BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002376
(929 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 177/567 (31%), Positives = 265/567 (46%), Gaps = 66/567 (11%)
Query: 89 PHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKML 148
P +G+ S L+ + + NKLSG+ R I L++LNIS N G +P L L+ L
Sbjct: 214 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYL 271
Query: 149 DLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPP----------------SIANLI 192
L NK TG + D +L L+ N +G++PP + + +
Sbjct: 272 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGEL 331
Query: 193 PSD-LSRLENLKVLDLTINRLAGTVPSTIYNMT-SLVHLRLASNQLGGEIPYDVRDTLPN 250
P D L ++ LKVLDL+ N +G +P ++ N++ SL+ L L+SN G I ++ N
Sbjct: 332 PMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKN 391
Query: 251 LLDFIYCFNR-FTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKI 309
L +Y N FTGKIP +L N + + + ++ N L GT+P LG+L LR + N +
Sbjct: 392 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNML 451
Query: 310 VSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKI 369
E L ++ +L L LD N G+IP + N +N L+ + L N + G+I
Sbjct: 452 EGEIPQE-LMYVKTLET------LILDFNDLTGEIPSGLSNCTN-LNWISLSNNRLTGEI 503
Query: 370 PASIGRLRSLTLLDLSYNSISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQ 429
P IGRL +L +L LS NS SG IP E+ N G IP ++ K+ +
Sbjct: 504 PKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM--FKQSGK 561
Query: 430 IDLSGNELTGEIPISFGN---------------FQSLLSIDLSNNRINGNIPKGILRPL- 473
I + N + G+ + N FQ + S L NR++ P I +
Sbjct: 562 I--AANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQL--NRLSTRNPCNITSRVY 617
Query: 474 ----PEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELK 529
+++ +D+S N LSG +P + + L L + +N SG IP+ V +L+
Sbjct: 618 GGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLR 677
Query: 530 GLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVHLKGNPKL 589
GL +LDLSSNKL G IP + L L ++L+ NNL G +P G F NP L
Sbjct: 678 GLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGL 737
Query: 590 C-----------LQLGCENPRSHGSRL 605
C + RSHG RL
Sbjct: 738 CGYPLPRCDPSNADGYAHHQRSHGRRL 764
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 161/542 (29%), Positives = 239/542 (44%), Gaps = 100/542 (18%)
Query: 93 NLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMA 152
NL FL + +N S +P +G+ L+ L+IS N L G+ IS TELK+L++ +
Sbjct: 198 NLEFL---DVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISS 253
Query: 153 NKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRL 212
N+ G + L+SLQ L+ +N G IP ++ + L LDL+ N
Sbjct: 254 NQFVGPIPP---LPLKSLQYLSLAENKFTGEIPDFLS-------GACDTLTGLDLSGNHF 303
Query: 213 AGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNL 272
G VP + + L L L+SN GE+P D + L FN F+G++P SL NL
Sbjct: 304 YGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNL 363
Query: 273 T-NIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLN 331
+ ++ + ++ N G + P L P L
Sbjct: 364 SASLLTLDLSSNNFSGPILPNLCQNP-----------------------------KNTLQ 394
Query: 332 YLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISG 391
L L N F GKIP ++ N S EL L+L N++ G IP+S+G L L L L N + G
Sbjct: 395 ELYLQNNGFTGKIPPTLSNCS-ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEG 453
Query: 392 EIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSL 451
EIP E+ N++ G IP+ L+N LN I LS N LTGEIP G ++L
Sbjct: 454 EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENL 513
Query: 452 LSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSL---------- 501
+ LSNN +GNIP E+ +++ +DL+ N +G +P ++
Sbjct: 514 AILKLSNNSFSGNIPA--------ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 565
Query: 502 ----------------KNCKSLEELL-------MAYNQFSGPIP-NIVAELKG------- 530
K C LL N+ S P NI + + G
Sbjct: 566 FIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF 625
Query: 531 -----LEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSE-GIFRNMSNVHLK 584
+ LD+S N LSG IP ++ ++ L LNL N++ G +P E G R ++ + L
Sbjct: 626 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLS 685
Query: 585 GN 586
N
Sbjct: 686 SN 687
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 136/448 (30%), Positives = 211/448 (47%), Gaps = 70/448 (15%)
Query: 71 NRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFR-LRVLNISFN 129
+ + GL+LS G + P G+ S L S+ L +N SG LP + R L+VL++SFN
Sbjct: 291 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFN 350
Query: 130 NLQGELPVNISKLT-ELKMLDLMANKITGRVTDDQLRNLR-SLQVLNFGKNLLWGSIPPS 187
GELP +++ L+ L LDL +N +G + + +N + +LQ L N G IPP+
Sbjct: 351 EFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPT 410
Query: 188 IANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDT 247
++N L L L+ N L+GT+PS++ +++ L L+L N L GEIP ++
Sbjct: 411 LSN--------CSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM-Y 461
Query: 248 LPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLG---NLPFLRTYNI 304
+ L I FN TG+IP L N TN+ I +++N L G +P +G NL L+ N
Sbjct: 462 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN 521
Query: 305 GFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGN- 363
F+ + + L + L +L L+ N F G IP ++ S +++ ++ G
Sbjct: 522 SFSGNIPA----------ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKR 571
Query: 364 HIY--------------------------------------------GKIPASIGRLRSL 379
++Y G + S+
Sbjct: 572 YVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSM 631
Query: 380 TLLDLSYNSISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGNELTG 439
LD+SYN +SG IP EI N+I G IP+ + +L+ LN +DLS N+L G
Sbjct: 632 MFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDG 691
Query: 440 EIPISFGNFQSLLSIDLSNNRINGNIPK 467
IP + L IDLSNN ++G IP+
Sbjct: 692 RIPQAMSALTMLTEIDLSNNNLSGPIPE 719
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 160/488 (32%), Positives = 218/488 (44%), Gaps = 80/488 (16%)
Query: 97 LRSIQLQNNKLSGNLPR--EIGNLFRLRVLNISFNNLQGELPVNIS---KLTELKMLDLM 151
L S+ L N LSG + +G+ L+ LN+S N L + P +S KL L++LDL
Sbjct: 99 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--DFPGKVSGGLKLNSLEVLDLS 156
Query: 152 ANKITGR-----VTDDQLRNLRSLQVLNFGKNLLWGSIPPS-IANLIPSDLSR------- 198
AN I+G V D L+ L + N + G + S NL D+S
Sbjct: 157 ANSISGANVVGWVLSDGCGELKHLAI---SGNKISGDVDVSRCVNLEFLDVSSNNFSTGI 213
Query: 199 -----LENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLD 253
L+ LD++ N+L+G I T L L ++SNQ G IP L +L
Sbjct: 214 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP---PLPLKSLQY 270
Query: 254 FIYCFNRFTGKIP----GSLHNLTNIQIIRMTHNLLEGTLPPGL---------------- 293
N+FTG+IP G+ LT + ++ N G +PP
Sbjct: 271 LSLAENKFTGEIPDFLSGACDTLTGLD---LSGNHFYGAVPPFFGSCSLLESLALSSNNF 327
Query: 294 -GNLPF--------LRTYNIGFNKIVSSGDDEGLSFITSLTN-STHLNYLALDGNQFEGK 343
G LP L+ ++ FN+ SG+ SLTN S L L L N F G
Sbjct: 328 SGELPMDTLLKMRGLKVLDLSFNEF--SGE-----LPESLTNLSASLLTLDLSSNNFSGP 380
Query: 344 I-PESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIXXXXX 402
I P N N L +LYL N GKIP ++ L L LS+N +SG IP +
Sbjct: 381 ILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSK 440
Query: 403 XXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRIN 462
N + G IP L +K L + L N+LTGEIP N +L I LSNNR+
Sbjct: 441 LRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLT 500
Query: 463 GNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIP 522
G IPK I RLEN+ + LS+NS SGN+P L +C+SL L + N F+G IP
Sbjct: 501 GEIPK--------WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Query: 523 NIVAELKG 530
+ + G
Sbjct: 553 AAMFKQSG 560
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 163/375 (43%), Gaps = 86/375 (22%)
Query: 65 ICNNFGNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVL 124
+C N N + L L + G G I P + N S L S+ L N LSG +P +G+L +LR L
Sbjct: 385 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 444
Query: 125 NISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSI 184
+ N L+GE+P + + L+ L L N +TG + L N +L ++ N L G I
Sbjct: 445 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG-LSNCTNLNWISLSNNRLTGEI 503
Query: 185 PPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIP--- 241
P I RLENL +L L+ N +G +P+ + + SL+ L L +N G IP
Sbjct: 504 PKWIG--------RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 555
Query: 242 ------------------YDVRDTLP-------NLLDFIYC----FNRFTGKIPG----- 267
Y D + NLL+F NR + + P
Sbjct: 556 FKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSR 615
Query: 268 --------SLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLS 319
+ N ++ + M++N+L G +P +G++P+L N+G N I
Sbjct: 616 VYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDI---------- 665
Query: 320 FITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSL 379
G IP+ +G+ L+ L L N + G+IP ++ L L
Sbjct: 666 ---------------------SGSIPDEVGDLRG-LNILDLSSNKLDGRIPQAMSALTML 703
Query: 380 TLLDLSYNSISGEIP 394
T +DLS N++SG IP
Sbjct: 704 TEIDLSNNNLSGPIP 718
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 64/255 (25%)
Query: 367 GKIPASIGRLRSLTLLDLSYNSISG-------------------------EIPIEIXXXX 401
GK+ + +L SL +LDLS NSISG +++
Sbjct: 139 GKVSGGL-KLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCV 197
Query: 402 XXXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRI 461
N GIP L + L +D+SGN+L+G+ + L +++S+N+
Sbjct: 198 NLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 256
Query: 462 NGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKN-CKSLEELLMAYNQFSGP 520
G IP PLP L+++ + L++N +G +P+ L C +L L ++ N F G
Sbjct: 257 VGPIP-----PLP-----LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGA 306
Query: 521 IP-------------------------NIVAELKGLEVLDLSSNKLSGSIPSDLQNLQA- 554
+P + + +++GL+VLDLS N+ SG +P L NL A
Sbjct: 307 VPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSAS 366
Query: 555 LRSLNLTFNNLEGVV 569
L +L+L+ NN G +
Sbjct: 367 LLTLDLSSNNFSGPI 381
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 14/93 (15%)
Query: 456 LSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPN--SLKNCKSLEELLMA 513
LSN+ ING++ ++ ++DLS NSLSG + SL +C L+ L ++
Sbjct: 81 LSNSHINGSV---------SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVS 131
Query: 514 YN--QFSGPIPNIVAELKGLEVLDLSSNKLSGS 544
N F G + + +L LEVLDLS+N +SG+
Sbjct: 132 SNTLDFPGKVSGGL-KLNSLEVLDLSANSISGA 163
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 171/541 (31%), Positives = 258/541 (47%), Gaps = 55/541 (10%)
Query: 89 PHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKML 148
P +G+ S L+ + + NKLSG+ R I L++LNIS N G +P L L+ L
Sbjct: 217 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYL 274
Query: 149 DLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPP----------------SIANLI 192
L NK TG + D +L L+ N +G++PP + + +
Sbjct: 275 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGEL 334
Query: 193 PSD-LSRLENLKVLDLTINRLAGTVPSTIYNMT-SLVHLRLASNQLGGEIPYDVRDTLPN 250
P D L ++ LKVLDL+ N +G +P ++ N++ SL+ L L+SN G I ++ N
Sbjct: 335 PMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKN 394
Query: 251 LLDFIYCFNR-FTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKI 309
L +Y N FTGKIP +L N + + + ++ N L GT+P LG+L LR + N +
Sbjct: 395 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNML 454
Query: 310 VSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKI 369
E L ++ +L L LD N G+IP + N +N L+ + L N + G+I
Sbjct: 455 EGEIPQE-LMYVKTLET------LILDFNDLTGEIPSGLSNCTN-LNWISLSNNRLTGEI 506
Query: 370 PASIGRLRSLTLLDLSYNSISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQ 429
P IGRL +L +L LS NS SG IP E+ N G IP ++ K+ +
Sbjct: 507 PKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM--FKQSGK 564
Query: 430 IDLSGNELTGEIPISFGN---------------FQSLLSIDLSNNRINGNIPKGILRPL- 473
I + N + G+ + N FQ + S L NR++ P I +
Sbjct: 565 I--AANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQL--NRLSTRNPCNITSRVY 620
Query: 474 ----PEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELK 529
+++ +D+S N LSG +P + + L L + +N SG IP+ V +L+
Sbjct: 621 GGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLR 680
Query: 530 GLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVHLKGNPKL 589
GL +LDLSSNKL G IP + L L ++L+ NNL G +P G F NP L
Sbjct: 681 GLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGL 740
Query: 590 C 590
C
Sbjct: 741 C 741
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 161/542 (29%), Positives = 239/542 (44%), Gaps = 100/542 (18%)
Query: 93 NLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMA 152
NL FL + +N S +P +G+ L+ L+IS N L G+ IS TELK+L++ +
Sbjct: 201 NLEFL---DVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISS 256
Query: 153 NKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRL 212
N+ G + L+SLQ L+ +N G IP ++ + L LDL+ N
Sbjct: 257 NQFVGPIPP---LPLKSLQYLSLAENKFTGEIPDFLS-------GACDTLTGLDLSGNHF 306
Query: 213 AGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNL 272
G VP + + L L L+SN GE+P D + L FN F+G++P SL NL
Sbjct: 307 YGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNL 366
Query: 273 T-NIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLN 331
+ ++ + ++ N G + P L P L
Sbjct: 367 SASLLTLDLSSNNFSGPILPNLCQNP-----------------------------KNTLQ 397
Query: 332 YLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISG 391
L L N F GKIP ++ N S EL L+L N++ G IP+S+G L L L L N + G
Sbjct: 398 ELYLQNNGFTGKIPPTLSNCS-ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEG 456
Query: 392 EIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSL 451
EIP E+ N++ G IP+ L+N LN I LS N LTGEIP G ++L
Sbjct: 457 EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENL 516
Query: 452 LSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSL---------- 501
+ LSNN +GNIP E+ +++ +DL+ N +G +P ++
Sbjct: 517 AILKLSNNSFSGNIPA--------ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 568
Query: 502 ----------------KNCKSLEELL-------MAYNQFSGPIP-NIVAELKG------- 530
K C LL N+ S P NI + + G
Sbjct: 569 FIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF 628
Query: 531 -----LEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSE-GIFRNMSNVHLK 584
+ LD+S N LSG IP ++ ++ L LNL N++ G +P E G R ++ + L
Sbjct: 629 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLS 688
Query: 585 GN 586
N
Sbjct: 689 SN 690
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 136/448 (30%), Positives = 211/448 (47%), Gaps = 70/448 (15%)
Query: 71 NRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFR-LRVLNISFN 129
+ + GL+LS G + P G+ S L S+ L +N SG LP + R L+VL++SFN
Sbjct: 294 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFN 353
Query: 130 NLQGELPVNISKLT-ELKMLDLMANKITGRVTDDQLRNLR-SLQVLNFGKNLLWGSIPPS 187
GELP +++ L+ L LDL +N +G + + +N + +LQ L N G IPP+
Sbjct: 354 EFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPT 413
Query: 188 IANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDT 247
++N L L L+ N L+GT+PS++ +++ L L+L N L GEIP ++
Sbjct: 414 LSN--------CSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM-Y 464
Query: 248 LPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLG---NLPFLRTYNI 304
+ L I FN TG+IP L N TN+ I +++N L G +P +G NL L+ N
Sbjct: 465 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN 524
Query: 305 GFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGN- 363
F+ + + L + L +L L+ N F G IP ++ S +++ ++ G
Sbjct: 525 SFSGNIPA----------ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKR 574
Query: 364 HIY--------------------------------------------GKIPASIGRLRSL 379
++Y G + S+
Sbjct: 575 YVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSM 634
Query: 380 TLLDLSYNSISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGNELTG 439
LD+SYN +SG IP EI N+I G IP+ + +L+ LN +DLS N+L G
Sbjct: 635 MFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDG 694
Query: 440 EIPISFGNFQSLLSIDLSNNRINGNIPK 467
IP + L IDLSNN ++G IP+
Sbjct: 695 RIPQAMSALTMLTEIDLSNNNLSGPIPE 722
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 160/488 (32%), Positives = 218/488 (44%), Gaps = 80/488 (16%)
Query: 97 LRSIQLQNNKLSGNLPR--EIGNLFRLRVLNISFNNLQGELPVNIS---KLTELKMLDLM 151
L S+ L N LSG + +G+ L+ LN+S N L + P +S KL L++LDL
Sbjct: 102 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--DFPGKVSGGLKLNSLEVLDLS 159
Query: 152 ANKITGR-----VTDDQLRNLRSLQVLNFGKNLLWGSIPPS-IANLIPSDLSR------- 198
AN I+G V D L+ L + N + G + S NL D+S
Sbjct: 160 ANSISGANVVGWVLSDGCGELKHLAI---SGNKISGDVDVSRCVNLEFLDVSSNNFSTGI 216
Query: 199 -----LENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLD 253
L+ LD++ N+L+G I T L L ++SNQ G IP L +L
Sbjct: 217 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP---PLPLKSLQY 273
Query: 254 FIYCFNRFTGKIP----GSLHNLTNIQIIRMTHNLLEGTLPPGL---------------- 293
N+FTG+IP G+ LT + ++ N G +PP
Sbjct: 274 LSLAENKFTGEIPDFLSGACDTLTGLD---LSGNHFYGAVPPFFGSCSLLESLALSSNNF 330
Query: 294 -GNLPF--------LRTYNIGFNKIVSSGDDEGLSFITSLTN-STHLNYLALDGNQFEGK 343
G LP L+ ++ FN+ SG+ SLTN S L L L N F G
Sbjct: 331 SGELPMDTLLKMRGLKVLDLSFNEF--SGE-----LPESLTNLSASLLTLDLSSNNFSGP 383
Query: 344 I-PESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIXXXXX 402
I P N N L +LYL N GKIP ++ L L LS+N +SG IP +
Sbjct: 384 ILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSK 443
Query: 403 XXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRIN 462
N + G IP L +K L + L N+LTGEIP N +L I LSNNR+
Sbjct: 444 LRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLT 503
Query: 463 GNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIP 522
G IPK I RLEN+ + LS+NS SGN+P L +C+SL L + N F+G IP
Sbjct: 504 GEIPK--------WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Query: 523 NIVAELKG 530
+ + G
Sbjct: 556 AAMFKQSG 563
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 163/375 (43%), Gaps = 86/375 (22%)
Query: 65 ICNNFGNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVL 124
+C N N + L L + G G I P + N S L S+ L N LSG +P +G+L +LR L
Sbjct: 388 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 447
Query: 125 NISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSI 184
+ N L+GE+P + + L+ L L N +TG + L N +L ++ N L G I
Sbjct: 448 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIP-SGLSNCTNLNWISLSNNRLTGEI 506
Query: 185 PPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIP--- 241
P I RLENL +L L+ N +G +P+ + + SL+ L L +N G IP
Sbjct: 507 PKWIG--------RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Query: 242 ------------------YDVRDTLP-------NLLDFIYC----FNRFTGKIPG----- 267
Y D + NLL+F NR + + P
Sbjct: 559 FKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSR 618
Query: 268 --------SLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLS 319
+ N ++ + M++N+L G +P +G++P+L N+G N I
Sbjct: 619 VYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDI---------- 668
Query: 320 FITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSL 379
G IP+ +G+ L+ L L N + G+IP ++ L L
Sbjct: 669 ---------------------SGSIPDEVGDLRG-LNILDLSSNKLDGRIPQAMSALTML 706
Query: 380 TLLDLSYNSISGEIP 394
T +DLS N++SG IP
Sbjct: 707 TEIDLSNNNLSGPIP 721
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 64/255 (25%)
Query: 367 GKIPASIGRLRSLTLLDLSYNSISG-------------------------EIPIEIXXXX 401
GK+ + +L SL +LDLS NSISG +++
Sbjct: 142 GKVSGGL-KLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCV 200
Query: 402 XXXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRI 461
N GIP L + L +D+SGN+L+G+ + L +++S+N+
Sbjct: 201 NLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 259
Query: 462 NGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKN-CKSLEELLMAYNQFSGP 520
G IP PLP L+++ + L++N +G +P+ L C +L L ++ N F G
Sbjct: 260 VGPIP-----PLP-----LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGA 309
Query: 521 IP-------------------------NIVAELKGLEVLDLSSNKLSGSIPSDLQNLQA- 554
+P + + +++GL+VLDLS N+ SG +P L NL A
Sbjct: 310 VPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSAS 369
Query: 555 LRSLNLTFNNLEGVV 569
L +L+L+ NN G +
Sbjct: 370 LLTLDLSSNNFSGPI 384
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 14/93 (15%)
Query: 456 LSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPN--SLKNCKSLEELLMA 513
LSN+ ING++ ++ ++DLS NSLSG + SL +C L+ L ++
Sbjct: 84 LSNSHINGSV---------SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVS 134
Query: 514 YN--QFSGPIPNIVAELKGLEVLDLSSNKLSGS 544
N F G + + +L LEVLDLS+N +SG+
Sbjct: 135 SNTLDFPGKVSGGL-KLNSLEVLDLSANSISGA 166
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 133/311 (42%), Gaps = 71/311 (22%)
Query: 650 KISYDELRRATGNFSHENLIGSGSFGSV---------------LHNER-TGSWKSFIAEC 693
+ S EL+ A+ NFS++N++G G FG V L ER G F E
Sbjct: 27 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEV 86
Query: 694 ETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLG-------------DWIHG 740
E + HRNL++L C + + LVY +++NGS+ DW
Sbjct: 87 EMISMAVHRNLLRLRGFCMTPTER-----LLVYPYMANGSVASCLRERPESQPPLDWPKR 141
Query: 741 ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQS 800
+R L L YLH+ C+ ++H D+K NILLDEE A VGDFGLA+ + +
Sbjct: 142 QRIA-LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-----DYK 195
Query: 801 SISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTS-----ESFAGE--FNIVK-------- 845
G+IG++ PEY + S DV E G+ F++ +
Sbjct: 196 DXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 255
Query: 846 ---WVESNLPENVLQVL-DPELRQLMTSNE-SQTIQLHDCLITIIGSVGLSCTTESPGGR 900
WV+ L E L+ L D +L+ E Q IQ V L CT SP R
Sbjct: 256 LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQ-----------VALLCTQSSPMER 304
Query: 901 IGIREALRRLK 911
+ E +R L+
Sbjct: 305 PKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 132/311 (42%), Gaps = 71/311 (22%)
Query: 650 KISYDELRRATGNFSHENLIGSGSFGSV---------------LHNERT-GSWKSFIAEC 693
+ S EL+ A+ NF ++N++G G FG V L ERT G F E
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEV 78
Query: 694 ETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLG-------------DWIHG 740
E + HRNL++L C + + LVY +++NGS+ DW
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTER-----LLVYPYMANGSVASCLRERPESQPPLDWPKR 133
Query: 741 ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQS 800
+R L L YLH+ C+ ++H D+K NILLDEE A VGDFGLA+ + +
Sbjct: 134 QRIA-LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-----DYK 187
Query: 801 SISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTS-----ESFAGE--FNIVK-------- 845
G IG++ PEY + S DV E G+ F++ +
Sbjct: 188 DXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 247
Query: 846 ---WVESNLPENVLQVL-DPELRQLMTSNE-SQTIQLHDCLITIIGSVGLSCTTESPGGR 900
WV+ L E L+ L D +L+ E Q IQ V L CT SP R
Sbjct: 248 LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQ-----------VALLCTQSSPMER 296
Query: 901 IGIREALRRLK 911
+ E +R L+
Sbjct: 297 PKMSEVVRMLE 307
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 122/265 (46%), Gaps = 45/265 (16%)
Query: 344 IPESIGNFSNELSKLYLGG-NHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIXXXXX 402
IP S+ N L+ LY+GG N++ G IP +I +L L L +++ ++SG
Sbjct: 68 IPSSLANLP-YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSG----------- 115
Query: 403 XXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRIN 462
IP+ L+ +K L +D S N L+G +P S + +L+ I NRI+
Sbjct: 116 -------------AIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRIS 162
Query: 463 GNIPKG-----------------ILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCK 505
G IP + +P + L N+ +DLS N L G+ + K
Sbjct: 163 GAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDK 221
Query: 506 SLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNL 565
+ +++ +A N + + V K L LDL +N++ G++P L L+ L SLN++FNNL
Sbjct: 222 NTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNL 280
Query: 566 EGVVPSEGIFRNMSNVHLKGNPKLC 590
G +P G + N LC
Sbjct: 281 CGEIPQGGNLQRFDVSAYANNKCLC 305
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 13/232 (5%)
Query: 241 PYDVRDTLPNL--LDFIYC--FNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNL 296
PY + +L NL L+F+Y N G IP ++ LT + + +TH + G +P L +
Sbjct: 65 PYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQI 124
Query: 297 PFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELS 356
L T + +N + SG + S+++ +L + DGN+ G IP+S G+FS +
Sbjct: 125 KTLVTLDFSYNAL--SG-----TLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFT 177
Query: 357 KLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIXXXXXXXXXXXXXNEIPGG 416
+ + N + GKIP + L +L +DLS N + G+ + N +
Sbjct: 178 SMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD 236
Query: 417 IPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKG 468
+ + K LN +DL N + G +P + L S+++S N + G IP+G
Sbjct: 237 L-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 35/228 (15%)
Query: 83 LEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKL 142
L G I P I L+ L + + + +SG +P + + L L+ S+N L G LP +IS L
Sbjct: 89 LVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSL 148
Query: 143 TELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENL 202
L + N+I+G + D + + +N L G IPP+ ANL NL
Sbjct: 149 PNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL---------NL 199
Query: 203 KVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFT 262
+DL+ N L G + + + LA N L ++
Sbjct: 200 AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL---------------------- 237
Query: 263 GKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIV 310
GK+ S N+ + + +N + GTLP GL L FL + N+ FN +
Sbjct: 238 GKVGLS----KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLC 281
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 451 LLSIDLSNNRING------NIPKGILRPLPEEISRLENVVTIDLSD-NSLSGNLPNSLKN 503
L D R+N N+PK P+P ++ L + + + N+L G +P ++
Sbjct: 42 LCDTDTQTYRVNNLDLSGLNLPKPY--PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAK 99
Query: 504 CKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFN 563
L L + + SG IP+ ++++K L LD S N LSG++P + +L L + N
Sbjct: 100 LTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159
Query: 564 NLEGVVP-SEGIFRNM 578
+ G +P S G F +
Sbjct: 160 RISGAIPDSYGSFSKL 175
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 97 LRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELP 136
L + L+NN++ G LP+ + L L LN+SFNNL GE+P
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 118/256 (46%), Gaps = 62/256 (24%)
Query: 655 ELRRATGNFSHENLIGSGSFGSVLHN---------------ERTGSWKSFIAECETLRNV 699
+L AT NF H+ LIG G FG V E + + F E ETL
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 700 RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG----------ERKNELDIT 749
RH +LV LI C D +N + L+Y+++ NG+L ++G E++ E+ I
Sbjct: 93 RHPHLVSLIGFC---DERNE--MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 750 SA--LDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH- 806
+A L YLH ++H D+K NILLDE K+ DFG+++ + + TH
Sbjct: 148 AARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK-------KGTELDQTHL 197
Query: 807 --VFMGSIGYVPPEYGLGERPSTAGDVPT---------------SESFAGEF-NIVKW-V 847
V G++GY+ PEY + R + DV + +S E N+ +W V
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 848 ESNLPENVLQVLDPEL 863
ES+ + Q++DP L
Sbjct: 258 ESHNNGQLEQIVDPNL 273
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 118/256 (46%), Gaps = 62/256 (24%)
Query: 655 ELRRATGNFSHENLIGSGSFGSVLHN---------------ERTGSWKSFIAECETLRNV 699
+L AT NF H+ LIG G FG V E + + F E ETL
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 700 RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG----------ERKNELDIT 749
RH +LV LI C D +N + L+Y+++ NG+L ++G E++ E+ I
Sbjct: 93 RHPHLVSLIGFC---DERNE--MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 750 SA--LDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH- 806
+A L YLH ++H D+K NILLDE K+ DFG+++ + + TH
Sbjct: 148 AARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK-------KGTELGQTHL 197
Query: 807 --VFMGSIGYVPPEYGLGERPSTAGDVPT---------------SESFAGEF-NIVKW-V 847
V G++GY+ PEY + R + DV + +S E N+ +W V
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 848 ESNLPENVLQVLDPEL 863
ES+ + Q++DP L
Sbjct: 258 ESHNNGQLEQIVDPNL 273
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 121/282 (42%), Gaps = 51/282 (18%)
Query: 669 IGSGSFGSVLHNERTGS----------------WKSFIAECETLRNVRHRNLVKLITSCS 712
IG+GSFG+V E GS F+ E ++ +RH N+V + + +
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 713 SLDSKNMEFLALVYEFLSNGSLGDWIH--------GERKN---ELDITSALDYLHNDCEV 761
+ L++V E+LS GSL +H ER+ D+ ++YLHN
Sbjct: 105 QPPN-----LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NP 158
Query: 762 PVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGL 821
P+VH +LK N+L+D++ T KV DFGL+R S+ S+ G+ ++ PE L
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRL------KASTFLSSKSAAGTPEWMAPEV-L 211
Query: 822 GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCL 881
+ PS +S F ++ W + L + L+P + + +++ L
Sbjct: 212 RDEPS------NEKSDVYSFGVILWELATL-QQPWGNLNPAQVVAAVGFKCKRLEIPRNL 264
Query: 882 ITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLKQQVP 923
+ ++ C T P R + L+ L+K VP
Sbjct: 265 NPQVAAIIEGCWTNEPWKRPSFATIMDLLRP----LIKSAVP 302
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 33/150 (22%)
Query: 669 IGSGSFGSVLHNERTGS----------------WKSFIAECETLRNVRHRNLVKLITSCS 712
IG+GSFG+V E GS F+ E ++ +RH N+V + + +
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 713 SLDSKNMEFLALVYEFLSNGSLGDWIH--GERKN---------ELDITSALDYLHNDCEV 761
+ L++V E+LS GSL +H G R+ D+ ++YLHN
Sbjct: 105 QPPN-----LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NP 158
Query: 762 PVVHSDLKPGNILLDEEMTAKVGDFGLARF 791
P+VH DLK N+L+D++ T KV DFGL+R
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 84/191 (43%), Gaps = 46/191 (24%)
Query: 669 IGSGSFGSVLHNERTGSW------------------KSFIAECETLRNVRHRNLVKLITS 710
+G G FG V G+W ++F+ E + ++ +RH LV+L
Sbjct: 192 LGQGCFGEVW----MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 711 CSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHNDCE 760
S E + +V E++S GSL D++ GE L I S + Y+
Sbjct: 248 VSE------EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER--- 298
Query: 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYG 820
+ VH DL+ NIL+ E + KV DFGLAR L+E DN+ + F I + PE
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLAR-LIE--DNEYTARQGAKF--PIKWTAPEAA 353
Query: 821 LGERPSTAGDV 831
L R + DV
Sbjct: 354 LYGRFTIKSDV 364
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 84/191 (43%), Gaps = 46/191 (24%)
Query: 669 IGSGSFGSVLHNERTGSW------------------KSFIAECETLRNVRHRNLVKLITS 710
+G G FG V G+W ++F+ E + ++ +RH LV+L
Sbjct: 192 LGQGCFGEVW----MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 711 CSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHNDCE 760
S E + +V E++S GSL D++ GE L I S + Y+
Sbjct: 248 VSE------EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER--- 298
Query: 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYG 820
+ VH DL+ NIL+ E + KV DFGLAR L+E DN+ + F I + PE
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLAR-LIE--DNEYTARQGAKF--PIKWTAPEAA 353
Query: 821 LGERPSTAGDV 831
L R + DV
Sbjct: 354 LYGRFTIKSDV 364
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 38/187 (20%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G G FG V G+ + +F+ E + ++ +RH LV+L S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 74
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHNDCEVPVV 764
E + +V E++S GSL D++ GE L I S + Y+ + V
Sbjct: 75 -----EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 126
Query: 765 HSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER 824
H DL+ NIL+ E + KV DFGLAR L+E DN+ + F I + PE L R
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLAR-LIE--DNEXTARQGAKF--PIKWTAPEAALYGR 181
Query: 825 PSTAGDV 831
+ DV
Sbjct: 182 FTIKSDV 188
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 56/186 (30%), Positives = 82/186 (44%), Gaps = 36/186 (19%)
Query: 669 IGSGSFGSV-----LHNERTG---------SWKSFIAECETLRNVRHRNLVKLITSCSSL 714
IGSG FG V L+ ++ S + FI E E + + H LV+L C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERK---------NELDITSALDYLHNDCEVPVVH 765
+ LV+EF+ +G L D++ +R LD+ + YL C V+H
Sbjct: 73 AP-----ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 124
Query: 766 SDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERP 825
DL N L+ E KV DFG+ RF+L D+Q + S+ F + + PE R
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVL---DDQYTSSTGTKF--PVKWASPEVFSFSRY 179
Query: 826 STAGDV 831
S+ DV
Sbjct: 180 SSKSDV 185
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 56/186 (30%), Positives = 82/186 (44%), Gaps = 36/186 (19%)
Query: 669 IGSGSFGSV-----LHNERTG---------SWKSFIAECETLRNVRHRNLVKLITSCSSL 714
IGSG FG V L+ ++ S + FI E E + + H LV+L C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERK---------NELDITSALDYLHNDCEVPVVH 765
+ LV+EF+ +G L D++ +R LD+ + YL C V+H
Sbjct: 78 AP-----ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 129
Query: 766 SDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERP 825
DL N L+ E KV DFG+ RF+L D+Q + S+ F + + PE R
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVL---DDQYTSSTGTKF--PVKWASPEVFSFSRY 184
Query: 826 STAGDV 831
S+ DV
Sbjct: 185 SSKSDV 190
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 56/186 (30%), Positives = 82/186 (44%), Gaps = 36/186 (19%)
Query: 669 IGSGSFGSV-----LHNERTG---------SWKSFIAECETLRNVRHRNLVKLITSCSSL 714
IGSG FG V L+ ++ S + FI E E + + H LV+L C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERK---------NELDITSALDYLHNDCEVPVVH 765
+ LV+EF+ +G L D++ +R LD+ + YL C V+H
Sbjct: 75 AP-----ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 766 SDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERP 825
DL N L+ E KV DFG+ RF+L D+Q + S+ F + + PE R
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVL---DDQYTSSTGTKF--PVKWASPEVFSFSRY 181
Query: 826 STAGDV 831
S+ DV
Sbjct: 182 SSKSDV 187
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 38/187 (20%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G G FG V G+ + +F+ E + ++ +RH LV+L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE- 84
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHNDCEVPVV 764
E + +V E++S GSL D++ GE L I S + Y+ + V
Sbjct: 85 -----EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 136
Query: 765 HSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER 824
H DL+ NIL+ E + KV DFGLAR L+E DN+ + F I + PE L R
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLAR-LIE--DNEYTARQGAKF--PIKWTAPEAALYGR 191
Query: 825 PSTAGDV 831
+ DV
Sbjct: 192 FTIKSDV 198
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 38/187 (20%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G G FG V G+ + +F+ E + ++ +RH LV+L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 84
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHNDCEVPVV 764
E + +V E++S GSL D++ GE L I S + Y+ + V
Sbjct: 85 -----EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 136
Query: 765 HSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER 824
H DL+ NIL+ E + KV DFGLAR L+E DN+ + F I + PE L R
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLAR-LIE--DNEXTARQGAKF--PIKWTAPEAALYGR 191
Query: 825 PSTAGDV 831
+ DV
Sbjct: 192 FTIKSDV 198
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 84/191 (43%), Gaps = 46/191 (24%)
Query: 669 IGSGSFGSVLHNERTGSW------------------KSFIAECETLRNVRHRNLVKLITS 710
+G G FG V G+W ++F+ E + ++ +RH LV+L
Sbjct: 192 LGQGCFGEVW----MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 711 CSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHNDCE 760
S E + +V E++S GSL D++ GE L I S + Y+
Sbjct: 248 VSE------EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER--- 298
Query: 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYG 820
+ VH DL+ NIL+ E + KV DFGLAR L+E DN+ + F I + PE
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLAR-LIE--DNEYTARQGAKF--PIKWTAPEAA 353
Query: 821 LGERPSTAGDV 831
L R + DV
Sbjct: 354 LYGRFTIKSDV 364
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 66.6 bits (161), Expect = 5e-11, Method: Composition-based stats.
Identities = 56/186 (30%), Positives = 81/186 (43%), Gaps = 36/186 (19%)
Query: 669 IGSGSFGSV-----LHNERTG---------SWKSFIAECETLRNVRHRNLVKLITSCSSL 714
IGSG FG V L+ ++ S FI E E + + H LV+L C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERK---------NELDITSALDYLHNDCEVPVVH 765
+ LV+EF+ +G L D++ +R LD+ + YL C V+H
Sbjct: 95 AP-----ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 146
Query: 766 SDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERP 825
DL N L+ E KV DFG+ RF+L D+Q + S+ F + + PE R
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVL---DDQYTSSTGTKF--PVKWASPEVFSFSRY 201
Query: 826 STAGDV 831
S+ DV
Sbjct: 202 SSKSDV 207
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 38/187 (20%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G G FG V G+ + +F+ E + ++ +RH LV+L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 84
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHNDCEVPVV 764
E + +V E++S GSL D++ GE L I S + Y+ + V
Sbjct: 85 -----EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 136
Query: 765 HSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER 824
H DL+ NIL+ E + KV DFGLAR L+E DN+ + F I + PE L R
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLAR-LIE--DNEYTARQGAKF--PIKWTAPEAALYGR 191
Query: 825 PSTAGDV 831
+ DV
Sbjct: 192 FTIKSDV 198
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 83/194 (42%), Gaps = 46/194 (23%)
Query: 666 ENLIGSGSFGSVLHNERTGSW------------------KSFIAECETLRNVRHRNLVKL 707
E +G G FG V G+W ++F+ E + ++ +RH LV+L
Sbjct: 272 EVKLGQGCFGEVW----MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 327
Query: 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHN 757
S E + +V E++S GSL D++ GE L I S + Y+
Sbjct: 328 YAVVSE------EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 381
Query: 758 DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPP 817
+ VH DL+ NIL+ E + KV DFGLAR + DN+ + F I + P
Sbjct: 382 ---MNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKF--PIKWTAP 433
Query: 818 EYGLGERPSTAGDV 831
E L R + DV
Sbjct: 434 EAALYGRFTIKSDV 447
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 38/187 (20%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G G FG V G+ + +F+ E + ++ +RH LV+L S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 77
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHNDCEVPVV 764
E + +V E++S GSL D++ GE L I S + Y+ + V
Sbjct: 78 -----EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 129
Query: 765 HSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER 824
H DL+ NIL+ E + KV DFGLAR L+E DN+ + F I + PE L R
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLAR-LIE--DNEYTARQGAKF--PIKWTAPEAALYGR 184
Query: 825 PSTAGDV 831
+ DV
Sbjct: 185 FTIKSDV 191
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 38/187 (20%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G G FG V G+ + +F+ E + ++ +RH LV+L S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 73
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHNDCEVPVV 764
E + +V E++S GSL D++ GE L I S + Y+ + V
Sbjct: 74 -----EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 125
Query: 765 HSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER 824
H DL+ NIL+ E + KV DFGLAR L+E DN+ + F I + PE L R
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLAR-LIE--DNEYTARQGAKF--PIKWTAPEAALYGR 180
Query: 825 PSTAGDV 831
+ DV
Sbjct: 181 FTIKSDV 187
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 38/187 (20%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G G FG V G+ + +F+ E + ++ +RH LV+L S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 75
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHNDCEVPVV 764
E + +V E++S GSL D++ GE L I S + Y+ + V
Sbjct: 76 -----EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 127
Query: 765 HSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER 824
H DL+ NIL+ E + KV DFGLAR L+E DN+ + F I + PE L R
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLAR-LIE--DNEYTARQGAKF--PIKWTAPEAALYGR 182
Query: 825 PSTAGDV 831
+ DV
Sbjct: 183 FTIKSDV 189
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 38/187 (20%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G G FG V G+ + +F+ E + ++ +RH LV+L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 84
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHNDCEVPVV 764
E + +V E++S GSL D++ GE L I S + Y+ + V
Sbjct: 85 -----EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 136
Query: 765 HSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER 824
H DL+ NIL+ E + KV DFGLAR L+E DN+ + F I + PE L R
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLAR-LIE--DNEYTARQGAKF--PIKWTAPEAALYGR 191
Query: 825 PSTAGDV 831
+ DV
Sbjct: 192 FTIKSDV 198
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 66.2 bits (160), Expect = 8e-11, Method: Composition-based stats.
Identities = 56/186 (30%), Positives = 82/186 (44%), Gaps = 36/186 (19%)
Query: 669 IGSGSFGSV-----LHNERTG---------SWKSFIAECETLRNVRHRNLVKLITSCSSL 714
IGSG FG V L+ ++ S + FI E E + + H LV+L C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERK---------NELDITSALDYLHNDCEVPVVH 765
+ LV+EF+ +G L D++ +R LD+ + YL E V+H
Sbjct: 75 AP-----ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIH 126
Query: 766 SDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERP 825
DL N L+ E KV DFG+ RF+L D+Q + S+ F + + PE R
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVL---DDQYTSSTGTKF--PVKWASPEVFSFSRY 181
Query: 826 STAGDV 831
S+ DV
Sbjct: 182 SSKSDV 187
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 66.2 bits (160), Expect = 8e-11, Method: Composition-based stats.
