Query 002367
Match_columns 930
No_of_seqs 396 out of 2936
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 23:28:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002367.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002367hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3d2f_A Heat shock protein homo 100.0 2E-102 8E-107 939.3 66.3 645 24-778 2-653 (675)
2 4b9q_A Chaperone protein DNAK; 100.0 1.8E-91 6.2E-96 839.1 67.2 594 24-751 2-604 (605)
3 2kho_A Heat shock protein 70; 100.0 1.1E-90 3.8E-95 832.2 55.2 591 24-750 2-603 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 1.3E-84 4.6E-89 772.5 48.4 544 22-691 2-554 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 1.9E-75 6.4E-80 688.8 46.8 500 24-680 2-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 4.4E-61 1.5E-65 552.2 40.9 379 22-419 21-403 (404)
7 4gni_A Putative heat shock pro 100.0 6.5E-61 2.2E-65 551.6 41.1 379 23-422 12-406 (409)
8 3qfu_A 78 kDa glucose-regulate 100.0 1.9E-59 6.5E-64 536.8 42.4 374 24-418 18-394 (394)
9 1dkg_D Molecular chaperone DNA 100.0 2.8E-58 9.5E-63 525.2 38.1 376 25-418 3-383 (383)
10 1jce_A ROD shape-determining p 100.0 2.1E-39 7.2E-44 363.8 24.0 312 24-419 3-328 (344)
11 4e81_A Chaperone protein DNAK; 100.0 1.5E-27 5.3E-32 246.7 23.1 211 428-751 2-216 (219)
12 1u00_A HSC66, chaperone protei 99.9 8.7E-27 3E-31 243.5 23.7 209 430-751 1-213 (227)
13 2fsj_A Hypothetical protein TA 99.9 2.6E-26 9E-31 256.7 12.8 231 136-415 95-343 (346)
14 2ych_A Competence protein PILM 99.9 5.2E-25 1.8E-29 249.9 17.0 309 23-406 12-343 (377)
15 3h1q_A Ethanolamine utilizatio 99.9 6.4E-24 2.2E-28 229.7 23.7 202 140-414 71-272 (272)
16 1k8k_A ARP3, actin-like protei 99.9 8E-25 2.7E-29 251.8 13.0 228 161-416 107-387 (418)
17 2fxu_A Alpha-actin-1, actin, a 99.9 5.8E-24 2E-28 240.8 15.4 307 24-415 5-348 (375)
18 4a2a_A Cell division protein F 99.9 1.4E-22 4.8E-27 231.4 24.6 199 176-417 169-394 (419)
19 3n8e_A Stress-70 protein, mito 99.9 1.4E-21 4.8E-26 195.3 15.9 161 425-691 18-182 (182)
20 2zgy_A Plasmid segregation pro 99.8 1.2E-20 4.2E-25 208.9 13.3 228 134-414 72-319 (320)
21 3h0x_A 78 kDa glucose-regulate 99.7 1.4E-17 4.7E-22 162.2 14.9 147 429-680 2-152 (152)
22 1k8k_B ARP2, actin-like protei 99.7 9.2E-19 3.2E-23 199.2 3.3 215 162-416 105-364 (394)
23 3dob_A Heat shock 70 kDa prote 99.7 2.2E-17 7.4E-22 160.6 12.1 147 429-680 2-152 (152)
24 3dqg_A Heat shock 70 kDa prote 99.7 1.6E-17 5.4E-22 161.4 9.1 146 429-680 2-151 (151)
25 4ehu_A Activator of 2-hydroxyi 99.7 2E-17 6.9E-22 179.1 9.8 183 186-418 68-256 (276)
26 2op6_A Heat shock 70 kDa prote 99.7 1.5E-16 5.1E-21 155.7 13.1 147 429-680 2-152 (152)
27 3js6_A Uncharacterized PARM pr 99.7 1.4E-16 4.9E-21 177.9 12.1 207 163-419 115-339 (355)
28 4apw_A ALP12; actin-like prote 99.5 2.4E-14 8.3E-19 158.5 6.2 204 162-418 106-326 (329)
29 1q5l_A Chaperone protein DNAK; 99.3 2.8E-12 9.5E-17 122.2 8.5 99 425-541 15-117 (135)
30 3dwl_A Actin-related protein 3 99.3 2.7E-12 9.3E-17 146.5 9.5 243 141-416 104-396 (427)
31 3qb0_A Actin-related protein 4 99.3 3.8E-11 1.3E-15 138.4 17.8 178 23-278 22-209 (498)
32 3lof_A Heat shock 70 kDa prote 99.2 2E-11 6.8E-16 112.9 10.3 83 668-752 3-85 (113)
33 4fo0_A Actin-related protein 8 99.1 4.3E-09 1.5E-13 126.1 23.2 102 155-279 187-294 (593)
34 2d0o_A DIOL dehydratase-reacti 99.0 7.9E-09 2.7E-13 116.3 17.5 196 176-416 369-604 (610)
35 2p32_A Heat shock 70 kDa prote 99.0 5.3E-10 1.8E-14 104.3 6.4 82 668-751 12-93 (120)
36 1nbw_A Glycerol dehydratase re 99.0 5.6E-10 1.9E-14 126.1 7.4 194 177-415 372-605 (607)
37 1ud0_A HSC70, 70 kDa heat-shoc 98.8 1.6E-09 5.6E-14 100.0 4.1 78 672-751 2-79 (113)
38 1hux_A Activator of (R)-2-hydr 98.2 2.1E-05 7.1E-10 84.1 17.4 72 341-417 186-257 (270)
39 4am6_A Actin-like protein ARP8 97.8 5.6E-05 1.9E-09 88.2 10.9 124 162-315 222-347 (655)
40 2e2o_A Hexokinase; acetate and 96.2 0.54 1.8E-05 50.2 22.9 49 367-416 239-287 (299)
41 2ews_A Pantothenate kinase; PA 96.0 0.032 1.1E-06 59.4 11.5 76 334-414 207-286 (287)
42 1t6c_A Exopolyphosphatase; alp 96.0 0.049 1.7E-06 59.1 13.1 76 178-272 100-177 (315)
43 3vgl_A Glucokinase; ROK family 95.8 0.29 9.8E-06 53.1 18.5 44 187-233 96-139 (321)
44 2ivn_A O-sialoglycoprotein end 95.7 1.8 6.2E-05 46.9 24.4 65 346-416 228-298 (330)
45 2i7n_A Pantothenate kinase 1; 95.7 0.2 6.8E-06 54.9 16.2 48 368-415 306-359 (360)
46 4db3_A Glcnac kinase, N-acetyl 95.1 0.73 2.5E-05 50.0 18.3 44 187-233 120-163 (327)
47 3vov_A Glucokinase, hexokinase 95.0 0.34 1.2E-05 52.0 15.3 45 186-233 97-141 (302)
48 3l0q_A Xylulose kinase; xlylul 95.0 0.033 1.1E-06 65.5 7.7 84 333-421 408-494 (554)
49 3lof_A Heat shock 70 kDa prote 94.8 0.087 3E-06 47.8 8.4 79 752-843 4-82 (113)
50 2qm1_A Glucokinase; alpha-beta 94.8 0.3 1E-05 52.8 14.4 44 187-233 108-151 (326)
51 3r8e_A Hypothetical sugar kina 94.7 0.28 9.7E-06 53.1 13.9 45 186-233 116-161 (321)
52 4htl_A Beta-glucoside kinase; 94.6 0.65 2.2E-05 49.7 16.2 50 367-416 237-291 (297)
53 2ch5_A NAGK protein; transfera 94.5 6.4 0.00022 42.6 27.5 59 160-227 70-132 (347)
54 3hz6_A Xylulokinase; xylulose, 94.4 0.059 2E-06 62.7 7.8 53 368-421 403-455 (511)
55 4bc3_A Xylulose kinase; transf 94.4 0.054 1.9E-06 63.4 7.5 78 340-419 407-484 (538)
56 2hoe_A N-acetylglucosamine kin 94.4 1.6 5.4E-05 48.4 19.2 42 187-233 188-229 (380)
57 2itm_A Xylulose kinase, xylulo 94.2 0.053 1.8E-06 62.6 6.7 81 335-420 357-438 (484)
58 2zf5_O Glycerol kinase; hypert 94.1 0.068 2.3E-06 61.9 7.5 80 335-420 365-444 (497)
59 3ezw_A Glycerol kinase; glycer 94.1 0.08 2.7E-06 61.8 8.0 83 334-421 371-454 (526)
60 3ll3_A Gluconate kinase; xylul 93.8 0.075 2.6E-06 61.7 7.1 81 335-421 364-445 (504)
61 2gup_A ROK family protein; sug 93.6 1.6 5.5E-05 46.2 16.8 43 186-233 93-135 (292)
62 3i8b_A Xylulose kinase; strain 93.5 0.062 2.1E-06 62.5 5.6 79 335-419 395-474 (515)
63 3ifr_A Carbohydrate kinase, FG 93.3 0.12 4.2E-06 59.9 7.8 81 335-421 371-452 (508)
64 3g25_A Glycerol kinase; IDP007 93.0 0.088 3E-06 61.0 5.9 82 335-421 374-456 (501)
65 4e1j_A Glycerol kinase; struct 92.8 0.07 2.4E-06 62.2 4.7 53 367-421 425-477 (520)
66 2p3r_A Glycerol kinase; glycer 92.6 0.091 3.1E-06 61.1 5.3 82 335-421 371-453 (510)
67 3jvp_A Ribulokinase; PSI-II, N 92.6 0.1 3.6E-06 61.5 5.8 79 335-419 410-490 (572)
68 2dpn_A Glycerol kinase; thermu 92.5 0.16 5.4E-06 58.8 7.1 80 335-419 368-448 (495)
69 3h3n_X Glycerol kinase; ATP-bi 92.4 0.11 3.8E-06 60.3 5.7 82 335-421 373-455 (506)
70 2d4w_A Glycerol kinase; alpha 92.0 0.21 7.2E-06 57.9 7.5 82 335-421 373-455 (504)
71 3zyy_X Iron-sulfur cluster bin 91.9 6.1 0.00021 46.3 19.5 57 331-388 499-555 (631)
72 1bdg_A Hexokinase; phosphotran 91.9 1.5 5.1E-05 49.8 14.1 63 167-234 165-229 (451)
73 1u6z_A Exopolyphosphatase; alp 91.0 1.5 5.1E-05 50.7 13.1 75 179-272 100-176 (513)
74 2ap1_A Putative regulator prot 90.9 1.1 3.7E-05 48.5 11.4 44 187-233 120-163 (327)
75 2w40_A Glycerol kinase, putati 90.9 0.32 1.1E-05 56.3 7.4 81 335-420 376-458 (503)
76 3htv_A D-allose kinase, alloki 90.9 7.8 0.00027 41.4 18.0 49 367-415 239-298 (310)
77 1z6r_A MLC protein; transcript 90.8 1.9 6.4E-05 48.2 13.5 44 187-233 186-229 (406)
78 2uyt_A Rhamnulokinase; rhamnos 90.7 0.2 6.9E-06 57.8 5.4 78 333-416 361-439 (489)
79 2p32_A Heat shock 70 kDa prote 90.3 0.7 2.4E-05 42.3 7.6 78 752-842 13-90 (120)
80 3eno_A Putative O-sialoglycopr 90.2 16 0.00055 39.4 19.8 68 346-418 233-305 (334)
81 3mdq_A Exopolyphosphatase; str 89.7 1 3.6E-05 48.5 9.7 55 179-234 94-149 (315)
82 4e81_A Chaperone protein DNAK; 89.6 0.88 3E-05 46.3 8.5 68 757-842 146-213 (219)
83 1ud0_A HSC70, 70 kDa heat-shoc 89.2 0.82 2.8E-05 41.2 7.1 72 758-842 5-76 (113)
84 3o8m_A Hexokinase; rnaseh-like 89.1 4 0.00014 46.5 14.3 59 173-236 184-244 (485)
85 1cza_N Hexokinase type I; stru 87.5 3.2 0.00011 51.5 13.1 56 173-233 630-688 (917)
86 3h6e_A Carbohydrate kinase, FG 87.4 0.66 2.3E-05 53.3 6.6 72 340-417 362-436 (482)
87 1u00_A HSC66, chaperone protei 86.8 1.4 4.7E-05 45.1 7.9 70 755-842 141-210 (227)
88 3cer_A Possible exopolyphospha 84.3 2.1 7.3E-05 46.6 8.3 54 179-233 107-163 (343)
89 3en9_A Glycoprotease, O-sialog 84.0 25 0.00085 40.7 17.9 42 346-392 232-273 (540)
90 3bex_A Type III pantothenate k 81.2 11 0.00039 38.8 12.1 16 26-41 5-20 (249)
91 3d2f_A Heat shock protein homo 80.8 3.2 0.00011 49.7 8.7 74 755-841 549-622 (675)
92 1woq_A Inorganic polyphosphate 80.4 26 0.0009 36.2 14.8 45 187-233 114-158 (267)
93 2yhx_A Hexokinase B; transfera 78.2 8.6 0.00029 43.5 10.7 55 175-234 164-220 (457)
94 2kho_A Heat shock protein 70; 77.3 2.5 8.4E-05 50.0 6.2 69 755-841 532-600 (605)
95 3hi0_A Putative exopolyphospha 75.5 5.6 0.00019 45.8 8.4 53 179-234 105-158 (508)
96 4b9q_A Chaperone protein DNAK; 73.9 8.3 0.00028 45.4 9.5 67 758-842 535-601 (605)
97 3aap_A Ectonucleoside triphosp 73.7 3.7 0.00013 44.9 5.9 44 188-233 108-157 (353)
98 1iv0_A Hypothetical protein; r 70.9 4.2 0.00014 35.6 4.5 18 24-41 1-18 (98)
99 2aa4_A Mannac kinase, putative 69.8 25 0.00084 36.7 11.3 48 368-415 234-287 (289)
100 3epq_A Putative fructokinase; 69.6 12 0.00043 39.6 8.9 44 187-233 97-140 (302)
101 3mcp_A Glucokinase; structural 66.5 27 0.00094 38.1 11.0 23 19-41 4-26 (366)
102 1z05_A Transcriptional regulat 66.1 22 0.00074 39.8 10.4 44 187-233 208-251 (429)
103 3qbx_A Anhydro-N-acetylmuramic 65.1 12 0.0004 40.9 7.5 66 346-416 265-336 (371)
104 4g9i_A Hydrogenase maturation 63.0 11 0.00039 45.4 7.6 65 350-419 693-762 (772)
105 3f9m_A Glucokinase; hexokinase 61.8 46 0.0016 37.6 11.8 55 173-233 183-240 (470)
106 3cqy_A Anhydro-N-acetylmuramic 61.7 13 0.00043 40.7 6.9 69 341-415 267-341 (370)
107 2yhw_A Bifunctional UDP-N-acet 60.8 52 0.0018 35.2 11.9 44 187-233 131-174 (343)
108 3hm8_A Hexokinase-3; glucose, 59.8 73 0.0025 35.6 12.9 60 169-233 155-217 (445)
109 3cj1_A Ectonucleoside triphosp 57.1 9.7 0.00033 43.0 5.3 56 177-233 131-207 (456)
110 3vth_A Hydrogenase maturation 55.4 23 0.00077 42.7 8.3 65 349-418 680-749 (761)
111 3ttc_A HYPF, transcriptional r 55.0 28 0.00096 41.0 8.9 66 346-416 583-651 (657)
112 1vhx_A Putative holliday junct 53.2 6.6 0.00023 37.2 2.6 18 24-41 3-20 (150)
113 3zx3_A Ectonucleoside triphosp 50.6 21 0.00072 40.1 6.6 42 191-233 151-198 (452)
114 3pdy_A Plectin; cytoskeleton, 49.9 65 0.0022 31.8 9.7 48 787-835 106-153 (210)
115 1nu0_A Hypothetical protein YQ 47.7 12 0.00041 34.8 3.4 17 25-41 4-20 (138)
116 4ep4_A Crossover junction endo 47.6 17 0.00057 35.0 4.4 19 24-42 1-19 (166)
117 1hjr_A Holliday junction resol 45.5 14 0.00048 35.2 3.6 19 24-42 1-19 (158)
118 1hnj_A Beta-ketoacyl-acyl carr 45.4 21 0.00071 37.9 5.4 49 342-393 212-260 (317)
119 3s84_A Apolipoprotein A-IV; fo 44.8 1.8E+02 0.0063 30.1 12.3 149 649-839 65-228 (273)
120 3kbt_A Beta-I spectrin, spectr 44.8 1.4E+02 0.0048 31.3 12.0 38 674-714 11-48 (326)
121 3ven_A O-carbamoyltransferase 43.9 42 0.0014 38.9 7.8 79 336-419 280-360 (576)
122 3ll3_A Gluconate kinase; xylul 42.3 15 0.00053 42.0 3.9 20 23-42 3-22 (504)
123 2uyt_A Rhamnulokinase; rhamnos 41.5 12 0.00041 42.7 2.9 20 23-42 3-22 (489)
124 2ews_A Pantothenate kinase; PA 39.6 15 0.00052 38.7 3.0 24 18-41 14-37 (287)
125 4fla_A Regulation of nuclear P 38.2 1.4E+02 0.0047 28.1 9.1 65 646-720 21-85 (152)
126 2ebd_A 3-oxoacyl-[acyl-carrier 38.1 29 0.00098 36.6 5.1 46 345-393 207-252 (309)
127 1ub7_A 3-oxoacyl-[acyl-carrier 37.6 27 0.00092 37.1 4.7 47 344-393 216-262 (322)
128 3l0q_A Xylulose kinase; xlylul 37.3 18 0.00062 42.0 3.5 20 23-42 4-23 (554)
129 4bc3_A Xylulose kinase; transf 37.1 19 0.00064 41.7 3.6 21 22-42 8-28 (538)
130 2nr5_A Hypothetical protein SO 36.1 1.3E+02 0.0046 22.4 6.6 27 697-723 38-64 (67)
131 3ezw_A Glycerol kinase; glycer 35.8 18 0.00063 41.6 3.2 18 24-41 4-21 (526)
132 3jvp_A Ribulokinase; PSI-II, N 35.7 16 0.00056 42.5 2.8 20 23-42 4-23 (572)
133 3nmd_A CGMP dependent protein 35.2 89 0.003 25.4 6.1 46 653-701 26-71 (72)
134 2p3r_A Glycerol kinase; glycer 35.1 18 0.00061 41.5 3.0 18 24-41 3-20 (510)
135 3i8b_A Xylulose kinase; strain 34.9 19 0.00066 41.3 3.2 19 23-41 4-22 (515)
136 4e1j_A Glycerol kinase; struct 34.4 17 0.00056 42.0 2.5 18 24-41 26-43 (520)
137 1zow_A 3-oxoacyl-[acyl-carrier 34.4 67 0.0023 33.7 7.3 47 344-393 208-254 (313)
138 3hz6_A Xylulokinase; xylulose, 34.2 19 0.00065 41.4 3.0 18 24-41 5-22 (511)
139 3h6e_A Carbohydrate kinase, FG 34.2 20 0.0007 40.8 3.2 18 24-41 6-23 (482)
140 3h3n_X Glycerol kinase; ATP-bi 33.7 21 0.00072 40.9 3.2 20 23-42 4-23 (506)
141 3ifr_A Carbohydrate kinase, FG 33.7 19 0.00064 41.4 2.8 20 23-42 6-25 (508)
142 1mzj_A Beta-ketoacylsynthase I 33.4 64 0.0022 34.5 6.9 46 345-393 228-273 (339)
143 3f31_A Spectrin alpha chain, b 33.1 2.2E+02 0.0076 26.1 9.9 29 727-755 13-41 (149)
144 2dpn_A Glycerol kinase; thermu 32.1 20 0.00069 40.9 2.7 17 25-41 3-19 (495)
145 1kae_A HDH, histidinol dehydro 32.0 68 0.0023 35.4 6.7 68 161-233 154-242 (434)
146 2x3e_A 3-oxoacyl-[acyl-carrier 31.7 72 0.0025 33.9 7.0 46 345-393 221-266 (331)
147 4gic_A HDH, histidinol dehydro 31.4 54 0.0019 36.1 5.7 72 161-233 160-248 (423)
148 2w40_A Glycerol kinase, putati 31.3 21 0.00073 40.8 2.7 18 25-42 5-22 (503)
149 3cet_A Conserved archaeal prot 30.6 25 0.00087 37.6 2.9 72 334-413 243-321 (334)
150 3uul_A Utrophin; spectrin repe 30.4 2.6E+02 0.0089 24.0 14.6 88 705-807 4-99 (118)
151 2aa4_A Mannac kinase, putative 30.4 52 0.0018 34.1 5.5 43 187-233 96-138 (289)
152 3g25_A Glycerol kinase; IDP007 30.3 24 0.00082 40.3 3.0 18 24-41 6-23 (501)
153 2zf5_O Glycerol kinase; hypert 30.2 24 0.00083 40.3 3.0 17 25-41 4-20 (497)
154 3r6n_A Desmoplakin; spectrin r 30.1 1.1E+02 0.0037 34.4 8.2 49 787-836 94-142 (450)
155 3u0c_A Invasin IPAB, 62 kDa an 29.9 61 0.0021 30.5 4.9 82 732-813 99-180 (201)
156 3uul_A Utrophin; spectrin repe 29.5 1E+02 0.0036 26.7 6.6 25 787-811 3-27 (118)
157 1sjj_A Actinin; 3-helix bundle 28.2 3E+02 0.01 33.4 12.6 45 789-835 609-653 (863)
158 1saz_A Probable butyrate kinas 27.9 36 0.0012 37.3 3.8 50 367-416 295-348 (381)
159 2itm_A Xylulose kinase, xylulo 27.8 26 0.0009 39.8 2.7 16 26-41 2-17 (484)
160 1msz_A DNA-binding protein smu 27.6 45 0.0015 28.2 3.4 28 164-191 34-61 (86)
161 1u6e_A 3-oxoacyl-[acyl-carrier 26.8 92 0.0031 33.0 6.8 46 345-393 229-274 (335)
162 2d4w_A Glycerol kinase; alpha 26.6 31 0.001 39.5 3.0 17 25-41 3-19 (504)
163 1zbs_A Hypothetical protein PG 25.9 30 0.001 36.2 2.6 69 341-416 210-280 (291)
164 3lbx_B Beta-I spectrin, spectr 25.3 3E+02 0.01 26.1 9.7 47 788-835 112-158 (185)
165 4dfe_A 3-oxoacyl-[acyl-carrier 25.1 1.4E+02 0.0047 31.8 7.7 48 343-393 229-276 (333)
166 1ted_A PKS18; thiolase fold, s 24.7 61 0.0021 35.6 4.9 46 345-393 284-329 (393)
167 1sjj_A Actinin; 3-helix bundle 24.1 8.7E+02 0.03 29.1 15.7 23 671-693 374-396 (863)
168 3djc_A Type III pantothenate k 24.1 41 0.0014 34.9 3.1 17 25-41 3-19 (266)
169 3r6n_A Desmoplakin; spectrin r 24.0 7.7E+02 0.026 27.3 15.3 130 705-834 95-249 (450)
170 2iak_A Bullous pemphigoid anti 23.9 1.4E+02 0.0047 29.6 7.0 24 787-810 121-144 (224)
171 1zc6_A Probable N-acetylglucos 23.1 36 0.0012 35.9 2.5 64 342-415 227-292 (305)
172 3uun_A Dystrophin; triple heli 22.3 1.4E+02 0.0047 25.8 6.0 24 787-810 3-26 (119)
173 3s21_A 3-oxoacyl-[ACP] synthas 21.8 1.7E+02 0.0057 31.2 7.6 50 341-393 239-288 (345)
174 3uun_A Dystrophin; triple heli 21.1 3.9E+02 0.013 22.8 14.2 89 704-807 3-99 (119)
175 3edv_A Spectrin beta chain, br 20.8 6.8E+02 0.023 25.7 12.3 24 788-811 221-244 (323)
176 1j3n_A 3-oxoacyl-(acyl-carrier 20.7 57 0.002 35.9 3.7 45 348-392 275-321 (408)
177 3gwa_A 3-oxoacyl-(acyl-carrier 20.1 2.1E+02 0.0071 30.8 8.0 49 342-393 260-308 (365)
No 1
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=2.4e-102 Score=939.30 Aligned_cols=645 Identities=27% Similarity=0.454 Sum_probs=560.7
Q ss_pred ccEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceEEEEEeCCcEEEcHhHHhhHhhCccchHhHhhhhhCCCch
Q 002367 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPFK 103 (930)
Q Consensus 24 ~~vvGIDfGTt~s~va~~~~~~g~~~v~iv~n~~~~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~~ 103 (930)
|.+||||||||||+||++ .+| +++|+.|+.|+|.+||+|+|.+++++||..|..++..+|.++++++|||||+.+.
T Consensus 2 m~~iGIDlGTtns~va~~--~~g--~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~ 77 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVA--RNR--GIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYH 77 (675)
T ss_dssp CCCEEEECCSSEEEEEEE--ETT--EEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTT
T ss_pred CcEEEEEcCCCcEEEEEE--ECC--eeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCC
Confidence 569999999999999998 655 5789999999999999999999999999999999999999999999999999665
Q ss_pred hhHhhHhhcCCCceEEECCCCceEEEeC--C-CceecHHHHHHHHHHHHHHHHHHhccCccccEEEeeCCCCCHHHHHHH
Q 002367 104 QVKHLIDSLYLPFNVVEDSRGAVSFKID--E-NNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGL 180 (930)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~eel~a~~L~~lk~~a~~~~~~~~~~~VItVPa~f~~~qR~al 180 (930)
+........++||.++...+|.+.+.+. + +..++|++|++++|++|++.|+.+++.++.++|||||+||++.||+++
T Consensus 78 d~~v~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~ 157 (675)
T 3d2f_A 78 HPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNI 157 (675)
T ss_dssp CTTHHHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHH
T ss_pred cHHHHHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHH
Confidence 4333345568999999887888877654 3 257999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCeeEEechhhHHHHHhcccc-CCC---CCCcEEEEEEcCCCceEEEEEEEeecccccccceeccceEEEEE
Q 002367 181 MQAAELAGMNVLSLVNEHSGAALQYGIDK-DFS---NESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKD 256 (930)
Q Consensus 181 ~~Aa~~AGl~~l~Li~EptAAAl~y~~~~-~~~---~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~~vl~ 256 (930)
++|+++|||++++||+||+|||++|++.+ .++ ..+.++||||+||||||+||+++. .+.++|++
T Consensus 158 ~~Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~------------~g~~~V~a 225 (675)
T 3d2f_A 158 ADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFK------------KGQLKVLG 225 (675)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEE------------TTEEEEEE
T ss_pred HHHHHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEec------------CCeEEEEE
Confidence 99999999999999999999999999865 222 356899999999999999999775 57899999
Q ss_pred ecCCCCcchHHHHHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhcCCCcccEEEeecccCcccEEEecH
Q 002367 257 VRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITR 336 (930)
Q Consensus 257 ~~~d~~lGG~~~D~~L~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~i~ie~l~~~~d~~~~ItR 336 (930)
+.|+..|||.+||++|++||..+|..+ ++.++..+++++.+|+.+||++|+.||.+.++.++|++++++.++.+.|||
T Consensus 226 ~~gd~~lGG~d~D~~l~~~l~~~f~~~--~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr 303 (675)
T 3d2f_A 226 TACDKHFGGRDFDLAITEHFADEFKTK--YKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSR 303 (675)
T ss_dssp EEEETTCSHHHHHHHHHHHHHHHHHHH--TSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEH
T ss_pred EcCCCCccHHHHHHHHHHHHHHHHHHH--hCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeH
Confidence 999999999999999999999999998 888888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHHHhh
Q 002367 337 QKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAAN 416 (930)
Q Consensus 337 ~efe~l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~aa~ 416 (930)
++|+++|.++++++..+|+++|+.++++..+|+.|+||||+||+|+|++.|+++||. .+..+.||++|||+|||++|+.
T Consensus 304 ~~fe~l~~~l~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~-~~~~~~nPdeaVA~GAa~~a~~ 382 (675)
T 3d2f_A 304 EELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGK-PLSTTLNQDEAIAKGAAFICAI 382 (675)
T ss_dssp HHHHHHTHHHHTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTS-CEECCSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCC-CccccCCcchHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999985 6778999999999999999999
Q ss_pred hcCCccccCceeEEeecccceeeeecCCcccCCCCceeEEEeCCCCCCcceeEeeeecccEEEEEEeecCCCCCCCCCCC
Q 002367 417 LSDGIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKDFEVSLAYESEDLLPPGATSP 496 (930)
Q Consensus 417 ls~~~~~~~~~~i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~~~~i~~~y~~~~~~~~~~~~~ 496 (930)
|++.+++ +++.+.|++||+|||++.++.. .....+|||+|++||++++.+|++..++.+.+.|++++.++.+ +|.
T Consensus 383 ls~~~~v-~~~~l~Dv~p~slgi~~~~~~~---~~~~~~li~rnt~iP~~k~~~f~~~~~~~~~~~~~ge~~~~~~-~n~ 457 (675)
T 3d2f_A 383 HSPTLRV-RPFKFEDIHPYSVSYSWDKQVE---DEDHMEVFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPN-TPE 457 (675)
T ss_dssp TCSSCCC-CCCEEEEEECSCEEEEECCTTC---SCSEEEEECTTEEESEEEEEEEEESSCEEEEEEESCGGGSCTT-CCS
T ss_pred hCCCCcc-cceEEEeeeecceEeeecCCCC---CcceEEEEcCCCCCCcccceeeeecCCceEEEEEcCCcccccc-cCc
Confidence 9999999 9999999999999999987521 1234589999999999999999999999999989998888764 589
Q ss_pred ceeEEEEcCCccchhhhccCCCCCCceeEEEEEEccCcceEEeeeeeEEEEEEeeecCccccccccccCCCCCCchhhhh
Q 002367 497 VFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAA 576 (930)
Q Consensus 497 ~i~~~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~a~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (930)
.||+|.|.||++++ +| .+.+|+|+|.+|.||+|+|+.++++.+... +
T Consensus 458 ~lg~f~l~gi~~~~-----~g--~~~~i~v~f~id~~Gil~V~a~~~~~~~~~--~------------------------ 504 (675)
T 3d2f_A 458 QIANWEITGVQLPE-----GQ--DSVPVKLKLRCDPSGLHTIEEAYTIEDIEA--G------------------------ 504 (675)
T ss_dssp EEEEEEEECCCCCS-----SC--SCEEEEEEEEECTTSCEEEEEEEEECC------------------------------
T ss_pred eeeEEEecCcCCCC-----CC--CcceEEEEEEEcCCCcEEEEEEEEeecccc--c------------------------
Confidence 99999999999874 23 334899999999999999998876431100 0
Q ss_pred hccccccccccccCCCCCCCCCchhhhhhcCCCCCCCCCchhhhhhhccccceeeeeeEEEeeccCCCCCCCHHHHHHHH
Q 002367 577 QNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAE 656 (930)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~l~~~~~~~~~~~~ls~~~l~~~~ 656 (930)
+.|...+ +..|+|+.. ..+||+++++++.
T Consensus 505 ---------------------------------------------~~~~t~~--~~~i~i~~~----~~~ls~~ei~~~~ 533 (675)
T 3d2f_A 505 ---------------------------------------------SDTKTVK--KDDLTIVAH----TFGLDAKKLNELI 533 (675)
T ss_dssp -----------------------------------------------CCCCE--EEECEEEEE----CSSCCHHHHHHHH
T ss_pred ---------------------------------------------ccccCcc--eeeEEEecC----CCCCCHHHHHHHH
Confidence 0000011 123444422 1269999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHhhccCcccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHH
Q 002367 657 AKLEELDKKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLD 736 (930)
Q Consensus 657 ~~l~~~~~~D~~~~~~~eakN~LEs~iY~~r~~l~~~~~~~~~~~~~er~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~ 736 (930)
+++.+|...|+.++++.++||.||+|||++|++|++ . |..++++++|++|..+|+++++|||++|+++++++|++|++
T Consensus 534 ~~~~~~~~~D~~~~~~~~~~n~le~~i~~~~~~l~~-~-~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~ 611 (675)
T 3d2f_A 534 EKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKLEE-E-YAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYE 611 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-T-TGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHH
Confidence 999999999999999999999999999999999986 3 88999999999999999999999999888999999999999
Q ss_pred HHHhccchHHHhHHhhhcchHHHHHHHHHHHHHHHHHhcccc
Q 002367 737 VLKAIGDPVFFRFKELTARPASVEHAQKYLGQLQQIVNDWET 778 (930)
Q Consensus 737 ~L~~~~~pi~~R~~e~~~rp~ai~~l~~~l~~~~~~~~~~~~ 778 (930)
+|+++++||..|+.|++.||.+++.|++.|++++.+++.|..
T Consensus 612 ~l~~~~~~i~~r~~e~~~rp~~~~~~~~~~~~~~~~~~~~~~ 653 (675)
T 3d2f_A 612 ELASLGNIIRGRYLAKEEEKKQAIRSKQEASQMAAMAEKLAA 653 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC-----------------
T ss_pred HHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988844
No 2
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=1.8e-91 Score=839.07 Aligned_cols=594 Identities=22% Similarity=0.418 Sum_probs=531.1
Q ss_pred ccEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceEEEEEe-CCcEEEcHhHHhhHhhCccchHhHhhhhhCCCc
Q 002367 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFH-ESTRLLGEEASGIIARYPHRVYSQLRDMIGKPF 102 (930)
Q Consensus 24 ~~vvGIDfGTt~s~va~~~~~~g~~~v~iv~n~~~~r~~PS~V~~~-~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~ 102 (930)
+.|||||||||||+||++ .+| .++++.|..|.|++||+|+|. ++++++|..|..++..+|.++++++|||||+++
T Consensus 2 ~~viGIDlGTT~S~Va~~--~~g--~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~ 77 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIM--DGT--TPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRF 77 (605)
T ss_dssp CCEEEEECCSSEEEEEEE--ETT--EEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBT
T ss_pred CcEEEEEcCCCcEEEEEE--ECC--EEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCC
Confidence 469999999999999999 665 568999999999999999997 568999999999999999999999999999976
Q ss_pred hhhHhhHhhcCCCceEEECCCCceEEEeCCCceecHHHHHHHHHHHHHHHHHHhccCccccEEEeeCCCCCHHHHHHHHH
Q 002367 103 KQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQ 182 (930)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~lk~~a~~~~~~~~~~~VItVPa~f~~~qR~al~~ 182 (930)
.+.........+||.++...+|.+.+.+. +..++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++
T Consensus 78 ~d~~v~~~~~~~p~~~~~~~~g~~~~~~~-~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~ 156 (605)
T 4b9q_A 78 QDEEVQRDVSIMPFKIIAADNGDAWVEVK-GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKD 156 (605)
T ss_dssp TSHHHHHHHTTCSSEEEECTTSBEEEEET-TEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred CCHHHHHHhhcCCeEEEEcCCCceEEEEC-CEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHH
Confidence 55444445568999999988999999886 47899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEEEeecccccccceeccceEEEEEecCCCC
Q 002367 183 AAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAE 262 (930)
Q Consensus 183 Aa~~AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~~vl~~~~d~~ 262 (930)
|+++|||++++||+||+|||++|++... ..+.++||||+||||||+|++++... ...+.++++++.|+.+
T Consensus 157 Aa~~AGl~v~~li~EP~AAAlaygl~~~--~~~~~vlV~DlGGGT~Dvsi~~~~~~--------~~~~~~evla~~gd~~ 226 (605)
T 4b9q_A 157 AGRIAGLEVKRIINEPTAAALAYGLDKG--TGNRTIAVYDLGGGAFDISIIEIDEV--------DGEKTFEVLATNGDTH 226 (605)
T ss_dssp HHHHTTCEEEEEEEHHHHHHHHHHTTSC--CSSEEEEEEEECSSCEEEEEEEEEES--------SSCEEEEEEEEEEETT
T ss_pred HHHHcCCceEEEeCcHHHHHHHhhhhcc--CCCCEEEEEECCCCeEEEEEEEEecC--------CCCceEEEEEecCCCC
Confidence 9999999999999999999999998762 34589999999999999999987521 1137899999999999
Q ss_pred cchHHHHHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhcCCCcccEEEeecccC----cccEEEecHHH
Q 002367 263 LGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVD----IDFRSSITRQK 338 (930)
Q Consensus 263 lGG~~~D~~L~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~i~ie~l~~~----~d~~~~ItR~e 338 (930)
|||.+||.+|++||..+|..+ ++.++..+++++.+|+.+||++|+.||.+..+.+.++.+..+ .++.+.|||++
T Consensus 227 lGG~d~D~~l~~~l~~~f~~~--~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~ 304 (605)
T 4b9q_A 227 LGGEDFDSRLINYLVEEFKKD--QGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAK 304 (605)
T ss_dssp CSHHHHHHHHHHHHHHHHHHH--TCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHH
T ss_pred cChHHHHHHHHHHHHHHHhhh--cCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHH
Confidence 999999999999999999998 888888899999999999999999999999999999887754 67889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHHHhhhc
Q 002367 339 FEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLS 418 (930)
Q Consensus 339 fe~l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~aa~ls 418 (930)
|+++|+++++++..+|+++|+.+++...+|+.|+||||+||+|+|++.|+++||. .+..+.||++|||+|||++|+.++
T Consensus 305 ~e~l~~~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~-~~~~~~nPdeaVA~GAai~a~~l~ 383 (605)
T 4b9q_A 305 LESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGK-EPRKDVNPDEAVAIGAAVQGGVLT 383 (605)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTS-CCCSSSCTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhcc-CcCCCcChhHHHHHhHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999985 678899999999999999999999
Q ss_pred CCccccCceeEEeecccceeeeecCCcccCCCCceeEEEeCCCCCCcceeEeeeecc----cEEEEEEeecCCCCCCCCC
Q 002367 419 DGIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAK----DFEVSLAYESEDLLPPGAT 494 (930)
Q Consensus 419 ~~~~~~~~~~i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~----~~~i~~~y~~~~~~~~~~~ 494 (930)
+.+ +++.+.|++|++|||++.++.+ .+|||+|+++|++++.+|++.. .+.|.+ |+|++.++. +
T Consensus 384 ~~~---~~~~l~dv~p~slgie~~~g~~-------~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v-~~ge~~~~~--~ 450 (605)
T 4b9q_A 384 GDV---KDVLLLDVTPLSLGIETMGGVM-------TTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHV-LQGERKRAA--D 450 (605)
T ss_dssp TSS---CSEEEECBCSSCEEEEETTTEE-------EEEECTTCBSSEEEEEEECCSSTTCCEEEEEE-EESSCSBGG--G
T ss_pred CCC---CceEEEeeeeeEEEEEEcCCEE-------EEEEeCCCcCCcceEEEeeeecccCceEEEEE-Eeccccccc--c
Confidence 874 7899999999999999988755 3899999999999999998765 488998 999988776 6
Q ss_pred CCceeEEEEcCCccchhhhccCCCCCCceeEEEEEEccCcceEEeeeeeEEEEEEeeecCccccccccccCCCCCCchhh
Q 002367 495 SPVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAET 574 (930)
Q Consensus 495 ~~~i~~~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~a~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (930)
|..||+|.+.|+++++. | .| +|+|+|.+|.||+|+|+..+..
