Query 002366
Match_columns 930
No_of_seqs 231 out of 1182
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 23:25:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002366.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002366hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bvx_A Alpha-mannosidase 2; fa 100.0 1E-150 4E-155 1413.3 82.5 840 26-930 126-1043(1045)
2 2wyh_A Alpha-mannosidase; hydr 100.0 1E-112 4E-117 1064.7 70.0 754 28-930 73-922 (923)
3 3lvt_A Glycosyl hydrolase, fam 100.0 3E-107 1E-111 1007.8 69.3 767 9-929 29-898 (899)
4 1o7d_D Lysosomal alpha-mannosi 100.0 1.3E-61 4.3E-66 512.2 28.9 268 525-798 2-273 (282)
5 1o7d_A Lysosomal alpha-mannosi 100.0 1.7E-56 5.9E-61 483.2 24.0 220 27-247 68-297 (298)
6 1o7d_C Lysosomal alpha-mannosi 100.0 4.7E-30 1.6E-34 254.0 17.3 150 324-506 2-151 (159)
7 1o7d_E Lysosomal alpha-mannosi 99.9 7.1E-25 2.4E-29 204.4 9.7 115 809-930 4-120 (126)
8 1o7d_B Lysosomal alpha-mannosi 99.9 1.5E-23 5E-28 178.9 7.5 74 245-318 2-75 (84)
9 1k1x_A 4-alpha-glucanotransfer 99.4 6.4E-12 2.2E-16 149.7 18.8 109 12-124 26-148 (659)
10 3n98_A Alpha-amylase, GH57 fam 97.4 9.4E-05 3.2E-09 85.0 5.7 76 45-122 130-221 (562)
11 3p0b_A TT1467 protein; glycosi 97.4 9.6E-05 3.3E-09 84.5 5.5 76 45-122 151-244 (540)
12 2b5d_X Alpha-amylase; (beta/al 96.3 0.0026 8.9E-08 73.8 5.4 77 44-122 130-208 (528)
13 3cl6_A PUUE allantoinase; URIC 88.2 6.3 0.00021 42.1 14.6 75 45-124 116-191 (308)
14 3s6o_A Polysaccharide deacetyl 86.8 21 0.00073 38.2 17.8 187 45-263 121-308 (321)
15 3rxz_A Polysaccharide deacetyl 84.5 6.6 0.00022 41.7 12.3 198 45-277 97-298 (300)
16 2cc0_A Acetyl-xylan esterase; 53.2 15 0.00051 36.1 5.4 69 45-117 52-121 (195)
17 2y8u_A Chitin deacetylase; hyd 49.7 18 0.00061 36.7 5.4 70 45-118 80-150 (230)
18 2iw0_A Chitin deacetylase; hyd 49.6 14 0.00048 38.1 4.7 70 45-118 94-164 (254)
19 3vus_A Poly-beta-1,6-N-acetyl- 43.4 39 0.0013 35.0 7.0 77 45-124 132-236 (268)
20 3qbu_A Putative uncharacterize 40.9 32 0.0011 36.8 6.0 76 45-123 109-184 (326)
21 2j13_A Polysaccharide deacetyl 37.8 26 0.0009 35.8 4.5 71 45-118 103-174 (247)
22 1u69_A Hypothetical protein; s 35.8 7.2 0.00025 37.4 -0.2 16 89-104 104-119 (163)
23 2vyo_A ECU11_0510, chitooligos 33.4 44 0.0015 34.3 5.3 69 45-117 76-149 (254)
24 1ny1_A Probable polysaccharide 27.0 45 0.0015 33.9 4.0 70 45-118 91-162 (240)
25 3p0b_A TT1467 protein; glycosi 21.0 3.6E+02 0.012 30.8 10.2 136 192-347 347-492 (540)
No 1
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ...
Probab=100.00 E-value=1.2e-150 Score=1413.31 Aligned_cols=840 Identities=25% Similarity=0.400 Sum_probs=700.0
Q ss_pred ceeehhhHHHHhhhcCCcc-------cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCC
Q 002366 26 GIQIENLCLLKWHFSIDGG-------LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDP 98 (930)
Q Consensus 26 ~~~~e~~~~~~w~~~~~~~-------LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~ 98 (930)
=++.|+++|++||++++|+ ||++|||||+||||||+|||++||||+||||++||+|++++||+.|++||+|||
T Consensus 126 F~~~e~~~l~~w~~e~~Pe~~~~vk~lV~~Grle~~gG~Wv~~De~~~~~EslirQl~~G~~~~~~~FG~~~~~~W~pD~ 205 (1045)
T 3bvx_A 126 FIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIAP 205 (1045)
T ss_dssp EEECCHHHHHHHHHHSCHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCS
T ss_pred EEEecHHHHHHHHHHCCHHHHHHHHHHHhCCCEEEECCccccccccCCCHHHHHHHHHHHHHHHHHHhCCCCceEEcCCC
Confidence 3456899999999999995 799999999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHhcCCcEEEEeccChHhHHhhhcCCCeEEEEEcCCCCCCCcceEEeecCc-CCCC-----CC-----C
Q 002366 99 FGHSAVQAYLLGVELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPV-HYSP-----PS-----G 167 (930)
Q Consensus 99 FGhs~~~P~il~~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th~~~~-~Y~~-----p~-----~ 167 (930)
||||++|||||+ +|||++++|+|++|++++.++..+.+||+|+|+++..+|++||||++|. +|+. |+ +
T Consensus 206 FG~s~~lPqil~-~~Gi~~~~~~R~~~~~~~~~~~~k~~eF~W~~~w~~~dGs~Ilt~~~p~~~Y~~~~~~gp~~~~c~~ 284 (1045)
T 3bvx_A 206 FGHSPTMPYILQ-KSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQ 284 (1045)
T ss_dssp SSBCTHHHHHHH-TTTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEECCSSCSSGGGTSSSCHHHHGG
T ss_pred CCccHHHHHHHH-HcCCCeEEEecccccccccccccCCceEEEeCCCCCCCCCeEEEEeccccccCcccccCCCcccccc
Confidence 999999999998 9999999999999999999999999999999766555699999999994 4653 32 4
Q ss_pred CCccccCC---CCCccCCC-CCCCCcHHHHHHHHHHHHHHhhcccCCCeeEEEecCCCCCCchhHH---HHHHHHHHHHH
Q 002366 168 FHFELTDD---FDPVQDNP-LLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESW---FKQMDKLIHYV 240 (930)
Q Consensus 168 f~f~~~~~---~~p~~~~~-~~~~~nv~~~~~~~~~~~~~~~~~~~t~~iL~~~G~Df~y~~a~~~---~~~~~~li~~i 240 (930)
|+|+.+.+ +|||.++| .++++|++++++.+++++++++..|+++++|+|+|+||+|+++..| |+||+++|+++
T Consensus 285 fdf~~l~~~~~~~~~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~t~~~l~~~G~d~~~~~~~~~~~~~~n~~~li~~i 364 (1045)
T 3bvx_A 285 FDFKRMGSFGLSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHI 364 (1045)
T ss_dssp GCGGGSSTTSCCCTTSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccCcccCCcccccHHHHHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchhhhHHHHHHHHHHHHHH
Confidence 66766543 68887665 5678999999999999999999999999999999999999998654 99999999999
Q ss_pred hcCC--CeEEEeCChhhHHHHHHhcC----CCCCCccCCcccccccCCCceeeeeecchhhHHHHHHHhHHHHHHHHHHH
Q 002366 241 NKGG--RVNALYSTPSLYTEAKNAAN----GPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEF 314 (930)
Q Consensus 241 N~~~--~~~i~~sT~~~Yf~a~~~~~----~~~p~~~gDffpy~~~~~~ywtG~yTSr~~~K~~~R~~e~~L~~ae~l~~ 314 (930)
|+.+ .++++|||+++||+++++.. ..||+++||||||++++++||+|||||||++|+++|++|++|++||+|++
T Consensus 365 n~~~~~~~~v~~sT~~~yf~~l~~~~~~~~~~lp~~~Ge~~~~~~~~~~yw~G~yTSr~~~K~~nR~~e~~L~~aE~l~a 444 (1045)
T 3bvx_A 365 NSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRAAEMLSA 444 (1045)
T ss_dssp HHCGGGCEEEEECCHHHHHHHHHHHHHTTSCCCCEEESCBCSCEEETTEECCGGGTSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCCCCceEEECCHHHHHHHHHhhcccccccCcccCCcccccccCCcccccceecccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9754 58999999999999998753 36999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCC---CCchHHHHHHhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCCCCC---
Q 002366 315 LAGKKSPG---PTTSALGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPA--- 388 (930)
Q Consensus 315 l~~~~~~~---~~~~~l~~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~--- 388 (930)
+|...+.. ..++.+|++|+++||||+|||||+++|++||.+||.+|.+.++.+++.+++.|+..... .+....
T Consensus 445 la~~~~~~~~~~~L~~~wk~lll~QhHD~i~Gts~~~V~~d~~~rl~~a~~~~~~l~~~al~~L~~~~~~-~~~~~~~~~ 523 (1045)
T 3bvx_A 445 WHSWDGMARIEERLEQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSI-YSPDFSFSY 523 (1045)
T ss_dssp TSCCCGGGCHHHHHHHHHHHHHHHTBTTTTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCTTT-CCCCTTSCS
T ss_pred HHHhcCCCccHHHHHHHHHHHhccccccCCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-ccccccccc
Confidence 98653221 24678999999999999999999999999999999999999999999999999843211 111111
Q ss_pred CCccccCCcccccCCCCCCCCC-CCC---cEEEEEEcCCCceeeEEEEEEEcCCcEEEEcCCCCeeeEEEEecccccccc
Q 002366 389 STFSQCPLLNISYCPPTEKGIP-EGK---NLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNL 464 (930)
Q Consensus 389 ~~~~~~~~ln~s~~~~~~~~~~-~~~---~~~vvvfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~ 464 (930)
..+..|.+++.+.|+.... +. .++ ...|+|||||+|+|+++|+|+|..+.+.|+|.+|++|++|+++.......+
T Consensus 524 ~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~vvvfN~L~~~r~~~V~v~v~~~~~~V~D~~G~~v~~Qi~~~~~~~~~~ 602 (1045)
T 3bvx_A 524 FTLDDSRWPGSGVEDSRTT-IILGEDILPSKHVVMHNTLPHWREQLVDFYVSSPFVSVTDLANNPVEAQVSPVWSWHHDT 602 (1045)
T ss_dssp EEEECSSSSCTTTCCCCCE-ECCBTTTBSEEEEEEEECSSSCEEEEEEEEESCSCEEEEETTCCEECEEEEEEEEEEEET
T ss_pred cchhhhccccccccccccc-ccccccccCCceEEEEcCCCcceeeEEEEEeccCceEEEcCCCCEEeEEEeecccccccc
Confidence 1223455566677765321 10 122 568999999999999999999999999999999999999999876432211
Q ss_pred ccchhhhccCCCCCCCCcEEEEEEEeeCCCceEEEEEEecCCccc-cccccc----------ccc-CCCCCCceEecCCe
Q 002366 465 RKFYTEAYLGQSSKRVPRYWLLFQVTVPPLGWNTYFISRAAGKVK-RRKGFF----------LAA-DSPQDKTVEVGPGN 532 (930)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~l~f~~~vP~lG~~~y~i~~~~~~~~-~~~~~~----------~~~-~~~~~~~~~ieN~~ 532 (930)
.... .........|+|+|.++||||||++|.|........ ...+.+ ... .....+...|||++
T Consensus 603 ~~~~-----~~~~~~~~~~~L~f~a~vP~lG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~leN~~ 677 (1045)
T 3bvx_A 603 LTKT-----IHPQGSTTKYRIIFKARVPPMGLATYVLTISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPREIS 677 (1045)
T ss_dssp TTTE-----EEEEEEEEEEEEEEEEEECTTEEEEEEEEECSSCCTTEEECEEEEECSSCCCCCCTTCSSCCEEECCCCEE
T ss_pred cccc-----ccccCCCCcEEEEEEeccCCceeEEEEEEecCCccccccccceeecccccccccccccccCCCceeecccc
Confidence 0000 000011245789999999999999999987654322 100001 000 00123347899999
Q ss_pred E------EEEEECCCCceEEEEecCCCeeeeEEEEEEEeeccCCCCCCCceeEcCCCCCCcccCCCccEEEEeccceEEE
Q 002366 533 L------KMSFSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGAQPNVVSRSVPIKIIRGPMVDEV 606 (930)
Q Consensus 533 ~------~v~~~~~~G~l~si~~k~~g~~~~~~~~~~~Y~~~~~~~~sgaYiF~P~~~~~~~~~~~~~i~v~~G~l~~~v 606 (930)
| +|+||+ +|.|+||+||++|+++.+.++|.+|.+..+++.||||+|+|++.+.........+.+++|||+++|