Identities = 64/210 (30%), Positives = 87/210 (41%), Gaps = 53/210 (25%)
Query: 652 SYDELRRATGNFSHE------NLIGSGSFGSVLH---NERTGSWKSFIA----------- 691
S+ EL+ T NF N +G G FG V N T + K A
Sbjct: 10 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQ 69
Query: 692 ----ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD 747
E + + +H NLV+L+ S D L LVY ++ NGSL D R + LD
Sbjct: 70 QFDQEIKVMAKCQHENLVELLGFSSDGDD-----LCLVYVYMPNGSLLD-----RLSCLD 119
Query: 748 ITSALDYLHNDCEVPV--------------VHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
T L + H C++ +H D+K NILLDE TAK+ DFGLAR
Sbjct: 120 GTPPLSW-HMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR--- 175
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGE 823
+ + +G+ Y+ PE GE
Sbjct: 176 -ASEKFAQXVMXXRIVGTTAYMAPEALRGE 204
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 90/209 (43%), Gaps = 49/209 (23%)
Query: 651 ISYDELRRATGNFSHE------NLIGSGSFGSVLH---NERTGSWKSFIA---------- 691
S+ EL+ T NF N +G G FG V N T + K A
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 692 -----ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGD---------- 736
E + + +H NLV+L+ S D L LVY ++ NGSL D
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDD-----LCLVYVYMPNGSLLDRLSCLDGTPP 129
Query: 737 --WIHGERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794
W H K + +++LH + + H D+K NILLDE TAK+ DFGLAR E
Sbjct: 130 LSW-HMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLAR-ASE 184
Query: 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGE 823
+ Q+ + S +G+ Y+ PE GE
Sbjct: 185 KF-AQTVMXSR--IVGTTAYMAPEALRGE 210
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 66.2 bits (160), Expect = 8e-11, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 38/187 (20%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G G FG V G+ + +F+ E + ++ +RH LV+L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 84
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHNDCEVPVV 764
E + +V E++S GSL D++ GE L I S + Y+ + V
Sbjct: 85 -----EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 136
Query: 765 HSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER 824
H DL+ NIL+ E + KV DFGLAR L+E DN+ + F I + PE L R
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLAR-LIE--DNEYTARQGAKF--PIKWTAPEAALYGR 191
Query: 825 PSTAGDV 831
+ DV
Sbjct: 192 FTIKSDV 198
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 86/209 (41%), Gaps = 49/209 (23%)
Query: 651 ISYDELRRATGNFSHE------NLIGSGSFGSVLH---NERTGSWKSFIA---------- 691
S+ EL+ T NF N +G G FG V N T + K A
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 692 -----ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGD---------- 736
E + + +H NLV+L+ S D L LVY ++ NGSL D
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDD-----LCLVYVYMPNGSLLDRLSCLDGTPP 129
Query: 737 --WIHGERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794
W H K + +++LH + + H D+K NILLDE TAK+ DFGLAR
Sbjct: 130 LSW-HMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLAR---- 181
Query: 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGE 823
+ + +G+ Y+ PE GE
Sbjct: 182 ASEKFAQTVMXXRIVGTTAYMAPEALRGE 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 81/191 (42%), Gaps = 46/191 (24%)
Query: 669 IGSGSFGSVLHNERTGSW------------------KSFIAECETLRNVRHRNLVKLITS 710
+G G FG V G+W ++F+ E + ++ +RH LV+L
Sbjct: 193 LGQGCFGEVW----MGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAV 248
Query: 711 CSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHNDCE 760
S E + +V E++S GSL D++ GE L I S + Y+
Sbjct: 249 VSE------EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER--- 299
Query: 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYG 820
+ VH DL+ NIL+ E + KV DFGL R + DN+ + F I + PE
Sbjct: 300 MNYVHRDLRAANILVGENLVCKVADFGLGRLI---EDNEYTARQGAKF--PIKWTAPEAA 354
Query: 821 LGERPSTAGDV 831
L R + DV
Sbjct: 355 LYGRFTIKSDV 365
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/186 (30%), Positives = 81/186 (43%), Gaps = 36/186 (19%)
Query: 669 IGSGSFGSV-----LHNERTG---------SWKSFIAECETLRNVRHRNLVKLITSCSSL 714
IGSG FG V L+ ++ S + FI E E + + H LV+L C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERK---------NELDITSALDYLHNDCEVPVVH 765
+ LV EF+ +G L D++ +R LD+ + YL C V+H
Sbjct: 76 AP-----ICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 127
Query: 766 SDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERP 825
DL N L+ E KV DFG+ RF+L D+Q + S+ F + + PE R
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVL---DDQYTSSTGTKF--PVKWASPEVFSFSRY 182
Query: 826 STAGDV 831
S+ DV
Sbjct: 183 SSKSDV 188
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 82/187 (43%), Gaps = 38/187 (20%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G G FG V G+ + +F+ E + ++ +RH LV+L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 84
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHNDCEVPVV 764
E + +V E++S GSL D++ GE L I S + Y+ + V
Sbjct: 85 -----EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 136
Query: 765 HSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER 824
H DL NIL+ E + KV DFGLAR L+E DN+ + F I + PE L R
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLAR-LIE--DNEYTARQGAKF--PIKWTAPEAALYGR 191
Query: 825 PSTAGDV 831
+ DV
Sbjct: 192 FTIKSDV 198
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 38/187 (20%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G G FG V G+ + +F+ E + ++ +RH LV+L S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 81
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHNDCEVPVV 764
E + +V E+++ GSL D++ GE L I S + Y+ + V
Sbjct: 82 -----EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYV 133
Query: 765 HSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER 824
H DL+ NIL+ E + KV DFGLAR L+E DN+ + F I + PE L R
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLAR-LIE--DNEYTARQGAKF--PIKWTAPEAALYGR 188
Query: 825 PSTAGDV 831
+ DV
Sbjct: 189 FTIKSDV 195
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 38/187 (20%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G G FG V G+ + +F+ E + ++ +RH LV+L S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 81
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHNDCEVPVV 764
E + +V E+++ GSL D++ GE L I S + Y+ + V
Sbjct: 82 -----EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYV 133
Query: 765 HSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER 824
H DL+ NIL+ E + KV DFGLAR L+E DN+ + F I + PE L R
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLAR-LIE--DNEWTARQGAKF--PIKWTAPEAALYGR 188
Query: 825 PSTAGDV 831
+ DV
Sbjct: 189 FTIKSDV 195
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 55/187 (29%), Positives = 82/187 (43%), Gaps = 38/187 (20%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G G FG V G+ + +F+ E + ++ +RH LV+L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 84
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHNDCEVPVV 764
E + +V E++S G L D++ GE L I S + Y+ + V
Sbjct: 85 -----EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 136
Query: 765 HSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER 824
H DL+ NIL+ E + KV DFGLAR L+E DN+ + F I + PE L R
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLAR-LIE--DNEYTARQGAKF--PIKWTAPEAALYGR 191
Query: 825 PSTAGDV 831
+ DV
Sbjct: 192 FTIKSDV 198
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 55/187 (29%), Positives = 82/187 (43%), Gaps = 38/187 (20%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G G FG V G+ + +F+ E + ++ +RH LV+L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 84
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHNDCEVPVV 764
E + +V E++S G L D++ GE L I S + Y+ + V
Sbjct: 85 -----EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 136
Query: 765 HSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER 824
H DL+ NIL+ E + KV DFGLAR L+E DN+ + F I + PE L R
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLAR-LIE--DNEYTARQGAKF--PIKWTAPEAALYGR 191
Query: 825 PSTAGDV 831
+ DV
Sbjct: 192 FTIKSDV 198
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 49/136 (36%), Positives = 70/136 (51%), Gaps = 25/136 (18%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--HGERKNELD-- 747
E + L+ RH +++KL S+ +F +V E++S G L D+I HG R E++
Sbjct: 61 EIQNLKLFRHPHIIKLYQVIST----PTDFF-MVMEYVSGGELFDYICKHG-RVEEMEAR 114
Query: 748 -----ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSI 802
I SA+DY H VVH DLKP N+LLD M AK+ DFGL+ + + ++S
Sbjct: 115 RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC 171
Query: 803 SSTHVFMGSIGYVPPE 818
GS Y PE
Sbjct: 172 -------GSPNYAAPE 180
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 18/110 (16%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--HGERKNELD-- 747
E + L+ RH +++KL S+ +F +V E++S G L D+I HG R E++
Sbjct: 61 EIQNLKLFRHPHIIKLYQVIST----PTDFF-MVMEYVSGGELFDYICKHG-RVEEMEAR 114
Query: 748 -----ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I SA+DY H VVH DLKP N+LLD M AK+ DFGL+ +
Sbjct: 115 RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM 161
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 19/158 (12%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG 740
E+ + K F E + H+N+V +I +D ++ + LV E++ +L ++I
Sbjct: 50 EKEETLKRFEREVHNSSQLSHQNIVSMI----DVDEED-DCYYLVMEYIEGPTLSEYI-- 102
Query: 741 ERKNELDITSA-------LDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E L + +A LD + + ++ +VH D+KP NIL+D T K+ DFG+A+ L
Sbjct: 103 ESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL- 161
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
+++S++ T+ +G++ Y PE GE D+
Sbjct: 162 ----SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDI 195
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 82/194 (42%), Gaps = 43/194 (22%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETL 696
S D+ G + IGSGSFG+V + G ++F E L
Sbjct: 15 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG-----ERKNELDITS- 750
R RH N++ + + LA+V ++ SL +H E K +DI
Sbjct: 75 RKTRHVNILLFMGYSTKPQ------LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ 128
Query: 751 ---ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
+DYLH ++H DLK NI L E+ T K+GDFGLA +S S +H
Sbjct: 129 TARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLA-------TEKSRWSGSHQ 178
Query: 808 F---MGSIGYVPPE 818
F GSI ++ PE
Sbjct: 179 FEQLSGSILWMAPE 192
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 82/192 (42%), Gaps = 43/192 (22%)
Query: 654 DELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRN 698
D+ G + IGSGSFG+V + G ++F E LR
Sbjct: 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 76
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG-----ERKNELDITS--- 750
RH N++ + ++ LA+V ++ SL +H E K +DI
Sbjct: 77 TRHVNILLFMGYSTAPQ------LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTA 130
Query: 751 -ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVF- 808
+DYLH ++H DLK NI L E+ T K+GDFGLA +S S +H F
Sbjct: 131 RGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLA-------TEKSRWSGSHQFE 180
Query: 809 --MGSIGYVPPE 818
GSI ++ PE
Sbjct: 181 QLSGSILWMAPE 192
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 82/194 (42%), Gaps = 43/194 (22%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETL 696
S D+ G + IGSGSFG+V + G ++F E L
Sbjct: 3 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 62
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG-----ERKNELDITS- 750
R RH N++ + + LA+V ++ SL +H E K +DI
Sbjct: 63 RKTRHVNILLFMGYSTKPQ------LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ 116
Query: 751 ---ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
+DYLH ++H DLK NI L E+ T K+GDFGLA +S S +H
Sbjct: 117 TARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATV-------KSRWSGSHQ 166
Query: 808 F---MGSIGYVPPE 818
F GSI ++ PE
Sbjct: 167 FEQLSGSILWMAPE 180
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 84/192 (43%), Gaps = 43/192 (22%)
Query: 654 DELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRN 698
D+ G + IGSGSFG+V + G ++F E LR
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG-ERKNEL----DIT---- 749
RH N++ + ++ LA+V ++ SL +H E K E+ DI
Sbjct: 61 TRHVNILLFMGYSTAPQ------LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 114
Query: 750 SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVF- 808
+DYLH ++H DLK NI L E++T K+GDFGLA +S S +H F
Sbjct: 115 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATV-------KSRWSGSHQFE 164
Query: 809 --MGSIGYVPPE 818
GSI ++ PE
Sbjct: 165 QLSGSILWMAPE 176
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 84/194 (43%), Gaps = 43/194 (22%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETL 696
S D+ G + IGSGSFG+V + G ++F E L
Sbjct: 19 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 78
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG-ERKNEL----DIT-- 749
R RH N++ + + LA+V ++ SL +H E K E+ DI
Sbjct: 79 RKTRHVNILLFMGYSTKPQ------LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 132
Query: 750 --SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
+DYLH ++H DLK NI L E++T K+GDFGLA +S S +H
Sbjct: 133 TAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA-------TEKSRWSGSHQ 182
Query: 808 F---MGSIGYVPPE 818
F GSI ++ PE
Sbjct: 183 FEQLSGSILWMAPE 196
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 83/192 (43%), Gaps = 43/192 (22%)
Query: 654 DELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRN 698
D+ G + IGSGSFG+V + G ++F E LR
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG-ERKNEL----DIT---- 749
RH N++ + + LA+V ++ SL +H E K E+ DI
Sbjct: 61 TRHVNILLFMGYSTKPQ------LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 114
Query: 750 SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVF- 808
+DYLH ++H DLK NI L E++T K+GDFGLA +S S +H F
Sbjct: 115 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA-------TEKSRWSGSHQFE 164
Query: 809 --MGSIGYVPPE 818
GSI ++ PE
Sbjct: 165 QLSGSILWMAPE 176
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 84/194 (43%), Gaps = 43/194 (22%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETL 696
S D+ G + IGSGSFG+V + G ++F E L
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG-ERKNEL----DIT-- 749
R RH N++ + + LA+V ++ SL +H E K E+ DI
Sbjct: 87 RKTRHVNILLFMGYSTKPQ------LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 750 --SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
+DYLH ++H DLK NI L E++T K+GDFGLA +S S +H
Sbjct: 141 TAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA-------TEKSRWSGSHQ 190
Query: 808 F---MGSIGYVPPE 818
F GSI ++ PE
Sbjct: 191 FEQLSGSILWMAPE 204
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 43/169 (25%)
Query: 658 RATGNFSHENLIGSGSFGSVL-----------------HNERTGSWKSFIAECETLRNVR 700
R +F ++G G+FG V+ H E S + ++E L ++
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS--TILSEVMLLASLN 60
Query: 701 HRNLVK----------LITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE----- 745
H+ +V+ + +++ K+ F+ + E+ NG+L D IH E N+
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQM--EYCENGTLYDLIHSENLNQQRDEY 118
Query: 746 ----LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
I AL Y+H+ ++H DLKP NI +DE K+GDFGLA+
Sbjct: 119 WRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 29/179 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSK-NME 720
+F ++G GSF +V+ + + + + R++ N V +T + S+ +
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 721 FLALVY-------------EFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDC 759
F +Y + NG L +I R +I SAL+YLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++H DLKP NILL+E+M ++ DFG A+ L +S + + F+G+ YV PE
Sbjct: 151 ---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANAFVGTAQYVSPE 202
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 84/194 (43%), Gaps = 43/194 (22%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETL 696
S D+ G + IGSGSFG+V + G ++F E L
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG-ERKNEL----DIT-- 749
R RH N++ + + LA+V ++ SL +H E K E+ DI
Sbjct: 64 RKTRHVNILLFMGYSTKPQ------LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 117
Query: 750 --SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
+DYLH ++H DLK NI L E++T K+GDFGLA +S S +H
Sbjct: 118 TAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATV-------KSRWSGSHQ 167
Query: 808 F---MGSIGYVPPE 818
F GSI ++ PE
Sbjct: 168 FEQLSGSILWMAPE 181
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 84/194 (43%), Gaps = 43/194 (22%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETL 696
S D+ G + IGSGSFG+V + G ++F E L
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 60
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG-ERKNEL----DIT-- 749
R RH N++ + + LA+V ++ SL +H E K E+ DI
Sbjct: 61 RKTRHVNILLFMGYSTKPQ------LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 114
Query: 750 --SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
+DYLH ++H DLK NI L E++T K+GDFGLA +S S +H
Sbjct: 115 TAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATV-------KSRWSGSHQ 164
Query: 808 F---MGSIGYVPPE 818
F GSI ++ PE
Sbjct: 165 FEQLSGSILWMAPE 178
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 84/194 (43%), Gaps = 43/194 (22%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETL 696
S D+ G + IGSGSFG+V + G ++F E L
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG-ERKNEL----DIT-- 749
R RH N++ + + LA+V ++ SL +H E K E+ DI
Sbjct: 64 RKTRHVNILLFMGYSTKPQ------LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 117
Query: 750 --SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
+DYLH ++H DLK NI L E++T K+GDFGLA +S S +H
Sbjct: 118 TAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATV-------KSRWSGSHQ 167
Query: 808 F---MGSIGYVPPE 818
F GSI ++ PE
Sbjct: 168 FEQLSGSILWMAPE 181
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 29/179 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSK-NME 720
+F ++G GSF +V+ + + + + R++ N V +T + S+ +
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 721 FLALVY-------------EFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDC 759
F +Y + NG L +I R +I SAL+YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++H DLKP NILL+E+M ++ DFG A+ L +S + + F+G+ YV PE
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXFVGTAQYVSPE 204
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 29/179 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSK-NME 720
+F ++G GSF +V+ + + + + R++ N V +T + S+ +
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 721 FLALVY-------------EFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDC 759
F +Y + NG L +I R +I SAL+YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++H DLKP NILL+E+M ++ DFG A+ L +S + + F+G+ YV PE
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXFVGTAQYVSPE 204
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 84/194 (43%), Gaps = 43/194 (22%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETL 696
S D+ G + IGSGSFG+V + G ++F E L
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG-ERKNEL----DIT-- 749
R RH N++ + + LA+V ++ SL +H E K E+ DI
Sbjct: 87 RKTRHVNILLFMGYSTKPQ------LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 750 --SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
+DYLH ++H DLK NI L E++T K+GDFGLA +S S +H
Sbjct: 141 TAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATV-------KSRWSGSHQ 190
Query: 808 F---MGSIGYVPPE 818
F GSI ++ PE
Sbjct: 191 FEQLSGSILWMAPE 204
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 29/179 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSK-NME 720
+F ++G GSF +V+ + + + + R++ N V +T + S+ +
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 721 FLALVY-------------EFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDC 759
F +Y + NG L +I R +I SAL+YLH
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++H DLKP NILL+E+M ++ DFG A+ L +S + + F+G+ YV PE
Sbjct: 154 ---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXFVGTAQYVSPE 205
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 29/179 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSK-NME 720
+F ++G GSF +V+ + + + + R++ N V +T + S+ +
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 721 FLALVY-------------EFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDC 759
F +Y + NG L +I R +I SAL+YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++H DLKP NILL+E+M ++ DFG A+ L +S + + F+G+ YV PE
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXFVGTAQYVSPE 204
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 84/194 (43%), Gaps = 43/194 (22%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETL 696
S D+ G + IGSGSFG+V + G ++F E L
Sbjct: 26 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 85
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG-ERKNEL----DIT-- 749
R RH N++ + + LA+V ++ SL +H E K E+ DI
Sbjct: 86 RKTRHVNILLFMGYSTKPQ------LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 139
Query: 750 --SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
+DYLH ++H DLK NI L E++T K+GDFGLA +S S +H
Sbjct: 140 TAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATV-------KSRWSGSHQ 189
Query: 808 F---MGSIGYVPPE 818
F GSI ++ PE
Sbjct: 190 FEQLSGSILWMAPE 203
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 29/144 (20%)
Query: 669 IGSGSFGSVLHNERTG------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS 716
IG G FG V+ + G + ++F+AE + +RH NLV+L+ +
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLL----GVIV 69
Query: 717 KNMEFLALVYEFLSNGSLGDWIHGERKN----------ELDITSALDYLHNDCEVPVVHS 766
+ L +V E+++ GSL D++ ++ LD+ A++YL + VH
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 126
Query: 767 DLKPGNILLDEEMTAKVGDFGLAR 790
DL N+L+ E+ AKV DFGL +
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK 150
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 29/144 (20%)
Query: 669 IGSGSFGSVLHNERTG------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS 716
IG G FG V+ + G + ++F+AE + +RH NLV+L+ +
Sbjct: 20 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLL----GVIV 75
Query: 717 KNMEFLALVYEFLSNGSLGDWIHGERKN----------ELDITSALDYLHNDCEVPVVHS 766
+ L +V E+++ GSL D++ ++ LD+ A++YL + VH
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 132
Query: 767 DLKPGNILLDEEMTAKVGDFGLAR 790
DL N+L+ E+ AKV DFGL +
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTK 156
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 29/144 (20%)
Query: 669 IGSGSFGSVLHNERTG------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS 716
IG G FG V+ + G + ++F+AE + +RH NLV+L+ +
Sbjct: 29 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLL----GVIV 84
Query: 717 KNMEFLALVYEFLSNGSLGDWIHGERKN----------ELDITSALDYLHNDCEVPVVHS 766
+ L +V E+++ GSL D++ ++ LD+ A++YL + VH
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 141
Query: 767 DLKPGNILLDEEMTAKVGDFGLAR 790
DL N+L+ E+ AKV DFGL +
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTK 165
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 83/192 (43%), Gaps = 43/192 (22%)
Query: 654 DELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRN 698
D+ G + IGSGSFG+V + G ++F E LR
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG-ERKNEL----DIT---- 749
RH N++ + + LA+V ++ SL +H E K E+ DI
Sbjct: 61 TRHVNILLFMGYSTKPQ------LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 114
Query: 750 SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVF- 808
+DYLH ++H DLK NI L E++T K+GDFGLA +S S +H F
Sbjct: 115 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATV-------KSRWSGSHQFE 164
Query: 809 --MGSIGYVPPE 818
GSI ++ PE
Sbjct: 165 QLSGSILWMAPE 176
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 29/179 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSK-NME 720
+F ++G GSF +V+ + + + + R++ N V +T + S+ +
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 721 FLALVY-------------EFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDC 759
F +Y + NG L +I R +I SAL+YLH
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 155
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++H DLKP NILL+E+M ++ DFG A+ L +S + + F+G+ YV PE
Sbjct: 156 ---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXFVGTAQYVSPE 207
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 29/179 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSK-NME 720
+F ++G GSF +V+ + + + + R++ N V +T + S+ +
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 721 FLALVY-------------EFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDC 759
F +Y + NG L +I R +I SAL+YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++H DLKP NILL+E+M ++ DFG A+ L +S + + F+G+ YV PE
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXFVGTAQYVSPE 204
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 29/179 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSK-NME 720
+F ++G GSF +V+ + + + + R++ N V +T + S+ +
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 721 FLALVY-------------EFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDC 759
F +Y + NG L +I R +I SAL+YLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++H DLKP NILL+E+M ++ DFG A+ L +S + + F+G+ YV PE
Sbjct: 151 ---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXFVGTAQYVSPE 202
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 83/209 (39%), Gaps = 49/209 (23%)
Query: 651 ISYDELRRATGNFSHE------NLIGSGSFGSVLH---NERTGSWKSFIA---------- 691
S+ EL+ T NF N G G FG V N T + K A
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 692 -----ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGD---------- 736
E + +H NLV+L+ S D L LVY + NGSL D
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDD-----LCLVYVYXPNGSLLDRLSCLDGTPP 120
Query: 737 --WIHGERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794
W H K + +++LH + + H D+K NILLDE TAK+ DFGLAR E
Sbjct: 121 LSW-HXRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLAR-ASE 175
Query: 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGE 823
+ S +G+ Y PE GE
Sbjct: 176 KFAQXVXXSR---IVGTTAYXAPEALRGE 201
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 29/179 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSK-NME 720
+F ++G GSF +V+ + + + + R++ N V +T + S+ +
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 721 FLALVY-------------EFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDC 759
F +Y + NG L +I R +I SAL+YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++H DLKP NILL+E+M ++ DFG A+ L +S + + F+G+ YV PE
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXFVGTAQYVSPE 204
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 29/179 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITS----CSSLDSK 717
+F ++G GSF +V+ + + + + R++ N V +T S LD
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 718 NMEFLALVYE----------FLSNGSLGDWIHG--------ERKNELDITSALDYLHNDC 759
L ++ + NG L +I R +I SAL+YLH
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++H DLKP NILL+E+M ++ DFG A+ L +S + + F+G+ YV PE
Sbjct: 150 ---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXFVGTAQYVSPE 201
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 29/179 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSK-NME 720
+F ++G GSF +V+ + + + + R++ N V +T + S+ +
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 721 FLALVY-------------EFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDC 759
F +Y + NG L +I R +I SAL+YLH
Sbjct: 98 FFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 157
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++H DLKP NILL+E+M ++ DFG A+ L +S + + F+G+ YV PE
Sbjct: 158 ---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXFVGTAQYVSPE 209
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 29/179 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSK-NME 720
+F ++G GSF +V+ + + + + R++ N V +T + S+ +
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 721 FLALVY-------------EFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDC 759
F +Y + NG L +I R +I SAL+YLH
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++H DLKP NILL+E+M ++ DFG A+ L +S + + F+G+ YV PE
Sbjct: 154 ---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANSFVGTAQYVSPE 205
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 56/208 (26%)
Query: 657 RRATGNFSHENLIGSGSFGSVLHNERTGSWKSFIA------------ECETLRNVRHRNL 704
+R +F LIGSG FG V + K+++ E + L + H N+
Sbjct: 8 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNI 67
Query: 705 VKLI-----------TSCSSLDSKNME-------------FLALVYEFLSNGSLGDWIHG 740
V TS SL+S + + L + EF G+L WI
Sbjct: 68 VHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 741 ERKNELD----------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
R +LD IT +DY+H+ ++H DLKP NI L + K+GDFGL
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVT 184
Query: 791 FLLERVDNQSSISSTHVFMGSIGYVPPE 818
L + D + + S G++ Y+ PE
Sbjct: 185 SL--KNDGKRTRSK-----GTLRYMSPE 205
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 29/179 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSK-NME 720
+F ++G GSF +V+ + + + + R++ N V +T + S+ +
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 721 FLALVY-------------EFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDC 759
F +Y + NG L +I R +I SAL+YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++H DLKP NILL+E+M ++ DFG A+ L +S + + F+G+ YV PE
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANSFVGTAQYVSPE 204
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 29/179 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITS----CSSLDS- 716
+F ++G GSF +V+ + + + + R++ N V +T S LD
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 717 ---------KNMEFLALVYEFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDC 759
++ E L + NG L +I R +I SAL+YLH
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK- 133
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++H DLKP NILL+E+M ++ DFG A+ L +S + + F+G+ YV PE
Sbjct: 134 --GIIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXFVGTAQYVSPE 186
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 29/179 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITS----CSSLDS- 716
+F ++G GSF +V+ + + + + R++ N V +T S LD
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 717 ---------KNMEFLALVYEFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDC 759
++ E L + NG L +I R +I SAL+YLH
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK- 126
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++H DLKP NILL+E+M ++ DFG A+ L +S + + F+G+ YV PE
Sbjct: 127 --GIIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXFVGTAQYVSPE 179
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 29/179 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITS----CSSLDS- 716
+F ++G GSF +V+ + + + + R++ N V +T S LD
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 717 ---------KNMEFLALVYEFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDC 759
++ E L + NG L +I R +I SAL+YLH
Sbjct: 70 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK- 128
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++H DLKP NILL+E+M ++ DFG A+ L +S + + F+G+ YV PE
Sbjct: 129 --GIIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXFVGTAQYVSPE 181
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 29/179 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITS----CSSLDS- 716
+F ++G GSF +V+ + + + + R++ N V +T S LD
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 717 ---------KNMEFLALVYEFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDC 759
++ E L + NG L +I R +I SAL+YLH
Sbjct: 71 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK- 129
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++H DLKP NILL+E+M ++ DFG A+ L +S + + F+G+ YV PE
Sbjct: 130 --GIIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXFVGTAQYVSPE 182
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 29/179 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITS----CSSLDS- 716
+F ++G GSF +V+ + + + + R++ N V +T S LD
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 717 ---------KNMEFLALVYEFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDC 759
++ E L + NG L +I R +I SAL+YLH
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK- 127
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++H DLKP NILL+E+M ++ DFG A+ L +S + + F+G+ YV PE
Sbjct: 128 --GIIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXFVGTAQYVSPE 180
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 29/179 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITS----CSSLDS- 716
+F ++G GSF +V+ + + + + R++ N V +T S LD
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 717 ---------KNMEFLALVYEFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDC 759
++ E L + NG L +I R +I SAL+YLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK- 149
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++H DLKP NILL+E+M ++ DFG A+ L +S + + F+G+ YV PE
Sbjct: 150 --GIIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXFVGTAQYVSPE 202
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 29/179 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITS----CSSLDSK 717
+F ++G GSF +V+ + + + + R++ N V +T S LD
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 718 NMEFLALVYE----------FLSNGSLGDWIHG--------ERKNELDITSALDYLHNDC 759
L ++ + NG L +I R +I SAL+YLH
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++H DLKP NILL+E+M ++ DFG A+ L +S + + F+G+ YV PE
Sbjct: 150 ---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANSFVGTAQYVSPE 201
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/195 (28%), Positives = 81/195 (41%), Gaps = 43/195 (22%)
Query: 657 RRATGNFSHENLIGSGSFGSVLHNERTGSWKSFIA------------ECETLRNVRHRNL 704
+R +F LIGSG FG V + K+++ E + L + H N+
Sbjct: 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNI 66
Query: 705 VKLITSCSSLD------SKN-----MEFLALVYEFLSNGSLGDWIHGERKNELD------ 747
V D SKN + L + EF G+L WI R +LD
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 748 ----ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSIS 803
IT +DY+H+ +++ DLKP NI L + K+GDFGL L + D + S
Sbjct: 127 LFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSL--KNDGKRXRS 181
Query: 804 STHVFMGSIGYVPPE 818
G++ Y+ PE
Sbjct: 182 K-----GTLRYMSPE 191
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 31/151 (20%)
Query: 669 IGSGSFGSV--------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLI 708
+G G+FGSV L + + F E E L++++H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------V 761
C S +N L L+ E+L GSL D++ + K +D L Y C+
Sbjct: 96 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK 151
Query: 762 PVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
+H DL NIL++ E K+GDFGL + L
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVL 182
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 31/151 (20%)
Query: 669 IGSGSFGSV--------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLI 708
+G G+FGSV L + + F E E L++++H N+VK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------V 761
C S +N L L+ E+L GSL D++ + K +D L Y C+
Sbjct: 109 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK 164
Query: 762 PVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
+H DL NIL++ E K+GDFGL + L
Sbjct: 165 RYIHRDLATRNILVENENRVKIGDFGLTKVL 195
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 31/151 (20%)
Query: 669 IGSGSFGSV--------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLI 708
+G G+FGSV L + + F E E L++++H N+VK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------V 761
C S +N L L+ E+L GSL D++ + K +D L Y C+
Sbjct: 77 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK 132
Query: 762 PVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
+H DL NIL++ E K+GDFGL + L
Sbjct: 133 RYIHRDLATRNILVENENRVKIGDFGLTKVL 163
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 31/151 (20%)
Query: 669 IGSGSFGSV--------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLI 708
+G G+FGSV L + + F E E L++++H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------V 761
C S +N L L+ E+L GSL D++ + K +D L Y C+
Sbjct: 96 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK 151
Query: 762 PVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
+H DL NIL++ E K+GDFGL + L
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVL 182
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 31/151 (20%)
Query: 669 IGSGSFGSV--------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLI 708
+G G+FGSV L + + F E E L++++H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------V 761
C S +N L L+ E+L GSL D++ + K +D L Y C+
Sbjct: 78 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK 133
Query: 762 PVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
+H DL NIL++ E K+GDFGL + L
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 31/151 (20%)
Query: 669 IGSGSFGSV--------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLI 708
+G G+FGSV L + + F E E L++++H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------V 761
C S +N L L+ E+L GSL D++ + K +D L Y C+
Sbjct: 78 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK 133
Query: 762 PVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
+H DL NIL++ E K+GDFGL + L
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 31/151 (20%)
Query: 669 IGSGSFGSV--------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLI 708
+G G+FGSV L + + F E E L++++H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------V 761
C S +N L L+ E+L GSL D++ + K +D L Y C+
Sbjct: 78 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK 133
Query: 762 PVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
+H DL NIL++ E K+GDFGL + L
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 31/151 (20%)
Query: 669 IGSGSFGSV--------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLI 708
+G G+FGSV L + + F E E L++++H N+VK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------V 761
C S +N L L+ E+L GSL D++ + K +D L Y C+
Sbjct: 85 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK 140
Query: 762 PVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
+H DL NIL++ E K+GDFGL + L
Sbjct: 141 RYIHRDLATRNILVENENRVKIGDFGLTKVL 171
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 31/151 (20%)
Query: 669 IGSGSFGSV--------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLI 708
+G G+FGSV L + + F E E L++++H N+VK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------V 761
C S +N L L+ E+L GSL D++ + K +D L Y C+
Sbjct: 84 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK 139
Query: 762 PVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
+H DL NIL++ E K+GDFGL + L
Sbjct: 140 RYIHRDLATRNILVENENRVKIGDFGLTKVL 170
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 31/151 (20%)
Query: 669 IGSGSFGSV--------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLI 708
+G G+FGSV L + + F E E L++++H N+VK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------V 761
C S +N L L+ E+L GSL D++ + K +D L Y C+
Sbjct: 76 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK 131
Query: 762 PVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
+H DL NIL++ E K+GDFGL + L
Sbjct: 132 RYIHRDLATRNILVENENRVKIGDFGLTKVL 162
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 31/151 (20%)
Query: 669 IGSGSFGSV--------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLI 708
+G G+FGSV L + + F E E L++++H N+VK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------V 761
C S +N L L+ E+L GSL D++ + K +D L Y C+
Sbjct: 83 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK 138
Query: 762 PVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
+H DL NIL++ E K+GDFGL + L
Sbjct: 139 RYIHRDLATRNILVENENRVKIGDFGLTKVL 169
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 31/151 (20%)
Query: 669 IGSGSFGSV--------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLI 708
+G G+FGSV L + + F E E L++++H N+VK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------V 761
C S +N L L+ E+L GSL D++ + K +D L Y C+
Sbjct: 82 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK 137
Query: 762 PVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
+H DL NIL++ E K+GDFGL + L
Sbjct: 138 RYIHRDLATRNILVENENRVKIGDFGLTKVL 168
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 31/151 (20%)
Query: 669 IGSGSFGSV--------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLI 708
+G G+FGSV L + + F E E L++++H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------V 761
C S +N L L+ E+L GSL D++ + K +D L Y C+
Sbjct: 81 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 762 PVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
+H DL NIL++ E K+GDFGL + L
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 68/153 (44%), Gaps = 35/153 (22%)
Query: 669 IGSGSFGSV--------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLI 708
+G G+FGSV L + + F E E L++++H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWI--HGERKNELDITSALDYLHNDCE------ 760
C S +N L L+ E+L GSL D++ H ER +D L Y C+
Sbjct: 81 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQAHAER---IDHIKLLQYTSQICKGMEYLG 134
Query: 761 -VPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
+H DL NIL++ E K+GDFGL + L
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.1 bits (144), Expect = 5e-09, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 29/179 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITS----CSSLDS- 716
+F ++G GSF + + + + + + R++ N V +T S LD
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 717 ---------KNMEFLALVYEFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDC 759
++ E L + NG L +I R +I SAL+YLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK- 149
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++H DLKP NILL+E+M ++ DFG A+ L +S + + F+G+ YV PE
Sbjct: 150 --GIIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXFVGTAQYVSPE 202
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 34/164 (20%)
Query: 654 DELRRATGNFSHENL-----IGSGSFGSVLHNERTG------------SWKSFIAECETL 696
DE R+ + + L IG G FG V+ + G + ++F+AE +
Sbjct: 181 DEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVM 240
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN----------EL 746
+RH NLV+L+ + + L +V E+++ GSL D++ ++ L
Sbjct: 241 TQLRHSNLVQLL----GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL 296
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
D+ A++YL + VH DL N+L+ E+ AKV DFGL +
Sbjct: 297 DVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK 337
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 60.1 bits (144), Expect = 5e-09, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 88/186 (47%), Gaps = 36/186 (19%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V + + G + FI E + + N+ H LV+L C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-- 89
Query: 715 DSKNMEFLALVYEFLSNGSLGDWI----HGERKNEL-----DITSALDYLHNDCEVPVVH 765
+ ++ E+++NG L +++ H + +L D+ A++YL + +H
Sbjct: 90 ---KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 143
Query: 766 SDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERP 825
DL N L++++ KV DFGL+R++L+ + SS+ S + + PPE + +
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EETSSVGSKF----PVRWSPPEVLMYSKF 198
Query: 826 STAGDV 831
S+ D+
Sbjct: 199 SSKSDI 204
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 31/151 (20%)
Query: 669 IGSGSFGSV--------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLI 708
+G G+FGSV L + + F E E L++++H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------V 761
C S +N L L+ EFL GSL +++ + K +D L Y C+
Sbjct: 81 GVCYSAGRRN---LKLIMEFLPYGSLREYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 762 PVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
+H DL NIL++ E K+GDFGL + L
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 43/169 (25%)
Query: 658 RATGNFSHENLIGSGSFGSVL-----------------HNERTGSWKSFIAECETLRNVR 700
R +F ++G G+FG V+ H E S + ++E L ++
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS--TILSEVMLLASLN 60
Query: 701 HRNLVK----------LITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE----- 745
H+ +V+ + +++ K+ F+ + E+ N +L D IH E N+
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQM--EYCENRTLYDLIHSENLNQQRDEY 118
Query: 746 ----LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
I AL Y+H+ ++H DLKP NI +DE K+GDFGLA+
Sbjct: 119 WRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 33/169 (19%)
Query: 649 PKISYDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAEC 693
P +YD+ + + ++ +G G +G V E T + F+ E
Sbjct: 2 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 61
Query: 694 ETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD------ 747
++ ++H NLV+L+ C+ + F ++ EF++ G+L D++ + E++
Sbjct: 62 AVMKEIKHPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLRECNRQEVNAVVLLY 116
Query: 748 ----ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 117 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 162
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 59.3 bits (142), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 33/169 (19%)
Query: 649 PKISYDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAEC 693
P +YD+ + + ++ +G G +G V E T + F+ E
Sbjct: 5 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 64
Query: 694 ETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD------ 747
++ ++H NLV+L+ C+ + F ++ EF++ G+L D++ + E++
Sbjct: 65 AVMKEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLY 119
Query: 748 ----ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 120 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 165
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 59.3 bits (142), Expect = 9e-09, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 88/186 (47%), Gaps = 36/186 (19%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V + + G + FI E + + N+ H LV+L C+
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-- 80
Query: 715 DSKNMEFLALVYEFLSNGSLGDWI----HGERKNEL-----DITSALDYLHNDCEVPVVH 765
+ ++ E+++NG L +++ H + +L D+ A++YL + +H
Sbjct: 81 ---KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 134
Query: 766 SDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERP 825
DL N L++++ KV DFGL+R++L+ + SS+ S + + PPE + +
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGSKF----PVRWSPPEVLMYSKF 189
Query: 826 STAGDV 831
S+ D+
Sbjct: 190 SSKSDI 195
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 59.3 bits (142), Expect = 9e-09, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 88/186 (47%), Gaps = 36/186 (19%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V + + G + FI E + + N+ H LV+L C+
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-- 73
Query: 715 DSKNMEFLALVYEFLSNGSLGDWI----HGERKNEL-----DITSALDYLHNDCEVPVVH 765
+ ++ E+++NG L +++ H + +L D+ A++YL + +H
Sbjct: 74 ---KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 127
Query: 766 SDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERP 825
DL N L++++ KV DFGL+R++L+ + SS+ S + + PPE + +
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGSKF----PVRWSPPEVLMYSKF 182
Query: 826 STAGDV 831
S+ D+
Sbjct: 183 SSKSDI 188
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 59.3 bits (142), Expect = 9e-09, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 88/186 (47%), Gaps = 36/186 (19%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V + + G + FI E + + N+ H LV+L C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-- 74
Query: 715 DSKNMEFLALVYEFLSNGSLGDWI----HGERKNEL-----DITSALDYLHNDCEVPVVH 765
+ ++ E+++NG L +++ H + +L D+ A++YL + +H
Sbjct: 75 ---KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 128
Query: 766 SDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERP 825
DL N L++++ KV DFGL+R++L+ + SS+ S + + PPE + +
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGSKF----PVRWSPPEVLMYSKF 183
Query: 826 STAGDV 831
S+ D+
Sbjct: 184 SSKSDI 189
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 59.3 bits (142), Expect = 9e-09, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 88/186 (47%), Gaps = 36/186 (19%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V + + G + FI E + + N+ H LV+L C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-- 89
Query: 715 DSKNMEFLALVYEFLSNGSLGDWI----HGERKNEL-----DITSALDYLHNDCEVPVVH 765
+ ++ E+++NG L +++ H + +L D+ A++YL + +H
Sbjct: 90 ---KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 143
Query: 766 SDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERP 825
DL N L++++ KV DFGL+R++L+ + SS+ S + + PPE + +
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGSKF----PVRWSPPEVLMYSKF 198
Query: 826 STAGDV 831
S+ D+
Sbjct: 199 SSKSDI 204
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 59.3 bits (142), Expect = 9e-09, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 88/186 (47%), Gaps = 36/186 (19%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V + + G + FI E + + N+ H LV+L C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-- 69
Query: 715 DSKNMEFLALVYEFLSNGSLGDWI----HGERKNEL-----DITSALDYLHNDCEVPVVH 765
+ ++ E+++NG L +++ H + +L D+ A++YL + +H
Sbjct: 70 ---KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 123
Query: 766 SDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERP 825
DL N L++++ KV DFGL+R++L+ + SS+ S + + PPE + +
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGSKF----PVRWSPPEVLMYSKF 178
Query: 826 STAGDV 831
S+ D+
Sbjct: 179 SSKSDI 184
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 59.3 bits (142), Expect = 9e-09, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 88/186 (47%), Gaps = 36/186 (19%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V + + G + FI E + + N+ H LV+L C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-- 74
Query: 715 DSKNMEFLALVYEFLSNGSLGDWI----HGERKNEL-----DITSALDYLHNDCEVPVVH 765
+ ++ E+++NG L +++ H + +L D+ A++YL + +H
Sbjct: 75 ---KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 128
Query: 766 SDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERP 825
DL N L++++ KV DFGL+R++L D++ + S F + + PPE + +
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVL---DDEYTSSRGSKF--PVRWSPPEVLMYSKF 183
Query: 826 STAGDV 831
S+ D+
Sbjct: 184 SSKSDI 189
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 105/267 (39%), Gaps = 47/267 (17%)
Query: 666 ENLIGSGSFGSVLHN------------ERTGSWKSFIAECETLRNVRHRNLVKLITSCSS 713
E ++G G+FG V E K+FI E L V H N+VKL +C
Sbjct: 13 EEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGAC-- 70
Query: 714 LDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHNDCEVP 762
+ + LV E+ GSL + +HG L + + YLH+
Sbjct: 71 -----LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 763 VVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGL 821
++H DLKP N+LL T K+ DFG A D Q+ +++ GS ++ PE
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTA------CDIQTHMTNNK---GSAAWMAPEVFE 176
Query: 822 GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCL 881
G S DV + + I+ W + ++ P R + + L L
Sbjct: 177 GSNYSEKCDVFS-------WGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNL 229
Query: 882 ITIIGSVGLSCTTESPGGRIGIREALR 908
I S+ C ++ P R + E ++
Sbjct: 230 PKPIESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 39/166 (23%)
Query: 655 ELRRATGNFSHENLIGSGSFGSVLHNERTGSWK------------------SFIAECETL 696
EL+R E +GSG FG V + G WK F E +T+
Sbjct: 4 ELKREEITLLKE--LGSGQFGVV----KLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTM 57
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEF-LALVYEFLSNGSLGDWIHGERKNELDITSALDYL 755
+ H LVK CS E+ + +V E++SNG L +++ K L+ + L+
Sbjct: 58 MKLSHPKLVKFYGVCSK------EYPIYIVTEYISNGCLLNYLRSHGKG-LEPSQLLEMC 110
Query: 756 HNDCE-------VPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794
++ CE +H DL N L+D ++ KV DFG+ R++L+
Sbjct: 111 YDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 81/191 (42%), Gaps = 43/191 (22%)
Query: 661 GNFSHENLIGSGSFGSV--LHNERTG----------------SWKSFIAECETLRNVRHR 702
GN+ + IG G+F V + TG S + E ++ + H
Sbjct: 15 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--HGERKNE------LDITSALDY 754
N+VKL + + L LV E+ S G + D++ HG K + I SA+ Y
Sbjct: 75 NIVKLFEVIETEKT-----LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 129
Query: 755 LHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISST-HVFMGSIG 813
H +VH DLK N+LLD +M K+ DFG + N+ ++ + F GS
Sbjct: 130 CHQKY---IVHRDLKAENLLLDGDMNIKIADFGFS--------NEFTVGNKLDTFCGSPP 178
Query: 814 YVPPEYGLGER 824
Y PE G++
Sbjct: 179 YAAPELFQGKK 189
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 31/151 (20%)
Query: 669 IGSGSFGSV--------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLI 708
+G G+FGSV L + + F E E L++++H N+VK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------V 761
C S +N L L+ E+L GSL D++ + K +D L Y C+
Sbjct: 79 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK 134
Query: 762 PVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
+H +L NIL++ E K+GDFGL + L
Sbjct: 135 RYIHRNLATRNILVENENRVKIGDFGLTKVL 165
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 106/267 (39%), Gaps = 47/267 (17%)