T Consensus 451 n~~lg~~~l~~i~~~~~-----g--~~-~i~v~f~id~~gil~v~a~~~~------------------------------ 492 (605)
T 4b9q_A 451 NKSLGQFNLDGINPAPR-----G--MP-QIEVTFDIDADGILHVSAKDKN------------------------------ 492 (605)
T ss_dssp SEEEEEEEEECCCCCST-----T--CC-CEEEEEEECTTSCEEEEEEETT------------------------------
T ss_pred CCEeeEEEEeCCCCCcC-----C--Cc-eEEEEEEEcCCcEEEEEEEecC------------------------------
Confidence 89999999999998853 3 56 8999999999999988644300
Q ss_pred hhhccccccccccccCCCCCCCCCchhhhhhcCCCCCCCCCchhhhhhhccccceeeeeeEEEeeccCCCCCCCHHHHHH
Q 002367 575 AAQNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVD 654 (930)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~l~~~~~~~~~~~~ls~~~l~~ 654 (930)
+ . + ...++|.. ...||++++++
T Consensus 493 -t-------------------g-----------------------------~----~~~i~i~~-----~~~ls~~ei~~ 514 (605)
T 4b9q_A 493 -S-------------------G-----------------------------K----EQKITIKA-----SSGLNEDEIQK 514 (605)
T ss_dssp -T-------------------C-----------------------------C----EECCEEES-----CCSCCHHHHHH
T ss_pred -C-------------------C-----------------------------c----EEEEEecC-----CCCCCHHHHHH
Confidence 0 0 0 01344431 12599999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHhhccCcccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHH
Q 002367 655 AEAKLEELDKKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQER 734 (930)
Q Consensus 655 ~~~~l~~~~~~D~~~~~~~eakN~LEs~iY~~r~~l~~~~~~~~~~~~~er~~l~~~l~e~~~WL~~~g~~a~~~~~~~k 734 (930)
+.+.+.++...|+.++++.++||.||+|||++|..|++ +..++++++|+.+...|+++++||+.+ +.++|+++
T Consensus 515 ~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~ 587 (605)
T 4b9q_A 515 MVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVEE---AGDKLPADDKTAIESALTALETALKGE----DKAAIEAK 587 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHHHSS----CHHHHHHH
T ss_pred HHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhhCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHH
Confidence 99999999999999999999999999999999999973 778999999999999999999999966 58999999
Q ss_pred HHHHHhccchHHHhHHh
Q 002367 735 LDVLKAIGDPVFFRFKE 751 (930)
Q Consensus 735 l~~L~~~~~pi~~R~~e 751 (930)
+++|++.++||..++.+
T Consensus 588 ~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 588 MQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999988753
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=1.1e-90 Score=832.23 Aligned_cols=591 Identities=23% Similarity=0.429 Sum_probs=524.1
Q ss_pred ccEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceEEEEEe-CCcEEEcHhHHhhHhhCccchHhHhhhhhCCCc
Q 002367 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFH-ESTRLLGEEASGIIARYPHRVYSQLRDMIGKPF 102 (930)
Q Consensus 24 ~~vvGIDfGTt~s~va~~~~~~g~~~v~iv~n~~~~r~~PS~V~~~-~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~ 102 (930)
+.+||||||||||+||++ .+| .++|+.|+.|.|++||+|+|. +++++||..|..++..+|.++++++||+||+.+
T Consensus 2 ~~viGIDlGTt~s~va~~--~~g--~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~ 77 (605)
T 2kho_A 2 GKIIGIDLGTTNSCVAIM--DGT--TPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRF 77 (605)
T ss_dssp --CEEEECCSSEEEEEEE--ETT--EEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBS
T ss_pred CCEEEEEcCCcCEEEEEE--ECC--EEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCC
Confidence 358999999999999999 665 578999999999999999995 578999999999999999999999999999965
Q ss_pred h--hhHhhHhhcCCCceEEECCCCceEEEeCCCceecHHHHHHHHHHHHHHHHHHhccCccccEEEeeCCCCCHHHHHHH
Q 002367 103 K--QVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGL 180 (930)
Q Consensus 103 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~lk~~a~~~~~~~~~~~VItVPa~f~~~qR~al 180 (930)
. .++.. ...+||.++.+.+|.+.+.+. |..++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++
T Consensus 78 ~d~~v~~~--~~~~p~~~~~~~~g~~~i~~~-g~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~ 154 (605)
T 2kho_A 78 QDEEVQRD--VSIMPFKIIAADNGDAWVEVK-GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQAT 154 (605)
T ss_dssp SSTTHHHH--HHHCSSCEEECTTSBEEEEET-TEEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHH
T ss_pred CcHHHHHH--hhcCCeEEEECCCCceEEEEC-CEEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHH
Confidence 4 34433 336899998888899999884 578999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEEEeecccccccceeccceEEEEEecCC
Q 002367 181 MQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWD 260 (930)
Q Consensus 181 ~~Aa~~AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~~vl~~~~d 260 (930)
++|+++|||++++||+||+|||++|++.+. ..+.++||||+||||||+|++++.... ..+.++|+++.|+
T Consensus 155 ~~A~~~AGl~v~~li~EP~AAAlay~l~~~--~~~~~vlV~DlGGGT~Dvsi~~~~~~~--------~~g~~~v~a~~gd 224 (605)
T 2kho_A 155 KDAGRIAGLEVKRIINEPTAAALAYGLDKG--TGNRTIAVYDLGGGTFDISIIEIDEVD--------GEKTFEVLATNGD 224 (605)
T ss_dssp HHHHHTTTCEEEEEEEHHHHHHHHTTTTSS--SSEEEEEEEEECSSCEEEEEEEEECTT--------TSCEEEEEEEEEE
T ss_pred HHHHHHcCCceEEEecCHHHHHHHhhhccc--CCCCEEEEEECCCCeEEEEEEEEEecC--------CCCeEEEEEECCC
Confidence 999999999999999999999999998752 246899999999999999999874211 1468999999999
Q ss_pred CCcchHHHHHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhcCCCcccEEEeecccC----cccEEEecH
Q 002367 261 AELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVD----IDFRSSITR 336 (930)
Q Consensus 261 ~~lGG~~~D~~L~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~i~ie~l~~~----~d~~~~ItR 336 (930)
..|||.+||..|++||.++|+.+ ++.++..+++++.+|+.+||++|+.||.+..+.+.+++++++ .++.++|||
T Consensus 225 ~~lGG~d~D~~l~~~l~~~~~~~--~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr 302 (605)
T 2kho_A 225 THLGGEDFDSRLINYLVEEFKKD--QGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTR 302 (605)
T ss_dssp SSCSGGGTHHHHHHHHHHHHHHH--HSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEH
T ss_pred CCccHHHHHHHHHHHHHHHHHHH--hCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeH
Confidence 99999999999999999999988 778888899999999999999999999999999999988763 577889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHHHhh
Q 002367 337 QKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAAN 416 (930)
Q Consensus 337 ~efe~l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~aa~ 416 (930)
++|+++|+++++++..+|+++|+.+++...+|+.|+||||+||+|+|++.|+++||. .+..++||++|||+|||++|+.
T Consensus 303 ~~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~-~~~~~~npd~aVA~GAa~~a~~ 381 (605)
T 2kho_A 303 AKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGK-EPRKDVNPDEAVAIGAAVQGGV 381 (605)
T ss_dssp HHHHTTCCSTTGGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSS-CCBCSSCTTTHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCC-CcCcCCCcchHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999985 6788999999999999999999
Q ss_pred hcCCccccCceeEEeecccceeeeecCCcccCCCCceeEEEeCCCCCCcceeEeeeecc----cEEEEEEeecCCCCCCC
Q 002367 417 LSDGIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAK----DFEVSLAYESEDLLPPG 492 (930)
Q Consensus 417 ls~~~~~~~~~~i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~----~~~i~~~y~~~~~~~~~ 492 (930)
+++. + +++.+.|++|++||+++.++.+ .+|||+|+++|++++..|++.. .+.|.+ |+|++.++.
T Consensus 382 l~~~--~-~~~~l~dv~p~slgi~~~~g~~-------~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v-~~ge~~~~~- 449 (605)
T 2kho_A 382 LTGD--V-KDVLLLDVTPLSLGIETMGGVM-------TTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHV-LQGERKRAA- 449 (605)
T ss_dssp TTTS--C-CCCCCSBCCCCCEEEEETTTEE-------EEEECTTBCSSEEEEEEECCSSTTCCEEEEEE-EESSCSBGG-
T ss_pred hcCC--c-cCceEEeeeeeeccccccCCce-------EEEEecccccCccceEEEEecCCCceEEEEEE-EeccCcccc-
Confidence 9886 4 7889999999999999987755 3899999999999999998754 488888 999987765
Q ss_pred CCCCceeEEEEcCCccchhhhccCCCCCCceeEEEEEEccCcceEEeeeeeEEEEEEeeecCccccccccccCCCCCCch
Q 002367 493 ATSPVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISA 572 (930)
Q Consensus 493 ~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~a~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (930)
+|..||+|.+.|+++++ +| .| +|+|+|.+|.||+|+|+..+. .
T Consensus 450 -~n~~lg~~~l~~i~~~~-----~g--~~-~i~v~f~id~~gil~v~a~~~-----------------------~----- 492 (605)
T 2kho_A 450 -DNKSLGQFNLDGINPAP-----RG--MP-QIEVTFDIDADGILHVSAKDK-----------------------N----- 492 (605)
T ss_dssp -GSEEEEEEEEECCCSCC-----TT--CS-CEEEEEEECTTSCEEEEEEET-----------------------T-----
T ss_pred -cCcEEeEEEecCCCCCC-----CC--Cc-EEEEEEEEcCCCceeEEEEEc-----------------------C-----
Confidence 58899999999998764 23 56 899999999999998864320 0
Q ss_pred hhhhhccccccccccccCCCCCCCCCchhhhhhcCCCCCCCCCchhhhhhhccccceeeeeeEEEeeccCCCCCCCHHHH
Q 002367 573 ETAAQNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEAL 652 (930)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~l~~~~~~~~~~~~ls~~~l 652 (930)
+ . + ...++++. ..+||++++
T Consensus 493 ---t-------------------g-----------------------------~----~~~i~i~~-----~~~ls~~~i 512 (605)
T 2kho_A 493 ---S-------------------G-----------------------------K----EQKITIKA-----SSGLNEDEI 512 (605)
T ss_dssp ---T-------------------C-----------------------------C----EEEEEECT-----TSSCCHHHH
T ss_pred ---C-------------------C-----------------------------c----eeeccccc-----ccCCCHHHH
Confidence 0 0 0 01344431 246999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHhhccCcccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHH
Q 002367 653 VDAEAKLEELDKKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQ 732 (930)
Q Consensus 653 ~~~~~~l~~~~~~D~~~~~~~eakN~LEs~iY~~r~~l~~~~~~~~~~~~~er~~l~~~l~e~~~WL~~~g~~a~~~~~~ 732 (930)
+++.+.+.+|...|+.++++.++||+||+|||++|+.|++ |..++++++|+.+...|+++++|||.+ ++++|+
T Consensus 513 ~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~~---~~~~~~~~~~~~i~~~~~~~~~~l~~~----~~~~~~ 585 (605)
T 2kho_A 513 QKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEE---AGDKLPADDKTAIESALTALETALKGE----DKAAIE 585 (605)
T ss_dssp HHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHTTSS----CHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhccCCHHHHHHHHHHHHHHHHHHhcC----CHHHHH
Confidence 9999999999999999999999999999999999999964 788999999999999999999999943 899999
Q ss_pred HHHHHHHhccchHHHhHH
Q 002367 733 ERLDVLKAIGDPVFFRFK 750 (930)
Q Consensus 733 ~kl~~L~~~~~pi~~R~~ 750 (930)
+++++|+++++||..|++
T Consensus 586 ~~~~~l~~~~~~~~~~~~ 603 (605)
T 2kho_A 586 AKMQELAQVSQKLMEIAQ 603 (605)
T ss_dssp HHHHHHHTTCHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999999875
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=1.3e-84 Score=772.53 Aligned_cols=544 Identities=30% Similarity=0.529 Sum_probs=481.0
Q ss_pred CCccEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceEEEEEeCCcEEEcHhHHhhHhhCccchHhHhhhhhCCC
Q 002367 22 SQSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKP 101 (930)
Q Consensus 22 ~~~~vvGIDfGTt~s~va~~~~~~g~~~v~iv~n~~~~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~ 101 (930)
+++.+||||||||||+||++ .+| .++++.|+.|+|++||+|+|.+++++||..|..++.++|.++++++|||||+.
T Consensus 2 ~m~~~iGIDlGTt~s~va~~--~~g--~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~ 77 (554)
T 1yuw_A 2 SKGPAVGIDLGTTYSCVGVF--QHG--KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRR 77 (554)
T ss_dssp CSCCCEEEEECSSEEEEEEE--CSS--SEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCC
T ss_pred CCCCEEEEEeCcccEEEEEE--ECC--EEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCC
Confidence 55679999999999999999 655 68999999999999999999999999999999999999999999999999996
Q ss_pred chhhHhhHhhcCCCceEEECCCCceEEEe--CCC-ceecHHHHHHHHHHHHHHHHHHhccCccccEEEeeCCCCCHHHHH
Q 002367 102 FKQVKHLIDSLYLPFNVVEDSRGAVSFKI--DEN-NNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERK 178 (930)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~eel~a~~L~~lk~~a~~~~~~~~~~~VItVPa~f~~~qR~ 178 (930)
+.+........++||.++.. +|.+.+.+ .++ ..++|+++++++|++|++.|+.+++.++.++|||||++|++.||+
T Consensus 78 ~~d~~v~~~~~~~p~~v~~~-~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~ 156 (554)
T 1yuw_A 78 FDDAVVQSDMKHWPFMVVND-AGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQ 156 (554)
T ss_dssp SSCSHHHHHHTTCSSEEEEE-TTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHH
T ss_pred CCcHHHHHHhhcCCeEEEec-CCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHH
Confidence 55433333455789998853 56665554 332 689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEEEeecccccccceeccceEEEEEec
Q 002367 179 GLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVR 258 (930)
Q Consensus 179 al~~Aa~~AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~~vl~~~ 258 (930)
++++|+++|||++++|++||+|||++|++.+.. ..+..+||||+||||||+|++++. .+.++++++.
T Consensus 157 a~~~A~~~AGl~~~~li~EP~AAAlay~~~~~~-~~~~~vlV~D~GgGT~Dvsv~~~~------------~g~~~v~a~~ 223 (554)
T 1yuw_A 157 ATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKV-GAERNVLIFDLGGGTFDVSILTIA------------AGIFEVKSTA 223 (554)
T ss_dssp HHHHHHHTTTCEEEEEEEHHHHHHHHTTCSTTC-SSCEEEEEEEECSSCEEEEEEEEE------------TTEEEEEEEE
T ss_pred HHHHHHHHcCCCeEEEeCcHHHHHHHHHhhccC-CCCcEEEEEEcCCCeEEEEEEEEc------------CCcEEEEEEe
Confidence 999999999999999999999999999987632 245899999999999999999774 5789999999
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhcCCCcccEEEeecccCcccEEEecHHH
Q 002367 259 WDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQK 338 (930)
Q Consensus 259 ~d~~lGG~~~D~~L~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~i~ie~l~~~~d~~~~ItR~e 338 (930)
|+..+||.+||+.|++|+..+|..+ ++.++..+++++.+|+.+||++|+.||.+..+.+.+++++++.++...|+|++
T Consensus 224 g~~~lGG~d~d~~l~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~ 301 (554)
T 1yuw_A 224 GDTHLGGEDFDNRMVNHFIAEFKRK--HKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRAR 301 (554)
T ss_dssp EETTCSHHHHHHHHHHHHHHHHHHH--TSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH--hCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHH
Confidence 9999999999999999999999998 78888889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHHHhhhc
Q 002367 339 FEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLS 418 (930)
Q Consensus 339 fe~l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~aa~ls 418 (930)
|+++|+++++++..+|+++|+.+++...+|+.|+||||+||+|+|++.|+++|+..++..+.||++|||+|||++|+.++
T Consensus 302 ~e~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~ 381 (554)
T 1yuw_A 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 381 (554)
T ss_dssp HHHHTHHHHHHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999866788899999999999999999999
Q ss_pred C--CccccCceeEEeecccceeeeecCCcccCCCCceeEEEeCCCCCCcceeEeeeecc----cEEEEEEeecCCCCCCC
Q 002367 419 D--GIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAK----DFEVSLAYESEDLLPPG 492 (930)
Q Consensus 419 ~--~~~~~~~~~i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~----~~~i~~~y~~~~~~~~~ 492 (930)
+ .+++ +++.+.|++|++||+++.++.+ .+||++|+++|++++.+|.+.. .+.|.+ |+|++.++.
T Consensus 382 ~~~~~~~-~~~~~~dv~p~slgi~~~~g~~-------~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v-~~ge~~~~~- 451 (554)
T 1yuw_A 382 GDKSENV-QDLLLLDVTPLSLGIETAGGVM-------TVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQV-YEGERAMTK- 451 (554)
T ss_dssp SCCCCCT-TSSCCCCBCSSCEEEEETTTEE-------EEEECTTCBSSEEEEEEEEESSTTCSEEEEEE-EESSSSBGG-
T ss_pred CCccccc-cceEEEEeeeeEEEEEecCceE-------EEEEECCCccCceeEEEeeeccCCCceEEEEE-EecCccccc-
Confidence 8 4677 8899999999999999987654 3899999999999999998753 488999 999887765
Q ss_pred CCCCceeEEEEcCCccchhhhccCCCCCCceeEEEEEEccCcceEEeeeeeEEEEEEeeecCccccccccccCCCCCCch
Q 002367 493 ATSPVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISA 572 (930)
Q Consensus 493 ~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~a~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (930)
++..||+|.|.|+++++. | .| +|+|+|.+|.||+|+|+..+..
T Consensus 452 -~n~~lg~~~l~~i~~~~~-----g--~~-~i~v~f~id~~gil~v~a~~~~---------------------------- 494 (554)
T 1yuw_A 452 -DNNLLGKFELTGIPPAPR-----G--VP-QIEVTFDIDANGILNVSAVDKS---------------------------- 494 (554)
T ss_dssp -GSEEEEEEEEECCCCCST-----T--CC-CEEEEEEECTTCCEEEEEEETT----------------------------
T ss_pred -cCcEEEEEEEeCCCCCcc-----c--cc-EEEEEEEEccCceEEEEEEecc----------------------------
Confidence 578999999999998752 3 56 8999999999999987644200
Q ss_pred hhhhhccccccccccccCCCCCCCCCchhhhhhcCCCCCCCCCchhhhhhhccccceeeeeeEEEeeccCCCCCCCHHHH
Q 002367 573 ETAAQNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEAL 652 (930)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~l~~~~~~~~~~~~ls~~~l 652 (930)
+ . + ...++++. ...+||++++
T Consensus 495 ---t-------------------------------------g-----------~----~~~~~i~~----~~~~ls~~~i 515 (554)
T 1yuw_A 495 ---T-------------------------------------G-----------K----ENKITITN----DKGRLSKEDI 515 (554)
T ss_dssp ---T-------------------------------------C-----------C----EEEEEECC----CSSCSCHHHH
T ss_pred ---C-------------------------------------C-----------C----ceeEEEec----CCCCCCHHHH
Confidence 0 0 0 01344431 1236999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHhhcc
Q 002367 653 VDAEAKLEELDKKDADRRRTAELKNNLEGYIYATKEKFE 691 (930)
Q Consensus 653 ~~~~~~l~~~~~~D~~~~~~~eakN~LEs~iY~~r~~l~ 691 (930)
+++.+++.+|...|+.++++.++||+||+|||++|++|+
T Consensus 516 ~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~ 554 (554)
T 1yuw_A 516 ERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVE 554 (554)
T ss_dssp HHHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCCCC
T ss_pred HHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999873
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=1.9e-75 Score=688.79 Aligned_cols=500 Identities=27% Similarity=0.500 Sum_probs=437.7
Q ss_pred ccEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceEEEEEeCCcEEEcHhHHhhHhhCccchHhHhhhhhCCCch
Q 002367 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPFK 103 (930)
Q Consensus 24 ~~vvGIDfGTt~s~va~~~~~~g~~~v~iv~n~~~~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~~ 103 (930)
+.+||||||||||+||++ .+| .++++.|+.|.+++||+|+|.+++++||..|..+...+| ++++++||+||+++.
T Consensus 2 ~~~iGIDlGTt~s~va~~--~~g--~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~ 76 (509)
T 2v7y_A 2 SKIIGIDLGTTNSCVAVL--EGG--EVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK 76 (509)
T ss_dssp CCEEEEEECSSEEEEEEE--ETT--EEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC
T ss_pred CCEEEEEcCCceEEEEEE--ECC--EEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE
Confidence 359999999999999999 655 468999999999999999998889999999999999999 999999999998431
Q ss_pred hhHhhHhhcCCCceEEECCCCceEEEeCCCceecHHHHHHHHHHHHHHHHHHhccCccccEEEeeCCCCCHHHHHHHHHH
Q 002367 104 QVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQA 183 (930)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~lk~~a~~~~~~~~~~~VItVPa~f~~~qR~al~~A 183 (930)
+.+ +|..++|+++++++|++|+..++.+++.++.++|||||+||++.||+++++|
T Consensus 77 ------------------------~~~-~g~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a 131 (509)
T 2v7y_A 77 ------------------------VEI-EGKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDA 131 (509)
T ss_dssp ------------------------EEE-TTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred ------------------------EEE-CCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 122 2356899999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEEEeecccccccceeccceEEEEEecCCCCc
Q 002367 184 AELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAEL 263 (930)
Q Consensus 184 a~~AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~~vl~~~~d~~l 263 (930)
++.|||++++|++||+|||++|++.. ..+.++||||+||||||++++++. .+.++++++.++..+
T Consensus 132 ~~~AGl~~~~li~Ep~AAAlay~~~~---~~~~~vlV~D~GgGT~Dvsv~~~~------------~g~~~v~a~~g~~~l 196 (509)
T 2v7y_A 132 GRIAGLEVERIINEPTAAALAYGLDK---EEDQTILVYDLGGGTFDVSILELG------------DGVFEVKATAGDNHL 196 (509)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHTTGGG---SCSEEEEEEEECSSCEEEEEEEEE------------TTEEEEEEEEEETTC
T ss_pred HHHcCCCeEEEecCHHHHHHHHhhcc---CCCCEEEEEECCCCeEEEEEEEEc------------CCeEEEEEecCCCCc
Confidence 99999999999999999999999876 246899999999999999999764 578899999999999
Q ss_pred chHHHHHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhcCCCcccEEEeecccC----cccEEEecHHHH
Q 002367 264 GGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVD----IDFRSSITRQKF 339 (930)
Q Consensus 264 GG~~~D~~L~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~i~ie~l~~~----~d~~~~ItR~ef 339 (930)
||.+||+.|++|+.++|..+ ++.++..+++++.+|+.+||++|+.||.+..+.+.+++++++ .++.++|+|++|
T Consensus 197 GG~d~d~~l~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~f 274 (509)
T 2v7y_A 197 GGDDFDQVIIDYLVNQFKQE--HGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKF 274 (509)
T ss_dssp SHHHHHHHHHHHHHHHHHHH--HSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHH--hCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHH
Confidence 99999999999999999988 677888889999999999999999999999899999887752 467889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHHHhhhcC
Q 002367 340 EELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSD 419 (930)
Q Consensus 340 e~l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~aa~ls~ 419 (930)
+++|+++++++..+|.++|+.+++...+|+.|+|+||+||+|+|++.|++.||. ++..+.||++|||+|||++|+.+++
T Consensus 275 e~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~-~~~~~~~p~~aVa~Gaa~~a~~l~~ 353 (509)
T 2v7y_A 275 EELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGK-EPHKGVNPDEVVAIGAAIQGGVIAG 353 (509)
T ss_dssp HHHTHHHHHTTHHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSS-CCBCCSCTTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCC-CcCcCCCchhhhHhhHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999985 6778999999999999999999987
Q ss_pred CccccCceeEEeecccceeeeecCCcccCCCCceeEEEeCCCCCCcceeEeeeecc----cEEEEEEeecCCCCCCCCCC
Q 002367 420 GIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAK----DFEVSLAYESEDLLPPGATS 495 (930)
Q Consensus 420 ~~~~~~~~~i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~----~~~i~~~y~~~~~~~~~~~~ 495 (930)
. + +++.+.|++|++||+++.++.+ .+||++|+++|++++..|.+.. .+.|.+ |+|++.++. ++
T Consensus 354 ~--~-~~~~~~dv~p~slgi~~~~~~~-------~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v-~~ge~~~~~--~~ 420 (509)
T 2v7y_A 354 E--V-KDVVLLDVTPLSLGIETMGGVF-------TKLIERNTTIPTSKSQVFTTAADNQTTVDIHV-LQGERPMAA--DN 420 (509)
T ss_dssp C--C-CCCCCCCBCSSEEEEEETTTEE-------EEEECTTCBSSEEEEEEECCSSTTCCEEEEEE-EEESSSBGG--GS
T ss_pred C--c-cCceEEEeeccccceeecCCce-------EEEEeCCCcCCcceEEEEEeeccCcEEEEEEE-EecCccccc--cC
Confidence 6 4 7889999999999999987655 3899999999999999998754 488888 999887765 57
Q ss_pred CceeEEEEcCCccchhhhccCCCCCCceeEEEEEEccCcceEEeeeeeEEEEEEeeecCccccccccccCCCCCCchhhh
Q 002367 496 PVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETA 575 (930)
Q Consensus 496 ~~i~~~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~a~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (930)
..||+|.+.|+++.+. | .| +|+|+|.+|.+|+|+|+..+. .
T Consensus 421 ~~lg~~~l~~i~~~~~-----g--~~-~i~v~f~id~~gil~v~a~~~-----------------------~-------- 461 (509)
T 2v7y_A 421 KSLGRFQLTGIPPAPR-----G--VP-QIEVTFDIDANGIVHVRAKDL-----------------------G-------- 461 (509)
T ss_dssp EEEEEEEEECCCCCCT-----T--CS-CEEEEEEECTTSCEEEEEEET-----------------------T--------
T ss_pred cEEEEEEEeCCCCCCC-----c--cc-EEEEEEEEcCCceEEEEEEEc-----------------------C--------
Confidence 8999999999987642 3 56 899999999999998764320 0
Q ss_pred hhccccccccccccCCCCCCCCCchhhhhhcCCCCCCCCCchhhhhhhccccceeeeeeEEEeeccCCCCCCCHHHHHHH
Q 002367 576 AQNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDA 655 (930)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~l~~~~~~~~~~~~ls~~~l~~~ 655 (930)
+ . + ...+.+.. ...||+++++++
T Consensus 462 ~-------------------g-----------------------------~----~~~~~i~~-----~~~l~~~~i~~~ 484 (509)
T 2v7y_A 462 T-------------------N-----------------------------K----EQSITIKS-----SSGLSEEEIQRM 484 (509)
T ss_dssp T-------------------C-----------------------------C----EEEEEECS-----SCSCCSHHHHHH
T ss_pred C-------------------C-----------------------------c----EEEEEEEe-----cCCCCHHHHHHH
Confidence 0 0 0 01344431 135999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHH
Q 002367 656 EAKLEELDKKDADRRRTAELKNNLE 680 (930)
Q Consensus 656 ~~~l~~~~~~D~~~~~~~eakN~LE 680 (930)
.+.+.+|...|+.++++.++||+||
T Consensus 485 ~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 485 IKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp HHHHHHSCGGGGGGGGCCCC-----
T ss_pred HHHHHHhhhccHHHHHHHHHHhhcC
Confidence 9999999999999999999999997
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=4.4e-61 Score=552.23 Aligned_cols=379 Identities=32% Similarity=0.564 Sum_probs=343.6
Q ss_pred CCccEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceEEEEEeCCcEEEcHhHHhhHhhCccchHhHhhhhhCCC
Q 002367 22 SQSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKP 101 (930)
Q Consensus 22 ~~~~vvGIDfGTt~s~va~~~~~~g~~~v~iv~n~~~~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~ 101 (930)
..+.+||||||||||+||++ .+| .++++.|+.|++++||+|+|.+++++||..|...+.++|.++++++||+||++
T Consensus 21 ~~~~viGID~GTt~s~va~~--~~g--~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~ 96 (404)
T 3i33_A 21 QSMPAIGIDLGTTYSCVGVF--QHG--KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRK 96 (404)
T ss_dssp --CCCEEEEECSSEEEEEEE--ETT--EEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCC
T ss_pred ccCCEEEEEcCCccEEEEEE--ECC--eeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCC
Confidence 46789999999999999999 665 57899999999999999999999999999999999999999999999999997
Q ss_pred chhhHhhHhhcCCCceEEECCCCceEEEe--CCC-ceecHHHHHHHHHHHHHHHHHHhccCccccEEEeeCCCCCHHHHH
Q 002367 102 FKQVKHLIDSLYLPFNVVEDSRGAVSFKI--DEN-NNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERK 178 (930)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~eel~a~~L~~lk~~a~~~~~~~~~~~VItVPa~f~~~qR~ 178 (930)
+.+.........+||.+.. .+|...+.+ .+. ..++|+++++++|++|++.++.+++..+.++|||||++|++.||+
T Consensus 97 ~~~~~~~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~ 175 (404)
T 3i33_A 97 FEDATVQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQ 175 (404)
T ss_dssp TTSHHHHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHH
T ss_pred CCcHHHHHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHH
Confidence 6554444455678999886 345555444 332 689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCeeEEechhhHHHHHhccccCCC-CCCcEEEEEEcCCCceEEEEEEEeecccccccceeccceEEEEEe
Q 002367 179 GLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFS-NESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDV 257 (930)
Q Consensus 179 al~~Aa~~AGl~~l~Li~EptAAAl~y~~~~~~~-~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~~vl~~ 257 (930)
++++|++.|||++++|++||+|||++|+...... ..+..++|||+||||||++++++. .+.+++++.
T Consensus 176 ~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~------------~~~~~v~~~ 243 (404)
T 3i33_A 176 ATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIE------------DGIFEVKST 243 (404)
T ss_dssp HHHHHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEE------------TTEEEEEEE
T ss_pred HHHHHHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEe------------CCeEEEEEE
Confidence 9999999999999999999999999998876422 256899999999999999999764 568999999
Q ss_pred cCCCCcchHHHHHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhcCCCcccEEEeecccCcccEEEecHH
Q 002367 258 RWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQ 337 (930)
Q Consensus 258 ~~d~~lGG~~~D~~L~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~i~ie~l~~~~d~~~~ItR~ 337 (930)
.++..+||.+||+.|++++.++|..+ ++.++..+++.+.+|+.+||++|+.||.+..+.+.++.++++.++.+.|+|+
T Consensus 244 ~~~~~lGG~~~d~~l~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~ 321 (404)
T 3i33_A 244 AGDTHLGGEDFDNRMVSHLAEEFKRK--HKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRA 321 (404)
T ss_dssp EEETTCSHHHHHHHHHHHHHHHHHHH--HSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHH
T ss_pred eCCCCCCHHHHHHHHHHHHHHHHHHH--hCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHH
Confidence 99999999999999999999999988 7788888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHHHhhh
Q 002367 338 KFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANL 417 (930)
Q Consensus 338 efe~l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~aa~l 417 (930)
+|+++|+++++++..+|.++|+.+++...+|+.|+|+||+|++|+|++.|++.|++.++..+.||++|||+|||++|+++
T Consensus 322 ~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l 401 (404)
T 3i33_A 322 RFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 401 (404)
T ss_dssp HHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999966688889999999999999999998
Q ss_pred cC
Q 002367 418 SD 419 (930)
Q Consensus 418 s~ 419 (930)
++
T Consensus 402 ~~ 403 (404)
T 3i33_A 402 IG 403 (404)
T ss_dssp C-
T ss_pred cC
Confidence 75
No 7
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=6.5e-61 Score=551.59 Aligned_cols=379 Identities=23% Similarity=0.386 Sum_probs=337.7
Q ss_pred CccEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceEEEEEeCCcEEEcHhHHhhHhhCccchHhHhhhhhCCCc
Q 002367 23 QSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPF 102 (930)
Q Consensus 23 ~~~vvGIDfGTt~s~va~~~~~~g~~~v~iv~n~~~~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~ 102 (930)
.+.+||||||||||+||++ .+| +++++.|..|.+++||+|+|.+++++||..|..++.++|.+++.++|++||+++
T Consensus 12 ~~~vvGIDlGTt~s~va~~--~~g--~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~ 87 (409)
T 4gni_A 12 ERVVIGITFGNSNSSIAHT--VDD--KAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDF 87 (409)
T ss_dssp -CCEEEEEECSSEEEEEEE--ETT--EEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCG
T ss_pred CCcEEEEEcCCCeEEEEEE--eCC--ceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCc
Confidence 4579999999999999998 544 789999999999999999999999999999999999999999999999999976
Q ss_pred hhhHhhHhhcCCCceEEECCCCceEEEeCCC-------ceecHHHHHHHHHHHHHHHHHHhccCccccEEEeeCCCCCHH
Q 002367 103 KQVKHLIDSLYLPFNVVEDSRGAVSFKIDEN-------NNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQA 175 (930)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~eel~a~~L~~lk~~a~~~~~~~~~~~VItVPa~f~~~ 175 (930)
.+...... ..++.+. ..+|.+.+.+..+ ..++|+++++++|++|++.++.+++.++.++|||||++|++.
T Consensus 88 ~~~~~~~~--~~~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~ 164 (409)
T 4gni_A 88 KSVDPTHN--HASAHPQ-EAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEK 164 (409)
T ss_dssp GGCCCGGG--TTSCCCE-EETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHH
T ss_pred cchhhhhh--cccccee-cCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHH
Confidence 55432222 3344433 3467788887642 589999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEEEeecccccccceeccceEEEE
Q 002367 176 ERKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVK 255 (930)
Q Consensus 176 qR~al~~Aa~~AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~~vl 255 (930)
||+++++|++.|||++++||+||+|||++|+........+..+||||+||||||++++++. .+.++++
T Consensus 165 ~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~------------~~~~~v~ 232 (409)
T 4gni_A 165 QKAALIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASR------------SGMYTIL 232 (409)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEE------------TTEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEe------------CCeEEEE
Confidence 9999999999999999999999999999998864223456899999999999999999875 6789999
Q ss_pred EecCCCCcchHHHHHHHHHHHHHHHhhhcCCC--CCCCCcHHHHHHHHHHHHHHhhhhcCCCcccEEEeecccCcccEEE
Q 002367 256 DVRWDAELGGQNMELRLVEYFADEFNKQVGNG--VDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSS 333 (930)
Q Consensus 256 ~~~~d~~lGG~~~D~~L~~~l~~~f~~~~~~~--~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~i~ie~l~~~~d~~~~ 333 (930)
++.++..+||.+||+.|++++..+|..+ ++ .+...+++.+.+|+.+||++|+.||.+..+.+.+++++++.++...
T Consensus 233 ~~~~~~~lGG~~~d~~i~~~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~ 310 (409)
T 4gni_A 233 ATVHDYEYHGIALDKVLIDHFSKEFLKK--NPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFAST 310 (409)
T ss_dssp EEEEESSSSHHHHHHHHHHHHHHHHHHH--STTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEE
T ss_pred EecCCCCcCHHHHHHHHHHHHHHHHHHH--hCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEE
Confidence 9999999999999999999999999988 66 7888889999999999999999999999999999999999999999
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCC-cc------CCCCCcchhh
Q 002367 334 ITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRT-EL------DRHLDADEAI 406 (930)
Q Consensus 334 ItR~efe~l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~-~i------~~~~n~deaV 406 (930)
|||++|+++|+++++++..+|+++|+.+++...+|+.|+|+||+||+|+|++.|+++||.. .+ ..++||++||
T Consensus 311 itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~av 390 (409)
T 4gni_A 311 INRLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQ 390 (409)
T ss_dssp EEHHHHHHHTHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHH
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999975 44 6789999999
Q ss_pred hcccHHHHhhhcCCcc
Q 002367 407 VLGASLLAANLSDGIK 422 (930)
Q Consensus 407 a~GAa~~aa~ls~~~~ 422 (930)
|+|||++|+......+
T Consensus 391 a~GAa~~~~~~~~~~~ 406 (409)
T 4gni_A 391 ARGAALQASLIQEHHH 406 (409)
T ss_dssp HHHHHHHHHHHHC---
T ss_pred HHHHHHHhhhhhhhhc
Confidence 9999999998776543
No 8
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=1.9e-59 Score=536.85 Aligned_cols=374 Identities=34% Similarity=0.592 Sum_probs=341.8
Q ss_pred ccEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceEEEEEeCCcEEEcHhHHhhHhhCccchHhHhhhhhCCCch
Q 002367 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPFK 103 (930)
Q Consensus 24 ~~vvGIDfGTt~s~va~~~~~~g~~~v~iv~n~~~~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~~ 103 (930)
..+|||||||||++||++ .+| .++++.|..|++++||+|+|.+++++||..|.....++|.++++++|++||+++.
T Consensus 18 ~~viGID~GTt~s~va~~--~~g--~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~ 93 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVM--KNG--KTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYN 93 (394)
T ss_dssp CSCEEEEECSSEEEEEEE--CSS--CEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTT
T ss_pred CCEEEEEeCcCcEEEEEE--ECC--eeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCC
Confidence 568999999999999999 655 5789999999999999999999999999999999999999999999999999665
Q ss_pred hhHhhHhhcCCCceEEECCCCceEEEeC--CC-ceecHHHHHHHHHHHHHHHHHHhccCccccEEEeeCCCCCHHHHHHH
Q 002367 104 QVKHLIDSLYLPFNVVEDSRGAVSFKID--EN-NNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGL 180 (930)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~eel~a~~L~~lk~~a~~~~~~~~~~~VItVPa~f~~~qR~al 180 (930)
+.........+||.++ +.++...+.+. +. ..++|+++++++|++|++.++.+++.++.++|||||++|++.||+++
T Consensus 94 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~ 172 (394)
T 3qfu_A 94 DRSVQKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQAT 172 (394)
T ss_dssp CHHHHHHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHH
T ss_pred cHHHHHHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHH
Confidence 4443444567999988 44555555543 32 68999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEEEeecccccccceeccceEEEEEecCC
Q 002367 181 MQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWD 260 (930)
Q Consensus 181 ~~Aa~~AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~~vl~~~~d 260 (930)
++|++.|||++++|++||+|||++|++.. ...+..++|||+||||||++++++. .+.+++++..++
T Consensus 173 ~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~--~~~~~~vlV~D~Gggt~dvsv~~~~------------~~~~~~~~~~~~ 238 (394)
T 3qfu_A 173 KDAGTIAGLNVLRIVNEPTAAAIAYGLDK--SDKEHQIIVYDLGGGTFDVSLLSIE------------NGVFEVQATSGD 238 (394)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHTTTTS--CSSCEEEEEEEECSSCEEEEEEEEE------------TTEEEEEEEEEE
T ss_pred HHHHHHcCCceEEEecCHHHHHHHHhhcc--CCCCceEEEEEcCCCceeEEEEEEe------------CCEEEEEEEcCC
Confidence 99999999999999999999999998765 2346899999999999999999764 678999999999
Q ss_pred CCcchHHHHHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhcCCCcccEEEeecccCcccEEEecHHHHH
Q 002367 261 AELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQKFE 340 (930)
Q Consensus 261 ~~lGG~~~D~~L~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~i~ie~l~~~~d~~~~ItR~efe 340 (930)
..+||.+||+.|++++.++|..+ ++.++..+++.+.+|+.+||++|+.||....+.+.+++++++.++.+.|+|++|+
T Consensus 239 ~~lGG~~~d~~l~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~ 316 (394)
T 3qfu_A 239 THLGGEDFDYKIVRQLIKAFKKK--HGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFE 316 (394)
T ss_dssp TTCSHHHHHHHHHHHHHHHHHHH--HSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHH--cCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHH
Confidence 99999999999999999999988 7788888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHHHhhhc
Q 002367 341 ELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLS 418 (930)
Q Consensus 341 ~l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~aa~ls 418 (930)
++|+++++++..+|.++|+.+++...+|+.|+|+||+|++|+|++.|++.|++.++..+.||++|||+|||++|+++|
T Consensus 317 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 317 ELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999666888899999999999999999875
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=2.8e-58 Score=525.18 Aligned_cols=376 Identities=28% Similarity=0.513 Sum_probs=334.2
Q ss_pred cEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceEEEEEe-CCcEEEcHhHHhhHhhCccchHhHhhhhhCCCch
Q 002367 25 AVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFH-ESTRLLGEEASGIIARYPHRVYSQLRDMIGKPFK 103 (930)
Q Consensus 25 ~vvGIDfGTt~s~va~~~~~~g~~~v~iv~n~~~~r~~PS~V~~~-~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~~ 103 (930)
.+||||||||||+||++ .+| .++++.|+.|.+++||+|+|. +++++||..|.....++|.++++++|++||+.+.
