AmiGO: BLAST Results


BLAST match view associations BLAST with AT3G21480 AT3G21480 AT3G21480	protein from Arabidopsis thaliana	1.3e-112
BLAST match view associations BLAST with AT4G03130 AT4G03130 AT4G03130	protein from Arabidopsis thaliana	2.0e-73
BLAST match view associations BLAST with paxip1 paxip1 paxip1 PAX interacting (with transcription-activation domain) protein 1	gene_product from Danio rerio	5.7e-20
BLAST match view associations BLAST with PAXIP1 PAXIP1 PAXIP1 PAX-interacting protein 1	protein from Bos taurus	3.0e-18
BLAST match view associations BLAST with PAXIP1 PAXIP1 PAXIP1 PAX-interacting protein 1	protein from Bos taurus	5.4e-18
BLAST match view associations BLAST with PAXIP1 PAXIP1 PAXIP1 PAX-interacting protein 1	protein from Homo sapiens	8.3e-18
BLAST match view associations BLAST with Paxip1 Paxip1 Paxip1 PAX interacting (with transcription-activation domain) protein 1	gene from Rattus norvegicus	8.4e-18
BLAST match view associations BLAST with Paxip1 Paxip1 Paxip1 PAX interacting (with transcription-activation domain) protein 1	protein from Mus musculus	7.4e-17
BLAST match view associations BLAST with im:7163673 im:7163673 im:7163673	gene_product from Danio rerio	3.7e-16
BLAST match view associations BLAST with Mdc1 Mdc1 Mdc1 mediator of DNA damage checkpoint 1	gene from Rattus norvegicus	8.1e-14
BLAST match view associations BLAST with Mdc1 Mdc1 Mdc1 Mediator of DNA damage checkpoint protein 1	protein from Rattus norvegicus	8.1e-14
BLAST match view associations BLAST with MDC1 MDC1 MDC1 Mediator of DNA damage checkpoint protein 1	protein from Sus scrofa	1.1e-13
BLAST match view associations BLAST with MDC1 MDC1 MDC1 Mediator of DNA damage checkpoint protein 1	protein from Sus scrofa	1.1e-13
BLAST match view associations BLAST with MDC1 MDC1 MDC1 Mediator of DNA damage checkpoint protein 1	protein from Homo sapiens	2.6e-13
BLAST match view associations BLAST with MDC1 MDC1 MDC1 Uncharacterized protein	protein from Bos taurus	2.9e-13
BLAST match view associations BLAST with MDC1 MDC1 MDC1 Mediator of DNA damage checkpoint protein 1	protein from Macaca mulatta	9.8e-13
BLAST match view associations BLAST with MDC1 MDC1 MDC1 Mediator of DNA damage checkpoint protein 1	protein from Pan troglodytes	1.2e-12
BLAST match view associations BLAST with Mdc1 Mdc1 Mdc1 mediator of DNA damage checkpoint 1	protein from Mus musculus	4.5e-12
BLAST match view associations BLAST with pis-1 pis-1 pis-1	gene from Caenorhabditis elegans	1.2e-11
BLAST match view associations BLAST with AT2G41450 AT2G41450 AT2G41450	protein from Arabidopsis thaliana	4.1e-10
BLAST match view associations BLAST with ptip ptip ptip	protein from Drosophila melanogaster	3.0e-06
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  002369
        (930 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2089960 - symbol:AT3G21480 "AT3G21480" species...   771  1.3e-112  4
TAIR|locus:2125442 - symbol:AT4G03130 "AT4G03130" species...   601  2.0e-73   2
ZFIN|ZDB-GENE-041010-214 - symbol:paxip1 "PAX interacting...   275  5.7e-20   1
UNIPROTKB|A0JNA8 - symbol:PAXIP1 "PAX-interacting protein...   271  3.0e-18   2
UNIPROTKB|G3MZP9 - symbol:PAXIP1 "PAX-interacting protein...   271  5.4e-18   2
UNIPROTKB|Q6ZW49 - symbol:PAXIP1 "PAX-interacting protein...   267  8.3e-18   2
RGD|1307547 - symbol:Paxip1 "PAX interacting (with transc...   268  8.4e-18   2
MGI|MGI:1890430 - symbol:Paxip1 "PAX interacting (with tr...   260  7.4e-17   2
ZFIN|ZDB-GENE-060810-185 - symbol:im:7163673 "im:7163673"...   255  3.7e-16   2
RGD|1559468 - symbol:Mdc1 "mediator of DNA damage checkpo...   230  8.1e-14   4
UNIPROTKB|Q5U2M8 - symbol:Mdc1 "Mediator of DNA damage ch...   230  8.1e-14   4
UNIPROTKB|F1RUB0 - symbol:MDC1 "Mediator of DNA damage ch...   246  1.1e-13   3
UNIPROTKB|Q767L8 - symbol:MDC1 "Mediator of DNA damage ch...   246  1.1e-13   3
UNIPROTKB|F8W1C2 - symbol:MDC1 "Mediator of DNA damage ch...   229  2.0e-13   2
UNIPROTKB|Q14676 - symbol:MDC1 "Mediator of DNA damage ch...   229  2.6e-13   4
UNIPROTKB|E1BI26 - symbol:MDC1 "Uncharacterized protein" ...   240  2.9e-13   3
UNIPROTKB|F1P482 - symbol:PAXIP1 "Uncharacterized protein...   215  9.8e-13   2
UNIPROTKB|Q5TM68 - symbol:MDC1 "Mediator of DNA damage ch...   227  9.8e-13   2
UNIPROTKB|Q7YR40 - symbol:MDC1 "Mediator of DNA damage ch...   228  1.2e-12   4
MGI|MGI:3525201 - symbol:Mdc1 "mediator of DNA damage che...   221  4.5e-12   4
WB|WBGene00004031 - symbol:pis-1 species:6239 "Caenorhabd...   207  1.2e-11   2
TAIR|locus:2060535 - symbol:AT2G41450 species:3702 "Arabi...   180  4.1e-10   1
POMBASE|SPBC582.05c - symbol:brc1 "BRCT domain protein Br...   165  3.0e-08   1
FB|FBgn0052133 - symbol:ptip species:7227 "Drosophila mel...   151  3.0e-06   1


>TAIR|locus:2089960 [details] [associations]
            symbol:AT3G21480 "AT3G21480" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005622
            "intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR001357
            Pfam:PF00533 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB019232
            SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 EMBL:AB243789
            IPI:IPI00534195 RefSeq:NP_188785.2 UniGene:At.38050
            ProteinModelPortal:Q9LVF7 SMR:Q9LVF7 STRING:Q9LVF7 PRIDE:Q9LVF7
            EnsemblPlants:AT3G21480.1 GeneID:821702 KEGG:ath:AT3G21480
            TAIR:At3g21480 eggNOG:NOG238614 HOGENOM:HOG000153141
            InParanoid:Q9LVF7 OMA:QTASRET PhylomeDB:Q9LVF7
            ProtClustDB:CLSN2920268 Genevestigator:Q9LVF7 Uniprot:Q9LVF7
        Length = 1041

 Score = 771 (276.5 bits), Expect = 1.3e-112, Sum P(4) = 1.3e-112
 Identities = 156/264 (59%), Positives = 189/264 (71%)

Query:   658 SPANCITPVNAASPVCMGNGYIKQSCRKNLAKSCLVKEINRLIATEPEPLSPLKDLRKRR 717
             +PA   TP    SP+CMG+ Y + SC+ +   S   +E   L     EP+S  K  RKRR
Sbjct:   754 TPAKSKTPSTNVSPICMGDEYHRLSCKDSFT-SHTTREFRSLTVPVAEPISETKSTRKRR 812

Query:   718 DMASIQVLFSHHLDEDIIKQQKKILDRLGASEVSSITDATHFVTDIFVRTRNMLEAIASG 777
             D+ SI VLFS HLDED+ K QKKIL R   SE SS+ +ATHF+ D F RTRNMLEAIASG
Sbjct:   813 DLGSICVLFSQHLDEDVTKHQKKILARFDISEASSMKEATHFIADNFTRTRNMLEAIASG 872

Query:   778 KPVVTHLWLESIAQVKIHIDEESYLLRDTKKEKEFGFSMPASLARARKHPLLKDQRVLIT 837
             KPVVT  WLESI QV I++DE+ Y+LRD+KKEKEF F+M  SLARAR+ PLL+ +RV IT
Sbjct:   873 KPVVTTQWLESIDQVNIYVDEDMYILRDSKKEKEFCFNMGVSLARARQFPLLQGRRVFIT 932

Query:   838 PNIKPSKETISSLIKSVHGQAVERLGRSAXXXXXXXXXXXILSCEEDYEICEPFLEKGAA 897
             PN KP+  TI++L+K+VHG  VERLGRS+           +LSCEED  IC PFLE+GA 
Sbjct:   933 PNTKPALNTITTLVKAVHGLPVERLGRSSLSEDKVPENLLVLSCEEDRAICIPFLERGAE 992

Query:   898 VYSSELLLNGMVTQKLEYERYYMF 921
             VYSSELLLNG+VTQ+LEYERY +F
Sbjct:   993 VYSSELLLNGIVTQRLEYERYRLF 1016

 Score = 269 (99.8 bits), Expect = 1.3e-112, Sum P(4) = 1.3e-112
 Identities = 68/164 (41%), Positives = 87/164 (53%)

Query:    60 RVGSSTVRKLFTEDSVSQDKGLPNNGDNAAGGENLLQFPVNDDELAGLSYVDSQEPGEFS 119
             R G  T RKLF ED        P         E       N D L  LSY+ SQEPGE S
Sbjct:   252 RTGKKTARKLFVED-------FPE--------EKFHSTDCNVD-LGNLSYIGSQEPGEES 295

Query:   120 EANALTFVEQFIEKNNF-VDFDHEVDLXXXXXXXXXPVSTAKGPQSLAKKSNDRSKAGKT 178
             +A+AL  V++ I +     DF+ + D           V   KGPQ LAKK + +S A   
Sbjct:   296 QASALNLVDKLISECRLEFDFEVQADYGRKTEDKSKFVQIFKGPQELAKKVSYKSGAVGN 355

Query:   179 GIYDWDDSREDEGGGDLFCRRKDEFFGTAYRAQRSLTEPRQLKK 222
              I+DWDD+REDEGGGD++ RRKDEFFG A + +   + PR+ K+
Sbjct:   356 NIFDWDDNREDEGGGDIYRRRKDEFFGVASKRREFSSLPREQKR 399

 Score = 78 (32.5 bits), Expect = 1.3e-112, Sum P(4) = 1.3e-112
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query:   268 EKNLLSELDERLNADSSRGQPDAAVGKTDVSQILNVGPDTQLAAEAMEALLSGEG 322
             +KNL+ E DE ++ +S+    D         +    GPDTQ+AAE M AL SG+G
Sbjct:   565 KKNLVDEFDE-VSQESNTEMFDR-------HEEAEAGPDTQMAAEVMNALHSGDG 611

 Score = 69 (29.3 bits), Expect = 4.1e-85, Sum P(3) = 4.1e-85
 Identities = 71/274 (25%), Positives = 105/274 (38%)

Query:    76 SQDKGLPNNGDNAAGGENLLQFPVNDDELAGLSYVDSQEPGEFSEANALT-FVEQFIEKN 134
             S  KG  +N    +G EN +    N   L  L +V+ ++     +  A   FVE F E+ 
Sbjct:   216 SSGKGTTHN----SGLENSVGEVGNQQSLTSL-FVEEKKDLRTGKKTARKLFVEDFPEEK 270

Query:   135 NFVDFDHEVDLXXXXXXXXXPVSTAKGPQSLAKKSNDRSKAGKTGIYDWDDSREDEGGGD 194
              F   D  VDL           S   G +S A   N   K       ++D   + + G  
Sbjct:   271 -FHSTDCNVDLGNLSYIG----SQEPGEESQASALNLVDKLISECRLEFDFEVQADYGRK 325

Query:   195 LFCRRK--DEFFGTAYRAQRSLTEPRQLKKRKFDLDGNGEQQDVHDGITMRSDSRVTFXX 252
                + K    F G    A++   +   +    FD D N E +   D    R D       
Sbjct:   326 TEDKSKFVQIFKGPQELAKKVSYKSGAVGNNIFDWDDNREDEGGGDIYRRRKDEFFGVAS 385

Query:   253 XXXXXXXXXXXQ---LI---VEKNLLSELDERLNADS---SRGQPDAA---VGKT--DVS 298
                        Q   LI   V+K   +  D +L   S   SR     A   +GK   +V 
Sbjct:   386 KRREFSSLPREQKRELIPVAVDKRW-ARSDSKLLKHSVTRSRKNIQGAKKNLGKELDEVR 444

Query:   299 QILNVGPDTQLAAEAMEALLSGE-GIANHDANCL 331
             +   +G DTQ+AAEA++ L SG+ G  + +A+CL
Sbjct:   445 EAAVLGNDTQVAAEAIDDLCSGDRGKFDGEASCL 478

 Score = 51 (23.0 bits), Expect = 7.2e-107, Sum P(3) = 7.2e-107
 Identities = 31/141 (21%), Positives = 57/141 (40%)

Query:   374 KRKSKSGTEISRCSPDNSVKNF----KNISEKCD--RELATLNKRRAKSMDEQNSTINGS 427
             KR ++S +++ + S   S KN     KN+ ++ D  RE A L      + +  +   +G 
Sbjct:   408 KRWARSDSKLLKHSVTRSRKNIQGAKKNLGKELDEVREAAVLGNDTQVAAEAIDDLCSGD 467

Query:   428 KN-MDRVSSGIIGQR----NEDG-SLESCQPKEFNRCLRTETQNADHSIKKQKIAKAPSA 481
             +   D  +S + G++     E G S      ++     R +  + D  +KK+    +PS 
Sbjct:   468 RGKFDGEASCLTGKKLSPEEERGFSPGGVVTRQSKGTKRIQAMSKDELLKKRMKKASPSP 527

Query:   482 STPIAFRTRSSKAVIQLKTTG 502
             +         S    QL   G
Sbjct:   528 AKACRTNIEGSSNGDQLNKEG 548

 Score = 44 (20.5 bits), Expect = 3.9e-106, Sum P(3) = 3.9e-106
 Identities = 18/83 (21%), Positives = 37/83 (44%)

Query:   376 KSKSGTEISRCSPDNSVKNFKNISEKCDRELATLNKRRAKSMDEQ------NSTINGS-K 428
             KS+     SR +  N V  F  +S++ + E+   ++      D Q      N+  +G  +
Sbjct:   553 KSRKVQTASRETKKNLVDEFDEVSQESNTEMFDRHEEAEAGPDTQMAAEVMNALHSGDGR 612

Query:   429 NMDRVSSGIIGQRNE-DGSLESC 450
              +D   + +IG++   +G +  C
Sbjct:   613 EIDPEPNNLIGKKLLLEGGISRC 635

 Score = 38 (18.4 bits), Expect = 1.3e-112, Sum P(4) = 1.3e-112
 Identities = 14/47 (29%), Positives = 22/47 (46%)