T Consensus 678 ~~~~~~~~v~fd~-~G~L~si~dk~~g~e~~~~~~f~~Y~~~~~~~~sgaY~F~P~~~~~~~~~~~~~~~v~~Gpl~~ev 756 (1045)
T 3bvx_A 678 LRVGNGPTLAFSE-QGLLKSIQLTQDSPHVPVHFKFLKYGVRSHGDRSGAYLFLPNGPASPVELGQPVVLVTKGKLESSV 756 (1045)
T ss_dssp EECTTSCEEEECT-TSCEEEEECSTTSCCEEEEEEEEEECBCSSSCCCCSSCCCBSSSCEECCCCSCCEEEEECSSCEEE
T ss_pred cccccccEEEECC-CCcEEEEEEcCCCeEEEEeeEEEEEecccCCCCCcceEecCCCCCcccccCCceEEEEeCCeEEEE
Confidence 9 999996 999999999999999999999999987645678999999998876222222467788999999999
Q ss_pred EEEEcceEEEEEEEeecCCceEEEEEECCccccCCCCcEEEEEEEeeccCCCeEEEccCCcceeeccccccCCcCCCccc
Q 002366 607 HQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNE 686 (930)
Q Consensus 607 ~~~~~~~i~q~irL~~~~~~ie~e~~v~~i~~~d~~~~e~~~rf~t~i~s~~~fyTDsng~~~i~R~~~~~~~w~~~~~~ 686 (930)
++.+ ++++|++|| ++++|||+++|+. .+..+||++++|+|+|+++..||||+|||++|+|+++.+ +
T Consensus 757 ~~~~-~~i~q~irL--~~~~ieie~~Vd~---~~~~~~el~~rf~t~i~s~~~fyTD~nG~~~ikR~~~~~--------~ 822 (1045)
T 3bvx_A 757 SVGL-PSVVHQTIM--RGGAPEIRNLVDI---GSLDNTEIVMRLETHIDSGDIFYTDLNGLQFIKRRRLDK--------L 822 (1045)
T ss_dssp EEEE-TTEEEEEEE--SSSSCEEEEEECC---TTCTTEEEEEEEEECCCCTTEEEEEETTTEEEEEECCTT--------S
T ss_pred EEEE-eeEEEEEEE--CCeeEEEEEEEec---CCCCCeEEEEEeecccCCCCeEEEecCCceeEEcCCCCC--------C
Confidence 9999 679999999 7889999999963 334589999999999999999999999999999998643 6
Q ss_pred cccceEEeccceEEEEeCCcceEEEeccccccccccCceEEEEEEeeccCCCCCCcccccccccccccCCCCeeEeeeEE
Q 002366 687 PVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYY 766 (930)
Q Consensus 687 pv~~nyYP~~s~~~I~D~~~~ltvl~dr~~G~ss~~~G~ielmL~Rr~~~dD~rGv~e~l~e~~~~~~~~~gl~~~~~~~ 766 (930)
|+++|||||+++|+|+|++.||||++||+||++|+++|+||||||||+++||+|||||+|+|+ ++++|+||
T Consensus 823 p~~~NyYPv~s~~~i~D~~~~ltvl~drs~G~sSl~~G~lElmlhRrl~~DD~rGvge~l~d~---------~~~~~~~~ 893 (1045)
T 3bvx_A 823 PLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGVLDN---------KPVLHIYR 893 (1045)
T ss_dssp CGGGGCEEESSEEEEECSSEEEEEEESSCEEEECCSTTEEEEEEEEEBCSCCSSSCCSCBCCC---------CCEEEEEE
T ss_pred CcccceEEeeeeEEEEcCCeeEEEEecCCccccccCCCeEEEEEeeeeccCCcccccccccCC---------ceeeeEEE
Confidence 789999999999999999999999999999999999999999999999999999999999985 46899999
Q ss_pred EeecccCcccc------------ccccchhhhcccceeeeeccccccccccccCccccCccCCCCCCcceEEEeeecCCC
Q 002366 767 LSVNQLGAGAR------------WRRTTGQEVYSPLLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLEELDDG 834 (930)
Q Consensus 767 l~~~~~~~~~~------------~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~s~l~~~~~lp~nv~lltlk~~~~~ 834 (930)
|++++...+.. ..|..+++|++||+++++..+. +. ....+|+++.. +|||||||+|||+++++
T Consensus 894 l~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~p~~~~~~~~~~--~~-~~~~~~~~l~~--~lP~~vhlltL~~~~~~ 968 (1045)
T 3bvx_A 894 LVLEKVNNCVRPSKLHPAGYLTSAAHKASQSLLDPLDKFIFAENE--WI-GAQGQFGGDHP--SAREDLDVSVMRRLTKS 968 (1045)
T ss_dssp EEEEECTTSCCCCTTCSEECCCHHHHHHHHHHHSCCEEEEECSSC--CT-TBCSEECTTSC--CCCTTEEEEEEEECSCT
T ss_pred EEEecccccccccccccccccCHHHHHHHHHHhCCcceeeccCcc--cc-cccccCCcccc--cCCCCEEEEEeEecCCC
Confidence 99987764331 2467788999999998875322 21 23556777754 89999999999999988
Q ss_pred c-----EEEEEeec--cccCCCCCcceeeeeehhhhcccCccceeeecccccccchhhcccceeeecCCCCCcCCCCCCC
Q 002366 835 S-----VLLRLAHL--YEEGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVEGESGKTHSPVRGG 907 (930)
Q Consensus 835 ~-----~llRl~~~--~~~~~~~~~s~~~~v~l~~lf~~~~i~~v~E~sLt~~~~~~~~~r~~w~~~~~~~~~~~~~~~~ 907 (930)
. ++||| |. |+++++.. +.+++|+|.+||.. |.+++||+|+|++.++++.
T Consensus 969 ~~~~~~~ll~L-~~~~~~~~~~~~-s~~~~~~l~~lf~~--i~~~~etsL~~~~~~~~~~-------------------- 1024 (1045)
T 3bvx_A 969 SAKTQRVGYVL-HRTNLMQCGTPE-EHTQKLDVCHLLPN--VARCERTTLTFLQNLEHLD-------------------- 1024 (1045)
T ss_dssp TCSEEEEEEEE-EECCCCCCSCCC-CCCCCCCGGGSSSS--EEEEEEECTTSCSEEEECG--------------------
T ss_pred CccCceEEEEE-eeeccccCcCcc-cCcccccHHHHhcC--cceEEEecccCCccccccC--------------------
Confidence 7 99999 65 88888765 78999999999998 9999999999998765431
Q ss_pred CCCCCCceEEecCcceeEEEEEC
Q 002366 908 PLDASTLVVELGPMEIRTFLLKF 930 (930)
Q Consensus 908 ~~~~~~~~v~l~P~eIrTf~i~~ 930 (930)
+.+.|+|+|||||||+|+|
T Consensus 1025 ----~~~~v~l~PmeirTf~i~~ 1043 (1045)
T 3bvx_A 1025 ----GMVAPEVCPMETAAYVSSH 1043 (1045)
T ss_dssp ----GGCCCCCCTTCEEEEEEEE
T ss_pred ----CCcceEEcCceeEEEEEEe
Confidence 1246899999999999985
No 2
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A*
Probab=100.00 E-value=1.2e-112 Score=1064.71 Aligned_cols=754 Identities=15% Similarity=0.141 Sum_probs=587.1
Q ss_pred eehhhHHHHhhhcCCcc-------cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCC
Q 002366 28 QIENLCLLKWHFSIDGG-------LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFG 100 (930)
Q Consensus 28 ~~e~~~~~~w~~~~~~~-------LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FG 100 (930)
++|++++++||.+++|+ ||++||||+ ||||||+|||++||||+||||++||+|+++ ||+.|++||+|||||
T Consensus 73 ~~~q~~~~~~~~~~~p~~~~~vk~lV~~Grlei-G~wYv~~D~~~~~~es~irq~~~G~~~~~~-fG~~~~~~w~pD~FG 150 (923)
T 2wyh_A 73 LDGQTIILDDYLKVRPEREPEIRQAIASGKLRI-GPFYILQDDFLTSSESNVRNMLIGKEDCDR-WGASVPLGYFPDTFG 150 (923)
T ss_dssp CTTBTHHHHHHHHHCGGGHHHHHHHHHTTSEEC-CSBSSCBCSTTSCHHHHHHHHHHHHHHHHH-HTCCCSSEEESSCSS
T ss_pred EeCCHHHHHHHHHHCHHHHHHHHHHHHcCCEEE-eeeeeccccccCCHHHHHHHHHHHHHHHHH-cCCCCceeEecCCCC
Confidence 44778888999999996 699999996 666699999999999999999999999999 999999999999999
Q ss_pred CchHHHHHHHHhcCCcEEEEeccC----hHhH---HhhhcCCCeEEEEEcCCCCCCCcceEEeecCcCCCCCCCCCcccc
Q 002366 101 HSAVQAYLLGVELGFDSVHFARID----YQDR---AKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELT 173 (930)
Q Consensus 101 hs~~~P~il~~~~G~~~~v~~Ri~----~~~k---~~~~~~~~~eF~W~g~d~~~~gs~i~th~~~~~Y~~p~~f~f~~~ 173 (930)
||++|||||+ +|||++++|+|++ |+++ ..+...+.++|+|+|+| ||+||||++|.+|+.|..+
T Consensus 151 ~s~~lPqil~-~~Gi~~~~~~R~~~~~~~n~~~~~~~~~~~~~~eF~W~g~d----Gs~Ilt~~~p~~Y~~g~~~----- 220 (923)
T 2wyh_A 151 NMGQTPQLML-KAGLQAAAFGRGIRPTGFNNQVDTSEKYSSQFSEISWQGPD----NSRILGLLFANWYSNGNEI----- 220 (923)
T ss_dssp BCTTHHHHHH-TTTCCEEEECSSCEECCSSSCCCTTCTTEESSSEEEEECTT----CCEEEEEECTTCTTTTCSC-----
T ss_pred cchHHHHHHH-HcCCCEEEEEeccccccccccccchhhccCCCceEEEECCC----CCeEEEEECCCCccCCCCC-----
Confidence 9999999998 9999999999999 8865 23445678899999998 9999999999999876322
Q ss_pred CCCCCccCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCeeEEEecCCCCCCchhHHHHHHHHHHHHHhc-CCCeEEEeCC
Q 002366 174 DDFDPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNK-GGRVNALYST 252 (930)
Q Consensus 174 ~~~~p~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~iL~~~G~Df~y~~a~~~~~~~~~li~~iN~-~~~~~i~~sT 252 (930)
..+.+|++++++.+++.++ +.++++++|+|+|+||+|. .++|+++|+++|+ .+.++++|||
T Consensus 221 ----------~~~~~~v~~~~~~~~~~~~---~~~~t~~~l~~~G~D~~~~-----~~~~~~~i~~~n~~~~~~~~~~sT 282 (923)
T 2wyh_A 221 ----------PTTEAEARLFWDKKLADAE---RFASTKHLLMMNGCDHQPV-----QLDVTKAIALANQLYPDYEFVHSC 282 (923)
T ss_dssp ----------CSSHHHHHHHHHHHHHHHH---HHCSSSEEEEEECCBTCCC-----CTTHHHHHHHHHHHCTTEEEEECC
T ss_pred ----------CCCHHHHHHHHHHHHHHHH---hcCCCCeEEEEeecCCCCc-----chhHHHHHHHHHhhCCCceEEECC
Confidence 1235677777777666554 3478999999999999763 4689999999997 5789999999
Q ss_pred hhhHHHHHHhc-CCCCCCccCCcccccccCCCce---eeeeecchhhHHHHHHHhHHH-HHHHHHHHhhcCCCC-C--CC
Q 002366 253 PSLYTEAKNAA-NGPWPLKTDDYFPYADRRNAYW---TGFFTSRPALKGYVRVLSGFY-LASRQLEFLAGKKSP-G--PT 324 (930)
Q Consensus 253 ~~~Yf~a~~~~-~~~~p~~~gDffpy~~~~~~yw---tG~yTSr~~~K~~~R~~e~~L-~~ae~l~~l~~~~~~-~--~~ 324 (930)
+++||+++++. ...||+++||||.+. +.+| +|||||||++|++||++|++| +.||+|+++|...+. . ..
T Consensus 283 ~~~yf~~l~~~~~~~lp~~~GEl~~~~---~~~W~th~G~~tSr~~~K~~nR~~E~~L~~~aE~l~~la~~~g~~yp~~~ 359 (923)
T 2wyh_A 283 FEDYLADLADDLPENLSTVQGEITSQE---TDGWYTLANTASARIYLKQANTRVSRQLENITEPLAAMAYEVTSTYPHDQ 359 (923)
T ss_dssp HHHHHHHHHHHSCSCCCEEESCBSCTT---SCSSSSCGGGGGTTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHhhccccCceecccccCcc---cccceecCCEeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHH
Confidence 99999999875 467999999998532 2345 599999999999999999999 799999998754322 2 24
Q ss_pred chHHHHHHhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCCCCCCCccccCCcccccCCC
Q 002366 325 TSALGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPASTFSQCPLLNISYCPP 404 (930)
Q Consensus 325 ~~~l~~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~ln~s~~~~ 404 (930)
++.+|++|+++||||+|||||+++|++||..||.++.+.++.+++.+++.|+..... .
T Consensus 360 L~~~Wk~ll~~Q~HD~i~Gts~~~V~~d~~~~~~~~~~~~~~l~~~al~~l~~~~~~----------------------~ 417 (923)
T 2wyh_A 360 LRYAWKTLMQNHPHDSICGCSVDSVHREMMTRFEKAYEVGHYLAKEAAKQIADAIDT----------------------R 417 (923)
T ss_dssp HHHHHHHHHTTCBHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCC----------------------T
T ss_pred HHHHHHHHhccCCCcCcCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc----------------------c
Confidence 778999999999999999999999999999999999999999999999999864310 0
Q ss_pred CCCCCCCCCcEEEEEEcCCCceeeEEEEEEEc-------------------------CCcEEEEcCCCCeee-EEEEecc
Q 002366 405 TEKGIPEGKNLVVAAYNPLGWNRTDIIRIPVN-------------------------DANLIVKDPLGNAIN-VQYVNLD 458 (930)
Q Consensus 405 ~~~~~~~~~~~~vvvfNpl~~~r~~~V~i~v~-------------------------~~~~~v~d~~g~~v~-~Qi~~~~ 458 (930)
.. .++...++|||||+|+|+++|+++|. ...+.|+|.+|++|+ +|+.+..