Query: 666 ENLIGSGSFGSVLHN------------ERTGSWKSFIAECETLRNVRHRNLVKLITSCSS 713
E ++G G+FG V E K+FI E L V H N+VKL +C
Sbjct: 14 EEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGAC-- 71
Query: 714 LDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHNDCEVP 762
+ + LV E+ GSL + +HG L + + YLH+
Sbjct: 72 -----LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 763 VVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGL 821
++H DLKP N+LL T K+ DFG A D Q+ +++ GS ++ PE
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTA------CDIQTHMTNNK---GSAAWMAPEVFE 177
Query: 822 GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCL 881
G S DV F+ + I+ W + ++ P R + + L L
Sbjct: 178 GSNYSEKCDV-----FS--WGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNL 230
Query: 882 ITIIGSVGLSCTTESPGGRIGIREALR 908
I S+ C ++ P R + E ++
Sbjct: 231 PKPIESLMTRCWSKDPSQRPSMEEIVK 257
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/182 (30%), Positives = 82/182 (45%), Gaps = 41/182 (22%)
Query: 669 IGSGSFGSVLHNERTGS-----WKSF-------------IAECETLRNVRHRNLVKLITS 710
IG+GS+G R WK ++E LR ++H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 711 CSSLDSKNMEFLALVYEFLSNGSLGDWI-HGERKNE-LD----------ITSALDYLH-- 756
+D N L +V E+ G L I G ++ + LD +T AL H
Sbjct: 74 I--IDRTNTT-LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 757 NDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVP 816
+D V+H DLKP N+ LD + K+GDFGLAR L ++ +S + T F+G+ Y+
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL----NHDTSFAKT--FVGTPYYMS 184
Query: 817 PE 818
PE
Sbjct: 185 PE 186
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V G K +F+AE ++ ++H+ LV+L +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 87
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVVHSD 767
E + ++ E++ NGSL D++ +L I LD E +H D
Sbjct: 88 -----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 142
Query: 768 LKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L+ NIL+ + ++ K+ DFGLAR L+E DN+ + F I + PE
Sbjct: 143 LRAANILVSDTLSCKIADFGLAR-LIE--DNEXTAREGAKF--PIKWTAPE 188
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V G K +F+AE ++ ++H+ LV+L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 79
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVVHSD 767
E + ++ E++ NGSL D++ +L I LD E +H D
Sbjct: 80 -----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 768 LKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L+ NIL+ + ++ K+ DFGLAR L+E DN+ + F I + PE
Sbjct: 135 LRAANILVSDTLSCKIADFGLAR-LIE--DNEXTAREGAKF--PIKWTAPE 180
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V G K +F+AE ++ ++H+ LV+L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 79
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVVHSD 767
E + ++ E++ NGSL D++ +L I LD E +H D
Sbjct: 80 -----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 768 LKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L+ NIL+ + ++ K+ DFGLAR L+E DN+ + F I + PE
Sbjct: 135 LRAANILVSDTLSCKIADFGLAR-LIE--DNEXTAREGAKF--PIKWTAPE 180
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V G K +F+AE ++ ++H+ LV+L +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 85
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVVHSD 767
E + ++ E++ NGSL D++ +L I LD E +H D
Sbjct: 86 -----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 768 LKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L+ NIL+ + ++ K+ DFGLAR L+E DN+ + F I + PE
Sbjct: 141 LRAANILVSDTLSCKIADFGLAR-LIE--DNEXTAREGAKF--PIKWTAPE 186
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V G K +F+AE ++ ++H+ LV+L +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 80
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVVHSD 767
E + ++ E++ NGSL D++ +L I LD E +H D
Sbjct: 81 -----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 135
Query: 768 LKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L+ NIL+ + ++ K+ DFGLAR L+E DN+ + F I + PE
Sbjct: 136 LRAANILVSDTLSCKIADFGLAR-LIE--DNEXTAREGAKF--PIKWTAPE 181
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V G K +F+AE ++ ++H+ LV+L +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 81
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVVHSD 767
E + ++ E++ NGSL D++ +L I LD E +H D
Sbjct: 82 -----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 136
Query: 768 LKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L+ NIL+ + ++ K+ DFGLAR L+E DN+ + F I + PE
Sbjct: 137 LRAANILVSDTLSCKIADFGLAR-LIE--DNEXTAREGAKF--PIKWTAPE 182
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V G K +F+AE ++ ++H+ LV+L +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 88
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVVHSD 767
E + ++ E++ NGSL D++ +L I LD E +H D
Sbjct: 89 -----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 143
Query: 768 LKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L+ NIL+ + ++ K+ DFGLAR L+E DN+ + F I + PE
Sbjct: 144 LRAANILVSDTLSCKIADFGLAR-LIE--DNEXTAREGAKF--PIKWTAPE 189
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 33/170 (19%)
Query: 648 HPKISYDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAE 692
H +YD+ + + ++ +G G +G V E T + F+ E
Sbjct: 2 HMSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 61
Query: 693 CETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD----- 747
++ ++H NLV+L+ C+ + F ++ EF++ G+L D++ + E++
Sbjct: 62 AAVMKEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLL 116
Query: 748 -----ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 117 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 163
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 33/170 (19%)
Query: 648 HPKISYDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAE 692
H +YD+ + + ++ +G G +G V E T + F+ E
Sbjct: 2 HMSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 61
Query: 693 CETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD----- 747
++ ++H NLV+L+ C+ + F ++ EF++ G+L D++ + E++
Sbjct: 62 AAVMKEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLL 116
Query: 748 -----ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 117 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 163
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 16/109 (14%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--------HGERK 743
E + L+ RH +++KL S+ + +V E++S G L D+I R+
Sbjct: 66 EIQNLKLFRHPHIIKLYQVISTPSD-----IFMVMEYVSGGELFDYICKNGRLDEKESRR 120
Query: 744 NELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I S +DY H VVH DLKP N+LLD M AK+ DFGL+ +
Sbjct: 121 LFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM 166
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 36/161 (22%)
Query: 661 GNFSHENLIGSGSFGSV--LHNERTGSW-------KSFIA----------ECETLRNVRH 701
GN+ +G GSFG V ++ TG K +A E LR +RH
Sbjct: 4 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 63
Query: 702 RNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--------HGERKNELDITSALD 753
+++KL S D + +V E+ N L D+I R+ I SA++
Sbjct: 64 PHIIKLYDVIKSKDE-----IIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVE 117
Query: 754 YLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794
Y H +VH DLKP N+LLDE + K+ DFGL+ + +
Sbjct: 118 YCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 155
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 38/192 (19%)
Query: 663 FSHENLIGSGSFGSVLHNERTGSWKSFIAEC-----------------ETLRNVRHRNLV 705
F + +G+G+F V+ E + K F +C LR ++H N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 706 KLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-----HGERKNELDITSALDYLHNDCE 760
L S + L LV + +S G L D I + E+ I LD ++
Sbjct: 84 ALEDIYESPNH-----LYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHR 138
Query: 761 VPVVHSDLKPGNILL---DEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPP 817
+ +VH DLKP N+L DEE + DFGL+ +++ + + ST G+ GYV P
Sbjct: 139 MGIVHRDLKPENLLYYSQDEESKIMISDFGLS-----KMEGKGDVMSTAC--GTPGYVAP 191
Query: 818 EYGLGERPSTAG 829
E L ++P +
Sbjct: 192 EV-LAQKPYSKA 202
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V G K +F+AE ++ ++H+ LV+L +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 85
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVVHSD 767
E + ++ E++ NGSL D++ +L I LD E +H D
Sbjct: 86 -----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 768 LKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L+ NIL+ + ++ K+ DFGLAR L+E DN+ + F I + PE
Sbjct: 141 LRAANILVSDTLSCKIADFGLAR-LIE--DNEYTAREGAKF--PIKWTAPE 186
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V G K +F+AE ++ ++H+ LV+L +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 89
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVVHSD 767
E + ++ E++ NGSL D++ +L I LD E +H D
Sbjct: 90 -----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 144
Query: 768 LKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L+ NIL+ + ++ K+ DFGLAR L+E DN+ + F I + PE
Sbjct: 145 LRAANILVSDTLSCKIADFGLAR-LIE--DNEYTAREGAKF--PIKWTAPE 190
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V G K +F+AE ++ ++H+ LV+L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 79
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVVHSD 767
E + ++ E++ NGSL D++ +L I LD E +H D
Sbjct: 80 -----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 768 LKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L+ NIL+ + ++ K+ DFGLAR L+E DN+ + F I + PE
Sbjct: 135 LRAANILVSDTLSCKIADFGLAR-LIE--DNEYTAREGAKF--PIKWTAPE 180
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V G K +F+AE ++ ++H+ LV+L +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 74
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVVHSD 767
E + ++ E++ NGSL D++ +L I LD E +H D
Sbjct: 75 -----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 129
Query: 768 LKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L+ NIL+ + ++ K+ DFGLAR L+E DN+ + F I + PE
Sbjct: 130 LRAANILVSDTLSCKIADFGLAR-LIE--DNEYTAREGAKF--PIKWTAPE 175
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V G K +F+AE ++ ++H+ LV+L +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 84
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVVHSD 767
E + ++ E++ NGSL D++ +L I LD E +H D
Sbjct: 85 -----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 139
Query: 768 LKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L+ NIL+ + ++ K+ DFGLAR L+E DN+ + F I + PE
Sbjct: 140 LRAANILVSDTLSCKIADFGLAR-LIE--DNEYTAREGAKF--PIKWTAPE 185
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 36/161 (22%)
Query: 661 GNFSHENLIGSGSFGSV--LHNERTGSW-------KSFIA----------ECETLRNVRH 701
GN+ +G GSFG V ++ TG K +A E LR +RH
Sbjct: 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 72
Query: 702 RNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--------HGERKNELDITSALD 753
+++KL S D + +V E+ N L D+I R+ I SA++
Sbjct: 73 PHIIKLYDVIKSKDE-----IIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVE 126
Query: 754 YLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794
Y H +VH DLKP N+LLDE + K+ DFGL+ + +
Sbjct: 127 YCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 36/161 (22%)
Query: 661 GNFSHENLIGSGSFGSV--LHNERTGSW-------KSFIA----------ECETLRNVRH 701
GN+ +G GSFG V ++ TG K +A E LR +RH
Sbjct: 14 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 73
Query: 702 RNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--------HGERKNELDITSALD 753
+++KL S D + +V E+ N L D+I R+ I SA++
Sbjct: 74 PHIIKLYDVIKSKDE-----IIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVE 127
Query: 754 YLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794
Y H +VH DLKP N+LLDE + K+ DFGL+ + +
Sbjct: 128 YCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 165
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 36/161 (22%)
Query: 661 GNFSHENLIGSGSFGSV--LHNERTGSW-------KSFIA----------ECETLRNVRH 701
GN+ +G GSFG V ++ TG K +A E LR +RH
Sbjct: 8 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 67
Query: 702 RNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--------HGERKNELDITSALD 753
+++KL S D + +V E+ N L D+I R+ I SA++
Sbjct: 68 PHIIKLYDVIKSKDE-----IIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVE 121
Query: 754 YLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794
Y H +VH DLKP N+LLDE + K+ DFGL+ + +
Sbjct: 122 YCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 159
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 33/166 (19%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAECETL 696
+YD+ + + ++ +G G +G V E T + F+ E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------- 747
+ ++H NLV+L+ C+ + F ++ EF++ G+L D++ + E++
Sbjct: 69 KEIKHPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 748 -ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 166
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 78/174 (44%), Gaps = 37/174 (21%)
Query: 669 IGSGSFGSVLHNERTG---------------SWKSFIAECETLRNVRHRNLVKLITSCSS 713
IGSGSFG+V + G +++F E LR RH N++ L +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFMGYMT 102
Query: 714 LDSKNMEFLALVYEFLSNGSLGDWIH-GERKNEL----DIT----SALDYLHNDCEVPVV 764
D+ LA+V ++ SL +H E K ++ DI +DYLH ++
Sbjct: 103 KDN-----LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN---II 154
Query: 765 HSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
H D+K NI L E +T K+GDFGLA +Q T GS+ ++ PE
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT----GSVLWMAPE 204
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 33/166 (19%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAECETL 696
+YD+ + + ++ +G G +G V E T + F+ E +
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 64
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------- 747
+ ++H NLV+L+ C+ + F ++ EF++ G+L D++ + E++
Sbjct: 65 KEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 748 -ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 120 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 162
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 33/166 (19%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAECETL 696
+YD+ + + ++ +G G +G V E T + F+ E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------- 747
+ ++H NLV+L+ C+ + F ++ EF++ G+L D++ + E++
Sbjct: 69 KEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 748 -ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 166
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 33/166 (19%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAECETL 696
+YD+ + + ++ +G G +G V E T + F+ E +
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 76
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------- 747
+ ++H NLV+L+ C+ + F ++ EF++ G+L D++ + E++
Sbjct: 77 KEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 131
Query: 748 -ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 132 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 174
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 33/166 (19%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAECETL 696
+YD+ + + ++ +G G +G V E T + F+ E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------- 747
+ ++H NLV+L+ C+ + F ++ EF++ G+L D++ + E++
Sbjct: 69 KEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 748 -ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 166
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 33/166 (19%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAECETL 696
+YD+ + + ++ +G G +G V E T + F+ E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------- 747
+ ++H NLV+L+ C+ + F ++ EF++ G+L D++ + E++
Sbjct: 64 KEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 748 -ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 161
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 33/166 (19%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAECETL 696
+YD+ + + ++ +G G +G V E T + F+ E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------- 747
+ ++H NLV+L+ C+ + F ++ EF++ G+L D++ + E++
Sbjct: 64 KEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 748 -ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 161
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 33/166 (19%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAECETL 696
+YD+ + + ++ +G G +G V E T + F+ E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------- 747
+ ++H NLV+L+ C+ + F ++ EF++ G+L D++ + E++
Sbjct: 69 KEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 748 -ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 166
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 33/166 (19%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAECETL 696
+YD+ + + ++ +G G +G V E T + F+ E +
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------- 747
+ ++H NLV+L+ C+ + F ++ EF++ G+L D++ + E++
Sbjct: 66 KEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 748 -ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 121 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 163
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 54/182 (29%), Positives = 77/182 (42%), Gaps = 41/182 (22%)
Query: 669 IGSGSFGSVLHNERTGS-----WKSF-------------IAECETLRNVRHRNLVKLITS 710
IG+GS+G R WK ++E LR ++H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 711 CSSLDSKNMEFLALVYEFLSNGSLGDWI-HGERKNE-LD----------ITSALDYLH-- 756
+D N L +V E+ G L I G ++ + LD +T AL H
Sbjct: 74 I--IDRTNTT-LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 757 NDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVP 816
+D V+H DLKP N+ LD + K+GDFGLAR L S F+G+ Y+
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL------NHDTSFAKAFVGTPYYMS 184
Query: 817 PE 818
PE
Sbjct: 185 PE 186
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 25/151 (16%)
Query: 683 TGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--HG 740
+ S + E ++ + H N+VKL + + L LV E+ S G + D++ HG
Sbjct: 54 SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKT-----LYLVMEYASGGEVFDYLVAHG 108
Query: 741 ERKNE------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794
K + I SA+ Y H +VH DLK N+LLD +M K+ DFG +
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS----- 160
Query: 795 RVDNQSSISST-HVFMGSIGYVPPEYGLGER 824
N+ + + F GS Y PE G++
Sbjct: 161 ---NEFTFGNKLDTFCGSPPYAAPELFQGKK 188
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 33/166 (19%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAECETL 696
+YD+ + + ++ +G G +G V E T + F+ E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------- 747
+ ++H NLV+L+ C+ + F ++ EF++ G+L D++ + E+
Sbjct: 64 KEIKHPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 748 -ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 161
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 33/166 (19%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAECETL 696
+YD+ + + ++ +G G +G V E T + F+ E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------- 747
+ ++H NLV+L+ C+ + F ++ EF++ G+L D++ + E+
Sbjct: 64 KEIKHPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 748 -ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 161
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 25/151 (16%)
Query: 683 TGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--HG 740
+ S + E ++ + H N+VKL + + L LV E+ S G + D++ HG
Sbjct: 54 SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKT-----LYLVMEYASGGEVFDYLVAHG 108
Query: 741 ERKNE------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794
K + I SA+ Y H +VH DLK N+LLD +M K+ DFG +
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS----- 160
Query: 795 RVDNQSSISST-HVFMGSIGYVPPEYGLGER 824
N+ + + F GS Y PE G++
Sbjct: 161 ---NEFTFGNKLDTFCGSPPYAAPELFQGKK 188
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 25/151 (16%)
Query: 683 TGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--HG 740
+ S + E ++ + H N+VKL + + L LV E+ S G + D++ HG
Sbjct: 54 SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKT-----LYLVMEYASGGEVFDYLVAHG 108
Query: 741 ERKNE------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794
K + I SA+ Y H +VH DLK N+LLD +M K+ DFG +
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS----- 160
Query: 795 RVDNQSSISST-HVFMGSIGYVPPEYGLGER 824
N+ + + F GS Y PE G++
Sbjct: 161 ---NEFTFGNKLDTFCGSPPYAAPELFQGKK 188
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 666 ENLIGSGSFGSVL---HNERTG-----------SWKSFIAECETLRNVRHRNLVKLITSC 711
E +G+G FG V +N+ T S ++F+AE ++ ++H LVKL
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 252
Query: 712 SSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVV 764
+ E + ++ EF++ GSL D++ + ++ + +D+ E +
Sbjct: 253 TK------EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYI 306
Query: 765 HSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
H DL+ NIL+ + K+ DFGLAR + DN+ + F I + PE
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVI---EDNEYTAREGAKF--PIKWTAPE 355
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 33/166 (19%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAECETL 696
+YD+ + + ++ +G G +G V E T + F+ E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------- 747
+ ++H NLV+L+ C+ + F ++ EF++ G+L D++ + E+
Sbjct: 64 KEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 748 -ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 161
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 41/191 (21%)
Query: 656 LRRATGN-FSHENLIGSGSFGSVL--HNERTGSWKSF-----------------IAECET 695
+ R T N F + L+G G+FG V+ + TG + + + E
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 62
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD-------- 747
L+N RH L L S + D L V E+ + G L + ER D
Sbjct: 63 LQNSRHPFLTALKYSFQTHDR-----LCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 117
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I SALDYLH+ E VV+ DLK N++LD++ K+ DFGL + E + + +++
Sbjct: 118 IVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKX--- 169
Query: 808 FMGSIGYVPPE 818
F G+ Y+ PE
Sbjct: 170 FCGTPEYLAPE 180
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 33/166 (19%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAECETL 696
+YD+ + + ++ +G G +G V E T + F+ E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------- 747
+ ++H NLV+L+ C+ + F ++ EF++ G+L D++ + E+
Sbjct: 64 KEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 748 -ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 161
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 33/166 (19%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAECETL 696
+YD+ + + ++ +G G +G V E T + F+ E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------- 747
+ ++H NLV+L+ C+ + F ++ EF++ G+L D++ + E+
Sbjct: 69 KEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 123
Query: 748 -ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 166
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 33/167 (19%)
Query: 651 ISYDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAECET 695
+S D+ + + ++ +G G FG V E T + F+ E
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 60
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD-------- 747
++ ++H NLV+L+ C+ + F ++ EF++ G+L D++ + E+
Sbjct: 61 MKEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQEVSAVVLLYMA 115
Query: 748 --ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 116 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 159
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 86/189 (45%), Gaps = 41/189 (21%)
Query: 658 RATGN-FSHENLIGSGSFGSVL--HNERTGSWKSF-----------------IAECETLR 697
R T N F + L+G G+FG V+ + TG + + + E L+
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 203
Query: 698 NVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------IT 749
N RH L L S + D L V E+ + G L + ER D I
Sbjct: 204 NSRHPFLTALKYSFQTHDR-----LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 258
Query: 750 SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFM 809
SALDYLH+ E VV+ DLK N++LD++ K+ DFGL + E + + +++ + F
Sbjct: 259 SALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKT---FC 310
Query: 810 GSIGYVPPE 818
G+ Y+ PE
Sbjct: 311 GTPEYLAPE 319
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 86/189 (45%), Gaps = 41/189 (21%)
Query: 658 RATGN-FSHENLIGSGSFGSVL--HNERTGSWKSF-----------------IAECETLR 697
R T N F + L+G G+FG V+ + TG + + + E L+
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 206
Query: 698 NVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------IT 749
N RH L L S + D L V E+ + G L + ER D I
Sbjct: 207 NSRHPFLTALKYSFQTHDR-----LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 261
Query: 750 SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFM 809
SALDYLH+ E VV+ DLK N++LD++ K+ DFGL + E + + +++ + F
Sbjct: 262 SALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKT---FC 313
Query: 810 GSIGYVPPE 818
G+ Y+ PE
Sbjct: 314 GTPEYLAPE 322
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 85/189 (44%), Gaps = 41/189 (21%)
Query: 658 RATGN-FSHENLIGSGSFGSVL--HNERTGSWKSF-----------------IAECETLR 697
R T N F + L+G G+FG V+ + TG + + + E L+
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 698 NVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------IT 749
N RH L L S + D L V E+ + G L + ER D I
Sbjct: 66 NSRHPFLTALKYSFQTHDR-----LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 120
Query: 750 SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFM 809
SALDYLH+ E VV+ DLK N++LD++ K+ DFGL + E + + +++ F
Sbjct: 121 SALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKX---FC 172
Query: 810 GSIGYVPPE 818
G+ Y+ PE
Sbjct: 173 GTPEYLAPE 181
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 25/149 (16%)
Query: 685 SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--HGER 742
S + E ++ + H N+VKL + + L L+ E+ S G + D++ HG
Sbjct: 54 SLQKLFREVRIMKILNHPNIVKLFEVIETEKT-----LYLIMEYASGGEVFDYLVAHGRM 108
Query: 743 KNE------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796
K + I SA+ Y H +VH DLK N+LLD +M K+ DFG +
Sbjct: 109 KEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFS------- 158
Query: 797 DNQSSISST-HVFMGSIGYVPPEYGLGER 824
N+ ++ F GS Y PE G++
Sbjct: 159 -NEFTVGGKLDTFCGSPPYAAPELFQGKK 186
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 85/189 (44%), Gaps = 41/189 (21%)
Query: 658 RATGN-FSHENLIGSGSFGSVL--HNERTGSWKSF-----------------IAECETLR 697
R T N F + L+G G+FG V+ + TG + + + E L+
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 698 NVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------IT 749
N RH L L S + D L V E+ + G L + ER D I
Sbjct: 64 NSRHPFLTALKYSFQTHDR-----LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 118
Query: 750 SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFM 809
SALDYLH+ E VV+ DLK N++LD++ K+ DFGL + E + + +++ F
Sbjct: 119 SALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKX---FC 170
Query: 810 GSIGYVPPE 818
G+ Y+ PE
Sbjct: 171 GTPEYLAPE 179
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 27/148 (18%)
Query: 666 ENLIGSGSFGSV---LHNERTG-----------SWKSFIAECETLRNVRHRNLVKLITSC 711
E +G+G FG V +N+ T S ++F+AE ++ ++H LVKL
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 79
Query: 712 SSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVV 764
+ E + ++ EF++ GSL D++ + ++ + +D+ E +
Sbjct: 80 TK------EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYI 133
Query: 765 HSDLKPGNILLDEEMTAKVGDFGLARFL 792
H DL+ NIL+ + K+ DFGLAR +
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVI 161
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 43/169 (25%)
Query: 658 RATGNFSHENLIGSGSFGSVL-----------------HNERTGSWKSFIAECETLRNVR 700
R +F ++G G+FG V+ H E S + ++E L ++
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS--TILSEVXLLASLN 60
Query: 701 HRNLVK----------LITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE----- 745
H+ +V+ + +++ K+ F+ E+ N +L D IH E N+
Sbjct: 61 HQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQX--EYCENRTLYDLIHSENLNQQRDEY 118
Query: 746 ----LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
I AL Y+H+ ++H +LKP NI +DE K+GDFGLA+
Sbjct: 119 WRLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 11/106 (10%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSA 751
E E LRN+ H N+VK C+ D N + L+ EFL +GSL +++ + KN++++
Sbjct: 61 EIEILRNLYHENIVKYKGICTE-DGGNG--IKLIMEFLPSGSLKEYL-PKNKNKINLKQQ 116
Query: 752 LDYLHNDCE-------VPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L Y C+ VH DL N+L++ E K+GDFGL +
Sbjct: 117 LKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTK 162
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 11/106 (10%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSA 751
E E LRN+ H N+VK C+ D N + L+ EFL +GSL +++ + KN++++
Sbjct: 73 EIEILRNLYHENIVKYKGICTE-DGGNG--IKLIMEFLPSGSLKEYL-PKNKNKINLKQQ 128
Query: 752 LDYLHNDCE-------VPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L Y C+ VH DL N+L++ E K+GDFGL +
Sbjct: 129 LKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTK 174
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 82/185 (44%), Gaps = 42/185 (22%)
Query: 662 NFSHENLIGSGSFGSVL----------HNERTGSWKSFIAECET----------LRNVRH 701
+F +IG GSFG VL + + K+ + + E L+NV+H
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 702 RNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITSALD 753
LV L S + D L V ++++ G L + E R +I SAL
Sbjct: 99 PFLVGLHFSFQTADK-----LYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALG 153
Query: 754 YLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIG 813
YLH+ + +V+ DLKP NILLD + + DFGL + +N S+T F G+
Sbjct: 154 YLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCK------ENIEHNSTTSTFCGTPE 204
Query: 814 YVPPE 818
Y+ PE
Sbjct: 205 YLAPE 209
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 25/151 (16%)
Query: 683 TGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--HG 740
+ S + E ++ + H N+VKL + + L LV E+ S G + D++ HG
Sbjct: 54 SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKT-----LYLVMEYASGGEVFDYLVAHG 108
Query: 741 ERKNE------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794
K + I SA+ Y H +VH DLK N+LLD +M K+ DFG +
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS----- 160
Query: 795 RVDNQSSISST-HVFMGSIGYVPPEYGLGER 824
N+ + + F G+ Y PE G++
Sbjct: 161 ---NEFTFGNKLDAFCGAPPYAAPELFQGKK 188
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 27/146 (18%)
Query: 666 ENLIGSGSFGSVL---HNERTG-----------SWKSFIAECETLRNVRHRNLVKLITSC 711
E +G+G FG V +N+ T S ++F+AE ++ ++H LVKL
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 246
Query: 712 SSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVV 764
+ E + ++ EF++ GSL D++ + ++ + +D+ E +
Sbjct: 247 TK------EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYI 300
Query: 765 HSDLKPGNILLDEEMTAKVGDFGLAR 790
H DL+ NIL+ + K+ DFGLAR
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLAR 326
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 25/151 (16%)
Query: 683 TGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--HG 740
+ S + E ++ + H N+VKL + + L LV E+ S G + D++ HG
Sbjct: 54 SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKT-----LYLVMEYASGGEVFDYLVAHG 108
Query: 741 ERKNE------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794
K + I SA+ Y H +VH DLK N+LLD +M K+ DFG +
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS----- 160
Query: 795 RVDNQSSISST-HVFMGSIGYVPPEYGLGER 824
N+ + + F GS Y PE G++
Sbjct: 161 ---NEFTFGNKLDEFCGSPPYAAPELFQGKK 188
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 27/145 (18%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V G K +F+AE ++ ++H+ LV+L +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 75
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVVHSD 767
E + ++ E++ NGSL D++ +L I LD E +H +
Sbjct: 76 -----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRN 130
Query: 768 LKPGNILLDEEMTAKVGDFGLARFL 792
L+ NIL+ + ++ K+ DFGLAR +
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLI 155
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 25/149 (16%)
Query: 685 SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--HGER 742
S + E ++ + H N+VKL + + L L+ E+ S G + D++ HG
Sbjct: 57 SLQKLFREVRIMKILNHPNIVKLFEVIETEKT-----LYLIMEYASGGEVFDYLVAHGRM 111
Query: 743 KNE------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796
K + I SA+ Y H +VH DLK N+LLD +M K+ DFG +
Sbjct: 112 KEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFS------- 161
Query: 797 DNQSSISST-HVFMGSIGYVPPEYGLGER 824
N+ ++ F G+ Y PE G++
Sbjct: 162 -NEFTVGGKLDAFCGAPPYAAPELFQGKK 189
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 25/151 (16%)
Query: 683 TGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--HG 740
+ S + E ++ + H N+VKL + + L LV E+ S G + D++ HG
Sbjct: 47 SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKT-----LYLVMEYASGGEVFDYLVAHG 101
Query: 741 ERKNE------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794
K + I SA+ Y H +VH DLK N+LLD +M K+ DFG +
Sbjct: 102 WMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS----- 153
Query: 795 RVDNQSSISST-HVFMGSIGYVPPEYGLGER 824
N+ + + F GS Y PE G++
Sbjct: 154 ---NEFTFGNKLDTFCGSPPYAAPELFQGKK 181
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 38/187 (20%)
Query: 669 IGSGSFGSVLHNERTGSWK--------------SFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V G+ K SF+ E + ++ ++H LV+L S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE- 75
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIH-GERK-----NELD----ITSALDYLHNDCEVPVV 764
E + +V E+++ GSL D++ GE + N +D + + + Y+ + +
Sbjct: 76 -----EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYI 127
Query: 765 HSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER 824
H DL+ NIL+ + K+ DFGLAR L+E DN+ + F I + PE L R
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLAR-LIE--DNEXTARQGAKF--PIKWTAPEAALYGR 182
Query: 825 PSTAGDV 831
+ DV
Sbjct: 183 FTIKSDV 189
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 13/112 (11%)
Query: 688 SFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD 747
+F+AE ++ ++H+ LV+L + E + ++ E++ NGSL D++ +L
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLT 107
Query: 748 ITSALDYLHNDCE-------VPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I LD E +H DL+ NIL+ + ++ K+ DFGLAR +
Sbjct: 108 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 159
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 35/163 (21%)
Query: 655 ELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAECETLRNV 699
E+ R H+ +G G +G V E T + F+ E ++ +
Sbjct: 7 EMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 64
Query: 700 RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD----------IT 749
+H NLV+L+ C+ + F ++ EF++ G+L D++ + E+ I+
Sbjct: 65 KHPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 119
Query: 750 SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 120 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 159
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 14/116 (12%)
Query: 724 LVYEFLSNGSLGDWIHGE------RKNEL--DITSALDYLHNDCEVPVVHSDLKPGNILL 775
+V E++ +L D +H E R E+ D AL++ H + ++H D+KP NI++
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMI 166
Query: 776 DEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
KV DFG+AR + D+ +S++ T +G+ Y+ PE G+ DV
Sbjct: 167 SATNAVKVMDFGIARAI---ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 219
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 33/167 (19%)
Query: 651 ISYDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAECET 695
+S D+ + + ++ +G G +G V E T + F+ E
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 60
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD-------- 747
++ ++H NLV+L+ C+ + F ++ EF++ G+L D++ + E+
Sbjct: 61 MKEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQEVSAVVLLYMA 115
Query: 748 --ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 116 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 159
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/182 (29%), Positives = 77/182 (42%), Gaps = 41/182 (22%)
Query: 669 IGSGSFGSVLHNERTGS-----WKSF-------------IAECETLRNVRHRNLVKLITS 710
IG+GS+G R WK ++E LR ++H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 711 CSSLDSKNMEFLALVYEFLSNGSLGDWI-HGERKNE-LD----------ITSALDYLH-- 756
+D N L +V E+ G L I G ++ + LD +T AL H
Sbjct: 74 I--IDRTNTT-LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 757 NDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVP 816
+D V+H DLKP N+ LD + K+GDFGLAR L D F+G+ Y+
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKE------FVGTPYYMS 184
Query: 817 PE 818
PE
Sbjct: 185 PE 186
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 45/186 (24%)
Query: 662 NFSHENLIGSGSFGSVL--HNERTGSWKSF-----------------IAECETLRNVRHR 702
+F + L+G G+FG V+ + TG + + + E L+N RH
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSAL 752
L L + + D L V E+ + G L + H R+ +I SAL
Sbjct: 66 FLTALKYAFQTHDR-----LCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSAL 118
Query: 753 DYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSI 812
+YLH+ VV+ D+K N++LD++ K+ DFGL + + S ++ F G+
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK------EGISDGATMKTFCGTP 169
Query: 813 GYVPPE 818
Y+ PE
Sbjct: 170 EYLAPE 175
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 45/186 (24%)
Query: 662 NFSHENLIGSGSFGSVL--HNERTGSWKSF-----------------IAECETLRNVRHR 702
+F + L+G G+FG V+ + TG + + + E L+N RH
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 68
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSAL 752
L L + + D L V E+ + G L + H R+ +I SAL
Sbjct: 69 FLTALKYAFQTHDR-----LCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSAL 121
Query: 753 DYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSI 812
+YLH+ VV+ D+K N++LD++ K+ DFGL + + S ++ F G+
Sbjct: 122 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK------EGISDGATMKTFCGTP 172
Query: 813 GYVPPE 818
Y+ PE
Sbjct: 173 EYLAPE 178
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 45/186 (24%)
Query: 662 NFSHENLIGSGSFGSVL--HNERTGSWKSF-----------------IAECETLRNVRHR 702
+F + L+G G+FG V+ + TG + + + E L+N RH
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSAL 752
L L + + D L V E+ + G L + H R+ +I SAL
Sbjct: 66 FLTALKYAFQTHDR-----LCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSAL 118
Query: 753 DYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSI 812
+YLH+ VV+ D+K N++LD++ K+ DFGL + + S ++ F G+
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK------EGISDGATMKTFCGTP 169
Query: 813 GYVPPE 818
Y+ PE
Sbjct: 170 EYLAPE 175
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 14/116 (12%)
Query: 724 LVYEFLSNGSLGDWIHGE------RKNEL--DITSALDYLHNDCEVPVVHSDLKPGNILL 775
+V E++ +L D +H E R E+ D AL++ H + ++H D+KP NI++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 149
Query: 776 DEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
KV DFG+AR + D+ +S++ T +G+ Y+ PE G+ DV
Sbjct: 150 SATNAVKVMDFGIARAI---ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 14/116 (12%)
Query: 724 LVYEFLSNGSLGDWIHGE------RKNEL--DITSALDYLHNDCEVPVVHSDLKPGNILL 775
+V E++ +L D +H E R E+ D AL++ H + ++H D+KP NI++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 149
Query: 776 DEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
KV DFG+AR + D+ +S++ T +G+ Y+ PE G+ DV
Sbjct: 150 SATNAVKVMDFGIARAI---ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/213 (27%), Positives = 88/213 (41%), Gaps = 51/213 (23%)
Query: 666 ENLIGSGSFGSVLHNERTGSWK--------------------SFIAECETLRNVRHRNLV 705
E +IG+G FG V K F++E + H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 706 KLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE------------LDITSALD 753
+L + + +M + L EF+ NG+L ++ R N+ I S +
Sbjct: 79 RL----EGVVTNSMPVMILT-EFMENGALDSFL---RLNDGQFTVIQLVGMLRGIASGMR 130
Query: 754 YLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIG 813
YL E+ VH DL NIL++ + KV DFGL+RFL E + + SS +G G
Sbjct: 131 YL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSS----LG--G 181
Query: 814 YVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
+P + E + A TS S A + IV W
Sbjct: 182 KIPIRWTAPE--AIAFRKFTSASDAWSYGIVMW 212
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 45/186 (24%)
Query: 662 NFSHENLIGSGSFGSVL--HNERTGSWKSF-----------------IAECETLRNVRHR 702
+F + L+G G+FG V+ + TG + + + E L+N RH
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSAL 752
L L + + D L V E+ + G L + H R+ +I SAL
Sbjct: 66 FLTALKYAFQTHDR-----LCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSAL 118
Query: 753 DYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSI 812
+YLH+ VV+ D+K N++LD++ K+ DFGL + + S ++ F G+
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK------EGISDGATMKXFCGTP 169
Query: 813 GYVPPE 818
Y+ PE
Sbjct: 170 EYLAPE 175
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 14/116 (12%)
Query: 724 LVYEFLSNGSLGDWIHGE------RKNEL--DITSALDYLHNDCEVPVVHSDLKPGNILL 775
+V E++ +L D +H E R E+ D AL++ H + ++H D+KP NI++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 149
Query: 776 DEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
KV DFG+AR + D+ +S++ T +G+ Y+ PE G+ DV
Sbjct: 150 SATNAVKVMDFGIARAI---ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 45/186 (24%)
Query: 662 NFSHENLIGSGSFGSVL--HNERTGSWKSF-----------------IAECETLRNVRHR 702
+F + L+G G+FG V+ + TG + + + E L+N RH
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSAL 752
L L + + D L V E+ + G L + H R+ +I SAL
Sbjct: 66 FLTALKYAFQTHDR-----LCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSAL 118
Query: 753 DYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSI 812
+YLH+ VV+ D+K N++LD++ K+ DFGL + + S ++ F G+
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK------EGISDGATMKXFCGTP 169
Query: 813 GYVPPE 818
Y+ PE
Sbjct: 170 EYLAPE 175
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 27/151 (17%)
Query: 685 SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIH----- 739
S + E + + H N+V TS D L LV + LS GS+ D I
Sbjct: 51 SMDELLKEIQAMSQCHHPNIVSYYTSFVVKDE-----LWLVMKLLSGGSVLDIIKHIVAK 105
Query: 740 GERKNEL-----------DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788
GE K+ + ++ L+YLH + ++ H D+K GNILL E+ + ++ DFG+
Sbjct: 106 GEHKSGVLDESTIATILREVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGV 162
Query: 789 ARFLLERVD-NQSSISSTHVFMGSIGYVPPE 818
+ FL D ++ + T F+G+ ++ PE
Sbjct: 163 SAFLATGGDITRNKVRKT--FVGTPCWMAPE 191
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 27/151 (17%)
Query: 685 SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIH----- 739
S + E + + H N+V TS D L LV + LS GS+ D I
Sbjct: 56 SMDELLKEIQAMSQCHHPNIVSYYTSFVVKDE-----LWLVMKLLSGGSVLDIIKHIVAK 110
Query: 740 GERKNEL-----------DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788
GE K+ + ++ L+YLH + ++ H D+K GNILL E+ + ++ DFG+
Sbjct: 111 GEHKSGVLDESTIATILREVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGV 167
Query: 789 ARFLLERVD-NQSSISSTHVFMGSIGYVPPE 818
+ FL D ++ + T F+G+ ++ PE
Sbjct: 168 SAFLATGGDITRNKVRKT--FVGTPCWMAPE 196
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 14/116 (12%)
Query: 724 LVYEFLSNGSLGDWIHGE------RKNEL--DITSALDYLHNDCEVPVVHSDLKPGNILL 775
+V E++ +L D +H E R E+ D AL++ H + ++H D+KP NI++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 149
Query: 776 DEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
KV DFG+AR + D+ +S++ T +G+ Y+ PE G+ DV
Sbjct: 150 SATNAVKVMDFGIARAI---ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 49/215 (22%)
Query: 667 NLIGSGSFGSV---------------------LHNERTGSWKSFIAECETLRNVRHRNLV 705
++G G FGSV L N + F++E +++ H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 706 KLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER--------------KNELDITSA 751
+L+ C + S+ + ++ F+ G L ++ R K +DI
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 752 LDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGS 811
++YL N +H DL N +L ++MT V DFGL++ + S + G
Sbjct: 160 MEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKI---------YSGDYYRQGR 207
Query: 812 IGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
I +P ++ E S A V TS+S F + W
Sbjct: 208 IAKMPVKWIAIE--SLADRVYTSKSDVWAFGVTMW 240
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 14/116 (12%)
Query: 724 LVYEFLSNGSLGDWIHGE------RKNEL--DITSALDYLHNDCEVPVVHSDLKPGNILL 775
+V E++ +L D +H E R E+ D AL++ H + ++H D+KP NIL+
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANILI 149
Query: 776 DEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
KV DFG+AR + D+ +S+ T +G+ Y+ PE G+ DV
Sbjct: 150 SATNAVKVVDFGIARAI---ADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDV 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 45/186 (24%)
Query: 662 NFSHENLIGSGSFGSVL--HNERTGSWKSF-----------------IAECETLRNVRHR 702
+F + L+G G+FG V+ + TG + + + E L+N RH
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 70
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSAL 752
L L + + D L V E+ + G L + H R+ +I SAL
Sbjct: 71 FLTALKYAFQTHDR-----LCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSAL 123
Query: 753 DYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSI 812
+YLH+ VV+ D+K N++LD++ K+ DFGL + + S ++ F G+
Sbjct: 124 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK------EGISDGATMKXFCGTP 174
Query: 813 GYVPPE 818
Y+ PE
Sbjct: 175 EYLAPE 180
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 45/186 (24%)
Query: 662 NFSHENLIGSGSFGSVL--HNERTGSWKSF-----------------IAECETLRNVRHR 702
+F + L+G G+FG V+ + TG + + + E L+N RH
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSAL 752
L L + + D L V E+ + G L + H R+ +I SAL
Sbjct: 66 FLTALKYAFQTHDR-----LCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSAL 118
Query: 753 DYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSI 812
+YLH+ VV+ D+K N++LD++ K+ DFGL + + S ++ F G+
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK------EGISDGATMKXFCGTP 169
Query: 813 GYVPPE 818
Y+ PE
Sbjct: 170 EYLAPE 175
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 34/185 (18%)
Query: 669 IGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLITS 710
IG G+FG V + NE+ G + + E + L+ ++H N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 711 CSSLDS---KNMEFLALVYEFLSNGSLG-------DWIHGERKNELD-ITSALDYLHNDC 759
C + S + + LV++F + G + E K + + + L Y+H +
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN- 144
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
++H D+K N+L+ + K+ DFGLAR ++Q + V ++ Y PPE
Sbjct: 145 --KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV--TLWYRPPEL 200
Query: 820 GLGER 824
LGER
Sbjct: 201 LLGER 205
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 36/182 (19%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVR----------HRNLVKLITS- 710
+FS +IG G FG V + + K + +C + ++ R ++ L+++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 711 ------CSSLDSKNMEFLALVYEFLSNGSLGDWI--HG------ERKNELDITSALDYLH 756
C S + L+ + + ++ G L + HG R +I L+++H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 757 NDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVP 816
N VV+ DLKP NILLDE ++ D GLA S H +G+ GY+
Sbjct: 310 NRF---VVYRDLKPANILLDEHGHVRISDLGLA--------CDFSKKKPHASVGTHGYMA 358
Query: 817 PE 818
PE
Sbjct: 359 PE 360
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 36/182 (19%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVR----------HRNLVKLITS- 710
+FS +IG G FG V + + K + +C + ++ R ++ L+++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 711 ------CSSLDSKNMEFLALVYEFLSNGSLGDWI--HG------ERKNELDITSALDYLH 756
C S + L+ + + ++ G L + HG R +I L+++H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 757 NDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVP 816
N VV+ DLKP NILLDE ++ D GLA S H +G+ GY+
Sbjct: 310 NRF---VVYRDLKPANILLDEHGHVRISDLGLA--------CDFSKKKPHASVGTHGYMA 358
Query: 817 PE 818
PE
Sbjct: 359 PE 360
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 36/182 (19%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVR----------HRNLVKLITS- 710
+FS +IG G FG V + + K + +C + ++ R ++ L+++
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 248
Query: 711 ------CSSLDSKNMEFLALVYEFLSNGSLGDWI--HG------ERKNELDITSALDYLH 756
C S + L+ + + ++ G L + HG R +I L+++H
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 308
Query: 757 NDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVP 816
N VV+ DLKP NILLDE ++ D GLA S H +G+ GY+
Sbjct: 309 NRF---VVYRDLKPANILLDEHGHVRISDLGLA--------CDFSKKKPHASVGTHGYMA 357
Query: 817 PE 818
PE
Sbjct: 358 PE 359
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 36/182 (19%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVR----------HRNLVKLITS- 710
+FS +IG G FG V + + K + +C + ++ R ++ L+++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 711 ------CSSLDSKNMEFLALVYEFLSNGSLGDWI--HG------ERKNELDITSALDYLH 756
C S + L+ + + ++ G L + HG R +I L+++H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 757 NDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVP 816
N VV+ DLKP NILLDE ++ D GLA S H +G+ GY+
Sbjct: 310 NRF---VVYRDLKPANILLDEHGHVRISDLGLA--------CDFSKKKPHASVGTHGYMA 358
Query: 817 PE 818
PE
Sbjct: 359 PE 360
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 48/193 (24%)
Query: 663 FSHENLIGSGSFGSVL--HNERT---------------GSWKSFIAECETLRNVRHRNLV 705
+ +++G+G+F V+ ++RT G S E L ++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 706 KLITSCSSLDS--KNMEFLALVYEFLSNGSLGDWI-----HGERKNELDITSALD---YL 755
+LD ++ L L+ + +S G L D I + ER I LD YL
Sbjct: 80 -------ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 756 HNDCEVPVVHSDLKPGNIL---LDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSI 812
H ++ +VH DLKP N+L LDE+ + DFGL+ ++++ S+ ST G+
Sbjct: 133 H---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-----KMEDPGSVLSTAC--GTP 182
Query: 813 GYVPPEYGLGERP 825
GYV PE L ++P
Sbjct: 183 GYVAPEV-LAQKP 194
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 33/165 (20%)
Query: 653 YDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAECETLR 697
YD+ + + ++ +G G +G V E T + F+ E ++
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 268
Query: 698 NVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD---------- 747
++H NLV+L+ C+ ++ EF++ G+L D++ + E++
Sbjct: 269 EIKHPNLVQLLGVCTREPP-----FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 323
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H +L N L+ E KV DFGL+R +
Sbjct: 324 ISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLM 365
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 33/165 (20%)
Query: 653 YDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAECETLR 697
YD+ + + ++ +G G +G V E T + F+ E ++
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 310
Query: 698 NVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD---------- 747
++H NLV+L+ C+ ++ EF++ G+L D++ + E++
Sbjct: 311 EIKHPNLVQLLGVCTREPP-----FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 365
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H +L N L+ E KV DFGL+R +
Sbjct: 366 ISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLM 407
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 80/199 (40%), Gaps = 46/199 (23%)
Query: 666 ENLIGSGSFGSVLHNERTGSWKSFIAE--------CETLRNVR----------HRNLVKL 707
E +IG G FG V G + A +T+ NVR H N++ L
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCE 760
C L N L LV EF G L + G+R + I ++YLH++
Sbjct: 72 RGVC--LKEPN---LCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAI 126
Query: 761 VPVVHSDLKPGNILLDEEM--------TAKVGDFGLARFLLERVDNQSSISSTHVFMGSI 812
VP++H DLK NIL+ +++ K+ DFGLAR R S+ G+
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-EWHRTTKMSA-------AGAY 178
Query: 813 GYVPPEYGLGERPSTAGDV 831
++ PE S DV
Sbjct: 179 AWMAPEVIRASMFSKGSDV 197
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 34/185 (18%)
Query: 669 IGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLITS 710
IG G+FG V + NE+ G + + E + L+ ++H N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 711 CSSLDS---KNMEFLALVYEFLSNGSLG-------DWIHGERKNELD-ITSALDYLHNDC 759
C + S + + LV++F + G + E K + + + L Y+H +
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN- 144
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
++H D+K N+L+ + K+ DFGLAR ++Q + V ++ Y PPE
Sbjct: 145 --KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV--TLWYRPPEL 200
Query: 820 GLGER 824
LGER
Sbjct: 201 LLGER 205
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 26/145 (17%)
Query: 669 IGSGSFGSV---LHNERTG-----------SWKSFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V +N T S ++F+ E ++ ++H LV+L +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT-- 77
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVVHSD 767
E + ++ EF++ GSL D++ + ++ + +D+ E +H D
Sbjct: 78 ---KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRD 134
Query: 768 LKPGNILLDEEMTAKVGDFGLARFL 792
L+ N+L+ E + K+ DFGLAR +
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVI 159
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 34/185 (18%)
Query: 669 IGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLITS 710