Query:   432 RVSSGIIGQRNEDGSLESCQPKEFN-RCLRTET--QNADHSIKKQKI 475
             R S  I G +  D  +ES +PK    R +  ++  +N D   K  K+
Sbjct:   640 RKSKRIKGIQAVDNDVESLKPKNKKARSILAKSFEKNMDRYSKNDKV 686


>TAIR|locus:2125442 [details] [associations]
            symbol:AT4G03130 "AT4G03130" species:3702 "Arabidopsis
            thaliana" [GO:0003713 "transcription coactivator activity"
            evidence=ISS] [GO:0005622 "intracellular" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM] InterPro:IPR001357 Pfam:PF00533
            EMBL:CP002687 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
            IPI:IPI00537922 RefSeq:NP_192222.4 UniGene:At.50690
            ProteinModelPortal:F4JI52 SMR:F4JI52 EnsemblPlants:AT4G03130.1
            GeneID:828068 KEGG:ath:AT4G03130 OMA:SADSTHF Uniprot:F4JI52
        Length = 766

 Score = 601 (216.6 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
 Identities = 140/304 (46%), Positives = 188/304 (61%)

Query:   617 PNHSDGKIVVDSQPSAENAEMNSRLDKSPREQCEALESPCTSPANCITPVNAASPVCMGN 676
             P  S G  +V  +  +E   ++S L  S     +A  S C S    +     ASP  + +
Sbjct:   459 PRRSWGASLVKDR--SETNTLSSSLRGSLSGTRQA--SSCQSGVIDLNVAYHASPRKIYD 514

Query:   677 GYIKQSCRKNLAKSCLVKEINRLIATEPEPLSPL--KDLRKRRDMASIQVLFSHHLDEDI 734
             G  +  C K+  +  L KE+   +   P  +     KDLRKRR++A ++VLFS +LD++ 
Sbjct:   515 GSHESPCNKDFPRLFLQKELTTSLGG-PGKIGDFVWKDLRKRRNLAHVRVLFSQNLDDET 573

Query:   735 IKQQKKILDRLGASEVSSITDATHFVTDIFVRTRNMLEAIASGKPVVTHLWLESIAQVKI 794
             +KQQKKI+ RLG S  SS  D+THF+ D F RTRNMLEAIA GK VVT +WLES AQ + 
Sbjct:   574 VKQQKKIMVRLGISPASSSADSTHFIADRFARTRNMLEAIALGKFVVTPIWLESCAQTRC 633

Query:   795 HIDEESYLLRDTKKEKEFGFSMPASLARARKHPLLKDQRVLITPNIKPSKETISSLIKSV 854
              IDE+SY+LRD KKEK+ GF +  SLARA++HPLLK  +V ITP+IKPS+  I+ L+K  
Sbjct:   634 LIDEKSYILRDIKKEKD-GFCLLTSLARAKQHPLLKGFKVCITPSIKPSRGMITDLVKMT 692

Query:   855 HGQAVERLGRSAXXXXXXXXXXXILSCEEDYEICEPFLEKGAAVYSSELLLNGMVTQKLE 914
              GQ VE     A           ILSC+ED + C PF+ +GA +++SELLLNG+V QKLE
Sbjct:   693 QGQVVEASEIIAAEDRNFPEDVLILSCKEDRDFCLPFVNQGAVIFTSELLLNGIVIQKLE 752

Query:   915 YERY 918
             Y R+
Sbjct:   753 YARF 756

 Score = 159 (61.0 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
 Identities = 66/240 (27%), Positives = 104/240 (43%)

Query:    83 NNGDNAAGGENLLQFPVNDDELAGLSYVDSQEPGEFSEANALTFVEQFI-EKN-NFVDFD 140
             +N D   G +  L+   +     GL ++DSQEPGE ++A+AL FV+ F+ +K+ N    D
Sbjct:   133 SNCDTVTGFQGSLRITASSHG-PGLDFLDSQEPGESTQADALGFVDHFLMDKDLNLSPVD 191

Query:   141 HEVDLXXXXXXXXXPVSTAKGPQSLAKKSNDRSKAGKTGIYDWDDSREDEGGGDLFCRRK 200
               V+          PVS AKG QSLAK+   RS   K  ++DW   +         C   
Sbjct:   192 LPVN---SCRRKSSPVSGAKGCQSLAKRIMSRSPTRKMSVFDWSSDQ---------CDVS 239

Query:   201 DEFFGTAYRAQRSLTEPRQLKKRKFDLDGNGEQQDVHD--GITMRSDSRVTFXXXXXXXX 258
             D       RA  + ++ R+ +    D       +D  D   ++     RV          
Sbjct:   240 DPKTSPVTRASITCSKIREDQVAGDDFGVKKRSRDPCDIRKVSSHPTQRVMKNSSAKHLK 299

Query:   259 XXXXXQLIVEKNLLSELDERLNADSSRGQPDAAVGKTDVSQILNVGPDTQLAAEAMEALL 318
                   L      +S+ D +L  D +  +P     + D    +++G +TQ+AAEAM AL+
Sbjct:   300 MEQASGLSEGIMFISQKDAQLE-DKAPKEP--LEPEED---FIDIGINTQIAAEAMSALV 353

 Score = 49 (22.3 bits), Expect = 7.8e-62, Sum P(2) = 7.8e-62
 Identities = 27/94 (28%), Positives = 40/94 (42%)

Query:   389 DNSVKNFKNISEKCD-RELATLNKRRAKSMDEQNSTINGSKNMDRVSSGIIGQRNEDGSL 447
             D  VK  K   + CD R++++   +R   M   ++     +    +S GI+    +D  L
Sbjct:   265 DFGVK--KRSRDPCDIRKVSSHPTQRV--MKNSSAKHLKMEQASGLSEGIMFISQKDAQL 320

Query:   448 ESCQPKEFNRCLRTETQNADHSIKKQKIAKAPSA 481
             E   PKE    L  E    D  I  Q  A+A SA
Sbjct:   321 EDKAPKE---PLEPEEDFIDIGINTQIAAEAMSA 351

 Score = 41 (19.5 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query:   825 KHPLLKDQRVLITPNIKPSKETISSLIK 852
             +HP  K  R++   ++ P +   +SL+K
Sbjct:   442 RHPRAKRSRLMQRHHVPPRRSWGASLVK 469


>ZFIN|ZDB-GENE-041010-214 [details] [associations]
            symbol:paxip1 "PAX interacting (with
            transcription-activation domain) protein 1" species:7955 "Danio
            rerio" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006281 "DNA
            repair" evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
            evidence=IEA] InterPro:IPR001357 Pfam:PF00533
            ZFIN:ZDB-GENE-041010-214 SMART:SM00292 SUPFAM:SSF52113
            PROSITE:PS50172 GeneTree:ENSGT00600000084454 EMBL:CR855328
            IPI:IPI00489284 Ensembl:ENSDART00000144672 ArrayExpress:F1Q5Z1
            Bgee:F1Q5Z1 Uniprot:F1Q5Z1
        Length = 1122

 Score = 275 (101.9 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 72/201 (35%), Positives = 103/201 (51%)

Query:   724 VLFSHHLDEDIIKQQ--KKILDRLGASEVSSITDATHFVTDIFVRTRNMLEAIASGKPVV 781
             VLF+    E +  QQ  KK+ D LG     S    TH V +   RT   L AI+  K +V
Sbjct:   922 VLFTGF--EPLQAQQYIKKLYD-LGGEVADSTQKCTHLVANKVTRTVKFLTAISVVKHIV 978

Query:   782 THLWLESIAQVKIHIDEESYLLRDTKKEKEFGFSMPASLARARKHPLLKDQRVLITPNIK 841
             T  WLE   + +  +DE+SY+LRD + E  F FS+  SL RA   PL K +   ITP I 
Sbjct:   979 TPEWLEESWKSQKFVDEQSYMLRDAEAEVLFSFSLEESLKRAHAAPLFKGKYFYITPGIC 1038

Query:   842 PSKETISSLIKSVHGQAVERLG--RSAXXXXXXXXXXXIL--SCEEDYEICEPFLEKGAA 897
             PS  T+  +++S  G+ + +    R             I+  +CE D  +C  +  K   
Sbjct:  1039 PSLSTMKLIVESAAGKVLSKQPSYRKIMEHKQNKNLPEIILITCENDSHLCREYFLKNIE 1098

Query:   898 VYSSELLLNGMVTQKLEYERY 918
             VY++EL+L G++TQ L+YE Y
Sbjct:  1099 VYTAELILTGVLTQSLDYESY 1119


>UNIPROTKB|A0JNA8 [details] [associations]
            symbol:PAXIP1 "PAX-interacting protein 1" species:9913 "Bos
            taurus" [GO:0016363 "nuclear matrix" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
            repair" evidence=IEA] InterPro:IPR001357 Pfam:PF00533 GO:GO:0006355
            GO:GO:0006281 GO:GO:0006351 GO:GO:0006310 GO:GO:0016363
            SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 eggNOG:NOG310206
            KO:K14972 EMBL:BC126589 IPI:IPI00711253 RefSeq:NP_001071385.1
            UniGene:Bt.21228 ProteinModelPortal:A0JNA8 STRING:A0JNA8
            PRIDE:A0JNA8 GeneID:513213 KEGG:bta:513213 CTD:22976
            HOGENOM:HOG000115463 HOVERGEN:HBG061191 InParanoid:A0JNA8
            OrthoDB:EOG4CRKZF NextBio:20870752 ArrayExpress:A0JNA8
            Uniprot:A0JNA8
        Length = 984

 Score = 271 (100.5 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
 Identities = 64/188 (34%), Positives = 95/188 (50%)

Query:   735 IKQQKKILDRLGASEVSSITDATHFVTDIFVRTRNMLEAIASGKPVVTHLWLESIAQVKI 794
             ++Q  K L  LG     S    TH +     RT   L AI+  K +VT  WLE   + + 
Sbjct:   794 VQQYIKKLYILGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFKCQK 853

Query:   795 HIDEESYLLRDTKKEKEFGFSMPASLARARKHPLLKDQRVLITPNIKPSKETISSLIKSV 854
              +DE++YLLRD + E  F FS+  SL RA   PL K +   ITP I PS  T+ ++++  
Sbjct:   854 FVDEQNYLLRDAEAEVLFSFSLEESLRRAHASPLFKAKYFYITPGICPSLSTMKAIVECA 913

Query:   855 HGQAVERLG--RSAXXXXXXXXXXXI--LSCEEDYEICEPFLEKGAAVYSSELLLNGMVT 910
              G+ + R    R             I  +SCE D  +C  +  +G  V+++E +L G++T
Sbjct:   914 GGKVLSRQPSFRKLMEHKQNKSLSEIVLISCENDLHLCREYFARGIDVHNAEFVLTGVLT 973

Query:   911 QKLEYERY 918
             Q L+YE Y
Sbjct:   974 QTLDYESY 981

 Score = 38 (18.4 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query:   604 VKVKSKDFKGSKTPNHSDGKIVVDSQPSAENAEM 637
             +KV S+   G + P       V + QPS++ A +
Sbjct:   733 LKVSSELLMGVRLPPKPKQNEVTNVQPSSKRARI 766


>UNIPROTKB|G3MZP9 [details] [associations]
            symbol:PAXIP1 "PAX-interacting protein 1" species:9913 "Bos
            taurus" [GO:0060717 "chorion development" evidence=IEA] [GO:0060612
            "adipose tissue development" evidence=IEA] [GO:0060261 "positive
            regulation of transcription initiation from RNA polymerase II
            promoter" evidence=IEA] [GO:0051571 "positive regulation of histone
            H3-K4 methylation" evidence=IEA] [GO:0051568 "histone H3-K4
            methylation" evidence=IEA] [GO:0045830 "positive regulation of
            isotype switching" evidence=IEA] [GO:0043542 "endothelial cell
            migration" evidence=IEA] [GO:0035097 "histone methyltransferase
            complex" evidence=IEA] [GO:0035066 "positive regulation of histone
            acetylation" evidence=IEA] [GO:0031398 "positive regulation of
            protein ubiquitination" evidence=IEA] [GO:0030330 "DNA damage
            response, signal transduction by p53 class mediator" evidence=IEA]
            [GO:0010212 "response to ionizing radiation" evidence=IEA]
            [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000416 "positive
            regulation of histone H3-K36 methylation" evidence=IEA]
            InterPro:IPR001357 Pfam:PF00533 GO:GO:0060612 GO:GO:0010212
            GO:GO:0035066 GO:GO:0001570 GO:GO:0031398 SMART:SM00292
            SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0051568 GO:GO:0030330
            GO:GO:0051571 GO:GO:0043542 GO:GO:0035097 GO:GO:0060261 OMA:DIQQINR
            GO:GO:0060717 GO:GO:0000416 GO:GO:0045830
            GeneTree:ENSGT00600000084454 EMBL:DAAA02012116
            Ensembl:ENSBTAT00000064484 Uniprot:G3MZP9
        Length = 1195

 Score = 271 (100.5 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
 Identities = 64/188 (34%), Positives = 95/188 (50%)

Query:   735 IKQQKKILDRLGASEVSSITDATHFVTDIFVRTRNMLEAIASGKPVVTHLWLESIAQVKI 794
             ++Q  K L  LG     S    TH +     RT   L AI+  K +VT  WLE   + + 
Sbjct:  1005 VQQYIKKLYILGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFKCQK 1064

Query:   795 HIDEESYLLRDTKKEKEFGFSMPASLARARKHPLLKDQRVLITPNIKPSKETISSLIKSV 854
              +DE++YLLRD + E  F FS+  SL RA   PL K +   ITP I PS  T+ ++++  
Sbjct:  1065 FVDEQNYLLRDAEAEVLFSFSLEESLRRAHASPLFKAKYFYITPGICPSLSTMKAIVECA 1124

Query:   855 HGQAVERLG--RSAXXXXXXXXXXXI--LSCEEDYEICEPFLEKGAAVYSSELLLNGMVT 910
              G+ + R    R             I  +SCE D  +C  +  +G  V+++E +L G++T
Sbjct:  1125 GGKVLSRQPSFRKLMEHKQNKSLSEIVLISCENDLHLCREYFARGIDVHNAEFVLTGVLT 1184

Query:   911 QKLEYERY 918
             Q L+YE Y
Sbjct:  1185 QTLDYESY 1192

 Score = 38 (18.4 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query:   604 VKVKSKDFKGSKTPNHSDGKIVVDSQPSAENAEM 637
             +KV S+   G + P       V + QPS++ A +
Sbjct:   944 LKVSSELLMGVRLPPKPKQNEVTNVQPSSKRARI 977