T Consensus 3 ~~vGIDlGTt~s~va~~--~~g--~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~ 78 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIM--DGT--TPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQ 78 (383)
T ss_dssp CCCEEECCSSEEEEEEE--ETT--EEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSC
T ss_pred cEEEEEcCCCCEEEEEE--ECC--eeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCC
Confidence 58999999999999999 655 568899999999999999995 4789999999999999999999999999999654
Q ss_pred hhHhhHhhcCCCceEEECCCCceEEEeCCCceecHHHHHHHHHHHHHHHHHHhccCccccEEEeeCCCCCHHHHHHHHHH
Q 002367 104 QVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQA 183 (930)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~lk~~a~~~~~~~~~~~VItVPa~f~~~qR~al~~A 183 (930)
+.........+||.++.+.++.+.+.+. |..++|+++++++|+++++.|+.+++.++..+|||||++|++.||+++++|
T Consensus 79 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~-g~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a 157 (383)
T 1dkg_D 79 DEEVQRDVSIMPFKIIAADNGDAWVEVK-GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (383)
T ss_dssp SHHHHHHTTTCSSEEEECSSSBEEEEET-TEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHH
T ss_pred cHHHHHHhhcCCeEEEEcCCCcEEEEEC-CEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 3222233446899998888888888884 468999999999999999999999988889999999999999999999999
Q ss_pred HHHcCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEEEeecccccccceeccceEEEEEecCCCCc
Q 002367 184 AELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAEL 263 (930)
Q Consensus 184 a~~AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~~vl~~~~d~~l 263 (930)
++.||++++.+++||+|||++|+.... ..+..+||||+||||||++++++.... ..+.++++++.++..+
T Consensus 158 ~~~aGl~~~~li~Ep~Aaa~~~~~~~~--~~~~~~lVvD~Gggttdvsv~~~~~~~--------~~~~~~v~~~~~~~~l 227 (383)
T 1dkg_D 158 GRIAGLEVKRIINEPTAAALAYGLDKG--TGNRTIAVYDLGGGTFDISIIEIDEVD--------GEKTFEVLATNGDTHL 227 (383)
T ss_dssp HHHTTCEESCCCBHHHHHHHHHTCCC---CCEEEEEEEEECSSCEEEEEEEEEC------------CCCEEEEEEEESSC
T ss_pred HHHcCCceEEEeccHHHHHHHHHhccC--CCCcEEEEEEcCCCeEEEEEEEEEecC--------CCCeEEEEEEeCCCCC
Confidence 999999999999999999999987652 246799999999999999999874210 1356888998898899
Q ss_pred chHHHHHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhcCCCcccEEEeeccc---C-cccEEEecHHHH
Q 002367 264 GGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYV---D-IDFRSSITRQKF 339 (930)
Q Consensus 264 GG~~~D~~L~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~i~ie~l~~---~-~d~~~~ItR~ef 339 (930)
||.+||+.|++++.++|..+ ++.++..+++.+.+|+.+||++|+.||......+.++.+++ + .++.+.|+|++|
T Consensus 228 GG~~id~~l~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~ 305 (383)
T 1dkg_D 228 GGEDFDSRLINYLVEEFKKD--QGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKL 305 (383)
T ss_dssp SHHHHHHHHHHHHHHHHHHH--HCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHH--hCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHH
Confidence 99999999999999999888 67778788999999999999999999998888888887765 2 566789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHHHhhhc
Q 002367 340 EELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLS 418 (930)
Q Consensus 340 e~l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~aa~ls 418 (930)
+++|+++++++..+|.++|+.+++...+|+.|+|+||+|++|+|++.|++.|+. ++..+.||++|||+|||++|++|+
T Consensus 306 ~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~-~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 306 ESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGK-EPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHSHHHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSS-CCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCC-CCCCCcChHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999889999999999999999999999999985 677889999999999999999875
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=2.1e-39 Score=363.82 Aligned_cols=312 Identities=20% Similarity=0.276 Sum_probs=240.9
Q ss_pred ccEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceEEEEEeCC--cE-EEcHhHHhhHhhCccchHhHhhhhhCC
Q 002367 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHES--TR-LLGEEASGIIARYPHRVYSQLRDMIGK 100 (930)
Q Consensus 24 ~~vvGIDfGTt~s~va~~~~~~g~~~v~iv~n~~~~r~~PS~V~~~~~--~~-~~G~~A~~~~~~~p~~~~~~~K~llG~ 100 (930)
+.+|||||||+||++++. ++ + ++.+ +||+|+|... ++ ++|.+|.....++|.++..
T Consensus 3 ~~~igIDlGT~~s~v~~~----~~-~--~~~~------~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~-------- 61 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLR----GK-G--IVVN------EPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKA-------- 61 (344)
T ss_dssp -CEEEEEECSSEEEEEET----TT-E--EEEE------EESCEEEETTTCCEEEESHHHHTTTTCCCTTEEE--------
T ss_pred CceEEEEcCcCcEEEEEC----CC-C--EEEe------eCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEE--------
Confidence 358999999999999865 32 2 2222 7999999764 44 7999998877666665321
Q ss_pred CchhhHhhHhhcCCCceEEECCCCceEEEeCCCceecHHHHHHHHHHHHHHHHHHhccCccccEEEeeCCCCCHHHHHHH
Q 002367 101 PFKQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGL 180 (930)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~lk~~a~~~~~~~~~~~VItVPa~f~~~qR~al 180 (930)
..|+. +|. +. ....++++++++|++++.. ..++ ...+|||||++|++.||+++
T Consensus 62 ------------~~p~~-----~g~----i~--~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~ 114 (344)
T 1jce_A 62 ------------IRPMR-----DGV----IA--DYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAI 114 (344)
T ss_dssp ------------ECCEE-----TTE----ES--SHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHH
T ss_pred ------------EecCC-----CCe----eC--ChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHH
Confidence 01211 121 11 1224677777777766542 1233 36899999999999999999
Q ss_pred HHHHHHcCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEEEeecccccccceeccceEEEEEecCC
Q 002367 181 MQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWD 260 (930)
Q Consensus 181 ~~Aa~~AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~~vl~~~~d 260 (930)
++|++.||++++.+++||+|||++|+... ..+..++|||+||||||+++++.. .+ + ..++
T Consensus 115 ~~a~~~aG~~~~~li~ep~Aaa~~~~~~~---~~~~~~lVvDiGggttdvsv~~~~--------------~~--~-~~~~ 174 (344)
T 1jce_A 115 LDAGLEAGASKVFLIEEPMAAAIGSNLNV---EEPSGNMVVDIGGGTTEVAVISLG--------------SI--V-TWES 174 (344)
T ss_dssp HHHHHHTTCSEEEEEEHHHHHHHHTTCCT---TSSSCEEEEEECSSCEEEEEEETT--------------EE--E-EEEE
T ss_pred HHHHHHcCCCeEeccCCHHHHHHhcCCCC---CCCceEEEEEeCCCeEEEEEEEcC--------------CE--E-eeCC
Confidence 99999999999999999999999998754 345789999999999999999642 11 1 2345
Q ss_pred CCcchHHHHHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhcCCCc------ccEEEe--ecccCcccEE
Q 002367 261 AELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTM------APISVE--SLYVDIDFRS 332 (930)
Q Consensus 261 ~~lGG~~~D~~L~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~------~~i~ie--~l~~~~d~~~ 332 (930)
..+||.+||+.|++++.++|.. ++. +..||++|+.|+.... ..+.++ ++.++.++.+
T Consensus 175 ~~lGG~~id~~l~~~l~~~~~~------~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 239 (344)
T 1jce_A 175 IRIAGDEMDEAIVQYVRETYRV------AIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKL 239 (344)
T ss_dssp ESCSHHHHHHHHHHHHHHHHCE------ECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEE
T ss_pred CCccChhHHHHHHHHHHHHhCc------ccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeE
Confidence 6899999999999999887632 221 4689999999997643 234443 4567777889
Q ss_pred EecHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--cCCc-cEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcc
Q 002367 333 SITRQKFEELCEDLWERSLVPLREVLNYSGLK--MDEI-YAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLG 409 (930)
Q Consensus 333 ~ItR~efe~l~~~~~~~i~~~i~~~L~~a~~~--~~~I-~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~G 409 (930)
+|+|++|+++|+++++++.++|.++|+.++.. .+.+ +.|+|+||+|++|.|++.|++.|+. ++....||++|||+|
T Consensus 240 ~i~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~-~v~~~~~p~~ava~G 318 (344)
T 1jce_A 240 TLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGI-SVIRSEEPLTAVAKG 318 (344)
T ss_dssp EEEHHHHHHHTHHHHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSS-CEEECSSTTTHHHHH
T ss_pred EEeHHHHHHHHHHHHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCC-CccccCChHHHHHHH
Confidence 99999999999999999999999999987532 2234 6899999999999999999999986 566788999999999
Q ss_pred cHHHHhhhcC
Q 002367 410 ASLLAANLSD 419 (930)
Q Consensus 410 Aa~~aa~ls~ 419 (930)
|+++|+.++.
T Consensus 319 aa~~a~~~~~ 328 (344)
T 1jce_A 319 AGMVLDKVNI 328 (344)
T ss_dssp HHHGGGCHHH
T ss_pred HHHHHhChHH
Confidence 9999997663
No 11
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=99.96 E-value=1.5e-27 Score=246.65 Aligned_cols=211 Identities=12% Similarity=0.227 Sum_probs=180.4
Q ss_pred eEEeecccceeeeecCCcccCCCCceeEEEeCCCCCCcceeEeeeecc----cEEEEEEeecCCCCCCCCCCCceeEEEE
Q 002367 428 GMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAK----DFEVSLAYESEDLLPPGATSPVFAKYAV 503 (930)
Q Consensus 428 ~i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~----~~~i~~~y~~~~~~~~~~~~~~i~~~~i 503 (930)
.+.|++|+++||++.++.+. +|||+|++||++++.+|++.. .+.|.+ |+|++.++. +|..||+|.|
T Consensus 2 ~l~DV~p~slGie~~gg~~~-------~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~V-yqGe~~~~~--dn~~Lg~f~l 71 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVMT-------TLIAKNTTIPTKHSQVFSTAEDNQSAVTIHV-LQGERKRAA--DNKSLGQFNL 71 (219)
T ss_dssp CCCCBCSSCEEEEETTTEEE-------EEECTTCBSSEEEEEEEEESSTTCCEEEEEE-EESSCSBGG--GSEEEEEEEE
T ss_pred eEEEecCcEEEEEEeCCEEE-------EEEeCcCcccEeEEEEEEeCCCCCceEEEEE-EEcCCcccc--cCCEEEEEEE
Confidence 57899999999999887653 899999999999999998865 499999 999988865 6899999999
Q ss_pred cCCccchhhhccCCCCCCceeEEEEEEccCcceEEeeeeeEEEEEEeeecCccccccccccCCCCCCchhhhhhcccccc
Q 002367 504 SGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEA 583 (930)
Q Consensus 504 ~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~a~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (930)
.||++++. | .| .|+|+|.+|.||+|+|+..+.- +
T Consensus 72 ~gipp~p~-----G--~~-~IeVtf~iD~nGiL~V~a~d~~-------------------------------t------- 105 (219)
T 4e81_A 72 DGINPAPR-----G--MP-QIEVTFDIDADGILHVSAKDKN-------------------------------S------- 105 (219)
T ss_dssp ECCCCCST-----T--CS-CEEEEEEECTTCCEEEEEEETT-------------------------------T-------
T ss_pred eCCCCCCC-----C--Cc-eEEEEEEeCCCCCEeeeeeccc-------------------------------c-------
Confidence 99998753 3 56 8999999999999987654310 0
Q ss_pred ccccccCCCCCCCCCchhhhhhcCCCCCCCCCchhhhhhhccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHHHHH
Q 002367 584 NENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELD 663 (930)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~l~~~~~~~~~~~~ls~~~l~~~~~~l~~~~ 663 (930)
. ....+.|+. ...||+++++++.+.+.++.
T Consensus 106 ------------g---------------------------------~~~~i~I~~-----~~~Ls~eeI~~m~~~a~~~~ 135 (219)
T 4e81_A 106 ------------G---------------------------------KEQKITIKA-----SSGLNEDEIQKMVRDAEANA 135 (219)
T ss_dssp ------------C---------------------------------CEEEEEECT-----TCSCCHHHHHHHHHHHHHTH
T ss_pred ------------C---------------------------------ccceEeeec-----cccccHHHHHHHHHHHHHhh
Confidence 0 001445531 12599999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHhHHHHHHhhccCcccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhccc
Q 002367 664 KKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGD 743 (930)
Q Consensus 664 ~~D~~~~~~~eakN~LEs~iY~~r~~l~~~~~~~~~~~~~er~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~ 743 (930)
..|+.++++.++||.||+|||++|..|.+ +..+.++++|+.|...|.++++||+++ ++++|++++++|+.++.
T Consensus 136 ~eD~~~r~~~e~kn~le~~i~~~~~~l~~---~~~~l~~~~k~~i~~~l~~~~~~L~~~----~~~~i~~~~~~L~~~~~ 208 (219)
T 4e81_A 136 EADRKFEELVQTRNQGDHLLHSTRKQVEE---AGDKLPADDKTAIESALTALETALKGE----DKAAIEAKMQELAQVSQ 208 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHHHSS----CHHHHHHHHHHHHHHTH
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHH---hhhhCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999974 778899999999999999999999976 79999999999999999
Q ss_pred hHHHhHHh
Q 002367 744 PVFFRFKE 751 (930)
Q Consensus 744 pi~~R~~e 751 (930)
||..|+..
T Consensus 209 ~i~~~~~~ 216 (219)
T 4e81_A 209 KLMEIAQQ 216 (219)
T ss_dssp HHHHHC--
T ss_pred HHHHHHhc
Confidence 99999875
No 12
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.95 E-value=8.7e-27 Score=243.52 Aligned_cols=209 Identities=14% Similarity=0.194 Sum_probs=177.1
Q ss_pred EeecccceeeeecCCcccCCCCceeEEEeCCCCCCcceeEeeeecc----cEEEEEEeecCCCCCCCCCCCceeEEEEcC
Q 002367 430 VDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAK----DFEVSLAYESEDLLPPGATSPVFAKYAVSG 505 (930)
Q Consensus 430 ~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~----~~~i~~~y~~~~~~~~~~~~~~i~~~~i~~ 505 (930)
.|++||+|||++.++.+ .+|||+|++||++++.+|++.. .|.|.+ |+|++.++. +|..||+|.|.|
T Consensus 1 ~Dv~p~slGie~~~g~~-------~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v-~qGe~~~~~--~n~~Lg~f~l~g 70 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLV-------EKVIPRNTTIPVARAQDFTTFKDGQTAMSIHV-MQGERELVQ--DCRSLARFALRG 70 (227)
T ss_dssp CCBCSSCEEEEETTTEE-------EEEECTTCBSSEEEEEEEECSSTTCCCEEEEE-EECSSSBGG--GSEEEEEEEECC
T ss_pred CCcccceEEEEEeCCEE-------EEEEeCcCccCceEEEEEEecCCCceEEEEEE-EecCCccCC--CCCEEEEEEEeC
Confidence 37999999999987655 3899999999999999999865 489999 889988776 588999999999
Q ss_pred CccchhhhccCCCCCCceeEEEEEEccCcceEEeeeeeEEEEEEeeecCccccccccccCCCCCCchhhhhhcccccccc
Q 002367 506 LAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEANE 585 (930)
Q Consensus 506 i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~a~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (930)
|++++. | .| +|+|+|++|.||+|+|...+. . +
T Consensus 71 i~~~p~-----G--~~-~I~Vtf~iD~nGiL~V~a~d~-----------------------~--------t--------- 102 (227)
T 1u00_A 71 IPALPA-----G--GA-HIRVTFQVDADGLLSVTAMEK-----------------------S--------T--------- 102 (227)
T ss_dssp CCCCST-----T--CS-CEEEEEEECTTCCEEEEEEET-----------------------T--------T---------
T ss_pred CCCCCC-----C--ce-EEEEEEEECCCCcEEEEeecc-----------------------c--------c---------
Confidence 998752 3 56 899999999999998864420 0 0
Q ss_pred ccccCCCCCCCCCchhhhhhcCCCCCCCCCchhhhhhhccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHHHHHHH
Q 002367 586 NLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDKK 665 (930)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~l~~~~~~~~~~~~ls~~~l~~~~~~l~~~~~~ 665 (930)
+ + ...+.|.. ...||+++++++.+.+.+|...
T Consensus 103 ----------------------------g-----------~----~~~i~i~~-----~~~Ls~eei~~~~~~~~~~~~~ 134 (227)
T 1u00_A 103 ----------------------------G-----------V----EASIQVKP-----SYGLTDSEIASMIKDSMSYAEQ 134 (227)
T ss_dssp ----------------------------C-----------C----EEEEEECC-----CSCCCHHHHHHHHHHHHHTHHH
T ss_pred ----------------------------c-----------c----cceEEEEe-----ccCCCHHHHHHHHHHHHhhhcc
Confidence 0 0 01344431 1359999999999999999999
Q ss_pred HHHHHHHHHHHHhHHhHHHHHHhhccCcccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhccchH
Q 002367 666 DADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGDPV 745 (930)
Q Consensus 666 D~~~~~~~eakN~LEs~iY~~r~~l~~~~~~~~~~~~~er~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi 745 (930)
|+.++++.++||.||+|||++|+.|.+ +..++++++|+.|...|+++++|||.+ ++++|++++++|+++++||
T Consensus 135 D~~~~e~~e~kn~le~~i~~~~~~l~~---~~~~~~~~~k~~i~~~l~~~~~wl~~~----d~~~~~~~~~~L~~~~~~i 207 (227)
T 1u00_A 135 DVKARMLAEQKVEAARVLESLHGALAA---DAALLSAAERQVIDDAAAHLSEVAQGD----DVDAIEQAIKNVDKQTQDF 207 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHTTSS----CHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHh---hhccCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999974 678899999999999999999999944 5899999999999999999
Q ss_pred HHhHHh
Q 002367 746 FFRFKE 751 (930)
Q Consensus 746 ~~R~~e 751 (930)
..|+..
T Consensus 208 ~~r~~~ 213 (227)
T 1u00_A 208 AARRMD 213 (227)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998753
No 13
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.93 E-value=2.6e-26 Score=256.70 Aligned_cols=231 Identities=19% Similarity=0.144 Sum_probs=168.7
Q ss_pred ecHHHHHHHHHHHHHHHHHHhccCccccEE--EeeCCCCCHHHHHHHHHHHHHc--------C------CCeeEEechhh
Q 002367 136 FSVEELLAMVLSYAVNLVDTHAKLAVKDFV--ISVPPYFGQAERKGLMQAAELA--------G------MNVLSLVNEHS 199 (930)
Q Consensus 136 ~~~eel~a~~L~~lk~~a~~~~~~~~~~~V--ItVPa~f~~~qR~al~~Aa~~A--------G------l~~l~Li~Ept 199 (930)
+..+...++++..|+..++...+.+ .++| |+||++|+..||+++++|+..+ | ++.+.+++||+
T Consensus 95 ~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~ 173 (346)
T 2fsj_A 95 LASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGV 173 (346)
T ss_dssp TTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTH
T ss_pred ccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHH
Confidence 4457778888888877653233333 4699 9999999999999999997765 4 34588999999
Q ss_pred HHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEEEeecccccccceeccceEEEEEecCCCCcchHHHHHHHHHHHHHH
Q 002367 200 GAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADE 279 (930)
Q Consensus 200 AAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~~vl~~~~d~~lGG~~~D~~L~~~l~~~ 279 (930)
|||++|.....+.+....++|||+||||||++++++. ++. .+.+..++..+||.+|++.|++++.++
T Consensus 174 AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~------------~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~ 240 (346)
T 2fsj_A 174 GAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLM------------DME-PVVELSFSLQIGVGDAISALSRKIAKE 240 (346)
T ss_dssp HHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETT------------TTE-ECGGGCEEESCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccccccccCCcEEEEECCCCcEEEEEEEec------------CCE-EEeecCCCcchhHHHHHHHHHHHHHHH
Confidence 9999982221222234789999999999999999542 333 444445667899999999999988877
Q ss_pred HhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhcCCCcccEEEeecccCcccEEEecHHHH-HHHHHHHHHHHHHHHHHHH
Q 002367 280 FNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQKF-EELCEDLWERSLVPLREVL 358 (930)
Q Consensus 280 f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~i~ie~l~~~~d~~~~ItR~ef-e~l~~~~~~~i~~~i~~~L 358 (930)
+... . ++. ...++ . ...+.+ .+. .+++++| +++++++++++.+.|+++|
T Consensus 241 ~g~~--~--~i~---------~~~~e-------~--~~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l 290 (346)
T 2fsj_A 241 TGFV--V--PFD---------LAQEA-------L--SHPVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNL 290 (346)
T ss_dssp HCCC--C--CHH---------HHHHH-------T--TSCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCC--c--CCC---------HHHHh-------c--CCeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5320 0 211 11122 1 112332 232 3569999 9999999999999999999
Q ss_pred HHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCcc-CCCCCcchhhhcccHHHHh
Q 002367 359 NYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTEL-DRHLDADEAIVLGASLLAA 415 (930)
Q Consensus 359 ~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i-~~~~n~deaVa~GAa~~aa 415 (930)
+.+ .++++.|+|+||++++ |++.|++.|+...+ ....||++|+|+|+..++.
T Consensus 291 ~~~---~~~i~~IvL~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 291 RGE---VDRVTSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp GGG---GGGEEEEEEESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred Hhh---hhcccEEEEECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 876 5678999999999999 99999999985332 2266999999999998765
No 14
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.92 E-value=5.2e-25 Score=249.89 Aligned_cols=309 Identities=17% Similarity=0.201 Sum_probs=196.2
Q ss_pred CccEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceEEEEEeCCcEEEcHhHHhhHhhCccchHhHhhhhhCCCc
Q 002367 23 QSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPF 102 (930)
Q Consensus 23 ~~~vvGIDfGTt~s~va~~~~~~g~~~v~iv~n~~~~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~ 102 (930)
...++|||+||++++++++ ..| .+.+ +..|.+.+|+.+ +.++ ...++..+...+|+++++..
T Consensus 12 ~~~~vgiDiGt~~i~~~~~--~~~--~~~i--~~~g~~~~ps~~-~~~g-----------~i~d~~~~~~~ik~~~~~~~ 73 (377)
T 2ych_A 12 RVEALGLEIGASALKLVEV--SGN--PPAL--KALASRPTPPGL-LMEG-----------MVAEPAALAQEIKELLLEAR 73 (377)
T ss_dssp CCCCEEEEECSSEEEEEEE--ETT--TTEE--EEEEEEECCTTS-EETT-----------EESCHHHHHHHHHHHHHHHT
T ss_pred CCceEEEEeCCCeEEEEEE--eCC--ceEE--EEEEeEECCCCc-ccCC-----------CcCCHHHHHHHHHHHHHHcC
Confidence 4468999999999999988 544 2223 233445556532 1222 24567778888888887510
Q ss_pred hhhHhhHhhcCCCceEEECCCCceE-EEeCCCceecHHHHHHHHHHHHHHHHHHhccCccccEEEeeCCCCCHHH-----
Q 002367 103 KQVKHLIDSLYLPFNVVEDSRGAVS-FKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAE----- 176 (930)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~eel~a~~L~~lk~~a~~~~~~~~~~~VItVPa~f~~~q----- 176 (930)
. ....-.+.-+.+.+. ..+. ...++++++-.. ++..++.+++.++.++||.+|. .+.+
T Consensus 74 --------~-~~~~v~~~i~~~~~~~~~~~-~~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~ 137 (377)
T 2ych_A 74 --------T-RKRYVVTALSNLAVILRPIQ-VPKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAP--LTPLSEVQE 137 (377)
T ss_dssp --------C-CCCEEEEEECGGGCEEEEEE-EECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEE--SSCGGGSCT
T ss_pred --------C-CcceEEEEecCCcEEEEEEE-CCCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEE--eCCCCCCCC
Confidence 0 000001111111111 1111 124778877654 3345677888889999999983 3332
Q ss_pred ---------------HHHHHHHHHHcCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEEEeecccc
Q 002367 177 ---------------RKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAK 241 (930)
Q Consensus 177 ---------------R~al~~Aa~~AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~ 241 (930)
.+++.+|++.|||++..++.||+|||++|+.... ...+..++|||+||||||+++++
T Consensus 138 ~~~~~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~-~~~~~~~~vvDiGggttdi~i~~------- 209 (377)
T 2ych_A 138 GEQVQVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLA-EEPDRVFLVLDIGAESTSLVLLR------- 209 (377)
T ss_dssp TSEEEEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHH-TSTTCEEEEEEECSSCEEEEEEE-------
T ss_pred cceeEEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcc-cccCCeEEEEEECCCcEEEEEEE-------
Confidence 3889999999999999999999999999875331 12346899999999999999994
Q ss_pred cccceeccceEEEEEecCCCCcchHHHHHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhcCCCcccEEE
Q 002367 242 VYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISV 321 (930)
Q Consensus 242 ~~g~~~~~~~~~vl~~~~d~~lGG~~~D~~L~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~i~i 321 (930)
.+.+. ..++..+||.+||+.|++.+ +.+ +.+||++|+.++.........
T Consensus 210 -------~g~~~---~~~~~~~GG~~i~~~i~~~~----------~~~-----------~~~aE~~K~~~~~~~~~~~~~ 258 (377)
T 2ych_A 210 -------GDKPL---AVRVLTLSGKDFTEAIARSF----------NLD-----------LLAAEEVKRTYGMATLPTEDE 258 (377)
T ss_dssp -------TTEEE---EEEEESCSHHHHHHHHHHHT----------TCC-----------HHHHHHHHHHTC---------
T ss_pred -------CCEEE---EEEeeechHHHHHHHHHHHh----------CCC-----------HHHHHHHHhhccccccccccc
Confidence 23222 23446899999999998732 222 468899999887543211111
Q ss_pred eecccCcccEEEecHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCC
Q 002367 322 ESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNY--SGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRH 399 (930)
Q Consensus 322 e~l~~~~d~~~~ItR~efe~l~~~~~~~i~~~i~~~L~~--a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~ 399 (930)
+..++-.+....++|++|+++++++++++...|.++|+. +++....++.|+|+||++++|.|++.|++.|+. ++...
T Consensus 259 ~~~i~~~~~~~~i~~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~-~v~~~ 337 (377)
T 2ych_A 259 ELLLDFDAERERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGV-NLEPV 337 (377)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTS-EEEEC
T ss_pred ccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCC-CeEec
Confidence 111111123458999999999999999999999999985 456667899999999999999999999999985 33222
Q ss_pred CCcchhh
Q 002367 400 LDADEAI 406 (930)
Q Consensus 400 ~n~deaV 406 (930)
||+++|
T Consensus 338 -~P~~~v 343 (377)
T 2ych_A 338 -NPWEAV 343 (377)
T ss_dssp -CGGGGS
T ss_pred -Cchhhc
Confidence 554443
No 15
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.92 E-value=6.4e-24 Score=229.75 Aligned_cols=202 Identities=18% Similarity=0.273 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHHHHHhccCccccEEEeeCCCCCHHHHHHHHHHHHHcCCCeeEEechhhHHHHHhccccCCCCCCcEEE
Q 002367 140 ELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVV 219 (930)
Q Consensus 140 el~a~~L~~lk~~a~~~~~~~~~~~VItVPa~f~~~qR~al~~Aa~~AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vl 219 (930)
+....+|+++++.+....+..+..+++++|++|+..+|+++..+++.+|+++..++.||+|+|++|+.. ..+
T Consensus 71 ~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~--------~~~ 142 (272)
T 3h1q_A 71 IGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN--------DGI 142 (272)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS--------SEE
T ss_pred HHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC--------CEE
Confidence 456778899998888887888889999999999999999999999999999999999999999988753 259
Q ss_pred EEEcCCCceEEEEEEEeecccccccceeccceEEEEEecCCCCcchHHHHHHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 002367 220 FYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAK 299 (930)
Q Consensus 220 v~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~~vl~~~~d~~lGG~~~D~~L~~~l~~~f~~~~~~~~d~~~~~~~~~k 299 (930)
|+|+|||||+++++. .+.+. ......+||.+||+.|.+++. .+
T Consensus 143 viDiGggst~~~~~~--------------~g~~~---~~~~~~~Gg~~~~~~l~~~l~----------~~---------- 185 (272)
T 3h1q_A 143 VVDIGGGTTGIAVIE--------------KGKIT---ATFDEPTGGTHLSLVLAGSYK----------IP---------- 185 (272)
T ss_dssp EEEECSSCEEEEEEE--------------TTEEE---EECCBSCCHHHHHHHHHHHHT----------CC----------
T ss_pred EEEECCCcEEEEEEE--------------CCEEE---EEecCCCcHHHHHHHHHHHhC----------CC----------
Confidence 999999999999984 23222 235678999999999988763 11
Q ss_pred HHHHHHHHhhhhcCCCcccEEEeecccCcccEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCC
Q 002367 300 LKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTR 379 (930)
Q Consensus 300 L~~~aek~K~~LS~~~~~~i~ie~l~~~~d~~~~ItR~efe~l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sr 379 (930)
...|+++|+.++ ++.+|++++.++++++...|.+.|+..+ +++.|+|+||+++
T Consensus 186 -~~~ae~~k~~~~----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~ 238 (272)
T 3h1q_A 186 -FEEAETIKKDFS----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAY 238 (272)
T ss_dssp -HHHHHHHHHSST----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGG
T ss_pred -HHHHHHHHHhcC----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccc
Confidence 357888888776 6899999999999999999999998764 4779999999999
Q ss_pred cHHHHHHHHHHhCCCccCCCCCcchhhhcccHHHH
Q 002367 380 VPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLA 414 (930)
Q Consensus 380 iP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~a 414 (930)
+|.+++.|++.|+. ++..+.||++++|+|||++|
T Consensus 239 ~~~l~~~l~~~l~~-~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 239 LTGFSEEFSRFLGK-EVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp STTHHHHHHHHHSS-CCBCCSSGGGHHHHHHHTTC
T ss_pred hhhHHHHHHHHhCC-CccccCChHHHHHHHHHhcC
Confidence 99999999999986 67778999999999999875
No 16
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.91 E-value=8e-25 Score=251.77 Aligned_cols=228 Identities=17% Similarity=0.160 Sum_probs=164.7
Q ss_pred cccEEEeeCCCCCHHHHHHHHHHH-HHcCCCeeEEechhhHHHHH-hccccCCCCCCcEEEEEEcCCCceEEEEEEEeec
Q 002367 161 VKDFVISVPPYFGQAERKGLMQAA-ELAGMNVLSLVNEHSGAALQ-YGIDKDFSNESRHVVFYDMGATTTYAALVYFSAY 238 (930)
Q Consensus 161 ~~~~VItVPa~f~~~qR~al~~Aa-~~AGl~~l~Li~EptAAAl~-y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~ 238 (930)
...+|||+|++|+..+|+++.+++ +.+|++.+.+++||+|||++ |.. ..+.....+.+|||+||||||++++.
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~-~~~~~~~~~glVvDiG~gtt~v~~v~---- 181 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTS-RQVGERTLTGTVIDSGDGVTHVIPVA---- 181 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGS-TTCCSCCCCEEEEEESSSCEEEEEEE----
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcc-cccCCCCCeEEEEEcCCCceEEEEeE----
Confidence 357999999999999999999999 88999999999999999987 532 11111122679999999999999984
Q ss_pred ccccccceeccceEEEEEecCCCCcchHHHHHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhcCCC---
Q 002367 239 NAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANT--- 315 (930)
Q Consensus 239 ~~~~~g~~~~~~~~~vl~~~~d~~lGG~~~D~~L~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~--- 315 (930)
.+. .+.....+..+||++||..|.++|..++ +....... ...++++|+.++...
T Consensus 182 ----------~G~-~~~~~~~~~~lGG~~lt~~l~~~l~~~~-----~~~~~~~~-------~~~~e~iK~~~~~v~~~~ 238 (418)
T 1k8k_A 182 ----------EGY-VIGSCIKHIPIAGRDITYFIQQLLRDRE-----VGIPPEQS-------LETAKAVKERYSYVCPDL 238 (418)
T ss_dssp ----------TTE-ECGGGCEEESCSHHHHHHHHHHHHHTTC-----CCCCGGGH-------HHHHHHHHHHHCCCCSCH
T ss_pred ----------CCE-EcccceEEEeCcHHHHHHHHHHHHHhcC-----CCCCCHHH-------HHHHHHHHHhhchhcccH
Confidence 221 1222224458999999999999997654 22221111 245677777765321
Q ss_pred --------------cccEEEeecccCcccEEEecHHHH---HHHHHHH------HHHHHHHHHHHHHHcC--CCcCCccE
Q 002367 316 --------------MAPISVESLYVDIDFRSSITRQKF---EELCEDL------WERSLVPLREVLNYSG--LKMDEIYA 370 (930)
Q Consensus 316 --------------~~~i~ie~l~~~~d~~~~ItR~ef---e~l~~~~------~~~i~~~i~~~L~~a~--~~~~~I~~ 370 (930)
...+.++....+..+.+.|++++| |.++.|. +..+.++|.++|..+. +....++.
T Consensus 239 ~~e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~ 318 (418)
T 1k8k_A 239 VKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKN 318 (418)
T ss_dssp HHHHHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHC
T ss_pred HHHHHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhc
Confidence 124566655555666889999999 5555543 2568899999999865 44556789
Q ss_pred EEEEcCCCCcHHHHHHHHHHhCCC-----------------------ccCCCCCcchhhhcccHHHHhh
Q 002367 371 VELIGGGTRVPKLQAKLQEYLGRT-----------------------ELDRHLDADEAIVLGASLLAAN 416 (930)
Q Consensus 371 ViLvGG~sriP~V~~~l~~~fg~~-----------------------~i~~~~n~deaVa~GAa~~aa~ 416 (930)
|+|+||+|++|.+++.|++.|+.. ++..+.++..++.+||+++|..
T Consensus 319 IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 319 IVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp EEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred eEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 999999999999999988755421 2233456778999999999874
No 17
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.90 E-value=5.8e-24 Score=240.84 Aligned_cols=307 Identities=14% Similarity=0.165 Sum_probs=193.3
Q ss_pred ccEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceE-EEEEeCCcEEEcHhHHhhHhhCccchHhHhhhhhCCCc
Q 002367 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPA-LVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPF 102 (930)
Q Consensus 24 ~~vvGIDfGTt~s~va~~~~~~g~~~v~iv~n~~~~r~~PS-~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~ 102 (930)
...|+||+||.++++++. ..+ .|.-++.+-.|..+.++ .+.+.....++|.+|.... .. ..+
T Consensus 5 ~~~ivID~Gs~~~k~G~~--~~~-~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~~--~~~-------- 67 (375)
T 2fxu_A 5 TTALVCDNGSGLVKAGFA--GDD-APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----GI--LTL-------- 67 (375)
T ss_dssp CCCEEEEECSSEEEEEET--TCS-SCSEEEECCEEEECTTTC-------CCEEHHHHHHHT----TS--EEE--------
T ss_pred CceEEEECCCCeEEEEEC--CCC-CCceeeccccccccccccccCCCCCCeEechhHhhcC----cc--cce--------
Confidence 457999999999999987 333 44434333322222221 1122224557888776430 00 000
Q ss_pred hhhHhhHhhcCCCceEEECCCCceEEEeCCCceecHHHHHHHHHHHHHHHHHHhccCc--cccEEEeeCCCCCHHHHHHH
Q 002367 103 KQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLA--VKDFVISVPPYFGQAERKGL 180 (930)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~lk~~a~~~~~~~--~~~~VItVPa~f~~~qR~al 180 (930)
..| +.+|..... +.+..+++|+.. ..++.. ...++||+|++++..+|+++
T Consensus 68 ----------~~P--------------i~~G~i~d~-d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~ 119 (375)
T 2fxu_A 68 ----------KYP--------------IEHGIITNW-DDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREKM 119 (375)
T ss_dssp ----------ECS--------------EETTEECCH-HHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHHH
T ss_pred ----------ecc--------------ccCCcccCH-HHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHHHH
Confidence 111 112221122 233445555542 223332 24599999999999999988
Q ss_pred HHHH-HHcCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEEEeecccccccceeccceEEEEEecC
Q 002367 181 MQAA-ELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRW 259 (930)
Q Consensus 181 ~~Aa-~~AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~~vl~~~~ 259 (930)
.+++ +.+|++.+.+++||+|||++|+. ...+|||+|||||+++.+. .|. .+.....
T Consensus 120 ~e~~fe~~g~~~~~~~~e~~aaa~a~g~--------~~~lVvDiG~gtt~v~~v~--------------~G~-~~~~~~~ 176 (375)
T 2fxu_A 120 TQIMFETFNVPAMYVAIQAVLSLYASGR--------TTGIVLDSGDGVTHNVPIY--------------EGY-ALPHAIM 176 (375)
T ss_dssp HHHHHHTTCCSEEEEEEHHHHHHHHTTC--------SSEEEEEECSSCEEEEEEE--------------TTE-ECGGGCE
T ss_pred HHHHHHhcCcceEEEccchheeeeecCC--------CeEEEEEcCCCceEEeEeE--------------CCE-EeccceE
Confidence 8775 78899999999999999999875 3689999999999998873 332 2222233
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhh----------------cCCCcccEEEee
Q 002367 260 DAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEIL----------------SANTMAPISVES 323 (930)
Q Consensus 260 d~~lGG~~~D~~L~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~L----------------S~~~~~~i~ie~ 323 (930)
...+||++||..|.++|..+. +........ ..++++|+.+ +......+.++
T Consensus 177 ~~~~GG~~lt~~l~~~l~~~~-----~~~~~~~~~-------~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp- 243 (375)
T 2fxu_A 177 RLDLAGRDLTDYLMKILTERG-----YSFVTTAER-------EIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP- 243 (375)
T ss_dssp EESCCHHHHHHHHHHHHHHHT-----CCCCSHHHH-------HHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT-
T ss_pred EeccCHHHHHHHHHHHHHhcC-----CCCCcHHHH-------HHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC-
Confidence 458999999999999998762 222111111 2334444443 22222333332
Q ss_pred cccCcccEEEecHHHHH---HHHHHH-----HHHHHHHHHHHHHHcC--CCcCCccEEEEEcCCCCcHHHHHHHHHHhCC
Q 002367 324 LYVDIDFRSSITRQKFE---ELCEDL-----WERSLVPLREVLNYSG--LKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (930)
Q Consensus 324 l~~~~d~~~~ItR~efe---~l~~~~-----~~~i~~~i~~~L~~a~--~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~ 393 (930)
++ ..+.|+++.|+ .+++|. ...+.++|.++|..+. +....++.|+|+||+|++|.+++.|.+.++.
T Consensus 244 --dg--~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~ 319 (375)
T 2fxu_A 244 --DG--QVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITA 319 (375)
T ss_dssp --TS--CEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHH
T ss_pred --CC--CEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHH
Confidence 32 25688988884 344442 2457888888888663 2334568899999999999999999987752
Q ss_pred -------CccCCCCCcchhhhcccHHHHh
Q 002367 394 -------TELDRHLDADEAIVLGASLLAA 415 (930)
Q Consensus 394 -------~~i~~~~n~deaVa~GAa~~aa 415 (930)
-++..+.+|+.++++||+++|.
T Consensus 320 ~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 320 LAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp HSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred hCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 1344567899999999999998
No 18
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.90 E-value=1.4e-22 Score=231.43 Aligned_cols=199 Identities=12% Similarity=0.036 Sum_probs=155.8
Q ss_pred HHHHHHHHHHHcCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEEEeecccccccceeccceEEEE
Q 002367 176 ERKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVK 255 (930)
Q Consensus 176 qR~al~~Aa~~AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~~vl 255 (930)
..+.+.+|++.|||++..++.||+|||++|.... .....+++||+||||||+++++ .+.+...