T Consensus 418 ~~----~~~~~~vvvfN~l~~~r~~vV~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~G~~v~~~qi~~~~ 493 (923)
T 2wyh_A 418 DF----PMDSQPFVLFNTSGHSKTSVAELSLTWKKYHFGQRFPKEVYQEAQEYLARLSQSFQIIDTSGQVRPEAEILGTS 493 (923)
T ss_dssp TS----CTTSEEEEEEECSSSCEEEEEEEEEEEEEEECTTSCHHHHHHHHHHHHHTCCSEEEEECTTCCBCTTCEEEEEE
T ss_pred cC----CCCceEEEEEcCCCceEeEEEEEEEEcccccccccccccccchhhhhhcccCCCEEEECCCCCEeccEEEEecc
Confidence 00 12446799999999999999999986 368999999999999 9998875
Q ss_pred ccccccccchhhhccCC-CCCCCCcEEEEEEEeeCCCceEEEEEEecCCccccccccccccCCC-CCCceEecCCeEEEE
Q 002366 459 NVTSNLRKFYTEAYLGQ-SSKRVPRYWLLFQVTVPPLGWNTYFISRAAGKVKRRKGFFLAADSP-QDKTVEVGPGNLKMS 536 (930)
Q Consensus 459 ~~~~~~~~~~~~~~~~~-~~~~~~~~~l~f~~~vP~lG~~~y~i~~~~~~~~~~~~~~~~~~~~-~~~~~~ieN~~~~v~ 536 (930)
. ..... +. .-+. .+.....++|.|.++||||||++|.|......... ... .. ..+...|||++++|+
T Consensus 494 ~-~~~~~---~~-~~~~~~~~~~~~~~l~f~a~vP~lG~~~~~i~~~~~~~~~---~~~---~~~~~~~~~leN~~~~v~ 562 (923)
T 2wyh_A 494 I-AFDYD---LP-KRSFREPYFAIKVRLRLPITLPAMSWKTLALKLGNETTPS---ETV---SLYDDSNQCLENGFLKVM 562 (923)
T ss_dssp E-EEEEE---CC-SSSCCEEEEEEEEEEEEEEEECTTEEEEEEEEEEC---------CC---CSEETTTTEEECSSEEEE
T ss_pred c-ccccc---cc-ccccccccceeeEEEEEEEEcCCcceEEEEEEECCCcccc---ccc---ccccCCCceEecCeEEEE
Confidence 1 10000 00 0000 00001225799999999999999999875432210 000 00 234578999999999
Q ss_pred EECCCCceEEEEecCCCeeeeEEEEEEEeeccCCCCCCCceeEcCCCCC-Ccc-cCCCccEEEE-eccceEEEEEEE---
Q 002366 537 FSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGAQ-PNV-VSRSVPIKII-RGPMVDEVHQQF--- 610 (930)
Q Consensus 537 ~~~~~G~l~si~~k~~g~~~~~~~~~~~Y~~~~~~~~sgaYiF~P~~~~-~~~-~~~~~~i~v~-~G~l~~~v~~~~--- 610 (930)
|| .+|.+ ||+||++|+++. +|.+|++. ++.||+|+|+|++.+ +.. ......++++ +||++++|++.+
T Consensus 563 ~d-~~G~l-si~dk~~gr~~~---~~~~y~d~--~d~~day~f~p~~~~~~~~~~~~~~~i~v~~~gpl~~~v~~~~~~~ 635 (923)
T 2wyh_A 563 IQ-TDGRL-TITDKQSGLIYQ---DLLRFEDC--GDIGNEYISRQPNHDQPFYADQGTIKLNIISNTAQVAELEIQQTFA 635 (923)
T ss_dssp EC-TTSCE-EEEETTTCCEEE---EESEEEEE--ECCSCSSCCCCCTTCCCEEGGGSEEEEEEEEECSSEEEEEEEEEEE
T ss_pred Ee-CCCCE-EEEECCCCeEEE---EEEEEeec--CCCCCeeEEEcCCCCceeeccCCCceEEEEEcCCCEEEEEEEEEec
Confidence 99 46998 799999999884 78899875 678999999998664 332 2234567765 499999999986
Q ss_pred --------------------------cc-----eEEEEEEEeecCCceEEEEEECCccccCCCCcEEEEEEEeeccCCCe
Q 002366 611 --------------------------NS-----WIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKV 659 (930)
Q Consensus 611 --------------------------~~-----~i~q~irL~~~~~~ie~e~~v~~i~~~d~~~~e~~~rf~t~i~s~~~ 659 (930)
++ +++|+++||+++++|||++.|++. ..+|++.++|+++|.++..
T Consensus 636 vP~~~~~~L~~~~~~~~~~~~r~~~~s~~~~~~~i~q~i~L~~~~~~ie~~~~vd~~----~~~~~l~v~fpt~i~s~~~ 711 (923)
T 2wyh_A 636 IPISADKLLQAEMEAVIDITERQARRSQEKAELTLTTLIRMEKNNPRLQFTTRFDNQ----MTNHRLRVLFPTHLKTDHH 711 (923)
T ss_dssp EESSBCTHHHHHHHTTCCGGGCCCCBCSCEEEEEEEEEEEEETTCSCEEEEEEEEEC----CCSEEEEEEEECCCCCSEE
T ss_pred CCccchhhhccccccccchhhhhhcccccccceEEEEEEEEeCCCceEEEEEEECCc----cCCEEEEEEeccccCCCCE
Confidence 13 699999999999999999999976 3589999999999999877
Q ss_pred EEEccCCcceeeccccccC-CcCCCccccccceEEeccceEEEEeCCcceEEEeccccccccc-cCceEEEEEEeec--c
Q 002366 660 FYTDSNGRDFLKRVRDYRA-DWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASI-KDGQVEIMLHRRM--L 735 (930)
Q Consensus 660 fyTDsng~~~i~R~~~~~~-~w~~~~~~pv~~nyYP~~s~~~I~D~~~~ltvl~dr~~G~ss~-~~G~ielmL~Rr~--~ 735 (930)
+| | ||||+++|+++.++ +|+. ++||||+++||+|+|++.||||+|||++|++++ .+|+|+|||+|++ +
T Consensus 712 ~~-d-~~fg~i~R~~~~~~~~w~~------a~~~~p~~~~v~l~d~~~gvavlnd~~~g~~~~~~~~~i~LtLlRs~~~l 783 (923)
T 2wyh_A 712 LA-D-SIFETVKRPNHPDATFWKN------PSNPQHQECFVSLFDGENGVTIGNYGLNEYEILPDTNTIAITLLRSVGEM 783 (923)
T ss_dssp EE-E-ETTEEEEEESSCCTTTCCC------SCCCEECSSEEEEECSSEEEEEEESSCCEEEEETTTTEEEEEEEEECSBC
T ss_pred EE-e-cCceEEEccCCCCCCCccc------ccceEeeeeEEEEECCCCcEEEEeCCccceEEecCCCeEEEEEecccccc
Confidence 66 5 99999999998877 7754 789999999999999999999999999999877 4899999999999 4
Q ss_pred CCCCCCcccccccccccccCCCCeeEeeeEEEeecccCccccc---cccchhhhcccceeeeeccccccccccccCcccc
Q 002366 736 ADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQLGAGARW---RRTTGQEVYSPLLLAFTQEKLETWTESHLTKSTA 812 (930)
Q Consensus 736 ~dD~rGv~e~l~e~~~~~~~~~gl~~~~~~~l~~~~~~~~~~~---~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~s~ 812 (930)
.| +|+ +|..|.++ +|+|.+.+.-..+...+ .++.+++++.|++++...... ......++.
T Consensus 784 g~--~G~-~p~p~a~~----------~G~h~f~yal~~~~g~~~~~~~~~a~~~~~Pl~~~~~~~~~----~~~~~~~s~ 846 (923)
T 2wyh_A 784 GD--WGY-FPTPEAQC----------LGKHSLSYSFESITKQTQFASYWRAQEGQVPVITTQTNQHE----GTLAAEYSY 846 (923)
T ss_dssp CT--TSC-CBCGGGGC----------CEEEEEEEEEEEEETTTHHHHHHHHHHTTSCCEEEECCSCC----CSBCSEEES
T ss_pred cc--CCc-ccCchhHh----------ceEEEEEEEEcccCCchhHHHHHHHHHHhCCHhheecCccc----CcCCccccc
Confidence 44 676 56555431 44555554333322222 256799999999876543211 112223444
Q ss_pred CccCCCCCCcceEEEeeecCC-CcEEEEEeeccccCCCCCcceeeeeehhhhcccCccceeeecccccccchhhccccee
Q 002366 813 MESDYSLPLNVALITLEELDD-GSVLLRLAHLYEEGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTW 891 (930)
Q Consensus 813 l~~~~~lp~nv~lltlk~~~~-~~~llRl~~~~~~~~~~~~s~~~~v~l~~lf~~~~i~~v~E~sLt~~~~~~~~~r~~w 891 (930)
+. ..|+||+|.+||+++| +.++||+.|.+... ++.+.+ .+.+..+.+|+|.+... ++
T Consensus 847 l~---~~~~~v~l~alK~aed~~~~ilRl~n~~g~~-------~~~l~~-----~~~~~~~~~~~llE~~~-~~------ 904 (923)
T 2wyh_A 847 LT---GTNDQVALTAFKRRLADNALITRSYNLSNDK-------TCDFSL-----SLPNYNAKVTNLLEKDS-KQ------ 904 (923)
T ss_dssp CB---CCCTTEEEEEEEECTTTCCEEEEEEESCSSC-------CEECCC-----BCTTEEEEEECTTCCBC-SC------
T ss_pred ee---cCCCCEEEEEEEEccCCCcEEEEEecCCCCc-------ceEEEe-----ccccceEEEeeccCccc-cc------
Confidence 43 2368999999999987 47999996654221 123332 33566899999988541 10
Q ss_pred eecCCCCCcCCCCCCCCCCCCCceEEecCcceeEEEEEC
Q 002366 892 KVEGESGKTHSPVRGGPLDASTLVVELGPMEIRTFLLKF 930 (930)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~v~l~P~eIrTf~i~~ 930 (930)
+. . ++|.|.||+||+|++
T Consensus 905 -----------------~~---~-~~l~p~ei~T~~l~~ 922 (923)
T 2wyh_A 905 -----------------ST---P-SQLGKAEILTLAWKK 922 (923)
T ss_dssp -----------------CC---C-SEECTTCEEEEEEEE
T ss_pred -----------------cc---c-ceEcCcceEEEEEEe
Confidence 00 0 589999999999873
No 3
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis}
Probab=100.00 E-value=3.4e-107 Score=1007.82 Aligned_cols=767 Identities=15% Similarity=0.156 Sum_probs=549.2
Q ss_pred hhhhhhhhhhhhccccc----c-eee-hhhHHHHhhhcCCcc-------cccccceEEeccceeeecCCCCCHHHHHHHH
Q 002366 9 RVLVWRMCWTQLWKLCV----G-IQI-ENLCLLKWHFSIDGG-------LGKVQKYKNKNGGWCMHDEATTHYVDMIDQT 75 (930)
Q Consensus 9 ~~~~~~~~~~~~~~~~~----~-~~~-e~~~~~~w~~~~~~~-------LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl 75 (930)
+..+.|++.+.+=.|.. - +++ +..++++||.+++|+ ||++|||| |||||||+|||++||||+||||
T Consensus 29 ~~~~~~~~~~~l~~l~~~p~~~f~~~~~q~~~~~~~~~~~p~~~~~vk~lv~~Gr~e-igg~~v~~D~~~~~~es~irq~ 107 (899)
T 3lvt_A 29 HMRLIELVDNVLDLIENDPEFNSFHLDGQTIILDDYLQVRPEKKEAVKKAVQAGKLK-IGPFYILQDDFLISSESNVRNM 107 (899)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCCCEECTTBTHHHHHHHHHCGGGHHHHHHHHHTTSEE-CCSBSSCCCGGGSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEcccHHHHHHHHhhCHHHHHHHHHHHHcCCEE-ECchhccccccCCCHHHHHHHH
Confidence 34555555444333332 1 333 356889999999996 69999999 8999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCcceeecCCCCCchHHHHHHHHhcCCcEEEEeccC----hHhHHh--hhcCCCeEEEEEcCCCCCC
Q 002366 76 TLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFARID----YQDRAK--RKEDKSLEVIWRGSKTFGS 149 (930)
Q Consensus 76 ~~G~~~l~~~FG~~p~vgW~iD~FGhs~~~P~il~~~~G~~~~v~~Ri~----~~~k~~--~~~~~~~eF~W~g~d~~~~ 149 (930)
++||+|+++ ||+.|++||+|||||||++|||||+ ++||++++|+|++ |+.+.. ....+.++|+|+|+|
T Consensus 108 ~~G~~~~~~-fG~~~~~~w~~D~FG~s~~lp~i~~-~~Gi~~~~~~Rg~~~~~~~~~k~~~~~~~p~~~F~W~g~d---- 181 (899)
T 3lvt_A 108 LIGHLESQK-WGAPVQLGYFPDTFGNMGQTPQMMQ-LANLPAAAFGRGVKPIGFDNQVLESDYSSQYSEMWWEGPD---- 181 (899)
T ss_dssp HHHHHHHHH-HTCCCCCEEESCCCT---THHHHHH-TTTCCEEEEC---------------------CEEEEECTT----
T ss_pred HHHHHHHHH-cCCCCceeEeCCCCCCchHHHHHHH-HcCCCeEEEecccccccccccccccccCCCCceEEEECCC----
Confidence 999999999 9999999999999999999999998 9999999999986 443211 112356799999999
Q ss_pred CcceEEeecCcCCCCCCCCCccccCCCCCccCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCeeEEEecCCCCCCchhHH
Q 002366 150 SSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESW 229 (930)
Q Consensus 150 gs~i~th~~~~~Y~~p~~f~f~~~~~~~p~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~iL~~~G~Df~y~~a~~~ 229 (930)
||+||||+++++|+.+..+ ..+.+|++.+.+.+++.++ ..++++++|+|+|+|+ .++
T Consensus 182 Gs~vlt~~~~~~Y~~g~~~---------------p~~~~~~~~~~~~~~~~~~---~~~~t~~il~~~G~D~-----~p~ 238 (899)
T 3lvt_A 182 QTKIFGLLFANWYSNGNEI---------------PSEKEAAIAFWKQKLADVE---RYASTNHLLMMNGVDH-----QPV 238 (899)
T ss_dssp SCEEEEEECCCC----CCS---------------CSSHHHHHHHHHHHHHHHH---HHCSSSEEEEEEEEC---------
T ss_pred CCeEEEEECCCcCcCccCC---------------CCcHHHHHHHHHHHHHHHH---hhcCCCeEEEeecCCC-----Cch
Confidence 9999999999999764211 1234677666666554443 4578999999999996 277
Q ss_pred HHHHHHHHHHHhc-CCCeEEEeCChhhHHHHHHhcC-CCCCCccCCcccccccCCCceeeee------ecchhhHHHHHH
Q 002366 230 FKQMDKLIHYVNK-GGRVNALYSTPSLYTEAKNAAN-GPWPLKTDDYFPYADRRNAYWTGFF------TSRPALKGYVRV 301 (930)
Q Consensus 230 ~~~~~~li~~iN~-~~~~~i~~sT~~~Yf~a~~~~~-~~~p~~~gDffpy~~~~~~ywtG~y------TSr~~~K~~~R~ 301 (930)
+++|+++|+++|+ .+.++++|||+++||+++++.. ..||+++||||+ +||+||| ||||++|++||+
T Consensus 239 ~~~l~~~i~~~n~~~p~~~~~~st~~~yf~~l~~~~~~~lp~~~GEl~~------~~~~G~yt~~~~~sSr~~~K~~nR~ 312 (899)
T 3lvt_A 239 QRDITKAIALANELFPEYEFIHSNFDDYLKAVQEELPEDLGTVTGELTS------QETDGWYTLANTSSARVYLKQWNTK 312 (899)
T ss_dssp --CHHHHHHHHHHHCSSEEEEECCHHHHHHHHHHTCC--CCEEECCC-----------------CGGGGBTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCceEEEcCHHHHHHHHHHhccccCCcccccccc------cccCceEEECCccccHHHHHHHHHH
Confidence 8999999999996 5789999999999999999876 689999999996 3455555 589999999999
Q ss_pred HhHHHH-HHHHHHHhhcCCCC-C--CCchHHHHHHhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002366 302 LSGFYL-ASRQLEFLAGKKSP-G--PTTSALGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLAS 377 (930)
Q Consensus 302 ~e~~L~-~ae~l~~l~~~~~~-~--~~~~~l~~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~ 377 (930)
+|++|+ .||+|+++|...+. . ..++++|++|+++||||+|||||+++|++||..||.++.+.++.+++.+++.|+.