IG G+FG V + NE+ G + + E + L+ ++H N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 711 CSSLDS---KNMEFLALVYEFLSNGSLG-------DWIHGERKNELD-ITSALDYLHNDC 759
C + S + + LV++F + G + E K + + + L Y+H +
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN- 144
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
++H D+K N+L+ + K+ DFGLAR ++Q + V ++ Y PPE
Sbjct: 145 --KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV--TLWYRPPEL 200
Query: 820 GLGER 824
LGER
Sbjct: 201 LLGER 205
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 33/165 (20%)
Query: 653 YDELRRATGNFSHENLIGSGSFGSVLH---------------NERTGSWKSFIAECETLR 697
YD+ + + ++ +G G +G V E T + F+ E ++
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 271
Query: 698 NVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------D 747
++H NLV+L+ C+ ++ EF++ G+L D++ + E+
Sbjct: 272 EIKHPNLVQLLGVCTREPP-----FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 326
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H +L N L+ E KV DFGL+R +
Sbjct: 327 ISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLM 368
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 34/185 (18%)
Query: 669 IGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLITS 710
IG G+FG V + NE+ G + + E + L+ ++H N+V LI
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 711 CSSLDS---KNMEFLALVYEFLSNGSLG-------DWIHGERKNELD-ITSALDYLHNDC 759
C + S + + LV++F + G + E K + + + L Y+H +
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN- 143
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
++H D+K N+L+ + K+ DFGLAR ++Q + V ++ Y PPE
Sbjct: 144 --KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV--TLWYRPPEL 199
Query: 820 GLGER 824
LGER
Sbjct: 200 LLGER 204
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 55/215 (25%)
Query: 666 ENLIGSGSFGSVL----------------------HNERTGSWKSFIAECETLRNVRHRN 703
E +IG+G FG V + ER + F++E + H N
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR--REFLSEASIMGQFEHPN 78
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE------------LDITSA 751
+++L + + +M + L EF+ NG+L ++ R N+ I S
Sbjct: 79 IIRL----EGVVTNSMPVMILT-EFMENGALDSFL---RLNDGQFTVIQLVGMLRGIASG 130
Query: 752 LDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGS 811
+ YL E+ VH DL NIL++ + KV DFGL+RFL E + + SS +G
Sbjct: 131 MRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSS----LG- 182
Query: 812 IGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
G +P + E + A TS S A + IV W
Sbjct: 183 -GKIPIRWTAPE--AIAFRKFTSASDAWSYGIVMW 214
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 36/159 (22%)
Query: 666 ENLIGSGSFGSVLHNE--------------------RTGSWKSFIAECETLRNVRHRNLV 705
+ +IG G FG V H E ++F+ E +R + H N++
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 706 KLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE---------LDITSALDYLH 756
LI L + + + L Y + +G L +I ++N L + ++YL
Sbjct: 86 ALIGIM--LPPEGLPHVLLPY--MCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL- 140
Query: 757 NDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795
E VH DL N +LDE T KV DFGLAR +L+R
Sbjct: 141 --AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 43/167 (25%)
Query: 655 ELRRATGNFSHENLIGSGSFGSVLHNERTGSWK-------------------SFIAECET 695
E+ R H+ +G G +G V G WK F+ E
Sbjct: 28 EMERTDITMKHK--LGGGQYGEVY----VGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 81
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL--------- 746
++ ++H NLV+L+ C+ L+ +V E++ G+L D++ + E+
Sbjct: 82 MKEIKHPNLVQLLGVCT-LEPP----FYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMA 136
Query: 747 -DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I+SA++YL +H DL N L+ E KV DFGL+R +
Sbjct: 137 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLM 180
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 15/126 (11%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE------ 745
E +R+ H N+V + +S D L +V EFL G+L D + R NE
Sbjct: 92 EVVIMRDYHHDNVVDMYSSYLVGDE-----LWVVMEFLEGGALTDIVTHTRMNEEQIATV 146
Query: 746 -LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISS 804
L + AL YLHN V+H D+K +ILL + K+ DFG + + V + +
Sbjct: 147 CLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVG 203
Query: 805 THVFMG 810
T +M
Sbjct: 204 TPYWMA 209
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 52.8 bits (125), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 9/72 (12%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
++ ALD+LH+ + +++ DLKP NILLDEE K+ DFGL++ E +D++ S
Sbjct: 135 ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYS-- 186
Query: 807 VFMGSIGYVPPE 818
F G++ Y+ PE
Sbjct: 187 -FCGTVEYMAPE 197
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 52.8 bits (125), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 9/72 (12%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
++ ALD+LH+ + +++ DLKP NILLDEE K+ DFGL++ E +D++ S
Sbjct: 134 ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYS-- 185
Query: 807 VFMGSIGYVPPE 818
F G++ Y+ PE
Sbjct: 186 -FCGTVEYMAPE 196
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 22/135 (16%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK-NELDITS 750
E + L V H +VKL + + L L+ +FL G L + E E D+
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKF 130
Query: 751 -------ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSIS 803
ALD+LH+ + +++ DLKP NILLDEE K+ DFGL++ E +D++
Sbjct: 131 YLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAY 184
Query: 804 STHVFMGSIGYVPPE 818
S F G++ Y+ PE
Sbjct: 185 S---FCGTVEYMAPE 196
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 36/157 (22%)
Query: 668 LIGSGSFGSVLHNE--------------------RTGSWKSFIAECETLRNVRHRNLVKL 707
+IG G FG V H G F+ E +++ H N++ L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE---------LDITSALDYLHND 758
+ C L S+ + L Y + +G L ++I E N L + + YL +
Sbjct: 115 LGIC--LRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 170
Query: 759 CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795
VH DL N +LDE+ T KV DFGLAR + ++
Sbjct: 171 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 204
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 36/157 (22%)
Query: 668 LIGSGSFGSVLHNE--------------------RTGSWKSFIAECETLRNVRHRNLVKL 707
+IG G FG V H G F+ E +++ H N++ L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE---------LDITSALDYLHND 758
+ C L S+ + L Y + +G L ++I E N L + + YL +
Sbjct: 116 LGIC--LRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 171
Query: 759 CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795
VH DL N +LDE+ T KV DFGLAR + ++
Sbjct: 172 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 205
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 36/158 (22%)
Query: 667 NLIGSGSFGSVLHNE--------------------RTGSWKSFIAECETLRNVRHRNLVK 706
+IG G FG V H G F+ E +++ H N++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 707 LITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE---------LDITSALDYLHN 757
L+ C L S+ + L Y + +G L ++I E N L + + YL +
Sbjct: 88 LLGIC--LRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 143
Query: 758 DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795
VH DL N +LDE+ T KV DFGLAR + ++
Sbjct: 144 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 178
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 36/157 (22%)
Query: 668 LIGSGSFGSVLHNE--------------------RTGSWKSFIAECETLRNVRHRNLVKL 707
+IG G FG V H G F+ E +++ H N++ L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE---------LDITSALDYLHND 758
+ C L S+ + L Y + +G L ++I E N L + + YL +
Sbjct: 96 LGIC--LRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 151
Query: 759 CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795
VH DL N +LDE+ T KV DFGLAR + ++
Sbjct: 152 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 185
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 36/158 (22%)
Query: 667 NLIGSGSFGSVLHNE--------------------RTGSWKSFIAECETLRNVRHRNLVK 706
+IG G FG V H G F+ E +++ H N++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 707 LITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE---------LDITSALDYLHN 757
L+ C L S+ + L Y + +G L ++I E N L + + YL +
Sbjct: 93 LLGIC--LRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 148
Query: 758 DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795
VH DL N +LDE+ T KV DFGLAR + ++
Sbjct: 149 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 183
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 36/157 (22%)
Query: 668 LIGSGSFGSVLHNE--------------------RTGSWKSFIAECETLRNVRHRNLVKL 707
+IG G FG V H G F+ E +++ H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE---------LDITSALDYLHND 758
+ C L S+ + L Y + +G L ++I E N L + + YL +
Sbjct: 97 LGIC--LRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 152
Query: 759 CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795
VH DL N +LDE+ T KV DFGLAR + ++
Sbjct: 153 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 186
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 683 TGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--HG 740
+ S + E + + H N+VKL + + L LV E+ S G + D++ HG
Sbjct: 54 SSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKT-----LYLVXEYASGGEVFDYLVAHG 108
Query: 741 ERKNE------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794
K + I SA+ Y H +VH DLK N+LLD + K+ DFG +
Sbjct: 109 RXKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFS----- 160
Query: 795 RVDNQSSISST-HVFMGSIGYVPPEYGLGER 824
N+ + + F G+ Y PE G++
Sbjct: 161 ---NEFTFGNKLDAFCGAPPYAAPELFQGKK 188
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 36/157 (22%)
Query: 668 LIGSGSFGSVLHNE--------------------RTGSWKSFIAECETLRNVRHRNLVKL 707
+IG G FG V H G F+ E +++ H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE---------LDITSALDYLHND 758
+ C L S+ + L Y + +G L ++I E N L + + YL +
Sbjct: 97 LGIC--LRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 152
Query: 759 CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795
VH DL N +LDE+ T KV DFGLAR + ++
Sbjct: 153 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 186
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 36/157 (22%)
Query: 668 LIGSGSFGSVLHNE--------------------RTGSWKSFIAECETLRNVRHRNLVKL 707
+IG G FG V H G F+ E +++ H N++ L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE---------LDITSALDYLHND 758
+ C L S+ + L Y + +G L ++I E N L + + YL +
Sbjct: 96 LGIC--LRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 151
Query: 759 CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795
VH DL N +LDE+ T KV DFGLAR + ++
Sbjct: 152 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 185
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 36/157 (22%)
Query: 668 LIGSGSFGSVLHNE--------------------RTGSWKSFIAECETLRNVRHRNLVKL 707
+IG G FG V H G F+ E +++ H N++ L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE---------LDITSALDYLHND 758
+ C L S+ + L Y + +G L ++I E N L + + +L +
Sbjct: 98 LGIC--LRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 153
Query: 759 CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795
VH DL N +LDE+ T KV DFGLAR +L++
Sbjct: 154 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDK 187
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 26/145 (17%)
Query: 669 IGSGSFGSV---LHNERTG-----------SWKSFIAECETLRNVRHRNLVKLITSCSSL 714
+G+G FG V +N T S ++F+ E ++ ++H LV+L +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT-- 78
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVVHSD 767
E + ++ E+++ GSL D++ + ++ + +D+ E +H D
Sbjct: 79 ---REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRD 135
Query: 768 LKPGNILLDEEMTAKVGDFGLARFL 792
L+ N+L+ E + K+ DFGLAR +
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVI 160
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 55/190 (28%), Positives = 82/190 (43%), Gaps = 44/190 (23%)
Query: 663 FSHENLIGSGSFGSVLHNERTGSWKSFIAEC----------------ETLRNVRHRNLVK 706
F ++GSG+F V ++ + K F +C L+ ++H N+V
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVT 70
Query: 707 LITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-----HGERKNEL---DITSALDYLHND 758
L S LV + +S G L D I + E+ L + SA+ YLH
Sbjct: 71 LEDIYES-----TTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLH-- 123
Query: 759 CEVPVVHSDLKPGNILL---DEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYV 815
E +VH DLKP N+L +E + DFGL++ Q+ I ST G+ GYV
Sbjct: 124 -ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM------EQNGIMSTAC--GTPGYV 174
Query: 816 PPEYGLGERP 825
PE L ++P
Sbjct: 175 APEV-LAQKP 183
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 77/205 (37%), Gaps = 49/205 (23%)
Query: 645 KVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNE-------------------RTGS 685
K P + Y+ L NF E IG G F V +
Sbjct: 20 KALRPDMGYNTL----ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKA 75
Query: 686 WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE 745
I E + L+ + H N++K S + N +V E G L I +K +
Sbjct: 76 RADCIKEIDLLKQLNHPNVIKYYASFIEDNELN-----IVLELADAGDLSRMIKHFKKQK 130
Query: 746 ------------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
+ + SAL+++H+ V+H D+KP N+ + K+GD GL RF
Sbjct: 131 RLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF- 186
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
S ++ H +G+ Y+ PE
Sbjct: 187 -----SSKTTAAHSLVGTPYYMSPE 206
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 36/157 (22%)
Query: 664 SHENL--IGSGSFGSVL--HNERTG---SWKSFIA-------------ECETLRNVRHRN 703
+ENL +G GS+G V+ N+ TG + K F+ E + L+ +RH N
Sbjct: 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHEN 85
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDW--------IHGERKNELDITSALDYL 755
LV L+ C K + LV+EF+ + L D +K I + + +
Sbjct: 86 LVNLLEVC-----KKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFC 140
Query: 756 HNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
H+ ++H D+KP NIL+ + K+ DFG AR L
Sbjct: 141 HSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTL 174
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 36/158 (22%)
Query: 667 NLIGSGSFGSVLHNE--------------------RTGSWKSFIAECETLRNVRHRNLVK 706
+IG G FG V H G F+ E +++ H N++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 707 LITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE---------LDITSALDYLHN 757
L+ C L S+ + L Y + +G L ++I E N L + + YL +
Sbjct: 91 LLGIC--LRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 146
Query: 758 DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795
VH DL N +LDE+ T KV DFGLAR + ++
Sbjct: 147 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 36/158 (22%)
Query: 667 NLIGSGSFGSVLHNE--------------------RTGSWKSFIAECETLRNVRHRNLVK 706
+IG G FG V H G F+ E +++ H N++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 707 LITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE---------LDITSALDYLHN 757
L+ C L S+ + L Y + +G L ++I E N L + + YL +
Sbjct: 94 LLGIC--LRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 149
Query: 758 DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795
VH DL N +LDE+ T KV DFGLAR + ++
Sbjct: 150 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 184
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 68
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 69 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKXQ 120
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR 173
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 416 GIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPE 475
G+P+ + L L ++ LS N IS NF SL + I GN+ K L
Sbjct: 289 GLPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHL-----YIRGNVKK--LHLGVG 341
Query: 476 EISRLENVVTIDLSDNSLSGNLPNS--LKNCKSLEELLMAYNQFSGPIPNIVAELKGLEV 533
+ +L N+ T+DLS N + + S LKN L+ L +++N+ G E LE+
Sbjct: 342 CLEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLEL 401
Query: 534 LDLSSNKLSGSIP-SDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVHL 583
LDL+ +L + P S QNL L+ LNLT+ F + SN HL
Sbjct: 402 LDLAFTRLHINAPQSPFQNLHFLQVLNLTY-----------CFLDTSNQHL 441
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 149/365 (40%), Gaps = 57/365 (15%)
Query: 243 DVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTY 302
++ DTLPN +F+ F+ ++HN T +++ +T L + F +
Sbjct: 23 EIPDTLPNTTEFL----EFSFNFLPTIHNRTFSRLMNLTFLDLTRCQINWIHEDTFQSHH 78
Query: 303 NIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGG 362
+ +V +G+ TSL L +L L + N N L LYLG
Sbjct: 79 QLS--TLVLTGNPLIFMAETSLNGPKSLKHLFLIQTGISNLEFIPVHNLEN-LESLYLGS 135
Query: 363 NHIYG-KIPASIGRLRSLTLLDLSYNSISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSL 421
NHI K P R+L +LD N+I + I SL
Sbjct: 136 NHISSIKFPKDFPA-RNLKVLDFQNNAI---------------------HYISREDMRSL 173
Query: 422 ANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLE 481
L+ ++ +GN + G I G F S + L+ G P L + L+
Sbjct: 174 EQAINLS-LNFNGNNVKG---IELGAFDSTIFQSLN----FGGTPN-----LSVIFNGLQ 220
Query: 482 NVVTI--------DLSDNSLSGNLPNSLKNCK-SLEELLMAYNQFSGPIPNIVAELKGLE 532
N T D+ D +S + L C+ S+E L + ++FS L+
Sbjct: 221 NSTTQSLWLGTFEDIDDEDISSAMLKGL--CEMSVESLNLQEHRFSDISSTTFQCFTQLQ 278
Query: 533 VLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVP-SEGIFRNMSNVHLKGN-PKLC 590
LDL++ L G +PS ++ L L+ L L+ N+ + + S F ++++++++GN KL
Sbjct: 279 ELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHLYIRGNVKKLH 337
Query: 591 LQLGC 595
L +GC
Sbjct: 338 LGVGC 342
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 117/315 (37%), Gaps = 49/315 (15%)
Query: 192 IPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNL 251
+PS + L LK L L++N + N SL HL + N + + L NL
Sbjct: 290 LPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHLYIRGNVKKLHLGVGCLEKLGNL 349
Query: 252 LDFIYCFNRFTGKIPGSLH--NLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKI 309
N SL NL+++Q + ++HN G P L ++ F ++
Sbjct: 350 QTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRL 409
Query: 310 VSSGDD---EGLSFITSLTNSTHLNYLALD--GNQFEGKIPESIGNFSNELSKLYLGGNH 364
+ + L F+ L L Y LD +P L L L GNH
Sbjct: 410 HINAPQSPFQNLHFLQVLN----LTYCFLDTSNQHLLAGLP--------VLRHLNLKGNH 457
Query: 365 IYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANL 424
L+++ L++ S G + I+ + +L
Sbjct: 458 FQDGTITKTNLLQTVGSLEVLILSSCGLLSID---------------------QQAFHSL 496
Query: 425 KKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVV 484
K++ +DLS N LT + S + + + ++L+ N IN P+ L P+ + S
Sbjct: 497 GKMSHVDLSHNSLTCDSIDSLSHLKGIY-LNLAANSINIISPR--LLPILSQQS------ 547
Query: 485 TIDLSDNSLSGNLPN 499
TI+LS N L N
Sbjct: 548 TINLSHNPLDCTCSN 562
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 97 LRSIQLQNNKLSGN--LPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANK 154
L+++ L +N + + ++ NL L+ LN+S N G + +L++LDL +
Sbjct: 349 LQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTR 408
Query: 155 ITGRVTDDQLRNLRSLQVLNF 175
+ +NL LQVLN
Sbjct: 409 LHINAPQSPFQNLHFLQVLNL 429
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 17/120 (14%)
Query: 682 RTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--H 739
R+G WK E + LR + H +++K C K+++ LV E++ GSL D++ H
Sbjct: 60 RSG-WKQ---EIDILRTLYHEHIIKYKGCCEDQGEKSLQ---LVMEYVPLGSLRDYLPRH 112
Query: 740 GERKNEL-----DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794
+L I + YLH+ +H +L N+LLD + K+GDFGLA+ + E
Sbjct: 113 SIGLAQLLLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE 169
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 47/211 (22%)
Query: 666 ENLIGSGSFGSVL--HNERTGSWKSFIAECETLRN----VRHRNLVKLITSCSSLDSKNM 719
E +IG+G FG V H + G + F+A +TL++ + R+ + + D N+
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVA-IKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 96
Query: 720 EFLA----------LVYEFLSNGSLGDWIHGERKNELDIT------------SALDYLHN 757
L ++ EF+ NGSL ++ R+N+ T + + YL
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTVIQLVGMLRGIAAGMKYL-- 151
Query: 758 DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGS--IGYV 815
++ VH DL NIL++ + KV DFGL+RFL D+ S + T G I +
Sbjct: 152 -ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL---EDDTSDPTYTSALGGKIPIRWT 207
Query: 816 PPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
PE + ++A DV + IV W
Sbjct: 208 APEAIQYRKFTSASDV-------WSYGIVMW 231
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 26/138 (18%)
Query: 691 AECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL---- 746
AE L V+H +V LI + + L L+ E+LS G L ++ ER+
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTGGK-----LYLILEYLSGGEL--FMQLEREGIFMEDT 122
Query: 747 ------DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQS 800
+I+ AL +LH +++ DLKP NI+L+ + K+ DFGL + ++
Sbjct: 123 ACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK------ESIH 173
Query: 801 SISSTHVFMGSIGYVPPE 818
+ TH F G+I Y+ PE
Sbjct: 174 DGTVTHTFCGTIEYMAPE 191
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 28 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 79
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 80 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 131
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 132 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR 184
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 40 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 91
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 92 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 143
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 144 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 40 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 91
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 92 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 143
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 144 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 17/122 (13%)
Query: 680 NERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI- 738
R+G WK E + LR + H +++K C + +++ LV E++ GSL D++
Sbjct: 75 QHRSG-WKQ---EIDILRTLYHEHIIKYKGCCEDAGAASLQ---LVMEYVPLGSLRDYLP 127
Query: 739 -HGERKNEL-----DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
H +L I + YLH +H DL N+LLD + K+GDFGLA+ +
Sbjct: 128 RHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184
Query: 793 LE 794
E
Sbjct: 185 PE 186
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 88
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 89 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 140
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 80
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 81 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 132
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 80
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 81 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 132
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 73
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 74 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 125
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 36 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 87
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 88 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 139
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 140 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 192
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 44/195 (22%)
Query: 663 FSHENLIGSGSFGSVL--HNERT---------------GSWKSFIAECETLRNVRHRNLV 705
+ +++G+G+F V+ ++RT G S E L ++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 706 KLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-----HGERKNE---LDITSALDYLHN 757
L S L L+ + +S G L D I + ER + A+ YLH+
Sbjct: 80 ALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 758 DCEVPVVHSDLKPGNIL---LDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGY 814
+ +VH DLKP N+L LDE+ + DFGL+ ++++ S+ ST G+ GY
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-----KMEDPGSVLSTAC--GTPGY 184
Query: 815 VPPEYGLGERPSTAG 829
V PE L ++P +
Sbjct: 185 VAPEV-LAQKPYSKA 198
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------KPFQSIIHAKRT- 80
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 81 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 132
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 68
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 69 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 120
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 68
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 69 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 120
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 68
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 69 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 120
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 68
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 69 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKXQ 120
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 70
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 71 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 122
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 75
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 76 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 127
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 65
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 66 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 117
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 15 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 66
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 67 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 118
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 119 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 171
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 28 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 79
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 80 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 131
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 132 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 184
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 70
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 71 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 122
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 22/135 (16%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK-NELDITS 750
E + L +V H +VKL + + L L+ +FL G L + E E D+
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKF 134
Query: 751 -------ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSIS 803
LD+LH+ + +++ DLKP NILLDEE K+ DFGL++ E +D++
Sbjct: 135 YLAELALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKKAY 188
Query: 804 STHVFMGSIGYVPPE 818
S F G++ Y+ PE
Sbjct: 189 S---FCGTVEYMAPE 200
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 26/138 (18%)
Query: 691 AECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL---- 746
AE L V+H +V LI + + L L+ E+LS G L ++ ER+
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTGGK-----LYLILEYLSGGEL--FMQLEREGIFMEDT 122
Query: 747 ------DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQS 800
+I+ AL +LH +++ DLKP NI+L+ + K+ DFGL + ++
Sbjct: 123 ACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK------ESIH 173
Query: 801 SISSTHVFMGSIGYVPPE 818
+ TH F G+I Y+ PE
Sbjct: 174 DGTVTHXFCGTIEYMAPE 191
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 68
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 69 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 120
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 74
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 75 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 126
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 68
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 69 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 120
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 64
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 65 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 116
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 75
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 76 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 127
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 68
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 69 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 120
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 73
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 74 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 125
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 65
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 66 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 117
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 70
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 71 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 122
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR 175
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 75
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 76 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 127
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 36/157 (22%)
Query: 668 LIGSGSFGSVLHNE--------------------RTGSWKSFIAECETLRNVRHRNLVKL 707
+IG G FG V H G F+ E +++ H N++ L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE---------LDITSALDYLHND 758
+ C L S+ + L Y + +G L ++I E N L + + +L +
Sbjct: 156 LGIC--LRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 211
Query: 759 CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795
VH DL N +LDE+ T KV DFGLAR + ++
Sbjct: 212 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 70
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 71 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 122
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 44/195 (22%)
Query: 663 FSHENLIGSGSFGSVL--HNERT---------------GSWKSFIAECETLRNVRHRNLV 705
+ +++G+G+F V+ ++RT G S E L ++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 706 KLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-----HGERKNE---LDITSALDYLHN 757
L S L L+ + +S G L D I + ER + A+ YLH+
Sbjct: 80 ALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 758 DCEVPVVHSDLKPGNIL---LDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGY 814
+ +VH DLKP N+L LDE+ + DFGL+ ++++ S+ ST G+ GY
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-----KMEDPGSVLSTAC--GTPGY 184
Query: 815 VPPEYGLGERPSTAG 829
V PE L ++P +
Sbjct: 185 VAPEV-LAQKPYSKA 198
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 75
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 76 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 127
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 106/257 (41%), Gaps = 58/257 (22%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--HG---- 740
K F E E L N++H ++VK C D L +V+E++ +G L ++ HG
Sbjct: 62 KDFQREAELLTNLQHEHIVKFYGVCGDGDP-----LIMVFEYMKHGDLNKFLRAHGPDAM 116
Query: 741 --------ERKNEL----------DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAK 782
+ K EL I S + YL + VH DL N L+ + K
Sbjct: 117 ILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVK 173
Query: 783 VGDFGLARFLLERVDNQSSISSTHVF------MGSIGYVPPEYGLGERPSTAGDVPTSES 836
+GDFG++R + ST + M I ++PPE + + +T DV +
Sbjct: 174 IGDFGMSR----------DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS--- 220
Query: 837 FAGEFNIVKW-VESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTE 895
F ++ W + + + Q+ + E+ + +T + + ++ + V L C
Sbjct: 221 ----FGVILWEIFTYGKQPWFQLSNTEVIECIT--QGRVLERPRVCPKEVYDVMLGCWQR 274
Query: 896 SPGGRIGIREALRRLKS 912
P R+ I+E + L +
Sbjct: 275 EPQQRLNIKEIYKILHA 291
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 68
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 69 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 120
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 74
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 75 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 126
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR 179
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 68
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 69 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 120
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 68
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 69 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 120
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 73
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 74 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 125
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 16 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 67
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 68 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 119
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 120 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 172
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 44/195 (22%)
Query: 663 FSHENLIGSGSFGSVL--HNERT---------------GSWKSFIAECETLRNVRHRNLV 705
+ +++G+G+F V+ ++RT G S E L ++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 706 KLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-----HGERKNE---LDITSALDYLHN 757
L S L L+ + +S G L D I + ER + A+ YLH+
Sbjct: 80 ALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 758 DCEVPVVHSDLKPGNIL---LDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGY 814
+ +VH DLKP N+L LDE+ + DFGL+ ++++ S+ ST G+ GY
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-----KMEDPGSVLSTAC--GTPGY 184
Query: 815 VPPEYGLGERPSTAG 829
V PE L ++P +
Sbjct: 185 VAPEV-LAQKPYSKA 198
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + +G A VC + LR A S F S++H +RT
Sbjct: 22 IWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 73
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 74 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 125
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 17/120 (14%)
Query: 682 RTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--H 739
R+G WK E + LR + H +++K C K+++ LV E++ GSL D++ H
Sbjct: 60 RSG-WKQ---EIDILRTLYHEHIIKYKGCCEDQGEKSLQ---LVMEYVPLGSLRDYLPRH 112
Query: 740 GERKNEL-----DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794
+L I + YLH +H +L N+LLD + K+GDFGLA+ + E
Sbjct: 113 SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE 169
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 36/165 (21%)
Query: 657 RRATGNFSHENLIGSGSFGSVL----HNERTGSWKSFIA---------------ECETLR 697
+R G + +G GSFG V + + FI+ E L+
Sbjct: 5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLK 64
Query: 698 NVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------IT 749
+RH +++KL ++ + +V E+ + G L D+I +++ D I
Sbjct: 65 LLRHPHIIKLYDVITTPTD-----IVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQII 118
Query: 750 SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794
A++Y H +VH DLKP N+LLD+ + K+ DFGL+ + +
Sbjct: 119 CAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 36/157 (22%)
Query: 668 LIGSGSFGSVLHNE--------------------RTGSWKSFIAECETLRNVRHRNLVKL 707
+IG G FG V H G F+ E +++ H N++ L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE---------LDITSALDYLHND 758
+ C L S+ + L Y + +G L ++I E N L + + +L +
Sbjct: 98 LGIC--LRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 153
Query: 759 CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795
VH DL N +LDE+ T KV DFGLAR + ++
Sbjct: 154 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 187
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 37/157 (23%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE----------RKNELDITSALD 753
+VKL+ + ++N L LV+EFLS L D++ + + L
Sbjct: 66 IVKLL---DVIHTENK--LYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 754 YLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 21/136 (15%)
Query: 691 AECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-HGERKNELD-- 747
E E L+N+RH+++ +L L++ N F+ L E+ G L D+I +R +E +
Sbjct: 57 TEIEALKNLRHQHICQLY---HVLETANKIFMVL--EYCPGGELFDYIISQDRLSEEETR 111
Query: 748 -----ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSI 802
I SA+ Y+H+ H DLKP N+L DE K+ DFGL D
Sbjct: 112 VVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT 168
Query: 803 SSTHVFMGSIGYVPPE 818
GS+ Y PE
Sbjct: 169 CC-----GSLAYAAPE 179
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 36/157 (22%)
Query: 668 LIGSGSFGSVLHNE--------------------RTGSWKSFIAECETLRNVRHRNLVKL 707
+IG G FG V H G F+ E +++ H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE---------LDITSALDYLHND 758
+ C L S+ + L Y + +G L ++I E N L + + +L +
Sbjct: 97 LGIC--LRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 759 CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795
VH DL N +LDE+ T KV DFGLAR + ++
Sbjct: 153 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 186
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 79/167 (47%), Gaps = 24/167 (14%)
Query: 667 NLIGSGSFGSVLHNERTGSWKSFI-AECETLRNVR-HRNLVKLITSCSSLDSKNMEFLAL 724
NLI S + + ++ G +S + E E L + HRN+++LI D L
Sbjct: 34 NLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDR-----FYL 88
Query: 725 VYEFLSNGSLGDWIHGERK-NEL-------DITSALDYLHNDCEVPVVHSDLKPGNILLD 776
V+E + GS+ IH R NEL D+ SALD+LHN + H DLKP NIL +
Sbjct: 89 VFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCE 145
Query: 777 ---EEMTAKVGDFGLARFLLERVDNQSSISSTHVF--MGSIGYVPPE 818
+ K+ DFGL + D S IS+ + GS Y+ PE
Sbjct: 146 HPNQVSPVKICDFGLGSGIKLNGDC-SPISTPELLTPCGSAEYMAPE 191
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 36/157 (22%)
Query: 668 LIGSGSFGSVLHNE--------------------RTGSWKSFIAECETLRNVRHRNLVKL 707
+IG G FG V H G F+ E +++ H N++ L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE---------LDITSALDYLHND 758
+ C L S+ + L Y + +G L ++I E N L + + +L +
Sbjct: 102 LGIC--LRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 157
Query: 759 CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795
VH DL N +LDE+ T KV DFGLAR + ++
Sbjct: 158 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 191
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 74
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 75 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 126
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 37/157 (23%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE----------RKNELDITSALD 753
+VKL+ + ++N L LV+EFLS L D++ + + L
Sbjct: 67 IVKLL---DVIHTENK--LYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 754 YLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 36/157 (22%)
Query: 668 LIGSGSFGSVLHNE--------------------RTGSWKSFIAECETLRNVRHRNLVKL 707
+IG G FG V H G F+ E +++ H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE---------LDITSALDYLHND 758
+ C L S+ + L Y + +G L ++I E N L + + +L +
Sbjct: 97 LGIC--LRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 759 CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795
VH DL N +LDE+ T KV DFGLAR + ++
Sbjct: 153 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 186
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 25/151 (16%)
Query: 685 SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--R 742
SW+S E + ++H NL++ I + + +E L L+ F GSL D++ G
Sbjct: 53 SWQS-EREIFSTPGMKHENLLQFIAAEKRGSNLEVE-LWLITAFHDKGSLTDYLKGNIIT 110
Query: 743 KNEL-----DITSALDYLHNDCEVP----------VVHSDLKPGNILLDEEMTAKVGDFG 787
NEL ++ L YLH D VP + H D K N+LL ++TA + DFG
Sbjct: 111 WNELCHVAETMSRGLSYLHED--VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFG 168
Query: 788 LARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
LA R + TH +G+ Y+ PE
Sbjct: 169 LAV----RFEPGKPPGDTHGQVGTRRYMAPE 195
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 44/179 (24%)
Query: 669 IGSGSFGSVL-------HNER-----------TGSWKSFIAECETLRNVRHRNLVKLITS 710
+GSG++G VL H ER T S + E L+ + H N++KL
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 711 CSSLDSKNMEFLALVYEFLSNGSLGDWI-HGERKNELD-------ITSALDYLHNDCEVP 762
D +N LV E G L D I H + NE+D + S + YLH
Sbjct: 105 FE--DKRN---YYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---N 156
Query: 763 VVHSDLKPGNILL---DEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
+VH DLKP N+LL +++ K+ DFGL+ +NQ + +G+ Y+ PE
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF----ENQKKMKER---LGTAYYIAPE 208
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 36/157 (22%)
Query: 668 LIGSGSFGSVLHNE--------------------RTGSWKSFIAECETLRNVRHRNLVKL 707
+IG G FG V H G F+ E +++ H N++ L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE---------LDITSALDYLHND 758
+ C L S+ + L Y + +G L ++I E N L + + +L +
Sbjct: 95 LGIC--LRSEGSPLVVLPY--MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 150
Query: 759 CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795
VH DL N +LDE+ T KV DFGLAR + ++
Sbjct: 151 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 184
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 667 NLIGSGSFGSVLHNERTGSWKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNMEFLALV 725
++ G GSF + E ++ + E + LR V H N+++L + + F LV
Sbjct: 51 DVTGGGSFSA---EEVQELREATLKEVDILRKVSGHPNIIQLKDT-----YETNTFFFLV 102
Query: 726 YEFLSNGSLGDWIH-----GERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMT 780
++ + G L D++ E++ + + L+ + ++ +VH DLKP NILLD++M
Sbjct: 103 FDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN 162
Query: 781 AKVGDFGLA 789
K+ DFG +
Sbjct: 163 IKLTDFGFS 171
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 667 NLIGSGSFGSVLHNERTGSWKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNMEFLALV 725
++ G GSF + E ++ + E + LR V H N+++L + + F LV
Sbjct: 51 DVTGGGSFSA---EEVQELREATLKEVDILRKVSGHPNIIQLKDT-----YETNTFFFLV 102
Query: 726 YEFLSNGSLGDWIH-----GERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMT 780
++ + G L D++ E++ + + L+ + ++ +VH DLKP NILLD++M
Sbjct: 103 FDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN 162
Query: 781 AKVGDFGLA 789
K+ DFG +
Sbjct: 163 IKLTDFGFS 171
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 34/172 (19%)
Query: 669 IGSGSFGSV-----LHNERTGSWKSFIAECET-LRNVRHRNLVKLITSCSSL-------- 714
+G+GSFG V HN R + K E L+ V H N +L+ S +
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 715 DSKNMEFLALVYEFLSNGSLGDWIHGERK--------NELDITSALDYLHNDCEVPVVHS 766
++ + + ++ +++ G L + ++ ++ AL+YLH+ +++
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYR 130
Query: 767 DLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
DLKP NILLD+ K+ DFG A+++ + T+ G+ Y+ PE
Sbjct: 131 DLKPENILLDKNGHIKITDFGFAKYVPD---------VTYXLCGTPDYIAPE 173
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 667 NLIGSGSFGSVLHNERTGSWKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNMEFLALV 725
++ G GSF + E ++ + E + LR V H N+++L + + F LV
Sbjct: 38 DVTGGGSFSA---EEVQELREATLKEVDILRKVSGHPNIIQLKDT-----YETNTFFFLV 89
Query: 726 YEFLSNGSLGDWIH-----GERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMT 780
++ + G L D++ E++ + + L+ + ++ +VH DLKP NILLD++M
Sbjct: 90 FDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN 149
Query: 781 AKVGDFGLA 789
K+ DFG +
Sbjct: 150 IKLTDFGFS 158
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 68
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 69 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKSQ 120
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGL R
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCR 173
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 86/212 (40%), Gaps = 45/212 (21%)
Query: 659 ATGNFSHENLIGSGSFGSVLHNERTGSWKSFIA---------ECET-------------- 695
A +E IG G FG ++H R KS +A E ET
Sbjct: 17 ADNEIEYEKQIGKGGFG-LVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 696 -LRNVRHRNLVKLITSCSSLDSKNMEFLA---LVYEFLSNGSLGDWIHGERKNELDITSA 751
+ N+ H N+VKL + MEF+ L + L W R LDI
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM-LDIALG 134
Query: 752 LDYLHNDCEVPVVHSDLKPGNIL---LDE--EMTAKVGDFGLARFLLERVDNQSSISSTH 806
++Y+ N P+VH DL+ NI LDE + AKV DFGL+ Q S+ S
Sbjct: 135 IEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS---------QQSVHSVS 184
Query: 807 VFMGSIGYVPPEYGLGERPSTAGDVPTSESFA 838
+G+ ++ PE +G + + + SFA
Sbjct: 185 GLLGNFQWMAPE-TIGAEEESYTEKADTYSFA 215
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 68
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 69 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 120
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ D+GLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLAR 173
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 35/179 (19%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDE---LRRATGNFSHENLIGSGSFGSVLHNE 681
+W + R + VG A VC SYD L+ A S F S++H +
Sbjct: 46 IWEVPERYQTLSPVGSGAYGSVCS---SYDVKSGLKIAVKKLSR-------PFQSIIHAK 95
Query: 682 RTGSWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWI 738
RT E L++++H N++ L+ T +SL+ N +L L L + +
Sbjct: 96 RT------YRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVT---HLMGADLNNIV 146
Query: 739 HGERKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
++ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 147 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 202
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 36/175 (20%)
Query: 669 IGSGSFGSVLHNERTGSWKSFI------------------AECETLRNVRHRNLVKLITS 710
IG GSFG + + T + ++ E L N++H N+V+ S
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 711 CSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDC-------EVPV 763
S L +V ++ G L I+ ++ LD+ C + +
Sbjct: 92 FEENGS-----LYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKI 146
Query: 764 VHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
+H D+K NI L ++ T ++GDFG+AR L S++ +G+ Y+ PE
Sbjct: 147 LHRDIKSQNIFLTKDGTVQLGDFGIARVL------NSTVELARACIGTPYYLSPE 195
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 15/126 (11%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE------ 745
E +R+ +H N+V++ S D L +V EFL G+L D + R NE
Sbjct: 121 EVVIMRDYQHENVVEMYNSYLVGDE-----LWVVMEFLEGGALTDIVTHTRMNEEQIAAV 175
Query: 746 -LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISS 804
L + AL LH V+H D+K +ILL + K+ DFG + + V + +
Sbjct: 176 CLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 232
Query: 805 THVFMG 810
T +M
Sbjct: 233 TPYWMA 238
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 42/204 (20%)
Query: 655 ELRRATGNFSHENLIGSGSFGSVLHNERTGSWKSFI--------------AECETLRN-- 698
+++ +F ++G GSFG V E + + F EC +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 699 ----VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL-------- 746
H L + C+ +N+ F V E+L+ G L I K +L
Sbjct: 72 LSLAWEHPFLTHMF--CTFQTKENLFF---VMEYLNGGDLMYHIQSCHKFDLSRATFYAA 126
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
+I L +LH+ +V+ DLK NILLD++ K+ DFG+ + +N + T+
Sbjct: 127 EIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK------ENMLGDAKTN 177
Query: 807 VFMGSIGYVPPEYGLGERPSTAGD 830
F G+ Y+ PE LG++ + + D
Sbjct: 178 EFCGTPDYIAPEILLGQKYNHSVD 201
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 37/157 (23%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE----------RKNELDITSALD 753
+VKL+ + ++N L LV+EFL L D++ + + L
Sbjct: 64 IVKLL---DVIHTENK--LYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 754 YLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 118 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 42/204 (20%)
Query: 655 ELRRATGNFSHENLIGSGSFGSVLHNERTGSWKSFI--------------AECETLRN-- 698
+++ +F ++G GSFG V E + + F EC +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 699 ----VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL-------- 746
H L + C+ +N+ F V E+L+ G L I K +L
Sbjct: 71 LSLAWEHPFLTHMF--CTFQTKENLFF---VMEYLNGGDLMYHIQSCHKFDLSRATFYAA 125
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
+I L +LH+ +V+ DLK NILLD++ K+ DFG+ + +N + T+
Sbjct: 126 EIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK------ENMLGDAKTN 176
Query: 807 VFMGSIGYVPPEYGLGERPSTAGD 830
F G+ Y+ PE LG++ + + D
Sbjct: 177 XFCGTPDYIAPEILLGQKYNHSVD 200
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 50/214 (23%)
Query: 664 SHENLIGSGSFGSVLHNE-RTGSWKS--------------------FIAECETLRNVRHR 702
+ + +IG+G FG V +T S K F+ E + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD----------ITSAL 752
N+++L S + ++ E++ NG+L ++ E+ E I + +
Sbjct: 107 NIIRLEGVISKYKP-----MMIITEYMENGALDKFLR-EKDGEFSVLQLVGMLRGIAAGM 160
Query: 753 DYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSI 812
YL N + VH DL NIL++ + KV DFGL+R L + + + S + I
Sbjct: 161 KYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI---PI 214
Query: 813 GYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
+ PE + ++A DV + F IV W
Sbjct: 215 RWTAPEAISYRKFTSASDVWS-------FGIVMW 241
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 43/182 (23%)
Query: 663 FSHENLIGSGSFGSVLH-------------------NERTGSWKSFIAECETLRNVRHRN 703
FS IG GSFG+V + W+ I E L+ +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS-------ALDYLH 756
++ C ++ +L + Y S L + +H + E++I + L YLH
Sbjct: 116 TIQY-RGCYL--REHTAWLVMEYCLGSASDLLE-VHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 757 NDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVP 816
+ ++H D+K GNILL E K+GDFG A S ++ + F+G+ ++
Sbjct: 172 SHN---MIHRDVKAGNILLSEPGLVKLGDFGSA----------SIMAPANXFVGTPYWMA 218
Query: 817 PE 818
PE
Sbjct: 219 PE 220
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 15/126 (11%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE------ 745
E +R+ +H N+V++ S D L +V EFL G+L D + R NE
Sbjct: 198 EVVIMRDYQHENVVEMYNSYLVGDE-----LWVVMEFLEGGALTDIVTHTRMNEEQIAAV 252
Query: 746 -LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISS 804
L + AL LH V+H D+K +ILL + K+ DFG + + V + +
Sbjct: 253 CLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 309
Query: 805 THVFMG 810
T +M
Sbjct: 310 TPYWMA 315
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 685 SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--R 742
SW++ E +L ++H N+++ I + S +++ L L+ F GSL D++
Sbjct: 62 SWQNEY-EVYSLPGMKHENILQFIGAEKRGTSVDVD-LWLITAFHEKGSLSDFLKANVVS 119
Query: 743 KNEL-----DITSALDYLHNDC-------EVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
NEL + L YLH D + + H D+K N+LL +TA + DFGLA
Sbjct: 120 WNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL 179
Query: 791 FLLERVDNQSSISSTHVFMGSIGYVPPE 818
+ + S TH +G+ Y+ PE
Sbjct: 180 ----KFEAGKSAGDTHGQVGTRRYMAPE 203
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--HGERKNEL--- 746
E E LR + H ++VK C K+++ LV E++ GSL D++ H +L
Sbjct: 60 EIEILRTLYHEHIVKYKGCCEDQGEKSVQ---LVMEYVPLGSLRDYLPRHCVGLAQLLLF 116
Query: 747 --DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794
I + YLH +H L N+LLD + K+GDFGLA+ + E
Sbjct: 117 AQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE 163
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--HGERKNEL--- 746
E E LR + H ++VK C K+++ LV E++ GSL D++ H +L
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQ---LVMEYVPLGSLRDYLPRHCVGLAQLLLF 117
Query: 747 --DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794
I + YLH +H L N+LLD + K+GDFGLA+ + E
Sbjct: 118 AQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE 164
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + R A S F S++H +RT
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-------PFQSIIHAKRT- 88
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 89 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 140
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 71/172 (41%), Gaps = 45/172 (26%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-------- 738
K F E E L N++H ++VK C D L +V+E++ +G L ++
Sbjct: 60 KDFHREAELLTNLQHEHIVKFYGVCVEGDP-----LIMVFEYMKHGDLNKFLRAHGPDAV 114
Query: 739 ---HGERKNEL----------DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGD 785
G EL I + + YL + VH DL N L+ E + K+GD
Sbjct: 115 LMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGD 171
Query: 786 FGLARFLLERVDNQSSISSTHVF------MGSIGYVPPEYGLGERPSTAGDV 831
FG++R + ST + M I ++PPE + + +T DV
Sbjct: 172 FGMSR----------DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDV 213
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 33/162 (20%)
Query: 659 ATGNFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVR 700
AT + IG G++G+V + N G S + E LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 701 ---HRNLVKLITSCSSLDSKNMEFLALVYEFLS-------NGSLGDWIHGERKNEL--DI 748
H N+V+L+ C++ + + LV+E + + + + E +L
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 749 TSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
LD+LH +C +VH DLKP NIL+ T K+ DFGLAR
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 33/162 (20%)
Query: 659 ATGNFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVR 700
AT + IG G++G+V + N G S + E LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 701 ---HRNLVKLITSCSSLDSKNMEFLALVYEFLS-------NGSLGDWIHGERKNEL--DI 748
H N+V+L+ C++ + + LV+E + + + + E +L
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 749 TSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
LD+LH +C +VH DLKP NIL+ T K+ DFGLAR