T Consensus 169 ~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~---~~~~gv~vvDiGggttdisi~~--------------~g~~~~~ 231 (419)
T 4a2a_A 169 VYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTP---EKDRGVVVVNLGYNFTGLIAYK--------------NGVPIKI 231 (419)
T ss_dssp HHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHH---HHHHCEEEEEECSSSEEEEEEE--------------TTEEEEE
T ss_pred HHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccc---cccCCEEEEEECCCcEEEEEEE--------------CCEEEEE
Confidence 4578899999999999999999999999986543 2346799999999999999994 3444332
Q ss_pred EecCCCCcchHHHHHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhcCC-----CcccEEEeecccCccc
Q 002367 256 DVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSAN-----TMAPISVESLYVDIDF 330 (930)
Q Consensus 256 ~~~~d~~lGG~~~D~~L~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~-----~~~~i~ie~l~~~~d~ 330 (930)
++..+||++||+.|+..+. . ...+||++|+.++.. ....+.++++.. ..
T Consensus 232 ---~~i~~GG~~it~dIa~~l~----------~-----------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~~--~~ 285 (419)
T 4a2a_A 232 ---SYVPVGMKHVIKDVSAVLD----------T-----------SFEESERLIITHGNAVYNDLKEEEIQYRGLDG--NT 285 (419)
T ss_dssp ---EEESCCHHHHHHHHHHHHT----------C-----------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTTS--CS
T ss_pred ---EecccHHHHHHHHHHHHHC----------C-----------CHHHHHHHHHHhccCcccCCCCceEEEeecCC--cc
Confidence 3468999999999987542 1 146899999998642 345677776542 45
Q ss_pred EEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCC------CcCCccEEEEEcCCCCcHHHHHHHHHHhCCC-ccCC-----
Q 002367 331 RSSITRQKFEELCEDLWERSLVPLREVLNYSGL------KMDEIYAVELIGGGTRVPKLQAKLQEYLGRT-ELDR----- 398 (930)
Q Consensus 331 ~~~ItR~efe~l~~~~~~~i~~~i~~~L~~a~~------~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~-~i~~----- 398 (930)
...|+|++|.+++++.++++...|.+.|+.+++ ....++.|+|+||+|++|.|++.+++.||.. .+..
T Consensus 286 ~~~is~~~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~ 365 (419)
T 4a2a_A 286 IKTTTAKKLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSD 365 (419)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSS
T ss_pred ceEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCC
Confidence 679999999999999999999999999999998 3556899999999999999999999999863 2222
Q ss_pred C----------CCcchhhhcccHHHHhhh
Q 002367 399 H----------LDADEAIVLGASLLAANL 417 (930)
Q Consensus 399 ~----------~n~deaVa~GAa~~aa~l 417 (930)
+ -+|..+++.|.+++++..
T Consensus 366 p~~~~~~~~~~~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 366 RPSIINADEVANDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp SCCCBTCHHHHTCGGGHHHHHTTCC----
T ss_pred chhccCcccccCCchHHHHHHHHHHHhhc
Confidence 1 378889999999988753
No 19
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.87 E-value=1.4e-21 Score=195.33 Aligned_cols=161 Identities=19% Similarity=0.314 Sum_probs=129.8
Q ss_pred CceeEEeecccceeeeecCCcccCCCCceeEEEeCCCCCCcceeEeeeeccc----EEEEEEeecCCCCCCCCCCCceeE
Q 002367 425 RKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKD----FEVSLAYESEDLLPPGATSPVFAK 500 (930)
Q Consensus 425 ~~~~i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~~----~~i~~~y~~~~~~~~~~~~~~i~~ 500 (930)
..+.+.|++|++|||+|.++.+ .+|||+|++||++++.+|++..| +.|.+ |+|++.++. +|..||+
T Consensus 18 ~~f~l~DV~P~slGie~~gg~~-------~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~V-yqGE~~~~~--dn~~LG~ 87 (182)
T 3n8e_A 18 LYFQSMDVTPLSLGIETLGGVF-------TKLINRNTTIPTKKSQVFSTAADGQTQVEIKV-CQGEREMAG--DNKLLGQ 87 (182)
T ss_dssp ------CBCSSCEEEECTTSBE-------EEEECTTCBSSEEEEEEECCSSTTCCCEEEEE-EESSCSBGG--GSEEEEE
T ss_pred CCEEEEEecCCEEEEEEeCCEE-------EEEEeCCCccCEEEEEEEEECCCCccEEEEEE-EEcCccccc--cCceEEE
Confidence 6788999999999999988755 38999999999999999988655 99999 999988875 6899999
Q ss_pred EEEcCCccchhhhccCCCCCCceeEEEEEEccCcceEEeeeeeEEEEEEeeecCccccccccccCCCCCCchhhhhhccc
Q 002367 501 YAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMT 580 (930)
Q Consensus 501 ~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~a~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (930)
|.|.||++++. | .| +|+|+|.+|.||+|+|+..+.- +
T Consensus 88 f~l~gipp~p~-----G--~~-~IeVtf~iD~nGiL~VsA~d~~-------------------------------t---- 124 (182)
T 3n8e_A 88 FTLIGIPPAPR-----G--VP-QIEVTFDIDANGIVHVSAKDKG-------------------------------T---- 124 (182)
T ss_dssp EEECCCCCCCT-----T--CS-CEEEEEEECTTCCEEEEEEETT-------------------------------T----
T ss_pred EEEcCCCCCCC-----C--Ce-eEEEEEEEecCCEEEEEEEEcC-------------------------------C----
Confidence 99999998753 3 56 8999999999999988644300 0
Q ss_pred cccccccccCCCCCCCCCchhhhhhcCCCCCCCCCchhhhhhhccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHH
Q 002367 581 VEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLE 660 (930)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~l~~~~~~~~~~~~ls~~~l~~~~~~l~ 660 (930)
. .+..+.|.. ...||+++++++.+..+
T Consensus 125 ---------------g---------------------------------~~~~i~I~~-----~~~Ls~eei~~mi~~a~ 151 (182)
T 3n8e_A 125 ---------------G---------------------------------REQQIVIQS-----SGGLSKDDIENMVKNAE 151 (182)
T ss_dssp ---------------C---------------------------------CEEEEEESC-----CCCCCHHHHHHHHHHHH
T ss_pred ---------------C---------------------------------CEeeEEEec-----CccCCHHHHHHHHHHHH
Confidence 0 001345431 13699999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHhHHHHHHhhcc
Q 002367 661 ELDKKDADRRRTAELKNNLEGYIYATKEKFE 691 (930)
Q Consensus 661 ~~~~~D~~~~~~~eakN~LEs~iY~~r~~l~ 691 (930)
++...|++++++.++||.||+|||++|++|+
T Consensus 152 ~~~~eD~~~~~~~e~kn~le~~iy~~~~~l~ 182 (182)
T 3n8e_A 152 KYAEEDRRKKERVEAVNMAEGIIHDTETKME 182 (182)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHCCSCCCC
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999998874
No 20
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.83 E-value=1.2e-20 Score=208.88 Aligned_cols=228 Identities=13% Similarity=0.115 Sum_probs=148.2
Q ss_pred ceecHHHHHHHHHHHHHHHHHHhccCccccEEEeeCCC-CCHH--HH--HHHHHH------------HHHcCCCeeEEec
Q 002367 134 NNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPY-FGQA--ER--KGLMQA------------AELAGMNVLSLVN 196 (930)
Q Consensus 134 ~~~~~eel~a~~L~~lk~~a~~~~~~~~~~~VItVPa~-f~~~--qR--~al~~A------------a~~AGl~~l~Li~ 196 (930)
..+++..+++.+ +.|+. +. ..+.++ .+|+++|.. |... || .++.+- ++.+++..+.++.
T Consensus 72 ~~~~~~~l~~i~-~aL~~-~~-~~~~~~-~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 147 (320)
T 2zgy_A 72 WQYSDVNVVAVH-HALLT-SG-LPVSEV-DIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMP 147 (320)
T ss_dssp GGGSHHHHHHHH-HHHHH-HS-CCSCEE-EEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEE
T ss_pred ccchHHHHHHHH-HHHHH-cC-CCCceE-EEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEec
Confidence 357777777653 44443 21 122233 699999987 6541 22 222211 2334566789999
Q ss_pred hhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEEEeecccccccceeccceEEEEEecCCCCcchHHHHHHHHHHH
Q 002367 197 EHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYF 276 (930)
Q Consensus 197 EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~~vl~~~~d~~lGG~~~D~~L~~~l 276 (930)
||.|||++|.... .++..++|+|+||||||+++++ .+.+.+.+..++..+||.+||+.|++++
T Consensus 148 e~~aa~~~~~~~~---~~~~~~~vvDiGggttd~~v~~--------------~g~~~v~~~~~~~~lGg~~~~~~I~~~l 210 (320)
T 2zgy_A 148 ESIPAGYEVLQEL---DELDSLLIIDLGGTTLDISQVM--------------GKLSGISKIYGDSSLGVSLVTSAVKDAL 210 (320)
T ss_dssp SSHHHHHHHHHHS---CTTCEEEEEEECSSCEEEEEEE--------------GGGCCEEEEEEECSCCTHHHHHHHHHHT
T ss_pred CcHHHHHhhhccc---cCCCCEEEEEcCCCeEEEEEEe--------------CCeeEEeeecCCccccHHHHHHHHHHHH
Confidence 9999999886432 2357899999999999999994 3444566666778999999999999988
Q ss_pred HHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH-hhhhcCCCcccEEEeecccCcccEEEecHHHHHHHHHHHHHHHHHHHH
Q 002367 277 ADEFNKQVGNGVDVRKSPKAMAKLKKQVKRT-KEILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLR 355 (930)
Q Consensus 277 ~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~-K~~LS~~~~~~i~ie~l~~~~d~~~~ItR~efe~l~~~~~~~i~~~i~ 355 (930)
.++ +.++ .. ..++++ |.. ... .+....+...-.++++.+++.+.++.+...|.
T Consensus 211 ~~~-------~~~i--~~-------~~ae~~lk~~---~~~-------~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~i~ 264 (320)
T 2zgy_A 211 SLA-------RTKG--SS-------YLADDIIIHR---KDN-------NYLKQRINDENKISIVTEAMNEALRKLEQRVL 264 (320)
T ss_dssp TCC-------SBGG--GH-------HHHHHHHHTT---TCH-------HHHHHHSSSSCTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHc-------CCCC--CH-------HHHHHHHHHh---hhh-------hcccceecCchhhHHHHHHHHHHHHHHHHHHH
Confidence 632 1222 11 123333 322 000 00000000011345666666666666666666
Q ss_pred HHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCC--ccCCCCCcchhhhcccHHHH
Q 002367 356 EVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRT--ELDRHLDADEAIVLGASLLA 414 (930)
Q Consensus 356 ~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~--~i~~~~n~deaVa~GAa~~a 414 (930)
+.+++. .+++.|+|+||++++ |++.|++.|+.. ++....||++|+|+||+++|
T Consensus 265 ~~i~~~----~~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 265 NTLNEF----SGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp HHHTTC----CCCCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred HHHHhh----cCCCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 666542 578999999999997 999999999863 46678899999999999875
No 21
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.74 E-value=1.4e-17 Score=162.24 Aligned_cols=147 Identities=21% Similarity=0.361 Sum_probs=120.4
Q ss_pred EEeecccceeeeecCCcccCCCCceeEEEeCCCCCCcceeEeeeeccc----EEEEEEeecCCCCCCCCCCCceeEEEEc
Q 002367 429 MVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKD----FEVSLAYESEDLLPPGATSPVFAKYAVS 504 (930)
Q Consensus 429 i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~~----~~i~~~y~~~~~~~~~~~~~~i~~~~i~ 504 (930)
+.|++||++||+|.++.+ .+|||+|++||++++.+|++..| +.|.+ |+|++.++. +|..||+|.|.
T Consensus 2 ~~Dv~p~slGi~~~gg~~-------~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~V-yqGe~~~~~--dn~~LG~f~l~ 71 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVM-------TPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKV-YEGERAMSK--DNNLLGKFELT 71 (152)
T ss_dssp -CCBCSSCEEEEETTTEE-------EEEECTTCBSSEEEEEEECCSSTTCCCEEEEE-EESSCSBGG--GSEEEEEEEEC
T ss_pred ccceeccEEEEEEcCCEE-------EEEEECcCccCEEEEEEEEeCCCCcceeeeeE-EEcCccccc--cCcEEEEEEEe
Confidence 579999999999988765 38999999999999999988654 79999 999988875 68999999999
Q ss_pred CCccchhhhccCCCCCCceeEEEEEEccCcceEEeeeeeEEEEEEeeecCccccccccccCCCCCCchhhhhhccccccc
Q 002367 505 GLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEAN 584 (930)
Q Consensus 505 ~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~a~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (930)
|+++++. | .| +|+|+|++|.||+|+|+..+.- +
T Consensus 72 gipp~p~-----G--~~-~I~Vtf~iD~nGiL~V~a~d~~-------------------------------t-------- 104 (152)
T 3h0x_A 72 GIPPAPR-----G--VP-QIEVTFALDANGILKVSATDKG-------------------------------T-------- 104 (152)
T ss_dssp CCCCCCT-----T--CS-CEEEEEEECTTSEEEEEEEETT-------------------------------T--------
T ss_pred CCCCCCC-----C--Cc-eEEEEEEEcCCCEEEEEEEEcC-------------------------------C--------
Confidence 9998753 3 56 8999999999999988755310 0
Q ss_pred cccccCCCCCCCCCchhhhhhcCCCCCCCCCchhhhhhhccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHHHHHH
Q 002367 585 ENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDK 664 (930)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~l~~~~~~~~~~~~ls~~~l~~~~~~l~~~~~ 664 (930)
. .+..+.|... ...||+++++++.+..++|..
T Consensus 105 -----------g---------------------------------~~~~i~I~~~----~~~ls~~ei~~~~~~a~~~~~ 136 (152)
T 3h0x_A 105 -----------G---------------------------------KSESITITND----KGRLTQEEIDRMVEEAEKFAS 136 (152)
T ss_dssp -----------C---------------------------------CEEEEEEECC----TTCCCHHHHHHHHHHHHHTHH
T ss_pred -----------C---------------------------------cEeEEEEecC----CCCCCHHHHHHHHHHHHHHHH
Confidence 0 0014555421 235999999999999999999
Q ss_pred HHHHHHHHHHHHHhHH
Q 002367 665 KDADRRRTAELKNNLE 680 (930)
Q Consensus 665 ~D~~~~~~~eakN~LE 680 (930)
.|++.+++.++||.||
T Consensus 137 ~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 137 EDASIKAKVESRNKLE 152 (152)
T ss_dssp HHHHHHHHHHCSCCCC
T ss_pred hhHHHHHHHHHHhhcC
Confidence 9999999999999997
No 22
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.72 E-value=9.2e-19 Score=199.22 Aligned_cols=215 Identities=15% Similarity=0.171 Sum_probs=89.0
Q ss_pred ccEEEeeCCCCCHHHHHHHHHHH-HHcCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEEEeeccc
Q 002367 162 KDFVISVPPYFGQAERKGLMQAA-ELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNA 240 (930)
Q Consensus 162 ~~~VItVPa~f~~~qR~al~~Aa-~~AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~ 240 (930)
..++||+|++++..+|+++.+++ +.+|++.+.++++|.|||++++. ...+|+|+|+|+|+++.+.
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~--------~~~lVVDiG~g~T~v~pv~------ 170 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL--------LTGVVVDSGDGVTHICPVY------ 170 (394)
T ss_dssp ---------------------------------------------------------CCEEEECSSCEEEECEE------
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC--------ceEEEEEcCCCceEeeeeE------
Confidence 35999999999999999999865 77899999999999999988864 3579999999999998873
Q ss_pred ccccceeccceEEEEEecCCCCcchHHHHHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhcCCC-----
Q 002367 241 KVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANT----- 315 (930)
Q Consensus 241 ~~~g~~~~~~~~~vl~~~~d~~lGG~~~D~~L~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~----- 315 (930)
.|.+ +........+||++||..|.++|..+- +........ ..++++|+.+..-.
T Consensus 171 --------~G~~-~~~~~~~~~~GG~~lt~~l~~~l~~~~-----~~~~~~~~~-------~~ae~iK~~~~~v~~d~~~ 229 (394)
T 1k8k_B 171 --------EGFS-LPHLTRRLDIAGRDITRYLIKLLLLRG-----YAFNHSADF-------ETVRMIKEKLCYVGYNIEQ 229 (394)
T ss_dssp --------TTEE-CSTTCEEESCCHHHHHHHHHHHHHHTT-----CCCCTTTTH-------HHHHHHHHHHCCCCSSHHH
T ss_pred --------CCEE-cccceEEeeccHHHHHHHHHHHHHhcC-----CCCCcHHHH-------HHHHHHHHhheeEecCHHH
Confidence 2321 111112348999999999999997641 222111121 23455555443211
Q ss_pred -----------cccEEEeecccCcccEEEecHHHHH---HHHHHH-----HHHHHHHHHHHHHHcCCC--cCCccEEEEE
Q 002367 316 -----------MAPISVESLYVDIDFRSSITRQKFE---ELCEDL-----WERSLVPLREVLNYSGLK--MDEIYAVELI 374 (930)
Q Consensus 316 -----------~~~i~ie~l~~~~d~~~~ItR~efe---~l~~~~-----~~~i~~~i~~~L~~a~~~--~~~I~~ViLv 374 (930)
...+.+ .++. .+.|+++.|. .|++|. ...|.+.|.++|..+... ..-++.|+|+
T Consensus 230 ~~~~~~~~~~~~~~~~l---pdg~--~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLt 304 (394)
T 1k8k_B 230 EQKLALETTVLVESYTL---PDGR--IIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLS 304 (394)
T ss_dssp HHHHHHHCSTTCEEEEC---TTSC--EEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEE
T ss_pred HHHhhccCCcCceEEEC---CCCC--EEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEe
Confidence 111222 2332 4678888773 333331 234778888888887432 3345789999
Q ss_pred cCCCCcHHHHHHHHHHhCC---------------C---ccCCCCCcchhhhcccHHHHhh
Q 002367 375 GGGTRVPKLQAKLQEYLGR---------------T---ELDRHLDADEAIVLGASLLAAN 416 (930)
Q Consensus 375 GG~sriP~V~~~l~~~fg~---------------~---~i~~~~n~deaVa~GAa~~aa~ 416 (930)
||+|++|.+.+.|++.++. . ++..+.++..++.+||+++|..
T Consensus 305 GG~s~~~G~~~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 305 GGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp SGGGCSTTHHHHHHHHHHHHHHHHTCSSCCCTTCCCCC----------------------
T ss_pred CcccccccHHHHHHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 9999999999998876642 1 2233456778999999998873
No 23
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.72 E-value=2.2e-17 Score=160.56 Aligned_cols=147 Identities=18% Similarity=0.374 Sum_probs=116.9
Q ss_pred EEeecccceeeeecCCcccCCCCceeEEEeCCCCCCcceeEeeeeccc----EEEEEEeecCCCCCCCCCCCceeEEEEc
Q 002367 429 MVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKD----FEVSLAYESEDLLPPGATSPVFAKYAVS 504 (930)
Q Consensus 429 i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~~----~~i~~~y~~~~~~~~~~~~~~i~~~~i~ 504 (930)
+.|++||++||+|.++.+ .+|||+|++||++++.+|++..| +.|.+ |+|++.++. +|..||+|.|.
T Consensus 2 ~~Dv~p~slGie~~gg~~-------~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~V-yqGe~~~~~--dn~~LG~f~l~ 71 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVM-------TNLIDRNTRIPTKACKTFTTYADNQPGVSIQV-YEGERAMTR--DNHRLGTFELS 71 (152)
T ss_dssp --CBCSSCEEEEETTTEE-------EEEECTTCBSSEEEEEEEEESSTTCCEEEEEE-EESSCSBGG--GSEEEEEEEEE
T ss_pred ceeeecceEEEEEcCCEE-------EEEEECcCccCEEEEEEEEECCCCceEEEEEE-EEcCccccc--cCceeEEEEEe
Confidence 579999999999988765 38999999999999999998654 78888 999988865 68999999999
Q ss_pred CCccchhhhccCCCCCCceeEEEEEEccCcceEEeeeeeEEEEEEeeecCccccccccccCCCCCCchhhhhhccccccc
Q 002367 505 GLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEAN 584 (930)
Q Consensus 505 ~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~a~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (930)
|+++++. | .| +|+|+|++|.||+|+|+..+.- +
T Consensus 72 gipp~p~-----G--~~-~IeVtf~iD~nGiL~Vsa~d~~-------------------------------t-------- 104 (152)
T 3dob_A 72 GIPPAPR-----G--VP-QIEVTFNIDANGILNVSAEDKS-------------------------------T-------- 104 (152)
T ss_dssp CCCCCCT-----T--CC-CEEEEEEECTTCCEEEEEEETT-------------------------------T--------
T ss_pred CCCCCCC-----C--Cc-eEEEEEEeCCCCeEEEEEEEcC-------------------------------C--------
Confidence 9998753 3 46 8999999999999988654300 0
Q ss_pred cccccCCCCCCCCCchhhhhhcCCCCCCCCCchhhhhhhccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHHHHHH
Q 002367 585 ENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDK 664 (930)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~l~~~~~~~~~~~~ls~~~l~~~~~~l~~~~~ 664 (930)
. ....+.|.. ....||+++++++.+..+++..
T Consensus 105 -----------g---------------------------------~~~~i~I~~----~~~~Ls~~ei~~~~~~a~~~~~ 136 (152)
T 3dob_A 105 -----------G---------------------------------KSNRITIQN----EKGRLTQSDIDRMVHEAKQFEK 136 (152)
T ss_dssp -----------C---------------------------------CEEEEEECC----C----CHHHHHHHHHHHHHTHH
T ss_pred -----------C---------------------------------CEEEEEEEc----CCCCCCHHHHHHHHHHHHHHHH
Confidence 0 001344431 1225999999999999999999
Q ss_pred HHHHHHHHHHHHHhHH
Q 002367 665 KDADRRRTAELKNNLE 680 (930)
Q Consensus 665 ~D~~~~~~~eakN~LE 680 (930)
.|++.+++.++||.||
T Consensus 137 ~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 137 EDGEQRERVQARNQLE 152 (152)
T ss_dssp HHHHHHHTCCCCSEEC
T ss_pred hhHHHHHHHHHHhhcC
Confidence 9999999999999987
No 24
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.70 E-value=1.6e-17 Score=161.38 Aligned_cols=146 Identities=18% Similarity=0.340 Sum_probs=119.2
Q ss_pred EEeecccceeeeecCCcccCCCCceeEEEeCCCCCCcceeEeeeeccc----EEEEEEeecCCCCCCCCCCCceeEEEEc
Q 002367 429 MVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKD----FEVSLAYESEDLLPPGATSPVFAKYAVS 504 (930)
Q Consensus 429 i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~~----~~i~~~y~~~~~~~~~~~~~~i~~~~i~ 504 (930)
+.|++||++||+|.++.+. +|||+|++||++++.+|++..| +.|.+ |+|++.++. +|..||+|.|.
T Consensus 2 ~~DV~p~slGie~~gg~~~-------~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~V-yqGe~~~~~--dn~~LG~f~l~ 71 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMT-------KLITRNTTIPTKKSQVFSTAADGQTQVQIKV-FQGEREMAT--SNKLLGQFSLV 71 (151)
T ss_dssp --CBCSSCEEEEETTTEEE-------EEECTTCBSSEEEEEEEEESSTTCCEEEEEE-EESSCSBGG--GSEEEEEEEEE
T ss_pred cceeeeeEEEEEEcCCEEE-------EEEECcCccCEEEEEEEEECCCCcceEEEEE-EEcCCcccc--cCcEEEEEEEe
Confidence 5799999999999887653 8999999999999999998654 89999 999988875 68999999999
Q ss_pred CCccchhhhccCCCCCCceeEEEEEEccCcceEEeeeeeEEEEEEeeecCccccccccccCCCCCCchhhhhhccccccc
Q 002367 505 GLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEAN 584 (930)
Q Consensus 505 ~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~a~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (930)
|+++++. | .| +|+|+|++|.||+|+|+..+.- +
T Consensus 72 gipp~p~-----G--~~-~IeVtf~iD~nGiL~Vsa~d~~-------------------------------t-------- 104 (151)
T 3dqg_A 72 GIPPAPR-----G--VP-QVEVTFDIDANGIVNVSARDRG-------------------------------T-------- 104 (151)
T ss_dssp CCCCCCT-----T--CS-CEEEEEEECTTSEEEEEEEETT-------------------------------T--------
T ss_pred CCCCCCC-----C--Cc-EEEEEEEeccCcEEEEEEEEcc-------------------------------C--------
Confidence 9998753 3 56 8999999999999988654300 0
Q ss_pred cccccCCCCCCCCCchhhhhhcCCCCCCCCCchhhhhhhccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHHHHHH
Q 002367 585 ENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDK 664 (930)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~l~~~~~~~~~~~~ls~~~l~~~~~~l~~~~~ 664 (930)
. ....+.|.. ...||+++++++.+..+++..
T Consensus 105 -----------g---------------------------------~~~~i~I~~-----~~~Ls~~ei~~~~~~a~~~~~ 135 (151)
T 3dqg_A 105 -----------G---------------------------------KEQQIVIQS-----SGGLSKDQIENMIKEAEKNAA 135 (151)
T ss_dssp -----------C---------------------------------CEEEEEEEC-----SSSSCHHHHHHHHHHHHHHHH
T ss_pred -----------C---------------------------------CEeEEEEec-----CCCCCHHHHHHHHHHHHHHHH
Confidence 0 001455542 136999999999999999999
Q ss_pred HHHHHHHHHHHHHhHH
Q 002367 665 KDADRRRTAELKNNLE 680 (930)
Q Consensus 665 ~D~~~~~~~eakN~LE 680 (930)
.|++.+++.++||.||
T Consensus 136 ~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 136 EDAKRKELVEVINQAE 151 (151)
T ss_dssp HHTTCCCEEECBCCCC
T ss_pred HhHHHHHHHHHHhhcC
Confidence 9999999999999986
No 25
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.70 E-value=2e-17 Score=179.07 Aligned_cols=183 Identities=12% Similarity=0.061 Sum_probs=124.1
Q ss_pred HcCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEEEeecccccccceeccceEEEEEecCCCCcch
Q 002367 186 LAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGG 265 (930)
Q Consensus 186 ~AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~~vl~~~~d~~lGG 265 (930)
+++..++..|||++|+|+++.... +....|+|+|||+++++++. ..+.+.+...+++...||
T Consensus 68 ~a~~~~~~~Vne~~aha~a~~~~~-----~~~~~vl~lgG~~~~~~~~~-------------~~g~~~~~~~~~~~~~g~ 129 (276)
T 4ehu_A 68 MNYSDADKQISELSCHARGVNFII-----PETRTIIDIGGQDAKVLKLD-------------NNGRLLNFLMNDKCAAGT 129 (276)
T ss_dssp GGCCSCSEECCHHHHHHHHHHHHS-----TTCCEEEEECSSCEEEEEEC-------------TTSCEEEEEEECSCSTTS
T ss_pred HHhhCCCcccchHHHHHHHHHHhC-----CCCCeEEEEcCCCceEEEEE-------------ecCceEEEEeCCCcCcch
Confidence 367778899999999998876543 23457899999999999983 156778888889999999
Q ss_pred HHHHHHHHHHHHHHHhhh------cCCCCCCCCcHHHHHHHHHHHHHHhhhhcCCCcccEEEeecccCcccEEEecHHHH
Q 002367 266 QNMELRLVEYFADEFNKQ------VGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQKF 339 (930)
Q Consensus 266 ~~~D~~L~~~l~~~f~~~------~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~i~ie~l~~~~d~~~~ItR~ef 339 (930)
.+|+..++++|.-.|... .....++........+. .++..+ .. ....
T Consensus 130 G~f~d~~a~~l~~~~~~~~~~~~~a~~~~~i~~~~~~f~~s-----~~~~~~-------------~~---------~~~~ 182 (276)
T 4ehu_A 130 GRFLDVMAKIIEVDVSELGSISMNSQNEVSISSTCTVFAES-----EVISHL-------------SE---------NAKI 182 (276)
T ss_dssp HHHHHHHHHHHTCCGGGHHHHHTTCSSCCCCCCCSHHHHHH-----HHHHHH-------------HT---------TCCH
T ss_pred hhHHHHHHHHhccChhhhHHHHhcCCCCCCcCCccchhhhh-----HHHHhh-------------hc---------cccH
Confidence 999999998886444321 00000110000000000 000000 00 1113
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHHHhhhc
Q 002367 340 EELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLS 418 (930)
Q Consensus 340 e~l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~aa~ls 418 (930)
++++..++..+.+.+.....+. ..++.|+|+||.+++|.|++.|++.||. ++..+.||++++|+|||++|....
T Consensus 183 ~di~a~~~~~v~~~l~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~g~-~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 183 EDIVAGIHTSVAKRVSSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREINT-EIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHHTS-CEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhc----ccCCeEEEecCccchHHHHHHHHHHHCC-CeeeCCCcchHHHHHHHHHHHHHH
Confidence 4566666666665555544443 3567899999999999999999999986 677889999999999999997644
No 26
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.68 E-value=1.5e-16 Score=155.71 Aligned_cols=147 Identities=21% Similarity=0.338 Sum_probs=118.8
Q ss_pred EEeecccceeeeecCCcccCCCCceeEEEeCCCCCCcceeEeeeeccc----EEEEEEeecCCCCCCCCCCCceeEEEEc
Q 002367 429 MVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKD----FEVSLAYESEDLLPPGATSPVFAKYAVS 504 (930)
Q Consensus 429 i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~~----~~i~~~y~~~~~~~~~~~~~~i~~~~i~ 504 (930)
+.|++||+|||++.++.+ .+||++|++||++++.+|.+..| +.|.+ |+|++.++. +|..||+|.|.
T Consensus 2 v~Dv~p~slGi~~~~g~~-------~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v-~qGe~~~~~--~n~~lg~~~l~ 71 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVM-------TKLIGRNTVIPTKKSQVFSTAADSQSAVSIVI-YEGERPMVM--DNHKLGNFDVT 71 (152)
T ss_dssp -CCBCSSCEEEEETTTEE-------EEEECTTCBSSEEEEEEEEESSTTCCCEEEEE-EESSCSBGG--GSEEEEEEEEC
T ss_pred ceEeecccEEEEEeCCEE-------EEEEeCCCcccEeEEEEEEeCCCCCcEEEEEE-EEeCCccCc--cCCEeEEEEEE
Confidence 579999999999988655 38999999999999999998765 99999 899887765 58899999999
Q ss_pred CCccchhhhccCCCCCCceeEEEEEEccCcceEEeeeeeEEEEEEeeecCccccccccccCCCCCCchhhhhhccccccc
Q 002367 505 GLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEAN 584 (930)
Q Consensus 505 ~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~a~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (930)
|+++++ +| .| +|+|+|++|.||+|+|...+.. +
T Consensus 72 gipp~p-----~G--~~-~I~V~f~id~nGiL~V~a~d~~-------------------------------t-------- 104 (152)
T 2op6_A 72 GIPPAP-----RG--VP-QIEVTFEIDVNGILHVSAEDKG-------------------------------T-------- 104 (152)
T ss_dssp CCCCCC-----TT--CS-CEEEEEEECTTSCEEEEEEETT-------------------------------T--------
T ss_pred CCCCCC-----CC--Cc-eEEEEEEECCCcEEEEEEEEec-------------------------------C--------
Confidence 998765 23 56 8999999999999987644210 0
Q ss_pred cccccCCCCCCCCCchhhhhhcCCCCCCCCCchhhhhhhccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHHHHHH
Q 002367 585 ENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDK 664 (930)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~l~~~~~~~~~~~~ls~~~l~~~~~~l~~~~~ 664 (930)
. + ...+.|.. ....||+++++++.+.+.+|..
T Consensus 105 -----------g-----------------------------~----~~~i~i~~----~~~~ls~eei~~~~~~~~~~~~ 136 (152)
T 2op6_A 105 -----------G-----------------------------N----KNKLTITN----DHNRLSPEDIERMINDADKFAA 136 (152)
T ss_dssp -----------C-----------------------------C----EEEEEECS----SSSCCCHHHHHHHHHHHHHTHH
T ss_pred -----------C-----------------------------c----EEEEEeec----cccCCCHHHHHHHHHHHHHhHh
Confidence 0 0 01344431 1235999999999999999999
Q ss_pred HHHHHHHHHHHHHhHH
Q 002367 665 KDADRRRTAELKNNLE 680 (930)
Q Consensus 665 ~D~~~~~~~eakN~LE 680 (930)
.|+.++++.++||.||
T Consensus 137 ~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 137 DDQAQKEKVESRNELE 152 (152)
T ss_dssp HHHHHHHHSCCCSEEC
T ss_pred ccHHHHHHHHHHhhcC
Confidence 9999999999999987
No 27
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.67 E-value=1.4e-16 Score=177.91 Aligned_cols=207 Identities=13% Similarity=0.170 Sum_probs=139.0
Q ss_pred cEEEeeCCCCCHHHH-HHHHHHHHHcCC------------CeeEEechhhHHHHHhccccCCCC---CCcEEEEEEcCCC
Q 002367 163 DFVISVPPYFGQAER-KGLMQAAELAGM------------NVLSLVNEHSGAALQYGIDKDFSN---ESRHVVFYDMGAT 226 (930)
Q Consensus 163 ~~VItVPa~f~~~qR-~al~~Aa~~AGl------------~~l~Li~EptAAAl~y~~~~~~~~---~~~~vlv~D~Ggg 226 (930)
.+|+.+|..+...+| +++++++..++- .-+.++.||.||+++|+....... .+..++|+|+|||
T Consensus 115 ~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGgg 194 (355)
T 3js6_A 115 VIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSG 194 (355)
T ss_dssp EEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSS
T ss_pred EEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCC
Confidence 789999999998887 589998875542 356899999999999876531101 3578999999999
Q ss_pred ceEEEEEEEeecccccccceeccceEEEEEecCCCCcchHHHHHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002367 227 TTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKR 306 (930)
Q Consensus 227 T~dvsvv~~~~~~~~~~g~~~~~~~~~vl~~~~d~~lGG~~~D~~L~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek 306 (930)
|||++++. .+.+ +....+...+||..++..|.+++.+++. +..+. .. ..++
T Consensus 195 Ttd~~v~~--------------~~~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~~-----g~~l~--~~-------~i~~ 245 (355)
T 3js6_A 195 TTIIDTYQ--------------NMKR-VEEESFVINKGTIDFYKRIASHVSKKSE-----GASIT--PR-------MIEK 245 (355)
T ss_dssp CEEEEEEE--------------TTEE-CGGGCEEESCCHHHHHHHHHHHTC-------------C--HH-------HHHS
T ss_pred cEEEEEEc--------------CCEE-ccccccCcchHHHHHHHHHHHHHHHhcC-----CCcCC--HH-------HHhc
Confidence 99999982 2211 1111223479999999999999987642 22221 11 1111
Q ss_pred HhhhhcCCCcccEEEeecccCcccEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHH--HH
Q 002367 307 TKEILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPK--LQ 384 (930)
Q Consensus 307 ~K~~LS~~~~~~i~ie~l~~~~d~~~~ItR~efe~l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~--V~ 384 (930)
.+. +.... .+ ..-.+.| .+.+++.+++++++|...|.+.+.+ ++.++.|+|+||++.++. |.
T Consensus 246 g~~---------~~~~~-~~-~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~ 309 (355)
T 3js6_A 246 GLE---------YKQCK-LN-QKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLS 309 (355)
T ss_dssp CCC------------------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHH
T ss_pred CCc---------ccccc-cc-ccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHH
Confidence 111 00000 00 0001122 3456777888888888888888763 467899999999999998 88
Q ss_pred HHHHHHhCCCccCCCCCcchhhhcccHHHHhhhcC
Q 002367 385 AKLQEYLGRTELDRHLDADEAIVLGASLLAANLSD 419 (930)
Q Consensus 385 ~~l~~~fg~~~i~~~~n~deaVa~GAa~~aa~ls~ 419 (930)
+.|++.|+.. .||..|+|+|+..++..+..
T Consensus 310 ~~i~~~~~~~-----~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 310 HYYSDVFEKA-----DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp HHSSSCEECC-----SSGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCC-----CCcHHHHHHHHHHHHHHHHh
Confidence 9998888542 79999999999999988764
No 28
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.47 E-value=2.4e-14 Score=158.52 Aligned_cols=204 Identities=14% Similarity=0.170 Sum_probs=139.0
Q ss_pred ccEEEeeCCCCCH--HHHHHHHHHHHHc--------C------CCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCC
Q 002367 162 KDFVISVPPYFGQ--AERKGLMQAAELA--------G------MNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGA 225 (930)
Q Consensus 162 ~~~VItVPa~f~~--~qR~al~~Aa~~A--------G------l~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~Gg 225 (930)
..+|+++|..+.. .+|+.+++....- | +.-+.++.|+.+|.+.+. .. .+...++|+|+||
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~--~~--~~~~~v~vvDiGg 181 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ--EN--FKNKNVAVIDFGG 181 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC--CC--CTTCEEEEEEECS
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc--hh--hccCCEEEEEeCC
Confidence 4799999998774 3677787765521 1 123678889888887652 21 2457899999999
Q ss_pred CceEEEEEEEeecccccccceeccceEEEEEecCCCCcchHHHHHHHHHHHHH-HHhhhcCCCCCCCCcHHHHHHHHHHH
Q 002367 226 TTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFAD-EFNKQVGNGVDVRKSPKAMAKLKKQV 304 (930)
Q Consensus 226 gT~dvsvv~~~~~~~~~~g~~~~~~~~~vl~~~~d~~lGG~~~D~~L~~~l~~-~f~~~~~~~~d~~~~~~~~~kL~~~a 304 (930)
||||++++. .+.+ +....+...+||.++++.|.+++.+ + ++..+... .+
T Consensus 182 gTtd~~v~~--------------~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~~~------~g~~i~~~---------~~ 231 (329)
T 4apw_A 182 LNMGFSLYR--------------NCVV-NPSERFIEEHGVKDLIIRVGDALTDLN------NGNLITNE---------QA 231 (329)
T ss_dssp SCEEEEEEE--------------TTEE-CGGGCEEESCCHHHHHHHHHTSSSSCS------SCSCTTSB---------TT
T ss_pred CcEEEEEEE--------------CCEE-eeccccchhhHHHHHHHHHHHHHHhhc------cCCCCCHH---------HH
Confidence 999999994 2322 2222234579999999999998876 3 33333221 23
Q ss_pred HHHhhhhcCCCcccEEEeecccCcccEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHH
Q 002367 305 KRTKEILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQ 384 (930)
Q Consensus 305 ek~K~~LS~~~~~~i~ie~l~~~~d~~~~ItR~efe~l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~ 384 (930)
+++|+. . .. ..+.++ ..+..+.+++.+++++++|...|.+. +.+++.++.|+|+||++.+ +.
T Consensus 232 e~i~~~--g--~~-------~~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~ 293 (329)
T 4apw_A 232 ESALNN--G--YM-------KKGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LK 293 (329)
T ss_dssp TTCSSS--C--SS-------CEECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HH
T ss_pred HHHHhc--C--Cc-------ccCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HH
Confidence 333332 1 11 011122 14567778888888888887777665 3555668999999999998 56
Q ss_pred HHHHHHhCCCccCCCCCcchhhhcccHHHHhhhc
Q 002367 385 AKLQEYLGRTELDRHLDADEAIVLGASLLAANLS 418 (930)
Q Consensus 385 ~~l~~~fg~~~i~~~~n~deaVa~GAa~~aa~ls 418 (930)
+.|++.|+. .+...-||..|+|+|+..++....
