCC-chHHHHHHHHhcCCcE
Q 002366 44 GLGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGH-SAVQAYLLGVELGFDS 117 (930)
Q Consensus 44 ~LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FGh-s~~~P~il~~~~G~~~ 117 (930)
+++++| +||.+=||.-++-...+.+.+.+++..+.++|++.+|..|+. | .=|||. +..+-++++ ++||++
T Consensus 52 ~l~~~G-~ei~~H~~~H~~~~~~~~~~~~~ei~~~~~~l~~~~g~~~~~-f-~~P~g~~~~~~~~~l~-~~G~~y 122 (123)
T PF01522_consen 52 ELAAAG-HEIGNHGWSHPNLSTLSPEELRREIERSREILEEITGRPPKG-F-RYPFGSYDDNTLQALR-EAGYKY 122 (123)
T ss_dssp HHHHTT--EEEEE-SSSSCGGGS-HHHHHHHHHHHHHHHHHHHSSEESE-E-E-GGGEECHHHHHHHH-HTT-EE
T ss_pred hHHHHH-HHHHhcCCcccccccCCHHHHHHHHHHHHHHHHHHhCCCCcE-E-ECCCCCCCHHHHHHHH-HcCCCc
Confidence 468899 999999999999989999999999999999999999994333 4 447775 777889998 999987
No 15
>COG1543 Uncharacterized conserved protein [Function unknown]
Probab=86.49 E-value=1 Score=51.08 Aligned_cols=85 Identities=14% Similarity=0.105 Sum_probs=69.4
Q ss_pred HHhhhcCCccc-------ccccceEEeccceeeecCCCCCH-HHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCchHHH
Q 002366 35 LKWHFSIDGGL-------GKVQKYKNKNGGWCMHDEATTHY-VDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQA 106 (930)
Q Consensus 35 ~~w~~~~~~~L-------V~~GrlE~vgGgwv~~Dea~~~~-esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FGhs~~~P 106 (930)
+..|+..+++| ..+|.+|+++.+.+-.=--+-.. |++=-|+..|.+-..++||..|+--|+| --++...++
T Consensus 115 ~~~~e~~d~~ll~~f~~~~~~g~ieilts~athg~lPll~~peAi~AQi~~g~~~ye~~fg~~P~GiWlP-Ecay~pgie 193 (504)
T COG1543 115 RGYWEQYDGNLLEAFKELQRSGGIEILTSAATHGYLPLLGGPEAIEAQILTGIELYEEHFGLAPKGIWLP-ECAYAPGIE 193 (504)
T ss_pred HHHHHHhhHHHHHHHHHHHHcCCceeeeehhhheehhhcCCchhhHHHHHHHHHHHHHHhCCCCCceech-hhccccchH
Confidence 56777777764 67899999988765332222222 7888999999999999999999999999 679999999
Q ss_pred HHHHHhcCCcEEEEe
Q 002366 107 YLLGVELGFDSVHFA 121 (930)
Q Consensus 107 ~il~~~~G~~~~v~~ 121 (930)
.+|+ ..||++++.-
T Consensus 194 ~~l~-~~Gi~yf~vd 207 (504)
T COG1543 194 RILK-DAGIEYFFVD 207 (504)
T ss_pred HHHH-hcCceEEEec
Confidence 9998 9999999986
No 16
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=72.97 E-value=11 Score=38.54 Aligned_cols=70 Identities=16% Similarity=0.134 Sum_probs=57.9
Q ss_pred cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCC-CchHHHHHHHHhcCCcEE
Q 002366 45 LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFG-HSAVQAYLLGVELGFDSV 118 (930)
Q Consensus 45 LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FG-hs~~~P~il~~~~G~~~~ 118 (930)
++++| .||-+-+|.-++-..-+.+.+.+++..+.+.|++..|..|+ |--=|+| ++..+..+++ +.||..+
T Consensus 54 i~~~G-heig~Ht~~H~~~~~~~~~~~~~ei~~~~~~l~~~~g~~~~--~fr~P~G~~~~~~~~~l~-~~G~~~v 124 (191)
T TIGR02764 54 IVKDG-HEIGSHGYRHKNYTTLEDEKIKKDILRAQEIIEKLTGKKPT--LFRPPSGAFNKAVLKAAE-SLGYTVV 124 (191)