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 47/211 (22%)
Query: 666 ENLIGSGSFGSVL--HNERTGSWKSFIAECETLRN----VRHRNLVKLITSCSSLDSKNM 719
E +IG+G FG V H + G + F+A +TL++ + R+ + + D N+
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVA-IKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 720 EFLA----------LVYEFLSNGSLGDWIHGERKNELDIT------------SALDYLHN 757
L ++ EF+ NGSL ++ R+N+ T + + YL
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTVIQLVGMLRGIAAGMKYL-- 125
Query: 758 DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGS--IGYV 815
++ VH L NIL++ + KV DFGL+RFL D+ S + T G I +
Sbjct: 126 -ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFL---EDDTSDPTYTSALGGKIPIRWT 181
Query: 816 PPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
PE + ++A DV + IV W
Sbjct: 182 APEAIQYRKFTSASDV-------WSYGIVMW 205
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + R A S F S++H +RT
Sbjct: 36 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-------PFQSIIHAKRT- 87
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 88 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 139
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 140 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 192
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 33/162 (20%)
Query: 659 ATGNFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVR 700
AT + IG G++G+V + N G S + E LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 701 ---HRNLVKLITSCSSLDSKNMEFLALVYEFLS-------NGSLGDWIHGERKNEL--DI 748
H N+V+L+ C++ + + LV+E + + + + E +L
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 749 TSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
LD+LH +C +VH DLKP NIL+ T K+ DFGLAR
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + R A S F S++H +RT
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-------PFQSIIHAKRT- 88
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 89 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 140
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 43/182 (23%)
Query: 663 FSHENLIGSGSFGSVLH-------------------NERTGSWKSFIAECETLRNVRHRN 703
FS IG GSFG+V + W+ I E L+ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS-------ALDYLH 756
++ C ++ +L + Y S L + +H + E++I + L YLH
Sbjct: 77 TIQY-RGCYL--REHTAWLVMEYCLGSASDLLE-VHKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 757 NDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVP 816
+ ++H D+K GNILL E K+GDFG A S ++ + F+G+ ++
Sbjct: 133 SH---NMIHRDVKAGNILLSEPGLVKLGDFGSA----------SIMAPANXFVGTPYWMA 179
Query: 817 PE 818
PE
Sbjct: 180 PE 181
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + R A S F S++H +RT
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-------PFQSIIHAKRT- 64
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 65 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 116
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + R A S F S++H +RT
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-------PFQSIIHAKRT- 64
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 65 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 116
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + R A S F S++H +RT
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-------PFQSIIHAKRT- 68
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 69 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 120
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
+ F++E ++N+ H ++VKLI E ++ E G LG ++ KN L
Sbjct: 70 EKFMSEAVIMKNLDHPHIVKLIGIIEE------EPTWIIMELYPYGELGHYLE-RNKNSL 122
Query: 747 DITSALDYLHNDCE-------VPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799
+ + + Y C+ + VH D+ NIL+ K+GDFGL+R++ + +
Sbjct: 123 KVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYK 182
Query: 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
+S++ I ++ PE R +TA DV
Sbjct: 183 ASVTRL-----PIKWMSPESINFRRFTTASDV 209
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
+ F++E ++N+ H ++VKLI E ++ E G LG ++ KN L
Sbjct: 54 EKFMSEAVIMKNLDHPHIVKLIGIIEE------EPTWIIMELYPYGELGHYLE-RNKNSL 106
Query: 747 DITSALDYLHNDCE-------VPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799
+ + + Y C+ + VH D+ NIL+ K+GDFGL+R++ + +
Sbjct: 107 KVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYK 166
Query: 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
+S++ I ++ PE R +TA DV
Sbjct: 167 ASVTRL-----PIKWMSPESINFRRFTTASDV 193
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
+ F++E ++N+ H ++VKLI E ++ E G LG ++ KN L
Sbjct: 58 EKFMSEAVIMKNLDHPHIVKLIGIIEE------EPTWIIMELYPYGELGHYLE-RNKNSL 110
Query: 747 DITSALDYLHNDCE-------VPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799
+ + + Y C+ + VH D+ NIL+ K+GDFGL+R++ + +
Sbjct: 111 KVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYK 170
Query: 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
+S++ I ++ PE R +TA DV
Sbjct: 171 ASVTRL-----PIKWMSPESINFRRFTTASDV 197
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 45/204 (22%)
Query: 659 ATGNFSHENLIGSGSFGSVLH--NERTGSWKSF---------------IAECETLRNVRH 701
++ F +G+G++ +V N+ TG + + I E ++ ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 702 RNLVKLITSCSSLDSKNMEFLALVYEFLSNG--------SLGDWIHGERKN-----ELDI 748
N+V+L + + L LV+EF+ N ++G+ G N + +
Sbjct: 63 ENIVRLYDVIHTENK-----LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL 117
Query: 749 TSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVF 808
L + H E ++H DLKP N+L+++ K+GDFGLAR V+ SS T
Sbjct: 118 LQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVT--- 171
Query: 809 MGSIGYVPPEYGLGERP-STAGDV 831
+ Y P+ +G R ST+ D+
Sbjct: 172 ---LWYRAPDVLMGSRTYSTSIDI 192
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 34/150 (22%)
Query: 669 IGSGSFGSVLH--NERTGS-------WKSFIAEC---------ETLRNVRHRNLVKLI-- 708
+GSG++G+V + RTG+ ++ F +E L+++RH N++ L+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 709 -TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-------LDITSALDYLHNDCE 760
T +LD + LV F+ LG + E+ E + L Y+H
Sbjct: 93 FTPDETLD--DFTDFYLVMPFMGT-DLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHA--- 146
Query: 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
++H DLKPGN+ ++E+ K+ DFGLAR
Sbjct: 147 AGIIHRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + R A S F S++H +RT
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-------PFQSIIHAKRT- 68
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 69 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 120
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + R A S F S++H +RT
Sbjct: 27 IWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-------PFQSIIHAKRT- 78
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 79 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 130
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 131 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 183
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + R A S F S++H +RT
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-------PFQSIIHAKRT- 68
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 69 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 120
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 48/211 (22%)
Query: 632 KRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSV---LHNERTGSWKS 688
+R+ K++ +L K P+ +D L + +G GS+GSV +H E TG
Sbjct: 12 RRQLKKLDEDSLTK--QPEEVFDVLEK----------LGEGSYGSVYKAIHKE-TGQ--- 55
Query: 689 FIAECETLRNVRHRNLVKLITSCSSLDS-----------KNMEFLALVYEFLSNGSLGDW 737
+A + + ++K I+ DS KN + L +V E+ GS+ D
Sbjct: 56 IVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTD-LWIVMEYCGAGSVSDI 114
Query: 738 IHGERKN--ELDITS-------ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788
I K E +I + L+YLH + +H D+K GNILL+ E AK+ DFG+
Sbjct: 115 IRLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGV 171
Query: 789 ARFLLERVDNQSSISSTHVFMG-----SIGY 814
A L + + ++ + T +M IGY
Sbjct: 172 AGQLTDXMAKRNXVIGTPFWMAPEVIQEIGY 202
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 64 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 110 FQLLQGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 690 IAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLS-------NGSLGDWIHGER 742
+A L H N+V+L+ C++ + + LV+E + + + + E
Sbjct: 62 VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAET 121
Query: 743 KNEL--DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+L LD+LH +C +VH DLKP NIL+ T K+ DFGLAR
Sbjct: 122 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 168
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 27/168 (16%)
Query: 663 FSHENLIGSGSFGSVLHNERTGSWKSFIA-----------ECETLRNVRHRNLVKLITS- 710
+++ +IG+GSFG V + S + I E + +R V+H N+V L
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFF 101
Query: 711 CSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHNDC 759
S+ D K+ FL LV E++ H + + + +L Y+H+
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEM-TAKVGDFGLARFLLERVDNQSSISSTH 806
+ + H D+KP N+LLD K+ DFG A+ L+ N S I S +
Sbjct: 160 -IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY 206
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 58/207 (28%), Positives = 86/207 (41%), Gaps = 60/207 (28%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 64 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISST 805
L + H+ V+H DLKP N+L++ E K+ DFGLAR V + T
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-----TYT 161
Query: 806 HVFMGSIGYVPPEYGLGER-PSTAGDV 831
H + ++ Y PE LG + STA D+
Sbjct: 162 HEVV-TLWYRAPEILLGXKYYSTAVDI 187
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 78/167 (46%), Gaps = 24/167 (14%)
Query: 667 NLIGSGSFGSVLHNERTGSWKSFI-AECETLRNVR-HRNLVKLITSCSSLDSKNMEFLAL 724
NLI S + + ++ G +S + E E L + HRN+++LI D L
Sbjct: 34 NLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDR-----FYL 88
Query: 725 VYEFLSNGSLGDWIHGERK-NEL-------DITSALDYLHNDCEVPVVHSDLKPGNILLD 776
V+E + GS+ IH R NEL D+ SALD+LHN + H DLKP NIL +
Sbjct: 89 VFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCE 145
Query: 777 ---EEMTAKVGDFGLARFLLERVDNQSSISSTHVF--MGSIGYVPPE 818
+ K+ DF L + D S IS+ + GS Y+ PE
Sbjct: 146 HPNQVSPVKICDFDLGSGIKLNGDC-SPISTPELLTPCGSAEYMAPE 191
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 68
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 69 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 120
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ FGLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLAR 173
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 669 IGSGSFGSVLH--NERTGS----------------WKSFIAECETLRNVRHRNLVKLI-- 708
+GSG++GSV ++R+G K E L++++H N++ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 709 -TSCSSLDSKNMEFLALVYEFLS---NGSLGDWIHGERKNEL--DITSALDYLHNDCEVP 762
T SSL +N LV F+ +G E+ L + L Y+H+
Sbjct: 110 FTPASSL--RNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHS---AG 164
Query: 763 VVHSDLKPGNILLDEEMTAKVGDFGLAR 790
VVH DLKPGN+ ++E+ K+ DFGLAR
Sbjct: 165 VVHRDLKPGNLAVNEDCELKILDFGLAR 192
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 85/212 (40%), Gaps = 45/212 (21%)
Query: 659 ATGNFSHENLIGSGSFGSVLHNERTGSWKSFIA---------ECET-------------- 695
A +E IG G FG ++H R KS +A E ET
Sbjct: 17 ADNEIEYEKQIGKGGFG-LVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 696 -LRNVRHRNLVKLITSCSSLDSKNMEFLA---LVYEFLSNGSLGDWIHGERKNELDITSA 751
+ N+ H N+VKL + MEF+ L + L W R LDI
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM-LDIALG 134
Query: 752 LDYLHNDCEVPVVHSDLKPGNIL---LDE--EMTAKVGDFGLARFLLERVDNQSSISSTH 806
++Y+ N P+VH DL+ NI LDE + AKV DFG + Q S+ S
Sbjct: 135 IEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS---------QQSVHSVS 184
Query: 807 VFMGSIGYVPPEYGLGERPSTAGDVPTSESFA 838
+G+ ++ PE +G + + + SFA
Sbjct: 185 GLLGNFQWMAPE-TIGAEEESYTEKADTYSFA 215
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 13/113 (11%)
Query: 684 GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK 743
G + E L+ + H N+VKL+ LD N + L +V+E ++ G + + +
Sbjct: 78 GPIEQVYQEIAILKKLDHPNVVKLV---EVLDDPNEDHLYMVFELVNQGPVMEVPTLKPL 134
Query: 744 NE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789
+E D+ ++YLH ++H D+KP N+L+ E+ K+ DFG++
Sbjct: 135 SEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVS 184
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 82/185 (44%), Gaps = 40/185 (21%)
Query: 668 LIGSGSFGSVLH---NERTGSWK--------SFIAECETLRN--VRHRNLVKLITSCSSL 714
LIG G +G+V +ER + K +FI E R + H N+ + I +
Sbjct: 20 LIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERV 79
Query: 715 DSK-NMEFLALVYEFLSNGSL--------GDWIHGERKNELDITSALDYLHN-----DCE 760
+ ME+L LV E+ NGSL DW+ R +T L YLH D
Sbjct: 80 TADGRMEYL-LVMEYYPNGSLXKYLSLHTSDWVSSCRLAH-SVTRGLAYLHTELPRGDHY 137
Query: 761 VPVV-HSDLKPGNILLDEEMTAKVGDFGLA------RFLLERVDNQSSISSTHVFMGSIG 813
P + H DL N+L+ + T + DFGL+ R + ++ ++IS +G+I
Sbjct: 138 KPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE----VGTIR 193
Query: 814 YVPPE 818
Y+ PE
Sbjct: 194 YMAPE 198
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 35/156 (22%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLS---------NGSLGDWIHGERKNELDITSALDY 754
+VKL+ + ++N L LV+EFLS + G + + + L +
Sbjct: 65 IVKLL---DVIHTENK--LYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 755 LHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 120 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 19/135 (14%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSL-GDWIHGERKNELD--- 747
E R ++H N+V+L S S F LV++ ++ G L D + E +E D
Sbjct: 53 EARICRLLKHSNIVRLHDSISE-----EGFHYLVFDLVTGGELFEDIVAREYYSEADASH 107
Query: 748 -ITSALDYLHNDCEVPVVHSDLKPGNILLDEE---MTAKVGDFGLARFLLERVDNQSSIS 803
I L+ + + ++ VVH DLKP N+LL + K+ DFGLA ++ Q
Sbjct: 108 CIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA------IEVQGDQQ 161
Query: 804 STHVFMGSIGYVPPE 818
+ F G+ GY+ PE
Sbjct: 162 AWFGFAGTPGYLSPE 176
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 63 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 108
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 109 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 65 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 110
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 111 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 64 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 35/156 (22%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLS---------NGSLGDWIHGERKNELDITSALDY 754
+VKL+ + ++N L LV+EFLS + G + + + L +
Sbjct: 67 IVKLL---DVIHTENK--LYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 755 LHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 122 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 64 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 63 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 108
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 109 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 64 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 63 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 108
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 109 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 64 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 68
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 69 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 120
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ D GLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLAR 173
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 63 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 108
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 109 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + R A S F S++H +RT
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-------PFQSIIHAKRT- 74
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 75 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT---HLMGADLNNIVKCQ 126
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 66 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 111
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 112 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 67 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 112
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 66 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 111
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 112 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 85/212 (40%), Gaps = 45/212 (21%)
Query: 659 ATGNFSHENLIGSGSFGSVLHNERTGSWKSFIA---------ECET-------------- 695
A +E IG G FG ++H R KS +A E ET
Sbjct: 17 ADNEIEYEKQIGKGGFG-LVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 696 -LRNVRHRNLVKLITSCSSLDSKNMEFLA---LVYEFLSNGSLGDWIHGERKNELDITSA 751
+ N+ H N+VKL + MEF+ L + L W R LDI
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM-LDIALG 134
Query: 752 LDYLHNDCEVPVVHSDLKPGNIL---LDE--EMTAKVGDFGLARFLLERVDNQSSISSTH 806
++Y+ N P+VH DL+ NI LDE + AKV DF L+ Q S+ S
Sbjct: 135 IEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS---------QQSVHSVS 184
Query: 807 VFMGSIGYVPPEYGLGERPSTAGDVPTSESFA 838
+G+ ++ PE +G + + + SFA
Sbjct: 185 GLLGNFQWMAPE-TIGAEEESYTEKADTYSFA 215
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 65 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 110
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 111 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 65 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 110
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 111 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 64 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 64 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 68 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 113
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 114 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 63 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 108
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 109 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 64 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 26/138 (18%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSL-GDWIHGERKNELD--- 747
E R ++H N+V+L S + F LV++ ++ G L D + E +E D
Sbjct: 55 EARICRKLQHPNIVRLHDSI-----QEESFHYLVFDLVTGGELFEDIVAREFYSEADASH 109
Query: 748 ----ITSALDYLHNDCEVPVVHSDLKPGNILLDEE---MTAKVGDFGLARFLLERVDNQS 800
I ++ Y H++ +VH +LKP N+LL + K+ DFGLA +E D++
Sbjct: 110 CIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSE- 162
Query: 801 SISSTHVFMGSIGYVPPE 818
+ H F G+ GY+ PE
Sbjct: 163 ---AWHGFAGTPGYLSPE 177
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 26/138 (18%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSL-GDWIHGERKNELD--- 747
E R ++H N+V+L S + F LV++ ++ G L D + E +E D
Sbjct: 54 EARICRKLQHPNIVRLHDSI-----QEESFHYLVFDLVTGGELFEDIVAREFYSEADASH 108
Query: 748 ----ITSALDYLHNDCEVPVVHSDLKPGNILLDEE---MTAKVGDFGLARFLLERVDNQS 800
I ++ Y H++ +VH +LKP N+LL + K+ DFGLA +E D++
Sbjct: 109 CIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSE- 161
Query: 801 SISSTHVFMGSIGYVPPE 818
+ H F G+ GY+ PE
Sbjct: 162 ---AWHGFAGTPGYLSPE 176
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 26/138 (18%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSL-GDWIHGERKNELD--- 747
E R ++H N+V+L S + F LV++ ++ G L D + E +E D
Sbjct: 55 EARICRKLQHPNIVRLHDSI-----QEESFHYLVFDLVTGGELFEDIVAREFYSEADASH 109
Query: 748 ----ITSALDYLHNDCEVPVVHSDLKPGNILLDEE---MTAKVGDFGLARFLLERVDNQS 800
I ++ Y H++ +VH +LKP N+LL + K+ DFGLA +E D++
Sbjct: 110 CIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSE- 162
Query: 801 SISSTHVFMGSIGYVPPE 818
+ H F G+ GY+ PE
Sbjct: 163 ---AWHGFAGTPGYLSPE 177
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 58/207 (28%), Positives = 86/207 (41%), Gaps = 60/207 (28%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 71 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 116
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISST 805
L + H+ V+H DLKP N+L++ E K+ DFGLAR V + T
Sbjct: 117 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-----TYT 168
Query: 806 HVFMGSIGYVPPEYGLGER-PSTAGDV 831
H + ++ Y PE LG + STA D+
Sbjct: 169 HEVV-TLWYRAPEILLGXKYYSTAVDI 194
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 67 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKTFMDASALTGIPLPLIKSYL 112
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 67 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 112
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 71 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 116
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 117 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 68 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 113
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 114 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITS 750
+ H N+VK N+++L L E+ S G L D I + ++ + +
Sbjct: 61 LNHENVVKFY---GHRREGNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
+ YLH + + H D+KP N+LLDE K+ DFGLA R +N+ + + G
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MXG 168
Query: 811 SIGYVPPE 818
++ YV PE
Sbjct: 169 TLPYVAPE 176
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITS 750
+ H N+VK N+++L L E+ S G L D I + ++ + +
Sbjct: 62 LNHENVVKFY---GHRREGNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
+ YLH + + H D+KP N+LLDE K+ DFGLA R +N+ + + G
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MXG 169
Query: 811 SIGYVPPE 818
++ YV PE
Sbjct: 170 TLPYVAPE 177
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 669 IGSGSFGSVLH--NERTGS----------------WKSFIAECETLRNVRHRNLVKLI-- 708
+GSG++GSV ++R+G K E L++++H N++ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 709 -TSCSSLDSKNMEFLALVYEFLS---NGSLGDWIHGERKNEL--DITSALDYLHNDCEVP 762
T SSL +N LV F+ +G E+ L + L Y+H+
Sbjct: 92 FTPASSL--RNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHS---AG 146
Query: 763 VVHSDLKPGNILLDEEMTAKVGDFGLAR 790
VVH DLKPGN+ ++E+ K+ DFGLAR
Sbjct: 147 VVHRDLKPGNLAVNEDCELKILDFGLAR 174
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITS 750
+ H N+VK N+++L L E+ S G L D I + ++ + +
Sbjct: 61 LNHENVVKFY---GHRREGNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
+ YLH + + H D+KP N+LLDE K+ DFGLA R +N+ + + G
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MXG 168
Query: 811 SIGYVPPE 818
++ YV PE
Sbjct: 169 TLPYVAPE 176
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITS 750
+ H N+VK N+++L L E+ S G L D I + ++ + +
Sbjct: 61 LNHENVVKFY---GHRREGNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
+ YLH + + H D+KP N+LLDE K+ DFGLA R +N+ + + G
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MXG 168
Query: 811 SIGYVPPE 818
++ YV PE
Sbjct: 169 TLPYVAPE 176
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITS 750
+ H N+VK N+++L L E+ S G L D I + ++ + +
Sbjct: 61 LNHENVVKFY---GHRREGNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
+ YLH + + H D+KP N+LLDE K+ DFGLA R +N+ + + G
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MXG 168
Query: 811 SIGYVPPE 818
++ YV PE
Sbjct: 169 TLPYVAPE 176
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 66 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 111
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 112 FQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+EFL H + K +D ++
Sbjct: 65 IVKLL---DVIHTENK--LYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYL 110
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 111 FQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 24/136 (17%)
Query: 692 ECETLRNVR-HRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------R 742
E LR V H +++ LI S S F+ LV++ + G L D++ + R
Sbjct: 149 ETHILRQVAGHPHIITLIDSYES-----SSFMFLVFDLMRKGELFDYLTEKVALSEKETR 203
Query: 743 KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSI 802
+ A+ +LH + +VH DLKP NILLD+ M ++ DFG + L
Sbjct: 204 SIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHL-------EPG 253
Query: 803 SSTHVFMGSIGYVPPE 818
G+ GY+ PE
Sbjct: 254 EKLRELCGTPGYLAPE 269
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 39/175 (22%)
Query: 687 KSFIAECETLRNVRHRNLVKL---ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK 743
+ F++E + H N++ L +T C + ++ E++ NGSL ++ RK
Sbjct: 75 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDAFL---RK 123
Query: 744 NELDIT------------SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791
N+ T S + YL ++ VH DL NIL++ + KV DFG++R
Sbjct: 124 NDGRFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRV 180
Query: 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
L D+ + +T I + PE + ++A DV + + IV W
Sbjct: 181 L---EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWS-------YGIVMW 225
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 39/184 (21%)
Query: 665 HENLIGSGSFGSVLHNERTGSWKSFIA----------------ECETLRNVRHRNLVKLI 708
HE L G+G+FG V + +F A E +T+ +RH LV L
Sbjct: 56 HEEL-GTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLH 114
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDC-------EV 761
+ + + ++YEF+S G L + + E N++ A++Y+ C E
Sbjct: 115 DAFEDDNE-----MVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 762 PVVHSDLKPGNILLDEEMTA--KVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
VH DLKP NI+ + + K+ DFGL L D + S+ T G+ + PE
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL----DPKQSVKVT---TGTAEFAAPEV 221
Query: 820 GLGE 823
G+
Sbjct: 222 AEGK 225
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 35/166 (21%)
Query: 665 HENLIGSGSFGS---VLHNERTG--------------SWKSFIAECETLRNVRHRNLVKL 707
H ++G G FG V H E TG + ++F+ E + +R + H N++K
Sbjct: 14 HGEVLGKGCFGQAIKVTHRE-TGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKF 72
Query: 708 ITSCSSLDSKNMEFLALVYEFLSNGSL--------GDWIHGERKN-ELDITSALDYLHND 758
I K + F+ E++ G+L + +R + DI S + YLH+
Sbjct: 73 IGVLYK--DKRLNFIT---EYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS- 126
Query: 759 CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISS 804
+ ++H DL N L+ E V DFGLAR +++ + S
Sbjct: 127 --MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRS 170
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 39/156 (25%)
Query: 667 NLIGSGSFGSVLH-------------------NERTGSWK--SFIAECETLRNVRHRNLV 705
++GSG+FG+V NE TG F+ E + ++ H +LV
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 706 KLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELDITSALDYLH 756
+L+ C S + LV + + +G L +++H + N + I + YL
Sbjct: 104 RLLGVCLS------PTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 157
Query: 757 NDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
E +VH DL N+L+ K+ DFGLAR L
Sbjct: 158 ---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLL 190
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 39/184 (21%)
Query: 665 HENLIGSGSFGSVLHNERTGSWKSFIA----------------ECETLRNVRHRNLVKLI 708
HE L G+G+FG V + +F A E +T+ +RH LV L
Sbjct: 162 HEEL-GTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL- 219
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDC-------EV 761
+ + N + ++YEF+S G L + + E N++ A++Y+ C E
Sbjct: 220 --HDAFEDDNE--MVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 762 PVVHSDLKPGNILLDEEMTA--KVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
VH DLKP NI+ + + K+ DFGL L D + S+ T G+ + PE
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL----DPKQSVKVT---TGTAEFAAPEV 327
Query: 820 GLGE 823
G+
Sbjct: 328 AEGK 331
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 68
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 69 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 120
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ D GLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLAR 173
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 28/170 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-----------KSFI-AECETLRNVRHRNLVKL-I 708
+++ +IG+GSFG V + S K F E + +R + H N+V+L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHN 757
SS + K++ +L LV +++ H R + + +L Y+H+
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTH 806
+ H D+KP N+LLD + K+ DFG A+ L+ N S I S +
Sbjct: 141 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITS 750
+ H N+VK N+++L L E+ S G L D I + ++ + +
Sbjct: 61 LNHENVVKFY---GHRREGNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
+ YLH + + H D+KP N+LLDE K+ DFGLA R +N+ + + G
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCG 168
Query: 811 SIGYVPPE 818
++ YV PE
Sbjct: 169 TLPYVAPE 176
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITS 750
+ H N+VK N+++L L E+ S G L D I + ++ + +
Sbjct: 61 LNHENVVKFY---GHRREGNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
+ YLH + + H D+KP N+LLDE K+ DFGLA R +N+ + + G
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCG 168
Query: 811 SIGYVPPE 818
++ YV PE
Sbjct: 169 TLPYVAPE 176
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITS 750
+ H N+VK N+++L L E+ S G L D I + ++ + +
Sbjct: 60 LNHENVVKFY---GHRREGNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 114
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
+ YLH + + H D+KP N+LLDE K+ DFGLA R +N+ + + G
Sbjct: 115 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCG 167
Query: 811 SIGYVPPE 818
++ YV PE
Sbjct: 168 TLPYVAPE 175
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITS 750
+ H N+VK N+++L L E+ S G L D I + ++ + +
Sbjct: 61 LNHENVVKFY---GHRREGNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
+ YLH + + H D+KP N+LLDE K+ DFGLA R +N+ + + G
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCG 168
Query: 811 SIGYVPPE 818
++ YV PE
Sbjct: 169 TLPYVAPE 176
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITS 750
+ H N+VK N+++L L E+ S G L D I + ++ + +
Sbjct: 61 LNHENVVKFY---GHRREGNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
+ YLH + + H D+KP N+LLDE K+ DFGLA R +N+ + + G
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCG 168
Query: 811 SIGYVPPE 818
++ YV PE
Sbjct: 169 TLPYVAPE 176
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITS 750
+ H N+VK N+++L L E+ S G L D I + ++ + +
Sbjct: 62 LNHENVVKFY---GHRREGNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
+ YLH + + H D+KP N+LLDE K+ DFGLA R +N+ + + G
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCG 169
Query: 811 SIGYVPPE 818
++ YV PE
Sbjct: 170 TLPYVAPE 177
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITS 750
+ H N+VK N+++L L E+ S G L D I + ++ + +
Sbjct: 61 LNHENVVKFY---GHRREGNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
+ YLH + + H D+KP N+LLDE K+ DFGLA R +N+ + + G
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCG 168
Query: 811 SIGYVPPE 818
++ YV PE
Sbjct: 169 TLPYVAPE 176
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITS 750
+ H N+VK N+++L L E+ S G L D I + ++ + +
Sbjct: 61 LNHENVVKFY---GHRREGNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
+ YLH + + H D+KP N+LLDE K+ DFGLA R +N+ + + G
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCG 168
Query: 811 SIGYVPPE 818
++ YV PE
Sbjct: 169 TLPYVAPE 176
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITS 750
+ H N+VK N+++L L E+ S G L D I + ++ + +
Sbjct: 61 LNHENVVKFY---GHRREGNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
+ YLH + + H D+KP N+LLDE K+ DFGLA R +N+ + + G
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCG 168
Query: 811 SIGYVPPE 818
++ YV PE
Sbjct: 169 TLPYVAPE 176
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITS 750
+ H N+VK N+++L L E+ S G L D I + ++ + +
Sbjct: 62 LNHENVVKFY---GHRREGNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
+ YLH + + H D+KP N+LLDE K+ DFGLA R +N+ + + G
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCG 169
Query: 811 SIGYVPPE 818
++ YV PE
Sbjct: 170 TLPYVAPE 177
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITS 750
+ H N+VK N+++L L E+ S G L D I + ++ + +
Sbjct: 62 LNHENVVKFY---GHRREGNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
+ YLH + + H D+KP N+LLDE K+ DFGLA R +N+ + + G
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCG 169
Query: 811 SIGYVPPE 818
++ YV PE
Sbjct: 170 TLPYVAPE 177
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITS 750
+ H N+VK N+++L L E+ S G L D I + ++ + +
Sbjct: 62 LNHENVVKFY---GHRREGNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
+ YLH + + H D+KP N+LLDE K+ DFGLA R +N+ + + G
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCG 169
Query: 811 SIGYVPPE 818
++ YV PE
Sbjct: 170 TLPYVAPE 177
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITS 750
+ H N+VK N+++L L E+ S G L D I + ++ + +
Sbjct: 62 LNHENVVKFY---GHRREGNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
+ YLH + + H D+KP N+LLDE K+ DFGLA R +N+ + + G
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCG 169
Query: 811 SIGYVPPE 818
++ YV PE
Sbjct: 170 TLPYVAPE 177
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 699 VRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITS 750
+ H N+VK N+++L L E+ S G L D I + ++ + +
Sbjct: 62 LNHENVVKFY---GHRREGNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
+ YLH + + H D+KP N+LLDE K+ DFGLA R +N+ + + G
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCG 169
Query: 811 SIGYVPPE 818
++ YV PE
Sbjct: 170 TLPYVAPE 177
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + R A S F S++H +RT
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-------PFQSIIHAKRT- 64
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + +
Sbjct: 65 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCA 116
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DFGLAR
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 15/138 (10%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER-------KN 744
E + LR +RH+N+++L+ + + + M ++ + Y + D + +R
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKM-YMVMEYCVCGMQEMLDSVPEKRFPVCQAHGY 114
Query: 745 ELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISS 804
+ L+YLH+ +VH D+KPGN+LL T K+ G+A L + + +S
Sbjct: 115 FCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS 171
Query: 805 THVFMGSIGYVPPEYGLG 822
GS + PPE G
Sbjct: 172 ----QGSPAFQPPEIANG 185
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 57/219 (26%)
Query: 662 NFSHENLIGSGSFGSVL----------------------HNERTGSWKSFIAECETLRNV 699
N S + ++G+G FG V + E+ + F+ E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQF 103
Query: 700 RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDIT---------- 749
H N+++L + +K+ + +V E++ NGSL ++ RK++ T
Sbjct: 104 DHPNIIRL----EGVVTKSKPVM-IVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRG 155
Query: 750 --SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
S + YL ++ VH DL NIL++ + KV DFGLAR L D+ + +T
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVL---EDDPEAAYTTRG 209
Query: 808 FMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
I + PE + ++A DV + + IV W
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWS-------YGIVLW 241
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSL-GDWIHGERKNELDITS 750
E R ++H N+V+L S S F LV++ ++ G L D + E +E D +
Sbjct: 53 EARICRLLKHPNIVRLHDSISE-----EGFHYLVFDLVTGGELFEDIVAREYYSEADASH 107
Query: 751 ALDYLH---NDCEVP-VVHSDLKPGNILLDEE---MTAKVGDFGLARFLLERVDNQSSIS 803
+ + N C + +VH DLKP N+LL + K+ DFGLA ++ Q
Sbjct: 108 CIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA------IEVQGDQQ 161
Query: 804 STHVFMGSIGYVPPE 818
+ F G+ GY+ PE
Sbjct: 162 AWFGFAGTPGYLSPE 176
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 39/175 (22%)
Query: 687 KSFIAECETLRNVRHRNLVKL---ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK 743
+ F++E + H N++ L +T C + ++ E++ NGSL ++ RK
Sbjct: 54 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDAFL---RK 102
Query: 744 NELDIT------------SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791
N+ T S + YL ++ VH DL NIL++ + KV DFG++R
Sbjct: 103 NDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRV 159
Query: 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
L D+ + +T I + PE + ++A DV + + IV W
Sbjct: 160 L---EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWS-------YGIVMW 204
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 39/175 (22%)
Query: 687 KSFIAECETLRNVRHRNLVKL---ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK 743
+ F++E + H N++ L +T C + ++ E++ NGSL ++ RK
Sbjct: 60 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDAFL---RK 108
Query: 744 NELDIT------------SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791
N+ T S + YL ++ VH DL NIL++ + KV DFG++R
Sbjct: 109 NDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRV 165
Query: 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
L D+ + +T I + PE + ++A DV + + IV W
Sbjct: 166 L---EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWS-------YGIVMW 210
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + LR A S F S++H +RT
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRT- 68
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 69 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 120
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ D GLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLAR 173
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSL-GDWIHGERKNELDITS 750
E R ++H N+V+L S S F LV++ ++ G L D + E +E D +
Sbjct: 53 EARICRLLKHPNIVRLHDSISEEG-----FHYLVFDLVTGGELFEDIVAREYYSEADASH 107
Query: 751 ALDYL---HNDCEV-PVVHSDLKPGNILLDEE---MTAKVGDFGLARFLLERVDNQSSIS 803
+ + N C + +VH DLKP N+LL + K+ DFGLA ++ Q
Sbjct: 108 CIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA------IEVQGDQQ 161
Query: 804 STHVFMGSIGYVPPE 818
+ F G+ GY+ PE
Sbjct: 162 AWFGFAGTPGYLSPE 176
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 15/126 (11%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE------ 745
E +R+ +H N+V++ S D L +V EFL G+L D + R NE
Sbjct: 71 EVVIMRDYQHENVVEMYNSYLVGDE-----LWVVMEFLEGGALTDIVTHTRMNEEQIAAV 125
Query: 746 -LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISS 804
L + AL LH V+H D+K +ILL + K+ DFG + + V + +
Sbjct: 126 CLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 182
Query: 805 THVFMG 810
T +M
Sbjct: 183 TPYWMA 188
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 15/126 (11%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE------ 745
E +R+ +H N+V++ S D L +V EFL G+L D + R NE
Sbjct: 76 EVVIMRDYQHENVVEMYNSYLVGDE-----LWVVMEFLEGGALTDIVTHTRMNEEQIAAV 130
Query: 746 -LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISS 804
L + AL LH V+H D+K +ILL + K+ DFG + + V + +
Sbjct: 131 CLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 187
Query: 805 THVFMG 810
T +M
Sbjct: 188 TPYWMA 193
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 39/156 (25%)
Query: 667 NLIGSGSFGSVLH-------------------NERTGSWK--SFIAECETLRNVRHRNLV 705
++GSG+FG+V NE TG F+ E + ++ H +LV
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 706 KLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELDITSALDYLH 756
+L+ C S + LV + + +G L +++H + N + I + YL
Sbjct: 81 RLLGVCLS------PTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 134
Query: 757 NDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
E +VH DL N+L+ K+ DFGLAR L
Sbjct: 135 ---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLL 167
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 15/126 (11%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE------ 745
E +R+ +H N+V++ S D L +V EFL G+L D + R NE
Sbjct: 78 EVVIMRDYQHENVVEMYNSYLVGDE-----LWVVMEFLEGGALTDIVTHTRMNEEQIAAV 132
Query: 746 -LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISS 804
L + AL LH V+H D+K +ILL + K+ DFG + + V + +
Sbjct: 133 CLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 189
Query: 805 THVFMG 810
T +M
Sbjct: 190 TPYWMA 195
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 15/126 (11%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE------ 745
E +R+ +H N+V++ S D L +V EFL G+L D + R NE
Sbjct: 67 EVVIMRDYQHENVVEMYNSYLVGDE-----LWVVMEFLEGGALTDIVTHTRMNEEQIAAV 121
Query: 746 -LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISS 804
L + AL LH V+H D+K +ILL + K+ DFG + + V + +
Sbjct: 122 CLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 178
Query: 805 THVFMG 810
T +M
Sbjct: 179 TPYWMA 184
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 79/187 (42%), Gaps = 37/187 (19%)
Query: 669 IGSGSFGSVLHNERTGSWKSFIA---------------ECETLRNVRHRNLVKLITSCSS 713
+G G FG V T S K+++A E L RHRN++ L S S
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 714 LDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCEV-------PVVHS 766
ME L +++EF+S + + I+ EL+ + Y+H CE + H
Sbjct: 73 -----MEELVMIFEFISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSHNIGHF 126
Query: 767 DLKPGNILLDEEM--TAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER 824
D++P NI+ T K+ +FG AR L+ DN + + Y PE +
Sbjct: 127 DIRPENIIYQTRRSSTIKIIEFGQAR-QLKPGDN------FRLLFTAPEYYAPEVHQHDV 179
Query: 825 PSTAGDV 831
STA D+
Sbjct: 180 VSTATDM 186
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 98 RSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISK-LTELKMLDLMANKIT 156
+ + LQ+NKLS + L +LR+L ++ N LQ LP I K L L+ L + NK+
Sbjct: 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQ 98
Query: 157 GRVTD--DQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAG 214
DQL NL L++ +N L S+PP + L L L L N L
Sbjct: 99 ALPIGVFDQLVNLAELRL---DRNQL-KSLPPRV-------FDSLTKLTYLSLGYNELQ- 146
Query: 215 TVPSTIYN-MTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLT 273
++P +++ +TSL LRL +NQL +P D L L N+ G+ +L
Sbjct: 147 SLPKGVFDKLTSLKELRLYNNQL-KRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLE 205
Query: 274 NIQIIRMTHNLLEGT 288
++++++ N + T
Sbjct: 206 KLKMLQLQENPWDCT 220
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 16/170 (9%)
Query: 413 IPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRP 472
IP IP A+ KKL DL N+L+ +F L + L++N++ +P GI +
Sbjct: 31 IPSNIP---ADTKKL---DLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFK- 82
Query: 473 LPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLE 532
L+N+ T+ ++DN L +L EL + NQ P + L L
Sbjct: 83 ------ELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLT 136
Query: 533 VLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVH 582
L L N+L L +L+ L L +NN VP EG F ++ +
Sbjct: 137 YLSLGYNELQSLPKGVFDKLTSLKELRL-YNNQLKRVP-EGAFDKLTELK 184
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 61/143 (42%), Gaps = 13/143 (9%)
Query: 97 LRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNI-SKLTELKMLDLMANKI 155
L ++L N+L PR +L +L L++ +N LQ LP + KLT LK L L N++
Sbjct: 111 LAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFDKLTSLKELRLYNNQL 169
Query: 156 TGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGT 215
RV + L L+ L N L +P LE LK+L L N T
Sbjct: 170 K-RVPEGAFDKLTELKTLKLDNNQL-KRVPEGA-------FDSLEKLKMLQLQENPWDCT 220
Query: 216 VPSTIYNMTSLVHLRLASNQLGG 238
IY L + A LGG
Sbjct: 221 CNGIIYMAKWLK--KKADEGLGG 241
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 87/177 (49%), Gaps = 24/177 (13%)
Query: 429 QIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDL 488
+D S N LT + + G+ L ++ L N++ L + E ++++++ +D+
Sbjct: 328 HLDFSNNLLTDTVFENCGHLTELETLILQMNQLKE------LSKIAEMTTQMKSLQQLDI 381
Query: 489 SDNSLSGNLPNSLKNC---KSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSI 545
S NS+S + +C KSL L M+ N + I + ++VLDL SNK+ SI
Sbjct: 382 SQNSVSYDEKKG--DCSWTKSLLSLNMSSNILTDTIFRCLPP--RIKVLDLHSNKI-KSI 436
Query: 546 PSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSN---VHLKGNPKLCLQLGCENPR 599
P + L+AL+ LN+ N L+ V +GIF +++ + L NP C PR
Sbjct: 437 PKQVVKLEALQELNVASNQLKSV--PDGIFDRLTSLQKIWLHTNP-----WDCSCPR 486
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 75 GLNLSSFGLEGTISPHI---GNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNL 131
+N+ +F + GT H+ +S + NN L+ + G+L L L + N L
Sbjct: 301 NMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQL 360
Query: 132 Q--GELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSI----P 185
+ ++ +++ L+ LD+ N ++ +SL LN N+L +I P
Sbjct: 361 KELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP 420
Query: 186 PSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVR 245
P I KVLDL N++ ++P + + +L L +ASNQL +P +
Sbjct: 421 PRI--------------KVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIF 464
Query: 246 DTLPNL 251
D L +L
Sbjct: 465 DRLTSL 470
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 415 GGIPNSLANLKKLNQIDLSGNELTGEIPISFGNF-QSLLSIDLSNNRINGNIPKGILRPL 473
I +K L Q+D+S N ++ + ++ +SLLS+++S+N + I R L
Sbjct: 364 SKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTI----FRCL 419
Query: 474 PEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEV 533
P I L DL N + +P + ++L+EL +A NQ I L L+
Sbjct: 420 PPRIKVL------DLHSNKIKS-IPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQK 472
Query: 534 LDLSSNKLSGSIP 546
+ L +N S P
Sbjct: 473 IWLHTNPWDCSCP 485
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 28/175 (16%)
Query: 420 SLANLKKLNQIDLSGNELTGE----------IPISFGNFQSLL-----SIDLSNNRINGN 464
S++N+K Q+D + +G + FG QS + ++++ N ++G
Sbjct: 253 SISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGT 312
Query: 465 IPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFS--GPIP 522
+L P S++ + +D S+N L+ + + + LE L++ NQ I
Sbjct: 313 RMVHMLCP-----SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIA 367
Query: 523 NIVAELKGLEVLDLSSNKLS-GSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFR 576
+ ++K L+ LD+S N +S D ++L SLN++ N L ++ IFR
Sbjct: 368 EMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNIL-----TDTIFR 417
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 28/170 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-----------KSFI-AECETLRNVRHRNLVKL-I 708
+++ +IG+GSFG V + S K+F E + +R + H N+V+L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHN 757
SS + K+ +L LV +++ H R + + +L Y+H+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTH 806
+ H D+KP N+LLD + K+ DFG A+ L+ N S I S +
Sbjct: 141 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 28/170 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-----------KSFI-AECETLRNVRHRNLVKL-I 708
+++ +IG+GSFG V + S K+F E + +R + H N+V+L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHN 757
SS + K+ +L LV +++ H R + + +L Y+H+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTH 806
+ H D+KP N+LLD + K+ DFG A+ L+ N S I S +
Sbjct: 141 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 85/215 (39%), Gaps = 42/215 (19%)
Query: 649 PKISYDE-----LRRATGNFSHENLIGSGSFGSVLHNE--RTGSWKSFIA------ECET 695
P S DE LR G F L+G+G++G V +TG + E E
Sbjct: 7 PARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEE 66
Query: 696 LRN--------VRHRNLVKLITSCSSLDSKNME-FLALVYEFLSNGSLGDWIHGERKNEL 746
++ HRN+ + + M+ L LV EF GS+ D I + N L
Sbjct: 67 IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTL 126
Query: 747 ----------DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796
+I L +LH V+H D+K N+LL E K+ DFG++ L
Sbjct: 127 KEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL---- 179
Query: 797 DNQSSISSTHVFMGSIGYVPPEY-GLGERPSTAGD 830
++ + F+G+ ++ PE E P D
Sbjct: 180 --DRTVGRRNTFIGTPYWMAPEVIACDENPDATYD 212
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 26/138 (18%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSL-GDWIHGERKNELD--- 747
E R ++H N+V+L S + F LV++ ++ G L D + E +E D
Sbjct: 78 EARICRKLQHPNIVRLHDSI-----QEESFHYLVFDLVTGGELFEDIVAREFYSEADASH 132
Query: 748 ----ITSALDYLHNDCEVPVVHSDLKPGNILLDEE---MTAKVGDFGLARFLLERVDNQS 800
I ++ Y H++ +VH +LKP N+LL + K+ DFGLA +E D++
Sbjct: 133 CIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSE- 185
Query: 801 SISSTHVFMGSIGYVPPE 818
+ H F G+ GY+ PE
Sbjct: 186 ---AWHGFAGTPGYLSPE 200
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 110/310 (35%), Gaps = 74/310 (23%)
Query: 654 DELRRATGNFSHENLIGSGSFGSVLHNERTGSWKSFIA-------------------ECE 694
D L RA + IG G++G V + F+A E
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 695 TLRNVR---HRNLVKLITSCSSLDSKNMEFLALVYEFLSNG---------SLGDWIHGER 742
LR++ H N+V+L C+ + L LV+E + G +
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 743 KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSI 802
+ LD+LH+ VVH DLKP NIL+ K+ DFGLAR Q ++
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMAL 176
Query: 803 SSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWV--------------- 847
+S V ++ Y PE L +T D+ + E K +
Sbjct: 177 TSVVV---TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD 233
Query: 848 ------ESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVG----LSCTTESP 897
E + P +V RQ S +Q I+ +T I +G L C T +P
Sbjct: 234 VIGLPGEEDWPRDVALP-----RQAFHSKSAQPIEK---FVTDIDELGKDLLLKCLTFNP 285
Query: 898 GGRIGIREAL 907
RI AL
Sbjct: 286 AKRISAYSAL 295
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 25/126 (19%)
Query: 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHN 757
+ SC +S+ L V E+++ G L H +R+ +L +I+ AL+YLH
Sbjct: 118 LHSCFQTESR----LFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYLH- 170
Query: 758 DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPP 817
E +++ DLK N+LLD E K+ D+G+ + L D +T F G+ Y+ P
Sbjct: 171 --ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD------TTSTFCGTPNYIAP 222
Query: 818 EYGLGE 823
E GE
Sbjct: 223 EILRGE 228
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 28/170 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-----------KSFI-AECETLRNVRHRNLVKL-I 708
+++ +IG+GSFG V + S K+F E + +R + H N+V+L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHN 757
SS + K+ +L LV +++ H R + + +L Y+H+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTH 806
+ H D+KP N+LLD + K+ DFG A+ L+ N S I S +
Sbjct: 141 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 79/191 (41%), Gaps = 44/191 (23%)
Query: 657 RRATGNFSHENLIGSGSFGSVL--HNERTGSW-------KSFI-----AECETLRNVR-- 700
R NF ++G GSFG V+ + TG K I EC T+ R
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVEC-TMTEKRIL 77
Query: 701 -----HRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE--------LD 747
H L +L + D L V EF++ G L I R+ + +
Sbjct: 78 SLARNHPFLTQLFCCFQTPDR-----LFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAE 132
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I SAL +LH+ +++ DLK N+LLD E K+ DFG+ + + + +T
Sbjct: 133 IISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK------EGICNGVTTAT 183
Query: 808 FMGSIGYVPPE 818
F G+ Y+ PE
Sbjct: 184 FCGTPDYIAPE 194
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 46/195 (23%)
Query: 658 RATGNFSHENLIGSGSFGSVLH--NERTGSW---------------KSFIAECETLRNVR 700
+ G + + +G+G FG VL ++ TG + + E + ++ +
Sbjct: 12 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 71
Query: 701 HRNLV---KLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIH------GERKNEL----- 746
H N+V ++ L ++ LA+ E+ G L +++ G ++ +
Sbjct: 72 HPNVVSAREVPDGLQKLAPNDLPLLAM--EYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 129
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLD---EEMTAKVGDFGLARFLLERVDNQSSIS 803
DI+SAL YLH E ++H DLKP NI+L + + K+ D G A+ L +Q +
Sbjct: 130 DISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL-----DQGELC 181
Query: 804 STHVFMGSIGYVPPE 818
+ F+G++ Y+ PE
Sbjct: 182 TE--FVGTLQYLAPE 194
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 63/147 (42%), Gaps = 33/147 (22%)
Query: 669 IGSGSFGSV-----------------LHNERTGSWKSFIAECETLRNVRHRNLVKLITSC 711
IG G++G V L E G + I E L+ ++H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 712 SSLDSKNMEFLALVYEFLSNG--SLGDWIHG------ERKNELDITSALDYLHNDCEVPV 763
+ + L LV+E L L D G + L + + + Y H+ V
Sbjct: 70 HT-----KKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RV 121
Query: 764 VHSDLKPGNILLDEEMTAKVGDFGLAR 790
+H DLKP N+L++ E K+ DFGLAR
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 9/76 (11%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I S L++LH + +++ DLKP N+LLD++ ++ D GLA V+ ++ + T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA------VELKAGQTKTKG 348
Query: 808 FMGSIGYVPPEYGLGE 823
+ G+ G++ PE LGE
Sbjct: 349 YAGTPGFMAPELLLGE 364
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 28/175 (16%)
Query: 669 IGSGSFGSVLHNERTGSW-----------KSFIAECETLRNV--RHRNLVKLITSCSSLD 715
IG G FG V + G +S+ E E + V RH N++ I + + D
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAA-DNKD 108
Query: 716 SKNMEFLALVYEFLSNGSLGDW-------IHGERKNELDITSALDYLHNDC-----EVPV 763
+ L LV ++ +GSL D+ + G K L S L +LH + + +
Sbjct: 109 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 168
Query: 764 VHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
H DLK NIL+ + T + D GLA + + I+ H +G+ Y+ PE
Sbjct: 169 AHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHR-VGTKRYMAPE 221
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 28/175 (16%)
Query: 669 IGSGSFGSVLHNERTGSW-----------KSFIAECETLRNV--RHRNLVKLITSCSSLD 715
IG G FG V + G +S+ E E + V RH N++ I + + D
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAA-DNKD 95
Query: 716 SKNMEFLALVYEFLSNGSLGDW-------IHGERKNELDITSALDYLHNDC-----EVPV 763
+ L LV ++ +GSL D+ + G K L S L +LH + + +
Sbjct: 96 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 155