T Consensus 313 ~E~~L~~~aE~l~~la~~~g~~yp~~~l~~~Wk~ll~~Q~HD~i~Gtsi~~V~~d~~~~~~~~~~~~~~l~~~al~~l~~ 392 (899)
T 3lvt_A 313 VQRQLENIAEPLAAMAYEVTGDYPHDQFDYAWKTLLQNHPHDSICGCSVDEVHRGMMTRFENANDVGHFLADEATRQLTE 392 (899)
T ss_dssp HHHHHHTTHHHHHHHHHHHHSCCCHHHHHHHHHHHHTTCSTTTTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHhccCCCCccCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999 69999999754321 2 2478899999999999999999999999999999999999999999999999986
Q ss_pred CcCCCCCCCCCCCccccCCcccccCCCCCCCCCCCCcEEEEEEcCCCceeeEEEEEEEcC--------------------
Q 002366 378 RKSGHQCTKPASTFSQCPLLNISYCPPTEKGIPEGKNLVVAAYNPLGWNRTDIIRIPVND-------------------- 437 (930)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~ln~s~~~~~~~~~~~~~~~~vvvfNpl~~~r~~~V~i~v~~-------------------- 437 (930)
... .|. . ..+...|+|||||+|+|+++|+|+|..
T Consensus 393 ~~~--------------------~~~-----~-~~~~~~v~vfN~l~~~r~~~V~v~v~~~~~~~~~~~~~~~~~~~~~~ 446 (899)
T 3lvt_A 393 AID--------------------TSV-----F-PEKAHPFVLFNTSGYQKTEVVTVEVEIERLPFYTGKPEDLYHELKQK 446 (899)
T ss_dssp TBC--------------------CTT-----S-CTTCEEEEEEECSSSCEEEEEEEEEEEEEEEGGGSCHHHHHHHHHHS
T ss_pred hcc--------------------ccc-----C-CCCCCEEEEEeCCCceeeeEEEEEEEccccccccccchhhhhhhccc
Confidence 431 000 0 024568999999999999999999864
Q ss_pred --CcEEEEcCCCCeeeEEEEeccccccc-cccchhhhccCCCCCCCCcEEEEEEE-eeCCCceEEEEEEecCCccccccc
Q 002366 438 --ANLIVKDPLGNAINVQYVNLDNVTSN-LRKFYTEAYLGQSSKRVPRYWLLFQV-TVPPLGWNTYFISRAAGKVKRRKG 513 (930)
Q Consensus 438 --~~~~v~d~~g~~v~~Qi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~f~~-~vP~lG~~~y~i~~~~~~~~~~~~ 513 (930)
+.+.|.|.+|++||+|+.+....... +..... ..+.....+.|.|.+ +||||||++|.|..........
T Consensus 447 ~~~~~~v~d~~G~~v~~qv~~~~~~~~~~l~~~~~-----~~~~~~~~~~l~f~a~~vPalGy~~~~i~~~~~~~~~~-- 519 (899)
T 3lvt_A 447 ATPDYQVIDPTGKAVASRIVKEDVRFGYDLPKDAF-----RQPYMAKYLTVELSVKEMAPFSWDSFALIQGETKAFEG-- 519 (899)
T ss_dssp CCCCEEEECSSSCEECCEEEEEEEEEEECCC----------CEEEEEEEEEEEEEEEECTTEEEEEEEEESCCCCCCS--
T ss_pred cCCceEEECCCCCEEeEEEeecccccccccccccc-----ccccccceEEEEEEecCCCCCCCEEEEEEecCcccccc--
Confidence 57899999999999999986532110 000000 000011235788877 9999999999998765432110
Q ss_pred cccccCCCCCCceEecCCeEEEEEECCCCceEEEEecCCCeeeeEEEEEEEeeccCCCCCCCceeEcCCCCC-CcccCC-
Q 002366 514 FFLAADSPQDKTVEVGPGNLKMSFSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGAQ-PNVVSR- 591 (930)
Q Consensus 514 ~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~l~si~~k~~g~~~~~~~~~~~Y~~~~~~~~sgaYiF~P~~~~-~~~~~~- 591 (930)
.+ ....+...|||++|+|+||+ +|.| +|+||++|+++. ++.+|.+. ++.||+|+|+|...+ ++....
T Consensus 520 ~~----~~~~~~~~leN~~~~v~~d~-~G~l-sl~Dk~~gre~~---~~~~~~d~--gd~g~~Y~~~p~~~d~~~~~~~~ 588 (899)
T 3lvt_A 520 SL----LAQPATNEMENEFIQVKIEN-NGSL-TIADKKTGETFS---KLLTFEDT--GDIGNEYIFFKPTEDQGITTENV 588 (899)
T ss_dssp CC----SEETTTTEEECSSEEEEECT-TSCE-EEEETTTCCEEE---EETEEEEE--ECCSBTTBCCCCTTCCCEESTTC
T ss_pred cc----cccccCcEEecCcEEEEEcC-CCcE-EEEECCCCeEEE---EEEEEecC--CCCCCceeecCCcCCceeeccCC
Confidence 00 00114578999999999994 9999 699999999874 57777754 678999999997654 443322
Q ss_pred CccEEE-EeccceEEEEEEEc----------------------------c------eEEEEEEEeecCCceEEEEEECCc
Q 002366 592 SVPIKI-IRGPMVDEVHQQFN----------------------------S------WIYQVTRLYIDKEHAEVEYTIGPI 636 (930)
Q Consensus 592 ~~~i~v-~~G~l~~~v~~~~~----------------------------~------~i~q~irL~~~~~~ie~e~~v~~i 636 (930)
...+++ ++||++++|++++. | +++|+|+||+++++|||+++||+.
T Consensus 589 ~~~v~v~e~gpl~~~v~v~~~~~~P~~~~~~~~~~~~~~~~~~~r~~~~S~~~~~~~i~q~i~L~~~~~~id~~~~Vdw~ 668 (899)
T 3lvt_A 589 TAEITNKENSPVKASYQIKQTVMLPVAADERLEEEQKAVREFRERLAQRSTTLRPFEITTMVTMIKESNQLFFETTINNQ 668 (899)
T ss_dssp CCEEEEEEECSSEEEEEEEEEEEEESSBCTHHHHHHHTTCCGGGCCCCBCSCEEEEEEEEEEEEETTCCCEEEEEEEEEC
T ss_pred CceEEEEEcCCCEEEEEEEEEEccccchhhhhcccccccccchhhhhcccccccceEEEEEEEEeCCCCEEEEEEEECCC
Confidence 256776 58999999997642 3 799999999999999999999843
Q ss_pred cccCCCCcEEEEEEEeeccCCCeEEEccCCcceeeccccccCCcCCCccccccceEEeccceEEEEeCCcceEEEecccc
Q 002366 637 PTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRAT 716 (930)
Q Consensus 637 ~~~d~~~~e~~~rf~t~i~s~~~fyTDsng~~~i~R~~~~~~~w~~~~~~pv~~nyYP~~s~~~I~D~~~~ltvl~dr~~ 716 (930)
..+|.+.+.|+++|.++.++|+ ++||+++|+++.+++|+ .+.++||+++||+|+|.++||||+|||+|
T Consensus 669 ----~~~~~Lrv~Fp~~i~s~~~~~d--~~fG~i~Rpt~~~t~We------~a~~e~~~~~~vdlsd~~~Gvavlnd~~~ 736 (899)
T 3lvt_A 669 ----IKDHRLRVLFPTGMVTETHEAD--SIYEVVTRPNQVSDTWE------NPTNPQHQQAFVNVHDQNKGVTIFNEGLN 736 (899)
T ss_dssp ----CCSEEEEEEECCSCCCSEEEEE--CSSSEEEEEC-------------CCCCCEECSSEEEEECSSCEEEEEESSCC
T ss_pred ----cCCEEEEEECCCCCCcCceEEe--ccceEEECCCCCCcccc------CCCcceeeeeEEEEecCCceEEEEeCCCc
Confidence 4467788889999999988886 89999999999888996 36789999999999999999999999999
Q ss_pred ccccccCceEEEEEEeecc-------CCCCCCcccccccccccccCCCCeeEeeeEEEeecccCccc--cccccchhhhc
Q 002366 717 GGASIKDGQVEIMLHRRML-------ADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQLGAGA--RWRRTTGQEVY 787 (930)
Q Consensus 717 G~ss~~~G~ielmL~Rr~~-------~dD~rGv~e~l~e~~~~~~~~~gl~~~~~~~l~~~~~~~~~--~~~~~~~~~l~ 787 (930)
|+++..+|+|+|||+|+.. ++|+. .+ |.| ..+.+|.|. ++.... ....+.++++|
T Consensus 737 gy~v~~d~~i~LTLlRs~g~lG~~g~~p~Pd------a~-------~~G-~h~F~yal~--ph~g~~~~~~~~~~a~~~n 800 (899)
T 3lvt_A 737 EYEVLADGTIAVTLIRCVGELGDWGYFATPE------AQ-------CQG-EYTFKYGLS--LHGKPEERFATYQQAYSAQ 800 (899)
T ss_dssp EEEECTTCCEEEEEEEECSBCCTTSCCBCGG------GG-------CCE-EEEEEEEEE--EESSGGGHHHHHHHHHHHT
T ss_pred ceeEcCCCEEEEEEecccCcccccCCcCCcc------hh-------hhC-ceEEEEEEE--ecCCCchhhHHHHHHHHhc
Confidence 9877668999999999973 33321 11 223 123333333 333211 11235789999
Q ss_pred ccceeeeeccccccccccccCccccCccCCCCCCcceEEEeeecCCC-cEEEEEeeccccCCCCCcceeeeeehhhhccc
Q 002366 788 SPLLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLEELDDG-SVLLRLAHLYEEGEDAEYSTLAKVELKKMFKG 866 (930)
Q Consensus 788 ~p~~~~~~~~~~~~~~~~~~~~~s~l~~~~~lp~nv~lltlk~~~~~-~~llRl~~~~~~~~~~~~s~~~~v~l~~lf~~ 866 (930)
.|+.++...... ......+|.+. ..++++.+.++|+++|+ .++||+ |+..+. ++++.+ .