>UNIPROTKB|Q6ZW49 [details] [associations]
            symbol:PAXIP1 "PAX-interacting protein 1" species:9606
            "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
            "DNA recombination" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0001570 "vasculogenesis"
            evidence=IEA] [GO:0043542 "endothelial cell migration"
            evidence=IEA] [GO:0060612 "adipose tissue development"
            evidence=IEA] [GO:0060717 "chorion development" evidence=IEA]
            [GO:0016363 "nuclear matrix" evidence=IEA] [GO:0010212 "response to
            ionizing radiation" evidence=IDA] [GO:0030330 "DNA damage response,
            signal transduction by p53 class mediator" evidence=IMP]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0000416 "positive
            regulation of histone H3-K36 methylation" evidence=ISS] [GO:0031398
            "positive regulation of protein ubiquitination" evidence=ISS]
            [GO:0035066 "positive regulation of histone acetylation"
            evidence=ISS] [GO:0045830 "positive regulation of isotype
            switching" evidence=ISS] [GO:0051571 "positive regulation of
            histone H3-K4 methylation" evidence=ISS] [GO:0060261 "positive
            regulation of transcription initiation from RNA polymerase II
            promoter" evidence=ISS;IMP] [GO:0035097 "histone methyltransferase
            complex" evidence=IDA] [GO:0051568 "histone H3-K4 methylation"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR001357 Pfam:PF00533 GO:GO:0006281 GO:GO:0060612
            GO:GO:0006351 GO:GO:0010212 GO:GO:0006310 GO:GO:0035066
            GO:GO:0001570 GO:GO:0031398 GO:GO:0016363 SMART:SM00292
            SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0051568 GO:GO:0030330
            eggNOG:NOG310206 GO:GO:0051571 GO:GO:0043542 GO:GO:0035097
            GO:GO:0060261 PDB:3SQD PDBsum:3SQD KO:K14972 CTD:22976
            HOVERGEN:HBG061191 EMBL:AK123044 EMBL:AK123600 EMBL:AK307417
            EMBL:BX538201 EMBL:BX640616 EMBL:AC093726 EMBL:U80735 EMBL:BC008328
            EMBL:BC033781 IPI:IPI00182798 IPI:IPI00479772 IPI:IPI00854696
            IPI:IPI00894296 IPI:IPI00973545 RefSeq:NP_031375.3
            UniGene:Hs.443881 ProteinModelPortal:Q6ZW49 SMR:Q6ZW49
            DIP:DIP-41786N IntAct:Q6ZW49 MINT:MINT-276076 STRING:Q6ZW49
            PhosphoSite:Q6ZW49 DMDM:74723057 PRIDE:Q6ZW49
            Ensembl:ENST00000397192 Ensembl:ENST00000404141 GeneID:22976
            KEGG:hsa:22976 UCSC:uc003wlr.1 UCSC:uc022aqf.1 UCSC:uc022aqh.1
            GeneCards:GC07M154735 H-InvDB:HIX0007243 HGNC:HGNC:8624
            HPA:HPA006694 MIM:608254 neXtProt:NX_Q6ZW49 PharmGKB:PA32964
            OMA:DIQQINR ChiTaRS:PAXIP1 GenomeRNAi:22976 NextBio:43785
            ArrayExpress:Q6ZW49 Bgee:Q6ZW49 CleanEx:HS_PAXIP1
            Genevestigator:Q6ZW49 GO:GO:0060717 GO:GO:0000416 GO:GO:0045830
            Uniprot:Q6ZW49
        Length = 1069

 Score = 267 (99.0 bits), Expect = 8.3e-18, Sum P(2) = 8.3e-18
 Identities = 63/188 (33%), Positives = 95/188 (50%)

Query:   735 IKQQKKILDRLGASEVSSITDATHFVTDIFVRTRNMLEAIASGKPVVTHLWLESIAQVKI 794
             ++Q  K L  LG     S    TH +     RT   L AI+  K +VT  WLE   + + 
Sbjct:   879 VQQYIKKLYILGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFRCQK 938

Query:   795 HIDEESYLLRDTKKEKEFGFSMPASLARARKHPLLKDQRVLITPNIKPSKETISSLIKSV 854
              IDE++Y+LRD + E  F FS+  SL RA   PL K +   ITP I PS  T+ ++++  
Sbjct:   939 FIDEQNYILRDAEAEVLFSFSLEESLKRAHVSPLFKAKYFYITPGICPSLSTMKAIVECA 998

Query:   855 HGQAVERLG--RSAXXXXXXXXXXXIL--SCEEDYEICEPFLEKGAAVYSSELLLNGMVT 910
              G+ + +    R             I+  SCE D  +C  +  +G  V+++E +L G++T
Sbjct:   999 GGKVLSKQPSFRKLMEHKQNSSLSEIILISCENDLHLCREYFARGIDVHNAEFVLTGVLT 1058

Query:   911 QKLEYERY 918
             Q L+YE Y
Sbjct:  1059 QTLDYESY 1066

 Score = 39 (18.8 bits), Expect = 8.3e-18, Sum P(2) = 8.3e-18
 Identities = 14/63 (22%), Positives = 22/63 (34%)

Query:   128 EQFIEKNNFVDFDHEVDLXXXXXXXXXPVSTAKGPQSLAKKSNDRSKAGKTGIYDWDDSR 187
             E+ +E N   D  +E               +  G Q  + KSN     G+    D  DS 
Sbjct:   198 EEEVE-NEEQDSQNEGSTDEKSSPASSQEGSPSGDQQFSPKSNTEKSKGELMFDDSSDSS 256

Query:   188 EDE 190
              ++
Sbjct:   257 PEK 259


>RGD|1307547 [details] [associations]
            symbol:Paxip1 "PAX interacting (with transcription-activation
            domain) protein 1" species:10116 "Rattus norvegicus" [GO:0000416
            "positive regulation of histone H3-K36 methylation" evidence=ISO]
            [GO:0001570 "vasculogenesis" evidence=ISO] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0006974 "response to DNA damage stimulus"
            evidence=ISO] [GO:0010212 "response to ionizing radiation"
            evidence=ISO] [GO:0030330 "DNA damage response, signal transduction
            by p53 class mediator" evidence=ISO] [GO:0031398 "positive
            regulation of protein ubiquitination" evidence=ISO] [GO:0035066
            "positive regulation of histone acetylation" evidence=ISO]
            [GO:0035097 "histone methyltransferase complex" evidence=ISO]
            [GO:0043542 "endothelial cell migration" evidence=ISO] [GO:0045830
            "positive regulation of isotype switching" evidence=ISO]
            [GO:0051568 "histone H3-K4 methylation" evidence=ISO] [GO:0051571
            "positive regulation of histone H3-K4 methylation" evidence=ISO]
            [GO:0060261 "positive regulation of transcription initiation from
            RNA polymerase II promoter" evidence=ISO] [GO:0060612 "adipose
            tissue development" evidence=ISO] [GO:0060717 "chorion development"
            evidence=ISO] InterPro:IPR001357 Pfam:PF00533 RGD:1307547
            GO:GO:0060612 GO:GO:0010212 GO:GO:0035066 GO:GO:0001570
            GO:GO:0031398 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
            GO:GO:0051568 GO:GO:0030330 GO:GO:0051571 GO:GO:0043542
            GO:GO:0035097 GO:GO:0060261 GO:GO:0060717 GO:GO:0000416
            GO:GO:0045830 IPI:IPI00949383 Ensembl:ENSRNOT00000066753
            ArrayExpress:F1LVY0 Uniprot:F1LVY0
        Length = 994

 Score = 268 (99.4 bits), Expect = 8.4e-18, Sum P(2) = 8.4e-18
 Identities = 72/231 (31%), Positives = 114/231 (49%)

Query:   697 NRLIATEPEPLSPLKDL----RKRRDMASIQVLFSHHLDEDI-IKQQKKILDRLGASEVS 751
             N +   +P   + ++DL    +K     +  VLF+    E + ++Q  K L  LG     
Sbjct:   763 NEVANIQPSKRARIEDLPPPTKKLTPELTPYVLFTGF--EPVQVQQYIKKLYILGGEVAE 820

Query:   752 SITDATHFVTDIFVRTRNMLEAIASGKPVVTHLWLESIAQVKIHIDEESYLLRDTKKEKE 811
             S    TH +     RT   L AI+  K +VT  WLE   + ++ IDE++Y+LRD + E  
Sbjct:   821 STKKCTHLIASKVTRTVKFLTAISVVKHIVTPDWLEECFKRQMFIDEQNYILRDAEAEVL 880

Query:   812 FGFSMPASLARARKHPLLKDQRVLITPNIKPSKETISSLIKSVHGQAVERLG--RSAXXX 869
             F FS+  SL RA   PL K +   ITP I PS  T+ ++++   G+ + +    R     
Sbjct:   881 FSFSLEESLKRAHVSPLFKTKYFYITPGICPSLATMKAIVECAGGKVLAKQPSFRKLMEH 940

Query:   870 XXXXXXXXIL--SCEEDYEICEPFLEKGAAVYSSELLLNGMVTQKLEYERY 918
                     I+  SCE D  +C  +  +G  V+++E +L G++TQ L+YE Y
Sbjct:   941 KQNKSLSEIILISCENDLHLCREYFARGIDVHNAEFVLTGVLTQTLDYESY 991

 Score = 37 (18.1 bits), Expect = 8.4e-18, Sum P(2) = 8.4e-18
 Identities = 10/24 (41%), Positives = 12/24 (50%)

Query:   682 SCRKNLAKSCLVKEINRLIATEPE 705
             SC+ NL K C       LI  EP+
Sbjct:    65 SCQLNLNKKC-----THLIVPEPK 83


>MGI|MGI:1890430 [details] [associations]
            symbol:Paxip1 "PAX interacting (with
            transcription-activation domain) protein 1" species:10090 "Mus
            musculus" [GO:0000416 "positive regulation of histone H3-K36
            methylation" evidence=IMP] [GO:0001570 "vasculogenesis"
            evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
            evidence=IDA] [GO:0010212 "response to ionizing radiation"
            evidence=ISO] [GO:0030330 "DNA damage response, signal transduction
            by p53 class mediator" evidence=ISO] [GO:0031398 "positive
            regulation of protein ubiquitination" evidence=IMP] [GO:0035066
            "positive regulation of histone acetylation" evidence=IMP]
            [GO:0035097 "histone methyltransferase complex" evidence=ISO;IDA]
            [GO:0043542 "endothelial cell migration" evidence=IMP] [GO:0045830
            "positive regulation of isotype switching" evidence=IMP]
            [GO:0051568 "histone H3-K4 methylation" evidence=ISO] [GO:0051571
            "positive regulation of histone H3-K4 methylation" evidence=IMP]
            [GO:0060261 "positive regulation of transcription initiation from
            RNA polymerase II promoter" evidence=ISO;IMP] [GO:0060612 "adipose
            tissue development" evidence=IMP] [GO:0060717 "chorion development"
            evidence=IMP] InterPro:IPR001357 MGI:MGI:1890430 Pfam:PF00533
            GO:GO:0006281 GO:GO:0060612 GO:GO:0006351 GO:GO:0006974
            GO:GO:0010212 GO:GO:0006310 GO:GO:0035066 GO:GO:0001570
            GO:GO:0031398 GO:GO:0016363 SMART:SM00292 SUPFAM:SSF52113
            PROSITE:PS50172 GO:GO:0051568 GO:GO:0030330 eggNOG:NOG310206
            GO:GO:0051571 GO:GO:0043542 GO:GO:0035097 GO:GO:0060261 KO:K14972
            CTD:22976 HOGENOM:HOG000115463 HOVERGEN:HBG061191 OrthoDB:EOG4CRKZF
            OMA:DIQQINR ChiTaRS:PAXIP1 GO:GO:0060717 GO:GO:0000416
            GO:GO:0045830 EMBL:AF104261 EMBL:AK144606 EMBL:BC066014
            IPI:IPI00421197 RefSeq:NP_061366.2 UniGene:Mm.277190
            UniGene:Mm.409895 HSSP:Q14676 ProteinModelPortal:Q6NZQ4 SMR:Q6NZQ4
            IntAct:Q6NZQ4 STRING:Q6NZQ4 PhosphoSite:Q6NZQ4 PaxDb:Q6NZQ4
            PRIDE:Q6NZQ4 Ensembl:ENSMUST00000002291 GeneID:55982 KEGG:mmu:55982
            UCSC:uc008wtr.1 GeneTree:ENSGT00600000084454 InParanoid:Q6NZQ4
            NextBio:311686 Bgee:Q6NZQ4 Genevestigator:Q6NZQ4 Uniprot:Q6NZQ4
        Length = 1056

 Score = 260 (96.6 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
 Identities = 65/189 (34%), Positives = 98/189 (51%)

Query:   735 IKQQKKILDRLGASEVSSITD-ATHFVTDIFVRTRNMLEAIASGKPVVTHLWLESIAQVK 793
             ++Q  K L  LG  EV+  T   TH +     RT   L AI+  K +VT  WLE   + +
Sbjct:   866 VQQYIKKLYILGG-EVAECTKKCTHLIASKVTRTVKFLTAISVVKHIVTPDWLEECFKRQ 924

Query:   794 IHIDEESYLLRDTKKEKEFGFSMPASLARARKHPLLKDQRVLITPNIKPSKETISSLIKS 853
               IDE++Y+LRD + E  F FS+  SL RA   PL K +   ITP I PS  T+ ++++ 
Sbjct:   925 TFIDEQNYILRDAEAEVLFSFSLEESLKRAHVSPLFKTKYFYITPGICPSLATMKAIVEC 984

Query:   854 VHGQAVERLG--RSAXXXXXXXXXXXIL--SCEEDYEICEPFLEKGAAVYSSELLLNGMV 909
               G+ + +    R             I+  SCE D  +C  +  +G  V+++E +L G++
Sbjct:   985 AGGKVLAKQPSFRKLMEHKQNKSLSEIILISCENDLHLCREYFARGIDVHNAEFVLTGVL 1044

Query:   910 TQKLEYERY 918
             TQ L+YE Y
Sbjct:  1045 TQTLDYESY 1053

 Score = 37 (18.1 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
 Identities = 10/24 (41%), Positives = 12/24 (50%)

Query:   682 SCRKNLAKSCLVKEINRLIATEPE 705
             SC+ NL K C       LI  EP+
Sbjct:   127 SCQLNLNKKC-----THLIVPEPK 145


>ZFIN|ZDB-GENE-060810-185 [details] [associations]
            symbol:im:7163673 "im:7163673" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000253
            InterPro:IPR008984 InterPro:IPR017956 Pfam:PF00498 PROSITE:PS50006
            SMART:SM00240 SMART:SM00384 InterPro:IPR001357 Pfam:PF00533
            ZFIN:ZDB-GENE-060810-185 GO:GO:0003677 Gene3D:2.60.200.20
            SUPFAM:SSF49879 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
            GeneTree:ENSGT00600000084454 EMBL:CABZ01064955 EMBL:CU984574
            EMBL:FP016064 IPI:IPI00481932 Ensembl:ENSDART00000121966
            Bgee:E7FA74 Uniprot:E7FA74
        Length = 1914

 Score = 255 (94.8 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
 Identities = 67/219 (30%), Positives = 110/219 (50%)