T ss_pred HHhCC-CEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHhCCCCC--EEECCCcCCCHHHHHHHH-HcCCeEE
Confidence 57788 58999999998888888999999999999999999998875 3455676 5677788887 8999844
No 17
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=72.48 E-value=9.7 Score=40.08 Aligned_cols=71 Identities=14% Similarity=0.020 Sum_probs=59.0
Q ss_pred cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCC-CchHHHHHHHHhcCCcEE
Q 002366 45 LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFG-HSAVQAYLLGVELGFDSV 118 (930)
Q Consensus 45 LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FG-hs~~~P~il~~~~G~~~~ 118 (930)
++++| .||-+-+|.-++-..-+.+.+.++|....+.|++..|..+ ..|--=|+| ++..+.++++ ++||..+
T Consensus 85 i~~~G-heIgnHt~~H~~~~~ls~~~~~~ei~~~~~~i~~~~G~~~-~~~fR~P~G~~~~~~~~~l~-~~Gy~~v 156 (224)
T TIGR02884 85 MVDEG-HIVGNHSVHHPSLTAVNDEKFKEELTGVEEEFKKVTGQKE-MKYFRPPRGVFSERTLAYTK-ELGYYTV 156 (224)
T ss_pred HHHcC-CEeeecCccCcCcccCCHHHHHHHHHHHHHHHHHHhCCCC-CCEEeCCCCCcCHHHHHHHH-HcCCcEE
Confidence 57889 5788889998888888899999999999999999888762 346667899 5778899997 9999854
No 18
>PF07481 DUF1521: Domain of Unknown Function (DUF1521); InterPro: IPR011086 This domain of unknown function is found in a limited set of Bradyrhizobium proteins. There appears to be a periodic -DG- motif in the domain.
Probab=66.09 E-value=46 Score=32.52 Aligned_cols=69 Identities=12% Similarity=0.137 Sum_probs=42.9
Q ss_pred CCceEec-CCeEEEEEECCCCceEEEEecCCCeeeeEEEEEEEeeccCCCCCCCceeEcCCCCCCcccCCCccEEE
Q 002366 523 DKTVEVG-PGNLKMSFSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGAQPNVVSRSVPIKI 597 (930)
Q Consensus 523 ~~~~~ie-N~~~~v~~~~~~G~l~si~~k~~g~~~~~~~~~~~Y~~~~~~~~sgaYiF~P~~~~~~~~~~~~~i~v 597 (930)
....+|+ ++.|+|.++..++.+. |++|++|....+--+-.+.. +++...++.|.-+. .+.+.+-.+|.|
T Consensus 7 dgkati~lgd~Y~I~~~e~ds~~~-itnk~tG~~TriwGDPHvd~---~Gdg~~~fDFk~~~--tf~L~DGTKItV 76 (171)
T PF07481_consen 7 DGKATIDLGDGYTIEANEKDSEWT-ITNKQTGETTRIWGDPHVDA---DGDGKTDFDFKGDM--TFQLDDGTKITV 76 (171)
T ss_pred CCeeEEecCCceEEEecCCcceEE-EecCCCCcEeEEeCCCcccc---CCCcccceeecCce--EEEeCCCCEEEE
Confidence 3456777 7789999997688998 99999998765433222211 13333478887432 344444445554
No 19
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=64.76 E-value=19 Score=39.10 Aligned_cols=69 Identities=20% Similarity=0.260 Sum_probs=58.2
Q ss_pred cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCC-chHHHHHHHHhcCCcE
Q 002366 45 LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGH-SAVQAYLLGVELGFDS 117 (930)
Q Consensus 45 LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FGh-s~~~P~il~~~~G~~~ 117 (930)
++++| -||-+=+|.-++-..-+.+.+.++|..+.+.|++..|..|+ |--=|+|. +..+-++++ ++||..