T Consensus 801 ~pl~~~~~~~~~----~~l~~~~s~~~---~~~~~v~lsavK~aEd~~~~IlRl---ye~~g~-----~~~l~~-----~ 860 (899)
T 3lvt_A 801 IPFTAATTARHE----GKLAPNHVYLT---TAEGPIGWTAVKRQEQTNHLVVRG---FNLTAQ-----NIPCEL-----H 860 (899)
T ss_dssp SCCEEEECCSCC----CSBCSEEESEE---CCCSSEEEEEEEECTTTCCEEEEE---EECSSS-----CBCCCC-----E
T ss_pred CCcceeeccccc----CcCCCccccee---eCCCCEEEEEEEeeecCCcEEEEE---EcCCCC-----cEEEEE-----c
Confidence 999765332211 11122334443 23569999999999874 699999 554332 122322 1
Q ss_pred Cc-cceeeecccccccchhhcccceeeecCCCCCcCCCCCCCCCCCCCceEEecCcceeEEEEE
Q 002366 867 KS-IKQLKEMSLSANQEKLEMKKMTWKVEGESGKTHSPVRGGPLDASTLVVELGPMEIRTFLLK 929 (930)
Q Consensus 867 ~~-i~~v~E~sLt~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~v~l~P~eIrTf~i~ 929 (930)
+. +..+.+|+|.+.. .. + ...+.+.|+|+||+|++|+
T Consensus 861 ~~~~~~~~~~nllE~~-~~----------~---------------~~~~~~~~~pfeI~T~~~~ 898 (899)
T 3lvt_A 861 KETQPATCLTNVLEEP-LT----------P---------------AIEVDAPLRPFEIRTWRFE 898 (899)
T ss_dssp ETTEECCEEECTTSCB-CS----------S---------------CCCTTSCBCTTCEEEEEEC
T ss_pred cCcccceEEecccccc-cc----------C---------------CcceeeeEcCceEEEEEEe
Confidence 22 4678899999843 10 0 0122467999999999984
No 4
>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6
Probab=100.00 E-value=1.3e-61 Score=512.20 Aligned_cols=268 Identities=42% Similarity=0.758 Sum_probs=247.7
Q ss_pred ceEecCCeEEEEEECCCCceEEEEecCCCeeeeEEEEEEEeeccC----CCCCCCceeEcCCCCCCcccCCCccEEEEec
Q 002366 525 TVEVGPGNLKMSFSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMV----DTQSSGAYIFRPNGAQPNVVSRSVPIKIIRG 600 (930)
Q Consensus 525 ~~~ieN~~~~v~~~~~~G~l~si~~k~~g~~~~~~~~~~~Y~~~~----~~~~sgaYiF~P~~~~~~~~~~~~~i~v~~G 600 (930)
.+.|+|+++++.||+.+|.|++|+++++|.+.++.++|.+|.+.. +++.||||+|+|++.++.++.....+.+++|
T Consensus 2 ~~~i~n~~~~l~fd~~tG~L~si~~~~~g~~~~v~q~f~~Y~s~~g~~~~~~~SGAYiFrP~g~~~~~~~~~~~~~v~~G 81 (282)
T 1o7d_D 2 DLVIQNEYLRARFDPNTGLLMELENLEQNLLLPVRQAFYWYNASTGNNLSSQASGAYIFRPNQNKPLFVSHWAQTHLVKA 81 (282)
T ss_dssp CCEEECSSEEEEECTTTCSEEEEEEC---CEEECEEEEEEEEBCCCBTTBSCCCCSSCCCBSSSSCEESCSCCEEEEEEC
T ss_pred cEEEcCceEEEEECCCCCcEEEEEEcCCCeEEEEeEEEEEEecccCCCCCCCCCceEEecCCCCCCcccCCCcEEEEEEC
Confidence 468999999999998789999999999999999999999999872 2468999999999987666666677889999
Q ss_pred cceEEEEEEEcceEEEEEEEeecCCceEEEEEECCccccCCCCcEEEEEEEeeccCCCeEEEccCCcceeeccccccCCc
Q 002366 601 PMVDEVHQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADW 680 (930)
Q Consensus 601 ~l~~~v~~~~~~~i~q~irL~~~~~~ie~e~~v~~i~~~d~~~~e~~~rf~t~i~s~~~fyTDsng~~~i~R~~~~~~~w 680 (930)
||+++|++.+++|++|++|||++..++|++|.|+|||+.+..|+|+++||.|+|+|++.||||+||++|++|.+++|++|
T Consensus 82 ~lv~eV~~~~~~~~sq~~Rly~~~~~vE~e~~Vgpipi~d~~~kEiv~r~~T~i~s~~~FYTDsNG~e~~kR~~~~r~~~ 161 (282)
T 1o7d_D 82 SLVQEVHQNFSAWCSQVVRLYPRQRHLELEWTVGPIPVGDGWGKEVISRFDTALATRGLFYTDSNGREILERRRNYRPTW 161 (282)
T ss_dssp SSCEEEEEEEETTEEEEEEECTTCSSEEEEEEECCCCCTTSCCEEEEEEEECCCCCTTEEEEESTTSSEEEEETTCCSSS
T ss_pred CEEEEEEEEECCcEEEEEEEecCCceEEEEEEEccccccCCCCcEEEEEEEeeeccCCeEEECCCCceeeEEEecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccceEEeccceEEEEeCCcceEEEeccccccccccCceEEEEEEeeccCCCCCCcccccccccccccCCCCee
Q 002366 681 SLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLT 760 (930)
Q Consensus 681 ~~~~~~pv~~nyYP~~s~~~I~D~~~~ltvl~dr~~G~ss~~~G~ielmL~Rr~~~dD~rGv~e~l~e~~~~~~~~~gl~ 760 (930)
+.+.++|+++|||||+++|+|+|.+.+|+|++||++||+|+++|+||||||||+++||+|||||+|+|+ ++|++
T Consensus 162 ~~~~~~pv~gNYYPv~s~~~IqD~~~rltvl~drs~G~sSl~~G~lElMlhRRl~~DD~rGvge~l~d~------~~gl~ 235 (282)
T 1o7d_D 162 KLNQTEPVAGNYYPVNSRIYITDGNMQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDARGVGEPLNKE------GSGLW 235 (282)
T ss_dssp CCCCSCTTGGGCEEESSEEEEECSSEEEEEEESSCEEECCSSTTEEEEEEEEECSSCCSSSCCSCSCCC------GGGGS
T ss_pred ccccccCcccceeeeeeEEEEEcCCeEEEEEecccccccccCCCeEEEEEeeecccccccccccccccc------CCCeE
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 25899
Q ss_pred EeeeEEEeecccCccccccccchhhhcccceeeeeccc
Q 002366 761 VRGNYYLSVNQLGAGARWRRTTGQEVYSPLLLAFTQEK 798 (930)
Q Consensus 761 ~~~~~~l~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~ 798 (930)
++|+|||+|++...+...+|.+++++++||+++|+..+
T Consensus 236 v~g~~~l~l~~~~~~~~~~r~~~~~~~~p~~~~fs~~~ 273 (282)
T 1o7d_D 236 VRGRHLVLLDKKETAAARHRLQAEMEVLAPQVVLAQGG 273 (282)
T ss_dssp EEEEEEEEEEEHHHHHHHHHHHHHHHHSCCEEEEEEC-
T ss_pred EEEEEEEEEeCcccchhhhhHHHHhhhCchhhheecCC
Confidence 99999999999887777788899999999999997653
No 5
>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1
Probab=100.00 E-value=1.7e-56 Score=483.19 Aligned_cols=220 Identities=39% Similarity=0.752 Sum_probs=205.9
Q ss_pred eeehhhHHHHhhhcCCcc-------cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCC--CcceeecC
Q 002366 27 IQIENLCLLKWHFSIDGG-------LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKT--PKAGWQID 97 (930)
Q Consensus 27 ~~~e~~~~~~w~~~~~~~-------LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~--p~vgW~iD 97 (930)
+++|+++|++||++++|+ ||++||||||||||||+|||++|+||+||||++||+|++++||+. |++||+||
T Consensus 68 ~~~e~~~~~~w~~~~~Pe~~~~vk~lV~~Grle~vgG~wve~D~~~~~~eslirQl~~G~~~~~~~fG~~~~~~~~W~pD 147 (298)
T 1o7d_A 68 IYVEIAFFSRWWRQQTNATQKIVRELVRQGRLEFANGGWVMNDEATTHYGAIIDQMTLGLRFLEETFGSDGRPRVAWHID 147 (298)
T ss_dssp EECCHHHHHHHHHTSCHHHHHHHHHHHHTTSEEESSCSSSCBCSSSCCHHHHHHHHHHHHHHHHHHHGGGGCCSEEEESS
T ss_pred EEecchHhHHHHHhcCHHHHHHHHHHHHCCCEEEECceeeccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCceeEeCC
Confidence 446899999999999995 799999999999999999999999999999999999999999997 99999999
Q ss_pred CCCCchHHHHHHHHhcCCcEEEEeccChHhHHhhhcCCCeEEEEEcCCCCC-CCcceEEeecCcCCCCCCCCCccccCCC
Q 002366 98 PFGHSAVQAYLLGVELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFG-SSSQIFTNAFPVHYSPPSGFHFELTDDF 176 (930)
Q Consensus 98 ~FGhs~~~P~il~~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~-~gs~i~th~~~~~Y~~p~~f~f~~~~~~ 176 (930)
|||||+++|+||+ ++||++++++|++|++++.+...+.+||+|+|+++++ +|++||||++|.+|++|.+||||..+.+
T Consensus 148 ~FG~s~~lP~il~-~~Gi~~~~~~R~~~~~~~~~~~~~~~eF~W~g~~~~~~dgs~i~t~~~~~~Y~~~~g~~fd~~~~~ 226 (298)
T 1o7d_A 148 PFGHSREQASLFA-QMGFDGFFFGRLDYQDKKVRKKTLQMEQVWRASTSLKPPTADLFTSVLPNMYNPPEGLCWDMLCAD 226 (298)
T ss_dssp SSSCCHHHHHHHH-HHTCCEEEESCCCHHHHHHHHHTTCSEEEEECCSSSCTTTTEEEEEECSSTTSCCTTCCCSTTCCC
T ss_pred CCCccHHHHHHHH-HcCCCeEEEEecccccccccccCCCceEEEECCCCCCCCCCeEEEEEeCCCCCCCCCcccccccCC
Confidence 9999999999998 9999999999999999998777889999999997666 6999999999999999999999999888
Q ss_pred CCccCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCeeEEEecCCCCCCchhHHHHHHHHHHHHHhcCCCeE
Q 002366 177 DPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKGGRVN 247 (930)
Q Consensus 177 ~p~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~iL~~~G~Df~y~~a~~~~~~~~~li~~iN~~~~~~ 247 (930)
.|++++|.++++|++++++.|++++++++++|+|++||+|+|+||+|.+|..||.||++||+++|+++.++
T Consensus 227 ~p~~~~~~~~~~nv~~r~~~~~~~~~~~a~~~~t~~vl~p~G~Df~~~~a~~~f~n~~~li~~iN~~~~~~ 297 (298)
T 1o7d_A 227 KPVVEDTRSPEYNAKELVRYFLKLATDQGKLYRTKHTVMTMGSDFQYENANTWFKNLDKLIQLVNAQQRAN 297 (298)
T ss_dssp CCCCCCTTSTTCCHHHHHHHHHHHHHHHHTTSSSSEEEEEECCBTCCTTHHHHHHHHHHHHHHHHC-----
T ss_pred cCccCCccchHHHHHHHHHHHHHHHHHHHhhcCCCcEEeccCCCCCccchhHHHHHHHHHHHHHhhcCccC
Confidence 89888888999999999999999999999999999999999999999999999999999999999876554
No 6
>1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6
Probab=99.97 E-value=4.7e-30 Score=254.01 Aligned_cols=150 Identities=37% Similarity=0.646 Sum_probs=132.4
Q ss_pred CchHHHHHHhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCCCCCCCccccCCcccccCC
Q 002366 324 TTSALGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPASTFSQCPLLNISYCP 403 (930)
Q Consensus 324 ~~~~l~~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~ln~s~~~ 403 (930)
.++++|++|+++||||+||||++++|++||..||.+|++.++.+++.+++.|+... ..|..|.++|++.||
T Consensus 2 ~L~~~~k~l~~~QhHDaItGts~~~V~~Dy~~rl~~~~~~~~~l~~~~l~~L~~~~---------~~~~~~~~ln~~~~~ 72 (159)
T 1o7d_C 2 DSAPLNEAMAVLQHHDAVSGTSRQHVANDYARQLSEGWRPCEVLMSNALAHLSGLK---------EDFAFCRKLNISICP 72 (159)
T ss_dssp CSHHHHHHHHHTTBTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------SCEECCTTGGGTCCH
T ss_pred hHHHHHHHHhCcccCCcCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc---------cccccccccccccCc
Confidence 46789999999999999999999999999999999999999999999999998532 257789999999998
Q ss_pred CCCCCCCCCCcEEEEEEcCCCceeeEEEEEEEcCCcEEEEcCCCCeeeEEEEeccccccccccchhhhccCCCCCCCCcE
Q 002366 404 PTEKGIPEGKNLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQSSKRVPRY 483 (930)
Q Consensus 404 ~~~~~~~~~~~~~vvvfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (930)
.++ .++...|+|||||+|+|+++|+++|+.+.+.|+|.+|++|++|+.+.+.. ..+
T Consensus 73 ~~~----~~~~~~vvvfN~l~~~r~~~V~v~v~~~~~~v~d~~G~~v~~qi~~~~~~--------------------~~~ 128 (159)
T 1o7d_C 73 LTQ----TAERFQVIVYNPLGRKVDWMVRLPVSKHVYLVKDPGGKIVPSDVVTIPSS--------------------DSQ 128 (159)
T ss_dssp HHH----HCSEEEEEEEECSSSCEEEEEEEEECSSCEEEECSSSCEECCEEEEETTT--------------------TEE
T ss_pred ccc----CCccEEEEEECCCCceEeEEEEEEEcCCcEEEEcCCCCEeeeEEEeccCC--------------------Cce
Confidence 653 14567899999999999999999999999999999999999999987642 225
Q ss_pred EEEEEEeeCCCceEEEEEEecCC
Q 002366 484 WLLFQVTVPPLGWNTYFISRAAG 506 (930)
Q Consensus 484 ~l~f~~~vP~lG~~~y~i~~~~~ 506 (930)
+|+|.++||||||++|+|...+.