Query:   702 TEPEPLSPLKDLRKRRDMASI--QVLFSHHLDEDIIKQQKKILDRLGASEVSSITDATHF 759
             T  E LSP      RR +AS   +VLF+   DE      ++++ RLG +    + D TH 
Sbjct:  1682 TAEEALSPTPKT-PRRSLASQAHKVLFTGLTDES----GERVVSRLGGTLAKGVNDMTHL 1736

Query:   760 VTDIFVRTRNMLEAIASGKPVVTHLWLESIAQVKIHIDEESYLLRDTKKEKEFGFSMPAS 819
             VTD   RT   L A+A G P+VT  WL+   +    I  + Y+L+D ++EK+F F +  S
Sbjct:  1737 VTDKARRTVKFLCAVARGVPIVTPDWLKKCGKAGHFISADDYILKDIEQEKKFDFCLEKS 1796

Query:   820 LARARKHPLLKDQRVLITPNIKPSKETISSLIKSVHGQAVERLGRSAXXXXXXXXXXXIL 879
             L  A+   LLK   + +TP++ P    +  +I     + + ++  SA           ++
Sbjct:  1797 LQTAQSQSLLKGYEIHVTPSVMPEPSQMKEIITCCGARFLPKMP-SAHKEHVV-----VV 1850

Query:   880 SCEEDYEICEPFLEKGAAVYSSELLLNGMVTQKLEYERY 918
             SCE+D  +C   +     V S+E LL G++ Q+++ + Y
Sbjct:  1851 SCEQDRVLCAKAVGMSLPVVSTEFLLTGILQQRVDLQAY 1889

 Score = 44 (20.5 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query:    10 SCFGQSADLSPDQDAVRNDGSEPKVVEEIDNIHDLKDNETEKGLRNG 56
             S F     L  + +    D SEP  + E ++  ++++ E E+ ++ G
Sbjct:   784 SLFTAQTQLVWEGEGKEVDQSEPTQLIEAESNDEMQEGENEEMIKQG 830

 Score = 42 (19.8 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
 Identities = 10/40 (25%), Positives = 15/40 (37%)

Query:   620 SDGKIVVDSQPSAENAEMNSRLDKSPREQCEALESPCTSP 659
             S   + +DS    E  E ++   K        L+ P  SP
Sbjct:   444 SSADLHIDSDTDVEEEESDASKAKPEAHNAVTLDKPAPSP 483

 Score = 40 (19.1 bits), Expect = 6.1e-15, Sum P(3) = 6.1e-15
 Identities = 23/99 (23%), Positives = 42/99 (42%)

Query:     1 MASKEISIDSCFG---QSADLS---PD-QDAVRNDGSEPKVVEEIDNIHDLKDNETEKGL 53
             ++S ++ IDS      + +D S   P+  +AV  D   P     ID+  D++++E EK  
Sbjct:   443 VSSADLHIDSDTDVEEEESDASKAKPEAHNAVTLDKPAPSPGLHIDSDTDVEEDEEEKSK 502

Query:    54 RNGNSCRVGSSTVRKLFTEDSVSQDKGLPNNGDNAAGGE 92
                 +  + S     L  +     ++  P    NA  G+
Sbjct:   503 TKQKAEIIKSVASTDLHMDSDTDVEEEEPE-ASNAKPGD 540

 Score = 39 (18.8 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
 Identities = 13/63 (20%), Positives = 27/63 (42%)

Query:   400 EKCDRELATLNKRRAKSMDEQNSTINGSKNMDRVSSGIIGQRNEDGSLESCQPKEFNRCL 459
             E  D E  +    R++S     S+   + ++   + G  G+     S+   QP+E ++  
Sbjct:  1567 EVADTEQDSSLTTRSRSRSSSRSSERSANSVQSSNQGTRGRGRARKSVNLPQPEEVSQTK 1626

Query:   460 RTE 462
              +E
Sbjct:  1627 PSE 1629

 Score = 38 (18.4 bits), Expect = 7.7e-15, Sum P(3) = 7.7e-15
 Identities = 7/20 (35%), Positives = 13/20 (65%)

Query:   551 FGELKSTKPSQPEKLDLELT 570
             +G   ++   +P++LDLE T
Sbjct:   687 YGAASTSAVLKPKRLDLEAT 706

 Score = 37 (18.1 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
 Identities = 13/45 (28%), Positives = 22/45 (48%)

Query:   273 SELD-ERLNADSSRGQPDAAVGKTDVSQILNVGPDTQLAAEAMEA 316
             S+ D E    + S+ +  A + K+  S  L++  DT +  E  EA
Sbjct:   489 SDTDVEEDEEEKSKTKQKAEIIKSVASTDLHMDSDTDVEEEEPEA 533


>RGD|1559468 [details] [associations]
            symbol:Mdc1 "mediator of DNA damage checkpoint 1" species:10116
            "Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO]
            [GO:0005694 "chromosome" evidence=IEA;ISO;ISS] [GO:0005925 "focal
            adhesion" evidence=IEA;ISO] [GO:0006281 "DNA repair" evidence=IEA]
            [GO:0007049 "cell cycle" evidence=IEA] [GO:0008022 "protein
            C-terminus binding" evidence=IEA;ISO] [GO:0070975 "FHA domain
            binding" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
            SMART:SM00240 InterPro:IPR001357 RGD:1559468 GO:GO:0005634
            GO:GO:0005694 GO:GO:0006281 GO:GO:0005925 Gene3D:2.60.200.20
            SUPFAM:SSF49879 EMBL:BX883048 GO:GO:0007049 eggNOG:NOG12793
            SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 CTD:9656
            HOVERGEN:HBG080567 OrthoDB:EOG43BMN6 HOGENOM:HOG000113506
            EMBL:BC085955 IPI:IPI00953795 RefSeq:NP_001159747.1
            UniGene:Rn.106312 ProteinModelPortal:Q5U2M8 SMR:Q5U2M8
            STRING:Q5U2M8 PRIDE:Q5U2M8 GeneID:309595 KEGG:rno:309595
            UCSC:RGD:1559468 InParanoid:Q5U2M8 NextBio:661028
            ArrayExpress:Q5U2M8 Genevestigator:Q5U2M8
            GermOnline:ENSRNOG00000032813 Uniprot:Q5U2M8
        Length = 1279

 Score = 230 (86.0 bits), Expect = 8.1e-14, Sum P(4) = 8.1e-14
 Identities = 60/215 (27%), Positives = 107/215 (49%)

Query:   708 SPLKDLRKR--RDMASIQVLFSHHLDEDIIKQQKKILDRLGASEVSSITDATHFVTDIFV 765
             +P +  R +  ++ A+ +VLF+  +D    + ++ +L  LG S  SS+ +A+H VTD   
Sbjct:  1070 NPTRSRRTKPNQEAAAPKVLFTGVVDS---RGERAVL-ALGGSLASSVNEASHLVTDRIR 1125

Query:   766 RTRNMLEAIASGKPVVTHLWLESIAQVKIHIDEESYLLRDTKKEKEFGFSMPASLARARK 825
             RT   L A+  G P+++  WL    +    +  + YL+ D ++EK F FS+  SL+RAR+
Sbjct:  1126 RTVKFLCAVGKGIPILSLNWLYQSRKAGCFLPPDDYLVTDPEQEKNFSFSLRDSLSRARE 1185

Query:   826 HPLLKDQRVLITPNIKPSKETISSLIKSVHGQAVERLGRSAXXXXXXXXXXXILSCEEDY 885
               LL+D  + +TP ++P    +  +I    G  +  +  S            +++C ED 
Sbjct:  1186 RRLLEDYEIHVTPGVQPPPPQMGEIISCCGGTVLPSMPHS------YKLHRVVITCTEDL 1239

Query:   886 EICEPFLEKGAAVYSSELLLNGMVTQKLEYERYYM 920
               C      G  + S E LL G++ Q+   E + +
Sbjct:  1240 PRCAIASRLGLPLLSPEFLLTGVLKQEATPEAFVL 1274

 Score = 47 (21.6 bits), Expect = 8.1e-14, Sum P(4) = 8.1e-14
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query:   422 STINGSKNMDRVSSGIIGQRNEDGS 446
             S  NGS+N    S+ ++ + +E+GS
Sbjct:   179 SVANGSRNTASPSATVVPESDEEGS 203

 Score = 46 (21.3 bits), Expect = 8.1e-14, Sum P(4) = 8.1e-14
 Identities = 21/116 (18%), Positives = 36/116 (31%)

Query:   556 STKPSQPEKLDLELTAMNNGVDGLXXXXXXXXXXNLSVQVSGCSAGMNVKVKSKDFKGSK 615
             S+ P    ++  +  A + G +             +  Q    +A +   V   D  G  
Sbjct:   548 SSSPVADIRMSQQPVAEDAGTECAAAVSEQKSALEVGAQSRSPAAPVEQVVVRTDTSGDP 607

Query:   616 TPNHSDGKIVVDSQPSAENAEMNSRLDKSPREQCEALESPCTSPANCITPVNAASP 671
             T    +G       P+    E +    K  +E C+  E  C S   C     +  P
Sbjct:   608 TLPQREGA----QTPTGREREAHVGGTKHAKECCDEPEDLCLSATQCFVEGESQHP 659

 Score = 38 (18.4 bits), Expect = 8.1e-14, Sum P(4) = 8.1e-14
 Identities = 6/13 (46%), Positives = 8/13 (61%)

Query:   178 TGIYDWDDSREDE 190
             T + DWD   E+E
Sbjct:     4 TQVIDWDAEEEEE 16


>UNIPROTKB|Q5U2M8 [details] [associations]
            symbol:Mdc1 "Mediator of DNA damage checkpoint protein 1"
            species:10116 "Rattus norvegicus" [GO:0005925 "focal adhesion"
            evidence=IEA] [GO:0008022 "protein C-terminus binding"
            evidence=IEA] [GO:0070975 "FHA domain binding" evidence=IEA]
            InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
            SMART:SM00240 InterPro:IPR001357 RGD:1559468 GO:GO:0005634
            GO:GO:0005694 GO:GO:0006281 GO:GO:0005925 Gene3D:2.60.200.20
            SUPFAM:SSF49879 EMBL:BX883048 GO:GO:0007049 eggNOG:NOG12793
            SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 CTD:9656
            HOVERGEN:HBG080567 OrthoDB:EOG43BMN6 HOGENOM:HOG000113506
            EMBL:BC085955 IPI:IPI00953795 RefSeq:NP_001159747.1
            UniGene:Rn.106312 ProteinModelPortal:Q5U2M8 SMR:Q5U2M8
            STRING:Q5U2M8 PRIDE:Q5U2M8 GeneID:309595 KEGG:rno:309595
            UCSC:RGD:1559468 InParanoid:Q5U2M8 NextBio:661028
            ArrayExpress:Q5U2M8 Genevestigator:Q5U2M8
            GermOnline:ENSRNOG00000032813 Uniprot:Q5U2M8
        Length = 1279

 Score = 230 (86.0 bits), Expect = 8.1e-14, Sum P(4) = 8.1e-14
 Identities = 60/215 (27%), Positives = 107/215 (49%)

Query:   708 SPLKDLRKR--RDMASIQVLFSHHLDEDIIKQQKKILDRLGASEVSSITDATHFVTDIFV 765
             +P +  R +  ++ A+ +VLF+  +D    + ++ +L  LG S  SS+ +A+H VTD   
Sbjct:  1070 NPTRSRRTKPNQEAAAPKVLFTGVVDS---RGERAVL-ALGGSLASSVNEASHLVTDRIR 1125

Query:   766 RTRNMLEAIASGKPVVTHLWLESIAQVKIHIDEESYLLRDTKKEKEFGFSMPASLARARK 825
             RT   L A+  G P+++  WL    +    +  + YL+ D ++EK F FS+  SL+RAR+
Sbjct:  1126 RTVKFLCAVGKGIPILSLNWLYQSRKAGCFLPPDDYLVTDPEQEKNFSFSLRDSLSRARE 1185

Query:   826 HPLLKDQRVLITPNIKPSKETISSLIKSVHGQAVERLGRSAXXXXXXXXXXXILSCEEDY 885
               LL+D  + +TP ++P    +  +I    G  +  +  S            +++C ED 
Sbjct:  1186 RRLLEDYEIHVTPGVQPPPPQMGEIISCCGGTVLPSMPHS------YKLHRVVITCTEDL 1239

Query:   886 EICEPFLEKGAAVYSSELLLNGMVTQKLEYERYYM 920
               C      G  + S E LL G++ Q+   E + +
Sbjct:  1240 PRCAIASRLGLPLLSPEFLLTGVLKQEATPEAFVL 1274

 Score = 47 (21.6 bits), Expect = 8.1e-14, Sum P(4) = 8.1e-14
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query:   422 STINGSKNMDRVSSGIIGQRNEDGS 446
             S  NGS+N    S+ ++ + +E+GS
Sbjct:   179 SVANGSRNTASPSATVVPESDEEGS 203

 Score = 46 (21.3 bits), Expect = 8.1e-14, Sum P(4) = 8.1e-14
 Identities = 21/116 (18%), Positives = 36/116 (31%)

Query:   556 STKPSQPEKLDLELTAMNNGVDGLXXXXXXXXXXNLSVQVSGCSAGMNVKVKSKDFKGSK 615
             S+ P    ++  +  A + G +             +  Q    +A +   V   D  G  
Sbjct:   548 SSSPVADIRMSQQPVAEDAGTECAAAVSEQKSALEVGAQSRSPAAPVEQVVVRTDTSGDP 607

Query:   616 TPNHSDGKIVVDSQPSAENAEMNSRLDKSPREQCEALESPCTSPANCITPVNAASP 671
             T    +G       P+    E +    K  +E C+  E  C S   C     +  P
Sbjct:   608 TLPQREGA----QTPTGREREAHVGGTKHAKECCDEPEDLCLSATQCFVEGESQHP 659

 Score = 38 (18.4 bits), Expect = 8.1e-14, Sum P(4) = 8.1e-14
 Identities = 6/13 (46%), Positives = 8/13 (61%)

Query:   178 TGIYDWDDSREDE 190
             T + DWD   E+E
Sbjct:     4 TQVIDWDAEEEEE 16


>UNIPROTKB|F1RUB0 [details] [associations]
            symbol:MDC1 "Mediator of DNA damage checkpoint protein 1"
            species:9823 "Sus scrofa" [GO:0070975 "FHA domain binding"
            evidence=IEA] [GO:0008022 "protein C-terminus binding"
            evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
            [GO:0005694 "chromosome" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498
            PROSITE:PS50006 SMART:SM00240 InterPro:IPR001357 GO:GO:0005634
            GO:GO:0005925 Gene3D:2.60.200.20 SUPFAM:SSF49879 SUPFAM:SSF52113
            PROSITE:PS50172 OMA:SVKTPET GeneTree:ENSGT00600000084454
            EMBL:CU480634 Ensembl:ENSSSCT00000001480 ArrayExpress:F1RUB0
            Uniprot:F1RUB0
        Length = 2042