T Consensus 133 i~~~G-heIGnHT~sH~~l~~ls~~~~~~Ei~~~~~~i~~~~G~~p~--~fRpP~G~~n~~~~~~l~-~~G~~~ 202 (268)
T TIGR02873 133 IVEQG-HEIGNHAYNHPDMATLSKEEIYDQINQTNEIIEATIGVTPK--WFAPPSGSFNDNVVQIAA-DLQMGT 202 (268)
T ss_pred HHHCC-CEEEecCCcCCCcccCCHHHHHHHHHHHHHHHHHHhCCCCC--EEECCCCCCCHHHHHHHH-HCCCeE
Confidence 46778 47899999988888888999999999999999999999877 66668986 577788887 889864
No 20
>PRK15394 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD; Provisional
Probab=59.40 E-value=2.6e+02 Score=30.77 Aligned_cols=86 Identities=10% Similarity=-0.022 Sum_probs=63.5
Q ss_pred HhhhcCCcccc---cccceEEeccceeeec----CCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCchHHHHH
Q 002366 36 KWHFSIDGGLG---KVQKYKNKNGGWCMHD----EATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYL 108 (930)
Q Consensus 36 ~w~~~~~~~LV---~~GrlE~vgGgwv~~D----ea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FGhs~~~P~i 108 (930)
+.+.+..|++| .+. .|+-+=||.-.. ...-+.+.+.++|..+.+-|++-.|..|+ ||-+=.+-.+..+..+
T Consensus 84 ~~I~~~~P~lvr~i~~~-HEIG~Hg~~H~~wq~~~~~ls~~e~~~eI~ra~~~Le~itG~~p~-g~raPgw~~~~~tl~l 161 (296)
T PRK15394 84 KEIGKALADIIREAAKA-HEVGLHAWDHHAWQAWSGVWSRQQLIEQIARGVDALEEIIGQPVT-CSAAAGWRADQRVVEA 161 (296)
T ss_pred chHHHHCHHHHHHHHhc-CEehhcccCccchhcccccCCHHHHHHHHHHHHHHHHHHhCCCCC-EEeCCCccCCHHHHHH
Confidence 34556667653 345 998888997552 34457788999999999999988888754 5666566677888999
Q ss_pred HHHhcCCcEEEEeccC
Q 002366 109 LGVELGFDSVHFARID 124 (930)
Q Consensus 109 l~~~~G~~~~v~~Ri~ 124 (930)
+. ++||.|---.|.+
T Consensus 162 l~-e~Gf~Y~Ss~~~d 176 (296)
T PRK15394 162 KE-AFGFRYNSDCRGT 176 (296)
T ss_pred HH-HcCCeeecCCCCC
Confidence 97 9999987555554
No 21
>TIGR03006 pepcterm_polyde polysaccharide deactylase family protein, PEP-CTERM locus subfamily. Members of this protein family belong to the family of polysaccharide deacetylases (pfam01522). All are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria, and are found near the epsH homolog that is the putative exosortase gene. The highest scoring homologs below the trusted cutoff for this model are found in several species of Methanosarcina, an archaeal genus.
Probab=55.02 E-value=23 Score=38.37 Aligned_cols=83 Identities=12% Similarity=0.122 Sum_probs=62.1
Q ss_pred HhhhcCCccc----ccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCC--CCc-hHHHHH
Q 002366 36 KWHFSIDGGL----GKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPF--GHS-AVQAYL 108 (930)
Q Consensus 36 ~w~~~~~~~L----V~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~F--Ghs-~~~P~i 108 (930)
-|+.+.+|++ +++| +||.+=||.-.+-..-+.+.+..++....+.|++..|..|+ ||-.=.+ |.. .....+
T Consensus 50 g~~~e~~p~lir~i~~~G-hEIgsHg~sH~~l~~ls~ee~~~eI~~s~~~Le~itG~~~~-gfRaP~~s~~~~t~~a~~i 127 (265)
T TIGR03006 50 GWVAERYPELVRRIVAAG-HELASHGYGHERVTTQTPEAFRADIRRSKALLEDLSGQPVR-GYRAPSFSIGKKNLWALDV 127 (265)
T ss_pred ccchhhCHHHHHHHHHcC-CEeeeccccCcCchhCCHHHHHHHHHHHHHHHHHHhCCCce-EEECCCCCCCCCcHHHHHH
Confidence 4566677764 5667 79999999888777778899999999999999988888765 5654333 332 334689
Q ss_pred HHHhcCCcEEEEe
Q 002366 109 LGVELGFDSVHFA 121 (930)
Q Consensus 109 l~~~~G~~~~v~~ 121 (930)
++ +.||.+..-.