T Consensus 129 ~l~f~a~vP~lG~~ty~i~~~~~ 151 (159)
T 1o7d_C 129 ELLFSALVPAVGFSIYSVSQMPN 151 (159)
T ss_dssp EEEEEEEECTTEEEEEEEEECC-
T ss_pred EEEEEeecCCceeEEEEEEECCC
Confidence 79999999999999999987654
No 7
>1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6
Probab=99.91 E-value=7.1e-25 Score=204.45 Aligned_cols=115 Identities=30% Similarity=0.515 Sum_probs=95.1
Q ss_pred ccccCccCCCCCCcceEEEeeecCCCcEEEEEeeccccCCCC--CcceeeeeehhhhcccCccceeeecccccccchhhc
Q 002366 809 KSTAMESDYSLPLNVALITLEELDDGSVLLRLAHLYEEGEDA--EYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEM 886 (930)
Q Consensus 809 ~~s~l~~~~~lp~nv~lltlk~~~~~~~llRl~~~~~~~~~~--~~s~~~~v~l~~lf~~~~i~~v~E~sLt~~~~~~~~ 886 (930)
+|+++.. +||+||||+||++|+++++|||++|+|++++|. .+|+|++|||++||.+++|.+++||+|+||+.++++
T Consensus 4 ~~s~l~~--~LP~nvhLlTLe~~~~~~iLlRl~hl~e~~ed~~~~~s~pv~v~l~~lF~~~~i~~i~EttLtgn~~~~~~ 81 (126)
T 1o7d_E 4 QFSGLRR--ELPPSVRLLTLARWGPETLLLRLEHQFAVGEDSGRNLSSPVTLDLTNLFSAFTITNLRETTLAANQLLAYA 81 (126)
T ss_dssp EECSBSS--CCCTTCEEEEEEEEETTEEEEEEECCCCTTTTTTTTCSSCEEEECSSSBSSSEEEEEEEECTTSSSBGGGC
T ss_pred ccCcccc--cCCCcEeEEEEEEcCCCcEEEEEEeecccccCcccccCcceEEeHHHhhcccccceEEEEccccccccccc
Confidence 4666654 899999999999999999999999999999998 899999999999999999999999999999999999
Q ss_pred ccceeeecCCCCCcCCCCCCCCCCCCCceEEecCcceeEEEEEC
Q 002366 887 KKMTWKVEGESGKTHSPVRGGPLDASTLVVELGPMEIRTFLLKF 930 (930)
Q Consensus 887 ~r~~w~~~~~~~~~~~~~~~~~~~~~~~~v~l~P~eIrTf~i~~ 930 (930)
+|++|++++.+.. .+ .+.+.+.+.|+|.|||||||+|+|
T Consensus 82 ~Rl~w~~~~~~~~----~~-~~~~~~~~~vtL~PmEIRTFii~~ 120 (126)
T 1o7d_E 82 SRLQWTTDTGPTP----HP-SPSRPVSATITLQPMEIRTFLASV 120 (126)
T ss_dssp CCCCCCBC-------------------CEEEECTTCEEEEEEEE
T ss_pred cccccccCCCCcc----cc-cccCCCCceEEEcCccEEEEEEEE
Confidence 9999998764321 11 344556679999999999999975
No 8
>1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1
Probab=99.89 E-value=1.5e-23 Score=178.88 Aligned_cols=74 Identities=54% Similarity=0.906 Sum_probs=71.0
Q ss_pred CeEEEeCChhhHHHHHHhcCCCCCCccCCcccccccCCCceeeeeecchhhHHHHHHHhHHHHHHHHHHHhhcC
Q 002366 245 RVNALYSTPSLYTEAKNAANGPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGK 318 (930)
Q Consensus 245 ~~~i~~sT~~~Yf~a~~~~~~~~p~~~gDffpy~~~~~~ywtG~yTSr~~~K~~~R~~e~~L~~ae~l~~l~~~ 318 (930)
+++|+||||+|||+++++.+..||+++||||||+|++++||||||||||.+|+++|++|++|++||+|.+++..
T Consensus 2 ~v~v~ysT~s~Yf~al~~~~~~~p~~~~DFfpYad~~~~yWtGyyTSRp~lK~~~R~~~~~L~~ae~L~~la~~ 75 (84)
T 1o7d_B 2 RVNVLYSTPACYLWELNKANLSWSVKKDDFFPYADGPYMFWTGYFSSRPALKRYERLSYNFLQVCNQLEALAGP 75 (84)
T ss_dssp CEEEEECCHHHHHHHHHHTCCCBCEECSCCCSCCSBTTBCSCGGGTSCHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred eEEEEeCCHHHHHHHHHHhCCCCcccCCCcccccCCCCCcceeeeeCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 58999999999999999988899999999999999999999999999999999999999999999999999754
No 9
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=99.37 E-value=6.4e-12 Score=149.67 Aligned_cols=109 Identities=15% Similarity=0.149 Sum_probs=95.0
Q ss_pred hhhhhhhhhccccc-------ceeehhhHHHHhhhcCCcc-------cccccceEEeccceeeecCCCCCHHHHHHHHHH
Q 002366 12 VWRMCWTQLWKLCV-------GIQIENLCLLKWHFSIDGG-------LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTL 77 (930)
Q Consensus 12 ~~~~~~~~~~~~~~-------~~~~e~~~~~~w~~~~~~~-------LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~ 77 (930)
++..|+.++..+.. .+.. ++.+++|+++.+|+ |+++||+|++||+|+.+|.++++.|++++|+.+
T Consensus 26 a~~~~Y~pll~ll~~~~~~k~~~~~-s~~ll~~l~~~~p~l~~~ik~l~~~G~vE~l~~~~~Hpi~~l~p~e~~~~QI~~ 104 (659)
T 1k1x_A 26 AYNRSYRPFMEILEEFPEMKVNVHF-SGPLLEWIEENKPDYLDLLRSLIKRGQLEIVVAGFYEPVLAAIPKEDRLVQIEM 104 (659)
T ss_dssp HHHHTHHHHHHHHTTCTTCCEEEEE-CHHHHHHHHHHCHHHHHHHHHHHHTTCEEEEBCCTTCCCGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEc-cHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEccCcccccccCCCHHHHHHHHHH
Confidence 45566666655422 2223 79999999999996 588999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcceeecCCCCCchHHHHHHHHhcCCcEEEEeccC
Q 002366 78 GHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFARID 124 (930)
Q Consensus 78 G~~~l~~~FG~~p~vgW~iD~FGhs~~~P~il~~~~G~~~~v~~Ri~ 124 (930)
|.++++ .||++|+..|+||. |+++.+|+||+ ++||+++++..-+
T Consensus 105 g~~~~~-~FG~~P~G~WlPE~-~ys~~l~~iL~-~~Gi~y~~td~~~ 148 (659)
T 1k1x_A 105 LKDYAR-KLGYDAKGVWLTER-VWQPELVKSLR-EAGIEYVVVDDYH 148 (659)
T ss_dssp HHHHHH-HTTCCCCEEECGGG-CBCTTHHHHHH-HTTCCEEEEEHHH
T ss_pred HHHHHH-HcCCCCCEEECccc-ccChhHHHHHH-HcCCcEEEECchh
Confidence 999999 99999999999999 59999999998 9999999998643
No 10
>3n98_A Alpha-amylase, GH57 family; GH57 family member, branching enzyme, transferase; HET: BGC PG4; 1.87A {Thermococcus kodakarensis} PDB: 3n92_A* 3n8t_A*
Probab=97.44 E-value=9.4e-05 Score=85.01 Aligned_cols=76 Identities=14% Similarity=0.068 Sum_probs=71.7
Q ss_pred cccccceEEeccceeeecCCCCC-HHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCch---------------HHHHH
Q 002366 45 LGKVQKYKNKNGGWCMHDEATTH-YVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSA---------------VQAYL 108 (930)
Q Consensus 45 LV~~GrlE~vgGgwv~~Dea~~~-~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FGhs~---------------~~P~i 108 (930)
|++.|++||+++++.-+-..+.. -|++..|+..|.+.++++||.+|+..|+|.. +++. .+..+
T Consensus 130 L~~~G~iElit~~~tH~~lPLl~~~e~~~~QI~~g~~~~~~~FG~~P~G~WlpE~-ay~~~~~~~~~~~~~~~~~~i~~~ 208 (562)
T 3n98_A 130 LQDQGYVEVITSAATHGYLPLLGRDEAIRAQIANGVATYEKHFGMKPKGIWLPEC-AYRPAGEWELPGGRKVKRQGIEKF 208 (562)
T ss_dssp HHHTTSEEEEEECTTCBCGGGCSCHHHHHHHHHHHHHHHHHHHSSCCSBEECGGG-CBCCSEEEECGGGCEEEECCHHHH
T ss_pred HHHCCCEEEEcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCCCCCEEECccc-ceeCccccccccccccchhhHHHH
Confidence 68899999999999999998875 8999999999999999999999999999998 9998 99999
Q ss_pred HHHhcCCcEEEEec
Q 002366 109 LGVELGFDSVHFAR 122 (930)
Q Consensus 109 l~~~~G~~~~v~~R 122 (930)
|+ ++||+++++-=
T Consensus 209 L~-~~Gi~y~~vd~ 221 (562)
T 3n98_A 209 LE-EFGLRYFFVES 221 (562)
T ss_dssp HH-TTTCCEEEECH
T ss_pred HH-HcCCeEEEECc
Confidence 98 99999999854
No 11
>3p0b_A TT1467 protein; glycoside hydrolase GH57, glycogen branching, transferase; 1.35A {Thermus thermophilus} PDB: 1ufa_A
Probab=97.43 E-value=9.6e-05 Score=84.54 Aligned_cols=76 Identities=13% Similarity=0.044 Sum_probs=71.9
Q ss_pred cccccceEEeccceeeecCCCC-CHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCch-----------------HHH
Q 002366 45 LGKVQKYKNKNGGWCMHDEATT-HYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSA-----------------VQA 106 (930)
Q Consensus 45 LV~~GrlE~vgGgwv~~Dea~~-~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FGhs~-----------------~~P 106 (930)
|+++|++||+++++.-+-..+. .-|++..|+..|.+.++++||.+|+..|+|.. |++. .+.
T Consensus 151 L~~~G~iEiit~~~tH~~lPLl~~~e~~~~QI~~g~~~~~~~FG~~P~G~WlpE~-ay~~~~~~~~~~~~~~~~~~~~l~ 229 (540)
T 3p0b_A 151 AEEGGQVELITSNATHGYSPLLGYDEALWAQIKTGVSTYRRHFAKDPTGFWLPEM-AYRPKGPWKPPVEGPPEGVRPGVD 229 (540)
T ss_dssp HHHHTSEEEEEECTTCBCGGGCSCHHHHHHHHHHHHHHHHHHHSSCCCBEECGGG-CBCCSEEECCSSSCSCCEEECCHH
T ss_pred HHHCCCEEEEcCCchhhHHhcCCCHHHHHHHHHHHHHHHHHHhCCCCCEEECccc-ceeCccccccccccccccchhhHH
Confidence 6889999999999999999988 58999999999999999999999999999998 9998 999
Q ss_pred HHHHHhcCCcEEEEec
Q 002366 107 YLLGVELGFDSVHFAR 122 (930)
Q Consensus 107 ~il~~~~G~~~~v~~R 122 (930)
.+|+ ++||+++++-=
T Consensus 230 ~~L~-~~Gi~y~~vd~ 244 (540)
T 3p0b_A 230 ELLM-RAGIRYTFVDA 244 (540)
T ss_dssp HHHH-HTTCCEEEECT
T ss_pred HHHH-HcCCeEEEECc
Confidence 9998 99999999854
No 12
>2b5d_X Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2.20A {Thermotoga maritima} SCOP: a.8.3.3 c.6.2.4
Probab=96.35 E-value=0.0026 Score=73.80 Aligned_cols=77 Identities=13% Similarity=0.066 Sum_probs=69.8
Q ss_pred ccccccceEEeccceeeecCCCCC--HHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCchHHHHHHHHhcCCcEEEEe
Q 002366 44 GLGKVQKYKNKNGGWCMHDEATTH--YVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFA 121 (930)
Q Consensus 44 ~LV~~GrlE~vgGgwv~~Dea~~~--~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FGhs~~~P~il~~~~G~~~~v~~ 121 (930)
+|++.|++|++++++.-+=--+.. -|++..|+..|.+.+++.||..|+.-|+|-. +.+..+..+|+ ++||+++++.