Query: 764 VHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
H DLK NIL+ + T + D GLA + + I+ H +G+ Y+ PE
Sbjct: 156 AHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHR-VGTKRYMAPE 208
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 63/147 (42%), Gaps = 33/147 (22%)
Query: 669 IGSGSFGSV-----------------LHNERTGSWKSFIAECETLRNVRHRNLVKLITSC 711
IG G++G V L E G + I E L+ ++H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 712 SSLDSKNMEFLALVYEFLSNG--SLGDWIHG------ERKNELDITSALDYLHNDCEVPV 763
+ + L LV+E L L D G + L + + + Y H+ V
Sbjct: 70 HT-----KKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RV 121
Query: 764 VHSDLKPGNILLDEEMTAKVGDFGLAR 790
+H DLKP N+L++ E K+ DFGLAR
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 9/76 (11%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I S L++LH + +++ DLKP N+LLD++ ++ D GLA V+ ++ + T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA------VELKAGQTKTKG 348
Query: 808 FMGSIGYVPPEYGLGE 823
+ G+ G++ PE LGE
Sbjct: 349 YAGTPGFMAPELLLGE 364
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 25/138 (18%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSL-GDWIHGERKNELD--- 747
E R ++H N+V+L S S F LV++ ++ G L D + E +E D
Sbjct: 80 EARICRLLKHPNIVRLHDSISEEG-----FHYLVFDLVTGGELFEDIVAREYYSEADASH 134
Query: 748 ----ITSALDYLHNDCEVPVVHSDLKPGNILLDEE---MTAKVGDFGLARFLLERVDNQS 800
I +++++H +VH DLKP N+LL + K+ DFGLA ++ Q
Sbjct: 135 CIHQILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLA------IEVQG 185
Query: 801 SISSTHVFMGSIGYVPPE 818
+ F G+ GY+ PE
Sbjct: 186 EQQAWFGFAGTPGYLSPE 203
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 9/76 (11%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I S L++LH + +++ DLKP N+LLD++ ++ D GLA V+ ++ + T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA------VELKAGQTKTKG 348
Query: 808 FMGSIGYVPPEYGLGE 823
+ G+ G++ PE LGE
Sbjct: 349 YAGTPGFMAPELLLGE 364
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 9/76 (11%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I S L++LH + +++ DLKP N+LLD++ ++ D GLA V+ ++ + T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA------VELKAGQTKTKG 348
Query: 808 FMGSIGYVPPEYGLGE 823
+ G+ G++ PE LGE
Sbjct: 349 YAGTPGFMAPELLLGE 364
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 46/195 (23%)
Query: 658 RATGNFSHENLIGSGSFGSVLH--NERTGSW---------------KSFIAECETLRNVR 700
+ G + + +G+G FG VL ++ TG + + E + ++ +
Sbjct: 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 70
Query: 701 HRNLV---KLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIH------GERKNEL----- 746
H N+V ++ L ++ LA+ E+ G L +++ G ++ +
Sbjct: 71 HPNVVSAREVPDGLQKLAPNDLPLLAM--EYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 128
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLD---EEMTAKVGDFGLARFLLERVDNQSSIS 803
DI+SAL YLH E ++H DLKP NI+L + + K+ D G A+ L +Q +
Sbjct: 129 DISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL-----DQGELC 180
Query: 804 STHVFMGSIGYVPPE 818
+ F+G++ Y+ PE
Sbjct: 181 TE--FVGTLQYLAPE 193
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 63/147 (42%), Gaps = 33/147 (22%)
Query: 669 IGSGSFGSV-----------------LHNERTGSWKSFIAECETLRNVRHRNLVKLITSC 711
IG G++G V L E G + I E L+ ++H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 712 SSLDSKNMEFLALVYEFLSNG--SLGDWIHG------ERKNELDITSALDYLHNDCEVPV 763
+ + L LV+E L L D G + L + + + Y H+ V
Sbjct: 70 HT-----KKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RV 121
Query: 764 VHSDLKPGNILLDEEMTAKVGDFGLAR 790
+H DLKP N+L++ E K+ DFGLAR
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 25/126 (19%)
Query: 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHN 757
+ SC +S+ L V E+++ G L H +R+ +L +I+ AL+YLH
Sbjct: 86 LHSCFQTESR----LFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYLH- 138
Query: 758 DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPP 817
E +++ DLK N+LLD E K+ D+G+ + L D +T F G+ Y+ P
Sbjct: 139 --ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD------TTSXFCGTPNYIAP 190
Query: 818 EYGLGE 823
E GE
Sbjct: 191 EILRGE 196
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 67/151 (44%), Gaps = 29/151 (19%)
Query: 664 SHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVK-------------LITS 710
S ++G G FG V E T + A+ R ++ + VK LI
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 711 CSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN--ELD-------ITSALDYLHNDCEV 761
+ +SKN + LV E++ G L D I E N ELD I + ++H ++
Sbjct: 152 YDAFESKND--IVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QM 206
Query: 762 PVVHSDLKPGNILL--DEEMTAKVGDFGLAR 790
++H DLKP NIL + K+ DFGLAR
Sbjct: 207 YILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 480 LENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFS-GPIPNIVAELKGLEVLDLSS 538
L N++ +D+S SLE L MA N F +P+I EL+ L LDLS
Sbjct: 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479
Query: 539 NKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVH---LKGNPKLC 590
+L P+ +L +L+ LN+ N L+ V +GIF ++++ L NP C
Sbjct: 480 CQLEQLSPTAFNSLSSLQVLNMASNQLKSV--PDGIFDRLTSLQKIWLHTNPWDC 532
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 31/165 (18%)
Query: 412 EIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILR 471
+IP +P S NL DLS N L SF +F L +DLS I I G +
Sbjct: 21 KIPDNLPFSTKNL------DLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQ 73
Query: 472 PLPE--------------------EISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELL 511
L +S L+ +V ++ + SL N P + + K+L+EL
Sbjct: 74 SLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE-NFP--IGHLKTLKELN 130
Query: 512 MAYNQF-SGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQAL 555
+A+N S +P + L LE LDLSSNK+ +DL+ L +
Sbjct: 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 138 NISKLTELKMLDLMANKITGRVTDDQLR--------NLRSLQVLNFGKNLLWGSIPPSIA 189
N+ +++E + + N I ++ R L SL+VL N
Sbjct: 407 NLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ-------E 459
Query: 190 NLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLP 249
N +P + L NL LDL+ +L P+ +++SL L +ASNQL +P + D L
Sbjct: 460 NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS-VPDGIFDRLT 518
Query: 250 NL 251
+L
Sbjct: 519 SL 520
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 49/124 (39%), Gaps = 7/124 (5%)
Query: 423 NLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLEN 482
+L+ L +D+S F SL + ++ N N LP+ + L N
Sbjct: 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF-------LPDIFTELRN 471
Query: 483 VVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLS 542
+ +DLS L P + + SL+ L MA NQ I L L+ + L +N
Sbjct: 472 LTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 531
Query: 543 GSIP 546
S P
Sbjct: 532 CSCP 535
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 24/165 (14%)
Query: 98 RSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITG 157
+ ++L K+ NLP F + L++SFN L+ + EL++LDL +I
Sbjct: 13 QCMELNFYKIPDNLP------FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ- 65
Query: 158 RVTDDQLRNLRSLQVL----NFGKNLLWGSIP--PSIANLIP--SDLSRLEN-------- 201
+ D ++L L L N ++L G+ S+ L+ ++L+ LEN
Sbjct: 66 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 125
Query: 202 LKVLDLTINRLAG-TVPSTIYNMTSLVHLRLASNQLGGEIPYDVR 245
LK L++ N + +P N+T+L HL L+SN++ D+R
Sbjct: 126 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR 170
Score = 33.1 bits (74), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 110 NLPREIGNLFRLRVLNISFNNLQG-ELPVNISKLTELKMLDLMANKITGRVTDDQLRNLR 168
N P IG+L L+ LN++ N +Q +LP S LT L+ LDL +NKI D LR L
Sbjct: 117 NFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD-LRVLH 173
Query: 169 SL 170
+
Sbjct: 174 QM 175
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 142 LTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLEN 201
L+ L++L + N D LR+L L+ + + L P+ + L +
Sbjct: 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ--------CQLEQLSPTAFNSLSS 495
Query: 202 LKVLDLTINRLAGTVPSTIYN-MTSLVHLRLASNQLGGEIP 241
L+VL++ N+L +VP I++ +TSL + L +N P
Sbjct: 496 LQVLNMASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 535
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 48/192 (25%)
Query: 669 IGSGSFGSVL--HNERTG--------------SWKSFIAECETLRNVRHRNLVKLITSCS 712
+G G+FG V N+ T + ++ E + L + H N+VKL+ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 713 SLDSKNMEFLALVYEFLSNGSLGD-WIHGER-----------KNELDITSALDYLHNDCE 760
++ L ++ EF + G++ + ER K LD AL+YLH++
Sbjct: 105 YENN-----LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHDN-- 154
Query: 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYG 820
++H DLK GNIL + K+ DFG++ N +I F+G+ ++ PE
Sbjct: 155 -KIIHRDLKAGNILFTLDGDIKLADFGVS------AKNTRTIQRRDSFIGTPYWMAPEVV 207
Query: 821 LGERPSTAGDVP 832
+ E T+ D P
Sbjct: 208 MCE---TSKDRP 216
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 57/219 (26%)
Query: 662 NFSHENLIGSGSFGSVL----------------------HNERTGSWKSFIAECETLRNV 699
N S + ++G+G FG V + E+ + F+ E +
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQF 74
Query: 700 RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDIT---------- 749
H N+++L + +K+ + +V E++ NGSL ++ RK++ T
Sbjct: 75 DHPNIIRL----EGVVTKSKPVM-IVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRG 126
Query: 750 --SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
S + YL + + VH DL NIL++ + KV DFGL+R L D+ + +T
Sbjct: 127 IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRG 180
Query: 808 FMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
I + PE + ++A DV + + IV W
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWS-------YGIVLW 212
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 57/219 (26%)
Query: 662 NFSHENLIGSGSFGSVL----------------------HNERTGSWKSFIAECETLRNV 699
N S + ++G+G FG V + E+ + F+ E +
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQF 91
Query: 700 RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDIT---------- 749
H N+++L + +K+ + +V E++ NGSL ++ RK++ T
Sbjct: 92 DHPNIIRL----EGVVTKSKPVM-IVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRG 143
Query: 750 --SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
S + YL + + VH DL NIL++ + KV DFGL+R L D+ + +T
Sbjct: 144 IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRG 197
Query: 808 FMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
I + PE + ++A DV + + IV W
Sbjct: 198 GKIPIRWTSPEAIAYRKFTSASDVWS-------YGIVLW 229
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 28/168 (16%)
Query: 688 SFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE----RK 743
F+ E L+ H N+V+LI C+ + + +V E + G ++ E R
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCT-----QKQPIYIVMELVQGGDFLTFLRTEGARLRV 212
Query: 744 NEL-----DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798
L D + ++YL + C +H DL N L+ E+ K+ DFG++R E D
Sbjct: 213 KTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR---EEADG 266
Query: 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
+ S G + VP ++ E + +SES F I+ W
Sbjct: 267 VXAAS------GGLRQVPVKWTAPEALNYGRY--SSESDVWSFGILLW 306
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 35/185 (18%)
Query: 196 LSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFI 255
+ L N++ L L N+L S + +T+L +L L NQL +P V D L NL + +
Sbjct: 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELV 115
Query: 256 YCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDD 315
N+ G LTN+ + + HN L+ +LP G+ F+K+
Sbjct: 116 LVENQLQSLPDGVFDKLTNLTYLYLYHNQLQ-SLPKGV------------FDKL------ 156
Query: 316 EGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGR 375
T+L L LD NQ + +PE + + +L +L L N + R
Sbjct: 157 ------------TNLTRLDLDNNQLQS-LPEGVFDKLTQLKQLSLNDNQLKSVPDGVFDR 203
Query: 376 LRSLT 380
L SLT
Sbjct: 204 LTSLT 208
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 69/191 (36%), Gaps = 56/191 (29%)
Query: 292 GLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEG--------- 342
G+ LP +R +G NK L I++L T+L YL L GNQ +
Sbjct: 58 GIQYLPNVRYLALGGNK---------LHDISALKELTNLTYLILTGNQLQSLPNGVFDKL 108
Query: 343 --------------KIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNS 388
+P+ + + L+ LYL N + +L +LT LDL N
Sbjct: 109 TNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQ 168
Query: 389 ISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNF 448
+ +P G+ + L LK Q+ L+ N+L F
Sbjct: 169 LQS---------------------LPEGVFDKLTQLK---QLSLNDNQLKSVPDGVFDRL 204
Query: 449 QSLLSIDLSNN 459
SL I L NN
Sbjct: 205 TSLTHIWLLNN 215
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 12/129 (9%)
Query: 465 IPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNI 524
+P G+ ++++ L+ +V ++ SL + + L N L L + +NQ +
Sbjct: 100 LPNGVF----DKLTNLKELVLVENQLQSLPDGVFDKLTN---LTYLYLYHNQLQSLPKGV 152
Query: 525 VAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIF---RNMSNV 581
+L L LDL +N+L L L+ L+L N L+ V +G+F +++++
Sbjct: 153 FDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSV--PDGVFDRLTSLTHI 210
Query: 582 HLKGNPKLC 590
L NP C
Sbjct: 211 WLLNNPWDC 219
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 28/170 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-----------KSFI-AECETLRNVRHRNLVKL-I 708
+++ +IG+GSFG V + S K F E + +R + H N+V+L
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 84
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHN 757
SS + K+ +L LV +++ H R + + +L Y+H+
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 144
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTH 806
+ H D+KP N+LLD + K+ DFG A+ L+ N S I S +
Sbjct: 145 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 191
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 28/170 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-----------KSFI-AECETLRNVRHRNLVKL-I 708
+++ +IG+GSFG V + S K F E + +R + H N+V+L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHN 757
SS + K+ +L LV +++ H R + + +L Y+H+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTH 806
+ H D+KP N+LLD + K+ DFG A+ L+ N S I S +
Sbjct: 141 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 28/170 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-----------KSFI-AECETLRNVRHRNLVKL-I 708
+++ +IG+GSFG V + S K F E + +R + H N+V+L
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 81
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHN 757
SS + K+ +L LV +++ H R + + +L Y+H+
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 141
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTH 806
+ H D+KP N+LLD + K+ DFG A+ L+ N S I S +
Sbjct: 142 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 188
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 25/126 (19%)
Query: 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHN 757
+ SC +S+ L V E+++ G L H +R+ +L +I+ AL+YLH
Sbjct: 71 LHSCFQTESR----LFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYLH- 123
Query: 758 DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPP 817
E +++ DLK N+LLD E K+ D+G+ + L D +T F G+ Y+ P
Sbjct: 124 --ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD------TTSXFCGTPNYIAP 175
Query: 818 EYGLGE 823
E GE
Sbjct: 176 EILRGE 181
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 28/170 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-----------KSFI-AECETLRNVRHRNLVKL-I 708
+++ +IG+GSFG V + S K F E + +R + H N+V+L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHN 757
SS + K+ +L LV +++ H R + + +L Y+H+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTH 806
+ H D+KP N+LLD + K+ DFG A+ L+ N S I S +
Sbjct: 141 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 48/192 (25%)
Query: 669 IGSGSFGSVL--HNERTG--------------SWKSFIAECETLRNVRHRNLVKLITSCS 712
+G G+FG V N+ T + ++ E + L + H N+VKL+ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 713 SLDSKNMEFLALVYEFLSNGSLGD-WIHGER-----------KNELDITSALDYLHNDCE 760
++ L ++ EF + G++ + ER K LD AL+YLH++
Sbjct: 105 YENN-----LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHDN-- 154
Query: 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYG 820
++H DLK GNIL + K+ DFG++ N I F+G+ ++ PE
Sbjct: 155 -KIIHRDLKAGNILFTLDGDIKLADFGVS------AKNTRXIQRRDXFIGTPYWMAPEVV 207
Query: 821 LGERPSTAGDVP 832
+ E T+ D P
Sbjct: 208 MCE---TSKDRP 216
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 28/170 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-----------KSFI-AECETLRNVRHRNLVKL-I 708
+++ +IG+GSFG V + S K F E + +R + H N+V+L
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 88
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHN 757
SS + K+ +L LV +++ H R + + +L Y+H+
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 148
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTH 806
+ H D+KP N+LLD + K+ DFG A+ L+ N S I S +
Sbjct: 149 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 195
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 28/170 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-----------KSFI-AECETLRNVRHRNLVKL-I 708
+++ +IG+GSFG V + S K F E + +R + H N+V+L
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHN 757
SS + K+ +L LV +++ H R + + +L Y+H+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTH 806
+ H D+KP N+LLD + K+ DFG A+ L+ N S I S +
Sbjct: 153 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 199
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 28/170 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-----------KSFI-AECETLRNVRHRNLVKL-I 708
+++ +IG+GSFG V + S K F E + +R + H N+V+L
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 99
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHN 757
SS + K+ +L LV +++ H R + + +L Y+H+
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 159
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTH 806
+ H D+KP N+LLD + K+ DFG A+ L+ N S I S +
Sbjct: 160 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 206
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 28/170 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-----------KSFI-AECETLRNVRHRNLVKL-I 708
+++ +IG+GSFG V + S K F E + +R + H N+V+L
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHN 757
SS + K+ +L LV +++ H R + + +L Y+H+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTH 806
+ H D+KP N+LLD + K+ DFG A+ L+ N S I S +
Sbjct: 153 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 199
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 28/168 (16%)
Query: 688 SFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE----RK 743
F+ E L+ H N+V+LI C+ + + +V E + G ++ E R
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCT-----QKQPIYIVMELVQGGDFLTFLRTEGARLRV 212
Query: 744 NEL-----DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798
L D + ++YL + C +H DL N L+ E+ K+ DFG++R E D
Sbjct: 213 KTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR---EEADG 266
Query: 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
+ S G + VP ++ E + +SES F I+ W
Sbjct: 267 VYAAS------GGLRQVPVKWTAPEALNYGRY--SSESDVWSFGILLW 306
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 25/126 (19%)
Query: 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHN 757
+ SC +S+ L V E+++ G L H +R+ +L +I+ AL+YLH
Sbjct: 75 LHSCFQTESR----LFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYLH- 127
Query: 758 DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPP 817
E +++ DLK N+LLD E K+ D+G+ + L D +T F G+ Y+ P
Sbjct: 128 --ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD------TTSXFCGTPNYIAP 179
Query: 818 EYGLGE 823
E GE
Sbjct: 180 EILRGE 185
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 57/219 (26%)
Query: 662 NFSHENLIGSGSFGSVL----------------------HNERTGSWKSFIAECETLRNV 699
N S + ++G+G FG V + E+ + F+ E +
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQF 101
Query: 700 RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDIT---------- 749
H N+++L + +K+ + +V E++ NGSL ++ RK++ T
Sbjct: 102 DHPNIIRL----EGVVTKSKPVM-IVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRG 153
Query: 750 --SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
S + YL ++ VH DL NIL++ + KV DFGL+R L D+ + +T
Sbjct: 154 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRG 207
Query: 808 FMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
I + PE + ++A DV + + IV W
Sbjct: 208 GKIPIRWTSPEAIAYRKFTSASDVWS-------YGIVLW 239
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 20/128 (15%)
Query: 721 FLALVYEFLSNGSLGDWIHG-----ERKNE------LDITSALDYLHNDCEVPVVHSDLK 769
+L + + +L DW++G ER+ L I A+++LH+ ++H DLK
Sbjct: 89 YLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLK 145
Query: 770 PGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVF---MGSIG---YVPPEYGLGE 823
P NI + KVGDFGL + + + Q+ ++ + G +G Y+ PE G
Sbjct: 146 PSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN 205
Query: 824 RPSTAGDV 831
S D+
Sbjct: 206 SYSHKVDI 213
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 28/170 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-----------KSFI-AECETLRNVRHRNLVKL-I 708
+++ +IG+GSFG V + S K F E + +R + H N+V+L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHN 757
SS + K+ +L LV +++ H R + + +L Y+H+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTH 806
+ H D+KP N+LLD + K+ DFG A+ L+ N S I S +
Sbjct: 141 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 57/219 (26%)
Query: 662 NFSHENLIGSGSFGSVL----------------------HNERTGSWKSFIAECETLRNV 699
N S + ++G+G FG V + E+ + F+ E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQF 103
Query: 700 RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDIT---------- 749
H N+++L + +K+ + +V E++ NGSL ++ RK++ T
Sbjct: 104 DHPNIIRL----EGVVTKSKPVM-IVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRG 155
Query: 750 --SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
S + YL ++ VH DL NIL++ + KV DFGL+R L D+ + +T
Sbjct: 156 IASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRG 209
Query: 808 FMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
I + PE + ++A DV + + IV W
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWS-------YGIVLW 241
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 65/262 (24%), Positives = 108/262 (41%), Gaps = 63/262 (24%)
Query: 668 LIGSGSFGSVLH------------------NERTGSWKSFIAECETLRNVRHRNLVKLIT 709
++G GSFG VL + + + + E E L+ + H N++KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 710 SCSSLDSKNMEFLALVYEFLSNGSLGD-WIHGERKNELD-------ITSALDYLHNDCEV 761
S +V E + G L D I +R +E D + S + Y+H
Sbjct: 89 ILEDSSS-----FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH--- 140
Query: 762 PVVHSDLKPGNILL---DEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
+VH DLKP NILL +++ K+ DFGL+ + + I + + Y+ PE
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY-------YIAPE 193
Query: 819 YGLGERPS-----TAGDV-----PTSESFAG--EFNIVKWVES-----NLPENVLQVLDP 861
G +AG + + F G E++I+K VE+ +LP+ D
Sbjct: 194 VLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 862 E--LRQLMTSNESQTIQLHDCL 881
+ +R+++T + S I CL
Sbjct: 254 KDLIRKMLTFHPSLRITATQCL 275
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 65/262 (24%), Positives = 108/262 (41%), Gaps = 63/262 (24%)
Query: 668 LIGSGSFGSVLH------------------NERTGSWKSFIAECETLRNVRHRNLVKLIT 709
++G GSFG VL + + + + E E L+ + H N++KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 710 SCSSLDSKNMEFLALVYEFLSNGSLGD-WIHGERKNELD-------ITSALDYLHNDCEV 761
S +V E + G L D I +R +E D + S + Y+H
Sbjct: 89 ILEDSSS-----FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH--- 140
Query: 762 PVVHSDLKPGNILL---DEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
+VH DLKP NILL +++ K+ DFGL+ + + I + + Y+ PE
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY-------YIAPE 193
Query: 819 YGLGERPS-----TAGDV-----PTSESFAG--EFNIVKWVES-----NLPENVLQVLDP 861
G +AG + + F G E++I+K VE+ +LP+ D
Sbjct: 194 VLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 862 E--LRQLMTSNESQTIQLHDCL 881
+ +R+++T + S I CL
Sbjct: 254 KDLIRKMLTFHPSLRITATQCL 275
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789
+ YLHN+ V+H DLK GN+ L+++M K+GDFGLA
Sbjct: 138 GVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 173
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 57/219 (26%)
Query: 662 NFSHENLIGSGSFGSVL----------------------HNERTGSWKSFIAECETLRNV 699
N S + ++G+G FG V + E+ + F+ E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQF 103
Query: 700 RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDIT---------- 749
H N+++L + +K+ + +V E++ NGSL ++ RK++ T
Sbjct: 104 DHPNIIRL----EGVVTKSKPVM-IVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRG 155
Query: 750 --SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
S + YL ++ VH DL NIL++ + KV DFGL+R L D+ + +T
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRG 209
Query: 808 FMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
I + PE + ++A DV + + IV W
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWS-------YGIVLW 241
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 57/219 (26%)
Query: 662 NFSHENLIGSGSFGSVL----------------------HNERTGSWKSFIAECETLRNV 699
N S + ++G+G FG V + E+ + F+ E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQF 103
Query: 700 RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDIT---------- 749
H N+++L + +K+ + +V E++ NGSL ++ RK++ T
Sbjct: 104 DHPNIIRL----EGVVTKSKPVM-IVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRG 155
Query: 750 --SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
S + YL ++ VH DL NIL++ + KV DFGL+R L D+ + +T
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRG 209
Query: 808 FMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
I + PE + ++A DV + + IV W
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWS-------YGIVLW 241
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 57/219 (26%)
Query: 662 NFSHENLIGSGSFGSVL----------------------HNERTGSWKSFIAECETLRNV 699
N S + ++G+G FG V + E+ + F+ E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQF 103
Query: 700 RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDIT---------- 749
H N+++L + +K+ + +V E++ NGSL ++ RK++ T
Sbjct: 104 DHPNIIRL----EGVVTKSKPVM-IVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRG 155
Query: 750 --SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
S + YL ++ VH DL NIL++ + KV DFGL+R L D+ + +T
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRG 209
Query: 808 FMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
I + PE + ++A DV + + IV W
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWS-------YGIVLW 241
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 28/170 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-----------KSFI-AECETLRNVRHRNLVKL-I 708
+++ +IG+GSFG V + S K F E + +R + H N+V+L
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHN 757
SS + K+ +L LV +++ H R + + +L Y+H+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTH 806
+ H D+KP N+LLD + K+ DFG A+ L+ N S I S +
Sbjct: 175 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 221
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 20/126 (15%)
Query: 701 HRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITSAL 752
H N+VK N+++L L E+ S G L D I + ++ + + +
Sbjct: 63 HENVVKFY---GHRREGNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 753 DYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSI 812
YLH + + H D+KP N+LLDE K+ DFGLA R +N+ + + G++
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCGTL 170
Query: 813 GYVPPE 818
YV PE
Sbjct: 171 PYVAPE 176
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 52/173 (30%)
Query: 662 NFSHENLIGSGSFGSVLHN-------------ERTGSWKS------FIAECETLRNV-RH 701
+ +++IG G+FG VL +R + S F E E L + H
Sbjct: 26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 85
Query: 702 RNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE---------------- 745
N++ L+ +C ++ +L L E+ +G+L D++ R E
Sbjct: 86 PNIINLLGAC-----EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 140
Query: 746 --------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
D+ +DYL + +H DL NIL+ E AK+ DFGL+R
Sbjct: 141 SQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 52/173 (30%)
Query: 662 NFSHENLIGSGSFGSVLHN-------------ERTGSWKS------FIAECETLRNV-RH 701
+ +++IG G+FG VL +R + S F E E L + H
Sbjct: 16 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 75
Query: 702 RNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE---------------- 745
N++ L+ +C ++ +L L E+ +G+L D++ R E
Sbjct: 76 PNIINLLGAC-----EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 130
Query: 746 --------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
D+ +DYL + +H DL NIL+ E AK+ DFGL+R
Sbjct: 131 SQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 57/219 (26%)
Query: 662 NFSHENLIGSGSFGSVL----------------------HNERTGSWKSFIAECETLRNV 699
N S + ++G+G FG V + E+ + F+ E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQF 103
Query: 700 RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDIT---------- 749
H N+++L + +K+ + +V E++ NGSL ++ RK++ T
Sbjct: 104 DHPNIIRL----EGVVTKSKPVM-IVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRG 155
Query: 750 --SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
S + YL ++ VH DL NIL++ + KV DFGL+R L D+ + +T
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRG 209
Query: 808 FMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
I + PE + ++A DV + + IV W
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWS-------YGIVLW 241
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 20/126 (15%)
Query: 701 HRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITSAL 752
H N+VK N+++L L E+ S G L D I + ++ + + +
Sbjct: 64 HENVVKFY---GHRREGNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 753 DYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSI 812
YLH + + H D+KP N+LLDE K+ DFGLA R +N+ + + G++
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCGTL 171
Query: 813 GYVPPE 818
YV PE
Sbjct: 172 PYVAPE 177
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 64/168 (38%), Gaps = 34/168 (20%)
Query: 654 DELRRATGNFSHENLIGSGSFGSVLHNERTGSWKSFIA-------------------ECE 694
D L RA + IG G++G V + F+A E
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 695 TLRNVR---HRNLVKLITSCSSLDSKNMEFLALVYEFLSNG---------SLGDWIHGER 742
LR++ H N+V+L C+ + L LV+E + G +
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 743 KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ LD+LH+ VVH DLKP NIL+ K+ DFGLAR
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR 168
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 64/168 (38%), Gaps = 34/168 (20%)
Query: 654 DELRRATGNFSHENLIGSGSFGSVLHNERTGSWKSFIA-------------------ECE 694
D L RA + IG G++G V + F+A E
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 695 TLRNVR---HRNLVKLITSCSSLDSKNMEFLALVYEFLSNG---------SLGDWIHGER 742
LR++ H N+V+L C+ + L LV+E + G +
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 743 KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ LD+LH+ VVH DLKP NIL+ K+ DFGLAR
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR 168
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 28/170 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-----------KSFI-AECETLRNVRHRNLVKL-I 708
+++ +IG+GSFG V + S K F E + +R + H N+V+L
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 93
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHN 757
SS + K+ +L LV +++ H R + + +L Y+H+
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 153
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTH 806
+ H D+KP N+LLD + K+ DFG A+ L+ N S I S +
Sbjct: 154 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 200
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 28/170 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-----------KSFI-AECETLRNVRHRNLVKL-I 708
+++ +IG+GSFG V + S K F E + +R + H N+V+L
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 85
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHN 757
SS + K+ +L LV +++ H R + + +L Y+H+
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 145
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTH 806
+ H D+KP N+LLD + K+ DFG A+ L+ N S I S +
Sbjct: 146 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 192
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 48/192 (25%)
Query: 669 IGSGSFGSVL--HNERTG--------------SWKSFIAECETLRNVRHRNLVKLITSCS 712
+G G+FG V N+ T + ++ E + L + H N+VKL+ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 713 SLDSKNMEFLALVYEFLSNGSLGD-WIHGER-----------KNELDITSALDYLHNDCE 760
++ L ++ EF + G++ + ER K LD AL+YLH++
Sbjct: 105 YENN-----LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHDN-- 154
Query: 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYG 820
++H DLK GNIL + K+ DFG++ N I F+G+ ++ PE
Sbjct: 155 -KIIHRDLKAGNILFTLDGDIKLADFGVS------AKNTRXIQRRDSFIGTPYWMAPEVV 207
Query: 821 LGERPSTAGDVP 832
+ E T+ D P
Sbjct: 208 MCE---TSKDRP 216
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 28/170 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-----------KSFI-AECETLRNVRHRNLVKL-I 708
+++ +IG+GSFG V + S K F E + +R + H N+V+L
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 116
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHN 757
SS + K+ +L LV +++ H R + + +L Y+H+
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 176
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTH 806
+ H D+KP N+LLD + K+ DFG A+ L+ N S I S +
Sbjct: 177 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 223
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 28/170 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-----------KSFI-AECETLRNVRHRNLVKL-I 708
+++ +IG+GSFG V + S K F E + +R + H N+V+L
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 159
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHN 757
SS + K+ +L LV +++ H R + + +L Y+H+
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 219
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTH 806
+ H D+KP N+LLD + K+ DFG A+ L+ N S I S +
Sbjct: 220 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 266
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 28/170 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-----------KSFI-AECETLRNVRHRNLVKL-I 708
+++ +IG+GSFG V + S K F E + +R + H N+V+L
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 118
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHN 757
SS + K+ +L LV +++ H R + + +L Y+H+
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 178
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTH 806
+ H D+KP N+LLD + K+ DFG A+ L+ N S I S +
Sbjct: 179 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 225
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 57/219 (26%)
Query: 662 NFSHENLIGSGSFGSVL----------------------HNERTGSWKSFIAECETLRNV 699
N S + ++G+G FG V + E+ + F+ E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQF 103
Query: 700 RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDIT---------- 749
H N+++L + +K+ + +V E++ NGSL ++ RK++ T
Sbjct: 104 DHPNIIRL----EGVVTKSKPVM-IVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRG 155
Query: 750 --SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
S + YL ++ VH DL NIL++ + KV DFGL R L D+ + +T
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL---EDDPEAAYTTRG 209
Query: 808 FMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
I + PE + ++A DV + + IV W
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWS-------YGIVLW 241
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 23/173 (13%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
VW + R + + VG A VC +YD R + + L S F S++H RT
Sbjct: 23 VWEVPQRLQGLRPVGSGAYGSVCS---AYDA--RLRQKVAVKKL--SRPFQSLIHARRT- 74
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFL--ALVYEFLSNGSLGDWIH 739
E L++++H N++ L+ T +S++ + +L L+ L+N +
Sbjct: 75 -----YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALS 129
Query: 740 GERKNEL--DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
E L + L Y+H+ ++H DLKP N+ ++E+ ++ DFGLAR
Sbjct: 130 DEHVQFLVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 28/170 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-----------KSFI-AECETLRNVRHRNLVKL-I 708
+++ +IG+GSFG V + S K F E + +R + H N+V+L
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHN 757
SS + K+ +L LV +++ H R + + +L Y+H+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTH 806
+ H D+KP N+LLD + K+ DFG A+ L+ N S I S +
Sbjct: 175 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 221
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
+W + R + VG A VC + R A S F S++H +RT
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-------PFQSIIHAKRT- 68
Query: 685 SWKSFIAECETLRNVRHRNLVKLI---TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE 741
E L++++H N++ L+ T SL+ N +L L L + + +
Sbjct: 69 -----YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV---THLMGADLNNIVKCQ 120
Query: 742 RKNE-------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + I L Y+H+ ++H DLKP N+ ++E+ K+ DF LAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLAR 173
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
+ ++ Y+HN E + H D+KP NIL+D+ K+ DFG + +++++ S
Sbjct: 160 VLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSR------ 211
Query: 808 FMGSIGYVPPEYGLGERPSTAGDV 831
G+ ++PPE+ E V
Sbjct: 212 --GTYEFMPPEFFSNESSYNGAKV 233
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 28/170 (16%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-----------KSFI-AECETLRNVRHRNLVKL-I 708
+++ +IG+GSFG V + S K F E + +R + H N+V+L
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 108
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-----------LDITSALDYLHN 757
SS + K+ +L LV +++ H R + + +L Y+H+
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 168
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFLLERVDNQSSISSTH 806
+ H D+KP N+LLD + K+ DFG A+ L+ N S I S +
Sbjct: 169 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 215
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 26/138 (18%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK-NELD--- 747
E L+++ H N++KL + ++ LV EF G L + I K +E D
Sbjct: 96 EISLLKSLDHPNIIKLFDVFE-----DKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN 150
Query: 748 ----ITSALDYLHNDCEVPVVHSDLKPGNILLDEE---MTAKVGDFGLARFLLERVDNQS 800
I S + YLH +VH D+KP NILL+ + + K+ DFGL+ F S
Sbjct: 151 IMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF-------S 200
Query: 801 SISSTHVFMGSIGYVPPE 818
+G+ Y+ PE
Sbjct: 201 KDYKLRDRLGTAYYIAPE 218
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 28/175 (16%)
Query: 669 IGSGSFGSVLHNERTGSW-----------KSFIAECETLRNV--RHRNLVKLITSCSSLD 715
IG G FG V + G +S+ E E + V RH N++ I + + D
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAA-DNKD 70
Query: 716 SKNMEFLALVYEFLSNGSLGDW-------IHGERKNELDITSALDYLHNDC-----EVPV 763
+ L LV ++ +GSL D+ + G K L S L +LH + + +
Sbjct: 71 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 130
Query: 764 VHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
H DLK NIL+ + T + D GLA + + I+ H +G+ Y+ PE
Sbjct: 131 AHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHR-VGTKRYMAPE 183
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 28/175 (16%)
Query: 669 IGSGSFGSVLHNERTGSW-----------KSFIAECETLRNV--RHRNLVKLITSCSSLD 715
IG G FG V + G +S+ E E + V RH N++ I + + D
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAA-DNKD 69
Query: 716 SKNMEFLALVYEFLSNGSLGDW-------IHGERKNELDITSALDYLHNDC-----EVPV 763
+ L LV ++ +GSL D+ + G K L S L +LH + + +
Sbjct: 70 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 129
Query: 764 VHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
H DLK NIL+ + T + D GLA + + I+ H +G+ Y+ PE
Sbjct: 130 AHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHR-VGTKRYMAPE 182
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 28/175 (16%)
Query: 669 IGSGSFGSVLHNERTGSW-----------KSFIAECETLRNV--RHRNLVKLITSCSSLD 715
IG G FG V + G +S+ E E + V RH N++ I + + D
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAA-DNKD 75
Query: 716 SKNMEFLALVYEFLSNGSLGDW-------IHGERKNELDITSALDYLHNDC-----EVPV 763
+ L LV ++ +GSL D+ + G K L S L +LH + + +
Sbjct: 76 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 135
Query: 764 VHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
H DLK NIL+ + T + D GLA + + I+ H +G+ Y+ PE
Sbjct: 136 AHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHR-VGTKRYMAPE 188
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 28/175 (16%)
Query: 669 IGSGSFGSVLHNERTGSW-----------KSFIAECETLRNV--RHRNLVKLITSCSSLD 715
IG G FG V + G +S+ E E + V RH N++ I + + D
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAA-DNKD 72
Query: 716 SKNMEFLALVYEFLSNGSLGDW-------IHGERKNELDITSALDYLHNDC-----EVPV 763
+ L LV ++ +GSL D+ + G K L S L +LH + + +
Sbjct: 73 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 132
Query: 764 VHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
H DLK NIL+ + T + D GLA + + I+ H +G+ Y+ PE
Sbjct: 133 AHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHR-VGTKRYMAPE 185
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 77/195 (39%), Gaps = 67/195 (34%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
VW + R + + VG A VC +YD R + + L S F S++H RT
Sbjct: 23 VWEVPQRLQGLRPVGSGAYGSVCS---AYDA--RLRQKVAVKKL--SRPFQSLIHARRT- 74
Query: 685 SWKSFIAECETLRNVRHRNLVKL-----------------------------ITSCSSLD 715
E L++++H N++ L I C +L
Sbjct: 75 -----YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALS 129
Query: 716 SKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCEVPVVHSDLKPGNILL 775
++++FL VY+ L L Y+H+ ++H DLKP N+ +
Sbjct: 130 DEHVQFL--VYQLLR--------------------GLKYIHS---AGIIHRDLKPSNVAV 164
Query: 776 DEEMTAKVGDFGLAR 790
+E+ ++ DFGLAR
Sbjct: 165 NEDSELRILDFGLAR 179
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 416 GIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPE 475
G+P+ + + L ++ L+ N I+ +F SL + I GN+ K L
Sbjct: 291 GLPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDL-----YIKGNMRKLDLGT--R 343
Query: 476 EISRLENVVTIDLSDNSLSG----NLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGL 531
+ +LEN+ +DLS + + NL LKN + L+ L ++YN+ G E L
Sbjct: 344 CLEKLENLQKLDLSHSDIEASDCCNL--QLKNLRHLQYLNLSYNEPLGLEDQAFKECPQL 401
Query: 532 EVLDLSSNKLSGSIP-SDLQNLQALRSLNLT 561
E+LD++ L P S QNL LR LNL+
Sbjct: 402 ELLDVAFTHLHVKAPHSPFQNLHLLRVLNLS 432
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 89/224 (39%), Gaps = 33/224 (14%)
Query: 114 EIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVL 173
++ NL L+ LN+S+N G + +L++LD+ + + +NL L+VL
Sbjct: 370 QLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVL 429
Query: 174 NFGKNLLWGSIPPSIANLIPSDLSRLE---------------------NLKVLDLTINRL 212
N LL S +A L DL L +L++L L+ L
Sbjct: 430 NLSHCLLDTSNQHLLAGL--QDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNL 487
Query: 213 AGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNL--LDFIYCFNRFTGKIPGSLH 270
+ + ++ HL L+ N L G D D L +L L N P L
Sbjct: 488 LSIDQQAFHGLRNVNHLDLSHNSLTG----DSMDALSHLKGLYLNMASNNIRIIPPHLLP 543
Query: 271 NLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGD 314
L+ II ++HN L+ T N+ F+ Y +K+ S +
Sbjct: 544 ALSQQSIINLSHNPLDCT----CSNIHFITWYKENLHKLEDSEE 583
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 32/134 (23%)
Query: 421 LANLKKLNQIDLSGN-------------ELTGEIPISFGNFQSLLSIDLSNNRINGNIPK 467
LA L+ L ++L GN ++ G + I + +LLSID
Sbjct: 444 LAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSID------------ 491
Query: 468 GILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAE 527
+ L NV +DLS NSL+G+ ++L + K L L MA N P+++
Sbjct: 492 ------QQAFHGLRNVNHLDLSHNSLTGDSMDALSHLKGL-YLNMASNNIRIIPPHLLPA 544
Query: 528 LKGLEVLDLSSNKL 541
L +++LS N L
Sbjct: 545 LSQQSIINLSHNPL 558
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 77/195 (39%), Gaps = 67/195 (34%)
Query: 625 VWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG 684
VW + R + + VG A VC +YD R + + L S F S++H RT
Sbjct: 15 VWEVPQRLQGLRPVGSGAYGSVCS---AYDA--RLRQKVAVKKL--SRPFQSLIHARRT- 66
Query: 685 SWKSFIAECETLRNVRHRNLVKL-----------------------------ITSCSSLD 715
E L++++H N++ L I C +L
Sbjct: 67 -----YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALS 121
Query: 716 SKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCEVPVVHSDLKPGNILL 775
++++FL VY+ L L Y+H+ ++H DLKP N+ +
Sbjct: 122 DEHVQFL--VYQLLR--------------------GLKYIHS---AGIIHRDLKPSNVAV 156
Query: 776 DEEMTAKVGDFGLAR 790
+E+ ++ DFGLAR
Sbjct: 157 NEDCELRILDFGLAR 171
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 16/104 (15%)
Query: 722 LALVYEFLSNGSLGDWIHGERKNELDITS-------ALDYLHNDCEVPVVHSDLKPGNIL 774
L ++ E+L GS D + +E I + LDYLH++ ++ H D+K N+L
Sbjct: 96 LWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKI---HRDIKAANVL 152
Query: 775 LDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L E+ K+ DFG+A L D Q + F+G+ ++ PE
Sbjct: 153 LSEQGDVKLADFGVAGQL---TDTQ---IKRNTFVGTPFWMAPE 190
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 29/174 (16%)
Query: 662 NFSHENL---IGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVK-LITSCSSLDSK 717
NF H + IG GSFG V ++ + K + + + RN V+ + +
Sbjct: 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL 72
Query: 718 NMEFLA-LVYEFLSNGSL---------GDWIHGERKNE-----------LDITSALDYLH 756
FL L Y F + GD + ++N ++ ALDYL
Sbjct: 73 EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQ 132
Query: 757 NDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
N ++H D+KP NILLDE + DF +A +L R ++++ T +M
Sbjct: 133 NQ---RIIHRDMKPDNILLDEHGHVHITDFNIAA-MLPRETQITTMAGTKPYMA 182
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 15/126 (11%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS- 750
E +R+ +H N+V++ S E L ++ EFL G+L D + R NE I +
Sbjct: 92 EVVIMRDYQHFNVVEMYKSYLV-----GEELWVLMEFLQGGALTDIVSQVRLNEEQIATV 146
Query: 751 ------ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISS 804
AL YLH V+H D+K +ILL + K+ DFG + + V + +
Sbjct: 147 CEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVG 203
Query: 805 THVFMG 810
T +M
Sbjct: 204 TPYWMA 209
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 44/190 (23%)
Query: 669 IGSGSFGSVLH--NERTGSW--------------KSFIAECETLRNVRHRNLVKLITSCS 712
+G G+FG V N+ TG+ + +I E E L H +VKL+ +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 713 SLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHNDCEVP 762
D K L ++ EF G++ D I E L + AL++LH+
Sbjct: 79 H-DGK----LWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---R 129
Query: 763 VVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG 822
++H DLK GN+L+ E ++ DFG++ N ++ F+G+ ++ PE +
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVS------AKNLKTLQKRDSFIGTPYWMAPEVVMC 183
Query: 823 ERPSTAGDVP 832
E T D P
Sbjct: 184 E---TMKDTP 190
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 44/190 (23%)
Query: 669 IGSGSFGSVLH--NERTGSW--------------KSFIAECETLRNVRHRNLVKLITSCS 712
+G G+FG V N+ TG+ + +I E E L H +VKL+ +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 713 SLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSALDYLHNDCEVP 762
D K L ++ EF G++ D I E L + AL++LH+
Sbjct: 87 H-DGK----LWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---R 137
Query: 763 VVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG 822
++H DLK GN+L+ E ++ DFG++ N ++ F+G+ ++ PE +
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVS------AKNLKTLQKRDSFIGTPYWMAPEVVMC 191
Query: 823 ERPSTAGDVP 832
E T D P
Sbjct: 192 E---TMKDTP 198
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 74/180 (41%), Gaps = 44/180 (24%)
Query: 668 LIGSGSFGSVLH------------------NERTGSWKSFIAECETLRNVRHRNLVKLIT 709
++G GSFG VL + + + + E E L+ + H N++KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 710 SCSSLDSKNMEFLALVYEFLSNGSLGDWI-HGERKNELD-------ITSALDYLHNDCEV 761
S +V E + G L D I +R +E D + S + Y+H
Sbjct: 89 ILEDSSS-----FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH--- 140
Query: 762 PVVHSDLKPGNILL---DEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
+VH DLKP NILL +++ K+ DFGL+ + + I G+ Y+ PE
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-------GTAYYIAPE 193
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 29/148 (19%)
Query: 669 IGSGSFGSV---LHNERTG--SW-------------KSFIAECETLRNVRHRNLVKLITS 710
IG GSF +V L E T +W + F E E L+ ++H N+V+ S
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 711 CSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL--------DITSALDYLHNDCEVP 762
S K + + LV E ++G+L ++ + ++ I L +LH P
Sbjct: 94 WES-TVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTP-P 151
Query: 763 VVHSDLKPGNILLDEEM-TAKVGDFGLA 789
++H DLK NI + + K+GD GLA
Sbjct: 152 IIHRDLKCDNIFITGPTGSVKIGDLGLA 179
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 25/169 (14%)
Query: 89 PHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNI--SKLTELK 146
P + +FL Q N + ++ + L RL+ L + N L+ V + ++ L+
Sbjct: 350 PSPSSFTFLNFTQ---NVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLE 406
Query: 147 MLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSI----PPSIANLIPSDLSRLENL 202
LD+ N + D S+ VLN N+L GS+ PP +
Sbjct: 407 TLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKV-------------- 452
Query: 203 KVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNL 251
KVLDL NR+ ++P + ++ +L L +ASNQL +P V D L +L
Sbjct: 453 KVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSL 499
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 69/124 (55%), Gaps = 16/124 (12%)
Query: 473 LPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELL---MAYNQFSGPIPNIVAELK 529
+ + +S LE T+D+S NSL+ + + + C E +L ++ N +G + +
Sbjct: 398 MTKNMSSLE---TLDVSLNSLNSHAYD--RTCAWAESILVLNLSSNMLTGSVFRCLP--P 450
Query: 530 GLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVH---LKGN 586
++VLDL +N++ SIP D+ +LQAL+ LN+ N L+ V +G+F ++++ L N
Sbjct: 451 KVKVLDLHNNRI-MSIPKDVTHLQALQELNVASNQLKSV--PDGVFDRLTSLQYIWLHDN 507
Query: 587 PKLC 590
P C
Sbjct: 508 PWDC 511
Score = 32.7 bits (73), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 20/155 (12%)
Query: 422 ANLKKLNQIDLSGNELTGEIPISF--GNFQSLLSIDLSNNRINGNIPKGILRPLPEEISR 479
+ LK+L + L N L ++ N SL ++D+S N +N + +
Sbjct: 374 STLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSH-------AYDRTCAW 426
Query: 480 LENVVTIDLSDNSLSGN----LPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLD 535
E+++ ++LS N L+G+ LP +K +L +N IP V L+ L+ L+
Sbjct: 427 AESILVLNLSSNMLTGSVFRCLPPKVK-------VLDLHNNRIMSIPKDVTHLQALQELN 479
Query: 536 LSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVP 570
++SN+L L +L+ + L N + P
Sbjct: 480 VASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 34/148 (22%)
Query: 669 IGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLITS 710
IG G++G+V L ++ G S + E L+ ++H+N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 711 CSSLDSKNMEFLALVYEFLSNG--SLGDWIHGERKNEL------DITSALDYLHNDCEVP 762
S D K L LV+EF D +G+ E+ + L + H+
Sbjct: 70 LHS-DKK----LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 763 VVHSDLKPGNILLDEEMTAKVGDFGLAR 790
V+H DLKP N+L++ K+ DFGLAR
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 66/165 (40%), Gaps = 39/165 (23%)
Query: 662 NFSHENLIGSGSFGSVLH---NERTGSW------------------KSFIAECETLRNVR 700
F+ ++G G FGSV + GS+ + F+ E ++
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 701 HRNLVKLI-TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-------------- 745
H ++ KL+ S S + ++ F+ +G L ++ R E
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143
Query: 746 LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+DI ++YL + +H DL N +L E+MT V DFGL+R
Sbjct: 144 VDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSR 185
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 722 LALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVVHSDLKPGNIL 774
L LV E+L +G L D++ R LD + L Y C+ VH DL NIL
Sbjct: 88 LRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 146
Query: 775 LDEEMTAKVGDFGLARFL 792
++ E K+ DFGLA+ L
Sbjct: 147 VESEAHVKIADFGLAKLL 164
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 722 LALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVVHSDLKPGNIL 774
L LV E+L +G L D++ R LD + L Y C+ VH DL NIL
Sbjct: 85 LRLVMEYLPSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 143
Query: 775 LDEEMTAKVGDFGLARFL 792
++ E K+ DFGLA+ L
Sbjct: 144 VESEAHVKIADFGLAKLL 161
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 45/186 (24%)
Query: 663 FSHENLIGSGSFGSVL--HNERTGSW-----------------KSFIAECETLRNVRHRN 703
+ + ++G GSFG V+ ++ TG +S + E + L+ + H N
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 93
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK-NELD-------ITSALDYL 755
++KL + K + LV E + G L D I ++ +E+D + S + Y+
Sbjct: 94 IMKLY---EFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYM 148
Query: 756 HNDCEVPVVHSDLKPGNILLD---EEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSI 812
H + +VH DLKP N+LL+ ++ ++ DFGL+ + I + +
Sbjct: 149 HKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY------ 199
Query: 813 GYVPPE 818
Y+ PE
Sbjct: 200 -YIAPE 204
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 119/269 (44%), Gaps = 41/269 (15%)