T Consensus 294 ~~l~~~~~~-~v~v~~~P~~a~a~G~~~~~~~k~ 326 (329)
T 4apw_A 294 EQISKTYPN-NSIITNNSQWTTCEGLYKVAVAKY 326 (329)
T ss_dssp HHHHHHSTT-CEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHcCC-CCEecCCChhhHHHHHHHHHhhhh
Confidence 999999984 455677999999999998876543
No 29
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.31 E-value=2.8e-12 Score=122.16 Aligned_cols=99 Identities=18% Similarity=0.349 Sum_probs=80.7
Q ss_pred CceeEEeecccceeeeecCCcccCCCCceeEEEeCCCCCCcceeEeeeecc----cEEEEEEeecCCCCCCCCCCCceeE
Q 002367 425 RKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAK----DFEVSLAYESEDLLPPGATSPVFAK 500 (930)
Q Consensus 425 ~~~~i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~----~~~i~~~y~~~~~~~~~~~~~~i~~ 500 (930)
+++.+.|++|++|||++.++.+. +||++|+++|++++.+|.+.. .+.|.+ |+|++.++. +|..||+
T Consensus 15 ~d~~l~Dv~p~slGIe~~~g~~~-------~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~V-yqGe~~~~~--~n~~Lg~ 84 (135)
T 1q5l_A 15 RGSHMVDVTPLSLGIETMGGVMT-------TLIAKNTTIPTKHSQVFSTAEDNQSAVTIHV-LQGERKRAA--DNKSLGQ 84 (135)
T ss_dssp ------CCCSSCCCEEETTTEEC-------CSSCSSSCSSBCCEEEECCCSSSCSSCEEEE-EECCSSSCS--SSEEEEE
T ss_pred CcEEEEEeecCcEEEEEECCEEE-------EEEcCCCeEeEeEeEEEEeccCCceEEEEEE-EEeCCcccc--cCcEEEE
Confidence 78899999999999999876553 899999999999999998764 499999 999988776 6899999
Q ss_pred EEEcCCccchhhhccCCCCCCceeEEEEEEccCcceEEeee
Q 002367 501 YAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRA 541 (930)
Q Consensus 501 ~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~a 541 (930)
|.|.|+++++ +| .+ +|+|+|++|.||+|+|+..
T Consensus 85 f~l~gipp~p-----~G--~~-~IeVtf~iD~nGiL~V~a~ 117 (135)
T 1q5l_A 85 FNLDGINPAP-----RG--MP-QIEVTFDIDADGILHVSAK 117 (135)
T ss_dssp EECCCCCSCC-----SS--SC-CEEEEEEECTTSEEEEEEE
T ss_pred EEEeCCCCCC-----Cc--ee-EEEEEEEECCCCEEEEEEE
Confidence 9999998775 23 45 8999999999999988754
No 30
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.30 E-value=2.7e-12 Score=146.52 Aligned_cols=243 Identities=16% Similarity=0.109 Sum_probs=148.3
Q ss_pred HHHHHHHHHHHHHHHhccCc--cccEEEeeCCCCCHHHHHHHHHHH-HHcCCCeeEEechhhHHHHHhccccCCCCCCcE
Q 002367 141 LLAMVLSYAVNLVDTHAKLA--VKDFVISVPPYFGQAERKGLMQAA-ELAGMNVLSLVNEHSGAALQYGIDKDFSNESRH 217 (930)
Q Consensus 141 l~a~~L~~lk~~a~~~~~~~--~~~~VItVPa~f~~~qR~al~~Aa-~~AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~ 217 (930)
.+..+++|+.. ..++.. -..++||.|+..+...|+.+.+.+ +.+|++-+.++.+|.+|+++.+...........
T Consensus 104 ~~e~iw~~~~~---~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~t 180 (427)
T 3dwl_A 104 HMERFWQQSLF---KYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLT 180 (427)
T ss_dssp HHHHHHHHHHH---TTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCC
T ss_pred HHHHHHHHHHh---HhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCce
Confidence 44555555542 233332 246999999999999999999987 778999999999999999887754222222357
Q ss_pred EEEEEcCCCceEEEEEEEeecccccccceeccceEEEEEecCCCCcchHHHHHHHHHHHHHHHhhhcCCCCCCCCcHHHH
Q 002367 218 VVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAM 297 (930)
Q Consensus 218 vlv~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~~vl~~~~d~~lGG~~~D~~L~~~l~~~f~~~~~~~~d~~~~~~~~ 297 (930)
-||+|+|+|+|+++.|.- |....... ....+||+++|..|.++|..+... ...
T Consensus 181 glVVDiG~g~T~v~PV~~--------G~~l~~~~-------~rl~~gG~~lt~~L~~lL~~~~~~--------~~~---- 233 (427)
T 3dwl_A 181 GTVVDSGDGVTHIIPVAE--------GYVIGSSI-------KTMPLAGRDVTYFVQSLLRDRNEP--------DSS---- 233 (427)
T ss_dssp EEEEEESSSCEEEEEEET--------TEECGGGC-------EEESCCHHHHHHHHHHTTC--------------------
T ss_pred EEEEECCCCceEEEEEEC--------CEEehhhh-------eeccccHHHHHHHHHHHHHHcCCC--------chh----
Confidence 899999999999999831 11111111 113799999999999988654311 000
Q ss_pred HHHHHHHHHHhhhhcCCCc-----------ccEEEee--c--ccCcccEEEecHHHH---HHHHHHH------HHHHHHH
Q 002367 298 AKLKKQVKRTKEILSANTM-----------APISVES--L--YVDIDFRSSITRQKF---EELCEDL------WERSLVP 353 (930)
Q Consensus 298 ~kL~~~aek~K~~LS~~~~-----------~~i~ie~--l--~~~~d~~~~ItR~ef---e~l~~~~------~~~i~~~ 353 (930)
...++.+|+.+..-.. ....+.. + .++..+.+.|..+.| |-|++|- ...|.+.
T Consensus 234 ---~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~ 310 (427)
T 3dwl_A 234 ---LKTAERIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPEL 310 (427)
T ss_dssp ---CHHHHHHHHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHH
T ss_pred ---HHHHHHHHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHH
Confidence 1334555555432110 0000110 1 233334567777776 3344441 2357788
Q ss_pred HHHHHHHcCCC--cCCccEEEEEcCCCCcHHHHHHHHHHhC------------------C---CccCCCCCcchhhhccc
Q 002367 354 LREVLNYSGLK--MDEIYAVELIGGGTRVPKLQAKLQEYLG------------------R---TELDRHLDADEAIVLGA 410 (930)
Q Consensus 354 i~~~L~~a~~~--~~~I~~ViLvGG~sriP~V~~~l~~~fg------------------~---~~i~~~~n~deaVa~GA 410 (930)
|.++|..+... ..-...|+|+||+|.+|.+.+.|.+-+. . -++..+.++..++=+|+
T Consensus 311 i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGG 390 (427)
T 3dwl_A 311 VDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGG 390 (427)
T ss_dssp HHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHH
T ss_pred HHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCc
Confidence 88888766432 1223679999999999998888876431 1 12333456677899999
Q ss_pred HHHHhh
Q 002367 411 SLLAAN 416 (930)
Q Consensus 411 a~~aa~ 416 (930)
+++|..
T Consensus 391 Silasl 396 (427)
T 3dwl_A 391 SLLAQT 396 (427)
T ss_dssp HHHHHS
T ss_pred eeeccc
Confidence 999863
No 31
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.29 E-value=3.8e-11 Score=138.44 Aligned_cols=178 Identities=14% Similarity=0.158 Sum_probs=117.2
Q ss_pred CccEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceEEEEEeC----CcEEEcHhHHhhHhhCccchHhHhhhhh
Q 002367 23 QSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHE----STRLLGEEASGIIARYPHRVYSQLRDMI 98 (930)
Q Consensus 23 ~~~vvGIDfGTt~s~va~~~~~~g~~~v~iv~n~~~~r~~PS~V~~~~----~~~~~G~~A~~~~~~~p~~~~~~~K~ll 98 (930)
....|+||+||.++++++. ..+ .|. ..+||+|+... ...+||.++....
T Consensus 22 e~~~iVID~GS~~~kaG~a--g~~-~P~---------~v~PSvVg~~~~~~~~~~~vG~e~~~~~--------------- 74 (498)
T 3qb0_A 22 EVSAVVIDPGSYTTNIGYS--GSD-FPQ---------SILPSVYGKYTADEGNKKIFSEQSIGIP--------------- 74 (498)
T ss_dssp CBSCEEEECCSSEEEEEET--TCS-SCS---------EEEESEEEEESSCSSCCEECCTTGGGSC---------------
T ss_pred CCCeEEEECCCcEEEEEEC--CCC-Cee---------eecCceeEEeccCCCccEEEecHHHhcC---------------
Confidence 3467999999999999987 222 232 23699998853 2456777532210
Q ss_pred CCCchhhHhhHhhcCCCceEEECCCCceEE--EeCCCceecHHHHHHHHHHHHHHHHHHhccCc--cc-cEEEeeCCCCC
Q 002367 99 GKPFKQVKHLIDSLYLPFNVVEDSRGAVSF--KIDENNNFSVEELLAMVLSYAVNLVDTHAKLA--VK-DFVISVPPYFG 173 (930)
Q Consensus 99 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~eel~a~~L~~lk~~a~~~~~~~--~~-~~VItVPa~f~ 173 (930)
++.+.+ .+.+|..... +.+..+++|+... .++.. -. .++||.|+...
T Consensus 75 ------------------------r~~l~l~~Pi~~GvI~dw-d~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~ 126 (498)
T 3qb0_A 75 ------------------------RKDYELKPIIENGLVIDW-DTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNS 126 (498)
T ss_dssp ------------------------CTTEEEEESEETTEESCH-HHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCC
T ss_pred ------------------------cCceEEeccCcCCEEccH-HHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCc
Confidence 000111 1223322222 3445566666532 23322 23 58999999999
Q ss_pred HHHHHHHHHHH-HHcCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEEEeecccccccceeccceE
Q 002367 174 QAERKGLMQAA-ELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQF 252 (930)
Q Consensus 174 ~~qR~al~~Aa-~~AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~ 252 (930)
...|+.+.+.+ +.+|++-+.++.+|.||++++|.. .-||+|+|+|+|+++.|.- |.......
T Consensus 127 ~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~--------tglVVDiG~g~T~vvPI~~--------G~~l~~ai- 189 (498)
T 3qb0_A 127 TENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRP--------NCLVVDIGHDTCSVSPIVD--------GMTLSKST- 189 (498)
T ss_dssp HHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCS--------SEEEEEECSSCEEEEEEET--------TEECGGGC-
T ss_pred HHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCC--------eEEEEEcCCCcEEEEEEeC--------CEEccccc-
Confidence 99999999975 778999999999999999877652 2599999999999999831 11111111
Q ss_pred EEEEecCCCCcchHHHHHHHHHHHHH
Q 002367 253 QVKDVRWDAELGGQNMELRLVEYFAD 278 (930)
Q Consensus 253 ~vl~~~~d~~lGG~~~D~~L~~~l~~ 278 (930)
....+||+++|..|.++|..
T Consensus 190 ------~rl~vgG~~lt~~L~~lL~~ 209 (498)
T 3qb0_A 190 ------RRNFIAGKFINHLIKKALEP 209 (498)
T ss_dssp ------EEESCSHHHHHHHHHHHTTT
T ss_pred ------eeccccHHHHHHHHHHHHHh
Confidence 11379999999999999964
No 32
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.25 E-value=2e-11 Score=112.88 Aligned_cols=83 Identities=19% Similarity=0.347 Sum_probs=77.2
Q ss_pred HHHHHHHHHHhHHhHHHHHHhhccCcccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhccchHHH
Q 002367 668 DRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGDPVFF 747 (930)
Q Consensus 668 ~~~~~~eakN~LEs~iY~~r~~l~~~~~~~~~~~~~er~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~ 747 (930)
.++++.++||.||+|||.+|..|.++. |...+++++++.|...|.++++||+.+ .+++.++|+.++++|+.++.||..
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~-~~~kl~~eek~~i~~~i~e~~~wL~~~-~~a~~e~i~~k~~eL~~~~~~i~~ 80 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEG-LKGKISEADKKKVLDKCQEVISWLDAN-TLAEKDEFEHKRKELEQVCNPIIS 80 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGG-GBTTBCHHHHHHHHHHHHHHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchh-hhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHH
Confidence 578899999999999999999998754 889999999999999999999999986 788999999999999999999999
Q ss_pred hHHhh
Q 002367 748 RFKEL 752 (930)
Q Consensus 748 R~~e~ 752 (930)
|++..
T Consensus 81 k~y~~ 85 (113)
T 3lof_A 81 GLYQG 85 (113)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 99864
No 33
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.09 E-value=4.3e-09 Score=126.11 Aligned_cols=102 Identities=15% Similarity=0.218 Sum_probs=77.7
Q ss_pred HhccCccc-----cEEEeeCCCCCHHHHHHHHHH-HHHcCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCce
Q 002367 155 THAKLAVK-----DFVISVPPYFGQAERKGLMQA-AELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTT 228 (930)
Q Consensus 155 ~~~~~~~~-----~~VItVPa~f~~~qR~al~~A-a~~AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~ 228 (930)
..++.... .+++|.|..|....|+.|.+. .+..|+..+.++.++.+|++++|. .+-+|||+|++.|
T Consensus 187 ~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~--------~tglVVDiG~~~T 258 (593)
T 4fo0_A 187 KYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGL--------SSTCIVDVGDQKT 258 (593)
T ss_dssp HTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTC--------SEEEEEEECSSCE
T ss_pred HhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCC--------CceEEEEeCCCce
Confidence 45665443 399999999999999988877 456699999999999999987764 3579999999999
Q ss_pred EEEEEEEeecccccccceeccceEEEEEecCCCCcchHHHHHHHHHHHHHH
Q 002367 229 YAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADE 279 (930)
Q Consensus 229 dvsvv~~~~~~~~~~g~~~~~~~~~vl~~~~d~~lGG~~~D~~L~~~l~~~ 279 (930)
.|+-|. -|........+ ..+||++++..|.++|..+
T Consensus 259 ~v~PV~--------dG~~l~~~~~r-------l~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 259 SVCCVE--------DGVSHRNTRLC-------LAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp EEEEEE--------SSCBCGGGCEE-------ESCCHHHHHHHHHHHHHHT
T ss_pred eeeeeE--------CCEEehhheEE-------ecccHHHHHHHHHHHHHhc
Confidence 998883 11122222222 2799999999999988754
No 34
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=98.98 E-value=7.9e-09 Score=116.33 Aligned_cols=196 Identities=14% Similarity=0.119 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHc-CC--CeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEEEeecccccccceeccceE
Q 002367 176 ERKGLMQAAELA-GM--NVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQF 252 (930)
Q Consensus 176 qR~al~~Aa~~A-Gl--~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~ 252 (930)
+-+.+.+|.+.+ || .+-. -||.||+++..... ..+..+.++||||||||++++. .+.+
T Consensus 369 ~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeD---E~eLGvaiIDmGGGTTd~sVf~--------------~G~l 429 (610)
T 2d0o_A 369 QMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTP---GTTRPLAILDLGAGSTDASIIN--------------PKGD 429 (610)
T ss_dssp CHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTST---TCCSSEEEEEECSSEEEEEEEC--------------TTCC
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCC---CCcCCeEEEEeCCCcceEEEEc--------------CCcE
Confidence 467788999999 99 6666 89999999876654 4457899999999999999993 2222
Q ss_pred EEEEecCCCCcchHHHHHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhc-CC---------CcccEEE-
Q 002367 253 QVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILS-AN---------TMAPISV- 321 (930)
Q Consensus 253 ~vl~~~~d~~lGG~~~D~~L~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS-~~---------~~~~i~i- 321 (930)
..... ...||++++..|+.-|. -.| +..||++|. .. +. ..-.+.+
T Consensus 430 v~a~~---ip~gG~~VT~DIA~~Lg---------t~d-----------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~ 485 (610)
T 2d0o_A 430 IIATH---LAGAGDMVTMIIARELG---------LED-----------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFF 485 (610)
T ss_dssp EEEEE---EECSHHHHHHHHHHHHT---------CCC-----------HHHHHHHHH-SCEEEECSSSEEEETTSCEEEC
T ss_pred EEEEE---eccchHHHHHHHHHHhC---------CCC-----------HHHHHHhcc-cCceeecccccccCCCCeEEEe
Confidence 22222 36899999999876653 111 357889998 42 11 1223444
Q ss_pred -eecccC---c------ccEEEecHHH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CcCCccEEEEEcCCCCcHH
Q 002367 322 -ESLYVD---I------DFRSSITRQK--FEELCEDLWERSLVP--LREVLNYSGL-----KMDEIYAVELIGGGTRVPK 382 (930)
Q Consensus 322 -e~l~~~---~------d~~~~ItR~e--fe~l~~~~~~~i~~~--i~~~L~~a~~-----~~~~I~~ViLvGG~sriP~ 382 (930)
+.+-.. . +--..| |.. +|+ ++-+-+++.+. +..+|+..+. ...+|..|+|+||++.+|.
T Consensus 486 ~~~lgp~~~~Rv~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~G 563 (610)
T 2d0o_A 486 STPLPPAVFARVCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFE 563 (610)
T ss_dssp SSCCCGGGTTCEEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSS
T ss_pred cCCCCcceeeeeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhccc
Confidence 322111 1 112356 666 777 66555555443 3334554332 3568899999999999999
Q ss_pred HHHHHHHHhCC-C-cc-----CCCCCcchhhhcccHHHHhh
Q 002367 383 LQAKLQEYLGR-T-EL-----DRHLDADEAIVLGASLLAAN 416 (930)
Q Consensus 383 V~~~l~~~fg~-~-~i-----~~~~n~deaVa~GAa~~aa~ 416 (930)
+.++..+.|+. . .+ ...-.|..|+|.|.++|.+.
T Consensus 564 I~ElA~~iL~~y~VRiGrP~~~gv~gP~fAtAvGLlly~~~ 604 (610)
T 2d0o_A 564 VPQLVTDALAHYRLVAGRGNIRGSEGPRNAVATGLILSWHK 604 (610)
T ss_dssp HHHHHHHHTTTSSCEEEECCGGGTSTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcCCeEEecCCccccCCCcHHHHHHHHHHHhh
Confidence 99999999987 2 11 22447899999999987653
No 35
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=98.97 E-value=5.3e-10 Score=104.32 Aligned_cols=82 Identities=20% Similarity=0.408 Sum_probs=73.7
Q ss_pred HHHHHHHHHHhHHhHHHHHHhhccCcccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhccchHHH
Q 002367 668 DRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGDPVFF 747 (930)
Q Consensus 668 ~~~~~~eakN~LEs~iY~~r~~l~~~~~~~~~~~~~er~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~ 747 (930)
.+|++.++||.||+|||++|..|.++. +...+++++|+.|...|.++++||+.+ .++++++|+.++++|+.++.||..
T Consensus 12 ~~re~iEarN~aEsliy~~e~~L~e~~-~~dkl~~eek~~I~~~i~el~~~L~~~-~~ad~e~ik~k~~eL~~~~~~i~~ 89 (120)
T 2p32_A 12 SGLVPRGSHMGLESYAFNLKQTIEDEK-LKDKISPEDKKKIEDKCDEILKWLDSN-QTAEKEEFEHQQKDLEGLANPIIS 89 (120)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHTCTT-TGGGSCHHHHHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchh-hhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHH
Confidence 356788999999999999999997643 778899999999999999999999865 678999999999999999999999
Q ss_pred hHHh
Q 002367 748 RFKE 751 (930)
Q Consensus 748 R~~e 751 (930)
|++.
T Consensus 90 k~y~ 93 (120)
T 2p32_A 90 KLYQ 93 (120)
T ss_dssp HHCC
T ss_pred HHHH
Confidence 8763
No 36
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=98.96 E-value=5.6e-10 Score=126.06 Aligned_cols=194 Identities=15% Similarity=0.080 Sum_probs=130.5
Q ss_pred HHHHHHHHHHc-CC--CeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEEEeecccccccceeccceEE
Q 002367 177 RKGLMQAAELA-GM--NVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQ 253 (930)
Q Consensus 177 R~al~~Aa~~A-Gl--~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~~ 253 (930)
-+.+.+|.+.+ || .+-. -||.||+++..... ..+..+.++||||||||++++. .+.+.
T Consensus 372 m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTed---E~elGvaiIDmGgGTTd~sVf~--------------~g~lv 432 (607)
T 1nbw_A 372 MQVIARELSARLQTEVVVGG--VEANMAIAGALTTP---GCAAPLAILDLGAGSTDAAIVN--------------AEGQI 432 (607)
T ss_dssp SCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTST---TCCSSEEEEEECSSEEEEEEEC--------------SSSCE
T ss_pred HHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCC---CCcCCeEEEEeCCCcceEEEEc--------------CCcEE
Confidence 45678888888 99 6656 89999999876654 4457899999999999999993 22222
Q ss_pred EEEecCCCCcchHHHHHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhc-CC---------CcccEEE--
Q 002367 254 VKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILS-AN---------TMAPISV-- 321 (930)
Q Consensus 254 vl~~~~d~~lGG~~~D~~L~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS-~~---------~~~~i~i-- 321 (930)
.... ...||++++..|+.-|. -.| +..||++|. .. +. ..-.+.+
T Consensus 433 ~a~~---ip~gG~~VT~DIA~~Lg---------~~d-----------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~ 488 (607)
T 1nbw_A 433 TAVH---LAGAGNMVSLLIKTELG---------LED-----------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFR 488 (607)
T ss_dssp EEEE---EECCHHHHHHHHHHHHT---------CSC-----------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECS
T ss_pred EEEE---eccchHHHHHHHHHHhC---------CCC-----------HHHHHHhcc-cCceeecccccccCCCCeEEEec
Confidence 2222 36899999999876653 111 357889998 42 11 1223444
Q ss_pred eecccC---c------ccEEEecHHH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CcCCccEEEEEcCCCCcHHH
Q 002367 322 ESLYVD---I------DFRSSITRQK--FEELCEDLWERSLVP--LREVLNYSGL-----KMDEIYAVELIGGGTRVPKL 383 (930)
Q Consensus 322 e~l~~~---~------d~~~~ItR~e--fe~l~~~~~~~i~~~--i~~~L~~a~~-----~~~~I~~ViLvGG~sriP~V 383 (930)
+.+-.. . +--..| |.. +|+ ++-+-+++.+. +..+|+..+. ...+|..|+|+||++.+|.+
T Consensus 489 ~~lgp~~~~R~~~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI 566 (607)
T 1nbw_A 489 EALSPAVFAKVVYIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEI 566 (607)
T ss_dssp SCCCGGGTTCEEEEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSH
T ss_pred CCCCcceeeeeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccH
Confidence 322111 1 112355 566 777 55555555443 4555777654 24578999999999999999
Q ss_pred HHHHHHHhCC-C-c-----cCCCCCcchhhhcccHHHHh
Q 002367 384 QAKLQEYLGR-T-E-----LDRHLDADEAIVLGASLLAA 415 (930)
Q Consensus 384 ~~~l~~~fg~-~-~-----i~~~~n~deaVa~GAa~~aa 415 (930)
.++..+.|+. . . ....-.|..|+|.|.++|.+
T Consensus 567 ~elA~~iL~~~~VRiGrP~~~g~~gP~fAtAvGLlly~~ 605 (607)
T 1nbw_A 567 PQLITEALSHYGVVAGQGNIRGTEGPRNAVATGLLLAGQ 605 (607)
T ss_dssp HHHHHHHHHTTTCEEEECCGGGTSCSCCHHHHHHHHHHH
T ss_pred HHHHHHHhCcCCeEEecCCccccCCchHHHHHHHHHhhh
Confidence 9999999987 2 1 12244789999999997643
No 37
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=98.82 E-value=1.6e-09 Score=100.05 Aligned_cols=78 Identities=21% Similarity=0.424 Sum_probs=68.8
Q ss_pred HHHHHHhHHhHHHHHHhhccCcccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhccchHHHhHHh
Q 002367 672 TAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGDPVFFRFKE 751 (930)
Q Consensus 672 ~~eakN~LEs~iY~~r~~l~~~~~~~~~~~~~er~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e 751 (930)
+.++||.||+|||.+|..|.+++ +...+++++|+.|...|.++++||.++ .++++++|+.++++|+.++.||..|+++
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e-~~~kl~~~ek~~i~~~i~~l~~~L~~~-~~ad~~~i~~~~~~L~~~~~~i~~~~~~ 79 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEK-LQGKINDEDKQKILDKCNEIISWLDKN-QTAEKEEFEHQQKELEKVCNPIITKLYQ 79 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGG-GTTTSCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHhcchh-hhccCCHHHHHHHHHHHHHHHHHHHcC-CccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999997533 888999999999999999999999754 5578999999999999999999998874
No 38
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.25 E-value=2.1e-05 Score=84.10 Aligned_cols=72 Identities=22% Similarity=0.245 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHHHhhh
Q 002367 341 ELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANL 417 (930)
Q Consensus 341 ~l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~aa~l 417 (930)
+++..+++.+..-+.+.++..++ .+.|+++||.++.|.+++.+.+.++. ++..+.+++.+.|+|||++|+..
T Consensus 186 di~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~lg~-~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 186 DIIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGLGV-EIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHHCS-CEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHHCC-CeEeCCCcchHhHHHHHHHHHHh
Confidence 34444444444444444443321 36799999999999999999999986 66677777778999999998753
No 39
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.81 E-value=5.6e-05 Score=88.18 Aligned_cols=124 Identities=15% Similarity=0.188 Sum_probs=87.6
Q ss_pred ccEEEeeCCCCCHHHHHHHHHHHH-HcCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEEEeeccc
Q 002367 162 KDFVISVPPYFGQAERKGLMQAAE-LAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNA 240 (930)
Q Consensus 162 ~~~VItVPa~f~~~qR~al~~Aa~-~AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~ 240 (930)
..++||.|+.++...|+.+.+.+- ..|++-+.++.++.||++++|. ...-||+|+|+|+|+|+.|.-
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl-------~ttGLVVDiG~g~T~VvPV~e----- 289 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI-------STSTCVVNIGAAETRIACVDE----- 289 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC-------SSCEEEEEECSSCEEEEEEET-----
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC-------CCceEEEcCCCceEEEEEEeC-----
Confidence 369999999999999999999874 6899999999999999988764 246899999999999999831
Q ss_pred ccccceeccceEEEEEecCCCCcchHHHHHHHHHHHHHHHhhhcCC-CCCCCCcHHHHHHHHHHHHHHhhhhcCCC
Q 002367 241 KVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGN-GVDVRKSPKAMAKLKKQVKRTKEILSANT 315 (930)
Q Consensus 241 ~~~g~~~~~~~~~vl~~~~d~~lGG~~~D~~L~~~l~~~f~~~~~~-~~d~~~~~~~~~kL~~~aek~K~~LS~~~ 315 (930)
|........ ...+||++++..|.++|..+-. .+ ..++. ... =+..++.+|+.+.--.
T Consensus 290 ---G~vl~~ai~-------rL~iGG~dLT~yL~kLL~~rgy---py~~~~f~--t~~---e~eiVrdIKEk~CyVs 347 (655)
T 4am6_A 290 ---GTVLEHSAI-------TLDYGGDDITRLFALFLLQSDF---PLQDWKID--SKH---GWLLAERLKKNFTTFQ 347 (655)
T ss_dssp ---TEECGGGCE-------EESCCHHHHHHHHHHHHHHTTC---SCCSCCTT--SHH---HHHHHHHHHHHHCCCC
T ss_pred ---CEEEhhhee-------eecchHHHHHHHHHHHHHHcCC---CccccCCC--Ccc---hHHHHHHHHHheEEEc
Confidence 111111111 1379999999999999876520 00 01111 111 1345677788876553
No 40
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.23 E-value=0.54 Score=50.20 Aligned_cols=49 Identities=24% Similarity=0.253 Sum_probs=36.4
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHHHhh
Q 002367 367 EIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAAN 416 (930)
Q Consensus 367 ~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~aa~ 416 (930)
+...|+|.||.+..+.+.+.|++.+...++.... .+.+.+.||++.+..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 4467899999887788888888877644454444 567899999988754
No 41
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=96.04 E-value=0.032 Score=59.44 Aligned_cols=76 Identities=13% Similarity=-0.029 Sum_probs=54.2
Q ss_pred ecHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcC-CCCcHHHHHHHHHHh--CCCccCCCCCcchhhhcc
Q 002367 334 ITRQKFE-ELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGG-GTRVPKLQAKLQEYL--GRTELDRHLDADEAIVLG 409 (930)
Q Consensus 334 ItR~efe-~l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG-~sriP~V~~~l~~~f--g~~~i~~~~n~deaVa~G 409 (930)
.+++++- .++.-+.+++..+...+.+..+ +..|+++|| .+..|.+++.|.+++ ...++..+.++.-+.|+|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 4566554 3444455555554444444443 446999999 899999999999974 445777888999999999
Q ss_pred cHHHH
Q 002367 410 ASLLA 414 (930)
Q Consensus 410 Aa~~a 414 (930)
||+++
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99864
No 42
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.02 E-value=0.049 Score=59.07 Aligned_cols=76 Identities=13% Similarity=0.170 Sum_probs=46.4
Q ss_pred HHHHHHHH-HcCCCeeEEec-hhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEEEeecccccccceeccceEEEE
Q 002367 178 KGLMQAAE-LAGMNVLSLVN-EHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVK 255 (930)
Q Consensus 178 ~al~~Aa~-~AGl~~l~Li~-EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~~vl 255 (930)
..+.+.++ ..|+++ .+|+ +.+|.....+....+. .....+|+|+|||+|.+++++ .+.+..
T Consensus 100 ~~fl~~v~~~~G~~i-~vIsg~eEA~l~~~gv~~~l~-~~~~~lvvDIGGGStEl~~~~--------------~~~~~~- 162 (315)
T 1t6c_A 100 EEFLERVKREVGLVV-EVITPEQEGRYAYLAVAYSLK-PEGEVCVVDQGGGSTEYVFGK--------------GYKVRE- 162 (315)
T ss_dssp HHHHHHHHHHTCCCE-EECCHHHHHHHHHHHHHHHTC-CCSEEEEEEEETTEEEEEEEE--------------TTEEEE-
T ss_pred HHHHHHHHHHHCCCE-EEcCHHHHHHHHHHHHHhhcc-cCCCEEEEEeCCCcEEEEEEe--------------CCceee-
Confidence 34455444 679997 5665 4445433333333222 235799999999999999983 222211
Q ss_pred EecCCCCcchHHHHHHH
Q 002367 256 DVRWDAELGGQNMELRL 272 (930)
Q Consensus 256 ~~~~d~~lGG~~~D~~L 272 (930)
...-.+|+..+.+.+
T Consensus 163 --~~Sl~~G~v~l~e~~ 177 (315)
T 1t6c_A 163 --VISLPIGIVNLTETF 177 (315)
T ss_dssp --EEEECCCHHHHHHHH
T ss_pred --EEEEeccHHHHHHHh
Confidence 122479988887665
No 43
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=95.84 E-value=0.29 Score=53.10 Aligned_cols=44 Identities=14% Similarity=0.155 Sum_probs=30.2
Q ss_pred cCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEE
Q 002367 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (930)
Q Consensus 187 AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv 233 (930)
.|++ +.+.|+..|||++...... ....+.++++-+|.| +-.+++
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~-~~~~~~~~~l~~GtG-iG~gii 139 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGA-GQGHDDVICITLGTG-LGGGII 139 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHST-TTTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCC-CCCCCCEEEEEeCcc-eEEEEE
Confidence 4887 4799999999997433211 122367888889988 666666
No 44
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=95.73 E-value=1.8 Score=46.93 Aligned_cols=65 Identities=14% Similarity=0.085 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHh---CCCccCCCC---CcchhhhcccHHHHhh
Q 002367 346 LWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYL---GRTELDRHL---DADEAIVLGASLLAAN 416 (930)
Q Consensus 346 ~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~f---g~~~i~~~~---n~deaVa~GAa~~aa~ 416 (930)
+.+.+...+.++.+..+ ++.|+|+||......+++.|.+.+ |- ++..+. -.|.+++.|+|.+...
T Consensus 228 l~~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~-~v~~p~~~~~~D~G~~iG~a~~~~~ 298 (330)
T 2ivn_A 228 AFAALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGI-KFFVPPYDLCRDNGAMIAYTGLRMY 298 (330)
T ss_dssp HHHHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTC-EEECCCHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCC-EEEecCCCCCChhHHHHHHHHHHHH
Confidence 34444555555555433 568999999999999999999877 33 444333 3477889998876543
No 45
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=95.70 E-value=0.2 Score=54.87 Aligned_cols=48 Identities=15% Similarity=-0.116 Sum_probs=39.9
Q ss_pred ccEEEEEcC-CCCcHHHHHHHHHHhC-----CCccCCCCCcchhhhcccHHHHh
Q 002367 368 IYAVELIGG-GTRVPKLQAKLQEYLG-----RTELDRHLDADEAIVLGASLLAA 415 (930)
Q Consensus 368 I~~ViLvGG-~sriP~V~~~l~~~fg-----~~~i~~~~n~deaVa~GAa~~aa 415 (930)
++.|+++|| .++.|.+++.|...++ ..++..+.++.-+-|+|||+.+.
T Consensus 306 i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~~ 359 (360)
T 2i7n_A 306 IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLELF 359 (360)
T ss_dssp CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHHT
T ss_pred CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHhc
Confidence 345999999 8999999999999873 34566677899999999999753
No 46
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=95.06 E-value=0.73 Score=50.03 Aligned_cols=44 Identities=18% Similarity=0.225 Sum_probs=30.0
Q ss_pred cCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEE
Q 002367 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (930)
Q Consensus 187 AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv 233 (930)
.|++ +.+.|+..|||++-..... ....+.++++-+|.| +-.+++
T Consensus 120 ~~~p-V~v~NDa~aaalgE~~~g~-~~~~~~~~~l~~GtG-iG~gii 163 (327)
T 4db3_A 120 IGRS-VKIENDANCFALSEAWDEE-LQDAPSVMGLILGTG-FGGGLI 163 (327)
T ss_dssp HSSC-CEEEEHHHHHHHHHHTSTT-TTTCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecchhHHHHHHHHhCC-CCCCCcEEEEEeCcc-ceEEEE
Confidence 4787 5799999999997433221 123467888888887 555665
No 47
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=95.00 E-value=0.34 Score=51.99 Aligned_cols=45 Identities=18% Similarity=0.154 Sum_probs=29.3
Q ss_pred HcCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEE
Q 002367 186 LAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (930)
Q Consensus 186 ~AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv 233 (930)
..|+++ .+.|+..|||++-..... ....++++++-+|.| +-.+++
T Consensus 97 ~~~~pv-~v~NDa~aaal~E~~~g~-~~~~~~~~~l~~GtG-iG~gii 141 (302)
T 3vov_A 97 ATGRPV-FLENDANAAALAEHHLGA-AQGEESSLYLTVSTG-IGGGVV 141 (302)
T ss_dssp HHSSCE-EEEEHHHHHHHHHHHHST-TTTCSCEEEEEESSS-EEEEEE
T ss_pred hhCCCE-EEEechHHHHHHHHHhCC-CCCCCCEEEEEECCc-eeEEEE
Confidence 347765 799999999987433221 122357888888877 455555
No 48
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=94.97 E-value=0.033 Score=65.53 Aligned_cols=84 Identities=19% Similarity=0.249 Sum_probs=59.5
Q ss_pred EecHHHHHHHHHHHHHHHHHHHHH---HHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcc
Q 002367 333 SITRQKFEELCEDLWERSLVPLRE---VLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLG 409 (930)
Q Consensus 333 ~ItR~efe~l~~~~~~~i~~~i~~---~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~G 409 (930)
.-+|.+|-.++.-+++.+.--+.. +|+..+. .++.|.++||+++.|.+.+++.+.||. +|... ...|+.|+|
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~---~~~~i~~~GG~aks~~~~Qi~ADv~g~-pV~~~-~~~e~~alG 482 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGY---NIDTMMASGGGTKNPIFVQEHANATGC-AMLLP-EESEAMLLG 482 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC---CCCEEEEESGGGGCHHHHHHHHHHHCC-EEEEE-SCSCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEeCccccCHHHHHHHHHhhCC-eEEec-CCCcchHHH
Confidence 347888754444444444333333 3344444 578899999999999999999999996 55443 456899999
Q ss_pred cHHHHhhhcCCc
Q 002367 410 ASLLAANLSDGI 421 (930)
Q Consensus 410 Aa~~aa~ls~~~ 421 (930)
||+.|+.-.+.+
T Consensus 483 AA~lA~~a~G~~ 494 (554)
T 3l0q_A 483 SAMMGTVAAGVF 494 (554)
T ss_dssp HHHHHHHHTTSS
T ss_pred HHHHHHHHcCCc
Confidence 999998765544
No 49
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=94.81 E-value=0.087 Score=47.83 Aligned_cols=79 Identities=22% Similarity=0.247 Sum_probs=62.8
Q ss_pred hhcchHHHHHHHHHHHHHHHHHhccccCCCCCChhhhHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHH
Q 002367 752 LTARPASVEHAQKYLGQLQQIVNDWETNKPWLPKDRTDEVLKDSETFKSWLDEKENDQKKTSGFSKPAFTSEEVYEKILK 831 (930)
Q Consensus 752 ~~~rp~ai~~l~~~l~~~~~~~~~~~~~~~~it~~e~~~l~~~~~~~~~Wl~~~~~~Q~~~~~~~dP~~~~~di~~k~~~ 831 (930)
...|-++...|..++..+++.+.. ..-...|+++++..|...|+++..||+.. + .....+|+.|++.
T Consensus 4 ~re~ieakN~lEs~iy~~e~~l~e-~~~~~kl~~eek~~i~~~i~e~~~wL~~~---~---------~a~~e~i~~k~~e 70 (113)
T 3lof_A 4 AAERVSAKNALESYAFNMKSAVED-EGLKGKISEADKKKVLDKCQEVISWLDAN---T---------LAEKDEFEHKRKE 70 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC-GGGBTTBCHHHHHHHHHHHHHHHHHHHHC---T---------TCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc-hhhhccCCHHHHHHHHHHHHHHHHHHHcC---C---------cCCHHHHHHHHHH
Confidence 345567778899999999998875 12345789999999999999999999861 1 1246899999999
Q ss_pred HHHHHHhhhcCC
Q 002367 832 LQDKINSINRIP 843 (930)
Q Consensus 832 l~~~~~~l~~kp 843 (930)
|+..+.+|+.+.
T Consensus 71 L~~~~~~i~~k~ 82 (113)
T 3lof_A 71 LEQVCNPIISGL 82 (113)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998643
No 50
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=94.80 E-value=0.3 Score=52.82 Aligned_cols=44 Identities=23% Similarity=0.330 Sum_probs=29.6
Q ss_pred cCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEE
Q 002367 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (930)
Q Consensus 187 AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv 233 (930)
.|++ +.+.|+..|||++...... ......++++-+|.| +-.+++
T Consensus 108 ~~~p-v~v~ND~~aaa~~e~~~g~-~~~~~~~~~l~~GtG-iG~giv 151 (326)
T 2qm1_A 108 LGIP-FALDNDANVAALGERWKGA-GENNPDVIFITLGTG-VGGGIV 151 (326)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHST-TTTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEecHHHHHHHHHHHhCC-CCCCCcEEEEEECCc-eEEEEE
Confidence 4776 4799999999987432211 112357888889988 556665
No 51
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=94.74 E-value=0.28 Score=53.13 Aligned_cols=45 Identities=11% Similarity=0.123 Sum_probs=30.2
Q ss_pred Hc-CCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEE
Q 002367 186 LA-GMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (930)
Q Consensus 186 ~A-Gl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv 233 (930)
.. |+++ .+.|+..|||++-..... ....+.++++-+|.| +-.+++
T Consensus 116 ~~~~~pV-~v~NDa~aaalaE~~~g~-~~~~~~~v~l~~GtG-iG~gii 161 (321)
T 3r8e_A 116 EFPHIHF-KIENDAKCAALGEYYFGE-NKRMQTFILLALGTG-VGSGVM 161 (321)
T ss_dssp HCTTSEE-EEEEHHHHHHHHHHHHST-TTTCSSEEEEEESSS-EEEEEE
T ss_pred HcCCCCE-EEEchHHHHHHHHHHhCC-CCCCCcEEEEEECCc-eEEEEE
Confidence 45 7764 799999999997433211 122367888889988 666665
No 52
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=94.61 E-value=0.65 Score=49.65 Aligned_cols=50 Identities=20% Similarity=0.202 Sum_probs=35.4
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHhCCC-----ccCCCCCcchhhhcccHHHHhh
Q 002367 367 EIYAVELIGGGTRVPKLQAKLQEYLGRT-----ELDRHLDADEAIVLGASLLAAN 416 (930)
Q Consensus 367 ~I~~ViLvGG~sriP~V~~~l~~~fg~~-----~i~~~~n~deaVa~GAa~~aa~ 416 (930)
+.+.|+|-||.++.|.+.+.|++.+... .+....-.+.+.++||++.+..