 Score = 246 (91.7 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
 Identities = 65/224 (29%), Positives = 115/224 (51%)

Query:   702 TEPEPLS-PLKDLRKRR---DMASIQVLFSHHLDEDIIKQQKKILDRLGASEVSSITDAT 757
             TE EP   P + LR+ +   +  + +VLF+  +D    + ++ +L  LG S  SS+ +A+
Sbjct:  1822 TEEEPRGVPSRSLRRTKPAQESTAPRVLFTGVVDA---RGERAVL-ALGGSLASSVAEAS 1877

Query:   758 HFVTDIFVRTRNMLEAIASGKPVVTHLWLESIAQVKIHIDEESYLLRDTKKEKEFGFSMP 817
             H VTD   RT   L A+  G P+++  WL    +    +  + Y++ D ++EK FGFS+ 
Sbjct:  1878 HLVTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAGCFLPPDEYVVTDPEQEKNFGFSLR 1937

Query:   818 ASLARARKHPLLKDQRVLITPNIKPSKETISSLIKSVHGQAVERLGRSAXXXXXXXXXXX 877
              +L+RAR+  LL+   + +TP ++P    +  +I    G  +  + RS            
Sbjct:  1938 EALSRARERKLLEGYEIHVTPGVQPPPPQMGEIISCCGGTVLPSMPRS------YKPQRV 1991

Query:   878 ILSCEEDYEICE-PFLEKGAAVYSSELLLNGMVTQKLEYERYYM 920
             +++C +D+  C  PF   G  V S E LL G++ Q+ + E + +
Sbjct:  1992 VITCSQDFPRCSVPF-RLGLPVLSPEFLLTGVLKQEAKPEAFVL 2034

 Score = 39 (18.8 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query:    28 DGSEPKVVEEIDNIHDLKDNETEK 51
             DG    +  EI+   ++++NE EK
Sbjct:   874 DGGLESLQVEIETPKEMQENEIEK 897

 Score = 38 (18.4 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
 Identities = 9/33 (27%), Positives = 13/33 (39%)

Query:   452 PKEFNRCLRTETQNADHSIKKQKIAKAPSASTP 484
             P+  +R  R  T  A     +Q +  AP    P
Sbjct:  1292 PEPLSRATRGRTPRASVKSPEQNVPTAPEHPQP 1324

 Score = 37 (18.1 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
 Identities = 19/87 (21%), Positives = 31/87 (35%)

Query:   368 GVATRQKRKSKSGTEISRCSPDNSVKNFKNISEKCDRELATLNKRRAKSMDEQNSTINGS 427
             G A +   K+      +   P  S    + I+ K        ++  AK+ + Q  T  G 
Sbjct:  1532 GRARKSSVKTPEPVVPTAAEPQPSASTDQPITPK-PTSRGRAHRSSAKTPELQPPTSTGQ 1590

Query:   428 KNMDRVSSGIIGQRNEDGSLESCQPKE 454
                 R +SG    R    S ++ Q  E
Sbjct:  1591 PVTPRPTSGATQGRTHRSSAKTSQAVE 1617


>UNIPROTKB|Q767L8 [details] [associations]
            symbol:MDC1 "Mediator of DNA damage checkpoint protein 1"
            species:9823 "Sus scrofa" [GO:0005694 "chromosome" evidence=ISS]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
            InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
            SMART:SM00240 InterPro:IPR001357 GO:GO:0005634 GO:GO:0005694
            GO:GO:0006281 Gene3D:2.60.200.20 SUPFAM:SSF49879 EMBL:AB113357
            GO:GO:0007049 eggNOG:NOG12793 SUPFAM:SSF52113 PROSITE:PS50172
            EMBL:AB113356 CTD:9656 HOVERGEN:HBG080567 OrthoDB:EOG43BMN6
            HOGENOM:HOG000113506 RefSeq:NP_001116610.1 UniGene:Ssc.70644
            ProteinModelPortal:Q767L8 SMR:Q767L8 STRING:Q767L8 GeneID:100144453
            KEGG:ssc:100144453 Uniprot:Q767L8
        Length = 2042

 Score = 246 (91.7 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
 Identities = 65/224 (29%), Positives = 115/224 (51%)

Query:   702 TEPEPLS-PLKDLRKRR---DMASIQVLFSHHLDEDIIKQQKKILDRLGASEVSSITDAT 757
             TE EP   P + LR+ +   +  + +VLF+  +D    + ++ +L  LG S  SS+ +A+
Sbjct:  1822 TEEEPRGVPSRSLRRTKPAQESTAPRVLFTGVVDA---RGERAVL-ALGGSLASSVAEAS 1877

Query:   758 HFVTDIFVRTRNMLEAIASGKPVVTHLWLESIAQVKIHIDEESYLLRDTKKEKEFGFSMP 817
             H VTD   RT   L A+  G P+++  WL    +    +  + Y++ D ++EK FGFS+ 
Sbjct:  1878 HLVTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAGCFLPPDEYVVTDPEQEKNFGFSLR 1937

Query:   818 ASLARARKHPLLKDQRVLITPNIKPSKETISSLIKSVHGQAVERLGRSAXXXXXXXXXXX 877
              +L+RAR+  LL+   + +TP ++P    +  +I    G  +  + RS            
Sbjct:  1938 EALSRARERKLLEGYEIHVTPGVQPPPPQMGEIISCCGGTVLPSMPRS------YKPQRV 1991

Query:   878 ILSCEEDYEICE-PFLEKGAAVYSSELLLNGMVTQKLEYERYYM 920
             +++C +D+  C  PF   G  V S E LL G++ Q+ + E + +
Sbjct:  1992 VITCSQDFPRCSVPF-RLGLPVLSPEFLLTGVLKQEAKPEAFVL 2034

 Score = 39 (18.8 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query:    28 DGSEPKVVEEIDNIHDLKDNETEK 51
             DG    +  EI+   ++++NE EK
Sbjct:   874 DGGLESLQVEIETPKEMQENEIEK 897

 Score = 38 (18.4 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
 Identities = 9/33 (27%), Positives = 13/33 (39%)

Query:   452 PKEFNRCLRTETQNADHSIKKQKIAKAPSASTP 484
             P+  +R  R  T  A     +Q +  AP    P
Sbjct:  1292 PEPLSRATRGRTPRASVKSPEQNVPTAPEHPQP 1324

 Score = 37 (18.1 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
 Identities = 19/87 (21%), Positives = 31/87 (35%)

Query:   368 GVATRQKRKSKSGTEISRCSPDNSVKNFKNISEKCDRELATLNKRRAKSMDEQNSTINGS 427
             G A +   K+      +   P  S    + I+ K        ++  AK+ + Q  T  G 
Sbjct:  1532 GRARKSSVKTPEPAVPTAAEPQPSASTDQPITPK-PTSRGRAHRSSAKTPELQPPTSTGQ 1590

Query:   428 KNMDRVSSGIIGQRNEDGSLESCQPKE 454
                 R +SG    R    S ++ Q  E
Sbjct:  1591 PFTPRPTSGATQGRTHRSSAKTSQAVE 1617


>UNIPROTKB|F8W1C2 [details] [associations]
            symbol:MDC1 "Mediator of DNA damage checkpoint protein 1"
            species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0005925 "focal adhesion"
            evidence=IDA] InterPro:IPR001357 GO:GO:0005634 GO:GO:0005925
            SUPFAM:SSF52113 PROSITE:PS50172 EMBL:AL662848 EMBL:BX927283
            EMBL:CR936878 EMBL:CR788240 EMBL:CR759873 HGNC:HGNC:21163
            ChiTaRS:MDC1 IPI:IPI00937211 SMR:F8W1C2 Ensembl:ENST00000548805
            Ensembl:ENST00000549771 Ensembl:ENST00000550110
            Ensembl:ENST00000550210 Ensembl:ENST00000551267 Uniprot:F8W1C2
        Length = 1655

 Score = 229 (85.7 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
 Identities = 60/221 (27%), Positives = 111/221 (50%)

Query:   703 EPEPLSPLKDLRKRR---DMASIQVLFSHHLDEDIIKQQKKILDRLGASEVSSITDATHF 759
             EP  + P + LR+ +   +  + +VLF+  +D    + ++ +L  LG S   S  +A+H 
Sbjct:  1438 EPNRI-PSRSLRRTKLNQESTAPKVLFTGVVDA---RGERAVL-ALGGSLAGSAAEASHL 1492

Query:   760 VTDIFVRTRNMLEAIASGKPVVTHLWLESIAQVKIHIDEESYLLRDTKKEKEFGFSMPAS 819
             VTD   RT   L A+  G P+++  WL    +    +  + Y++ D ++EK FGFS+  +
Sbjct:  1493 VTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAGFFLPPDEYVVTDPEQEKNFGFSLQDA 1552

Query:   820 LARARKHPLLKDQRVLITPNIKPSKETISSLIKSVHGQAVERLGRSAXXXXXXXXXXXIL 879
             L+RAR+  LL+   + +TP ++P    +  +I    G  +  + RS            ++
Sbjct:  1553 LSRARERRLLEGYEIYVTPGVQPPPPQMGEIISCCGGTYLPSMPRS------YKPQRVVI 1606

Query:   880 SCEEDYEICEPFLEKGAAVYSSELLLNGMVTQKLEYERYYM 920
             +C +D+  C   L  G  + S E LL G++ Q+ + E + +
Sbjct:  1607 TCPQDFPHCSIPLRVGLPLLSPEFLLTGVLKQEAKPEAFVL 1647

 Score = 41 (19.5 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
 Identities = 19/75 (25%), Positives = 30/75 (40%)

Query:    48 ETEKGLRNGNSCRVGSSTVRKLFTEDSVSQDKGLPNNGDNAAGGENLLQFPVNDDELAGL 107
             E     R G +     S   ++ TE  + +D+ L    DN      + +   N    AG+
Sbjct:   104 EASSAARRGATVEAKQSEA-EVVTEIQLEKDQPLVKERDNDT---KVKRGAGNGVVPAGV 159

Query:   108 SYVDSQEPGEFSEAN 122
                 SQ PGE S+ +
Sbjct:   160 ILERSQPPGEDSDTD 174


>UNIPROTKB|Q14676 [details] [associations]
            symbol:MDC1 "Mediator of DNA damage checkpoint protein 1"
            species:9606 "Homo sapiens" [GO:0008022 "protein C-terminus
            binding" evidence=IPI] [GO:0031573 "intra-S DNA damage checkpoint"
            evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0070975 "FHA domain binding" evidence=IPI] [GO:0005694
            "chromosome" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0000724 "double-strand break repair via homologous
            recombination" evidence=TAS] [GO:0005654 "nucleoplasm"
            evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006302
            "double-strand break repair" evidence=TAS] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005925 "focal adhesion" evidence=IDA]
            Reactome:REACT_216 InterPro:IPR000253 InterPro:IPR008984
            Pfam:PF00498 PROSITE:PS50006 SMART:SM00240 InterPro:IPR001357
            GO:GO:0005694 GO:GO:0005654 EMBL:BA000025 EMBL:CH471081
            GO:GO:0005925 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0007049
            GO:GO:0000724 eggNOG:NOG12793 SMART:SM00292 SUPFAM:SSF52113
            PROSITE:PS50172 EMBL:AL845353 GO:GO:0031573 EMBL:AL662797
            EMBL:D79992 EMBL:CR749828 EMBL:AB088099 EMBL:AB202097 EMBL:AB103605
            EMBL:AL662848 EMBL:BX248307 EMBL:BX927283 EMBL:CR936878
            EMBL:CR788240 EMBL:CR759873 EMBL:BC110645 EMBL:BC152556
            IPI:IPI00470805 IPI:IPI00552897 IPI:IPI00895842 IPI:IPI00895860
            RefSeq:NP_055456.2 UniGene:Hs.653495 PDB:2ADO PDB:2AZM PDB:2ETX
            PDB:3K05 PDB:3UMZ PDB:3UN0 PDB:3UNM PDB:3UNN PDB:3UOT PDBsum:2ADO
            PDBsum:2AZM PDBsum:2ETX PDBsum:3K05 PDBsum:3UMZ PDBsum:3UN0
            PDBsum:3UNM PDBsum:3UNN PDBsum:3UOT ProteinModelPortal:Q14676
            SMR:Q14676 DIP:DIP-33603N IntAct:Q14676 MINT:MINT-259925
            STRING:Q14676 PhosphoSite:Q14676 DMDM:68565390 PaxDb:Q14676
            PRIDE:Q14676 Ensembl:ENST00000376405 Ensembl:ENST00000376406
            Ensembl:ENST00000383566 Ensembl:ENST00000420019
            Ensembl:ENST00000420320 Ensembl:ENST00000427406
            Ensembl:ENST00000435664 Ensembl:ENST00000440369
            Ensembl:ENST00000449153 Ensembl:ENST00000546487
            Ensembl:ENST00000547047 Ensembl:ENST00000547874
            Ensembl:ENST00000548112 Ensembl:ENST00000548542
            Ensembl:ENST00000550004 Ensembl:ENST00000551204
            Ensembl:ENST00000551460 Ensembl:ENST00000552263
            Ensembl:ENST00000553048 GeneID:9656 KEGG:hsa:9656 UCSC:uc003nrf.4
            UCSC:uc003nrg.4 UCSC:uc011dmp.1 CTD:9656 GeneCards:GC06M030667
            HGNC:HGNC:21163 HPA:HPA006915 MIM:607593 neXtProt:NX_Q14676
            PharmGKB:PA134942837 HOVERGEN:HBG080567 InParanoid:Q14676
            OMA:SVKTPET OrthoDB:EOG43BMN6 ChiTaRS:MDC1 EvolutionaryTrace:Q14676
            GenomeRNAi:9656 NextBio:36251 ArrayExpress:Q14676 Bgee:Q14676
            Genevestigator:Q14676 GermOnline:ENSG00000137337 Uniprot:Q14676
        Length = 2089

 Score = 229 (85.7 bits), Expect = 2.6e-13, Sum P(4) = 2.6e-13
 Identities = 60/221 (27%), Positives = 111/221 (50%)

Query:   703 EPEPLSPLKDLRKRR---DMASIQVLFSHHLDEDIIKQQKKILDRLGASEVSSITDATHF 759
             EP  + P + LR+ +   +  + +VLF+  +D    + ++ +L  LG S   S  +A+H 
Sbjct:  1872 EPNRI-PSRSLRRTKLNQESTAPKVLFTGVVDA---RGERAVL-ALGGSLAGSAAEASHL 1926

Query:   760 VTDIFVRTRNMLEAIASGKPVVTHLWLESIAQVKIHIDEESYLLRDTKKEKEFGFSMPAS 819
             VTD   RT   L A+  G P+++  WL    +    +  + Y++ D ++EK FGFS+  +
Sbjct:  1927 VTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAGFFLPPDEYVVTDPEQEKNFGFSLQDA 1986