T Consensus 130 ~L~~~G~vEll~~~y~H~ilPLl~d~~ed~~~QI~~g~~~~~~~FG~~P~G~WlpE~-a~~~~l~~~l~-~~Gi~y~i~d 207 (528)
T 2b5d_X 130 KYQETGKLEIVTCNATHAFLPLYQMYPEVVNAQITVGVKNYEKHMKKHPRGIWLAEC-GYYQGLDLYLA-QNNVEYFFVD 207 (528)
T ss_dssp HHHHHTSEEEEEECTTCBCGGGGTTCHHHHHHHHHHHHHHHHHHHSSCCSEEECGGG-CBCTTHHHHHH-HTTCCEEEEC
T ss_pred HHHHCCCEEEEcCchhhHHHHhcCCCHHHHHHHHHHHHHHHHHHhCCCCCEEECchh-ccChhHHHHHH-HcCCeEEEEC
Confidence 368899999999999877665544 7999999999999999999999999999986 99999999997 9999999997
Q ss_pred c
Q 002366 122 R 122 (930)
Q Consensus 122 R 122 (930)
=
T Consensus 208 ~ 208 (528)
T 2b5d_X 208 S 208 (528)
T ss_dssp T
T ss_pred c
Confidence 5
No 13
>3cl6_A PUUE allantoinase; URIC acid, nitrogen fixation, hydrolase; 1.58A {Pseudomonas fluorescens} PDB: 3cl7_A 3cl8_A 1z7a_A
Probab=88.16 E-value=6.3 Score=42.10 Aligned_cols=75 Identities=13% Similarity=0.039 Sum_probs=61.8
Q ss_pred cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCchHHHHHHHHhcC-CcEEEEecc
Q 002366 45 LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELG-FDSVHFARI 123 (930)
Q Consensus 45 LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FGhs~~~P~il~~~~G-~~~~v~~Ri 123 (930)
++++| .||-+=+|.-.+-..-+.+.+.++|..+.+.|++.+|..|+ +|-. | .++..+..+++ +.| |.+..-.+.
T Consensus 116 i~~~G-heIg~Ht~~H~~~~~~s~~~~~~ei~~~~~~l~~~~G~~p~-g~r~-~-~~~~~~~~~l~-~~G~~~y~ss~~~ 190 (308)
T 3cl6_A 116 MVAAG-HEICSHGYRWIDYQYMDEAQEREHMLEAIRILTELTGERPL-GWYT-G-RTGPNTRRLVM-EEGGFLYDCDTYD 190 (308)
T ss_dssp HHHTT-CEEEECCSSSSCCTTCCHHHHHHHHHHHHHHHHHHHSSCCS-EECC-S-SCCTTHHHHHH-HHCCCSEECCCCC
T ss_pred HHHcC-CEEEeCCCCCcccccCCHHHHHHHHHHHHHHHHHHhCCCcc-eEEC-C-CCCHHHHHHHH-HCCCceEEeccCC
Confidence 46678 89999999877777788999999999999999999999876 5664 3 56888999997 998 988766654
Q ss_pred C
Q 002366 124 D 124 (930)
Q Consensus 124 ~ 124 (930)
+
T Consensus 191 ~ 191 (308)
T 3cl6_A 191 D 191 (308)
T ss_dssp C
T ss_pred C
Confidence 3
No 14
>3s6o_A Polysaccharide deacetylase family protein; ssgcid, NIH, structural genomics, seattle structural genomic for infectious disease; 1.85A {Burkholderia pseudomallei} SCOP: c.6.2.6
Probab=86.79 E-value=21 Score=38.19 Aligned_cols=187 Identities=11% Similarity=0.074 Sum_probs=107.4
Q ss_pred cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCchHHHHHHHHhcC-CcEEEEecc
Q 002366 45 LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELG-FDSVHFARI 123 (930)
Q Consensus 45 LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FGhs~~~P~il~~~~G-~~~~v~~Ri 123 (930)
++++| .||-+=+|.-.+-..-+.+.+.++|..+.+.|++..|..|+ +|- +-.++..+..+++ ++| |.+-.-.+.
T Consensus 121 i~~~G-hEIg~H~~~H~~~~~ls~~~~~~ei~~~~~~l~~~~G~~p~-g~r--~g~~s~~t~~ll~-e~G~f~Ydss~~~ 195 (321)
T 3s6o_A 121 FVELG-HEIACHGWRWIHYQDMTPEREAEHMRLGMEAIERVTGVRPL-GWY--TGRDSPNTHRLVA-EYGGFLYDSDHYG 195 (321)
T ss_dssp HHHTT-CEEEECCSSCSCCTTCCHHHHHHHHHHHHHHHHHHHSCCCC-EEC--CSSCCTTHHHHHH-HHCCCSEECCCCS
T ss_pred HHHcC-CEEeeCCccccccccCCHHHHHHHHHHHHHHHHHHhCCCcc-cEE--CCCCCHHHHHHHH-HcCCeEEEEeccC
Confidence 46678 89988899888888889999999999999999999999876 565 3357888999997 999 998876665
Q ss_pred ChHhHHhhhcCCCeEEEEEcCCCCCCCcceEEeecCcCCCCCCCCCccccCCCCCccCCCCCCCCcHHHHHHHHHHHHHH
Q 002366 124 DYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLLDGYNVEQWVNDFIDAALT 203 (930)
Q Consensus 124 ~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th~~~~~Y~~p~~f~f~~~~~~~p~~~~~~~~~~nv~~~~~~~~~~~~~ 203 (930)
+. .-|+-+..+.. +...=.-.+|...... |+ ++...... .+.++-.+.+.+.+..
T Consensus 196 dd-----------~Py~~~~~~~~--g~~~~l~~iP~t~~~~---D~-------~~~~~~g~--~~~~~~~~~l~~~Fd~ 250 (321)
T 3s6o_A 196 DD-----------LPFWMDVEVSG--GASVPQLIVPYTLDAN---DM-------RFATPQGF--NTADHFFHYLRDAFDV 250 (321)
T ss_dssp CS-----------SCEEEEEECTT--SCEEEEEECCCCSSSB---GG-------GGSSSSCC--CSHHHHHHHHHHHHHH
T ss_pred CC-----------CCcceeccCcC--CCCCCEEEEeEeeeeC---Ce-------eeecCCCC--CCHHHHHHHHHHHHHH
Confidence 41 12322221111 2211112345221110 00 01000000 1123333333333332
Q ss_pred hhcccCCCeeEEEecCCCCCCchhHHHHHHHHHHHHHhcCCCeEEEeCChhhHHHHHHhc
Q 002366 204 QANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKGGRVNALYSTPSLYTEAKNAA 263 (930)
Q Consensus 204 ~~~~~~t~~iL~~~G~Df~y~~a~~~~~~~~~li~~iN~~~~~~i~~sT~~~Yf~a~~~~ 263 (930)
.-...+..--++++|--....+.......++++++++.+.+ .|.+.|.++..+...+.
T Consensus 251 ~y~eg~~ap~~~~i~lH~~~~g~p~r~~~le~fL~~i~~~~--~Vw~~t~~eia~~~~~~ 308 (321)
T 3s6o_A 251 LYEEGDEAPKMMSIGMHCRLLGRPGRFRALQRFLDHIERHD--RVWVARRVEIARHWREH 308 (321)
T ss_dssp HHHHTTTSCEEEEEEEETTTTTSHHHHHHHHHHHHHHHTCS--SEEECCHHHHHHHHHHH
T ss_pred HHHhCCCCCceEEEEeChHHcCCHHHHHHHHHHHHHHHhCC--CEEEEcHHHHHHHHHhh
Confidence 21111111134455432223333344678899999998764 47788988887776654
No 15
>3rxz_A Polysaccharide deacetylase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, carbohydrate esterase family 4; 2.01A {Mycobacterium smegmatis}
Probab=84.53 E-value=6.6 Score=41.72 Aligned_cols=198 Identities=12% Similarity=0.055 Sum_probs=111.8
Q ss_pred cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCC-CchHHHHHHHHhcCCcEEEEecc
Q 002366 45 LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFG-HSAVQAYLLGVELGFDSVHFARI 123 (930)
Q Consensus 45 LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FG-hs~~~P~il~~~~G~~~~v~~Ri 123 (930)
++++| .||-+=||.-.+-..-+.+.+.++|..+.+.|++.+|..|+ +|-+ |+| ++..+..+++ ++||.+..-.+.
T Consensus 97 ~~~~G-hEIg~H~~~H~~~~~~s~~~~~~ei~~~~~~l~~~~G~~p~-~fr~-P~g~~~~~~~~~l~-e~G~~ydss~~~ 172 (300)
T 3rxz_A 97 IARAG-HEIAHHGYLHESLVGADEDTERKILTRGIEALEEVAGVHPV-GYRA-PMWEMNWHTPKLLA-EFGFLYDSTLMD 172 (300)
T ss_dssp HHHTT-CEEEECCSSCCCCTTCCHHHHHHHHHHHHHHHHHHHSCCCC-EECC-GGGCCCTTHHHHHH-HTTCSEECCCCS
T ss_pred HHHcC-CEEEecCCCCcccccCCHHHHHHHHHHHHHHHHHHhCCCCc-EEEC-CCCCCCHHHHHHHH-HcCCEEEeeccC
Confidence 46678 89999999988888889999999999999999999999875 3443 333 5678899997 999998776665
Q ss_pred ChHhHHhhhcCCCeEEEEEcCCCCCCCcceEEeecCcCCCCCC--CCCccccCCCCCccCCCCCCCCcHHHHHHHHHHHH
Q 002366 124 DYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPS--GFHFELTDDFDPVQDNPLLDGYNVEQWVNDFIDAA 201 (930)
Q Consensus 124 ~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th~~~~~Y~~p~--~f~f~~~~~~~p~~~~~~~~~~nv~~~~~~~~~~~ 201 (930)
+. .-| |-..+ +..++ .+|.++..-. .|.|. |-..... ...+.++..+.+.+.+
T Consensus 173 ~~-----------~Py-~~~~~----~~~l~--~iP~~~~~~D~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~f 227 (300)
T 3rxz_A 173 SD-----------HPY-ELAVG----DGSLV--ELPVSWALDDWQQYCFV------PDFSGTG-LIETPAKAIELWRAEL 227 (300)
T ss_dssp CS-----------SCE-EBCCT----TSCCE--ECCCCGGGBSHHHHCCB------TTTBCSS-CCCCHHHHHHHHHHHH
T ss_pred CC-----------Cce-EeecC----CCCeE--EEeeeeecCCcHhhhcc------cccccCC-CCCCHHHHHHHHHHHH
Confidence 41 011 11111 21121 1232211000 00000 0000000 0112233333333333
Q ss_pred HHhhcccCCCeeEEEecCCCCCCchhHHHHHHHHHHHHHhcCCCeEEEeCChhhHHHHHHhcC-CCCCCccCCcccc
Q 002366 202 LTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKGGRVNALYSTPSLYTEAKNAAN-GPWPLKTDDYFPY 277 (930)
Q Consensus 202 ~~~~~~~~t~~iL~~~G~Df~y~~a~~~~~~~~~li~~iN~~~~~~i~~sT~~~Yf~a~~~~~-~~~p~~~gDffpy 277 (930)
... |..+ -++.++......+.......++++++++.+.+ .|.+.|.++..+...+.. ...++..||+-|-
T Consensus 228 d~~---~~~g-~~~~i~~H~~~~g~p~~~~~l~~~l~~~~~~~--~V~~~t~~eia~~~~~~~~~~~~v~~~~~~~~ 298 (300)
T 3rxz_A 228 NAM---RDIG-GAWVLTNHPFLSGRPGRAAALREFIAEVCAMD--DVWVAGMSQIAEHVRAQKLTPRTLTRPELTPV 298 (300)
T ss_dssp HHH---HHHT-CEEEEEECHHHHTSHHHHHHHHHHHHHHHTCT--TEEECCHHHHHHHHHHTCCCCBCCCCCCCC--
T ss_pred HHH---HHcC-CeEEEEEChhhcCCHHHHHHHHHHHHHHHhCC--CEEEEcHHHHHHHHHhhcCCCccccCcccccC
Confidence 221 1112 23344432222222244788899999998754 477889999988776543 4556777888663
No 16
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=53.16 E-value=15 Score=36.09 Aligned_cols=69 Identities=14% Similarity=0.097 Sum_probs=56.9
Q ss_pred cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCC-chHHHHHHHHhcCCcE
Q 002366 45 LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGH-SAVQAYLLGVELGFDS 117 (930)
Q Consensus 45 LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FGh-s~~~P~il~~~~G~~~ 117 (930)
++++| .||-+=+|.-++-..-+.+.+.++|....+.|++..|..|+ +--=|||. +..+..+++ ++||..