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 4567999999888877777777776532 2333334567999999988764
No 53
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=94.54 E-value=6.4 Score=42.60 Aligned_cols=59 Identities=8% Similarity=0.027 Sum_probs=40.3
Q ss_pred ccccEEEeeCCCCCHHHHHHHHHHHHH-cC---CCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCc
Q 002367 160 AVKDFVISVPPYFGQAERKGLMQAAEL-AG---MNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATT 227 (930)
Q Consensus 160 ~~~~~VItVPa~f~~~qR~al~~Aa~~-AG---l~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT 227 (930)
.+..+.|++|...+......+.+..+. .| ++ +.+.|+..|||+++ .. ...+++=+|.|.
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~p-v~v~NDa~aaa~a~-~~-------~~~v~v~~GTGi 132 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSES-YLITTDAAGSIATA-TP-------DGGVVLISGTGS 132 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSC-EEEEEHHHHHHHHH-CS-------SCEEEEEESSSE
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCce-EEEECcHHHHHHhh-CC-------CCcEEEEEcCCc
Confidence 577899999999987655566665544 34 44 57999999999984 21 234555556654
No 54
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=94.38 E-value=0.059 Score=62.67 Aligned_cols=53 Identities=23% Similarity=0.205 Sum_probs=44.5
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHHHhhhcCCc
Q 002367 368 IYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSDGI 421 (930)
Q Consensus 368 I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~aa~ls~~~ 421 (930)
++.|.++||+++.+.+.+++.+.||. +|.....+.|+.|+|||+.|+.-.+.+
T Consensus 403 ~~~i~~~GGga~s~~~~Qi~ADv~g~-pV~~~~~~~e~~alGaA~lA~~a~G~~ 455 (511)
T 3hz6_A 403 VGLLKVVGGGARSEAWLRMIADNLNV-SLLVKPDAHLHPLRGLAALAAVELEWS 455 (511)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHHTC-EEEECCCGGGHHHHHHHHHHHHHTTSC
T ss_pred CCEEEEeCchhcCHHHHHHHHHHHCC-eeEEecCCCCchHHHHHHHHHHHhCCc
Confidence 78999999999999999999999996 551234688999999999998765544
No 55
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=94.38 E-value=0.054 Score=63.41 Aligned_cols=78 Identities=13% Similarity=0.127 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHHHhhhcC
Q 002367 340 EELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSD 419 (930)
Q Consensus 340 e~l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~aa~ls~ 419 (930)
..+++-+++.+.--+..+++..+.....++.|.++||+++.+.+.+++.+.||. +|.. ....|+.|+|||+.|+.-.+
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~-pV~~-~~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDA-PVYV-IDTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTS-CEEE-CCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCC-ceEe-cCCCCchHHHHHHHHHHHhC
Confidence 344445555554444555555444444678899999999999999999999996 5543 35678999999999886443
No 56
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=94.35 E-value=1.6 Score=48.41 Aligned_cols=42 Identities=12% Similarity=0.122 Sum_probs=28.4
Q ss_pred cCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEE
Q 002367 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (930)
Q Consensus 187 AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv 233 (930)
.|++ +.+.|+..|||++...... .. ..++++-+|.| +-.+++
T Consensus 188 ~~~p-V~v~NDanaaalaE~~~g~--~~-~~~v~l~~GtG-iG~giv 229 (380)
T 2hoe_A 188 YGIE-VWVENDADMGAVGEKWYTK--RD-DSFAWILTGKG-IGAGII 229 (380)
T ss_dssp HCSE-EEEEEHHHHHHHHHHHHTT--CC-SCEEEEEESSS-CEEEEE
T ss_pred hCCC-EEEechHHHHHHHHHHhCC--CC-CcEEEEEeCCc-eEEEEE
Confidence 4776 5799999999997533221 11 57888888887 445655
No 57
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=94.15 E-value=0.053 Score=62.63 Aligned_cols=81 Identities=25% Similarity=0.315 Sum_probs=53.2
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHH
Q 002367 335 TRQKFEE-LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (930)
Q Consensus 335 tR~efe~-l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~ 413 (930)
+|.+|-. +++-+.-.+...++ .|+..+. .++.|.++||+++.+.+.+++.+.+|. ++......+.+.|+|||+.
T Consensus 357 ~~~~~~rAvlEgia~~~~~~~~-~l~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~-pV~~~~~~e~~~alGAA~l 431 (484)
T 2itm_A 357 GPNELARAVLEGVGYALADGMD-VVHACGI---KPQSVTLIGGGARSEYWRQMLADISGQ-QLDYRTGGDVGPALGAARL 431 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHTTTC---CCSCEEEESGGGCCHHHHHHHHHHHCC-CEEEESCTTSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CcceEEEEeccccCHHHHHHHHHHhCC-eEEeCCCCCcccHHHHHHH
Confidence 4555533 22333333333333 3333343 467899999999999999999999996 5655544443589999999
Q ss_pred HhhhcCC
Q 002367 414 AANLSDG 420 (930)
Q Consensus 414 aa~ls~~ 420 (930)
|+.-.+.
T Consensus 432 A~~~~g~ 438 (484)
T 2itm_A 432 AQIAANP 438 (484)
T ss_dssp HHHHHCT
T ss_pred HHHHcCC
Confidence 9865543
No 58
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=94.09 E-value=0.068 Score=61.91 Aligned_cols=80 Identities=24% Similarity=0.218 Sum_probs=54.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHHH
Q 002367 335 TRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLA 414 (930)
Q Consensus 335 tR~efe~l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~a 414 (930)
+|.+| ++-+++.+.-.+..+++...-.. .++.|.++||+++.+.+.+++.+.||. ++... ...|+.|+|||+.|
T Consensus 365 ~~~~l---~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~g~-pV~~~-~~~e~~alGaA~lA 438 (497)
T 2zf5_O 365 GREHL---ARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADILNR-KVIRP-VVKETTALGAAYLA 438 (497)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHHTS-CEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhcCC-eEEEc-CCCcchHHHHHHHH
Confidence 45544 33444444444444444332222 578899999999999999999999996 55433 44569999999999
Q ss_pred hhhcCC
Q 002367 415 ANLSDG 420 (930)
Q Consensus 415 a~ls~~ 420 (930)
+.-.+.
T Consensus 439 ~~~~g~ 444 (497)
T 2zf5_O 439 GLAVDY 444 (497)
T ss_dssp HHHTTS
T ss_pred HHHhCc
Confidence 875543
No 59
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=94.05 E-value=0.08 Score=61.78 Aligned_cols=83 Identities=20% Similarity=0.218 Sum_probs=57.7
Q ss_pred ecHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHH
Q 002367 334 ITRQKFEEL-CEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASL 412 (930)
Q Consensus 334 ItR~efe~l-~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~ 412 (930)
-+|.+|-.. ++-+.-.+...++..-+..|. .++.|.++||+++.+.+.+++.+.||. +|..+ ...|+.|+|||+
T Consensus 371 ~~~~~i~RAvlEgia~~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvlg~-pV~~~-~~~E~~alGAA~ 445 (526)
T 3ezw_A 371 VNANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGT-RVERP-EVREVTALGAAY 445 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTS-EEEEE-SCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHHCC-EEEeC-CCCchHHHHHHH
Confidence 355555432 233333444444444344665 467899999999999999999999996 55443 456899999999
Q ss_pred HHhhhcCCc
Q 002367 413 LAANLSDGI 421 (930)
Q Consensus 413 ~aa~ls~~~ 421 (930)
.|+.-.+.|
T Consensus 446 lA~~a~G~~ 454 (526)
T 3ezw_A 446 LAGLAVGFW 454 (526)
T ss_dssp HHHHHTTSS
T ss_pred HHHHHhCCC
Confidence 999766654
No 60
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=93.83 E-value=0.075 Score=61.69 Aligned_cols=81 Identities=11% Similarity=0.028 Sum_probs=55.1
Q ss_pred cHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHH
Q 002367 335 TRQKFEELC-EDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (930)
Q Consensus 335 tR~efe~l~-~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~ 413 (930)
+|.+|-..+ +-+.-.+...+ +.|+..+. .++.|.++||+++.+.+.+++.+.||. +|.. ....|+.|+|||+.
T Consensus 364 ~~~~l~RAvlEgia~~~r~~~-~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~-pV~~-~~~~e~~alGaA~l 437 (504)
T 3ll3_A 364 QKPEMARAVIEGIIFNLYDAA-SNLIKNTK---KPVAINATGGFLKSDFVRQLCANIFNV-PIVT-MKEQQSGTLAAMFL 437 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-HHHHTTSC---CCSEEEEESGGGCSHHHHHHHHHHHTS-CEEE-ESCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CCCEEEEeCchhcCHHHHHHHHHhhCC-eEEe-cCCCCchhHHHHHH
Confidence 565553322 22333333333 33444443 578999999999999999999999996 5544 34567999999999
Q ss_pred HhhhcCCc
Q 002367 414 AANLSDGI 421 (930)
Q Consensus 414 aa~ls~~~ 421 (930)
|+.-.+.+
T Consensus 438 A~~a~G~~ 445 (504)
T 3ll3_A 438 ARQALGLN 445 (504)
T ss_dssp HHHHTTSC
T ss_pred HHHHcCcc
Confidence 98755544
No 61
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=93.61 E-value=1.6 Score=46.23 Aligned_cols=43 Identities=14% Similarity=0.120 Sum_probs=29.3
Q ss_pred HcCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEE
Q 002367 186 LAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (930)
Q Consensus 186 ~AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv 233 (930)
..|++ +.+.|+..|||++... . ....+.++++-+|.| +-.+++
T Consensus 93 ~~~~p-v~v~NDa~aaa~~e~~-~--~~~~~~~v~l~~GtG-iG~giv 135 (292)
T 2gup_A 93 SYQLP-VHLENDANCVGLSELL-A--HPELENAACVVIGTG-IGGAMI 135 (292)
T ss_dssp GGCCC-EEEEEHHHHHHHHHHH-H--CTTCSSEEEEEESSS-EEEEEE
T ss_pred HcCCC-EEEechHHHHHHHHHH-h--cCCCCeEEEEEECCc-eEEEEE
Confidence 35776 4799999999987543 1 122357888888887 455555
No 62
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=93.48 E-value=0.062 Score=62.53 Aligned_cols=79 Identities=27% Similarity=0.362 Sum_probs=54.8
Q ss_pred cHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHH
Q 002367 335 TRQKFEEL-CEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (930)
Q Consensus 335 tR~efe~l-~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~ 413 (930)
+|.+|-.. ++-+.-.+...++ .|++.+. .++.|.++||+++.|.+.+++.+.||. +|.. ....|+.|+|||+.
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l~-~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~-pV~~-~~~~e~~alGAA~l 468 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCLE-LIRSLGA---SITRILLIGGGAKSEAIRTLAPSILGM-DVTR-PATDEYVAIGAARQ 468 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-HHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHHTS-CEEE-ECCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CCCEEEEECchhcCHHHHHHHHHHhCC-ceEe-cCCcccHHHHHHHH
Confidence 56655432 2333334444333 3445554 467899999999999999999999996 5543 34567999999999
Q ss_pred HhhhcC
Q 002367 414 AANLSD 419 (930)
Q Consensus 414 aa~ls~ 419 (930)
|+.-.+
T Consensus 469 A~~a~G 474 (515)
T 3i8b_A 469 AAWVLS 474 (515)
T ss_dssp HHHHHH
T ss_pred HHHHcC
Confidence 986444
No 63
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=93.32 E-value=0.12 Score=59.89 Aligned_cols=81 Identities=20% Similarity=0.073 Sum_probs=55.1
Q ss_pred cHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHH
Q 002367 335 TRQKFEELC-EDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (930)
Q Consensus 335 tR~efe~l~-~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~ 413 (930)
+|.+|-..+ +-+.-.+...++ .|+..+. .++.|.++||+++.+.+.+++.+.||. +|... ...|+.|+|||+.
T Consensus 371 ~~~~l~rAvlEgia~~~~~~~~-~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~-pV~~~-~~~e~~alGaA~l 444 (508)
T 3ifr_A 371 TRGHLWRALLEAVALAFRHHVA-VLDDIGH---APQRFFASDGGTRSRVWMGIMADVLQR-PVQLL-ANPLGSAVGAAWV 444 (508)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHHTS-CEEEE-ECCSTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHhCC-eEEec-CCCCchHHHHHHH
Confidence 566554322 333333333333 3444454 467899999999999999999999996 55444 3357899999999
Q ss_pred HhhhcCCc
Q 002367 414 AANLSDGI 421 (930)
Q Consensus 414 aa~ls~~~ 421 (930)
|+.-.+.+
T Consensus 445 A~~a~G~~ 452 (508)
T 3ifr_A 445 AAIGGGDD 452 (508)
T ss_dssp HHHHTCSS
T ss_pred HHHHhCCC
Confidence 98755543
No 64
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=92.98 E-value=0.088 Score=61.04 Aligned_cols=82 Identities=17% Similarity=0.246 Sum_probs=56.6
Q ss_pred cHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHH
Q 002367 335 TRQKFEEL-CEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (930)
Q Consensus 335 tR~efe~l-~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~ 413 (930)
+|.+|-.. ++-+.-.+...++..-+..|. .++.|.++||+++.+.+.+++.+.||. +|.. ....|+.|+|||+.
T Consensus 374 ~~~~l~RAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~g~-pV~~-~~~~e~~alGaA~l 448 (501)
T 3g25_A 374 EKEHFIRATLESLCYQTRDVMEAMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIVNT-SVER-PEIQETTALGAAFL 448 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHHTS-EEEE-ESCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHhCC-ceEe-cCCCcchHHHHHHH
Confidence 46555432 233434444444433333554 467899999999999999999999996 5533 34678999999999
Q ss_pred HhhhcCCc
Q 002367 414 AANLSDGI 421 (930)
Q Consensus 414 aa~ls~~~ 421 (930)
|+.-.+.+
T Consensus 449 a~~a~G~~ 456 (501)
T 3g25_A 449 AGLAVGFW 456 (501)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCcc
Confidence 98766554
No 65
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=92.77 E-value=0.07 Score=62.15 Aligned_cols=53 Identities=21% Similarity=0.173 Sum_probs=43.0
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHHHhhhcCCc
Q 002367 367 EIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSDGI 421 (930)
Q Consensus 367 ~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~aa~ls~~~ 421 (930)
.++.|.++||+++.|.+.+++.+.||. +|.. ....|+.|+|||+.|+.-.+.+
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvlg~-pV~~-~~~~e~~alGAA~lA~~a~G~~ 477 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLLDA-PVDR-PVILETTALGVAWLAGSRAGVW 477 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHHTS-CEEE-ESCCCHHHHHHHHHHHHHHTSS
T ss_pred CcceEEEeCccccCHHHHHHHHHHhCC-eEEe-cCCCccHHHHHHHHHHHHcCCc
Confidence 467899999999999999999999996 5543 3457899999999998766544
No 66
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=92.62 E-value=0.091 Score=61.06 Aligned_cols=82 Identities=21% Similarity=0.203 Sum_probs=55.6
Q ss_pred cHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHH
Q 002367 335 TRQKFEEL-CEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (930)
Q Consensus 335 tR~efe~l-~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~ 413 (930)
+|.+|-.. ++-+.-.+...++..-+..|. .++.|.++||+++.+.+.+++.+.||. +|.. ..+.|+.|+|||+.
T Consensus 371 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~-pV~~-~~~~e~~alGaA~l 445 (510)
T 2p3r_A 371 NANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGT-RVER-PEVREVTALGAAYL 445 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTS-EEEE-ESCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccEEEEeCchhcCHHHHHHHHHHhCC-ceEe-cCCCCcHHHHHHHH
Confidence 46555432 233333444444333223354 467899999999999999999999996 5543 34668999999999
Q ss_pred HhhhcCCc
Q 002367 414 AANLSDGI 421 (930)
Q Consensus 414 aa~ls~~~ 421 (930)
|+.-.+.+
T Consensus 446 A~~a~G~~ 453 (510)
T 2p3r_A 446 AGLAVGFW 453 (510)
T ss_dssp HHHHHTSS
T ss_pred HHHHhCcc
Confidence 98755544
No 67
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=92.56 E-value=0.1 Score=61.48 Aligned_cols=79 Identities=15% Similarity=0.174 Sum_probs=54.3
Q ss_pred cHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCC-CcHHHHHHHHHHhCCCccCCCCCcchhhhcccHH
Q 002367 335 TRQKFEELC-EDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGT-RVPKLQAKLQEYLGRTELDRHLDADEAIVLGASL 412 (930)
Q Consensus 335 tR~efe~l~-~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~s-riP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~ 412 (930)
+|.+|-..+ +-+.-.+...+ +.|+..|. .++.|.++||++ +.+.+.+++.+.||. +|.. ....|+.|+|||+
T Consensus 410 t~~~l~RAvlEgia~~~r~~~-~~l~~~g~---~~~~i~~~GGga~ks~~~~Qi~ADv~g~-pV~~-~~~~e~~alGaA~ 483 (572)
T 3jvp_A 410 KPEEIYRALLEATAFGTRAIV-DAFHGRGV---EVHELYACGGLPQKNHLLMQIFADVTNR-EIKV-AASKQTPALGAAM 483 (572)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-HHHHTTTC---CEEEEEEESSHHHHCHHHHHHHHHHHTS-CEEE-BCCSSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CcCEEEEEcCchhhCHHHHHHHHHHHCC-eeEe-cCCCccHHHHHHH
Confidence 566553322 22333333333 23444444 578899999999 999999999999996 5533 3467899999999
Q ss_pred HHhhhcC
Q 002367 413 LAANLSD 419 (930)
Q Consensus 413 ~aa~ls~ 419 (930)
.|+.-.+
T Consensus 484 lA~~a~G 490 (572)
T 3jvp_A 484 FASVAAG 490 (572)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9987554
No 68
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=92.45 E-value=0.16 Score=58.77 Aligned_cols=80 Identities=16% Similarity=0.169 Sum_probs=54.3
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHH
Q 002367 335 TRQKFEE-LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (930)
Q Consensus 335 tR~efe~-l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~ 413 (930)
+|.+|-. +++-+.-.+...++..-+..+. .++.|.++||+++.+.+.+++.+.+|. +|... ...|+.|+|||+.
T Consensus 368 ~~~~~~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~n~~~~q~~Adv~g~-pV~~~-~~~e~~alGaA~l 442 (495)
T 2dpn_A 368 SRAHLARAALEGVAFQVRDVVLAMEEEAGV---RLKVLKADGGMAQNRLFLKIQADLLGV-PVAVP-EVTETTALGAALM 442 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTSC---CCCCEEEESGGGGCHHHHHHHHHHHTS-CEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecccccCHHHHHHHHHHhCC-eeEec-CCcccHHHHHHHH
Confidence 5555432 3344444444444433222343 456799999999999999999999986 55433 4567999999999
Q ss_pred HhhhcC
Q 002367 414 AANLSD 419 (930)
Q Consensus 414 aa~ls~ 419 (930)
|+.-.+
T Consensus 443 a~~a~G 448 (495)
T 2dpn_A 443 AGVGAG 448 (495)
T ss_dssp HHHHHT
T ss_pred HHhhcC
Confidence 886444
No 69
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=92.44 E-value=0.11 Score=60.28 Aligned_cols=82 Identities=21% Similarity=0.202 Sum_probs=56.4
Q ss_pred cHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHH
Q 002367 335 TRQKFEEL-CEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (930)
Q Consensus 335 tR~efe~l-~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~ 413 (930)
+|.+|-.. ++-+.-.+...++..-+..|. .++.|.++||+++.+.+.+++.+.||. +|.. ..+.|+.|+|||+.
T Consensus 373 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~-pV~~-~~~~e~~alGaA~l 447 (506)
T 3h3n_X 373 TKEDFVRATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADILDI-DVQR-AANLETTALGAAYL 447 (506)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHHTS-EEEE-CSSSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHhCC-eEEe-cCCCcchhHHHHHH
Confidence 56655432 233333444444433222454 467899999999999999999999996 5543 35678999999999
Q ss_pred HhhhcCCc
Q 002367 414 AANLSDGI 421 (930)
Q Consensus 414 aa~ls~~~ 421 (930)
|+.-.+.+
T Consensus 448 A~~a~G~~ 455 (506)
T 3h3n_X 448 AGLAVGFW 455 (506)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCcc
Confidence 98765544
No 70
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=92.04 E-value=0.21 Score=57.88 Aligned_cols=82 Identities=20% Similarity=0.139 Sum_probs=56.5
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHHH
Q 002367 335 TRQKFEE-LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (930)
Q Consensus 335 tR~efe~-l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~ 413 (930)
+|.+|-. +++-+.-.+...++..-+..+. .++.|.++||+++.+.+.+++.+.||. +|... ...|+.|+|||+.
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~-pV~~~-~~~e~~alGaA~l 447 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQLGV-DVVRP-KVAETTALGAAYA 447 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHHTS-CEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHhCC-eEEeC-CCCcchHHHHHHH
Confidence 5665543 3344444444444443333454 367899999999999999999999986 55433 4567999999999
Q ss_pred HhhhcCCc
Q 002367 414 AANLSDGI 421 (930)
Q Consensus 414 aa~ls~~~ 421 (930)
|+.-.+.+
T Consensus 448 A~~~~G~~ 455 (504)
T 2d4w_A 448 AGIAVGFW 455 (504)
T ss_dssp HHHHHTSS
T ss_pred HHhhcCcc
Confidence 98755533
No 71
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=91.94 E-value=6.1 Score=46.34 Aligned_cols=57 Identities=18% Similarity=0.244 Sum_probs=44.1
Q ss_pred EEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHH
Q 002367 331 RSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQ 388 (930)
Q Consensus 331 ~~~ItR~efe~l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~ 388 (930)
.+.||..+++++..- -.-|..-++-.|+.+|++.++|+.|+|.||++.-=-+.+++.
T Consensus 499 ~i~itq~DIr~~qlA-KaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~ 555 (631)
T 3zyy_X 499 DIVITEADIQNLIRA-KAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAIT 555 (631)
T ss_dssp CEEEEHHHHHHHHHH-HHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHH
T ss_pred cEEEeHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhh
Confidence 478999999986432 233455667778899999999999999999988766666654
No 72
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=91.91 E-value=1.5 Score=49.78 Aligned_cols=63 Identities=19% Similarity=0.194 Sum_probs=43.9
Q ss_pred eeCCCCCHHHHHHHHHHHHHcCCCe--eEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEE
Q 002367 167 SVPPYFGQAERKGLMQAAELAGMNV--LSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVY 234 (930)
Q Consensus 167 tVPa~f~~~qR~al~~Aa~~AGl~~--l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~ 234 (930)
.+|.+-+..-++.|.+|...-|+++ ..|+|+.+|++++-+... +..++.+=+|-|+=-.-+..
T Consensus 165 ~~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~-----~~~~iglIlGTG~na~yve~ 229 (451)
T 1bdg_A 165 SADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED-----PKCAVGLIVGTGTNVAYIED 229 (451)
T ss_dssp CCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC-----TTEEEEEEESSSEEEEEEEE
T ss_pred CCCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC-----CCcEEEEEEeCCcceEEEEc
Confidence 3444445566888888887778863 599999999998765542 35777777888855444443
No 73
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=91.00 E-value=1.5 Score=50.72 Aligned_cols=75 Identities=11% Similarity=0.179 Sum_probs=45.7
Q ss_pred HHHHHH-HHcCCCeeEEechhhHHHHHh-ccccCCCCCCcEEEEEEcCCCceEEEEEEEeecccccccceeccceEEEEE
Q 002367 179 GLMQAA-ELAGMNVLSLVNEHSGAALQY-GIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKD 256 (930)
Q Consensus 179 al~~Aa-~~AGl~~l~Li~EptAAAl~y-~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~g~~~~~~~~~vl~ 256 (930)
.+.+.+ +..|+++ .+|+...=|.+.| |....+... ...+|+|+|||+|.+++++ ++.+..
T Consensus 100 ~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~-~~~lviDIGGGStEl~~~~--------------~~~~~~-- 161 (513)
T 1u6z_A 100 DFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQPEK-GRKLVIDIGGGSTELVIGE--------------NFEPIL-- 161 (513)
T ss_dssp HHHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHHSCCC-SCEEEEEECSSCEEEEEEE--------------TTEEEE--
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhccCC-CCEEEEEECCCcEEEEEEe--------------CCeeeE--
Confidence 344444 4569987 6888666665555 332222222 2699999999999999983 222211
Q ss_pred ecCCCCcchHHHHHHH
Q 002367 257 VRWDAELGGQNMELRL 272 (930)
Q Consensus 257 ~~~d~~lGG~~~D~~L 272 (930)
...-.+|.-.+.+.+
T Consensus 162 -~~Sl~lG~vrlte~f 176 (513)
T 1u6z_A 162 -VESRRMGCVSFAQLY 176 (513)
T ss_dssp -EEEESCCHHHHHHHH
T ss_pred -EEEEeccHHHHHHHH
Confidence 112378888876655
No 74
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=90.95 E-value=1.1 Score=48.48 Aligned_cols=44 Identities=20% Similarity=0.145 Sum_probs=29.3
Q ss_pred cCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEE
Q 002367 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (930)
Q Consensus 187 AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv 233 (930)
.|++ +.+.|+..|||++...... ......++++-+|.| +-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~-~~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDE-FTQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTT-GGGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCc-CCCCCcEEEEEECCc-EEEEEE
Confidence 4776 5799999999987432211 112467888888888 556655
No 75
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=90.91 E-value=0.32 Score=56.28 Aligned_cols=81 Identities=17% Similarity=0.143 Sum_probs=55.0
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCc-cEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccHH
Q 002367 335 TRQKFEE-LCEDLWERSLVPLREVLNYSGLKMDEI-YAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASL 412 (930)
Q Consensus 335 tR~efe~-l~~~~~~~i~~~i~~~L~~a~~~~~~I-~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~ 412 (930)
+|.++-. +++-+.-.+...++..-+..+. .+ +.|.++||+++.+.+.+++.+.+|. +|.. ....|+.|+|||+
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~g~-pV~~-~~~~e~~alGaA~ 450 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDIINT-KIEV-SKYKEVTSLGAAV 450 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHHTS-CEEE-ESCSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHHCC-eEEe-cCCCcchHHHHHH
Confidence 4555543 3344444444444433233454 35 6799999999999999999999986 5543 3456799999999
Q ss_pred HHhhhcCC
Q 002367 413 LAANLSDG 420 (930)
Q Consensus 413 ~aa~ls~~ 420 (930)
.|+.-.+.
T Consensus 451 la~~~~G~ 458 (503)
T 2w40_A 451 LAGLEVKI 458 (503)
T ss_dssp HHHHHTTC
T ss_pred HHHHHhCc
Confidence 99875543
No 76
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=90.89 E-value=7.8 Score=41.38 Aligned_cols=49 Identities=33% Similarity=0.283 Sum_probs=32.8
Q ss_pred CccEEEEEcCCCCc-----HHHHHHHHHHhCC------CccCCCCCcchhhhcccHHHHh
Q 002367 367 EIYAVELIGGGTRV-----PKLQAKLQEYLGR------TELDRHLDADEAIVLGASLLAA 415 (930)
Q Consensus 367 ~I~~ViLvGG~sri-----P~V~~~l~~~fg~------~~i~~~~n~deaVa~GAa~~aa 415 (930)
+.+.|+|-||.++. +.+++.|++++.. .++....-.+.+.++|||..+.
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 45678888888765 4677777776531 1222333456799999998775
No 77
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=90.78 E-value=1.9 Score=48.19 Aligned_cols=44 Identities=16% Similarity=0.178 Sum_probs=29.2
Q ss_pred cCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEE
Q 002367 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (930)
Q Consensus 187 AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv 233 (930)
.|+++ .+.|+..|||++...... ......++++-+|.| +-.+++
T Consensus 186 ~~~pv-~v~NDa~aaalaE~~~g~-~~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVPV-YIQHDISAWTMAEALFGA-SRGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSCE-EEEEHHHHHHHHHHHHST-TTTCSSEEEEEESSS-EEEEEE
T ss_pred HCCCE-EEechhHHHHHHHHHhcC-CCCCCcEEEEEECCc-EEEEEE
Confidence 47774 799999999987432211 112356888888887 556665
No 78
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=90.72 E-value=0.2 Score=57.80 Aligned_cols=78 Identities=17% Similarity=0.167 Sum_probs=51.4
Q ss_pred EecHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccCCCCCcchhhhcccH
Q 002367 333 SITRQKFEE-LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGAS 411 (930)
Q Consensus 333 ~ItR~efe~-l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa 411 (930)
.-+|.+|-. +++-+.-.+...++..-+..|. .++.|.++||+++.+.+.+++.+.||. +|... . .|+.++|||
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~-pV~~~-~-~e~~alGaa 434 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVLHELAQLRGE---DFSQLHIVGGGCQNTLLNQLCADACGI-RVIAG-P-VEASTLGNI 434 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHHTS-EEEEC-C-TTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHHCC-eeecC-C-ccHhHHHHH
Confidence 445666543 2233444444444433222454 467899999999999999999999996 55433 3 589999996
Q ss_pred HHHhh
Q 002367 412 LLAAN 416 (930)
Q Consensus 412 ~~aa~ 416 (930)
+.|+.
T Consensus 435 ~~A~~ 439 (489)
T 2uyt_A 435 GIQLM 439 (489)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
No 79
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=90.25 E-value=0.7 Score=42.25 Aligned_cols=78 Identities=21% Similarity=0.223 Sum_probs=60.7
Q ss_pred hhcchHHHHHHHHHHHHHHHHHhccccCCCCCChhhhHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHH
Q 002367 752 LTARPASVEHAQKYLGQLQQIVNDWETNKPWLPKDRTDEVLKDSETFKSWLDEKENDQKKTSGFSKPAFTSEEVYEKILK 831 (930)
Q Consensus 752 ~~~rp~ai~~l~~~l~~~~~~~~~~~~~~~~it~~e~~~l~~~~~~~~~Wl~~~~~~Q~~~~~~~dP~~~~~di~~k~~~ 831 (930)
...|-++-..+..+|..+++.+.. +.-...++++++..|...|+++..||+.. +. -...+|+.+++.
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e-~~~~dkl~~eek~~I~~~i~el~~~L~~~---~~---------ad~e~ik~k~~e 79 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIED-EKLKDKISPEDKKKIEDKCDEILKWLDSN---QT---------AEKEEFEHQQKD 79 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTC-TTTGGGSCHHHHHHHHHHHHHHHHHHHHH---TT---------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-hhhhccCCHHHHHHHHHHHHHHHHHHHcC---Cc---------CCHHHHHHHHHH
Confidence 345567778899999999998865 11234689999999999999999999741 10 124789999999
Q ss_pred HHHHHHhhhcC
Q 002367 832 LQDKINSINRI 842 (930)
Q Consensus 832 l~~~~~~l~~k 842 (930)
|+..+.+|..+
T Consensus 80 L~~~~~~i~~k 90 (120)
T 2p32_A 80 LEGLANPIISK 90 (120)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999854
No 80
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=90.18 E-value=16 Score=39.41 Aligned_cols=68 Identities=16% Similarity=0.109 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCC--CccCCCC---CcchhhhcccHHHHhhhc
Q 002367 346 LWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR--TELDRHL---DADEAIVLGASLLAANLS 418 (930)
Q Consensus 346 ~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~--~~i~~~~---n~deaVa~GAa~~aa~ls 418 (930)
+.+.+...+.++++..+ ++.|+|.||.+...++++.|.+.+.. -++..+. -.|-+++.|+|.+.....
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~ 305 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKS 305 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHc
Confidence 44555566666666554 46899999999999999999988732 1333222 458899999987655433
No 81
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=89.66 E-value=1 Score=48.51 Aligned_cols=55 Identities=13% Similarity=0.213 Sum_probs=35.6
Q ss_pred HHHHHHHHcCCCeeEEechhhHHHHHh-ccccCCCCCCcEEEEEEcCCCceEEEEEE
Q 002367 179 GLMQAAELAGMNVLSLVNEHSGAALQY-GIDKDFSNESRHVVFYDMGATTTYAALVY 234 (930)
Q Consensus 179 al~~Aa~~AGl~~l~Li~EptAAAl~y-~~~~~~~~~~~~vlv~D~GggT~dvsvv~ 234 (930)
.+..+-+..|+++ .+|+...=|.+.| +....+.......+|+|+|||+|.+++++
T Consensus 94 fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~ 149 (315)
T 3mdq_A 94 LIDRIKKEVNIDV-EVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGN 149 (315)
T ss_dssp HHHHHHHHHCCCE-EECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEEC
T ss_pred HHHHHHHHHCCCe-EEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEE
Confidence 3444445579987 6776555444444 33222222235799999999999999983
No 82
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=89.65 E-value=0.88 Score=46.32 Aligned_cols=68 Identities=13% Similarity=0.185 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHHhccccCCCCCChhhhHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHHH
Q 002367 757 ASVEHAQKYLGQLQQIVNDWETNKPWLPKDRTDEVLKDSETFKSWLDEKENDQKKTSGFSKPAFTSEEVYEKILKLQDKI 836 (930)
Q Consensus 757 ~ai~~l~~~l~~~~~~~~~~~~~~~~it~~e~~~l~~~~~~~~~Wl~~~~~~Q~~~~~~~dP~~~~~di~~k~~~l~~~~ 836 (930)
++...+..++..++..+..+. ..++.+++..+...++++..||+.. ...+|+.+++.|+..+
T Consensus 146 e~kn~le~~i~~~~~~l~~~~---~~l~~~~k~~i~~~l~~~~~~L~~~---------------~~~~i~~~~~~L~~~~ 207 (219)
T 4e81_A 146 QTRNQGDHLLHSTRKQVEEAG---DKLPADDKTAIESALTALETALKGE---------------DKAAIEAKMQELAQVS 207 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG---GGSCHHHHHHHHHHHHHHHHHHHSS---------------CHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhh---hhCCHHHHHHHHHHHHHHHHHHhcC---------------CHHHHHHHHHHHHHHH
Confidence 445667777777777776532 3688999999999999999999852 3689999999999999
Q ss_pred HhhhcC
Q 002367 837 NSINRI 842 (930)
Q Consensus 837 ~~l~~k 842 (930)
.++..+
T Consensus 208 ~~i~~~ 213 (219)
T 4e81_A 208 QKLMEI 213 (219)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998753
No 83
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=89.21 E-value=0.82 Score=41.20 Aligned_cols=72 Identities=19% Similarity=0.302 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCCCChhhhHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHHHH
Q 002367 758 SVEHAQKYLGQLQQIVNDWETNKPWLPKDRTDEVLKDSETFKSWLDEKENDQKKTSGFSKPAFTSEEVYEKILKLQDKIN 837 (930)
Q Consensus 758 ai~~l~~~l~~~~~~~~~~~~~~~~it~~e~~~l~~~~~~~~~Wl~~~~~~Q~~~~~~~dP~~~~~di~~k~~~l~~~~~ 837 (930)
+-..+..+|..+++.+.. .+-...++++++..|...|+++..||+..... ...+|+.+++.|+..+.
T Consensus 5 arN~aE~~iy~~e~~L~~-~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~a------------d~~~i~~~~~~L~~~~~ 71 (113)
T 1ud0_A 5 GSHMLESYAFNMKATVED-EKLQGKINDEDKQKILDKCNEIISWLDKNQTA------------EKEEFEHQQKELEKVCN 71 (113)
T ss_dssp CHHHHHHHHHHHHHHHTS-GGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcc-hhhhccCCHHHHHHHHHHHHHHHHHHHcCCcc------------CHHHHHHHHHHHHHHHH
Confidence 446777888888888862 12245799999999999999999999743210 13689999999999999
Q ss_pred hhhcC
Q 002367 838 SINRI 842 (930)
Q Consensus 838 ~l~~k 842 (930)
+|..+
T Consensus 72 ~i~~~ 76 (113)
T 1ud0_A 72 PIITK 76 (113)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99754
No 84
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=89.14 E-value=4 Score=46.50 Aligned_cols=59 Identities=17% Similarity=0.133 Sum_probs=43.1
Q ss_pred CHHHHHHHHHHHHHcCCC--eeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEEEe
Q 002367 173 GQAERKGLMQAAELAGMN--VLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFS 236 (930)
Q Consensus 173 ~~~qR~al~~Aa~~AGl~--~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~ 236 (930)
+..-...|.+|.+.-|++ ++.++|+.+|++++.++.. +..++.+=+|-|+=-+-+..+.
T Consensus 184 G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~-----~~~~iglIlGTG~N~~y~e~~~ 244 (485)
T 3o8m_A 184 GHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD-----PQTKMGIIIGTGVNGAYYDVVS 244 (485)
T ss_dssp TSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC-----TTEEEEEEESSSEEEEEEEEGG
T ss_pred CccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC-----CCcEEEEEEecCcceEEEeecc
Confidence 455678899999888886 4789999999999865542 3567777778876655555543
No 85
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=87.46 E-value=3.2 Score=51.50 Aligned_cols=56 Identities=16% Similarity=0.197 Sum_probs=38.6
Q ss_pred CHHHHHHHHHHHHHc-CC--CeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEE
Q 002367 173 GQAERKGLMQAAELA-GM--NVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (930)
Q Consensus 173 ~~~qR~al~~Aa~~A-Gl--~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv 233 (930)
...-.+.|.+|...- |+ +++.|+|+.+|++++.+... +.+++.+=+|-|+=-.-+.
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~-----~~~~iglIlGTG~na~y~e 688 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE-----PTCEVGLIVGTGSNACYME 688 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC-----TTEEEEEEESSSEEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC-----CCcEEEEEEeCCeeEEEEE
Confidence 455577788887643 55 58999999999988765542 3567777778776544444
No 86
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=87.44 E-value=0.66 Score=53.28 Aligned_cols=72 Identities=11% Similarity=0.014 Sum_probs=50.3
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHH-hCCCccCCCCCcchhhhcccHHHHhh
Q 002367 340 EELCEDLWER--SLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEY-LGRTELDRHLDADEAIVLGASLLAAN 416 (930)
Q Consensus 340 e~l~~~~~~~--i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~-fg~~~i~~~~n~deaVa~GAa~~aa~ 416 (930)
..++.-+++. +.-.+..+++... ..+.|.++||+++.|...+++.+. ||. +|..+ ...|+.|+|||+.|+.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~----~~~~i~~~GG~a~s~~w~Qi~ADv~~g~-pV~~~-~~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIG----STGRILVEGRFAEADVFVRALASLRPDC-AVYTA-NAHNDVSFGALRLIDP 435 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTT----CCSEEEEESGGGGCHHHHHHHHHHSTTS-EEEEE-SSCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhc----CCCeEEEeCCcccCHHHHHHHhhhcCCC-eEEEc-CCCchHHHHHHHHhCc
Confidence 3444455542 3334444444332 126899999999999999999999 996 55444 4567899999999985
Q ss_pred h
Q 002367 417 L 417 (930)
Q Consensus 417 l 417 (930)
-
T Consensus 436 a 436 (482)
T 3h6e_A 436 G 436 (482)
T ss_dssp T
T ss_pred c
Confidence 3
No 87
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=86.77 E-value=1.4 Score=45.12 Aligned_cols=70 Identities=7% Similarity=0.060 Sum_probs=55.1
Q ss_pred chHHHHHHHHHHHHHHHHHhccccCCCCCChhhhHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHH
Q 002367 755 RPASVEHAQKYLGQLQQIVNDWETNKPWLPKDRTDEVLKDSETFKSWLDEKENDQKKTSGFSKPAFTSEEVYEKILKLQD 834 (930)
Q Consensus 755 rp~ai~~l~~~l~~~~~~~~~~~~~~~~it~~e~~~l~~~~~~~~~Wl~~~~~~Q~~~~~~~dP~~~~~di~~k~~~l~~ 834 (930)
+-.+...+..++..++..+..+ ...++++++..+...+++++.||+.. ...+++.+++.|+.