Query:   820 LARARKHPLLKDQRVLITPNIKPSKETISSLIKSVHGQAVERLGRSAXXXXXXXXXXXIL 879
             L+RAR+  LL+   + +TP ++P    +  +I    G  +  + RS            ++
Sbjct:  1987 LSRARERRLLEGYEIYVTPGVQPPPPQMGEIISCCGGTYLPSMPRS------YKPQRVVI 2040

Query:   880 SCEEDYEICEPFLEKGAAVYSSELLLNGMVTQKLEYERYYM 920
             +C +D+  C   L  G  + S E LL G++ Q+ + E + +
Sbjct:  2041 TCPQDFPHCSIPLRVGLPLLSPEFLLTGVLKQEAKPEAFVL 2081

 Score = 58 (25.5 bits), Expect = 2.6e-13, Sum P(4) = 2.6e-13
 Identities = 20/87 (22%), Positives = 38/87 (43%)

Query:   396 KNISEKCDRELATLNKRRAKSMDEQNSTINGSKNM-----DRVSSGIIG---QRNE-DGS 446
             K  +E+   E   L +   K + E+ + + G + +     DR    ++    QR E D +
Sbjct:   818 KETAERVGPERGPLERETEKLLPERQTDVTGEEELTKGKQDREQKQLLARDTQRQESDKN 877

Query:   447 LESCQPKEFNRCLRTETQNADHSIKKQ 473
              ES  P+     L+ E + ++   +KQ
Sbjct:   878 GESASPERDRESLKVEIETSEEIQEKQ 904

 Score = 41 (19.5 bits), Expect = 2.6e-13, Sum P(4) = 2.6e-13
 Identities = 19/75 (25%), Positives = 30/75 (40%)

Query:    48 ETEKGLRNGNSCRVGSSTVRKLFTEDSVSQDKGLPNNGDNAAGGENLLQFPVNDDELAGL 107
             E     R G +     S   ++ TE  + +D+ L    DN      + +   N    AG+
Sbjct:   232 EASSAARRGATVEAKQSEA-EVVTEIQLEKDQPLVKERDNDT---KVKRGAGNGVVPAGV 287

Query:   108 SYVDSQEPGEFSEAN 122
                 SQ PGE S+ +
Sbjct:   288 ILERSQPPGEDSDTD 302

 Score = 38 (18.4 bits), Expect = 2.6e-13, Sum P(4) = 2.6e-13
 Identities = 21/83 (25%), Positives = 32/83 (38%)

Query:   608 SKDFKG-SKTPNHSDGKIVVD-----SQPSAENAEMNSRLDK-SPREQCEALESPCTSPA 660
             S+D KG + +P    G    D     S P    ++   R    SPR   + L +    PA
Sbjct:   955 SQDQKGQASSPTPEPGVGAGDLPGPTSAPVPSGSQSGGRGSPVSPRRHQKGLLNCKMPPA 1014

Query:   661 NCITPVNAASPVCMGNGYIKQSC 683
                + + AA  V  G+     +C
Sbjct:  1015 EKASRIRAAEKVSRGDQESPDAC 1037


>UNIPROTKB|E1BI26 [details] [associations]
            symbol:MDC1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0070975 "FHA domain binding" evidence=IEA] [GO:0008022
            "protein C-terminus binding" evidence=IEA] [GO:0005925 "focal
            adhesion" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001357
            GO:GO:0005634 GO:GO:0005925 SUPFAM:SSF52113 PROSITE:PS50172
            OMA:SVKTPET GeneTree:ENSGT00600000084454 EMBL:DAAA02055400
            IPI:IPI00710736 Ensembl:ENSBTAT00000035900 Uniprot:E1BI26
        Length = 1768

 Score = 240 (89.5 bits), Expect = 2.9e-13, Sum P(3) = 2.9e-13
 Identities = 63/221 (28%), Positives = 112/221 (50%)

Query:   702 TEPEPLS-PLKDLRKRR---DMASIQVLFSHHLDEDIIKQQKKILDRLGASEVSSITDAT 757
             TE E    P + LR+ +   +  + +VLF+  +D    + ++ +L  LG S  SS+ +A+
Sbjct:  1548 TEEESQGRPSRSLRRTKPVQESTAPKVLFTGVVDA---RGERTVL-ALGGSLASSVAEAS 1603

Query:   758 HFVTDIFVRTRNMLEAIASGKPVVTHLWLESIAQVKIHIDEESYLLRDTKKEKEFGFSMP 817
             H VTD   RT   L A+  G P+++  WL    +    +  + YL+ D ++EK FGFS+ 
Sbjct:  1604 HLVTDRIRRTVKFLCALGRGIPILSLAWLHESRKAGCFLPPDEYLVTDPEQEKNFGFSLR 1663

Query:   818 ASLARARKHPLLKDQRVLITPNIKPSKETISSLIKSVHGQAVERLGRSAXXXXXXXXXXX 877
              +L+RAR+  LL+   + +TP ++P    +  +I    G  +  + RS            
Sbjct:  1664 EALSRARERRLLEGYEIHVTPGVQPPPPQMGEIINCCGGAILPSMPRS------YKPQRV 1717

Query:   878 ILSCEEDYEICEPFLEKGAAVYSSELLLNGMVTQKLEYERY 918
             +++C +D+  C      G  V S E LL G++ Q+++ E +
Sbjct:  1718 VITCSQDFPRCAVPYRVGLPVLSPEFLLTGVLKQEVKPEAF 1758

 Score = 40 (19.1 bits), Expect = 2.9e-13, Sum P(3) = 2.9e-13
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query:   609 KDFKGSKTPNHSDGKIVVDSQPSAENAEMNSRLDKSP 645
             +D K    P    G I+  SQPS E+++ +   +  P
Sbjct:   110 RDVKNGVVPT---GVILERSQPSGEDSDTDVSDESGP 143

 Score = 38 (18.4 bits), Expect = 4.6e-13, Sum P(3) = 4.6e-13
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query:   366 GVGVATRQKRKSKSGTEISRCSPDNSVKNFKNISE 400
             GV +    KR+ +   E S+  P  S++  K + E
Sbjct:  1534 GVVIPGPGKRRREQTEEESQGRPSRSLRRTKPVQE 1568

 Score = 37 (18.1 bits), Expect = 2.9e-13, Sum P(3) = 2.9e-13
 Identities = 8/22 (36%), Positives = 13/22 (59%)

Query:   270 NLLSELDERLNADSSRGQPDAA 291
             NL S+ DE  + +S  G+  +A
Sbjct:    50 NLNSDTDEEESQESGAGEASSA 71


>UNIPROTKB|F1P482 [details] [associations]
            symbol:PAXIP1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000416 "positive regulation of histone H3-K36
            methylation" evidence=IEA] [GO:0001570 "vasculogenesis"
            evidence=IEA] [GO:0010212 "response to ionizing radiation"
            evidence=IEA] [GO:0030330 "DNA damage response, signal transduction
            by p53 class mediator" evidence=IEA] [GO:0031398 "positive
            regulation of protein ubiquitination" evidence=IEA] [GO:0035066
            "positive regulation of histone acetylation" evidence=IEA]
            [GO:0035097 "histone methyltransferase complex" evidence=IEA]
            [GO:0043542 "endothelial cell migration" evidence=IEA] [GO:0045830
            "positive regulation of isotype switching" evidence=IEA]
            [GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0051571
            "positive regulation of histone H3-K4 methylation" evidence=IEA]
            [GO:0060261 "positive regulation of transcription initiation from
            RNA polymerase II promoter" evidence=IEA] [GO:0060612 "adipose
            tissue development" evidence=IEA] [GO:0060717 "chorion development"
            evidence=IEA] InterPro:IPR001357 Pfam:PF00533 GO:GO:0010212
            GO:GO:0035066 GO:GO:0031398 SMART:SM00292 SUPFAM:SSF52113
            PROSITE:PS50172 GO:GO:0051568 GO:GO:0030330 GO:GO:0051571
            GO:GO:0043542 GO:GO:0035097 GO:GO:0060261 OMA:DIQQINR GO:GO:0000416
            GO:GO:0045830 GeneTree:ENSGT00600000084454 EMBL:AADN02000335
            EMBL:AADN02000336 EMBL:AADN02000337 IPI:IPI00594414
            Ensembl:ENSGALT00000010241 Uniprot:F1P482
        Length = 1062

 Score = 215 (80.7 bits), Expect = 9.8e-13, Sum P(2) = 9.8e-13
 Identities = 54/175 (30%), Positives = 86/175 (49%)

Query:   735 IKQQKKILDRLGASEVSSITDATHFVTDIFVRTRNMLEAIASGKPVVTHLWLESIAQVKI 794
             ++Q  K L  LG     S    TH +     RT   L AI+  K +VT  WLE   + + 
Sbjct:   888 VQQYIKKLYILGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFKCQK 947

Query:   795 HIDEESYLLRDTKKEKEFGFSMPASLARARKHPLLKDQRVLITPNIKPSKETISSLIKSV 854
              +DE++++LRD + E  F FS+  SL RA+  PL K +   ITP I PS  T+ ++++  
Sbjct:   948 FVDEQNFVLRDAEAEVLFCFSLEESLKRAQVAPLFKGKYFYITPGICPSLSTMKAIVECA 1007

Query:   855 HGQAVERLG--RSAXXXXXXXXXXXIL--SCEEDYEICEPFLEKGAAVYSSELLL 905
              G+ + +    R             I+  SCE D  +C  +  +G  V+++E +L
Sbjct:  1008 GGKVLSKQPSFRKLMEHKQNKSLPEIILISCENDLHLCREYFARGIDVHNAEFVL 1062

 Score = 44 (20.5 bits), Expect = 9.8e-13, Sum P(2) = 9.8e-13
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query:   627 DSQPSAENAEMNSRLDKSPREQCEALESPCTS 658
             + +  AEN E +S+ + S  E+   L SP TS
Sbjct:   202 EEEEEAENEEQDSQNEASTDEK---LSSPATS 230


>UNIPROTKB|Q5TM68 [details] [associations]
            symbol:MDC1 "Mediator of DNA damage checkpoint protein 1"
            species:9544 "Macaca mulatta" [GO:0005694 "chromosome"
            evidence=ISS] InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498
            PROSITE:PS50006 SMART:SM00240 InterPro:IPR001357 GO:GO:0005634
            GO:GO:0005694 GO:GO:0006281 GO:GO:0005925 Gene3D:2.60.200.20
            SUPFAM:SSF49879 GO:GO:0007049 eggNOG:NOG12793 EMBL:AB128049
            SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 CTD:9656
            HOVERGEN:HBG080567 OrthoDB:EOG43BMN6 RefSeq:NP_001108419.1
            UniGene:Mmu.17472 ProteinModelPortal:Q5TM68 SMR:Q5TM68
            STRING:Q5TM68 PRIDE:Q5TM68 GeneID:712318 KEGG:mcc:712318
            HOGENOM:HOG000113506 InParanoid:Q5TM68 NextBio:19984480
            Uniprot:Q5TM68
        Length = 2173

 Score = 227 (85.0 bits), Expect = 9.8e-13, Sum P(2) = 9.8e-13
 Identities = 60/221 (27%), Positives = 110/221 (49%)

Query:   703 EPEPLSPLKDLRKRR---DMASIQVLFSHHLDEDIIKQQKKILDRLGASEVSSITDATHF 759
             EP  + P + LR+ +   +  + +VLF+  +D     Q ++ +  LG S   S  +A+H 
Sbjct:  1956 EPNRI-PNRSLRRTKLNQESTAPKVLFTGVVDA----QGERAVLALGGSLAGSAAEASHL 2010

Query:   760 VTDIFVRTRNMLEAIASGKPVVTHLWLESIAQVKIHIDEESYLLRDTKKEKEFGFSMPAS 819
             VTD   RT   L A+  G P+++  WL    +    +  + Y++ D ++EK FGFS+  +
Sbjct:  2011 VTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAGCFLPPDEYVVTDPEQEKNFGFSLQDA 2070

Query:   820 LARARKHPLLKDQRVLITPNIKPSKETISSLIKSVHGQAVERLGRSAXXXXXXXXXXXIL 879
             L+RAR+  LL+   + +TP ++P    +  +I    G  +  + RS            ++
Sbjct:  2071 LSRARERRLLEGYEIYVTPGVQPPPPQMGEIISCCGGTYLPSMPRS------YKPQRVVI 2124

Query:   880 SCEEDYEICEPFLEKGAAVYSSELLLNGMVTQKLEYERYYM 920
             +C +D+  C   L  G  + S E LL G++ Q+ + E + +
Sbjct:  2125 TCPQDFPRCSVPLRVGLPLLSPEFLLTGVLKQEAKPEAFVL 2165

 Score = 39 (18.8 bits), Expect = 9.8e-13, Sum P(2) = 9.8e-13
 Identities = 13/57 (22%), Positives = 18/57 (31%)

Query:   606 VKSKDFKGSKTPNHSDGKIVVDSQPSAENAEMNSRLDKSPREQCEALESPCTSPANC 662
             V   D  G  T    +G  V    P+    E +    K   + C+  E P      C
Sbjct:   651 VVDTDTPGESTQPQREGAQV----PTGREREQHVGRTKDSEDNCDDSEDPDLQATQC 703

 Score = 38 (18.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
 Identities = 10/35 (28%), Positives = 12/35 (34%)

Query:   463 TQNADHSIKKQKIAKAPSASTPIAFRTRSSKAVIQ 497
             T  A    K +   K P A  P A     S +  Q
Sbjct:  1349 TSQATRGRKNRSSVKTPEAVVPTALELHPSNSTDQ 1383

 Score = 38 (18.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
 Identities = 10/35 (28%), Positives = 12/35 (34%)

Query:   463 TQNADHSIKKQKIAKAPSASTPIAFRTRSSKAVIQ 497
             T  A    K +   K P A  P A     S +  Q
Sbjct:  1185 TSQATRGRKNRSSVKTPEAVVPTALELHPSNSTDQ 1219


>UNIPROTKB|Q7YR40 [details] [associations]
            symbol:MDC1 "Mediator of DNA damage checkpoint protein 1"
            species:9598 "Pan troglodytes" [GO:0005694 "chromosome"
            evidence=ISS] InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498
            PROSITE:PS50006 SMART:SM00240 InterPro:IPR001357 GO:GO:0005634
            GO:GO:0005694 GO:GO:0006281 Gene3D:2.60.200.20 SUPFAM:SSF49879
            EMBL:BA000041 GO:GO:0007049 eggNOG:NOG12793 SUPFAM:SSF52113
            PROSITE:PS50172 CTD:9656 HOVERGEN:HBG080567 EMBL:AB210171
            EMBL:AB210172 RefSeq:NP_001035841.1 UniGene:Ptr.6148
            ProteinModelPortal:Q7YR40 SMR:Q7YR40 STRING:Q7YR40 PRIDE:Q7YR40
            GeneID:471959 KEGG:ptr:471959 NextBio:20848814 Uniprot:Q7YR40
        Length = 2171