Query: 91 IGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDL 150
+ NL+ L ++L +N +S + L L+ LN S N + P ++ LT L+ LD+
Sbjct: 125 LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDI 180
Query: 151 MANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTIN 210
+NK++ +L NL SL N I+++ P L L NL L L N
Sbjct: 181 SSNKVSDISVLAKLTNLESLIATN-----------NQISDITP--LGILTNLDELSLNGN 227
Query: 211 RLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLH 270
+L T+ ++T+L L LA+NQ+ P L L + N+ + P L
Sbjct: 228 QLKDI--GTLASLTNLTDLDLANNQISNLAPL---SGLTKLTELKLGANQISNISP--LA 280
Query: 271 NLTNIQIIRMTHNLLEGTLP-PGLGNLPFLRTYNIGFNKI-----VSSGD--------DE 316
LT + + + N LE P L NL +L Y FN I VSS +
Sbjct: 281 GLTALTNLELNENQLEDISPISNLKNLTYLTLY---FNNISDISPVSSLTKLQRLFFYNN 337
Query: 317 GLSFITSLTNSTHLNYLALDGNQFEGKIP 345
+S ++SL N T++N+L+ NQ P
Sbjct: 338 KVSDVSSLANLTNINWLSAGHNQISDLTP 366
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 137/304 (45%), Gaps = 44/304 (14%)
Query: 94 LSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMAN 153
L+ L I NN+L+ P + NL +L ++I NN Q ++ LT L L L N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKL--VDILMNNNQIADITPLANLTNLTGLTLFNN 117
Query: 154 KITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLA 213
+IT D L+NL +L L N +I+++ S LS L +L+ L+ + N++
Sbjct: 118 QITDI---DPLKNLTNLNRLELSSN--------TISDI--SALSGLTSLQQLNFSSNQVT 164
Query: 214 GTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLT 273
P + N+T+L L ++SN++ V L NL I N+ + P L LT
Sbjct: 165 DLKP--LANLTTLERLDISSNKVSD---ISVLAKLTNLESLIATNNQISDITP--LGILT 217
Query: 274 NIQIIRMTHNLLE--GTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLN 331
N+ + + N L+ GT L +L L ++ N+I + GL T L
Sbjct: 218 NLDELSLNGNQLKDIGT----LASLTNLTDLDLANNQISNLAPLSGL---------TKLT 264
Query: 332 YLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISG 391
L L NQ P + + L+ L L N + P I L++LT L L +N+IS
Sbjct: 265 ELKLGANQISNISP--LAGLT-ALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISD 319
Query: 392 EIPI 395
P+
Sbjct: 320 ISPV 323
Score = 36.6 bits (83), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 159/383 (41%), Gaps = 48/383 (12%)
Query: 194 SDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLD 253
+DL ++ L+ L I + G + + +L + ++NQL P L L+D
Sbjct: 38 TDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITPLK---NLTKLVD 89
Query: 254 FIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSG 313
+ N+ P L NLTN+ + + +N + P L NL L + N I
Sbjct: 90 ILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTI---- 141
Query: 314 DDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASI 373
S I++L+ T L L NQ P + N + L +L + N + + +
Sbjct: 142 -----SDISALSGLTSLQQLNFSSNQVTDLKP--LANLT-TLERLDISSNKVSDI--SVL 191
Query: 374 GRLRSLTLLDLSYNSISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLS 433
+L +L L + N IS P+ I + G +LA+L L +DL+
Sbjct: 192 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG----TLASLTNLTDLDLA 247
Query: 434 GNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSL 493
N+++ P+S L + L N+I+ + PL + L + ++L++N L
Sbjct: 248 NNQISNLAPLS--GLTKLTELKLGANQISN------ISPL----AGLTALTNLELNENQL 295
Query: 494 SGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQ 553
P + N K+L L + +N S P V+ L L+ L +NK+S S L NL
Sbjct: 296 EDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLT 349
Query: 554 ALRSLNLTFNNLEGVVPSEGIFR 576
+ L+ N + + P + R
Sbjct: 350 NINWLSAGHNQISDLTPLANLTR 372
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 67/165 (40%), Gaps = 53/165 (32%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS------------- 750
+VKL+ + ++N L LV+E +H + K +D ++
Sbjct: 63 IVKLL---DVIHTENK--LYLVFEH---------VHQDLKTFMDASALTGIPLPLIKSYL 108
Query: 751 -----ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L + H+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 109 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 722 LALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVVHSDLKPGNIL 774
L LV E+L +G L D++ R LD + L Y C+ VH DL NIL
Sbjct: 101 LRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 159
Query: 775 LDEEMTAKVGDFGLARFL 792
++ E K+ DFGLA+ L
Sbjct: 160 VESEAHVKIADFGLAKLL 177
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 19/135 (14%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSL-GDWIHGERKNELD--- 747
E R ++H N+V+L S S L+++ ++ G L D + E +E D
Sbjct: 71 EARICRLLKHPNIVRLHDSISEEGHHY-----LIFDLVTGGELFEDIVAREYYSEADASH 125
Query: 748 -ITSALDYLHNDCEVPVVHSDLKPGNILLDEEM---TAKVGDFGLARFLLERVDNQSSIS 803
I L+ + + ++ VVH DLKP N+LL ++ K+ DFGLA ++ +
Sbjct: 126 CIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA------IEVEGEQQ 179
Query: 804 STHVFMGSIGYVPPE 818
+ F G+ GY+ PE
Sbjct: 180 AWFGFAGTPGYLSPE 194
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 722 LALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVVHSDLKPGNIL 774
L LV E+L +G L D++ R LD + L Y C+ VH DL NIL
Sbjct: 89 LRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 147
Query: 775 LDEEMTAKVGDFGLARFL 792
++ E K+ DFGLA+ L
Sbjct: 148 VESEAHVKIADFGLAKLL 165
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 57/219 (26%)
Query: 662 NFSHENLIGSGSFGSVL----------------------HNERTGSWKSFIAECETLRNV 699
N S + ++G+G FG V + E+ + F+ E +
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQF 74
Query: 700 RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDIT---------- 749
H N+++L + +K+ + +V E + NGSL ++ RK++ T
Sbjct: 75 DHPNIIRL----EGVVTKSKPVM-IVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRG 126
Query: 750 --SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
S + YL + + VH DL NIL++ + KV DFGL+R L D+ + +T
Sbjct: 127 IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRG 180
Query: 808 FMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
I + PE + ++A DV + + IV W
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWS-------YGIVLW 212
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 35/177 (19%)
Query: 663 FSHENLIGSGSFGSV-LHNERTGSWKSFI----------------AECETLRNVRHRNLV 705
F + +GSG+FG V L ER+ + I AE E L+++ H N++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 706 KLITSCSSLDSKNMEFL-------ALVYEFLSNGSLGDWIHGERKNEL--DITSALDYLH 756
K+ D NM + L+ +S + G + EL + +AL Y H
Sbjct: 84 KIFEVFE--DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 757 NDCEVPVVHSDLKPGNILLDE---EMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
+ VVH DLKP NIL + K+ DFGLA L + ++ ++ + T ++M
Sbjct: 142 SQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAE-LFKSDEHSTNAAGTALYMA 194
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 27/156 (17%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
+ ++ E + L + H N+VKL+ + ++ L ++ EF + G++ D + E + L
Sbjct: 52 EDYMVEIDILASCDHPNIVKLLDAFYYENN-----LWILIEFCAGGAV-DAVMLELERPL 105
Query: 747 ----------DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796
AL+YLH++ ++H DLK GNIL + K+ DFG++
Sbjct: 106 TESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS-----AK 157
Query: 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVP 832
+ ++ I F+G+ ++ PE + E T+ D P
Sbjct: 158 NTRTXIQRRDSFIGTPYWMAPEVVMCE---TSKDRP 190
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 666 ENLIGSGSFGSV----------------LHNERTG----SWKSFIAECETLRNVRHRNLV 705
E +IG+G FG V + + G + F+ E + H N++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 706 KLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE------------LDITSALD 753
L + +K+ + +V E++ NGSL ++ +KN+ I++ +
Sbjct: 87 HL----EGVVTKSKPVM-IVTEYMENGSLDTFL---KKNDGQFTVIQLVGMLRGISAGMK 138
Query: 754 YLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIG 813
YL ++ VH DL NIL++ + KV DFGL+R L D+ + +T I
Sbjct: 139 YLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIR 192
Query: 814 YVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
+ PE + ++A DV + + IV W
Sbjct: 193 WTAPEAIAFRKFTSASDVWS-------YGIVMW 218
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 36/179 (20%)
Query: 669 IGSGSFGSVLHNERTGSWK---------------SFIAECETLRNV--RHRNLVKLITSC 711
IG G +G V G W+ S+ E E + V RH N++ I +
Sbjct: 45 IGKGRYGEVW----MGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAA- 99
Query: 712 SSLDSKNMEFLALVYEFLSNGSLGDWIHG---ERKNELDIT----SALDYLHNDC----- 759
+ + L L+ ++ NGSL D++ + K+ L + S L +LH +
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQG 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
+ + H DLK NIL+ + T + D GLA + + +T V G+ Y+PPE
Sbjct: 160 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV--GTKRYMPPE 216
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 31/154 (20%)
Query: 662 NFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRN 703
NF IG G++G V L E G + I E L+ + H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 704 LVKLITSCSSLDSKNMEFLALVY------EFLSNGSL-GDWIHGERKNELDITSALDYLH 756
+VKL+ + ++N +L + +F+ +L G + + + L + H
Sbjct: 67 IVKLL---DVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 757 NDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ V+H DLKP N+L++ E K+ DFGLAR
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 40/193 (20%)
Query: 648 HPKISYDELRRATGNFSHENLIGSGSFGSVL-----HNERTGSWKSFIAECETLRNVRHR 702
H ++ +EL F+ + IG GSFG V H + + K E +
Sbjct: 12 HSRVDPEEL------FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQ 65
Query: 703 NLVKLITSCSS----------LDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL------ 746
+ +++ C S L S L ++ E+L GS D + E
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTK---LWIIMEYLGGGSALDLLKPGPLEETYIATIL 122
Query: 747 -DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISST 805
+I LDYLH++ ++ H D+K N+LL E+ K+ DFG+A L D Q
Sbjct: 123 REILKGLDYLHSERKI---HRDIKAANVLLSEQGDVKLADFGVAGQL---TDTQ---IKR 173
Query: 806 HVFMGSIGYVPPE 818
+ F+G+ ++ PE
Sbjct: 174 NXFVGTPFWMAPE 186
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 57/219 (26%)
Query: 662 NFSHENLIGSGSFGSVL----------------------HNERTGSWKSFIAECETLRNV 699
N S + ++G+G FG V + E+ + F+ E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQF 103
Query: 700 RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDIT---------- 749
H N+++L + +K+ + +V E + NGSL ++ RK++ T
Sbjct: 104 DHPNIIRL----EGVVTKSKPVM-IVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRG 155
Query: 750 --SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
S + YL ++ VH DL NIL++ + KV DFGL+R L D+ + +T
Sbjct: 156 IASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRG 209
Query: 808 FMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
I + PE + ++A DV + + IV W
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWS-------YGIVLW 241
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 690 IAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNG---SLGDW-----IHGE 741
I E L++++H N+V L + S L LV+E+L L D +H
Sbjct: 48 IREVSLLKDLKHANIVTLHDIIHTEKS-----LTLVFEYLDKDLKQYLDDCGNIINMHNV 102
Query: 742 RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + L Y H V+H DLKP N+L++E K+ DFGLAR
Sbjct: 103 KLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%)
Query: 479 RLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSS 538
RL ++V ++L N L+G PN+ + ++EL + N+ + L L+ L+L
Sbjct: 52 RLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYD 111
Query: 539 NKLSGSIPSDLQNLQALRSLNLTFN 563
N++S +P ++L +L SLNL N
Sbjct: 112 NQISCVMPGSFEHLNSLTSLNLASN 136
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 421 LANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRL 480
L L +++L N+LTG P +F + + L N+I K L L
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLG--------L 101
Query: 481 ENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQF 517
+ T++L DN +S +P S ++ SL L +A N F
Sbjct: 102 HQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPF 138
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Query: 488 LSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPS 547
+S + L G LP+ +K L + NQ +G PN ++ L L NK+
Sbjct: 44 ISSDGLFGRLPHLVK-------LELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNK 96
Query: 548 DLQNLQALRSLNLTFNNLEGVVPSEGIFRN---MSNVHLKGNPKLC 590
L L++LNL N + V+P G F + +++++L NP C
Sbjct: 97 MFLGLHQLKTLNLYDNQISCVMP--GSFEHLNSLTSLNLASNPFNC 140
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 19/108 (17%)
Query: 720 EFLALVYEFLSNGSLGDWIHGERKNELD---------ITSALDYLHNDCEVPVVHSDLKP 770
+F+ +V E SL + +H RK + + YLHN+ V+H DLK
Sbjct: 115 DFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKL 170
Query: 771 GNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
GN+ L+++M K+GDFGLA +++ T G+ Y+ PE
Sbjct: 171 GNLFLNDDMDVKIGDFGLA----TKIEFDGERKKT--LCGTPNYIAPE 212
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 720 EFLALVYEFLSNGSLGDWIHGERKNELD---------ITSALDYLHNDCEVPVVHSDLKP 770
+F+ +V E SL + +H RK + + YLHN+ V+H DLK
Sbjct: 115 DFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKL 170
Query: 771 GNILLDEEMTAKVGDFGLA 789
GN+ L+++M K+GDFGLA
Sbjct: 171 GNLFLNDDMDVKIGDFGLA 189
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 19/108 (17%)
Query: 720 EFLALVYEFLSNGSLGDWIHGERKNELD---------ITSALDYLHNDCEVPVVHSDLKP 770
+F+ +V E SL + +H RK + I YLH + V+H DLK
Sbjct: 88 DFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKL 143
Query: 771 GNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
GN+ L+E++ K+GDFGLA +V+ V G+ Y+ PE
Sbjct: 144 GNLFLNEDLEVKIGDFGLA----TKVEYDG--ERKKVLCGTPNYIAPE 185
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 720 EFLALVYEFLSNGSLGDWIHGERKNELD---------ITSALDYLHNDCEVPVVHSDLKP 770
+F+ +V E SL + +H RK + + YLHN+ V+H DLK
Sbjct: 115 DFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKL 170
Query: 771 GNILLDEEMTAKVGDFGLA 789
GN+ L+++M K+GDFGLA
Sbjct: 171 GNLFLNDDMDVKIGDFGLA 189
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
L+ V H+N++ L+ + K +E VY L + +L IH E +E
Sbjct: 77 LKCVNHKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQ 134
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 135 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 19/108 (17%)
Query: 720 EFLALVYEFLSNGSLGDWIHGERKNELD---------ITSALDYLHNDCEVPVVHSDLKP 770
+F+ +V E SL + +H RK + I YLH + V+H DLK
Sbjct: 90 DFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKL 145
Query: 771 GNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
GN+ L+E++ K+GDFGLA +V+ T G+ Y+ PE
Sbjct: 146 GNLFLNEDLEVKIGDFGLA----TKVEYDGERKKT--LCGTPNYIAPE 187
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
L+ V H+N++ L+ + K +E VY L + +L IH E +E
Sbjct: 75 LKCVNHKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQ 132
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 133 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 172
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 19/108 (17%)
Query: 720 EFLALVYEFLSNGSLGDWIHGERKNELD---------ITSALDYLHNDCEVPVVHSDLKP 770
+F+ +V E SL + +H RK + I YLH + V+H DLK
Sbjct: 94 DFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKL 149
Query: 771 GNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
GN+ L+E++ K+GDFGLA +V+ T G+ Y+ PE
Sbjct: 150 GNLFLNEDLEVKIGDFGLA----TKVEYDGERKKT--LCGTPNYIAPE 191
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Query: 722 LALVYEFLSNGSLGDWIHGERKNELDITS-------ALDYLHNDCEVPVVHSDLKPGNIL 774
L +V E+L+ GSL D + +E I + AL++LH++ V+H D+K NIL
Sbjct: 92 LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNIL 148
Query: 775 LDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYG 820
L + + K+ DFG + +S++ T +M YG
Sbjct: 149 LGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 194
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 57/219 (26%)
Query: 662 NFSHENLIGSGSFGSVL----------------------HNERTGSWKSFIAECETLRNV 699
N S + ++G+G FG V + E+ + F+ E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQF 103
Query: 700 RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDIT---------- 749
H N+++L + +K+ + +V E + NGSL ++ RK++ T
Sbjct: 104 DHPNIIRL----EGVVTKSKPVM-IVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRG 155
Query: 750 --SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
S + YL ++ VH DL NIL++ + KV DFGL+R L D+ + +T
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRG 209
Query: 808 FMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
I + PE + ++A DV + + IV W
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWS-------YGIVLW 241
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 42/182 (23%)
Query: 669 IGSGSFGSVL--HNERTG---SWKSFIA-------------ECETLRNVRHRNLVKLITS 710
IG GS+G V N TG + K F+ E L+ ++H NLV L+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 711 CSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDIT--------SALDYLH-NDCEV 761
+ L LV+E+ + L + +R + A+++ H ++C
Sbjct: 71 -----FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC-- 123
Query: 762 PVVHSDLKPGNILLDEEMTAKVGDFGLARFLL---ERVDNQSS---ISSTHVFMGSIGYV 815
+H D+KP NIL+ + K+ DFG AR L + D++ + S + +G Y
Sbjct: 124 --IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYG 181
Query: 816 PP 817
PP
Sbjct: 182 PP 183
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 19/108 (17%)
Query: 720 EFLALVYEFLSNGSLGDWIHGERKNELD---------ITSALDYLHNDCEVPVVHSDLKP 770
+F+ +V E SL + +H RK + I YLH + V+H DLK
Sbjct: 90 DFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKL 145
Query: 771 GNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
GN+ L+E++ K+GDFGLA +V+ T G+ Y+ PE
Sbjct: 146 GNLFLNEDLEVKIGDFGLA----TKVEYDGERKKT--LCGTPNYIAPE 187
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 45/189 (23%)
Query: 660 TGNFSHENLIGSGSFGSVL--HNERTGSW-----------------KSFIAECETLRNVR 700
+ + + ++G GSFG V+ ++ TG +S + E + L+ +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 701 HRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK-NELD-------ITSAL 752
H N++KL ++ + LV E + G L D I ++ +E+D + S +
Sbjct: 85 HPNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 139
Query: 753 DYLHNDCEVPVVHSDLKPGNILLD---EEMTAKVGDFGLARFLLERVDNQSSISSTHVFM 809
Y+H + +VH DLKP N+LL+ ++ ++ DFGL+ + I
Sbjct: 140 TYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI------- 189
Query: 810 GSIGYVPPE 818
G+ Y+ PE
Sbjct: 190 GTAYYIAPE 198
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 19/108 (17%)
Query: 720 EFLALVYEFLSNGSLGDWIHGERKNELD---------ITSALDYLHNDCEVPVVHSDLKP 770
+F+ +V E SL + +H RK + I YLH + V+H DLK
Sbjct: 112 DFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKL 167
Query: 771 GNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
GN+ L+E++ K+GDFGLA +V+ V G+ Y+ PE
Sbjct: 168 GNLFLNEDLEVKIGDFGLA----TKVEYDG--ERKKVLCGTPNYIAPE 209
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 92/236 (38%), Gaps = 62/236 (26%)
Query: 652 SYDELRRATGNFSHE---------NLIGSGSFGSVLHNE----------------RTG-- 684
+Y+E RA +F+ E +IGSG G V + + G
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 685 --SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER 742
+ F++E + H N+++L + +V E++ NGSL ++ R
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVT-----RGRLAMIVTEYMENGSLDTFL---R 142
Query: 743 KNELDIT------------SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
++ T + + YL ++ VH DL N+L+D + KV DFGL+R
Sbjct: 143 THDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199
Query: 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
L + D + + + I + PE S+A DV + F +V W
Sbjct: 200 VLEDDPDAAXTTTGGKI---PIRWTAPEAIAFRTFSSASDVWS-------FGVVMW 245
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 70/173 (40%), Gaps = 52/173 (30%)
Query: 662 NFSHENLIGSGSFGSVLHN-------------ERTGSWKS------FIAECETLRNV-RH 701
+ +++IG G+FG VL +R + S F E E L + H
Sbjct: 23 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 82
Query: 702 RNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE---------------- 745
N++ L+ +C ++ +L L E+ +G+L D++ R E
Sbjct: 83 PNIINLLGAC-----EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 137
Query: 746 --------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
D+ +DYL + +H +L NIL+ E AK+ DFGL+R
Sbjct: 138 SQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 25/155 (16%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
+ F+ E T+R H ++VKLI + ++N + ++ E + G L ++ RK L
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLI----GVITENP--VWIIMELCTLGELRSFLQV-RKFSL 108
Query: 747 DITS----------ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796
D+ S AL YL + VH D+ N+L+ K+GDFGL+R++ +
Sbjct: 109 DLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 165
Query: 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
++S I ++ PE R ++A DV
Sbjct: 166 XXKASKGKL-----PIKWMAPESINFRRFTSASDV 195
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 75/179 (41%), Gaps = 36/179 (20%)
Query: 663 FSHENLIGSGSFGSVL-----HNERTGSWKSFIAECETLRNVRHRNLVKLITSCSS---- 713
F+ IG GSFG V ++ + K E + + +++ C S
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 714 -------LDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITS-------ALDYLHNDC 759
D+K L ++ E+L GS D + +E I + LDYLH++
Sbjct: 89 KYYGSYLKDTK----LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEK 144
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
++ H D+K N+LL E K+ DFG+A L D Q + F+G+ ++ PE
Sbjct: 145 KI---HRDIKAANVLLSEHGEVKLADFGVAGQL---TDTQ---IKRNTFVGTPFWMAPE 194
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 45/189 (23%)
Query: 660 TGNFSHENLIGSGSFGSVL--HNERTGSW-----------------KSFIAECETLRNVR 700
+ + + ++G GSFG V+ ++ TG +S + E + L+ +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 701 HRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK-NELD-------ITSAL 752
H N++KL ++ + LV E + G L D I ++ +E+D + S +
Sbjct: 108 HPNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 162
Query: 753 DYLHNDCEVPVVHSDLKPGNILLD---EEMTAKVGDFGLARFLLERVDNQSSISSTHVFM 809
Y+H + +VH DLKP N+LL+ ++ ++ DFGL+ + I
Sbjct: 163 TYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI------- 212
Query: 810 GSIGYVPPE 818
G+ Y+ PE
Sbjct: 213 GTAYYIAPE 221
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 19/108 (17%)
Query: 720 EFLALVYEFLSNGSLGDWIHGERKNELD---------ITSALDYLHNDCEVPVVHSDLKP 770
+F+ +V E SL + +H RK + I YLH + V+H DLK
Sbjct: 114 DFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKL 169
Query: 771 GNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
GN+ L+E++ K+GDFGLA +V+ V G+ Y+ PE
Sbjct: 170 GNLFLNEDLEVKIGDFGLA----TKVEYDG--ERKKVLCGTPNYIAPE 211
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 45/189 (23%)
Query: 660 TGNFSHENLIGSGSFGSVL--HNERTGSW-----------------KSFIAECETLRNVR 700
+ + + ++G GSFG V+ ++ TG +S + E + L+ +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 701 HRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK-NELD-------ITSAL 752
H N++KL ++ + LV E + G L D I ++ +E+D + S +
Sbjct: 109 HPNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 163
Query: 753 DYLHNDCEVPVVHSDLKPGNILLD---EEMTAKVGDFGLARFLLERVDNQSSISSTHVFM 809
Y+H + +VH DLKP N+LL+ ++ ++ DFGL+ + I
Sbjct: 164 TYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI------- 213
Query: 810 GSIGYVPPE 818
G+ Y+ PE
Sbjct: 214 GTAYYIAPE 222
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 87/209 (41%), Gaps = 48/209 (22%)
Query: 652 SYDELRRATGNFSHENLIGSGSFGSV------------------LHNERTGSWKSFIAEC 693
S D RR T +G G++G V L +E G + I E
Sbjct: 32 SIDRYRRITK-------LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREV 84
Query: 694 ETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALD 753
L+ ++HRN+++L S+ N L L++E+ N L ++ + + +
Sbjct: 85 SLLKELQHRNIIEL----KSVIHHNHR-LHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFL 138
Query: 754 YL----HNDCEV-PVVHSDLKPGNILL-----DEEMTAKVGDFGLARFLLERVDNQSSIS 803
Y N C +H DLKP N+LL E K+GDFGLAR +
Sbjct: 139 YQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ----- 193
Query: 804 STHVFMGSIGYVPPEYGLGERP-STAGDV 831
TH + ++ Y PPE LG R ST+ D+
Sbjct: 194 FTHEII-TLWYRPPEILLGSRHYSTSVDI 221
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
+ + E + + + + +V+LI C + E L LV E G L ++ G+R+ E+
Sbjct: 55 EEMMREAQIMHQLDNPYIVRLIGVCQA------EALMLVMEMAGGGPLHKFLVGKRE-EI 107
Query: 747 DITSALDYLHNDC-------EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
+++ + LH E VH DL N+LL AK+ DFGL++ L
Sbjct: 108 PVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 25/155 (16%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
+ F+ E T+R H ++VKLI + ++N + ++ E + G L ++ RK L
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLI----GVITENP--VWIIMELCTLGELRSFLQV-RKYSL 108
Query: 747 DITS----------ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796
D+ S AL YL + VH D+ N+L+ K+GDFGL+R++ +
Sbjct: 109 DLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 165
Query: 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
++S I ++ PE R ++A DV
Sbjct: 166 YYKASKGKL-----PIKWMAPESINFRRFTSASDV 195
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 25/155 (16%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
+ F+ E T+R H ++VKLI + ++N + ++ E + G L ++ RK L
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLI----GVITENP--VWIIMELCTLGELRSFLQV-RKYSL 108
Query: 747 DITS----------ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796
D+ S AL YL + VH D+ N+L+ K+GDFGL+R++ +
Sbjct: 109 DLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 165
Query: 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
++S I ++ PE R ++A DV
Sbjct: 166 YYKASKGKL-----PIKWMAPESINFRRFTSASDV 195
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 25/155 (16%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
+ F+ E T+R H ++VKLI + ++N + ++ E + G L ++ RK L
Sbjct: 84 EKFLQEALTMRQFDHPHIVKLI----GVITENP--VWIIMELCTLGELRSFLQV-RKYSL 136
Query: 747 DITS----------ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796
D+ S AL YL + VH D+ N+L+ K+GDFGL+R++ +
Sbjct: 137 DLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 193
Query: 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
++S I ++ PE R ++A DV
Sbjct: 194 YYKASKGKL-----PIKWMAPESINFRRFTSASDV 223
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 92/236 (38%), Gaps = 62/236 (26%)
Query: 652 SYDELRRATGNFSHE---------NLIGSGSFGSVLHNE----------------RTG-- 684
+Y+E RA +F+ E +IGSG G V + + G
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 685 --SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER 742
+ F++E + H N+++L + +V E++ NGSL ++ R
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVT-----RGRLAMIVTEYMENGSLDTFL---R 142
Query: 743 KNELDIT------------SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
++ T + + YL ++ VH DL N+L+D + KV DFGL+R
Sbjct: 143 THDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199
Query: 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
L + D + + + I + PE S+A DV + F +V W
Sbjct: 200 VLEDDPDAAYTTTGGKI---PIRWTAPEAIAFRTFSSASDVWS-------FGVVMW 245
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 25/155 (16%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
+ F+ E T+R H ++VKLI + ++N + ++ E + G L ++ RK L
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLI----GVITENP--VWIIMELCTLGELRSFLQ-VRKYSL 113
Query: 747 DITS----------ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796
D+ S AL YL + VH D+ N+L+ K+GDFGL+R++ +
Sbjct: 114 DLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170
Query: 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
++S I ++ PE R ++A DV
Sbjct: 171 YYKASKGKL-----PIKWMAPESINFRRFTSASDV 200
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 752 LDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
L Y+H+ V+H DLKP N+L++E K+GDFG+AR L
Sbjct: 172 LKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGL 209
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 25/155 (16%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
+ F+ E T+R H ++VKLI + ++N + ++ E + G L ++ RK L
Sbjct: 53 EKFLQEALTMRQFDHPHIVKLI----GVITENP--VWIIMELCTLGELRSFLQV-RKYSL 105
Query: 747 DITS----------ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796
D+ S AL YL + VH D+ N+L+ K+GDFGL+R++ +
Sbjct: 106 DLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 162
Query: 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
++S I ++ PE R ++A DV
Sbjct: 163 YYKASKGKL-----PIKWMAPESINFRRFTSASDV 192
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 722 LALVYEFLSNGSLGDWIHGERKNELDITS-------ALDYLHNDCEVPVVHSDLKPGNIL 774
L +V E+L+ GSL D + +E I + AL++LH++ V+H D+K NIL
Sbjct: 92 LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNIL 148
Query: 775 LDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYG 820
L + + K+ DFG + +S + T +M YG
Sbjct: 149 LGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYG 194
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 25/155 (16%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
+ F+ E T+R H ++VKLI + ++N + ++ E + G L ++ RK L
Sbjct: 59 EKFLQEALTMRQFDHPHIVKLI----GVITENP--VWIIMELCTLGELRSFLQV-RKYSL 111
Query: 747 DITS----------ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796
D+ S AL YL + VH D+ N+L+ K+GDFGL+R++ +
Sbjct: 112 DLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 168
Query: 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
++S I ++ PE R ++A DV
Sbjct: 169 YYKASKGKL-----PIKWMAPESINFRRFTSASDV 198
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 25/155 (16%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
+ F+ E T+R H ++VKLI + ++N + ++ E + G L ++ RK L
Sbjct: 58 EKFLQEALTMRQFDHPHIVKLI----GVITENP--VWIIMELCTLGELRSFLQV-RKYSL 110
Query: 747 DITS----------ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796
D+ S AL YL + VH D+ N+L+ K+GDFGL+R++ +
Sbjct: 111 DLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 167
Query: 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
++S I ++ PE R ++A DV
Sbjct: 168 YYKASKGKL-----PIKWMAPESINFRRFTSASDV 197
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 752 LDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
L Y+H+ V+H DLKP N+L++E K+GDFG+AR L
Sbjct: 171 LKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 52/204 (25%)
Query: 669 IGSGSFGSVLH--NERTGS-------WKSFIAECETLRNVR----------HRNLVKLIT 709
+G G++G V + RTG + +F + R R H N+V L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL- 75
Query: 710 SCSSLDSKNMEFLALVYEFLSN-------GSLGDWIHGERKNELDITSALDYLHNDCEVP 762
+ L + N + LV++++ ++ + +H + + + YLH+
Sbjct: 76 --NVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYV-VYQLIKVIKYLHSGG--- 129
Query: 763 VVHSDLKPGNILLDEEMTAKVGDFGLARFLL-----------------ERVDNQSSISST 805
++H D+KP NILL+ E KV DFGL+R + E D+ I +
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 806 HVFMGSIGYVPPEYGLGERPSTAG 829
+V + Y PE LG T G
Sbjct: 190 YV--ATRWYRAPEILLGSTKYTKG 211
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 43.1 bits (100), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 33/127 (25%)
Query: 689 FIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD 747
I+E E ++ + +H+N++ L+ +C+ D L ++ E+ S G+L +++ R L+
Sbjct: 65 LISEMEMMKMIGKHKNIINLLGACTQ-DGP----LYVIVEYASKGNLREYLQARRPPGLE 119
Query: 748 ------------------------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKV 783
+ ++YL + +H DL N+L+ E+ K+
Sbjct: 120 YCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKI 176
Query: 784 GDFGLAR 790
DFGLAR
Sbjct: 177 ADFGLAR 183
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 722 LALVYEFLSNGSLGDWIHGERKNELDITS-------ALDYLHNDCEVPVVHSDLKPGNIL 774
L +V E+L+ GSL D + +E I + AL++LH++ V+H D+K NIL
Sbjct: 92 LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNIL 148
Query: 775 LDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYG 820
L + + K+ DFG + +S + T +M YG
Sbjct: 149 LGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYG 194
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 42.7 bits (99), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 33/127 (25%)
Query: 689 FIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD 747
I+E E ++ + +H+N++ L+ +C+ D L ++ E+ S G+L +++ R L+
Sbjct: 72 LISEMEMMKMIGKHKNIINLLGACTQ-DGP----LYVIVEYASKGNLREYLQARRPPGLE 126
Query: 748 ------------------------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKV 783
+ ++YL + +H DL N+L+ E+ K+
Sbjct: 127 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKI 183
Query: 784 GDFGLAR 790
DFGLAR
Sbjct: 184 ADFGLAR 190
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 722 LALVYEFLSNGSLGDWIHGERKNELDITS-------ALDYLHNDCEVPVVHSDLKPGNIL 774
L +V E+L+ GSL D + +E I + AL++LH++ V+H D+K NIL
Sbjct: 93 LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNIL 149
Query: 775 LDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYG 820
L + + K+ DFG + +S + T +M YG
Sbjct: 150 LGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYG 195
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 42.7 bits (99), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 33/127 (25%)
Query: 689 FIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD 747
I+E E ++ + +H+N++ L+ +C+ D L ++ E+ S G+L +++ R L+
Sbjct: 69 LISEMEMMKMIGKHKNIINLLGACTQ-DGP----LYVIVEYASKGNLREYLQARRPPGLE 123
Query: 748 ------------------------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKV 783
+ ++YL + +H DL N+L+ E+ K+
Sbjct: 124 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKI 180
Query: 784 GDFGLAR 790
DFGLAR
Sbjct: 181 ADFGLAR 187
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 25/155 (16%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
+ F+ E T+R H ++VKLI + ++N + ++ E + G L ++ RK L
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLI----GVITENP--VWIIMELCTLGELRSFLQV-RKFSL 108
Query: 747 DITS----------ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796
D+ S AL YL + VH D+ N+L+ K+GDFGL+R++ +
Sbjct: 109 DLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDST 165
Query: 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
++S I ++ PE R ++A DV
Sbjct: 166 YYKASKGKL-----PIKWMAPESINFRRFTSASDV 195
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 42.7 bits (99), Expect = 9e-04, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 722 LALVYEFLSNGSLGDWIHGERKNELDITS-------ALDYLHNDCEVPVVHSDLKPGNIL 774
L ++ E+L GS D + +E I + LDYLH++ ++ H D+K N+L
Sbjct: 80 LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI---HRDIKAANVL 136
Query: 775 LDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L E K+ DFG+A L D Q + F+G+ ++ PE
Sbjct: 137 LSEHGEVKLADFGVAGQL---TDTQ---IKRNTFVGTPFWMAPE 174
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 31/146 (21%)
Query: 669 IGSGSFGSVLHNERTGSWKSFIA----------------ECETLRNVRHRNLVKLITSCS 712
+GSG+FG V + + F+A E + + H L+ L +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 713 SLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCE-------VPVVH 765
D M L+ EFLS G L D I E ++ ++Y+ CE +VH
Sbjct: 119 --DKYEM---VLILEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHSIVH 172
Query: 766 SDLKPGNILLDEEMTA--KVGDFGLA 789
D+KP NI+ + + + K+ DFGLA
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLA 198
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 136/304 (44%), Gaps = 44/304 (14%)
Query: 94 LSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMAN 153
L+ L I NN+L+ P + NL +L ++I NN Q ++ LT L L L N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKL--VDILMNNNQIADITPLANLTNLTGLTLFNN 117
Query: 154 KITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLA 213
+IT D L+NL +L L N +I+++ S LS L +L+ L + N++
Sbjct: 118 QITDI---DPLKNLTNLNRLELSSN--------TISDI--SALSGLTSLQQLSFSSNQVT 164
Query: 214 GTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLT 273
P + N+T+L L ++SN++ V L NL I N+ + P L LT
Sbjct: 165 DLKP--LANLTTLERLDISSNKVSD---ISVLAKLTNLESLIATNNQISDITP--LGILT 217
Query: 274 NIQIIRMTHNLLE--GTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLN 331
N+ + + N L+ GT L +L L ++ N+I + GL T L
Sbjct: 218 NLDELSLNGNQLKDIGT----LASLTNLTDLDLANNQISNLAPLSGL---------TKLT 264
Query: 332 YLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISG 391
L L NQ P + + L+ L L N + P I L++LT L L +N+IS
Sbjct: 265 ELKLGANQISNISP--LAGLT-ALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISD 319
Query: 392 EIPI 395
P+
Sbjct: 320 ISPV 323
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 119/269 (44%), Gaps = 41/269 (15%)
Query: 91 IGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDL 150
+ NL+ L ++L +N +S + L L+ L+ S N + P ++ LT L+ LD+
Sbjct: 125 LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDI 180
Query: 151 MANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTIN 210
+NK++ +L NL SL N I+++ P L L NL L L N
Sbjct: 181 SSNKVSDISVLAKLTNLESLIATN-----------NQISDITP--LGILTNLDELSLNGN 227
Query: 211 RLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLH 270
+L T+ ++T+L L LA+NQ+ P L L + N+ + P L
Sbjct: 228 QLKDI--GTLASLTNLTDLDLANNQISNLAPL---SGLTKLTELKLGANQISNISP--LA 280
Query: 271 NLTNIQIIRMTHNLLEGTLP-PGLGNLPFLRTYNIGFNKI-----VSS--------GDDE 316
LT + + + N LE P L NL +L Y FN I VSS +
Sbjct: 281 GLTALTNLELNENQLEDISPISNLKNLTYLTLY---FNNISDISPVSSLTKLQRLFFSNN 337
Query: 317 GLSFITSLTNSTHLNYLALDGNQFEGKIP 345
+S ++SL N T++N+L+ NQ P
Sbjct: 338 KVSDVSSLANLTNINWLSAGHNQISDLTP 366
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 161/383 (42%), Gaps = 48/383 (12%)
Query: 194 SDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLD 253
+DL ++ L+ L I + G + + +L + ++NQL P L L+D
Sbjct: 38 TDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITPLK---NLTKLVD 89
Query: 254 FIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSG 313
+ N+ P L NLTN+ + + +N + P L NL L + N I
Sbjct: 90 ILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTI---- 141
Query: 314 DDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASI 373
S I++L+ T L L+ NQ P + N + L +L + N + + +
Sbjct: 142 -----SDISALSGLTSLQQLSFSSNQVTDLKP--LANLT-TLERLDISSNKVSDI--SVL 191
Query: 374 GRLRSLTLLDLSYNSISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLS 433
+L +L L + N IS P+ I + G +LA+L L +DL+
Sbjct: 192 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG----TLASLTNLTDLDLA 247
Query: 434 GNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSL 493
N+++ P+S L + L N+I+ + PL + L + ++L++N L
Sbjct: 248 NNQISNLAPLS--GLTKLTELKLGANQISN------ISPL----AGLTALTNLELNENQL 295
Query: 494 SGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQ 553
P + N K+L L + +N S P V+ L L+ L S+NK+S S L NL
Sbjct: 296 EDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNKVSDV--SSLANLT 349
Query: 554 ALRSLNLTFNNLEGVVPSEGIFR 576
+ L+ N + + P + R
Sbjct: 350 NINWLSAGHNQISDLTPLANLTR 372
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 39/166 (23%)
Query: 669 IGSGSFGSV------------------LHNERTGSW--KSFIAECETLRNVRHRNLVKLI 708
+GSG+FG+V L NE +AE ++ + + +V++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER----KNELD----ITSALDYLHNDCE 760
C + E LV E G L ++ R KN ++ ++ + YL E
Sbjct: 79 GICEA------ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---E 129
Query: 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
VH DL N+LL + AK+ DFGL++ L R D + TH
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENXYKAQTH 173
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F IG+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ KV DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F IG+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ KV DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 136/304 (44%), Gaps = 44/304 (14%)
Query: 94 LSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMAN 153
L+ L I NN+L+ P + NL +L ++I NN Q ++ LT L L L N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKL--VDILMNNNQIADITPLANLTNLTGLTLFNN 117
Query: 154 KITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLA 213
+IT D L+NL +L L N +I+++ S LS L +L+ L + N++
Sbjct: 118 QITDI---DPLKNLTNLNRLELSSN--------TISDI--SALSGLTSLQQLSFSSNQVT 164
Query: 214 GTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLT 273
P + N+T+L L ++SN++ V L NL I N+ + P L LT
Sbjct: 165 DLKP--LANLTTLERLDISSNKVSD---ISVLAKLTNLESLIATNNQISDITP--LGILT 217
Query: 274 NIQIIRMTHNLLE--GTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLN 331
N+ + + N L+ GT L +L L ++ N+I + GL T L
Sbjct: 218 NLDELSLNGNQLKDIGT----LASLTNLTDLDLANNQISNLAPLSGL---------TKLT 264
Query: 332 YLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISG 391
L L NQ P + + L+ L L N + P I L++LT L L +N+IS
Sbjct: 265 ELKLGANQISNISP--LAGLT-ALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISD 319
Query: 392 EIPI 395
P+
Sbjct: 320 ISPV 323
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 119/269 (44%), Gaps = 41/269 (15%)
Query: 91 IGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDL 150
+ NL+ L ++L +N +S + L L+ L+ S N + P ++ LT L+ LD+
Sbjct: 125 LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDI 180
Query: 151 MANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTIN 210
+NK++ +L NL SL N I+++ P L L NL L L N
Sbjct: 181 SSNKVSDISVLAKLTNLESLIATN-----------NQISDITP--LGILTNLDELSLNGN 227
Query: 211 RLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLH 270
+L T+ ++T+L L LA+NQ+ P L L + N+ + P L
Sbjct: 228 QLKDI--GTLASLTNLTDLDLANNQISNLAPL---SGLTKLTELKLGANQISNISP--LA 280
Query: 271 NLTNIQIIRMTHNLLEGTLP-PGLGNLPFLRTYNIGFNKI-----VSSGD--------DE 316
LT + + + N LE P L NL +L Y FN I VSS +
Sbjct: 281 GLTALTNLELNENQLEDISPISNLKNLTYLTLY---FNNISDISPVSSLTKLQRLFFYNN 337
Query: 317 GLSFITSLTNSTHLNYLALDGNQFEGKIP 345
+S ++SL N T++N+L+ NQ P
Sbjct: 338 KVSDVSSLANLTNINWLSAGHNQISDLTP 366
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 160/383 (41%), Gaps = 48/383 (12%)
Query: 194 SDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLD 253
+DL ++ L+ L I + G + + +L + ++NQL P L L+D
Sbjct: 38 TDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITPLK---NLTKLVD 89
Query: 254 FIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSG 313
+ N+ P L NLTN+ + + +N + P L NL L + N I
Sbjct: 90 ILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTI---- 141
Query: 314 DDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASI 373
S I++L+ T L L+ NQ P + N + L +L + N + + +
Sbjct: 142 -----SDISALSGLTSLQQLSFSSNQVTDLKP--LANLT-TLERLDISSNKVSDI--SVL 191
Query: 374 GRLRSLTLLDLSYNSISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLS 433
+L +L L + N IS P+ I + G +LA+L L +DL+
Sbjct: 192 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG----TLASLTNLTDLDLA 247
Query: 434 GNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSL 493
N+++ P+S L + L N+I+ + PL + L + ++L++N L
Sbjct: 248 NNQISNLAPLS--GLTKLTELKLGANQISN------ISPL----AGLTALTNLELNENQL 295
Query: 494 SGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQ 553
P + N K+L L + +N S P V+ L L+ L +NK+S S L NL
Sbjct: 296 EDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLT 349
Query: 554 ALRSLNLTFNNLEGVVPSEGIFR 576
+ L+ N + + P + R
Sbjct: 350 NINWLSAGHNQISDLTPLANLTR 372
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 28/149 (18%)
Query: 667 NLIGSGSFGSVLHN------------------ERTGSWKSFIAECETLRNVRHRNLVKLI 708
+LIG+GS+G V E K + E L + H ++VK++
Sbjct: 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVL 118
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSAL-------DYLHNDCEV 761
D + + L +V E + + EL I + L Y+H+
Sbjct: 119 DIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHS---A 175
Query: 762 PVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
++H DLKP N L++++ + KV DFGLAR
Sbjct: 176 GILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 31/146 (21%)
Query: 669 IGSGSFGSV-----------------LHNERTGSWKSFIAECETLRNVRHRNLVKLITSC 711
+G G++G V L E G + I E L+ + H N+V LI
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 712 SSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHN------DC-EVPVV 764
S L LV+EF+ + E K L + YL+ C + ++
Sbjct: 89 HS-----ERCLTLVFEFMEKDLKK--VLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRIL 141
Query: 765 HSDLKPGNILLDEEMTAKVGDFGLAR 790
H DLKP N+L++ + K+ DFGLAR
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 90/224 (40%), Gaps = 38/224 (16%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 51 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFD 110
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 111 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWS---- 159
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPT----------------SESF 837
V SS +T G++ Y+PPE G D+ + + ++
Sbjct: 160 --VHAPSSRRTT--LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTY 215
Query: 838 AGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCL 881
+ + VE P+ V + + +L+ N SQ + L + L
Sbjct: 216 QETYRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVL 259
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 722 LALVYEFLSNGSLGDWIHGERKNELDITS-------ALDYLHNDCEVPVVHSDLKPGNIL 774
L ++ E+L GS D + +E I + LDYLH++ ++ H D+K N+L
Sbjct: 80 LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI---HRDIKAANVL 136
Query: 775 LDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L E K+ DFG+A L D Q + F+G+ ++ PE
Sbjct: 137 LSEHGEVKLADFGVAGQL---TDTQ---IKRNXFVGTPFWMAPE 174
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 31/146 (21%)
Query: 669 IGSGSFGSV-----------------LHNERTGSWKSFIAECETLRNVRHRNLVKLITSC 711
+G G++G V L E G + I E L+ + H N+V LI
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 712 SSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHN------DC-EVPVV 764
S L LV+EF+ + E K L + YL+ C + ++
Sbjct: 89 HS-----ERCLTLVFEFMEKDLKK--VLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRIL 141
Query: 765 HSDLKPGNILLDEEMTAKVGDFGLAR 790
H DLKP N+L++ + K+ DFGLAR
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 94/238 (39%), Gaps = 66/238 (27%)
Query: 652 SYDELRRATGNFSHE---------NLIGSGSFGSVL----------------------HN 680
+Y++ RA F+ E +IG+G FG V +
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG 740
E+ + F+ E + H N+V L + + +V EF+ NG+L ++
Sbjct: 85 EKQR--RDFLCEASIMGQFDHPNVVHLEGVVTRGKP-----VMIVIEFMENGALDAFL-- 135
Query: 741 ERKNE------------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788
RK++ I + + YL ++ VH DL NIL++ + KV DFGL
Sbjct: 136 -RKHDGQFTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGL 191
Query: 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
+R + D+ ++ +T + + PE + ++A DV + + IV W
Sbjct: 192 SRVI---EDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWS-------YGIVMW 239
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 720 EFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCEVP-------VVHSDLKPGN 772
+++ +V E N L W+ ++K +D Y N E +VHSDLKP N
Sbjct: 85 QYIYMVME-CGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 141
Query: 773 ILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L+ + M K+ DFG+A + + D S + + V G++ Y+PPE
Sbjct: 142 FLIVDGML-KLIDFGIANQM--QPDTTSVVKDSQV--GTVNYMPPE 182
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 722 LALVYEFLSNGSLGDWIHGERKNELDITS-------ALDYLHNDCEVPVVHSDLKPGNIL 774
L ++ E+L GS D + +E I + LDYLH++ ++ H D+K N+L
Sbjct: 95 LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI---HRDIKAANVL 151
Query: 775 LDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L E K+ DFG+A L D Q + F+G+ ++ PE
Sbjct: 152 LSEHGEVKLADFGVAGQL---TDTQ---IKRNXFVGTPFWMAPE 189
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F IG+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ KV DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 14/103 (13%)
Query: 719 MEFLALVYEFLS---NGSLGDWIHGERKNELDITSALDYLHNDCEVPVVHSDLKPGNILL 775
ME + E L G + + I G K + I AL YL + V+H D+KP NILL
Sbjct: 103 MELMGTCAEKLKKRMQGPIPERILG--KMTVAIVKALYYLKE--KHGVIHRDVKPSNILL 158
Query: 776 DEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
DE K+ DFG++ L VD+++ S G Y+ PE
Sbjct: 159 DERGQIKLCDFGISGRL---VDDKAKDRSA----GCAAYMAPE 194
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 29 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 88
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+++ G + + R I +YLH+
Sbjct: 89 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 146
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+DE+ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 147 -LDLIYRDLKPENLLIDEQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 196
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 197 ILSKGYNKAVD 207
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 33/128 (25%)
Query: 688 SFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
I+E E ++ + +H+N++ L+ +C+ L ++ E+ S G+L +++ R L
Sbjct: 120 DLISEMEMMKMIGKHKNIINLLGACTQDGP-----LYVIVEYASKGNLREYLQARRPPGL 174
Query: 747 D------------------------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAK 782
+ + ++YL + +H DL N+L+ E+ K
Sbjct: 175 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMK 231
Query: 783 VGDFGLAR 790
+ DFGLAR
Sbjct: 232 IADFGLAR 239
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 720 EFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCEVP-------VVHSDLKPGN 772
+++ +V E N L W+ ++K +D Y N E +VHSDLKP N
Sbjct: 81 QYIYMVME-CGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 137
Query: 773 ILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L+ + M K+ DFG+A + + D S + + V G++ Y+PPE
Sbjct: 138 FLIVDGML-KLIDFGIANQM--QPDTTSVVKDSQV--GTVNYMPPE 178
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 39/166 (23%)
Query: 669 IGSGSFGSV------------------LHNERTGSW--KSFIAECETLRNVRHRNLVKLI 708
+GSG+FG+V L NE +AE ++ + + +V++I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER----KNELD----ITSALDYLHNDCE 760
C + E LV E G L ++ R KN ++ ++ + YL E
Sbjct: 73 GICEA------ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---E 123
Query: 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
VH DL N+LL + AK+ DFGL++ L R D + TH
Sbjct: 124 SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTH 167
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 39/166 (23%)
Query: 669 IGSGSFGSV------------------LHNERTGSW--KSFIAECETLRNVRHRNLVKLI 708
+GSG+FG+V L NE +AE ++ + + +V++I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER----KNELD----ITSALDYLHNDCE 760
C + E LV E G L ++ R KN ++ ++ + YL E
Sbjct: 85 GICEA------ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---E 135
Query: 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
VH DL N+LL + AK+ DFGL++ L R D + TH
Sbjct: 136 SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTH 179
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 39/166 (23%)
Query: 669 IGSGSFGSV------------------LHNERTGSW--KSFIAECETLRNVRHRNLVKLI 708
+GSG+FG+V L NE +AE ++ + + +V++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER----KNELD----ITSALDYLHNDCE 760
C + E LV E G L ++ R KN ++ ++ + YL E
Sbjct: 95 GICEA------ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---E 145
Query: 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
VH DL N+LL + AK+ DFGL++ L R D + TH
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTH 189
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 39/166 (23%)
Query: 669 IGSGSFGSV------------------LHNERTGSW--KSFIAECETLRNVRHRNLVKLI 708
+GSG+FG+V L NE +AE ++ + + +V++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER----KNELD----ITSALDYLHNDCE 760
C + E LV E G L ++ R KN ++ ++ + YL E
Sbjct: 95 GICEA------ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---E 145
Query: 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
VH DL N+LL + AK+ DFGL++ L R D + TH
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTH 189
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 39/166 (23%)
Query: 669 IGSGSFGSV------------------LHNERTGSW--KSFIAECETLRNVRHRNLVKLI 708
+GSG+FG+V L NE +AE ++ + + +V++I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER----KNELD----ITSALDYLHNDCE 760
C + E LV E G L ++ R KN ++ ++ + YL E
Sbjct: 75 GICEA------ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---E 125
Query: 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
VH DL N+LL + AK+ DFGL++ L R D + TH
Sbjct: 126 SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTH 169
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 39/166 (23%)
Query: 669 IGSGSFGSV------------------LHNERTGSW--KSFIAECETLRNVRHRNLVKLI 708
+GSG+FG+V L NE +AE ++ + + +V++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER----KNELD----ITSALDYLHNDCE 760
C + E LV E G L ++ R KN ++ ++ + YL E
Sbjct: 79 GICEA------ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---E 129
Query: 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
VH DL N+LL + AK+ DFGL++ L R D + TH
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTH 173
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 720 EFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCEVP-------VVHSDLKPGN 772
+++ +V E N L W+ ++K +D Y N E +VHSDLKP N
Sbjct: 82 QYIYMVME-CGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 138
Query: 773 ILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L+ + M K+ DFG+A + + D S + + V G++ Y+PPE
Sbjct: 139 FLIVDGML-KLIDFGIANQM--QPDTTSVVKDSQV--GTVNYMPPE 179
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 39/166 (23%)
Query: 669 IGSGSFGSV------------------LHNERTGSW--KSFIAECETLRNVRHRNLVKLI 708
+GSG+FG+V L NE +AE ++ + + +V++I
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER----KNELD----ITSALDYLHNDCE 760
C + E LV E G L ++ R KN ++ ++ + YL E
Sbjct: 93 GICEA------ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---E 143