T Consensus 141 ~~e~kn~le~~i~~~~~~l~~~---~~~~~~~~k~~i~~~l~~~~~wl~~~---------------d~~~~~~~~~~L~~ 202 (227)
T 1u00_A 141 LAEQKVEAARVLESLHGALAAD---AALLSAAERQVIDDAAAHLSEVAQGD---------------DVDAIEQAIKNVDK 202 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHTTSS---------------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhh---hccCCHHHHHHHHHHHHHHHHHHhcC---------------CHHHHHHHHHHHHH
Confidence 3455667777888888877653 24689999999999999999999721 25789999999999
Q ss_pred HHHhhhcC
Q 002367 835 KINSINRI 842 (930)
Q Consensus 835 ~~~~l~~k 842 (930)
.+.++..+
T Consensus 203 ~~~~i~~r 210 (227)
T 1u00_A 203 QTQDFAAR 210 (227)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988753
No 88
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=84.29 E-value=2.1 Score=46.62 Aligned_cols=54 Identities=13% Similarity=0.160 Sum_probs=35.9
Q ss_pred HHHHHHHHcCCCeeEEechhhHHHHHh-ccccCCCC--CCcEEEEEEcCCCceEEEEE
Q 002367 179 GLMQAAELAGMNVLSLVNEHSGAALQY-GIDKDFSN--ESRHVVFYDMGATTTYAALV 233 (930)
Q Consensus 179 al~~Aa~~AGl~~l~Li~EptAAAl~y-~~~~~~~~--~~~~vlv~D~GggT~dvsvv 233 (930)
.+..+-+..|+++ .+|+..+=|.+.| +....+.. ....++++|+|||+|+++++
T Consensus 107 fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~ 163 (343)
T 3cer_A 107 FEDEIERILGVRP-EVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIG 163 (343)
T ss_dssp HHHHHHHHHSSCC-EECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEEC
T ss_pred HHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEe
Confidence 3444444569986 6887666665555 33222222 23569999999999999997
No 89
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=83.99 E-value=25 Score=40.65 Aligned_cols=42 Identities=17% Similarity=0.121 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhC
Q 002367 346 LWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLG 392 (930)
Q Consensus 346 ~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg 392 (930)
+++-+...+.++++..+ ++.|+|+||.+....+++.|.+.+.
T Consensus 232 ~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~~ 273 (540)
T 3en9_A 232 AFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMCE 273 (540)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHHH
Confidence 44445556666666655 4689999999999999999998764
No 90
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=81.15 E-value=11 Score=38.77 Aligned_cols=16 Identities=19% Similarity=0.246 Sum_probs=15.4
Q ss_pred EEEEEcCccceEEEEE
Q 002367 26 VSSVDLGSEWLKVAVV 41 (930)
Q Consensus 26 vvGIDfGTt~s~va~~ 41 (930)
.++||.|+|+++.+++
T Consensus 5 ~L~IDIGNT~ik~gl~ 20 (249)
T 3bex_A 5 YLLVDVGNTHSVFSIT 20 (249)
T ss_dssp EEEEEECSSEEEEEEE
T ss_pred EEEEEECCCeEEEEEE
Confidence 7999999999999998
No 91
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=80.84 E-value=3.2 Score=49.70 Aligned_cols=74 Identities=14% Similarity=0.175 Sum_probs=56.1
Q ss_pred chHHHHHHHHHHHHHHHHHhccccCCCCCChhhhHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHH
Q 002367 755 RPASVEHAQKYLGQLQQIVNDWETNKPWLPKDRTDEVLKDSETFKSWLDEKENDQKKTSGFSKPAFTSEEVYEKILKLQD 834 (930)
Q Consensus 755 rp~ai~~l~~~l~~~~~~~~~~~~~~~~it~~e~~~l~~~~~~~~~Wl~~~~~~Q~~~~~~~dP~~~~~di~~k~~~l~~ 834 (930)
|-++...|..++..++..+.. .-...+++++++.+...+++++.||.+.-.. -+..+++.|++.|+.
T Consensus 549 ~~~~~n~le~~i~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~-----------~~~~~~~~~~~~l~~ 615 (675)
T 3d2f_A 549 TEDRKNTLEEYIYTLRGKLEE--EYAPFASDAEKTKLQGMLNKAEEWLYDEGFD-----------SIKAKYIAKYEELAS 615 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT--TTGGGSCHHHHHHHHHHHHHHHHHTTTGGGG-----------CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHhhCCHHHHHHHHHHHHHHHHHHhcCCch-----------hhHHHHHHHHHHHHH
Confidence 345667788888888888864 1234689999999999999999999742110 135788999999999
Q ss_pred HHHhhhc
Q 002367 835 KINSINR 841 (930)
Q Consensus 835 ~~~~l~~ 841 (930)
.+.++..
T Consensus 616 ~~~~i~~ 622 (675)
T 3d2f_A 616 LGNIIRG 622 (675)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9888873
No 92
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=80.40 E-value=26 Score=36.16 Aligned_cols=45 Identities=16% Similarity=0.187 Sum_probs=29.5
Q ss_pred cCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEE
Q 002367 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (930)
Q Consensus 187 AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv 233 (930)
.|++ +.+.|+..|||++.............++++-+|.| +-.+++
T Consensus 114 ~~~p-V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtG-IG~giv 158 (267)
T 1woq_A 114 LGRP-VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTG-IGSAFI 158 (267)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcc-eEEEEE
Confidence 4777 47999999999984332211111236778888887 666666
No 93
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=78.18 E-value=8.6 Score=43.52 Aligned_cols=55 Identities=11% Similarity=-0.010 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHcCCC--eeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEEE
Q 002367 175 AERKGLMQAAELAGMN--VLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVY 234 (930)
Q Consensus 175 ~qR~al~~Aa~~AGl~--~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv~ 234 (930)
.-++.|.++.+.-|++ ++.++|+..|++++-... ...+++.+=+|-|+=-.-+..
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~-----~~~~~iglilGTGvgg~~i~~ 220 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYT-----DAXIKMGIIFGSGVNAAYWCD 220 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHH-----CTTEEEEEEESSSEEEEEEEC
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhc-----CCccEEEEEECcEEEEEEEEC
Confidence 4467777887666775 479999999999976552 235777777888855444443
No 94
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=77.26 E-value=2.5 Score=50.00 Aligned_cols=69 Identities=12% Similarity=0.145 Sum_probs=53.8
Q ss_pred chHHHHHHHHHHHHHHHHHhccccCCCCCChhhhHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHH
Q 002367 755 RPASVEHAQKYLGQLQQIVNDWETNKPWLPKDRTDEVLKDSETFKSWLDEKENDQKKTSGFSKPAFTSEEVYEKILKLQD 834 (930)
Q Consensus 755 rp~ai~~l~~~l~~~~~~~~~~~~~~~~it~~e~~~l~~~~~~~~~Wl~~~~~~Q~~~~~~~dP~~~~~di~~k~~~l~~ 834 (930)
+-++...+..++..++..+..+ ...+++++++.+.+.+++++.||+. + ...+++.+++.|+.
T Consensus 532 ~~~~~n~~e~~~~~~~~~l~~~---~~~~~~~~~~~i~~~~~~~~~~l~~----~-----------~~~~~~~~~~~l~~ 593 (605)
T 2kho_A 532 LVQTRNQGDHLLHSTRKQVEEA---GDKLPADDKTAIESALTALETALKG----E-----------DKAAIEAKMQELAQ 593 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHTTS----S-----------CHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhh---hccCCHHHHHHHHHHHHHHHHHHhc----C-----------CHHHHHHHHHHHHH
Confidence 3345566777777777777653 2358999999999999999999972 1 45889999999999
Q ss_pred HHHhhhc
Q 002367 835 KINSINR 841 (930)
Q Consensus 835 ~~~~l~~ 841 (930)
.+.++..
T Consensus 594 ~~~~~~~ 600 (605)
T 2kho_A 594 VSQKLME 600 (605)
T ss_dssp TCHHHHH
T ss_pred HHHHHHH
Confidence 8888764
No 95
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=75.48 E-value=5.6 Score=45.76 Aligned_cols=53 Identities=13% Similarity=0.159 Sum_probs=34.9
Q ss_pred HHHHHHHHcCCCeeEEechhhHHHHHh-ccccCCCCCCcEEEEEEcCCCceEEEEEE
Q 002367 179 GLMQAAELAGMNVLSLVNEHSGAALQY-GIDKDFSNESRHVVFYDMGATTTYAALVY 234 (930)
Q Consensus 179 al~~Aa~~AGl~~l~Li~EptAAAl~y-~~~~~~~~~~~~vlv~D~GggT~dvsvv~ 234 (930)
.+..+-+..|+++ .+|+..+=|.+.| |.-..++. ...+|+|+|||+|.++++.
T Consensus 105 fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~~~~--~~~lvvDIGGGStEl~~~~ 158 (508)
T 3hi0_A 105 FIREAEAILGCEI-EVLSGEKEALYSAYGVISGFYQ--PDGIAGDLGGGSLELIDIK 158 (508)
T ss_dssp HHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHHSSS--CEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhcCCC--CCeEEEEeCCCceEEEEee
Confidence 4444445679987 6777665555544 33222322 2359999999999999984
No 96
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=73.94 E-value=8.3 Score=45.43 Aligned_cols=67 Identities=13% Similarity=0.188 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCCCChhhhHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHHHH
Q 002367 758 SVEHAQKYLGQLQQIVNDWETNKPWLPKDRTDEVLKDSETFKSWLDEKENDQKKTSGFSKPAFTSEEVYEKILKLQDKIN 837 (930)
Q Consensus 758 ai~~l~~~l~~~~~~~~~~~~~~~~it~~e~~~l~~~~~~~~~Wl~~~~~~Q~~~~~~~dP~~~~~di~~k~~~l~~~~~ 837 (930)
+-..+..++..++..++.+ ...+++++++.+...+++++.||+.. ...+++.+++.|+..+.
T Consensus 535 ~~n~~e~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~---------------~~~~~~~~~~~l~~~~~ 596 (605)
T 4b9q_A 535 TRNQGDHLLHSTRKQVEEA---GDKLPADDKTAIESALTALETALKGE---------------DKAAIEAKMQELAQVSQ 596 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHSS---------------CHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHhh---hhhCCHHHHHHHHHHHHHHHHHHhcC---------------CHHHHHHHHHHHHHHHH
Confidence 3355666677777776643 23678999999999999999999731 15789999999999999
Q ss_pred hhhcC
Q 002367 838 SINRI 842 (930)
Q Consensus 838 ~l~~k 842 (930)
++..+
T Consensus 597 ~~~~~ 601 (605)
T 4b9q_A 597 KLMEI 601 (605)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98754
No 97
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=73.67 E-value=3.7 Score=44.91 Aligned_cols=44 Identities=14% Similarity=0.268 Sum_probs=28.8
Q ss_pred CCCeeEEechhhHHHHHh-----ccccCCC-CCCcEEEEEEcCCCceEEEEE
Q 002367 188 GMNVLSLVNEHSGAALQY-----GIDKDFS-NESRHVVFYDMGATTTYAALV 233 (930)
Q Consensus 188 Gl~~l~Li~EptAAAl~y-----~~~~~~~-~~~~~vlv~D~GggT~dvsvv 233 (930)
|+. +++|+...=|.+.| .+.. +. ..++.++|+|+|||+|.+++.
T Consensus 108 g~~-v~VIsG~eEa~~~~~gv~~~l~~-~~~~~~~t~~v~DiGGGStei~~~ 157 (353)
T 3aap_A 108 LVE-AKTITGNDEALFDWLAVNYKLDT-LKSVQNKSVGVMDMGGASVQIVFP 157 (353)
T ss_dssp EEE-EEECCHHHHHHHHHHHHHHHTTC-SSSCCSSCEEEEEECSSEEEEEEE
T ss_pred CCe-EEECChHHHHHHHHHHHHHHhhh-ccccccccEEEEEeCCCceEEEEe
Confidence 554 47777665544443 3322 21 233579999999999999997
No 98
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=70.93 E-value=4.2 Score=35.57 Aligned_cols=18 Identities=28% Similarity=0.416 Sum_probs=16.4
Q ss_pred ccEEEEEcCccceEEEEE
Q 002367 24 SAVSSVDLGSEWLKVAVV 41 (930)
Q Consensus 24 ~~vvGIDfGTt~s~va~~ 41 (930)
|.++|||||+..+.||+.
T Consensus 1 mriLglD~G~kriGvAvs 18 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVG 18 (98)
T ss_dssp CCEEEEEESSSEEEEEEE
T ss_pred CcEEEEEeCCCEEEEEEE
Confidence 358999999999999998
No 99
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=69.81 E-value=25 Score=36.73 Aligned_cols=48 Identities=27% Similarity=0.240 Sum_probs=32.3
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHhCCC------ccCCCCCcchhhhcccHHHHh
Q 002367 368 IYAVELIGGGTRVPKLQAKLQEYLGRT------ELDRHLDADEAIVLGASLLAA 415 (930)
Q Consensus 368 I~~ViLvGG~sriP~V~~~l~~~fg~~------~i~~~~n~deaVa~GAa~~aa 415 (930)
.+.|+|.||.+..+.+.+.|++.+... ++....-.+.+.++|||+.+.
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 287 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQ 287 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHHh
Confidence 457888888876677778887776542 222233346688999998753
No 100
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=69.64 E-value=12 Score=39.63 Aligned_cols=44 Identities=14% Similarity=0.151 Sum_probs=29.2
Q ss_pred cCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEE
Q 002367 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (930)
Q Consensus 187 AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv 233 (930)
.|+++ .+.|+..|||++-..... ....++++++-+|.| +-.+++
T Consensus 97 ~~~pV-~v~NDanaaalaE~~~G~-~~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 97 MXIPV-GFSTDVNAAALGEFLFGE-AXGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HCSCE-EEEEHHHHHHHHHHHHST-TTTCSCEEEEEESSS-EEEEEE
T ss_pred hCCCE-EEechhHHHHHHHHHhCC-CCCCCcEEEEEECCc-eEEEEE
Confidence 48874 799999999997433211 122367888888876 555555
No 101
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=66.54 E-value=27 Score=38.13 Aligned_cols=23 Identities=13% Similarity=0.271 Sum_probs=19.9
Q ss_pred hcCCCccEEEEEcCccceEEEEE
Q 002367 19 VSHSQSAVSSVDLGSEWLKVAVV 41 (930)
Q Consensus 19 ~~~~~~~vvGIDfGTt~s~va~~ 41 (930)
+......++|||+|.|++.++++
T Consensus 4 ~n~d~~~~lgiDIGgt~i~~~l~ 26 (366)
T 3mcp_A 4 YTNDNRIVMTLDAGGTNFVFSAI 26 (366)
T ss_dssp TTTCCCEEEEEECSSSEEEEEEE
T ss_pred CCCCCCEEEEEEECcceEEEEEE
Confidence 34566789999999999999999
No 102
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=66.10 E-value=22 Score=39.76 Aligned_cols=44 Identities=20% Similarity=0.208 Sum_probs=29.2
Q ss_pred cCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEE
Q 002367 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (930)
Q Consensus 187 AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv 233 (930)
.|+++ .+.|+..|||++-..... ......++++-+|.| +-.+++
T Consensus 208 ~~~pV-~v~NDa~aaalaE~~~g~-~~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLPV-FVANDTRAWALAEKLFGH-SQDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSCE-EEEEHHHHHHHHHHHHST-TTTCSSEEEEEESSS-EEEEEE
T ss_pred hCCCE-EEechhHHHHHHHHHhCC-CCCCCcEEEEEECCc-EEEEEE
Confidence 47775 799999999987433211 112357888888887 556665
No 103
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=65.08 E-value=12 Score=40.89 Aligned_cols=66 Identities=21% Similarity=0.152 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCc------cCCCCCcchhhhcccHHHHhh
Q 002367 346 LWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTE------LDRHLDADEAIVLGASLLAAN 416 (930)
Q Consensus 346 ~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~------i~~~~n~deaVa~GAa~~aa~ 416 (930)
+..-+...|.+.++... ..++.|+++||+.+.|.+.+.|++.++... +..+.+.-||++ -|+.|..
T Consensus 265 Lt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~a--FA~LA~~ 336 (371)
T 3qbx_A 265 LLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMA--FAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHH--HHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHH--HHHHHHH
Confidence 33333444455554432 135789999999999999999999997432 233344445544 4555543
No 104
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=62.99 E-value=11 Score=45.43 Aligned_cols=65 Identities=14% Similarity=0.156 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCC--ccCCCC---CcchhhhcccHHHHhhhcC
Q 002367 350 SLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRT--ELDRHL---DADEAIVLGASLLAANLSD 419 (930)
Q Consensus 350 i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~--~i~~~~---n~deaVa~GAa~~aa~ls~ 419 (930)
+...+.++.+..+ ++.|+|.||....-.+.+.|.+.+... ++..+. --|..+|+|+|++|+..-.
T Consensus 693 L~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~L~ 762 (772)
T 4g9i_A 693 FAHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLYLE 762 (772)
T ss_dssp HHHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHHHh
Confidence 4445555555444 567999999999999999999987543 232221 2489999999998876433
No 105
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=61.78 E-value=46 Score=37.57 Aligned_cols=55 Identities=20% Similarity=0.229 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHHHcC---CCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEE
Q 002367 173 GQAERKGLMQAAELAG---MNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (930)
Q Consensus 173 ~~~qR~al~~Aa~~AG---l~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv 233 (930)
+..-.+.|.+|.+.-| ++++.|+|+.+|..++.+... +...+-+=+|-||= ++.+
T Consensus 183 G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~-----~~~~iGlI~GTGtN-a~Y~ 240 (470)
T 3f9m_A 183 GNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED-----HQCEVGMIVGTGCN-ACYM 240 (470)
T ss_dssp TSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC-----TTEEEEEEESSSEE-EEEE
T ss_pred CccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC-----CCceEEEEEecCCc-eEEe
Confidence 4455788889988887 368899999999877655432 24555555777755 4444
No 106
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=61.71 E-value=13 Score=40.66 Aligned_cols=69 Identities=17% Similarity=0.169 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCC------ccCCCCCcchhhhcccHHHH
Q 002367 341 ELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRT------ELDRHLDADEAIVLGASLLA 414 (930)
Q Consensus 341 ~l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~------~i~~~~n~deaVa~GAa~~a 414 (930)
++..-+..=+...|.+.+.... ....|+++||+++.|.+.+.|++.++.. .+..+.+.-||+|. |+.|
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aF--A~LA 340 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAF--AWLA 340 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHH--HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHH--HHHH
Confidence 3334444444555556665432 3568999999999999999999999652 33334556666666 4444
Q ss_pred h
Q 002367 415 A 415 (930)
Q Consensus 415 a 415 (930)
.
T Consensus 341 ~ 341 (370)
T 3cqy_A 341 M 341 (370)
T ss_dssp H
T ss_pred H
Confidence 4
No 107
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=60.82 E-value=52 Score=35.24 Aligned_cols=44 Identities=14% Similarity=0.033 Sum_probs=29.1
Q ss_pred cCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEE
Q 002367 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (930)
Q Consensus 187 AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv 233 (930)
.|++ +.+.|+..|||++...... ......++++-+|.| +-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~-~~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQ-GKGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTST-TTTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCC-CCCCCcEEEEEECCC-EEEEEE
Confidence 4777 4799999999987433211 112356888888887 556665
No 108
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=59.77 E-value=73 Score=35.61 Aligned_cols=60 Identities=22% Similarity=0.246 Sum_probs=39.3
Q ss_pred CCCCCHHHHHHHHHHHHHcC---CCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEE
Q 002367 169 PPYFGQAERKGLMQAAELAG---MNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (930)
Q Consensus 169 Pa~f~~~qR~al~~Aa~~AG---l~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv 233 (930)
|..-...-.+.|.+|.+.-| ++++.++|+.+|+.++.+... +...+-+=+|-||=-+-+.
T Consensus 155 ~~~~G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~-----~~~~iglIlGTGtNa~y~e 217 (445)
T 3hm8_A 155 SDCEGQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED-----PRCEIGLIVGTGTNACYME 217 (445)
T ss_dssp BTCTTSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC-----TTEEEEEEESSSEEEEEEE
T ss_pred CCCCCCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC-----CCceEEEEEeCCceEEEEE
Confidence 33334455778888887653 567899999999988755432 2456666677775444333
No 109
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=57.07 E-value=9.7 Score=43.05 Aligned_cols=56 Identities=9% Similarity=0.180 Sum_probs=33.9
Q ss_pred HHHHHHHHHH-c---CC--CeeEEechhhHHHHHh-----ccccCCC----------CCCcEEEEEEcCCCceEEEEE
Q 002367 177 RKGLMQAAEL-A---GM--NVLSLVNEHSGAALQY-----GIDKDFS----------NESRHVVFYDMGATTTYAALV 233 (930)
Q Consensus 177 R~al~~Aa~~-A---Gl--~~l~Li~EptAAAl~y-----~~~~~~~----------~~~~~vlv~D~GggT~dvsvv 233 (930)
+..++++++. . || ..+++|+..+=|.+.| .+.. +. .....++|+|+|||+|.++..
T Consensus 131 ~~~~L~~v~~~l~~~~f~~~~v~VIsG~eEa~y~wl~vn~~lg~-~~~~~~~~~~~~~~~~t~gvlDlGGgStqi~~~ 207 (456)
T 3cj1_A 131 TARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWVTANYLLEN-FIKYGWVGRWIRPRKGTLGAMDLGGASTQITFE 207 (456)
T ss_dssp HHHHHHHHHHHHTTSSSEEEEEEECCHHHHHHHHHHHHHHHTTT-TSCCEETTEECSSCCCCCEEEEECSSEEEEEEE
T ss_pred HHHHHHHHHHHHhhCCCCcCceEEcCchHHhhhhHHHHHhhhcc-cccccccccccccCCCceEEEEcCCCceEEEec
Confidence 4445555443 2 44 3468888665554443 3332 10 113568999999999999987
No 110
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=55.37 E-value=23 Score=42.68 Aligned_cols=65 Identities=25% Similarity=0.206 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCC--CccCC---CCCcchhhhcccHHHHhhhc
Q 002367 349 RSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR--TELDR---HLDADEAIVLGASLLAANLS 418 (930)
Q Consensus 349 ~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~--~~i~~---~~n~deaVa~GAa~~aa~ls 418 (930)
.+.+.+.++.+..+ ++.|+|+||.+....+++.|.+.+.. -++.. ..-.|-++|+|.|++|+...
T Consensus 680 ~L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 680 FTYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp HHHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 33444444444443 56899999999999999999988732 12221 23358899999999987544
No 111
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=55.00 E-value=28 Score=41.03 Aligned_cols=66 Identities=26% Similarity=0.287 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccC---CCCCcchhhhcccHHHHhh
Q 002367 346 LWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELD---RHLDADEAIVLGASLLAAN 416 (930)
Q Consensus 346 ~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~---~~~n~deaVa~GAa~~aa~ 416 (930)
+.+.+.+.+.++.+.. .++.|+|+||.+...++++.|.+.+.+-++. ..+-.|-++++|.|++|+.
T Consensus 583 la~~L~~~~~ra~~~~-----g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 583 LAQGFAALMREQATMR-----GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHHHTT-----TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-----CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 3344444445555444 3568999999999999999999988422332 2334589999999998864
No 112
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=53.20 E-value=6.6 Score=37.21 Aligned_cols=18 Identities=33% Similarity=0.455 Sum_probs=16.8
Q ss_pred ccEEEEEcCccceEEEEE
Q 002367 24 SAVSSVDLGSEWLKVAVV 41 (930)
Q Consensus 24 ~~vvGIDfGTt~s~va~~ 41 (930)
|.++|||+|+..|++|+.
T Consensus 3 mriLGiDpG~~riGvAv~ 20 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALS 20 (150)
T ss_dssp EEEEEEEECSSEEEEEEE
T ss_pred CEEEEEEccCCEEEEEEE
Confidence 579999999999999998
No 113
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=50.61 E-value=21 Score=40.15 Aligned_cols=42 Identities=17% Similarity=0.328 Sum_probs=26.8
Q ss_pred eeEEechhhHHH-----HHhccccCCCC-CCcEEEEEEcCCCceEEEEE
Q 002367 191 VLSLVNEHSGAA-----LQYGIDKDFSN-ESRHVVFYDMGATTTYAALV 233 (930)
Q Consensus 191 ~l~Li~EptAAA-----l~y~~~~~~~~-~~~~vlv~D~GggT~dvsvv 233 (930)
-+++|+...=+. ++|.+.. +.. ....+.++|||||++.++..
T Consensus 151 ~v~iisG~eEg~y~wi~vnyllg~-l~~~~~~t~g~lDlGGgStQi~f~ 198 (452)
T 3zx3_A 151 GAKIITGQEEGAYGWITINYLLGR-FKTPGGSTFGALDLGGASTQITFV 198 (452)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTT-TC---CCCCEEEEECSSEEEEEEC
T ss_pred ceEECCchhhhhhhHHHHHhhhcc-ccCCCCCceEEEecCCCceEEEec
Confidence 367887554443 3444432 111 23568899999999999987
No 114
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=49.95 E-value=65 Score=31.85 Aligned_cols=48 Identities=17% Similarity=0.197 Sum_probs=30.0
Q ss_pred hhHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHH
Q 002367 787 RTDEVLKDSETFKSWLDEKENDQKKTSGFSKPAFTSEEVYEKILKLQDK 835 (930)
Q Consensus 787 e~~~l~~~~~~~~~Wl~~~~~~Q~~~~~~~dP~~~~~di~~k~~~l~~~ 835 (930)
.+..+...+.+...|++++...-.... +.++.-.+.-+..|...|+..
T Consensus 106 ~L~~f~~~~~~~~~Wl~eke~~~~s~d-~g~~~~~v~~l~~k~~~f~~e 153 (210)
T 3pdy_A 106 SLHSFVAAATKELMWLNEKEEEEVGFD-WSDRNTNMTAKKESYSALMRE 153 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSC-CSTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccc-cCCCchhHHHHHHHHHHHHHH
Confidence 356677788899999999887665533 333444455555555444443
No 115
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=47.71 E-value=12 Score=34.83 Aligned_cols=17 Identities=29% Similarity=0.442 Sum_probs=16.1
Q ss_pred cEEEEEcCccceEEEEE
Q 002367 25 AVSSVDLGSEWLKVAVV 41 (930)
Q Consensus 25 ~vvGIDfGTt~s~va~~ 41 (930)
.++|||||+..+.||+.
T Consensus 4 ~iLglD~G~kriGvAvs 20 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVG 20 (138)
T ss_dssp EEEEEECCSSEEEEEEE
T ss_pred eEEEEEeCCCEEEEEEE
Confidence 59999999999999998
No 116
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=47.60 E-value=17 Score=35.03 Aligned_cols=19 Identities=32% Similarity=0.435 Sum_probs=17.0
Q ss_pred ccEEEEEcCccceEEEEEE
Q 002367 24 SAVSSVDLGSEWLKVAVVN 42 (930)
Q Consensus 24 ~~vvGIDfGTt~s~va~~~ 42 (930)
|.|+|||.|++++..+++.
T Consensus 1 MrILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccccCceEEEEEE
Confidence 4699999999999999983
No 117
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=45.45 E-value=14 Score=35.23 Aligned_cols=19 Identities=21% Similarity=0.310 Sum_probs=17.0
Q ss_pred ccEEEEEcCccceEEEEEE
Q 002367 24 SAVSSVDLGSEWLKVAVVN 42 (930)
Q Consensus 24 ~~vvGIDfGTt~s~va~~~ 42 (930)
|.|+|||-|++++..+++.
T Consensus 1 m~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccCCCCeeEEEEE
Confidence 4699999999999999983
No 118
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=45.38 E-value=21 Score=37.93 Aligned_cols=49 Identities=12% Similarity=0.032 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCC
Q 002367 342 LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (930)
Q Consensus 342 l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~ 393 (930)
+.+.....+...|+++|+++++++++|++|+..|+++++ -+.+.+.||.
T Consensus 212 ~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~ 260 (317)
T 1hnj_A 212 VFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLGM 260 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCC
Confidence 334456678889999999999999999999999998664 4578888875
No 119
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=44.84 E-value=1.8e+02 Score=30.07 Aligned_cols=149 Identities=10% Similarity=0.108 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhHHhHHHHHHhhccCcccccccCCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 002367 649 KEALVDAEAKLEEL--DKKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDA 726 (930)
Q Consensus 649 ~~~l~~~~~~l~~~--~~~D~~~~~~~eakN~LEs~iY~~r~~l~~~~~~~~~~~~~er~~l~~~l~e~~~WL~~~g~~a 726 (930)
...++.++.+|.-+ .-+++.+...++.+..|..|.=++|.+|... .+.+...|.-+-+=|-..
T Consensus 65 ~~~~eelr~kL~p~~~el~~~l~~~~eeLr~~L~p~~eelr~kl~~~-----------veelk~~L~Py~eelr~k---- 129 (273)
T 3s84_A 65 NTQAEQLRRQLTPYAQRMERVLRENADSLQASLRPHADELKAKIDQN-----------VEELKGRLTPYADEFKVK---- 129 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHH----
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhh-----------HHHHHHHhHhHHHHHHHH----
Q ss_pred CHHHHHHHHHHHHhccchHHHhHHh-------------hhcchHHHHHHHHHHHHHHHHHhccccCCCCCChhhhHHHHH
Q 002367 727 TAKEFQERLDVLKAIGDPVFFRFKE-------------LTARPASVEHAQKYLGQLQQIVNDWETNKPWLPKDRTDEVLK 793 (930)
Q Consensus 727 ~~~~~~~kl~~L~~~~~pi~~R~~e-------------~~~rp~ai~~l~~~l~~~~~~~~~~~~~~~~it~~e~~~l~~ 793 (930)
+..++.+|+....|....+.+ ...-...=+.+...+..++..+.-+.+.. ...|..
T Consensus 130 ----~~~~leeLr~~l~P~ae~~~~kl~~~~e~L~~ql~~~a~~L~~~l~~~~eeLr~~L~p~ae~l-------r~~l~~ 198 (273)
T 3s84_A 130 ----IDQTVEELRRSLAPYAQDTQEKLNHQLEGLTFQMKKNAEELKARISASAEELRQRLAPLAEDV-------RGNLRG 198 (273)
T ss_dssp ----HHHHHHHHHHHHGGGCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHTSSS
T ss_pred ----HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHH
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHHHHhh
Q 002367 794 DSETFKSWLDEKENDQKKTSGFSKPAFTSEEVYEKILKLQDKINSI 839 (930)
Q Consensus 794 ~~~~~~~Wl~~~~~~Q~~~~~~~dP~~~~~di~~k~~~l~~~~~~l 839 (930)
.++++..||.+.- ..|..++..+.+.+.+.
T Consensus 199 ~~e~l~~~l~~~~----------------~~~~qq~e~f~~~~~p~ 228 (273)
T 3s84_A 199 NTEGLQKSLAELG----------------GHLDQQVEEFRRRVEPY 228 (273)
T ss_dssp CHHHHHHHHHHHH----------------HHHHHHHHHHHHHHTTH
T ss_pred HHHHHHHhHHHHH----------------HHHHHHHHHHHHHhHhh
No 120
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=44.78 E-value=1.4e+02 Score=31.28 Aligned_cols=38 Identities=11% Similarity=0.024 Sum_probs=21.9
Q ss_pred HHHHhHHhHHHHHHhhccCcccccccCCHHHHHHHHHHHHH
Q 002367 674 ELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDE 714 (930)
Q Consensus 674 eakN~LEs~iY~~r~~l~~~~~~~~~~~~~er~~l~~~l~e 714 (930)
..-.+|++.|.+.+..|...+ |. ..+.....+..+...
T Consensus 11 ~~~~el~~Wl~e~~~~l~~~~-~g--~d~~~~~~ll~kh~~ 48 (326)
T 3kbt_A 11 LDADEAEAWIGEQELYVISDE-IP--KDEEGAIVMLKRHLR 48 (326)
T ss_dssp HHHHHHHHHHHHHHHTTSCCC-CC--SSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCc-cC--CCHHHHHHHHHHHHH
Confidence 345678888888888887643 43 234444444444433
No 121
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=43.92 E-value=42 Score=38.92 Aligned_cols=79 Identities=16% Similarity=0.104 Sum_probs=52.3
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCccC-CCCCcchhhhcccHHH
Q 002367 336 RQKFEELCED-LWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELD-RHLDADEAIVLGASLL 413 (930)
Q Consensus 336 R~efe~l~~~-~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i~-~~~n~deaVa~GAa~~ 413 (930)
+.++-..++. +.+-+...+..+++..+ ++.|.|.||.+..-.+.+.|.+..+...+. .+.-.|.++++|+|++
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 3344333333 33334455555555544 568999999999999999998765532222 2345689999999999
Q ss_pred HhhhcC
Q 002367 414 AANLSD 419 (930)
Q Consensus 414 aa~ls~ 419 (930)
+....+
T Consensus 355 a~~~~g 360 (576)
T 3ven_A 355 VAVELG 360 (576)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 887644
No 122
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=42.27 E-value=15 Score=42.04 Aligned_cols=20 Identities=15% Similarity=0.204 Sum_probs=17.6
Q ss_pred CccEEEEEcCccceEEEEEE
Q 002367 23 QSAVSSVDLGSEWLKVAVVN 42 (930)
Q Consensus 23 ~~~vvGIDfGTt~s~va~~~ 42 (930)
+..++|||+|||++++++++
T Consensus 3 m~~~lgIDiGtts~K~~l~d 22 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYD 22 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEEecCCceEEEEEc
Confidence 34699999999999999994
No 123
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=41.50 E-value=12 Score=42.66 Aligned_cols=20 Identities=25% Similarity=0.283 Sum_probs=17.6
Q ss_pred CccEEEEEcCccceEEEEEE
Q 002367 23 QSAVSSVDLGSEWLKVAVVN 42 (930)
Q Consensus 23 ~~~vvGIDfGTt~s~va~~~ 42 (930)
+..++|||+|||++++++++
T Consensus 3 ~~~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEE
T ss_pred cceEEEEEecCCCceEEEEE
Confidence 44689999999999999984
No 124
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=39.58 E-value=15 Score=38.71 Aligned_cols=24 Identities=21% Similarity=0.340 Sum_probs=16.3
Q ss_pred hhcCCCccEEEEEcCccceEEEEE
Q 002367 18 LVSHSQSAVSSVDLGSEWLKVAVV 41 (930)
Q Consensus 18 ~~~~~~~~vvGIDfGTt~s~va~~ 41 (930)
+++......+|||+|+|.+++++.
T Consensus 14 ~~~~~~~~~iGIDiGsTt~K~V~~ 37 (287)
T 2ews_A 14 LVPRGSHMKVGIDAGGTLIKIVQE 37 (287)
T ss_dssp -------CEEEEEECSSEEEEEEE
T ss_pred cccCCCCeEEEEEEChhhEEEEEE
Confidence 344456779999999999999998
No 125
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=38.16 E-value=1.4e+02 Score=28.13 Aligned_cols=65 Identities=26% Similarity=0.302 Sum_probs=42.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHhhccCcccccccCCHHHHHHHHHHHHHHHHHHh
Q 002367 646 SLSKEALVDAEAKLEELDKKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLY 720 (930)
Q Consensus 646 ~ls~~~l~~~~~~l~~~~~~D~~~~~~~eakN~LEs~iY~~r~~l~~~~~~~~~~~~~er~~l~~~l~e~~~WL~ 720 (930)
|...+++...-..++.-...|...|++ |-.+..-+.+.+-+..+...++-+.|.+.++++..-|.
T Consensus 21 p~~~~elik~L~~le~sassDa~vrq~----------Ia~LP~eVsd~s~l~klkDk~~~e~l~~~veeA~~~L~ 85 (152)
T 4fla_A 21 PLLTEELIKALQDLENAASGDATVRQK----------IASLPQEVQDVSLLEKITDKEAAERLSKTVDEACLLLA 85 (152)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHH----------HHTSCGGGTCGGGGGGCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhccccchHHHHHH----------HHcCCccccCHHHHHHcccHHHHHHHHHHHHHHHHHHH
Confidence 566677777777888888899988766 33445555555435555555556777777776665553
No 126
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=38.15 E-value=29 Score=36.57 Aligned_cols=46 Identities=26% Similarity=0.174 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCC
Q 002367 345 DLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (930)
Q Consensus 345 ~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~ 393 (930)
.....+...++++|++++++++||+.|++.|+++++ -+.+.+.||.
T Consensus 207 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg~ 252 (309)
T 2ebd_A 207 VAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLNI 252 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCC
Confidence 345677788999999999999999999999998764 3567788875
No 127
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=37.59 E-value=27 Score=37.12 Aligned_cols=47 Identities=17% Similarity=0.093 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCC
Q 002367 344 EDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (930)
Q Consensus 344 ~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~ 393 (930)
+-....+...++++|+++++++++|+.|++.|+++++ -+.+.+.||.
T Consensus 216 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~ 262 (322)
T 1ub7_A 216 KFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLGL 262 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCC
Confidence 3445677888999999999999999999999988654 4567788875
No 128
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=37.35 E-value=18 Score=41.99 Aligned_cols=20 Identities=25% Similarity=0.338 Sum_probs=17.7
Q ss_pred CccEEEEEcCccceEEEEEE
Q 002367 23 QSAVSSVDLGSEWLKVAVVN 42 (930)
Q Consensus 23 ~~~vvGIDfGTt~s~va~~~ 42 (930)
+..++|||+|||++++++++
T Consensus 4 ~~~~lgIDiGtts~ka~l~d 23 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFD 23 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEE
T ss_pred CcEEEEEEECcccEEEEEEC
Confidence 45799999999999999994
No 129
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=37.10 E-value=19 Score=41.70 Aligned_cols=21 Identities=19% Similarity=0.314 Sum_probs=18.1
Q ss_pred CCccEEEEEcCccceEEEEEE
Q 002367 22 SQSAVSSVDLGSEWLKVAVVN 42 (930)
Q Consensus 22 ~~~~vvGIDfGTt~s~va~~~ 42 (930)
.+..++|||+||+.+++++++
T Consensus 8 ~~~~~lgID~GTts~Ka~l~d 28 (538)
T 4bc3_A 8 PRRCCLGWDFSTQQVKVVAVD 28 (538)
T ss_dssp -CCEEEEEEECSSEEEEEEEE
T ss_pred CCCEEEEEEEcCcCEEEEEEC
Confidence 356899999999999999994
No 130
>2nr5_A Hypothetical protein SO2669; PSI-2, MCSG, MAD, structural G protein structure initiative, midwest center for structural genomics; 1.90A {Shewanella oneidensis} SCOP: a.25.6.1
Probab=36.09 E-value=1.3e+02 Score=22.40 Aligned_cols=27 Identities=19% Similarity=0.560 Sum_probs=19.1
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHhhcC
Q 002367 697 EKVSTSEERQSFVEKLDEAQEWLYTDG 723 (930)
Q Consensus 697 ~~~~~~~er~~l~~~l~e~~~WL~~~g 723 (930)
.+-+.-++.+-..+.+.+.++||..+.