 Score = 228 (85.3 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
 Identities = 60/221 (27%), Positives = 111/221 (50%)

Query:   703 EPEPLSPLKDLRKRR---DMASIQVLFSHHLDEDIIKQQKKILDRLGASEVSSITDATHF 759
             EP  + P + LR+ +   +  + +VLF+  +D    + ++ +L  LG S   S  +A+H 
Sbjct:  1954 EPNRI-PSRSLRRTKLNQESTAPKVLFTGVVDA---RGERAVL-ALGGSLAGSAAEASHL 2008

Query:   760 VTDIFVRTRNMLEAIASGKPVVTHLWLESIAQVKIHIDEESYLLRDTKKEKEFGFSMPAS 819
             VTD   RT   L A+  G P+++  WL    +    +  + Y++ D ++EK FGFS+  +
Sbjct:  2009 VTDRIRRTVKFLCALGRGIPILSLDWLHQSHKAGFFLPPDEYVVTDPEQEKNFGFSLQDA 2068

Query:   820 LARARKHPLLKDQRVLITPNIKPSKETISSLIKSVHGQAVERLGRSAXXXXXXXXXXXIL 879
             L+RAR+  LL+   + +TP ++P    +  +I    G  +  + RS            ++
Sbjct:  2069 LSRARERRLLEGYEIYVTPGVQPPPPQMGEIISCCGGTYLPSMPRS------YKPQRVVI 2122

Query:   880 SCEEDYEICEPFLEKGAAVYSSELLLNGMVTQKLEYERYYM 920
             +C +D+  C   L  G  + S E LL G++ Q+ + E + +
Sbjct:  2123 TCPQDFPHCSIPLRVGLPLLSPEFLLTGVLKQEAKPEAFVL 2163

 Score = 58 (25.5 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
 Identities = 20/87 (22%), Positives = 38/87 (43%)

Query:   396 KNISEKCDRELATLNKRRAKSMDEQNSTINGSKNM-----DRVSSGIIG---QRNE-DGS 446
             K  +E+   E   L +   K + E+ + + G + +     DR    ++    QR E D +
Sbjct:   818 KETAERVGPERGPLERETEKLLPERQTDVTGEEELTKGKQDREQKQLLARDTQRQESDKN 877

Query:   447 LESCQPKEFNRCLRTETQNADHSIKKQ 473
              ES  P+     L+ E + ++   +KQ
Sbjct:   878 GESASPERDRESLKVEIETSEEIQEKQ 904

 Score = 37 (18.1 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
 Identities = 14/57 (24%), Positives = 22/57 (38%)

Query:   628 SQPSAENAEMNSRLDK-SPREQCEALESPCTSPANCITPVNAASPVCMGNGYIKQSC 683
             S P    ++   R    SPR   + L +    PA   + + AA  V  G+     +C
Sbjct:   981 SAPVTSGSQSGGRGSPVSPRRHQKGLLNCKMPPAEKASRIRAAEKVSRGDQESPDAC 1037

 Score = 37 (18.1 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
 Identities = 18/75 (24%), Positives = 30/75 (40%)

Query:    48 ETEKGLRNGNSCRVGSSTVRKLFTEDSVSQDKGLPNNGDNAAGGENLLQFPVNDDELAGL 107
             E     R G +     S   ++ TE  + +D+ L    D+      + +   N    AG+
Sbjct:   232 EASSAARRGATVEAKQSEA-EVVTEIQLEKDQPLVKERDDDT---KVKRGAENGVVPAGV 287

Query:   108 SYVDSQEPGEFSEAN 122
                 SQ PGE S+ +
Sbjct:   288 ILERSQPPGEDSDTD 302

 Score = 37 (18.1 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
 Identities = 28/135 (20%), Positives = 51/135 (37%)

Query:   370 ATRQKRKSKSGTEISRCSPD-NSVKNFKNISEKCDRELATLNKRRAKSMDEQNSTINGSK 428
             +T Q    +  ++++R   D +SVK  + +        A+ +  +  + +  + T  G K
Sbjct:  1542 STDQPVTPEPTSQVTRGRTDRSSVKTPETVVPTAPELQASASTDQPVTSEPTSRTTRGRK 1601

Query:   429 NMDRVSSG--IIGQRNE-DGSLESCQPKEFNRCLRTETQNADHSIKKQKIAKAPSASTPI 485
             N   V +   ++    E   S  + QP          T  A      +   K P +  PI
Sbjct:  1602 NRSSVKTPETVVPTAPELQPSTSTDQP-----VTPEPTSQATRGRTNRSSVKTPESIVPI 1656

Query:   486 AFRTRSSKAVIQLKT 500
             A   + S +  QL T
Sbjct:  1657 APELQPSTSRNQLVT 1671


>MGI|MGI:3525201 [details] [associations]
            symbol:Mdc1 "mediator of DNA damage checkpoint 1"
            species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005694 "chromosome" evidence=IDA] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
            evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008022
            "protein C-terminus binding" evidence=ISO] [GO:0070975 "FHA domain
            binding" evidence=ISO] InterPro:IPR000253 InterPro:IPR008984
            Pfam:PF00498 PROSITE:PS50006 SMART:SM00240 InterPro:IPR001357
            MGI:MGI:3525201 GO:GO:0005634 GO:GO:0005694 GO:GO:0006281
            GO:GO:0005925 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0007049
            eggNOG:NOG12793 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
            PDB:3VA4 PDBsum:3VA4 CTD:9656 HOVERGEN:HBG080567 OrthoDB:EOG43BMN6
            ChiTaRS:MDC1 HOGENOM:HOG000113506 EMBL:AY826432 EMBL:BC085140
            EMBL:BC094363 EMBL:AK129074 IPI:IPI01007763 RefSeq:NP_001010833.2
            UniGene:Mm.218511 PDB:3VA1 PDBsum:3VA1 ProteinModelPortal:Q5PSV9
            SMR:Q5PSV9 STRING:Q5PSV9 PhosphoSite:Q5PSV9 PaxDb:Q5PSV9
            PRIDE:Q5PSV9 GeneID:240087 KEGG:mmu:240087 UCSC:uc008cir.1
            InParanoid:Q5PSV9 NextBio:384441 Bgee:Q5PSV9 CleanEx:MM_MDC1
            Genevestigator:Q5PSV9 GermOnline:ENSMUSG00000061607 Uniprot:Q5PSV9
        Length = 1707

 Score = 221 (82.9 bits), Expect = 4.5e-12, Sum P(4) = 4.5e-12
 Identities = 60/213 (28%), Positives = 103/213 (48%)

Query:   709 PLKDLRKRRDMASI-QVLFSHHLDEDIIKQQKKILDRLGASEVSSITDATHFVTDIFVRT 767
             P +  R + +  +  +VLF+  +D    + ++ +L  LG S  SS+ +A+H VTD   RT
Sbjct:  1497 PTRSRRTKPNQETAPKVLFTGVMDS---RGERAVL-ALGGSLASSVNEASHLVTDRIRRT 1552

Query:   768 RNMLEAIASGKPVVTHLWLESIAQVKIHIDEESYLLRDTKKEKEFGFSMPASLARARKHP 827
                L A+  G P+++  WL    +    +  + YL+ D ++EK F FS+  SL RAR+  
Sbjct:  1553 VKFLCALGKGIPILSLNWLYQSRKAGCFLPPDDYLVTDPEQEKNFSFSLRDSLCRARERR 1612

Query:   828 LLKDQRVLITPNIKPSKETISSLIKSVHGQAVERLGRSAXXXXXXXXXXXILSCEEDYEI 887
             LL+D  + +TP ++P    +  +I    G  +  +  S            I++C ED   
Sbjct:  1613 LLEDYEIHVTPGVQPPPPQMGEIISCCGGTFLPSMPHS------YKLHRVIITCTEDLPR 1666

Query:   888 CEPFLEKGAAVYSSELLLNGMVTQKLEYERYYM 920
             C      G  + S E LL G++ Q+   E + +
Sbjct:  1667 CAIPSRLGLPLLSPEFLLTGVLKQEATPEAFVL 1699

 Score = 47 (21.6 bits), Expect = 4.5e-12, Sum P(4) = 4.5e-12
 Identities = 16/44 (36%), Positives = 21/44 (47%)

Query:   205 GTAYRAQRS-LTEPRQLKKRKFDLDGNGEQQDVHDGITMRSDSR 247
             GT  R  +  L    Q K+   DL+GN E  +V   I M  DS+
Sbjct:   811 GTKDREPKKVLARDSQRKEADKDLEGNRESLEVE--IEMSKDSQ 852

 Score = 44 (20.5 bits), Expect = 4.5e-12, Sum P(4) = 4.5e-12
 Identities = 26/101 (25%), Positives = 41/101 (40%)

Query:   615 KTPNHSDGKIVVDSQPSAENAEMNSRLDKSPREQCEALESPCTSPANCITPVNAASPVCM 674
             ++P  ++  +  D +P A       R  KSP +  E L S  T P     P +   PV  
Sbjct:  1103 QSPTSTEQSVTPDRKPRATRG----RPSKSPNKTPEPLIS--TGP-ELQPPTSIEQPVIP 1155

Query:   675 GNGYIKQSCRKNLAKSCLVKEINRLIATEPEPLSPLKDLRK 715
                   +  R    KS  V+    +++T PE L PL  + +
Sbjct:  1156 KP--TSRVTRGRPRKSS-VRTPESVVSTGPE-LQPLTSIEQ 1192

 Score = 41 (19.5 bits), Expect = 8.7e-11, Sum P(4) = 8.7e-11
 Identities = 14/49 (28%), Positives = 21/49 (42%)

Query:   612 KGSKTPNHSDGKIVVDSQPSAENAEMNSRLDKSPREQCEALESPCTSPA 660
             +GS +P  +   +    QP AE+A        S +E    + S   SPA
Sbjct:   550 EGSSSPEAA-ASVRPSQQPVAEDAGTECATAVSEQESTLEVRSQSGSPA 597

 Score = 39 (18.8 bits), Expect = 1.4e-10, Sum P(4) = 1.4e-10
 Identities = 11/43 (25%), Positives = 16/43 (37%)

Query:   630 PSAENAEMNSRLDKSPREQCEAL-ESPCTSPANCITPVNAASP 671
             P+    E +    KS +E C+A  E  C     C     +  P
Sbjct:   624 PTGREREAHVGRTKSAKECCDAEPEDLCLPATQCFVEGESQHP 666

 Score = 38 (18.4 bits), Expect = 4.5e-12, Sum P(4) = 4.5e-12
 Identities = 6/13 (46%), Positives = 8/13 (61%)

Query:   178 TGIYDWDDSREDE 190
             T + DWD   E+E
Sbjct:     4 TQVIDWDAEEEEE 16

 Score = 37 (18.1 bits), Expect = 1.5e-11, Sum P(5) = 1.5e-11
 Identities = 9/42 (21%), Positives = 21/42 (50%)

Query:    94 LLQFPVNDDELAGLSYVDSQEPGEFSEANALTFVEQFIEKNN 135
             LL   + D E  G++++     G  ++    T ++  +E+N+
Sbjct:   337 LLAVGIGDPEAPGVAHLQDCLAGSGTDVEDKTALDVPLERNH 378

 Score = 37 (18.1 bits), Expect = 1.5e-11, Sum P(5) = 1.5e-11
 Identities = 15/78 (19%), Positives = 27/78 (34%)

Query:    13 GQSADLSPDQDAVRNDGSEPKVVEEIDNIHDLKD--NETEKGLRNGNSCRVGSSTVRKLF 70
             G S+      D     G +P V E   ++ D      E E+   NG +  + +       
Sbjct:   211 GPSSPFGLGSDTDEEQGQQPGVEES--SLADSSGAAGEAEQPEANGTTAGIQAQPTEHKL 268

Query:    71 TEDSVSQDKGLPNNGDNA 88
              +  V ++ G     D +
Sbjct:   269 KDTKVKKEAGRAGVSDGS 286

 Score = 37 (18.1 bits), Expect = 4.2e-11, Sum P(3) = 4.2e-11
 Identities = 15/69 (21%), Positives = 28/69 (40%)

Query:   641 LDKSPREQCEALESPCTSPANCITPVNAASPVCMGNGYIKQSCRKNLAKSCLVKEINRLI 700
             ++K+PR + E+  S     A+     +  S  C+ NG    +           +E++   
Sbjct:   147 IEKTPRIRIESQNSRVLLAADSEEEGDFPSGRCVANGQRNTASPSATVVPESDEEVSSPA 206

Query:   701 ATEPEPLSP 709
              + P P SP
Sbjct:   207 PSVPGPSSP 215

 Score = 37 (18.1 bits), Expect = 4.4e-11, Sum P(4) = 4.4e-11
 Identities = 8/30 (26%), Positives = 14/30 (46%)

Query:   448 ESCQPKEFNRCLRTETQNADHSIKKQKIAK 477
             E+ QP+        + Q  +H +K  K+ K
Sbjct:   246 EAEQPEANGTTAGIQAQPTEHKLKDTKVKK 275

 Score = 37 (18.1 bits), Expect = 7.4e-11, Sum P(5) = 7.4e-11
 Identities = 11/40 (27%), Positives = 18/40 (45%)

Query:   369 VATRQKRKSKSGTEISRCSPDNSVKNFKNISEKCDRELAT 408
             + T +KRK     E+++  P  S +   N  E   + L T
Sbjct:  1478 IPTPEKRKRDHAEEVTQGKPTRSRRTKPN-QETAPKVLFT 1516


>WB|WBGene00004031 [details] [associations]
            symbol:pis-1 species:6239 "Caenorhabditis elegans"
            [GO:0040018 "positive regulation of multicellular organism growth"
            evidence=IMP] InterPro:IPR001357 Pfam:PF00533 GO:GO:0040018
            SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 EMBL:Z81122 KO:K14972
            GeneTree:ENSGT00600000084454 UniGene:Cel.7278 GeneID:177818
            KEGG:cel:CELE_T13F2.3 UCSC:T13F2.3a CTD:177818 HOGENOM:HOG000017169
            NextBio:898512 PIR:T24887 RefSeq:NP_501748.1
            ProteinModelPortal:Q9U370 SMR:Q9U370 IntAct:Q9U370 STRING:Q9U370
            PRIDE:Q9U370 EnsemblMetazoa:T13F2.3b WormBase:T13F2.3b
            InParanoid:Q9U370 OMA:MPEQPRQ ArrayExpress:Q9U370 Uniprot:Q9U370
        Length = 1076

 Score = 207 (77.9 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
 Identities = 58/213 (27%), Positives = 100/213 (46%)

Query:   706 PLSPLKDLRKRRDMASIQVLFSHHLDEDIIKQQKKILDRLGASEVSSITDATHFVTDIFV 765
             PLS  +  R R   A +   F   +D++ +   KK L+ LG   V  I DATH +     
Sbjct:   815 PLSK-EFYRVREPQARVSAWFGEGIDDEALTILKKKLEFLGGECVEKIRDATHVILISGR 873