T Consensus 52 ~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G~~~~--~fr~P~G~~~~~~~~~~~-~~G~~~ 121 (195)
T 2cc0_A 52 QVDAG-MWVANHSYTHPHMTQLGQAQMDSEISRTQQAIAGAGGGTPK--LFRPPYGETNATLRSVEA-KYGLTE 121 (195)
T ss_dssp HHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHTTSCCCS--EECCGGGCCCHHHHHHHH-HTTCEE
T ss_pred HHHCC-CEEEcCCCCccccccCCHHHHHHHHHHHHHHHHHHhCCCCC--EEECCCCCcCHHHHHHHH-HCCCeE
Confidence 56788 89999999988877788999999999999999999998775 34557875 456778887 899865
No 17
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans}
Probab=49.73 E-value=18 Score=36.71 Aligned_cols=70 Identities=10% Similarity=0.143 Sum_probs=57.6
Q ss_pred cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCC-CchHHHHHHHHhcCCcEE
Q 002366 45 LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFG-HSAVQAYLLGVELGFDSV 118 (930)
Q Consensus 45 LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FG-hs~~~P~il~~~~G~~~~ 118 (930)
++++| .||-+=+|.-++-..-+.+.+.+++..+.+.|++..|..|+ +--=||| ++..+..+++ ++||..+
T Consensus 80 ~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G~~~~--~fr~P~G~~~~~~~~~l~-~~G~~~~ 150 (230)
T 2y8u_A 80 MRDEG-HQVGAHTYDHVSLPSLGYDGIASQMTRLEEVIRPALGVAPA--YMRPPYLETNELVLQVMR-DLDYRVI 150 (230)
T ss_dssp HHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHSSCBS--EECCGGGCCCHHHHHHHH-HTTCEEE
T ss_pred HHHCC-CEEEecccCCCCcccCCHHHHHHHHHHHHHHHHHHhCCCCc--EEECCCCCCCHHHHHHHH-HcCCEEE
Confidence 56788 78999999988887789999999999999999999998765 4455777 4567788887 8999754
No 18
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=49.55 E-value=14 Score=38.12 Aligned_cols=70 Identities=19% Similarity=0.108 Sum_probs=57.6
Q ss_pred cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCC-CchHHHHHHHHhcCCcEE
Q 002366 45 LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFG-HSAVQAYLLGVELGFDSV 118 (930)
Q Consensus 45 LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FG-hs~~~P~il~~~~G~~~~ 118 (930)
++++| .||-+=+|.-++-..-+.+.+.++|..+.+.|++..|..|+ |--=||| ++..+..+++ ++||..+
T Consensus 94 i~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G~~~~--~fr~P~G~~~~~~~~~l~-~~G~~~v 164 (254)
T 2iw0_A 94 MRADG-HLVGSHTYAHPDLNTLSSADRISQMRQLEEATRRIDGFAPK--YMRAPYLSCDAGCQGDLG-GLGYHII 164 (254)
T ss_dssp HHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHSCEES--EECCGGGCCCHHHHHHHH-HTTCEEE
T ss_pred HHHCC-CEEEeeccCCCCcccCCHHHHHHHHHHHHHHHHHHhCCCCC--EEECCCCCCCHHHHHHHH-HcCCeEE
Confidence 56788 89999999988877789999999999999999999998664 4455777 4567888887 8998753
No 19
>3vus_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; deacetyl hydrolase; 1.65A {Escherichia coli}
Probab=43.38 E-value=39 Score=35.02 Aligned_cols=77 Identities=13% Similarity=0.216 Sum_probs=58.0
Q ss_pred cccccceEEeccceeeecCCC-----------------------CC----HHHHHHHHHHHHHHHHHHcCCCCcceeecC
Q 002366 45 LGKVQKYKNKNGGWCMHDEAT-----------------------TH----YVDMIDQTTLGHHYIKQHFNKTPKAGWQID 97 (930)
Q Consensus 45 LV~~GrlE~vgGgwv~~Dea~-----------------------~~----~esiIrQl~~G~~~l~~~FG~~p~vgW~iD 97 (930)
++++|-+||-+=+|..|.-.. .+ -+.+.+++....+.|++.+|..|+ +-.=
T Consensus 132 m~~~G~~eIgsHT~~hH~~~~~~~~G~~~p~~~~~~y~~~~~~~es~~~~~~~i~~ei~~s~~~l~~~~G~~~~--~fr~ 209 (268)
T 3vus_A 132 VARSRLVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTKVEVNPH--VFVW 209 (268)
T ss_dssp HHHTTSEEECBCCSSCCSBCCCC-----CBTTSSCCEETTTTEECCHHHHHHHHHHHHHHHHHHHHHHSCCCCC--EEEC
T ss_pred HHHCCCeEEecCccccccccccccccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC--EEEe
Confidence 467798998888888554211 12 356888899999999999999876 3344
Q ss_pred CCCC-chHHHHHHHHhcCCcEEEEeccC
Q 002366 98 PFGH-SAVQAYLLGVELGFDSVHFARID 124 (930)
Q Consensus 98 ~FGh-s~~~P~il~~~~G~~~~v~~Ri~ 124 (930)
|||. +..+-.+++ ++||+..++.+-.
T Consensus 210 PyG~~n~~~~~~~~-~~Gy~~a~t~~~g 236 (268)
T 3vus_A 210 PYGEANGIAIEELK-KLGYDMFFTLESG 236 (268)
T ss_dssp GGGCCCHHHHHHHH-HTTCCEEECCCSS
T ss_pred CCCcCCHHHHHHHH-HCCCcEEEEecCC
Confidence 9995 667788887 9999998887754
No 20
>3qbu_A Putative uncharacterized protein; metallo enzyme, peptidoglycan, TIM barrel, deacetylase, HYDR; 2.57A {Helicobacter pylori}
Probab=40.95 E-value=32 Score=36.84 Aligned_cols=76 Identities=17% Similarity=0.134 Sum_probs=59.5
Q ss_pred cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCchHHHHHHHHhcCCcEEEEecc
Q 002366 45 LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFARI 123 (930)
Q Consensus 45 LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FGhs~~~P~il~~~~G~~~~v~~Ri 123 (930)
++++|- ||.+=||.=.+-..-+.+.+.++|..+.+.|++.+|..|+ +|-+=-..++..+..+++ ++||.+-.-.+.
T Consensus 109 i~~~Gh-EIg~H~~~H~~~~~~s~~~~~~ei~~~~~~l~~~~G~~p~-~fr~P~g~~~~~~~~~l~-e~G~~ydss~~~ 184 (326)
T 3qbu_A 109 IVDAGH-EVGAHGYSHENPIAMSTKQEEDVLLKSVELIKDLTGKAPT-GYVAPWWEFSNITNELLL-KHGFKYDHSLMH 184 (326)
T ss_dssp HHTTTC-EEEBCCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHSSCCC-EECCGGGCCSSHHHHHHH-TTTCCEECCCCS
T ss_pred HHHcCC-EEEeCCCCCcChhhCCHHHHHHHHHHHHHHHHHHHCCCCc-EEECCCCCCCHHHHHHHH-HcCCEEEeeccC
Confidence 466785 9988899888777779999999999999999999998875 344322235678889997 999998655443
No 21
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=37.81 E-value=26 Score=35.85 Aligned_cols=71 Identities=18% Similarity=0.163 Sum_probs=57.7
Q ss_pred cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCC-CchHHHHHHHHhcCCcEE
Q 002366 45 LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFG-HSAVQAYLLGVELGFDSV 118 (930)
Q Consensus 45 LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~FG-hs~~~P~il~~~~G~~~~ 118 (930)
++++| .||-+=+|.-++-..-+.+.+.++|..+.+.|++.+|..+. -|--=|+| ++..+..+++ ++||..+
T Consensus 103 ~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G~~~~-~~fr~P~G~~~~~~~~~l~-~~G~~~v 174 (247)
T 2j13_A 103 MKDEG-HIIGNHSWSHPDFTAVNDEKLREELTSVTEEIKKVTGQKEV-KYVRPPRGVFSERTLALTK-EMGYYNV 174 (247)
T ss_dssp HHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHCCSCC-CEECCGGGEECHHHHHHHH-HTTCEEE
T ss_pred HHHCC-CEEEecCCCCcChhhCCHHHHHHHHHHHHHHHHHHhCCCCC-cEEeCCCCCCCHHHHHHHH-HCCCEEE
Confidence 56789 78999999988888789999999999999999999998722 24445677 4667888887 9999865
No 22
>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7
Probab=35.79 E-value=7.2 Score=37.44 Aligned_cols=16 Identities=31% Similarity=0.534 Sum_probs=14.2
Q ss_pred CCcceeecCCCCCchH
Q 002366 89 TPKAGWQIDPFGHSAV 104 (930)
Q Consensus 89 ~p~vgW~iD~FGhs~~ 104 (930)
.-+.||..|+|||+++
T Consensus 104 v~~~G~v~D~fGv~W~ 119 (163)
T 1u69_A 104 ESACGWCRDKWGISWQ 119 (163)
T ss_dssp ECSTTEEECTTSCEEE
T ss_pred EEEEEEEECCCCCEEE
Confidence 3489999999999987
No 23
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=33.36 E-value=44 Score=34.30 Aligned_cols=69 Identities=9% Similarity=-0.102 Sum_probs=56.3
Q ss_pred cccccceEEeccceee--ecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCC--C-CchHHHHHHHHhcCCcE
Q 002366 45 LGKVQKYKNKNGGWCM--HDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPF--G-HSAVQAYLLGVELGFDS 117 (930)
Q Consensus 45 LV~~GrlE~vgGgwv~--~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~F--G-hs~~~P~il~~~~G~~~ 117 (930)
++++| .||-+=+|.- ++-..-+.+.+.+++....+.|++..|..|+ |--=|+ | ++..+..+++ +.||..
T Consensus 76 i~~~G-heIg~Ht~~H~~~~l~~ls~~~~~~ei~~~~~~l~~~~G~~~~--~fr~P~~~G~~~~~~~~~l~-~~G~~~ 149 (254)
T 2vyo_A 76 AVEEG-HNVALRVDPSMDEGYQCLSQDALENNVDREIDTIDGLSGTEIR--YAAVPICNGQVNSEMYNILT-ERGVLP 149 (254)
T ss_dssp HHHTT-CEEEEECCGGGTTCGGGSCHHHHHHHHHHHHHHHHHHHTSCCC--EEECCCBTTEECHHHHHHHH-TTTCEE
T ss_pred HHhCC-CEEEecCCCCCCcCcccCCHHHHHHHHHHHHHHHHHHHCCCCe--EEeCCccCCCCCHHHHHHHH-HCCCEE
Confidence 46778 8999999988 6777778999999999999999999998765 345577 6 4567888887 899875
No 24
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=26.96 E-value=45 Score=33.88 Aligned_cols=70 Identities=16% Similarity=0.084 Sum_probs=57.2
Q ss_pred cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCC-CcceeecCCCC-CchHHHHHHHHhcCCcEE
Q 002366 45 LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKT-PKAGWQIDPFG-HSAVQAYLLGVELGFDSV 118 (930)
Q Consensus 45 LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~-p~vgW~iD~FG-hs~~~P~il~~~~G~~~~ 118 (930)
++++| .||-+=+|.-++-..-+.+.+.+++..+.+.|++..|.. |+ +--=||| ++..+..+++ ++||..+
T Consensus 91 ~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G~~~~~--~fr~P~G~~~~~~~~~l~-~~G~~~v 162 (240)
T 1ny1_A 91 MSDEG-HIIGNHSFHHPDLTTKTADQIQDELDSVNEEVYKITGKQDNL--YLRPPRGVFSEYVLKETK-RLGYQTV 162 (240)
T ss_dssp HHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHSCCCCC--EECCGGGEECHHHHHHHH-HTTCEEB
T ss_pred HHHCc-CChhcCCccccccccCCHHHHHHHHHHHHHHHHHHhCCCCCc--EEeCCCCCCCHHHHHHHH-HcCCEEE
Confidence 56788 899999999888777889999999999999999999986 43 4445777 4567888887 9998763
No 25
>3p0b_A TT1467 protein; glycoside hydrolase GH57, glycogen branching, transferase; 1.35A {Thermus thermophilus} PDB: 1ufa_A
Probab=20.97 E-value=3.6e+02 Score=30.77 Aligned_cols=136 Identities=11% Similarity=0.051 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHhhcccCCCeeEEEecC---CCCCCchhHHHHHHHHHHHHHhcCCCeEEEeCChhhHHHHHHhcCCCCC
Q 002366 192 QWVNDFIDAALTQANVTRDNHIMWTMGD---DFQYQYAESWFKQMDKLIHYVNKGGRVNALYSTPSLYTEAKNAANGPWP 268 (930)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~t~~iL~~~G~---Df~y~~a~~~~~~~~~li~~iN~~~~~~i~~sT~~~Yf~a~~~~~~~~p 268 (930)
+-|+.|+...+++......+.|.+|+-. ++.+..+.. -++.+++.+.+ ...++..||++|.+....... ++
T Consensus 347 ~hA~~Fv~~l~~~~~~~~~~lvv~~~D~ElfGHww~eG~~---fL~~l~r~l~~--~~~i~~~T~se~L~~~~~~~~-~~ 420 (540)
T 3p0b_A 347 EHARHFVGLLERLAGRHPEGVILSPYDAELFGHWWYEGVA---WLEAVLRLLAQ--NPKVRPVTAREAVQGPAVRTA-LP 420 (540)
T ss_dssp HHHHHHHHHHHHHHHHSTTCEEEEEEEGGGBTTTBTTHHH---HHHHHHHHHTT--CSSEEECCHHHHTCSCEEECC-CC
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEechhhcccCccHHHH---HHHHHHHHHhh--cCCeEEECHHHHHHhCCCCCC-CC
Confidence 3478888877765554445777788732 233444433 35556666532 246899999999864322111 11
Q ss_pred --CccCCcccccccCCCceeeeeecchhhHHHHHHHhHHHHHHHHHHHhhcCCCC-CCCchHHHHHHhhhcccccc----
Q 002366 269 --LKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGKKSP-GPTTSALGDALGIAQHHDAV---- 341 (930)
Q Consensus 269 --~~~gDffpy~~~~~~ywtG~yTSr~~~K~~~R~~e~~L~~ae~l~~l~~~~~~-~~~~~~l~~~l~~~QhHDaI---- 341 (930)
.|- + .+.++.|.|=-.. +.-..+-++.+.+..++...+. ...++.+++.|++.|-=|=-
T Consensus 421 ~sSWg-~-----~g~~~~Wlg~~~~--------w~~~~l~~a~~~m~~~~~~~~~~~r~l~Qa~RELLlAesSDW~f~~~ 486 (540)
T 3p0b_A 421 EGSWG-R-----GGDHRVWLNEKTL--------DYWEKVYRAEGAMREAARRGVLPEGVLRQAMRELLLLEASDWPFLME 486 (540)
T ss_dssp SBCSS-G-----GGSSTTTSSGGGH--------HHHHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHTBTHHHHTTT
T ss_pred CCCCC-C-----CCCcCccCCCHHH--------HHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHhCccHHHcc
Confidence 111 0 1233567663332 1112222233333333311111 12356677889999988752
Q ss_pred cCCCcc
Q 002366 342 TGTAKQ 347 (930)
Q Consensus 342 tGTs~~ 347 (930)
+||+.+
T Consensus 487 ~~t~~~ 492 (540)
T 3p0b_A 487 TGQAEA 492 (540)
T ss_dssp CTTTHH
T ss_pred CCCchH
Confidence 455543
Done!