T Consensus 128 L~-e~Gy~YdsS~ 139 (265)
T TIGR03006 128 LA-EAGYRYSSSI 139 (265)
T ss_pred HH-HCCCEEEEee
Confidence 97 9999986555
No 22
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=31.37 E-value=6.3e+02 Score=31.28 Aligned_cols=146 Identities=18% Similarity=0.322 Sum_probs=90.7
Q ss_pred cccccceEEeccceeeecCC--------------------CCCHH-------HHHHHHHHHHHHHHHHcCCCCcceeecC
Q 002366 45 LGKVQKYKNKNGGWCMHDEA--------------------TTHYV-------DMIDQTTLGHHYIKQHFNKTPKAGWQID 97 (930)
Q Consensus 45 LV~~GrlE~vgGgwv~~Dea--------------------~~~~e-------siIrQl~~G~~~l~~~FG~~p~vgW~iD 97 (930)
++++|-+||-+=+|..|--. ...|| .+.+.+..+.+.|++..|..|++ -.=
T Consensus 173 M~~sGlvEIGSHT~~sH~~l~anp~g~~~pa~~~r~~~~~~~~yEs~~e~~~ri~~DL~~s~~~Ie~~tG~~p~~--Fay 250 (671)
T PRK14582 173 VARSRLVEIASHTWNSHYGIQANPQGSLLPAAVNRAYFTDHARYETAAEYRERIRLDAVKMTEYIRTKAGKNPRV--WVW 250 (671)
T ss_pred HHhCCCeEEEcCCchhccccccccccccccchhcccccccccccccHHHHHHHHHHHHHHHHHHHHHHhCCCCcE--Eec
Confidence 57789899877788655311 11232 26678999999999999998875 566
Q ss_pred CCC-CchHHHHHHHHhcCCcEEEEeccChHhHHhhhcCCCeEEEEEcCCCCCCCcceEEeecCcCCCCCCCCCccccCCC
Q 002366 98 PFG-HSAVQAYLLGVELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTDDF 176 (930)
Q Consensus 98 ~FG-hs~~~P~il~~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th~~~~~Y~~p~~f~f~~~~~~ 176 (930)
||| ++..+-.+.+ ++||+..++.+-.... .+.. |.-|+ +.
T Consensus 251 PyG~~n~~~~~iak-eaGY~~afT~~~G~~~----------------------~~~~--------~~LpR-i~------- 291 (671)
T PRK14582 251 PYGEANGIALEELK-KLGYDMAFTLESGLAN----------------------ASQL--------DSIPR-VL------- 291 (671)
T ss_pred CCCCCCHHHHHHHH-HCCCeEEEEeCCCCCC----------------------CCCc--------Cccce-EE-------
Confidence 898 5677889998 9999988886533110 0000 11111 00
Q ss_pred CCccCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCeeEEEecCCCCC-CchhHHHHHHHHHHHHHhcCC
Q 002366 177 DPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQY-QYAESWFKQMDKLIHYVNKGG 244 (930)
Q Consensus 177 ~p~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~iL~~~G~Df~y-~~a~~~~~~~~~li~~iN~~~ 244 (930)
+..++ . .+.|...+.... .....+++-.+-|+-| .++..+-++++.+|+.+.+.+
T Consensus 292 --I~~~~-----s----l~~f~~~v~~~~--~~~~~r~~h~dld~vyd~dp~qq~~~L~~lLdrlk~~G 347 (671)
T PRK14582 292 --IANNP-----S----LKEFAQQIITVQ--EKSPQRVMHIDLDYVYDENPQQQDRNIDVLIQRVKDMQ 347 (671)
T ss_pred --ecCCC-----C----HHHHHHHHhccc--CCCCEEEEEeccccccCCCHHHHHHHHHHHHHHHHHcC
Confidence 00000 1 234444443321 2445677777778877 466778899999999988654
No 23
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=28.70 E-value=1.1e+02 Score=37.50 Aligned_cols=77 Identities=18% Similarity=0.211 Sum_probs=58.2
Q ss_pred cccccceEEeccceeeecC--------------------CCCCHHH-------HHHHHHHHHHHHHHHcCCCCcceeecC