Query:   766 RTRNMLEAIASGKPVVTHLWLESIAQVKIHIDEESYLLRDTKKEKEFGFSMPASLARARK 825
             R+  +LE+I  GK ++   W+    + K+ +D   Y L D + EKEF ++   S+ RAR 
Sbjct:   874 RSLVLLESIIRGKNIMDPEWIVDSYKQKMWLDTLDYFLHDKELEKEFAYNCKRSVLRARN 933

Query:   826 HPLLKDQRVLITPNIKPSKETISSLIK----SVHGQAVERLGRSAXXXXXXXXXXXILSC 881
              P+ +D    +T  ++P++  +  LI+    +VH +  +   +             I+SC
Sbjct:   934 KPVFEDIEFHVTRFVEPNQNDLVRLIELGGGNVHSEKPDP--KYLAKCVETEQPFIIISC 991

Query:   882 EEDYEICEPFLEKGAAVYSSELLLNGMVTQKLE 914
             E D             +Y+ +L+L  M+ Q++E
Sbjct:   992 ENDARFLSYLAGSKLPIYNVDLVLFAMLRQQIE 1024

 Score = 42 (19.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
 Identities = 15/56 (26%), Positives = 21/56 (37%)

Query:   616 TPNHSDGKIVVDSQPSAENAEMNSRLDKSPREQCEALESPCTSPANCITPVNAASP 671
             TPNH  G      Q    + E  +    +P       +S     +NC TP +A  P
Sbjct:    94 TPNHQMGNPPQHQQQQFFHGESPAHSQGTPMTP----QSAGMPGSNCGTPQSAGGP 145

 Score = 41 (19.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
 Identities = 14/47 (29%), Positives = 21/47 (44%)

Query:   628 SQPSAENAEMNSRLDKSPREQCEAL---ESPCTSPANCITPVNAASP 671
             SQ S+     N ++   P+ Q +     ESP  S    +TP +A  P
Sbjct:    87 SQRSSTGTP-NHQMGNPPQHQQQQFFHGESPAHSQGTPMTPQSAGMP 132


>TAIR|locus:2060535 [details] [associations]
            symbol:AT2G41450 species:3702 "Arabidopsis thaliana"
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008080 "N-acetyltransferase activity"
            evidence=IEA;ISS] InterPro:IPR000182 Pfam:PF00583 PROSITE:PS51186
            InterPro:IPR001357 Pfam:PF00533 EMBL:CP002685
            GenomeReviews:CT485783_GR Gene3D:3.40.630.30 InterPro:IPR016181
            SUPFAM:SSF55729 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
            GO:GO:0008080 EMBL:AC004625 eggNOG:NOG310206 IPI:IPI00533317
            RefSeq:NP_181676.2 UniGene:At.42829 ProteinModelPortal:B3H6L5
            SMR:B3H6L5 STRING:B3H6L5 EnsemblPlants:AT2G41450.1 GeneID:818743
            KEGG:ath:AT2G41450 TAIR:At2g41450 HOGENOM:HOG000064676 OMA:FWLKQGF
            PhylomeDB:B3H6L5 ProtClustDB:CLSN2708481 Genevestigator:B3H6L5
            Uniprot:B3H6L5
        Length = 612

 Score = 180 (68.4 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 53/208 (25%), Positives = 101/208 (48%)

Query:   712 DLRKRRDMASIQVLFSHHLDEDIIKQQKKILDRLGASEVSSITDATHFVTDIFVRTRNML 771
             D+  R +    ++L     DE+      +++ +LG +     T +TH VT    +T N+ 
Sbjct:   403 DMEARPNGQHYRILLMDICDENKRAWLTEVIRKLGGTVTLDGTTSTHIVTGKVRKTLNLC 462

Query:   772 EAIASGKPVVTHLWL-ESIAQVKIHIDEESYLLRDTKKEKEFGFSMPASLARARKHP--L 828
              A+ SG  +V+  WL ES+ + +   +E S++L D   + ++   + +++ RA+  P  L
Sbjct:   463 TALCSGAWIVSPSWLKESVREGRF-ANEASHILHDEDYQLKYDTDLKSTVLRAKARPNSL 521

Query:   829 LKDQRVLITPNIKPSKETISSLIKSVHGQAVERLGRSAXXXXXXXXXXXILSCEEDYEIC 888
             LK   + + PNI+   +T S++IKS  G  +  + +              + CEED    
Sbjct:   522 LKGYDICVGPNIELPIKTSSAIIKSAGGNVISGVNK-----VKEASKAIYIGCEEDTVGA 576

Query:   889 EPFLEKGAAVYSSELLLNGMVTQKLEYE 916
                 +KG   +SSE  +N ++ Q+L+ +
Sbjct:   577 LFAAKKGIWTFSSEWFMNCVMKQQLDLQ 604


>POMBASE|SPBC582.05c [details] [associations]
            symbol:brc1 "BRCT domain protein Brc1" species:4896
            "Schizosaccharomyces pombe" [GO:0000018 "regulation of DNA
            recombination" evidence=IMP] [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0006301
            "postreplication repair" evidence=IMP] [GO:0051276 "chromosome
            organization" evidence=IGI] InterPro:IPR001357 PomBase:SPBC582.05c
            Pfam:PF00533 GO:GO:0005634 GO:GO:0051301 GO:GO:0007067
            EMBL:CU329671 GenomeReviews:CU329671_GR SMART:SM00292
            SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0051276 PIR:T37978
            RefSeq:NP_595173.1 PDB:3L40 PDB:3L41 PDBsum:3L40 PDBsum:3L41
            ProteinModelPortal:Q10337 STRING:Q10337 EnsemblFungi:SPBC582.05c.1
            GeneID:2541071 KEGG:spo:SPBC582.05c eggNOG:NOG310206 OMA:DNTHLIT
            OrthoDB:EOG4MGWGQ EvolutionaryTrace:Q10337 NextBio:20802185
            GO:GO:0006301 GO:GO:0000018 Uniprot:Q10337
        Length = 878

 Score = 165 (63.1 bits), Expect = 3.0e-08, P = 3.0e-08
 Identities = 74/292 (25%), Positives = 124/292 (42%)

Query:   615 KTPNHSDGKIVVDSQPSA--ENAEMNSRLDK-SPREQCEALESPCTSPANCITPV-NAAS 670
             K+P     K+VV S      +  ++   LD+ +P    + L S   S A  ++ + N   
Sbjct:   566 KSPLSLTPKVVVPSHKETYTDEKKLIDELDRVNPLNSSQLLRSKRKSAATALSMLQNVIM 625

Query:   671 PVCMGNGYIKQSCRKNLAKSCLVKEINRLIATEPEPLSPLKDLRKRRDMASIQVLFSHHL 730
             P  +   + ++  R+   +S    E++R      E  +      KR     + + F+ + 
Sbjct:   626 PDVLA--FEREKKRRQTHRSVSSGEVSR---ESSESRNTNAKASKR-----VYITFTGYD 675

Query:   731 DEDIIKQQKKILDRLGASEVSSITDATHFVTDIFVRTRNMLEAIASGKPVVTHLWLESIA 790
              +  I   KK    L  S  S+ +  TH +    +RT   L +I  G  VVT  W+ S  
Sbjct:   676 KKPSIDNLKK----LDMSITSNPSKCTHLIAPRILRTSKFLCSIPYGPCVVTMDWINSCL 731

Query:   791 QVKIHIDEESYLLRDTKKEKEFGFSMPASLARARKH-P-LLKDQRVLITPN-IKPSK-ET 846
             +    +DEE YLL D +KE E G ++ ++L RAR   P LL+D  V +T   + P     
Sbjct:   732 KTHEIVDEEPYLLNDPEKELELGCTLESALKRARAQGPSLLEDYVVYLTSKTVAPENVPA 791

Query:   847 ISSLIKSVHGQAVERLG--RSAXXXXXXXXXXXILSCEEDYEICEPFLEKGA 896
             + S++KS +G     L                 +++C ED  I   FL+  +
Sbjct:   792 VISIVKS-NGGVCSTLNVYNKRLARHLEDGNVVLITCNEDSHIWTNFLDNAS 842


>FB|FBgn0052133 [details] [associations]
            symbol:ptip species:7227 "Drosophila melanogaster"
            [GO:0008134 "transcription factor binding" evidence=ISS]
            [GO:0007448 "anterior/posterior pattern specification, imaginal
            disc" evidence=IMP] [GO:0016571 "histone methylation" evidence=IMP]
            [GO:0009880 "embryonic pattern specification" evidence=IMP]
            [GO:0002805 "regulation of antimicrobial peptide biosynthetic
            process" evidence=IMP] [GO:0044666 "MLL3/4 complex" evidence=IDA]
            [GO:0051568 "histone H3-K4 methylation" evidence=IDA]
            InterPro:IPR001357 Pfam:PF00533 EMBL:AE014296
            GeneTree:ENSGT00700000104720 GO:GO:0009880 SMART:SM00292
            SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0051568 GO:GO:0002805
            eggNOG:NOG310206 GO:GO:0044666 GO:GO:0007448 KO:K14972
            RefSeq:NP_729947.2 UniGene:Dm.24000 ProteinModelPortal:Q9VUB7
            SMR:Q9VUB7 IntAct:Q9VUB7 MINT:MINT-1742539 STRING:Q9VUB7
            PaxDb:Q9VUB7 EnsemblMetazoa:FBtr0075784 GeneID:39552
            KEGG:dme:Dmel_CG32133 UCSC:CG32133-RA CTD:39552 FlyBase:FBgn0052133
            InParanoid:Q9VUB7 OMA:DSLIMRQ OrthoDB:EOG41G1K5 PhylomeDB:Q9VUB7
            GenomeRNAi:39552 NextBio:814237 ArrayExpress:Q9VUB7 Bgee:Q9VUB7
            Uniprot:Q9VUB7
        Length = 2294

 Score = 151 (58.2 bits), Expect = 3.0e-06, P = 3.0e-06
 Identities = 49/200 (24%), Positives = 89/200 (44%)

Query:   723 QVLFSHHLDEDIIKQQKKILDRLGASEVSSITDATHFVTDIFVRTRNMLEAIASGKPVVT 782
             +V+FS   D + +K  K +L  LG   V S  DATH V     RT  +++A      V+ 
Sbjct:  2077 KVIFSQVADAEALK--KAVLI-LGGIVVDSPADATHLVMTRESRTCKLIQACCHVDYVLK 2133

Query:   783 HLWLESIAQVKIHIDEESYLLRDTKKEKEFGFSMPASLARARKHPLLKDQRVLITPNIKP 842
               W+   A+    +  + Y ++    ++   F++   L    +  L   +   +TP++ P
Sbjct:  2134 SSWIADSAKAGKFVPTDPYRIQHIPVDENLQFNLNTVLCAPTRSTLFAGKYFHVTPDVFP 2193

Query:   843 SKETISSLIKSVHGQAV--ERLGRS-AXXXXXXXXXXXILSCEEDYEICEPFLEKG---A 896
             ++E I  +I+S  G+     R G S A           I++C  D  +C      G    
Sbjct:  2194 AREEIIRMIESSGGKVEPKRRSGASVAETHMQAPDSYIIVTCPTDMHLCADLTRHGNPKC 2253

Query:   897 AVYSSELLLNGMVTQKLEYE 916
              + S+E +++ ++ Q+LE E
Sbjct:  2254 HIVSTEFVMSSILRQQLEIE 2273


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.129   0.361    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      930       847   0.00082  122 3  11 23  0.47    34
                                                     37  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  24
  No. of states in DFA:  617 (66 KB)
  Total size of DFA:  380 KB (2186 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  76.67u 0.12s 76.79t   Elapsed:  00:00:04
  Total cpu time:  76.67u 0.12s 76.79t   Elapsed:  00:00:04
  Start:  Mon May 20 16:40:14 2013   End:  Mon May 20 16:40:18 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with AT3G21480 AT3G21480 AT3G21480	protein from Arabidopsis thaliana	1.3e-112
BLAST match view associations BLAST with AT4G03130 AT4G03130 AT4G03130	protein from Arabidopsis thaliana	2.0e-73
BLAST match view associations BLAST with paxip1 paxip1 paxip1 PAX interacting (with transcription-activation domain) protein 1	gene_product from Danio rerio	5.7e-20
BLAST match view associations BLAST with PAXIP1 PAXIP1 PAXIP1 PAX-interacting protein 1	protein from Bos taurus	3.0e-18
BLAST match view associations BLAST with PAXIP1 PAXIP1 PAXIP1 PAX-interacting protein 1	protein from Bos taurus	5.4e-18
BLAST match view associations BLAST with PAXIP1 PAXIP1 PAXIP1 PAX-interacting protein 1	protein from Homo sapiens	8.3e-18
BLAST match view associations BLAST with Paxip1 Paxip1 Paxip1 PAX interacting (with transcription-activation domain) protein 1	gene from Rattus norvegicus	8.4e-18
BLAST match view associations BLAST with Paxip1 Paxip1 Paxip1 PAX interacting (with transcription-activation domain) protein 1	protein from Mus musculus	7.4e-17
BLAST match view associations BLAST with im:7163673 im:7163673 im:7163673	gene_product from Danio rerio	3.7e-16
BLAST match view associations BLAST with Mdc1 Mdc1 Mdc1 mediator of DNA damage checkpoint 1	gene from Rattus norvegicus	8.1e-14
BLAST match view associations BLAST with Mdc1 Mdc1 Mdc1 Mediator of DNA damage checkpoint protein 1	protein from Rattus norvegicus	8.1e-14
BLAST match view associations BLAST with MDC1 MDC1 MDC1 Mediator of DNA damage checkpoint protein 1	protein from Sus scrofa	1.1e-13
BLAST match view associations BLAST with MDC1 MDC1 MDC1 Mediator of DNA damage checkpoint protein 1	protein from Sus scrofa	1.1e-13
BLAST match view associations BLAST with MDC1 MDC1 MDC1 Mediator of DNA damage checkpoint protein 1	protein from Homo sapiens	2.6e-13
BLAST match view associations BLAST with MDC1 MDC1 MDC1 Uncharacterized protein	protein from Bos taurus	2.9e-13
BLAST match view associations BLAST with MDC1 MDC1 MDC1 Mediator of DNA damage checkpoint protein 1	protein from Macaca mulatta	9.8e-13
BLAST match view associations BLAST with MDC1 MDC1 MDC1 Mediator of DNA damage checkpoint protein 1	protein from Pan troglodytes	1.2e-12
BLAST match view associations BLAST with Mdc1 Mdc1 Mdc1 mediator of DNA damage checkpoint 1	protein from Mus musculus	4.5e-12
BLAST match view associations BLAST with pis-1 pis-1 pis-1	gene from Caenorhabditis elegans	1.2e-11
BLAST match view associations BLAST with AT2G41450 AT2G41450 AT2G41450	protein from Arabidopsis thaliana	4.1e-10
BLAST match view associations BLAST with ptip ptip ptip	protein from Drosophila melanogaster	3.0e-06