T Consensus 38 sdssdmqeveiwtnrikeledwlwges 64 (67)
T 2nr5_A 38 SDSSDMQEVEIWTNRIKELEDWLWGES 64 (67)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CcchhhHHHHHHHHHHHHHHHHhhcCC
Confidence 344555677888899999999998763
No 131
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=35.77 E-value=18 Score=41.63 Aligned_cols=18 Identities=17% Similarity=0.307 Sum_probs=16.6
Q ss_pred ccEEEEEcCccceEEEEE
Q 002367 24 SAVSSVDLGSEWLKVAVV 41 (930)
Q Consensus 24 ~~vvGIDfGTt~s~va~~ 41 (930)
-.+||||+||++++++++
T Consensus 4 kYvlgID~GTss~Ka~l~ 21 (526)
T 3ezw_A 4 KYIVALDQGTTSSRAVVM 21 (526)
T ss_dssp CEEEEEEECSSEEEEEEE
T ss_pred eEEEEEEccccceeeeEE
Confidence 468999999999999998
No 132
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=35.72 E-value=16 Score=42.53 Aligned_cols=20 Identities=20% Similarity=0.311 Sum_probs=17.3
Q ss_pred CccEEEEEcCccceEEEEEE
Q 002367 23 QSAVSSVDLGSEWLKVAVVN 42 (930)
Q Consensus 23 ~~~vvGIDfGTt~s~va~~~ 42 (930)
...+||||+|||++++++++
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d 23 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLID 23 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEecCCcceEEEEEE
Confidence 35799999999999999993
No 133
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=35.15 E-value=89 Score=25.38 Aligned_cols=46 Identities=20% Similarity=0.242 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHhhccCcccccccCC
Q 002367 653 VDAEAKLEELDKKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVST 701 (930)
Q Consensus 653 ~~~~~~l~~~~~~D~~~~~~~eakN~LEs~iY~~r~~l~~~~~~~~~~~ 701 (930)
....++.+++.++|...++++......|+-|-.+|..|+. |..+++
T Consensus 26 ~~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDK---frSVl~ 71 (72)
T 3nmd_A 26 YALQEKIEELRQRDALIDELELELDQKDELIQMLQNELDK---YRSVIR 71 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhccCC
Confidence 4455778889999999999999999999999999999863 666654
No 134
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=35.13 E-value=18 Score=41.54 Aligned_cols=18 Identities=17% Similarity=0.307 Sum_probs=16.7
Q ss_pred ccEEEEEcCccceEEEEE
Q 002367 24 SAVSSVDLGSEWLKVAVV 41 (930)
Q Consensus 24 ~~vvGIDfGTt~s~va~~ 41 (930)
..++|||+|||+++++++
T Consensus 3 ~~~lgIDiGtts~k~~l~ 20 (510)
T 2p3r_A 3 KYIVALDQGTTSSRAVVM 20 (510)
T ss_dssp CEEEEEEECSSEEEEEEE
T ss_pred cEEEEEEcCCcceEEEEE
Confidence 468999999999999999
No 135
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=34.87 E-value=19 Score=41.34 Aligned_cols=19 Identities=32% Similarity=0.382 Sum_probs=17.3
Q ss_pred CccEEEEEcCccceEEEEE
Q 002367 23 QSAVSSVDLGSEWLKVAVV 41 (930)
Q Consensus 23 ~~~vvGIDfGTt~s~va~~ 41 (930)
...++|||+|||+++++++
T Consensus 4 ~~~~lgIDiGtts~ka~l~ 22 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVT 22 (515)
T ss_dssp SCEEEEEEECSSEEEEEEE
T ss_pred CcEEEEEEeccccEEEEEE
Confidence 4569999999999999999
No 136
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=34.45 E-value=17 Score=41.96 Aligned_cols=18 Identities=17% Similarity=0.287 Sum_probs=16.7
Q ss_pred ccEEEEEcCccceEEEEE
Q 002367 24 SAVSSVDLGSEWLKVAVV 41 (930)
Q Consensus 24 ~~vvGIDfGTt~s~va~~ 41 (930)
..++|||+|||+++++++
T Consensus 26 ~~~lgIDiGtts~k~~l~ 43 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVF 43 (520)
T ss_dssp CEEEEEEECSSEEEEEEE
T ss_pred CeEEEEEeCCcceEEEEE
Confidence 369999999999999998
No 137
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=34.44 E-value=67 Score=33.72 Aligned_cols=47 Identities=17% Similarity=0.042 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCC
Q 002367 344 EDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (930)
Q Consensus 344 ~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~ 393 (930)
......+...++++|++++++++||+.|++.|+++++ -+.+.+.||.
T Consensus 208 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~ 254 (313)
T 1zow_A 208 KFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRI---MESARERLGI 254 (313)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCC
Confidence 3455677888999999999999999999999998654 3557777874
No 138
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=34.24 E-value=19 Score=41.36 Aligned_cols=18 Identities=22% Similarity=0.398 Sum_probs=16.8
Q ss_pred ccEEEEEcCccceEEEEE
Q 002367 24 SAVSSVDLGSEWLKVAVV 41 (930)
Q Consensus 24 ~~vvGIDfGTt~s~va~~ 41 (930)
..++|||+|||+++++++
T Consensus 5 ~~~lgIDiGtts~k~~l~ 22 (511)
T 3hz6_A 5 FYIATFDIGTTEVKAALA 22 (511)
T ss_dssp CEEEEEEECSSEEEEEEE
T ss_pred cEEEEEEeCCCceEEEEE
Confidence 479999999999999998
No 139
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=34.19 E-value=20 Score=40.75 Aligned_cols=18 Identities=33% Similarity=0.418 Sum_probs=15.6
Q ss_pred ccEEEEEcCccceEEEEE
Q 002367 24 SAVSSVDLGSEWLKVAVV 41 (930)
Q Consensus 24 ~~vvGIDfGTt~s~va~~ 41 (930)
..++|||+|||+++++++
T Consensus 6 ~~~lgIDiGTts~Ka~l~ 23 (482)
T 3h6e_A 6 GATIVIDLGKTLSKVSLW 23 (482)
T ss_dssp --CEEEEECSSEEEEEEE
T ss_pred ceEEEEEcCCCCeEEEEE
Confidence 369999999999999998
No 140
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=33.73 E-value=21 Score=40.91 Aligned_cols=20 Identities=15% Similarity=0.326 Sum_probs=17.7
Q ss_pred CccEEEEEcCccceEEEEEE
Q 002367 23 QSAVSSVDLGSEWLKVAVVN 42 (930)
Q Consensus 23 ~~~vvGIDfGTt~s~va~~~ 42 (930)
...++|||+|||++++++++
T Consensus 4 ~~~~lgIDiGtts~k~~l~d 23 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFD 23 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEEcCCCceEEEEEC
Confidence 45799999999999999994
No 141
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=33.71 E-value=19 Score=41.36 Aligned_cols=20 Identities=20% Similarity=0.268 Sum_probs=17.3
Q ss_pred CccEEEEEcCccceEEEEEE
Q 002367 23 QSAVSSVDLGSEWLKVAVVN 42 (930)
Q Consensus 23 ~~~vvGIDfGTt~s~va~~~ 42 (930)
+..++|||+|||++++++++
T Consensus 6 ~~~~lgIDiGtts~k~~l~d 25 (508)
T 3ifr_A 6 GRQVIGLDIGTTSTIAILVR 25 (508)
T ss_dssp -CEEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEEecCcceEEEEEC
Confidence 35799999999999999994
No 142
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=33.45 E-value=64 Score=34.48 Aligned_cols=46 Identities=22% Similarity=0.216 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCC
Q 002367 345 DLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (930)
Q Consensus 345 ~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~ 393 (930)
-....+...|+++|+++++++++|++|+..|+++++ -+.+.+.||.
T Consensus 228 ~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~ 273 (339)
T 1mzj_A 228 WAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRLGV 273 (339)
T ss_dssp HHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHhCC
Confidence 345677888999999999999999999999988654 3567777874
No 143
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=33.11 E-value=2.2e+02 Score=26.11 Aligned_cols=29 Identities=17% Similarity=-0.046 Sum_probs=21.5
Q ss_pred CHHHHHHHHHHHHhccchHHHhHHhhhcc
Q 002367 727 TAKEFQERLDVLKAIGDPVFFRFKELTAR 755 (930)
Q Consensus 727 ~~~~~~~kl~~L~~~~~pi~~R~~e~~~r 755 (930)
+.+.+.+++..|......+..+..+...+
T Consensus 13 ~a~~I~~r~~~l~~r~~~L~~~a~~R~~~ 41 (149)
T 3f31_A 13 TAEDIQERRQQVLDRYHRFKELSTLRRQK 41 (149)
T ss_dssp CTTHHHHHHHHHHHHTCSCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55678888888888888887777665544
No 144
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=32.11 E-value=20 Score=40.89 Aligned_cols=17 Identities=12% Similarity=0.196 Sum_probs=16.0
Q ss_pred cEEEEEcCccceEEEEE
Q 002367 25 AVSSVDLGSEWLKVAVV 41 (930)
Q Consensus 25 ~vvGIDfGTt~s~va~~ 41 (930)
.++|||+|||+++++++
T Consensus 3 ~~lgiDiGtT~~k~~l~ 19 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILF 19 (495)
T ss_dssp CEEEEEECSSEEEEEEE
T ss_pred EEEEEeeCCcceEEEEE
Confidence 58999999999999998
No 145
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=32.04 E-value=68 Score=35.44 Aligned_cols=68 Identities=24% Similarity=0.345 Sum_probs=48.6
Q ss_pred cccEEEeeCCCCCHHHHHHHHHHHHHcCCCeeEEechhhH-HHHHhccccCCCC-----CCc---------------EEE
Q 002367 161 VKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSG-AALQYGIDKDFSN-----ESR---------------HVV 219 (930)
Q Consensus 161 ~~~~VItVPa~f~~~qR~al~~Aa~~AGl~~l~Li~EptA-AAl~y~~~~~~~~-----~~~---------------~vl 219 (930)
|..+|+..|+.-+ -.++-||+++|.+-+--+--.-| ||++||... .+. +|. ..+
T Consensus 154 V~~Iv~~tPp~i~----p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTet-Ip~VDkI~GPGN~yVa~AKr~Vs~~~G~V 228 (434)
T 1kae_A 154 CKKVVLCSPPPIA----DEILYAAQLCGVQDVFNVGGAQAIAALAFGTES-VPKVDKIFGPGNAFVTEAKRQVSQRLDGA 228 (434)
T ss_dssp CSEEEEEECSSCC----HHHHHHHHHTTCCEEEECCHHHHHHHHHHCCSS-SCCCSEEECCCCHHHHHHHHHHHHCTTSC
T ss_pred CCeEEEECCCCCC----HHHHHHHHHcCCCEEeecccHHHHHHHHcCCCC-CCCccEEECCCcHHHHHHHHHhHhhcCcc
Confidence 6689999998322 46889999999998888888888 799999763 111 111 123
Q ss_pred EEEcCCCceEEEEE
Q 002367 220 FYDMGATTTYAALV 233 (930)
Q Consensus 220 v~D~GggT~dvsvv 233 (930)
-+||=+|-+.+-|+
T Consensus 229 gIDm~AGPSEilVi 242 (434)
T 1kae_A 229 AIDMPAGPSEVLVI 242 (434)
T ss_dssp EESCCCCCCEEEEE
T ss_pred ccCCCCCCceEEEE
Confidence 47777777777776
No 146
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=31.74 E-value=72 Score=33.90 Aligned_cols=46 Identities=17% Similarity=0.193 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCC
Q 002367 345 DLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (930)
Q Consensus 345 ~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~ 393 (930)
-....+...++++|++++++++||++|++.+++.++ -+.+.+.||.
T Consensus 221 ~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~ 266 (331)
T 2x3e_A 221 QAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQLDL 266 (331)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCC
Confidence 345677788999999999999999999999998664 3567777874
No 147
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=31.38 E-value=54 Score=36.11 Aligned_cols=72 Identities=21% Similarity=0.230 Sum_probs=49.8
Q ss_pred cccEEEeeCCCCCHHHHHHHHHHHHHcCCCeeEEechhhH-HHHHhccccCCC----CCCc------------EEEEEEc
Q 002367 161 VKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSG-AALQYGIDKDFS----NESR------------HVVFYDM 223 (930)
Q Consensus 161 ~~~~VItVPa~f~~~qR~al~~Aa~~AGl~~l~Li~EptA-AAl~y~~~~~~~----~~~~------------~vlv~D~ 223 (930)
|..+|++.|+. ...---+++-||+++|.+-+--+--.-| ||++||...-.. -+|. ..+-+||
T Consensus 160 V~~Iv~~tPp~-~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g~VgIDm 238 (423)
T 4gic_A 160 VPELIMAVPAP-RGELNALVLAAAYISGVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFGQVGIDM 238 (423)
T ss_dssp CSEEEEECCCG-GGCCCHHHHHHHHHHTCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBTTBEECC
T ss_pred CCeEEEecCCC-CCCccHHHHHHHHhcCCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcCCcCccc
Confidence 56789999983 2222357899999999998888888877 789999864100 0111 1256788
Q ss_pred CCCceEEEEE
Q 002367 224 GATTTYAALV 233 (930)
Q Consensus 224 GggT~dvsvv 233 (930)
=+|-+.+.|+
T Consensus 239 ~AGPSEilVi 248 (423)
T 4gic_A 239 VAGPSEILVI 248 (423)
T ss_dssp CCCCCEEEEE
T ss_pred ccccceEEEE
Confidence 7887777777
No 148
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=31.28 E-value=21 Score=40.80 Aligned_cols=18 Identities=22% Similarity=0.261 Sum_probs=16.5
Q ss_pred cEEEEEcCccceEEEEEE
Q 002367 25 AVSSVDLGSEWLKVAVVN 42 (930)
Q Consensus 25 ~vvGIDfGTt~s~va~~~ 42 (930)
.++|||+|||++++++++
T Consensus 5 ~~lgIDiGtT~~k~~l~d 22 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYD 22 (503)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred EEEEEEeCCcceEEEEEC
Confidence 589999999999999993
No 149
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=30.57 E-value=25 Score=37.64 Aligned_cols=72 Identities=14% Similarity=0.097 Sum_probs=38.6
Q ss_pred ecHHHHHHHHHHHHHH----HHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCCCcc---CCCCCcchhh
Q 002367 334 ITRQKFEELCEDLWER----SLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTEL---DRHLDADEAI 406 (930)
Q Consensus 334 ItR~efe~l~~~~~~~----i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~~~i---~~~~n~deaV 406 (930)
++.++.+++.+.+.++ |.+-+.+++.+.++ ..|+.+||+ +++-..+.+.++...+ ..+.+.+-+-
T Consensus 243 ~~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~~-----~~vv~aG~G---~~L~~~la~~~~~~~~~~~i~~~~s~vap 314 (334)
T 3cet_A 243 ISEIDAENIAKNYYELWKELILENVENVAEKYGS-----KKVVITGLG---ENILKDALADFEVISVAERYGKDVSLATP 314 (334)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEESTT---HHHHHHHTTTSEEEEHHHHHCHHHHHSHH
T ss_pred cChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CeEEEeCCc---HHHHHHHHhhCCeeehhcccCcccccccC
Confidence 4666777766665554 44455555555433 378999987 4555555433211000 1011245566
Q ss_pred hcccHHH
Q 002367 407 VLGASLL 413 (930)
Q Consensus 407 a~GAa~~ 413 (930)
|.|+|+.
T Consensus 315 A~avA~l 321 (334)
T 3cet_A 315 SFAVAEL 321 (334)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7787755
No 150
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=30.44 E-value=2.6e+02 Score=23.98 Aligned_cols=88 Identities=13% Similarity=0.157 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHHhhc--------CCCCCHHHHHHHHHHHHhccchHHHhHHhhhcchHHHHHHHHHHHHHHHHHhcc
Q 002367 705 RQSFVEKLDEAQEWLYTD--------GEDATAKEFQERLDVLKAIGDPVFFRFKELTARPASVEHAQKYLGQLQQIVNDW 776 (930)
Q Consensus 705 r~~l~~~l~e~~~WL~~~--------g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~ai~~l~~~l~~~~~~~~~~ 776 (930)
...|...+++...||.+- .-..+...++..++..+.+..-|..+. .. +.........++.
T Consensus 4 L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~-------~~---v~~v~~~g~~L~~-- 71 (118)
T 3uul_A 4 LDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAHQ-------SS---VGSVLQAGNQLMT-- 71 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHH-------HH---HHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-------HH---HHHHHHHHHHHHH--
Confidence 467888899999999641 123456677777777776666654442 11 2222223333333
Q ss_pred ccCCCCCChhhhHHHHHhHHHHHHHHHHHHH
Q 002367 777 ETNKPWLPKDRTDEVLKDSETFKSWLDEKEN 807 (930)
Q Consensus 777 ~~~~~~it~~e~~~l~~~~~~~~~Wl~~~~~ 807 (930)
..|.+.++...|...++.+..-|+....
T Consensus 72 ---~~~~~~~~~~~i~~~l~~l~~rw~~L~~ 99 (118)
T 3uul_A 72 ---QGTLSDEEEFEIQEQMTLLNARWEALRV 99 (118)
T ss_dssp ---TTCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---hCCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 2356667777788888777776665544
No 151
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=30.43 E-value=52 Score=34.11 Aligned_cols=43 Identities=16% Similarity=0.167 Sum_probs=29.7
Q ss_pred cCCCeeEEechhhHHHHHhccccCCCCCCcEEEEEEcCCCceEEEEE
Q 002367 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (930)
Q Consensus 187 AGl~~l~Li~EptAAAl~y~~~~~~~~~~~~vlv~D~GggT~dvsvv 233 (930)
.|++ +.+.|+..|||++...... .... .++++-+|.| +-.+++
T Consensus 96 ~~~p-v~v~NDa~aaa~~e~~~g~-~~~~-~~v~l~~GtG-iG~gii 138 (289)
T 2aa4_A 96 TNLP-TIAINDAQAAAWAEFQALD-GDIT-DMVFITVSTG-VGGGVV 138 (289)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSC-TTCC-CEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechHHHHHHHHHHhCC-CCCc-eEEEEEeCcc-EEEEEE
Confidence 4776 4799999999987533221 1223 7889999988 566665
No 152
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=30.32 E-value=24 Score=40.34 Aligned_cols=18 Identities=17% Similarity=0.257 Sum_probs=16.7
Q ss_pred ccEEEEEcCccceEEEEE
Q 002367 24 SAVSSVDLGSEWLKVAVV 41 (930)
Q Consensus 24 ~~vvGIDfGTt~s~va~~ 41 (930)
..++|||+|||+++++++
T Consensus 6 ~~~lgIDiGtts~k~~l~ 23 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILF 23 (501)
T ss_dssp CEEEEEEECSSEEEEEEE
T ss_pred cEEEEEEeCccceEEEEE
Confidence 369999999999999999
No 153
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=30.24 E-value=24 Score=40.26 Aligned_cols=17 Identities=24% Similarity=0.268 Sum_probs=16.1
Q ss_pred cEEEEEcCccceEEEEE
Q 002367 25 AVSSVDLGSEWLKVAVV 41 (930)
Q Consensus 25 ~vvGIDfGTt~s~va~~ 41 (930)
.++|||+|||+++++++
T Consensus 4 ~~lgiDiGtt~~k~~l~ 20 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIF 20 (497)
T ss_dssp EEEEEEECSSEEEEEEE
T ss_pred EEEEEecCCchhEEEEE
Confidence 58999999999999998
No 154
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=30.12 E-value=1.1e+02 Score=34.36 Aligned_cols=49 Identities=6% Similarity=0.103 Sum_probs=29.3
Q ss_pred hhHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHHH
Q 002367 787 RTDEVLKDSETFKSWLDEKENDQKKTSGFSKPAFTSEEVYEKILKLQDKI 836 (930)
Q Consensus 787 e~~~l~~~~~~~~~Wl~~~~~~Q~~~~~~~dP~~~~~di~~k~~~l~~~~ 836 (930)
.+..+...+++...|++++...-....-. +....+.-+..|.+.|+..+
T Consensus 94 ~L~qFl~d~~ee~~Wi~EKe~~~~s~d~g-d~l~dv~~l~~khq~l~~EL 142 (450)
T 3r6n_A 94 QLQNIIQATSREIMWINDCEEEELLYDWS-DKNTNIAQKQEAFSIRMSQL 142 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCS-TTCCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccC-cChhhHHHHHHHHHHHHHHH
Confidence 36677788888999999987755544322 22223333455555555544
No 155
>3u0c_A Invasin IPAB, 62 kDa antigen; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.05A {Shigella flexneri} PDB: 3gz1_P
Probab=29.92 E-value=61 Score=30.48 Aligned_cols=82 Identities=13% Similarity=0.119 Sum_probs=52.6
Q ss_pred HHHHHHHHhccchHHHhHHhhhcchHHHHHHHHHHHHHHHHHhccccCCCCCChhhhHHHHHhHHHHHHHHHHHHHHhhc
Q 002367 732 QERLDVLKAIGDPVFFRFKELTARPASVEHAQKYLGQLQQIVNDWETNKPWLPKDRTDEVLKDSETFKSWLDEKENDQKK 811 (930)
Q Consensus 732 ~~kl~~L~~~~~pi~~R~~e~~~rp~ai~~l~~~l~~~~~~~~~~~~~~~~it~~e~~~l~~~~~~~~~Wl~~~~~~Q~~ 811 (930)
+.-+++-+...+-.+.-...+..-..++..+.+.++.++..+..+....|-+..--+.++.-.+.+-..--+..+-+|+.
T Consensus 99 qTaL~eAQ~AtD~y~~Ainny~~Ads~~~~lekKvn~aq~kLs~L~P~dP~Y~K~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (201)
T 3u0c_A 99 NTLLSETEGLTRDYEKQINKLKNADSKIKDLENKINQIQTRLSELDPESPEKKKLSREEIQLTIKKDAAVKDRTLIEQKT 178 (201)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccHHHHhhhhhccchhhhhhhHHhhh
Confidence 33333444444444445555566667788899999999999999988887776666666655555554445555556655
Q ss_pred CC
Q 002367 812 TS 813 (930)
Q Consensus 812 ~~ 813 (930)
+.
T Consensus 179 ~~ 180 (201)
T 3u0c_A 179 LS 180 (201)
T ss_dssp HH
T ss_pred hh
Confidence 43
No 156
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=29.51 E-value=1e+02 Score=26.69 Aligned_cols=25 Identities=20% Similarity=0.255 Sum_probs=16.5
Q ss_pred hhHHHHHhHHHHHHHHHHHHHHhhc
Q 002367 787 RTDEVLKDSETFKSWLDEKENDQKK 811 (930)
Q Consensus 787 e~~~l~~~~~~~~~Wl~~~~~~Q~~ 811 (930)
++..+.+.++++..||.++......
T Consensus 3 ~L~~f~~~l~el~~WL~e~e~~l~~ 27 (118)
T 3uul_A 3 DLDSYQIALEEVLTWLLSAEDTFQE 27 (118)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4566677777788888776554443
No 157
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=28.22 E-value=3e+02 Score=33.38 Aligned_cols=45 Identities=11% Similarity=0.147 Sum_probs=26.7
Q ss_pred HHHHHhHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHH
Q 002367 789 DEVLKDSETFKSWLDEKENDQKKTSGFSKPAFTSEEVYEKILKLQDK 835 (930)
Q Consensus 789 ~~l~~~~~~~~~Wl~~~~~~Q~~~~~~~dP~~~~~di~~k~~~l~~~ 835 (930)
..+...++++..|+.++...-...... .| -+..+...+++.+...
T Consensus 609 ~~F~~~a~~~~~Wi~e~e~~l~~~~~~-~~-~~le~~l~~~~~~~~e 653 (863)
T 1sjj_A 609 KQFGAQANVIGPWIQTKMEEIGRISIE-MH-GTLEDQLNHLRQYEKS 653 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCTTC-TT-TSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccC-CC-CCHHHHHHHHHHHHHH
Confidence 344567788899999988776553322 12 2344444555555554
No 158
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=27.90 E-value=36 Score=37.30 Aligned_cols=50 Identities=16% Similarity=0.130 Sum_probs=33.8
Q ss_pred CccEEEEEcCCCCcHH-HHHHHHHHhCCC---ccCCCCCcchhhhcccHHHHhh
Q 002367 367 EIYAVELIGGGTRVPK-LQAKLQEYLGRT---ELDRHLDADEAIVLGASLLAAN 416 (930)
Q Consensus 367 ~I~~ViLvGG~sriP~-V~~~l~~~fg~~---~i~~~~n~deaVa~GAa~~aa~ 416 (930)
+.+.|+|.||.+..+. +.+.|.+.+... .+......+.+.++||+..+..
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 348 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLRG 348 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHcC
Confidence 5678999999987543 777777777542 2322333446899999987653
No 159
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=27.80 E-value=26 Score=39.77 Aligned_cols=16 Identities=31% Similarity=0.517 Sum_probs=15.3
Q ss_pred EEEEEcCccceEEEEE
Q 002367 26 VSSVDLGSEWLKVAVV 41 (930)
Q Consensus 26 vvGIDfGTt~s~va~~ 41 (930)
++|||+|||+++++++
T Consensus 2 ~lgiDiGtt~~k~~l~ 17 (484)
T 2itm_A 2 YIGIDLGTSGVKVILL 17 (484)
T ss_dssp EEEEEECSSEEEEEEE
T ss_pred EEEEEecCcccEEEEE
Confidence 6999999999999998
No 160
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=27.58 E-value=45 Score=28.18 Aligned_cols=28 Identities=25% Similarity=0.419 Sum_probs=25.6
Q ss_pred EEEeeCCCCCHHHHHHHHHHHHHcCCCe
Q 002367 164 FVISVPPYFGQAERKGLMQAAELAGMNV 191 (930)
Q Consensus 164 ~VItVPa~f~~~qR~al~~Aa~~AGl~~ 191 (930)
-.++.|+.++..+|..+...|+..||.-
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 5889999999999999999999999853
No 161
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=26.83 E-value=92 Score=32.98 Aligned_cols=46 Identities=15% Similarity=0.031 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCC
Q 002367 345 DLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (930)
Q Consensus 345 ~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~ 393 (930)
.....+...++++|++++++++||+.|++.++++++ -+.+.+.||-
T Consensus 229 ~~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~---~~~~~~~lg~ 274 (335)
T 1u6e_A 229 WAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRI---NELLVKNLQL 274 (335)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHcCC
Confidence 345677888999999999999999999999998654 3456677764
No 162
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=26.60 E-value=31 Score=39.48 Aligned_cols=17 Identities=24% Similarity=0.286 Sum_probs=16.1
Q ss_pred cEEEEEcCccceEEEEE
Q 002367 25 AVSSVDLGSEWLKVAVV 41 (930)
Q Consensus 25 ~vvGIDfGTt~s~va~~ 41 (930)
.++|||+|||+++++++
T Consensus 3 ~~lgiDiGtts~k~~l~ 19 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVF 19 (504)
T ss_dssp EEEEEEECSSEEEEEEE
T ss_pred EEEEEecCCcceEEEEE
Confidence 58999999999999998
No 163
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=25.92 E-value=30 Score=36.22 Aligned_cols=69 Identities=12% Similarity=-0.069 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCc--HHHHHHHHHHhCCCccCCCCCcchhhhcccHHHHhh
Q 002367 341 ELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRV--PKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAAN 416 (930)
Q Consensus 341 ~l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sri--P~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~aa~ 416 (930)
..+..++++....+-..+ ...+ ..+...|+|.||-++. +.+++.+++... ++ ..+..+...||++++..
T Consensus 210 ~~A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~~~~~l~~~l~~~~~--~i---~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 210 PAVYSLVQNSFDDFLVRN-VLRY-NRPDLPLHFIGSVAFHYREVLSSVIKKRGL--TL---GSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHHH-TGGG-CCTTSCEEEESHHHHHTHHHHHHHHHHTTC--CE---EEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-hccc-CCCCceEEEECchHHhhHHHHHHHHHHcCC--ee---cccCcCHHHHHHHHHHh
Confidence 344556666666666666 2221 1145678999988765 667777665432 22 23557889999998864
No 164
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=25.29 E-value=3e+02 Score=26.10 Aligned_cols=47 Identities=13% Similarity=0.222 Sum_probs=26.5
Q ss_pred hHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHH
Q 002367 788 TDEVLKDSETFKSWLDEKENDQKKTSGFSKPAFTSEEVYEKILKLQDK 835 (930)
Q Consensus 788 ~~~l~~~~~~~~~Wl~~~~~~Q~~~~~~~dP~~~~~di~~k~~~l~~~ 835 (930)
...+...++.+..||......-... ...+.+-.+..+..+.+.++..
T Consensus 112 l~~F~~d~~~~~~Wl~~~e~~L~~~-~~g~sl~~ve~LlkkH~~fe~~ 158 (185)
T 3lbx_B 112 VCQFSRDASVAEAWLIAQEPYLASG-DFGHTVDSVEKLIKRHEAFEKS 158 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC-CCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHhHhhhccC-CCCCCHHHHHHHHHHHHHHHHH
Confidence 4456678889999999876655432 2222333444444555554443
No 165
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=25.11 E-value=1.4e+02 Score=31.77 Aligned_cols=48 Identities=15% Similarity=-0.021 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCC
Q 002367 343 CEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (930)
Q Consensus 343 ~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~ 393 (930)
++...+.+...|+++|++++++.+||+.+++..++.+ +-+.+.+.+|-
T Consensus 229 ~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~---i~~~~~~~lgl 276 (333)
T 4dfe_A 229 FKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIR---IMQSTCRKLGL 276 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHH---HHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHhCC
Confidence 3455677788899999999999999999999998854 45777777775
No 166
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=24.66 E-value=61 Score=35.56 Aligned_cols=46 Identities=20% Similarity=0.279 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCC
Q 002367 345 DLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (930)
Q Consensus 345 ~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~ 393 (930)
...+.+...|.++|+++|++.+||+.|++.+++.++ -+.+.+.+|-
T Consensus 284 ~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i---~d~~~~~lgl 329 (393)
T 1ted_A 284 YIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKI---IEQSVRSLGI 329 (393)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHH---HHHHHHHcCC
Confidence 445667788999999999999999999999988654 4567777764
No 167
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=24.09 E-value=8.7e+02 Score=29.13 Aligned_cols=23 Identities=4% Similarity=0.063 Sum_probs=16.0
Q ss_pred HHHHHHHhHHhHHHHHHhhccCc
Q 002367 671 RTAELKNNLEGYIYATKEKFETS 693 (930)
Q Consensus 671 ~~~eakN~LEs~iY~~r~~l~~~ 693 (930)
+-...-..+++.|.+....|.+.
T Consensus 374 ~F~~~~~~~~~Wl~~~e~~l~~~ 396 (863)
T 1sjj_A 374 KFRQKASIHESWTDGKEAMLQQK 396 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc
Confidence 33445567888888888888654
No 168
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=24.06 E-value=41 Score=34.90 Aligned_cols=17 Identities=18% Similarity=0.350 Sum_probs=15.9
Q ss_pred cEEEEEcCccceEEEEE
Q 002367 25 AVSSVDLGSEWLKVAVV 41 (930)
Q Consensus 25 ~vvGIDfGTt~s~va~~ 41 (930)
-+++||+|+|+++++++
T Consensus 3 MlL~IDIGNT~iK~gl~ 19 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVF 19 (266)
T ss_dssp CEEEEEECSSEEEEEEE
T ss_pred eEEEEEECCCeEEEEEE
Confidence 38999999999999999
No 169
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=24.05 E-value=7.7e+02 Score=27.32 Aligned_cols=130 Identities=11% Similarity=0.139 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHhhc---------CCC-CCHHHHHHHHHHHHhccchHHHhHHhhhcchHHH--------HHHHHHH
Q 002367 705 RQSFVEKLDEAQEWLYTD---------GED-ATAKEFQERLDVLKAIGDPVFFRFKELTARPASV--------EHAQKYL 766 (930)
Q Consensus 705 r~~l~~~l~e~~~WL~~~---------g~~-a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~ai--------~~l~~~l 766 (930)
.-.|...+.+.+.||.+- |.+ .+.....+|.+.|+.=...-..|+.....+.+.+ ..++..+
T Consensus 95 L~qFl~d~~ee~~Wi~EKe~~~~s~d~gd~l~dv~~l~~khq~l~~EL~~~e~~i~~v~~~G~~Li~~~Hpas~~I~~r~ 174 (450)
T 3r6n_A 95 LQNIIQATSREIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKIEAYM 174 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCCCSTTCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccCcChhhHHHHHHHHHHHHHHHHHchHHHHHHHHHHHHHHHcCCCCchHHHHHH
Confidence 456777788888888641 322 3455566666666644444444444433332222 2233333
Q ss_pred HHHHHHHhc----cccCCCCC-ChhhhHHHHHhHHHHHHHHHHHHHHhhcC--CCCCCCcccHHHHHHHHHHHHH
Q 002367 767 GQLQQIVND----WETNKPWL-PKDRTDEVLKDSETFKSWLDEKENDQKKT--SGFSKPAFTSEEVYEKILKLQD 834 (930)
Q Consensus 767 ~~~~~~~~~----~~~~~~~i-t~~e~~~l~~~~~~~~~Wl~~~~~~Q~~~--~~~~dP~~~~~di~~k~~~l~~ 834 (930)
..++..-.. +.....|+ ...+...+...++++++||.++...-... +-..+..-.+..+..|...++.
T Consensus 175 ~~L~~~W~~L~~l~~~R~~~L~~a~~~~QF~~Da~EaesWL~eke~~l~s~y~~D~g~d~~~~e~LLkkh~~le~ 249 (450)
T 3r6n_A 175 DTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKYPCDKNMPLQHLLEQIKELEKERE 249 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhcccccCcCCCCHHHHHHHHHHHHHHHH
Confidence 333221111 01111122 11235567778999999999876655443 1123333333444444444433
No 170
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=23.87 E-value=1.4e+02 Score=29.65 Aligned_cols=24 Identities=21% Similarity=0.382 Sum_probs=17.0
Q ss_pred hhHHHHHhHHHHHHHHHHHHHHhh
Q 002367 787 RTDEVLKDSETFKSWLDEKENDQK 810 (930)
Q Consensus 787 e~~~l~~~~~~~~~Wl~~~~~~Q~ 810 (930)
....+...+++...|++++...-.
T Consensus 121 ~l~~F~~~~~~~~~Wi~eke~~~~ 144 (224)
T 2iak_A 121 TLHNFVTRATNELIWLNEKEESEV 144 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455666777788888888777544
No 171
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=23.07 E-value=36 Score=35.89 Aligned_cols=64 Identities=17% Similarity=0.098 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCC--cHHHHHHHHHHhCCCccCCCCCcchhhhcccHHHHh
Q 002367 342 LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTR--VPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAA 415 (930)
Q Consensus 342 l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sr--iP~V~~~l~~~fg~~~i~~~~n~deaVa~GAa~~aa 415 (930)
.+..++++....+-..+...-. . +...|+|.||.+. .|.+.+.+.+.+ . .++.+.+.||+++|.
T Consensus 227 ~A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i-----~---~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 227 EADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL-----V---APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC-----C---CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc-----c---CCCCCHHHHHHHHHh
Confidence 4555666666666666655332 2 5567888888764 456666666543 1 145678899998865
No 172
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=22.31 E-value=1.4e+02 Score=25.83 Aligned_cols=24 Identities=25% Similarity=0.314 Sum_probs=16.0
Q ss_pred hhHHHHHhHHHHHHHHHHHHHHhh
Q 002367 787 RTDEVLKDSETFKSWLDEKENDQK 810 (930)
Q Consensus 787 e~~~l~~~~~~~~~Wl~~~~~~Q~ 810 (930)
++..+...++++..||.++.....
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l~ 26 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTLQ 26 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456677777788888876654433
No 173
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=21.76 E-value=1.7e+02 Score=31.25 Aligned_cols=50 Identities=10% Similarity=-0.004 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCC
Q 002367 341 ELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (930)
Q Consensus 341 ~l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~ 393 (930)
.+.+..+..+...++++|+++|++.+||+.+++..++.+ +.+.+.+.+|-
T Consensus 239 ~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~---i~~~~~~~lgl 288 (345)
T 3s21_A 239 LLLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRP---HTAAFVKSFGI 288 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHH---HHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHH---HHHHHHHHcCc
Confidence 344555667778889999999999999999999998855 45777777775
No 174
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=21.11 E-value=3.9e+02 Score=22.76 Aligned_cols=89 Identities=11% Similarity=0.143 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHhhc--------CCCCCHHHHHHHHHHHHhccchHHHhHHhhhcchHHHHHHHHHHHHHHHHHhc
Q 002367 704 ERQSFVEKLDEAQEWLYTD--------GEDATAKEFQERLDVLKAIGDPVFFRFKELTARPASVEHAQKYLGQLQQIVND 775 (930)
Q Consensus 704 er~~l~~~l~e~~~WL~~~--------g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~ai~~l~~~l~~~~~~~~~ 775 (930)
+...|...+++...||.+- .-..+...++..++..+.+..-|..+- . .+.........++.
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~-------~---~v~~~~~~g~~L~~- 71 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQ-------G---RVGNILQLGSKLIG- 71 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHHH-------H---HHHHHHHHHHHHHH-
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhH-------H---HHHHHHHHHHHHHH-
Confidence 4567888999999999641 122456666666666666655554432 1 11222222333332
Q ss_pred cccCCCCCChhhhHHHHHhHHHHHHHHHHHHH
Q 002367 776 WETNKPWLPKDRTDEVLKDSETFKSWLDEKEN 807 (930)
Q Consensus 776 ~~~~~~~it~~e~~~l~~~~~~~~~Wl~~~~~ 807 (930)
..|.+.++...|...++.+..-|+....
T Consensus 72 ----~~~~~~~~~~~i~~~l~~l~~rw~~L~~ 99 (119)
T 3uun_A 72 ----TGKLSEDEETEVQEQMNLLNSRWECLRV 99 (119)
T ss_dssp ----HTCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----cCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1345666677777777777766665444
No 175
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=20.77 E-value=6.8e+02 Score=25.67 Aligned_cols=24 Identities=4% Similarity=0.158 Sum_probs=18.8
Q ss_pred hHHHHHhHHHHHHHHHHHHHHhhc
Q 002367 788 TDEVLKDSETFKSWLDEKENDQKK 811 (930)
Q Consensus 788 ~~~l~~~~~~~~~Wl~~~~~~Q~~ 811 (930)
...+...++.+..|+.++...-..
T Consensus 221 ~~~F~~~~~~l~~Wl~~~~~~l~~ 244 (323)
T 3edv_A 221 KFRFFSMVRDLMLWMEDVIRQIEA 244 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 446778889999999998776654
No 176
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=20.74 E-value=57 Score=35.94 Aligned_cols=45 Identities=13% Similarity=0.242 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCc--HHHHHHHHHHhC
Q 002367 348 ERSLVPLREVLNYSGLKMDEIYAVELIGGGTRV--PKLQAKLQEYLG 392 (930)
Q Consensus 348 ~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sri--P~V~~~l~~~fg 392 (930)
......++++|+++++++++|+.|++.|.++.+ |.--..|.+.||
T Consensus 275 ~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~~g 321 (408)
T 1j3n_A 275 KGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFG 321 (408)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHhc
Confidence 345677899999999999999999999999875 333455566665
No 177
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=20.13 E-value=2.1e+02 Score=30.85 Aligned_cols=49 Identities=10% Similarity=0.017 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCccEEEEEcCCCCcHHHHHHHHHHhCC
Q 002367 342 LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (930)
Q Consensus 342 l~~~~~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~V~~~l~~~fg~ 393 (930)
+++-.+..+...|+++|+++|++.+||+.+++.-++.+ +.+.+.+.+|-
T Consensus 260 v~~~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~---i~~~~~~~Lgl 308 (365)
T 3gwa_A 260 VMAFSLAEVPRAADRLLALAGEPRENIDCFVLHQANRF---MLDALRKKMKI 308 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHH---HHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHhCC
Confidence 33445667788899999999999999999999887754 45777777765
Done!