Q 002366 45 LGKVQKYKNKNGGWCMHDE--------------------ATTHYVD-------MIDQTTLGHHYIKQHFNKTPKAGWQID 97 (930)
Q Consensus 45 LV~~GrlE~vgGgwv~~De--------------------a~~~~es-------iIrQl~~G~~~l~~~FG~~p~vgW~iD 97 (930)
++++|-+||-+=+|..+.- ....+|+ +-+.+....+.|++..|..|+. -.=
T Consensus 173 M~~sGLvEIGSHT~sHh~~~~~np~g~~~pa~~~~~y~~~~~~yEs~~~~~~rl~~Di~~s~~~Ie~~lG~~p~~--Fay 250 (672)
T PRK14581 173 MSKSGLVEIGAHTYASHYGVIANPQGNTEPAAANLQYDPKTKQYETVEAFKQRMEKDVALITQRIVQATGKQPRV--WVW 250 (672)
T ss_pred HHHCCCcEEEcCCcccccccccCccccccchhhhccccccccccccHHHHHHHHHHHHHHHHHHHHHHhCCCCCE--EEc
Confidence 5778888988888877631 2223443 5667888999999999998774 457
Q ss_pred CCC-CchHHHHHHHHhcCCcEEEEeccC
Q 002366 98 PFG-HSAVQAYLLGVELGFDSVHFARID 124 (930)
Q Consensus 98 ~FG-hs~~~P~il~~~~G~~~~v~~Ri~ 124 (930)
||| ++...-.+++ +.||+..++.+-.
T Consensus 251 PyG~yn~~~~~iak-~aGy~~afTt~~G 277 (672)
T PRK14581 251 PYGAPNGTVLNILR-QHGYQLAMTLDPG 277 (672)
T ss_pred CCCCcCHHHHHHHH-HCCCcEEEECCCC
Confidence 899 4788899998 9999998887643
No 24
>PRK10148 hypothetical protein; Provisional
Probab=28.33 E-value=19 Score=35.10 Aligned_cols=17 Identities=24% Similarity=0.167 Sum_probs=14.8
Q ss_pred CcceeecCCCCCchHHH
Q 002366 90 PKAGWQIDPFGHSAVQA 106 (930)
Q Consensus 90 p~vgW~iD~FGhs~~~P 106 (930)
++.||..|+||+++++-
T Consensus 123 ~~~g~v~D~fGi~W~l~ 139 (147)
T PRK10148 123 HGFGKVTDKFGVPWMIN 139 (147)
T ss_pred hccEEEECCCCCEEEEE
Confidence 58999999999998764
No 25
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=25.42 E-value=28 Score=28.36 Aligned_cols=15 Identities=20% Similarity=0.273 Sum_probs=11.3
Q ss_pred ccccccceEEeccce
Q 002366 44 GLGKVQKYKNKNGGW 58 (930)
Q Consensus 44 ~LV~~GrlE~vgGgw 58 (930)
++|++|+||++||-|
T Consensus 44 ~lv~e~~L~~~~G~Y 58 (60)
T PF08672_consen 44 RLVEEGKLECSGGSY 58 (60)
T ss_dssp HHHHTTSEE--TTEE
T ss_pred HHHHCCcEEecCCEE
Confidence 379999999999877
No 26
>TIGR03593 yidC_nterm membrane protein insertase, YidC/Oxa1 family, N-terminal domain. Essentially all bacteria have a member of the YidC family, whose C-terminal domain is modeled by TIGR03592. The two copies are found in endospore-forming bacteria such as Bacillus subtilis appear redundant during vegetative growth, although the member designated spoIIIJ (stage III sporulation protein J) has a distinct role in spore formation. YidC, its mitochondrial homolog Oxa1, and its chloroplast homolog direct insertion into the bacterial/organellar inner (or only) membrane. This model describes an N-terminal sequence region, including a large periplasmic domain lacking in YidC members from Gram-positive species. The multifunctional YidC protein acts both with and independently of the Sec system.
Probab=24.00 E-value=6.2e+02 Score=28.57 Aligned_cols=28 Identities=21% Similarity=0.323 Sum_probs=23.8
Q ss_pred CceEecCCeEEEEEECCCCceEEEEecC
Q 002366 524 KTVEVGPGNLKMSFSRTTGQLKRMYNSR 551 (930)
Q Consensus 524 ~~~~ieN~~~~v~~~~~~G~l~si~~k~ 551 (930)
..++|+|+.++++|+...|.|.++.-|+
T Consensus 74 ~~i~v~td~~~~~is~~Gg~i~~~~Lk~ 101 (366)
T TIGR03593 74 KRITVKTDVLRASISTKGGDIDSLELKK 101 (366)
T ss_pred CeEEEECCeEEEEEeCCCceeeeecccc
Confidence 4689999999999997778999887663
No 27
>COG1449 Alpha-amylase/alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=22.97 E-value=1.1e+02 Score=37.38 Aligned_cols=70 Identities=19% Similarity=0.293 Sum_probs=58.1
Q ss_pred ccccccceEEeccceee------ecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCchHHHHHHHHhcCCcE
Q 002366 44 GLGKVQKYKNKNGGWCM------HDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDS 117 (930)
Q Consensus 44 ~LV~~GrlE~vgGgwv~------~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FGhs~~~P~il~~~~G~~~ 117 (930)
++++.|+.|++.--+-- +|.. -++++++|+..+....++-||+.|+..|.+- +=.+..+..+++ .+||..
T Consensus 187 ~l~e~g~~e~~~~pyyHsl~pl~~d~g--w~~d~~~qv~~~~~~~~elfG~~p~~~~~tE-l~y~~~i~~~~~-e~G~~~ 262 (615)
T COG1449 187 ELAESGKVELTASPYYHSLIPLLADDG--WYEDFKEQVMMSRELYKELFGVWPSGFWNTE-LAYNDQILEYFE-ESGFSW 262 (615)
T ss_pred HHHhcCceEEEecccccccchhcccCC--chHHHHHHHHHHHHHHHHHhCCCCccccChh-hhccHHHHHHHH-HcCCcc
Confidence 47889999998876533 2333 4679999999999999999999999999874 567888999997 999995
No 28
>PRK12465 xylose isomerase; Provisional
Probab=21.62 E-value=1.4e+02 Score=34.20 Aligned_cols=64 Identities=9% Similarity=0.128 Sum_probs=44.0
Q ss_pred cHHHHHHHHHHHHHHhhccc--CCCeeEEEecCCCCCCchhHHHHHHHHHHHHHhc---CCCeEEEeCChhhHH
Q 002366 189 NVEQWVNDFIDAALTQANVT--RDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNK---GGRVNALYSTPSLYT 257 (930)
Q Consensus 189 nv~~~~~~~~~~~~~~~~~~--~t~~iL~~~G~Df~y~~a~~~~~~~~~li~~iN~---~~~~~i~~sT~~~Yf 257 (930)
..+.|++...+-+.+....| =++.=++|.|.+.+ +..+|++++++++.+ ...+++.+.|+.-|.
T Consensus 86 ~Ak~k~daaFEf~~kLG~~~~~FHD~D~~Peg~s~~-----E~~~nld~iv~~~k~~~~~tGikllw~TaNlFs 154 (445)
T PRK12465 86 RAEAKSDAAFEFFTKLGVPYYCFHDIDLAPDADDIG-----EYESNLKHMVGIAKQRQADTGIKLLWGTANLFS 154 (445)
T ss_pred HHHHHHHHHHHHHHHhCCCeeeccccccCCCCCCHH-----HHHHHHHHHHHHHHHHhhhhCceeeeecccccc
Confidence 45567777777777766444 23556778887653 667789988888874 356888888877664
Done!