Query: 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
VH DL N+LL + AK+ DFGL++ L R D + TH
Sbjct: 144 SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTH 187
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 121/340 (35%), Gaps = 67/340 (19%)
Query: 623 LIVWPIIVRKRKAKRVGVSALFKVCHPKISY-------DELRRATGNFSHENLIGSGSFG 675
+I+ + RKR R+G L+ +P+ DE A + +G GSFG
Sbjct: 2 VIMLYVFHRKRNNSRLGNGVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFG 61
Query: 676 SVLHNERTGSWKSFIAECETLRNVR-------HRNLVKLITSCSSLDSKNMEFLA----- 723
V G K E ET ++ R ++ + S + N +
Sbjct: 62 MVYEGVAKGVVKD---EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGV 118
Query: 724 --------LVYEFLSNGSLGDWIHGER------------------KNELDITSALDYLHN 757
++ E ++ G L ++ R + +I + YL+
Sbjct: 119 VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA 178
Query: 758 DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPP 817
+ VH DL N ++ E+ T K+GDFG+ R + E + + G G +P
Sbjct: 179 N---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE---------TDYYRKGGKGLLPV 226
Query: 818 EYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE--LRQLMTSNESQTI 875
+ E S V T+ S F +V W + L E Q L E LR +M E +
Sbjct: 227 RWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM---EGGLL 281
Query: 876 QLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQE 915
D ++ + C +P R E + +K E
Sbjct: 282 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 321
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 34/186 (18%)
Query: 657 RRATGNFSHENLIGSGSFGSVLHNERTGSWKSFI--------------AECETLRNVRHR 702
R +F+ ++G GSFG V+ +R G+ + + EC T+ R
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVEC-TMVEKRVL 73
Query: 703 NLVKLITSCSSLDS--KNMEFLALVYEFLSNGSLGDWIH--GERKN------ELDITSAL 752
L+ + L S + ++ L V E+++ G L I G+ K +I+ L
Sbjct: 74 ALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGL 133
Query: 753 DYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSI 812
+LH +++ DLK N++LD E K+ DFG+ + ++ +T F G+
Sbjct: 134 FFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK------EHMMDGVTTREFCGTP 184
Query: 813 GYVPPE 818
Y+ PE
Sbjct: 185 DYIAPE 190
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 74/195 (37%), Gaps = 38/195 (19%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIA-------------------ECETLRNVRHR 702
F ++G G FG V + + K + E + L V R
Sbjct: 185 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR 244
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDC--- 759
+V L + + D+ L LV ++ G L I+ + A+ Y C
Sbjct: 245 FVVSLAYAYETKDA-----LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGL 299
Query: 760 ----EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYV 815
+V+ DLKP NILLD+ ++ D GLA + E + + G++GY+
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV-------GTVGYM 352
Query: 816 PPEYGLGERPSTAGD 830
PE ER + + D
Sbjct: 353 APEVVKNERYTFSPD 367
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 77/198 (38%), Gaps = 44/198 (22%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIA-------------------ECETLRNVRHR 702
F ++G G FG V + + K + E + L V R
Sbjct: 185 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR 244
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL----------DITSAL 752
+V L + + D+ L LV ++ G L I+ + +I L
Sbjct: 245 FVVSLAYAYETKDA-----LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGL 299
Query: 753 DYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSI 812
+ LH + +V+ DLKP NILLD+ ++ D GLA + E + + G++
Sbjct: 300 EDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV-------GTV 349
Query: 813 GYVPPEYGLGERPSTAGD 830
GY+ PE ER + + D
Sbjct: 350 GYMAPEVVKNERYTFSPD 367
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 413 IPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNF--QSLLSIDLSNNRI--------- 461
+P G+ + L L KL+ LS N L+ + S +F SL +DLS N +
Sbjct: 43 LPHGVFDKLTQLTKLS---LSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLG 99
Query: 462 -----NGNIPKGILRPLPE--EISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAY 514
+ + L+ + E L N++ +D+S SLE L MA
Sbjct: 100 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAG 159
Query: 515 NQFS-GPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNL 565
N F +P+I EL+ L LDLS +L P+ +L +L+ LN++ NN
Sbjct: 160 NSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 211
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 96/247 (38%), Gaps = 11/247 (4%)
Query: 333 LALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRL--RSLTLLDLSYNSIS 390
L L+ N+ + +P + + +L+KL L N + K S SL LDLS+N +
Sbjct: 33 LELESNKLQS-LPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI 91
Query: 391 GEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQS 450
+ N + +L+ L +D+S F S
Sbjct: 92 TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSS 151
Query: 451 LLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEEL 510
L + ++ N N LP+ + L N+ +DLS L P + + SL+ L
Sbjct: 152 LEVLKMAGNSFQENF-------LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 204
Query: 511 LMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNL-QALRSLNLTFNNLEGVV 569
M++N F L L+VLD S N + S +LQ+ +L LNLT N+
Sbjct: 205 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264
Query: 570 PSEGIFR 576
+ +
Sbjct: 265 EHQSFLQ 271
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 87 ISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELK 146
I + NL+FL Q Q +LS P +L L+VLN+S NN L L+
Sbjct: 170 IFTELRNLTFLDLSQCQLEQLS---PTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 226
Query: 147 MLDLMANKITGRVTDDQLRNLRSLQVLNFGKN 178
+LD N I + SL LN +N
Sbjct: 227 VLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN 258
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 25/155 (16%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
+ F+ E T+R H ++VKLI + ++N + ++ E + G L ++ RK L
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLI----GVITENP--VWIIMELCTLGELRSFLQV-RKFSL 488
Query: 747 DITS----------ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796
D+ S AL YL + VH D+ N+L+ K+GDFGL+R++ +
Sbjct: 489 DLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDST 545
Query: 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
++S I ++ PE R ++A DV
Sbjct: 546 YYKASKGKL-----PIKWMAPESINFRRFTSASDV 575
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 750 SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
L+YLH ++H DLKP N+LLDE K+ DFGLA+
Sbjct: 123 QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 19/135 (14%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSL-GDWIHGERKNELD--- 747
E R ++H N+V+L S S L+++ ++ G L D + E +E D
Sbjct: 60 EARICRLLKHPNIVRLHDSISEEGHHY-----LIFDLVTGGELFEDIVAREYYSEADASH 114
Query: 748 -ITSALDYLHNDCEVPVVHSDLKPGNILLDEEM---TAKVGDFGLARFLLERVDNQSSIS 803
I L+ + + ++ VVH +LKP N+LL ++ K+ DFGLA ++ +
Sbjct: 115 CIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA------IEVEGEQQ 168
Query: 804 STHVFMGSIGYVPPE 818
+ F G+ GY+ PE
Sbjct: 169 AWFGFAGTPGYLSPE 183
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 720 EFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCEVP-------VVHSDLKPGN 772
+++ +V E N L W+ ++K +D Y N E +VHSDLKP N
Sbjct: 101 QYIYMVME-CGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 157
Query: 773 ILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L+ + M K+ DFG+A + + D S + + V G++ Y+PPE
Sbjct: 158 FLIVDGM-LKLIDFGIANQM--QPDTTSVVKDSQV--GTVNYMPPE 198
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 25/155 (16%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
+ F+ E T+R H ++VKLI + ++N + ++ E + G L ++ RK L
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLI----GVITENP--VWIIMELCTLGELRSFLQV-RKFSL 488
Query: 747 DITS----------ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796
D+ S AL YL + VH D+ N+L+ K+GDFGL+R++ +
Sbjct: 489 DLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545
Query: 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
++S I ++ PE R ++A DV
Sbjct: 546 YYKASKGKL-----PIKWMAPESINFRRFTSASDV 575
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 89/224 (39%), Gaps = 38/224 (16%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 51 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFD 110
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 111 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWS---- 159
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPT----------------SESF 837
V SS T G++ Y+PPE G D+ + + ++
Sbjct: 160 --VHAPSSRRDT--LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTY 215
Query: 838 AGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCL 881
+ + VE P+ V + + +L+ N SQ + L + L
Sbjct: 216 QETYRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVL 259
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 33/128 (25%)
Query: 688 SFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
I+E E ++ + +H+N++ L+ +C+ L ++ E+ S G+L +++ R L
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGP-----LYVIVEYASKGNLREYLQARRPPGL 133
Query: 747 D------------------------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAK 782
+ + ++YL + +H DL N+L+ E+ K
Sbjct: 134 EFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMK 190
Query: 783 VGDFGLAR 790
+ DFGLAR
Sbjct: 191 IADFGLAR 198
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 188 IANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYN-MTSLVHLRLASNQLGGEIPYDVRD 246
I L P L NLK L L N+L G +P +++ +T L L L +NQL +P V D
Sbjct: 52 ITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQL-TVLPSAVFD 109
Query: 247 TLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPG 292
L +L + C N+ T ++P + LT++ + + N L+ ++P G
Sbjct: 110 RLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIPHG 153
Score = 33.9 bits (76), Expect = 0.45, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 16/138 (11%)
Query: 100 IQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNI-SKLTELKMLDLMANKIT-- 156
+ L +N+++ P +L L+ L + N L G LPV + LT+L +LDL N++T
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVL 103
Query: 157 GRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTV 216
D+L +L+ L + N L +P + RL +L L L N+L
Sbjct: 104 PSAVFDRLVHLKELFMCC---NKL---------TELPRGIERLTHLTHLALDQNQLKSIP 151
Query: 217 PSTIYNMTSLVHLRLASN 234
++SL H L N
Sbjct: 152 HGAFDRLSSLTHAYLFGN 169
Score = 33.5 bits (75), Expect = 0.63, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 53/135 (39%), Gaps = 28/135 (20%)
Query: 482 NVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKL 541
N + L DN ++ P + +L+EL + NQ + L L VLDL +N+L
Sbjct: 41 NAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQL 100
Query: 542 S-----------------------GSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNM 578
+ +P ++ L L L L N L+ + G F +
Sbjct: 101 TVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSI--PHGAFDRL 158
Query: 579 SNV---HLKGNPKLC 590
S++ +L GNP C
Sbjct: 159 SSLTHAYLFGNPWDC 173
Score = 30.8 bits (68), Expect = 3.8, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 29/142 (20%)
Query: 328 THLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASI-GRLRSLTLLDLSY 386
T+ L L NQ P + N L +LYLG N + G +P + L LT+LDL
Sbjct: 40 TNAQILYLHDNQITKLEPGVFDSLIN-LKELYLGSNQL-GALPVGVFDSLTQLTVLDLGT 97
Query: 387 NSISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFG 446
N ++ +P + + L +LK+L + N+LT E+P
Sbjct: 98 NQLT---------------------VLPSAVFDRLVHLKELF---MCCNKLT-ELPRGIE 132
Query: 447 NFQSLLSIDLSNNRINGNIPKG 468
L + L N++ +IP G
Sbjct: 133 RLTHLTHLALDQNQLK-SIPHG 153
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 134/306 (43%), Gaps = 56/306 (18%)
Query: 94 LSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMAN 153
L+ L I NN+L+ P + NL +L ++I NN Q ++ LT L L L N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKL--VDILMNNNQIADITPLANLTNLTGLTLFNN 117
Query: 154 KIT------------------GRVTD-DQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPS 194
+IT ++D L L SLQ LNFG + +L P
Sbjct: 118 QITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGN---------QVTDLKP- 167
Query: 195 DLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDF 254
L+ L L+ LD++ N+++ S + +T+L L +NQ+ P + L NL +
Sbjct: 168 -LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGI---LTNLDEL 221
Query: 255 IYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGD 314
N+ K G+L +LTN+ + + +N + P L L L +G N+I
Sbjct: 222 SLNGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQI----- 272
Query: 315 DEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIP-ASI 373
S I+ L T L L L+ NQ E P I N N L+ L L N+I P +S+
Sbjct: 273 ----SNISPLAGLTALTNLELNENQLEDISP--ISNLKN-LTYLTLYFNNISDISPVSSL 325
Query: 374 GRLRSL 379
+L+ L
Sbjct: 326 TKLQRL 331
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 162/383 (42%), Gaps = 49/383 (12%)
Query: 194 SDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLD 253
+DL ++ L+ L I + G + + +L + ++NQL P L L+D
Sbjct: 38 TDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITPLK---NLTKLVD 89
Query: 254 FIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSG 313
+ N+ P L NLTN+ + + +N + P L NL L + N I
Sbjct: 90 ILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTI---S 142
Query: 314 DDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASI 373
D LS +TSL LN+ GNQ P + N + L +L + N + + +
Sbjct: 143 DISALSGLTSLQ---QLNF----GNQVTDLKP--LANLT-TLERLDISSNKVSDI--SVL 190
Query: 374 GRLRSLTLLDLSYNSISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLS 433
+L +L L + N IS P+ I + G +LA+L L +DL+
Sbjct: 191 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG----TLASLTNLTDLDLA 246
Query: 434 GNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSL 493
N+++ P+S L + L N+I+ + PL + L + ++L++N L
Sbjct: 247 NNQISNLAPLS--GLTKLTELKLGANQISN------ISPL----AGLTALTNLELNENQL 294
Query: 494 SGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQ 553
P + N K+L L + +N S P V+ L L+ L S+NK+S S L NL
Sbjct: 295 EDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNKVSDV--SSLANLT 348
Query: 554 ALRSLNLTFNNLEGVVPSEGIFR 576
+ L+ N + + P + R
Sbjct: 349 NINWLSAGHNQISDLTPLANLTR 371
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 119/269 (44%), Gaps = 42/269 (15%)
Query: 91 IGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDL 150
+ NL+ L ++L +N +S + L L+ LN F N +L ++ LT L+ LD+
Sbjct: 125 LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLN--FGNQVTDLKP-LANLTTLERLDI 179
Query: 151 MANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTIN 210
+NK++ +L NL SL N I+++ P L L NL L L N
Sbjct: 180 SSNKVSDISVLAKLTNLESLIATN-----------NQISDITP--LGILTNLDELSLNGN 226
Query: 211 RLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLH 270
+L T+ ++T+L L LA+NQ+ P L L + N+ + P L
Sbjct: 227 QLKDI--GTLASLTNLTDLDLANNQISNLAPL---SGLTKLTELKLGANQISNISP--LA 279
Query: 271 NLTNIQIIRMTHNLLEGTLP-PGLGNLPFLRTYNIGFNKI-----VSS--------GDDE 316
LT + + + N LE P L NL +L Y FN I VSS +
Sbjct: 280 GLTALTNLELNENQLEDISPISNLKNLTYLTLY---FNNISDISPVSSLTKLQRLFFSNN 336
Query: 317 GLSFITSLTNSTHLNYLALDGNQFEGKIP 345
+S ++SL N T++N+L+ NQ P
Sbjct: 337 KVSDVSSLANLTNINWLSAGHNQISDLTP 365
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 34/179 (18%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+++ G + + R I +YLH+
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 180
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
+ +++ DLKP N+L+D++ +V DFG A+ RV +T G+ Y+ PE
Sbjct: 181 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVK-----GATWTLCGTPEYLAPE 229
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Query: 722 LALVYEFLSNGSLGDWIHGERKNELDITS-------ALDYLHNDCEVPVVHSDLKPGNIL 774
L +V E+L+ GSL D + +E I + AL++LH++ V+H ++K NIL
Sbjct: 93 LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRNIKSDNIL 149
Query: 775 LDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYG 820
L + + K+ DFG + +S++ T +M YG
Sbjct: 150 LGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 195
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 33/128 (25%)
Query: 688 SFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
I+E E ++ + +H+N++ L+ +C+ L ++ E+ S G+L +++ R L
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGP-----LYVIVEYASKGNLREYLQARRPPGL 133
Query: 747 D------------------------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAK 782
+ + ++YL + +H DL N+L+ E+ K
Sbjct: 134 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMK 190
Query: 783 VGDFGLAR 790
+ DFGLAR
Sbjct: 191 IADFGLAR 198
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 34/148 (22%)
Query: 669 IGSGSFGSV------------------LHNERTGSWKSFIAECETLRNVRHRNLVKLITS 710
IG G++G+V L ++ G S + E L+ ++H+N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 711 CSSLDSKNMEFLALVYEFLSNG--SLGDWIHGERKNEL------DITSALDYLHNDCEVP 762
S D K L LV+EF D +G+ E+ + L + H+
Sbjct: 70 LHS-DKK----LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 763 VVHSDLKPGNILLDEEMTAKVGDFGLAR 790
V+H DLKP N+L++ K+ +FGLAR
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 33/128 (25%)
Query: 688 SFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
I+E E ++ + +H+N++ L+ +C+ L ++ E+ S G+L +++ R L
Sbjct: 72 DLISEMEMMKMIGKHKNIINLLGACTQDGP-----LYVIVEYASKGNLREYLQARRPPGL 126
Query: 747 D------------------------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAK 782
+ + ++YL + +H DL N+L+ E+ K
Sbjct: 127 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMK 183
Query: 783 VGDFGLAR 790
+ DFGLAR
Sbjct: 184 IADFGLAR 191
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 480 LENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFS-GPIPNIVAELKGLEVLDLSS 538
L N++ +D+S SLE L MA N F +P+I EL+ L LDLS
Sbjct: 444 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 503
Query: 539 NKLSGSIPSDLQNLQALRSLNLTFNNL 565
+L P+ +L +L+ LN++ NN
Sbjct: 504 CQLEQLSPTAFNSLSSLQVLNMSHNNF 530
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 31/165 (18%)
Query: 412 EIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILR 471
+IP +P S NL DLS N L SF +F L +DLS I I G +
Sbjct: 45 KIPDNLPFSTKNL------DLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQ 97
Query: 472 PLPE--------------------EISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELL 511
L +S L+ +V ++ + SL N P + + K+L+EL
Sbjct: 98 SLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE-NFP--IGHLKTLKELN 154
Query: 512 MAYNQF-SGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQAL 555
+A+N S +P + L LE LDLSSNK+ +DL+ L +
Sbjct: 155 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 199
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 8/155 (5%)
Query: 423 NLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLEN 482
+L+ L +D+S F SL + ++ N N LP+ + L N
Sbjct: 443 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF-------LPDIFTELRN 495
Query: 483 VVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLS 542
+ +DLS L P + + SL+ L M++N F L L+VLD S N +
Sbjct: 496 LTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 555
Query: 543 GSIPSDLQNL-QALRSLNLTFNNLEGVVPSEGIFR 576
S +LQ+ +L LNLT N+ + +
Sbjct: 556 TSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQ 590
Score = 33.1 bits (74), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 110 NLPREIGNLFRLRVLNISFNNLQG-ELPVNISKLTELKMLDLMANKITGRVTDDQLRNLR 168
N P IG+L L+ LN++ N +Q +LP S LT L+ LDL +NKI D LR L
Sbjct: 141 NFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD-LRVLH 197
Query: 169 SL 170
+
Sbjct: 198 QM 199
Score = 33.1 bits (74), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 24/165 (14%)
Query: 98 RSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITG 157
+ ++L K+ NLP F + L++SFN L+ + EL++LDL +I
Sbjct: 37 QCMELNFYKIPDNLP------FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ- 89
Query: 158 RVTDDQLRNLRSLQVL----NFGKNLLWGSIP--PSIANLIP--SDLSRLEN-------- 201
+ D ++L L L N ++L G+ S+ L+ ++L+ LEN
Sbjct: 90 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 149
Query: 202 LKVLDLTINRLAG-TVPSTIYNMTSLVHLRLASNQLGGEIPYDVR 245
LK L++ N + +P N+T+L HL L+SN++ D+R
Sbjct: 150 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR 194
Score = 29.6 bits (65), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 87 ISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELK 146
I + NL+FL Q Q +LS P +L L+VLN+S NN L L+
Sbjct: 489 IFTELRNLTFLDLSQCQLEQLS---PTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 545
Query: 147 MLDLMANKITGRVTDDQLRNLRSLQVLNFGKN 178
+LD N I + SL LN +N
Sbjct: 546 VLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN 577
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 45/189 (23%)
Query: 660 TGNFSHENLIGSGSFGSVL--HNERTGSW-----------------KSFIAECETLRNVR 700
+ + + ++G GSFG V+ ++ TG +S + E + L+ +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 701 HRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK-NELD-------ITSAL 752
H N+ KL ++ + LV E + G L D I ++ +E+D + S +
Sbjct: 85 HPNIXKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 139
Query: 753 DYLHNDCEVPVVHSDLKPGNILLD---EEMTAKVGDFGLARFLLERVDNQSSISSTHVFM 809
Y H + +VH DLKP N+LL+ ++ ++ DFGL+ + I
Sbjct: 140 TYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI------- 189
Query: 810 GSIGYVPPE 818
G+ Y+ PE
Sbjct: 190 GTAYYIAPE 198
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 480 LENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFS-GPIPNIVAELKGLEVLDLSS 538
L N++ +D+S SLE L MA N F +P+I EL+ L LDLS
Sbjct: 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479
Query: 539 NKLSGSIPSDLQNLQALRSLNLTFNNL 565
+L P+ +L +L+ LN++ NN
Sbjct: 480 CQLEQLSPTAFNSLSSLQVLNMSHNNF 506
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 31/165 (18%)
Query: 412 EIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILR 471
+IP +P S NL DLS N L SF +F L +DLS I I G +
Sbjct: 21 KIPDNLPFSTKNL------DLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQ 73
Query: 472 PLPE--------------------EISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELL 511
L +S L+ +V ++ + SL N P + + K+L+EL
Sbjct: 74 SLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE-NFP--IGHLKTLKELN 130
Query: 512 MAYNQF-SGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQAL 555
+A+N S +P + L LE LDLSSNK+ +DL+ L +
Sbjct: 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 473 LPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLE 532
LP+ + L N+ +DLS L P + + SL+ L M++N F L L+
Sbjct: 462 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 521
Query: 533 VLDLSSNKLSGSIPSDLQNL-QALRSLNLTFNNLEGVVPSEGIFR 576
VLD S N + S +LQ+ +L LNLT N+ + +
Sbjct: 522 VLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQ 566
Score = 33.1 bits (74), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 110 NLPREIGNLFRLRVLNISFNNLQG-ELPVNISKLTELKMLDLMANKITGRVTDDQLRNLR 168
N P IG+L L+ LN++ N +Q +LP S LT L+ LDL +NKI D LR L
Sbjct: 117 NFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD-LRVLH 173
Query: 169 SL 170
+
Sbjct: 174 QM 175
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 24/165 (14%)
Query: 98 RSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITG 157
+ ++L K+ NLP F + L++SFN L+ + EL++LDL +I
Sbjct: 13 QCMELNFYKIPDNLP------FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT 66
Query: 158 RVTDDQLRNLRSLQVL----NFGKNLLWGSIP--PSIANLIP--SDLSRLEN-------- 201
+ D ++L L L N ++L G+ S+ L+ ++L+ LEN
Sbjct: 67 -IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 125
Query: 202 LKVLDLTINRLAG-TVPSTIYNMTSLVHLRLASNQLGGEIPYDVR 245
LK L++ N + +P N+T+L HL L+SN++ D+R
Sbjct: 126 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR 170
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 134/306 (43%), Gaps = 56/306 (18%)
Query: 94 LSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMAN 153
L+ L I NN+L+ P + NL +L ++I NN Q ++ LT L L L N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKL--VDILMNNNQIADITPLANLTNLTGLTLFNN 117
Query: 154 KIT------------------GRVTD-DQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPS 194
+IT ++D L L SLQ LNFG + +L P
Sbjct: 118 QITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGN---------QVTDLKP- 167
Query: 195 DLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDF 254
L+ L L+ LD++ N+++ S + +T+L L +NQ+ P + L NL +
Sbjct: 168 -LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGI---LTNLDEL 221
Query: 255 IYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGD 314
N+ K G+L +LTN+ + + +N + P L L L +G N+I
Sbjct: 222 SLNGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQI----- 272
Query: 315 DEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIP-ASI 373
S I+ L T L L L+ NQ E P I N N L+ L L N+I P +S+
Sbjct: 273 ----SNISPLAGLTALTNLELNENQLEDISP--ISNLKN-LTYLTLYFNNISDISPVSSL 325
Query: 374 GRLRSL 379
+L+ L
Sbjct: 326 TKLQRL 331
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 119/269 (44%), Gaps = 42/269 (15%)
Query: 91 IGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDL 150
+ NL+ L ++L +N +S + L L+ LN F N +L ++ LT L+ LD+
Sbjct: 125 LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLN--FGNQVTDLKP-LANLTTLERLDI 179
Query: 151 MANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTIN 210
+NK++ +L NL SL N I+++ P L L NL L L N
Sbjct: 180 SSNKVSDISVLAKLTNLESLIATN-----------NQISDITP--LGILTNLDELSLNGN 226
Query: 211 RLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLH 270
+L T+ ++T+L L LA+NQ+ P L L + N+ + P L
Sbjct: 227 QLKDI--GTLASLTNLTDLDLANNQISNLAPL---SGLTKLTELKLGANQISNISP--LA 279
Query: 271 NLTNIQIIRMTHNLLEGTLP-PGLGNLPFLRTYNIGFNKI-----VSSGD--------DE 316
LT + + + N LE P L NL +L Y FN I VSS +
Sbjct: 280 GLTALTNLELNENQLEDISPISNLKNLTYLTLY---FNNISDISPVSSLTKLQRLFFYNN 336
Query: 317 GLSFITSLTNSTHLNYLALDGNQFEGKIP 345
+S ++SL N T++N+L+ NQ P
Sbjct: 337 KVSDVSSLANLTNINWLSAGHNQISDLTP 365
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 161/383 (42%), Gaps = 49/383 (12%)
Query: 194 SDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLD 253
+DL ++ L+ L I + G + + +L + ++NQL P L L+D
Sbjct: 38 TDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITPLK---NLTKLVD 89
Query: 254 FIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSG 313
+ N+ P L NLTN+ + + +N + P L NL L + N I
Sbjct: 90 ILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTI---S 142
Query: 314 DDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASI 373
D LS +TSL LN+ GNQ P + N + L +L + N + + +
Sbjct: 143 DISALSGLTSLQ---QLNF----GNQVTDLKP--LANLT-TLERLDISSNKVSDI--SVL 190
Query: 374 GRLRSLTLLDLSYNSISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLS 433
+L +L L + N IS P+ I + G +LA+L L +DL+
Sbjct: 191 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG----TLASLTNLTDLDLA 246
Query: 434 GNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSL 493
N+++ P+S L + L N+I+ + PL + L + ++L++N L
Sbjct: 247 NNQISNLAPLS--GLTKLTELKLGANQISN------ISPL----AGLTALTNLELNENQL 294
Query: 494 SGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQ 553
P + N K+L L + +N S P V+ L L+ L +NK+S S L NL
Sbjct: 295 EDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLT 348
Query: 554 ALRSLNLTFNNLEGVVPSEGIFR 576
+ L+ N + + P + R
Sbjct: 349 NINWLSAGHNQISDLTPLANLTR 371
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 685 SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN 744
S K + E + +R + H N+VK+ S+ + + + E S + +++ + N
Sbjct: 51 SVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLAN 110
Query: 745 ELD---------------ITSALDYLHNDCEVPVVHSDLKPGNILLD-EEMTAKVGDFGL 788
L+ + L Y+H+ V+H DLKP N+ ++ E++ K+GDFGL
Sbjct: 111 VLEQGPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGL 167
Query: 789 ARFLLERVDNQSSISS 804
AR + ++ +S
Sbjct: 168 ARIMDPHYSHKGHLSE 183
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 54/189 (28%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--HGERKN 744
+ F E E L ++H+++V+ C+ L +V+E++ +G L ++ HG
Sbjct: 88 QDFQREAELLTMLQHQHIVRFFGVCTEGRP-----LLMVFEYMRHGDLNRFLRSHGPDAK 142
Query: 745 EL---------------------DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKV 783
L + + + YL + VH DL N L+ + + K+
Sbjct: 143 LLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKI 199
Query: 784 GDFGLARFLLERVDNQSSISSTHVF------MGSIGYVPPEYGLGERPSTAGDVPTSESF 837
GDFG++R I ST + M I ++PPE L + +T DV +
Sbjct: 200 GDFGMSR----------DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS---- 245
Query: 838 AGEFNIVKW 846
F +V W
Sbjct: 246 ---FGVVLW 251
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 746 LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISST 805
+ I A+++LH+ ++H DLKP NI + KVGDFGL + + + Q+ ++
Sbjct: 171 IQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 227
Query: 806 HVF---MGSIG---YVPPEYGLGERPSTAGDV 831
+ G +G Y+ PE G S D+
Sbjct: 228 PAYATHXGQVGTKLYMSPEQIHGNNYSHKVDI 259
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 720 EFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCEVP-------VVHSDLKPGN 772
+++ +V E N L W+ ++K +D Y N E +VHSDLKP N
Sbjct: 129 QYIYMVME-CGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 185
Query: 773 ILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L+ + M K+ DFG+A + + D S + + V G++ Y+PPE
Sbjct: 186 FLIVDGML-KLIDFGIANQM--QPDTTSVVKDSQV--GTVNYMPPE 226
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 720 EFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCEVP-------VVHSDLKPGN 772
+++ +V E N L W+ ++K +D Y N E +VHSDLKP N
Sbjct: 129 QYIYMVME-CGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 185
Query: 773 ILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L+ + M K+ DFG+A + + D S + + V G++ Y+PPE
Sbjct: 186 FLIVDGML-KLIDFGIANQM--QPDTTSVVKDSQV--GAVNYMPPE 226
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 720 EFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCEVP-------VVHSDLKPGN 772
+++ +V E N L W+ ++K +D Y N E +VHSDLKP N
Sbjct: 129 QYIYMVME-CGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 185
Query: 773 ILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L+ + M K+ DFG+A + + D S + + V G++ Y+PPE
Sbjct: 186 FLIVDGML-KLIDFGIANQM--QPDTTSVVKDSQV--GTVNYMPPE 226
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 196 LSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFI 255
+ L N++ L L N+L S + +T+L +L L NQL +P V D L NL + +
Sbjct: 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELV 115
Query: 256 YCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGL-GNLPFLRTYNIGFNKIVSSGD 314
N+ G LTN+ + + HN L+ +LP G+ L L ++ +N++ S
Sbjct: 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQSLP- 173
Query: 315 DEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGN 363
EG+ T L L L NQ + +P+ + + L ++L N
Sbjct: 174 -EGV-----FDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLHDN 215
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 86/234 (36%), Gaps = 63/234 (26%)
Query: 292 GLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEG--------- 342
G+ LP +R +G NK L I++L T+L YL L GNQ +
Sbjct: 58 GIQYLPNVRYLALGGNK---------LHDISALKELTNLTYLILTGNQLQSLPNGVFDKL 108
Query: 343 --------------KIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNS 388
+P+ + + L+ L L N + +L +LT LDLSYN
Sbjct: 109 TNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQ 168
Query: 389 ISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNF 448
+ +P G+ + L LK L L N+L F
Sbjct: 169 LQS---------------------LPEGVFDKLTQLKDLR---LYQNQLKSVPDGVFDRL 204
Query: 449 QSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLK 502
SL I L +N + P GI R L E I++ VV NS P+S K
Sbjct: 205 TSLQYIWLHDNPWDCTCP-GI-RYLSEWINKHSGVVR-----NSAGSVAPDSAK 251
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 477 ISRLENVVTIDLSDNSLSGNLPNSL-KNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLD 535
+ L N+ + L+ N L LPN + +L+EL++ NQ + +L L L+
Sbjct: 81 LKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139
Query: 536 LSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNV 581
L+ N+L L L L+L++N L+ + EG+F ++ +
Sbjct: 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSL--PEGVFDKLTQL 183
Score = 33.9 bits (76), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
Query: 465 IPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNI 524
+P G+ ++++ L+ +V ++ SL + + L N L L +A+NQ +
Sbjct: 100 LPNGVF----DKLTNLKELVLVENQLQSLPDGVFDKLTN---LTYLNLAHNQLQSLPKGV 152
Query: 525 VAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVH-- 582
+L L LDLS N+L L L+ L L N L+ V +G+F ++++
Sbjct: 153 FDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSV--PDGVFDRLTSLQYI 210
Query: 583 -LKGNPKLC 590
L NP C
Sbjct: 211 WLHDNPWDC 219
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 8/163 (4%)
Query: 420 SLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISR 479
+L L L + L+GN+L F +L + L N++ +P G+ +
Sbjct: 80 ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQS-LPDGVF-------DK 131
Query: 480 LENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSN 539
L N+ ++L+ N L +L EL ++YNQ + +L L+ L L N
Sbjct: 132 LTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191
Query: 540 KLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVH 582
+L L +L+ + L N + P N H
Sbjct: 192 QLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYLSEWINKH 234
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 78/187 (41%), Gaps = 35/187 (18%)
Query: 656 LRRATGNFSHENLIGSGSFGSVLHNERTGSWKSF----------IAECETLRNVRHRNLV 705
L+ ++ +IG G+FG V S K + I ++ R+++
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 706 KLITS-------CSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-------LDITSA 751
S C+ D K +L +V E++ G L + + E ++ A
Sbjct: 130 AFANSPWVVQLFCAFQDDK---YLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLA 186
Query: 752 LDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGS 811
LD +H+ + ++H D+KP N+LLD+ K+ DFG + +++ + +G+
Sbjct: 187 LDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM-----DETGMVHCDTAVGT 238
Query: 812 IGYVPPE 818
Y+ PE
Sbjct: 239 PDYISPE 245
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 56/226 (24%), Positives = 88/226 (38%), Gaps = 42/226 (18%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN----MEF--LALVYEFLSNGSL 734
E+ G E E ++RH N+++L DS +E+ L VY L S
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFH--DSTRVYLILEYAPLGTVYRELQKLSK 104
Query: 735 GDWIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791
D E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 105 FD----EQRTATYITELANALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSV- 156
Query: 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDV--------------PTSE-- 835
+ S G++ Y+PPE G D+ P E
Sbjct: 157 -------HAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 836 SFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCL 881
++ + + VE P+ V + + +L+ N SQ L + L
Sbjct: 210 TYQDTYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 33/128 (25%)
Query: 688 SFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
I+E E ++ + +H+N++ L+ +C+ L ++ E+ S G+L +++ R L
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGP-----LYVIVEYASKGNLREYLQARRPPGL 133
Query: 747 D------------------------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAK 782
+ + ++YL + +H DL N+L+ E+ K
Sbjct: 134 EYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMK 190
Query: 783 VGDFGLAR 790
+ DFGLAR
Sbjct: 191 IADFGLAR 198
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 38/175 (21%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721
+F HEN+I ++ + +R S+++F E ++ + +L ++I++
Sbjct: 65 HFKHENII------TIFNIQRPDSFENF-NEVYIIQELMQTDLHRVIST----------- 106
Query: 722 LALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA 781
+ LS+ + +I+ + A+ LH V+H DLKP N+L++
Sbjct: 107 -----QMLSDDHIQYFIYQTLR-------AVKVLHGSN---VIHRDLKPSNLLINSNCDL 151
Query: 782 KVGDFGLARFLLERVDNQSSISSTHV----FMGSIGYVPPEYGL-GERPSTAGDV 831
KV DFGLAR + E + S + F+ + Y PE L + S A DV
Sbjct: 152 KVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDV 206
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 117/308 (37%), Gaps = 72/308 (23%)
Query: 166 NLRSLQVLNFGKNLLWGSIPP----------SIANLIPSDLSRLENLKVLDLTINRLAGT 215
+LR +Q + G + +PP I + D L+NL L L N+++
Sbjct: 32 HLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKI 91
Query: 216 VPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNI 275
P + L L L+ NQL E+P + +P L + K+ S+ N N
Sbjct: 92 SPGAFAPLVKLERLYLSKNQLK-ELP----EKMPKTLQELRVHENEITKVRKSVFNGLNQ 146
Query: 276 QIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLAL 335
I+ +G N + SSG + G + L+Y+ +
Sbjct: 147 MIV-----------------------VELGTNPLKSSGIENG-----AFQGMKKLSYIRI 178
Query: 336 DGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPI 395
IP+ + L++L+L GN I AS+ L +L L LS+NSIS
Sbjct: 179 ADTNIT-TIPQGL---PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA---- 230
Query: 396 EIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSID 455
+ G SLAN L ++ L+ N+L ++P + + + +
Sbjct: 231 -----------------VDNG---SLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVY 269
Query: 456 LSNNRING 463
L NN I+
Sbjct: 270 LHNNNISA 277
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 486 IDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSI 545
+DL +N ++ KN K+L L++ N+ S P A L LE L LS N+L +
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-EL 115
Query: 546 PSDL-QNLQALR 556
P + + LQ LR
Sbjct: 116 PEKMPKTLQELR 127
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 89/219 (40%), Gaps = 28/219 (12%)
Query: 100 IQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRV 159
+ LQNNK++ + NL L L + N + P + L +L+ L L N
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN------ 110
Query: 160 TDDQLRNL-----RSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRL-- 212
QL+ L ++LQ L +N I + S + L + V++L N L
Sbjct: 111 ---QLKELPEKMPKTLQELRVHEN--------EITKVRKSVFNGLNQMIVVELGTNPLKS 159
Query: 213 AGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNL 272
+G M L ++R+A + IP + P+L + N+ T SL L
Sbjct: 160 SGIENGAFQGMKKLSYIRIADTNI-TTIPQGLP---PSLTELHLDGNKITKVDAASLKGL 215
Query: 273 TNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVS 311
N+ + ++ N + L N P LR ++ NK+V
Sbjct: 216 NNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK 254
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 18/143 (12%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-- 738
E+ G E E ++RH N++++ D K + L+ EF G L +
Sbjct: 53 EKEGVEHQLRREIEIQSHLRHPNILRMYNYFH--DRKR---IYLMLEFAPRGELYKELQK 107
Query: 739 HG---ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795
HG E+++ + D LH E V+H D+KP N+L+ + K+ DFG +
Sbjct: 108 HGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV----- 162
Query: 796 VDNQSSISSTHVFMGSIGYVPPE 818
+ G++ Y+PPE
Sbjct: 163 ---HAPSLRRRXMCGTLDYLPPE 182
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 18/143 (12%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-- 738
E+ G E E ++RH N++++ D K + L+ EF G L +
Sbjct: 53 EKEGVEHQLRREIEIQSHLRHPNILRMYNYFH--DRKR---IYLMLEFAPRGELYKELQK 107
Query: 739 HG---ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795
HG E+++ + D LH E V+H D+KP N+L+ + K+ DFG +
Sbjct: 108 HGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV----- 162
Query: 796 VDNQSSISSTHVFMGSIGYVPPE 818
+ G++ Y+PPE
Sbjct: 163 ---HAPSLRRRXMCGTLDYLPPE 182
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 18/143 (12%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-- 738
E+ G E E ++RH N++++ D K + L+ EF G L +
Sbjct: 54 EKEGVEHQLRREIEIQSHLRHPNILRMYNYFH--DRKR---IYLMLEFAPRGELYKELQK 108
Query: 739 HG---ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795
HG E+++ + D LH E V+H D+KP N+L+ + K+ DFG +
Sbjct: 109 HGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV----- 163
Query: 796 VDNQSSISSTHVFMGSIGYVPPE 818
+ G++ Y+PPE
Sbjct: 164 ---HAPSLRRRXMCGTLDYLPPE 183
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 117/308 (37%), Gaps = 72/308 (23%)
Query: 166 NLRSLQVLNFGKNLLWGSIPP----------SIANLIPSDLSRLENLKVLDLTINRLAGT 215
+LR +Q + G + +PP I + D L+NL L L N+++
Sbjct: 32 HLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKI 91
Query: 216 VPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNI 275
P + L L L+ NQL E+P + +P L + K+ S+ N N
Sbjct: 92 SPGAFAPLVKLERLYLSKNQLK-ELP----EKMPKTLQELRVHENEITKVRKSVFNGLNQ 146
Query: 276 QIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLAL 335
I+ +G N + SSG + G + L+Y+ +
Sbjct: 147 MIV-----------------------VELGTNPLKSSGIENG-----AFQGMKKLSYIRI 178
Query: 336 DGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPI 395
IP+ + L++L+L GN I AS+ L +L L LS+NSIS
Sbjct: 179 ADTNIT-TIPQGL---PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA---- 230
Query: 396 EIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSID 455
+ G SLAN L ++ L+ N+L ++P + + + +
Sbjct: 231 -----------------VDNG---SLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVY 269
Query: 456 LSNNRING 463
L NN I+
Sbjct: 270 LHNNNISA 277
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 486 IDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSI 545
+DL +N ++ KN K+L L++ N+ S P A L LE L LS N+L +
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-EL 115
Query: 546 PSDL-QNLQALR 556
P + + LQ LR
Sbjct: 116 PEKMPKTLQELR 127
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 89/219 (40%), Gaps = 28/219 (12%)
Query: 100 IQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRV 159
+ LQNNK++ + NL L L + N + P + L +L+ L L N
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN------ 110
Query: 160 TDDQLRNL-----RSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRL-- 212
QL+ L ++LQ L +N I + S + L + V++L N L
Sbjct: 111 ---QLKELPEKMPKTLQELRVHEN--------EITKVRKSVFNGLNQMIVVELGTNPLKS 159
Query: 213 AGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNL 272
+G M L ++R+A + IP + P+L + N+ T SL L
Sbjct: 160 SGIENGAFQGMKKLSYIRIADTNI-TTIPQGLP---PSLTELHLDGNKITKVDAASLKGL 215
Query: 273 TNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVS 311
N+ + ++ N + L N P LR ++ NK+V
Sbjct: 216 NNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK 254
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 763 VVHSDLKPGNILLDEEMTAKVGDFGLAR 790
++H DLKP N LL+++ + KV DFGLAR
Sbjct: 150 IIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 743 KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796
K + I AL++LH+ ++ V+H D+KP N+L++ K+ DFG++ +L++ V
Sbjct: 113 KIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV 164
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 34/186 (18%)
Query: 657 RRATGNFSHENLIGSGSFGSVLHNERTGSWKSFIA--------------ECETLRNVRHR 702
R +F+ ++G GSFG V+ +ER G+ + + EC T+ R
Sbjct: 16 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVEC-TMVEKRVL 74
Query: 703 NLVKLITSCSSLDS--KNMEFLALVYEFLSNGSLGDWIH--GERKN------ELDITSAL 752
L + L S + M+ L V E+++ G L I G K +I L
Sbjct: 75 ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGL 134
Query: 753 DYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSI 812
+L + +++ DLK N++LD E K+ DFG+ + +N +T F G+
Sbjct: 135 FFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK------ENIWDGVTTKXFCGTP 185
Query: 813 GYVPPE 818
Y+ PE
Sbjct: 186 DYIAPE 191
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 34/179 (18%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLAGTPEYLAPE 208
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 57/224 (25%), Positives = 89/224 (39%), Gaps = 38/224 (16%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 52 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 111
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 112 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---- 160
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDV--------------PTSE--SF 837
V SS +T G++ Y+PPE G D+ P E ++
Sbjct: 161 --VHAPSSRRTT--LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTY 216
Query: 838 AGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCL 881
+ + VE P+ V + + +L+ N SQ L + L
Sbjct: 217 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPXLREVL 260
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 19/135 (14%)
Query: 690 IAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI----HGERKNE 745
+AE ++ + + +V++I C + E LV E G L ++ H + KN
Sbjct: 418 LAEANVMQQLDNPYIVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRHVKDKNI 471
Query: 746 LD----ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSS 801
++ ++ + YL E VH DL N+LL + AK+ DFGL++ L R D
Sbjct: 472 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYY 526
Query: 802 ISSTHVFMGSIGYVP 816
+ TH Y P
Sbjct: 527 KAQTHGKWPVKWYAP 541
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 37 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 96
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+++ G + + R I +YLH+
Sbjct: 97 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS-- 154
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 155 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 204
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 205 ILSKGYNKAVD 215
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 34/179 (18%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLXGTPEYLAPE 208
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 19/136 (13%)
Query: 689 FIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI----HGERKN 744
+AE ++ + + +V++I C + E LV E G L ++ H + KN
Sbjct: 418 LLAEANVMQQLDNPYIVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRHVKDKN 471
Query: 745 ELD----ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQS 800
++ ++ + YL E VH DL N+LL + AK+ DFGL++ L R D
Sbjct: 472 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENY 526
Query: 801 SISSTHVFMGSIGYVP 816
+ TH Y P
Sbjct: 527 YKAQTHGKWPVKWYAP 542
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 52 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 111
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 112 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---- 160
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
V SS +T G++ Y+PPE
Sbjct: 161 --VHAPSSRRTT--LCGTLDYLPPE 181
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 51 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 110
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 111 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---- 159
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
V SS +T G++ Y+PPE
Sbjct: 160 --VHAPSSRRTT--LCGTLDYLPPE 180
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 55/146 (37%), Gaps = 33/146 (22%)
Query: 667 NLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNVRHRNLVKLITSC 711
LIG G FG V H G K+F E R RH N+V + +C
Sbjct: 39 ELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 712 SSLDSKNMEFLALV---------YEFLSNGSLGDWIHGERKNELDITSALDYLHNDCEVP 762
S LA++ Y + + + ++ R+ +I + YLH
Sbjct: 99 MSPPH-----LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG--- 150
Query: 763 VVHSDLKPGNILLDEEMTAKVGDFGL 788
++H DLK N+ D + DFGL
Sbjct: 151 ILHKDLKSKNVFYDNGKVV-ITDFGL 175
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 46 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 105
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 106 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---- 154
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
V SS +T G++ Y+PPE
Sbjct: 155 --VHAPSSRRTT--LCGTLDYLPPE 175
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 44 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 103
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 104 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---- 152
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
V SS +T G++ Y+PPE
Sbjct: 153 --VHAPSSRRTT--LCGTLDYLPPE 173
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 50 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 109
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 110 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---- 158
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
V SS +T G++ Y+PPE
Sbjct: 159 --VHAPSSRRTT--LCGTLDYLPPE 179
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 50 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 109
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 110 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---- 158
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
V SS +T G++ Y+PPE
Sbjct: 159 --VHAPSSRRTT--LCGTLDYLPPE 179
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 93/246 (37%), Gaps = 52/246 (21%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK--- 743
+ ++E L+ V H +++KL +CS L L+ E+ GSL ++ RK
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGP-----LLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 744 -----------NELD------------------ITSALDYLHNDCEVPVVHSDLKPGNIL 774
+ LD I+ + YL E+ +VH DL NIL
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNIL 182
Query: 775 LDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTS 834
+ E K+ DFGL+R + E S + + G +P ++ E S + T+
Sbjct: 183 VAEGRKMKISDFGLSRDVYE---EDSXVKRSQ------GRIPVKWMAIE--SLFDHIYTT 231
Query: 835 ESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTT 894
+S F ++ W L N + PE R ++ D + + L C
Sbjct: 232 QSDVWSFGVLLWEIVTLGGNPYPGIPPE-RLFNLLKTGHRMERPDNCSEEMYRLMLQCWK 290
Query: 895 ESPGGR 900
+ P R
Sbjct: 291 QEPDKR 296
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 13/112 (11%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKN 744
K E ++ V H+N++ L+ + K +E VY L + +L I E +
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLXQVIQMELDH 125
Query: 745 E------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
E + + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 126 ERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 34/179 (18%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPE 208
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 34/179 (18%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+++ G + + R I +YLH+
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS-- 180
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 181 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPE 229
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 13/112 (11%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKN 744
K E ++ V H+N++ L+ + K +E VY L + +L I E +
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLXQVIQMELDH 125
Query: 745 E------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
E + + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 126 ERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 107 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---- 155
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
V SS +T G++ Y+PPE
Sbjct: 156 --VHAPSSRRTT--LCGTLDYLPPE 176
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 43 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+++ G + + R I +YLH+
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 160
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 161 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 210
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 211 ILSKGYNKAVD 221
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 662 NFSHENLIGSGSFGSVLH----NERTGSWKSFIAECETL--RNVR-------HRNLVKLI 708
+F ++++G G+ G++++ + R + K + EC + R V+ H N+++
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYF 84
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDI---------TSALDYLHNDC 759
C+ D + +++A+ L +L +++ + L + TS L +LH+
Sbjct: 85 --CTEKD-RQFQYIAIE---LCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS-- 136
Query: 760 EVPVVHSDLKPGNILLDE-----EMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGY 814
+ +VH DLKP NIL+ ++ A + DFGL + L + S S G+ G+
Sbjct: 137 -LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL---AVGRHSFSRRSGVPGTEGW 192
Query: 815 VPPE 818
+ PE
Sbjct: 193 IAPE 196
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K +E VY L + +L I E +E
Sbjct: 77 MKXVNHKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 135 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 93/246 (37%), Gaps = 52/246 (21%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK--- 743
+ ++E L+ V H +++KL +CS L L+ E+ GSL ++ RK
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGP-----LLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 744 -----------NELD------------------ITSALDYLHNDCEVPVVHSDLKPGNIL 774
+ LD I+ + YL E+ +VH DL NIL
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNIL 182
Query: 775 LDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTS 834
+ E K+ DFGL+R + E S + + G +P ++ E S + T+
Sbjct: 183 VAEGRKMKISDFGLSRDVYE---EDSXVKRSQ------GRIPVKWMAIE--SLFDHIYTT 231
Query: 835 ESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTT 894
+S F ++ W L N + PE R ++ D + + L C
Sbjct: 232 QSDVWSFGVLLWEIVTLGGNPYPGIPPE-RLFNLLKTGHRMERPDNCSEEMYRLMLQCWK 290
Query: 895 ESPGGR 900
+ P R
Sbjct: 291 QEPDKR 296
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
++ +AL Y H+ V+H D+KP N+LL K+ DFG + V SS +T
Sbjct: 121 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTT- 170
Query: 807 VFMGSIGYVPPE 818
G++ Y+PPE
Sbjct: 171 -LCGTLDYLPPE 181
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 40/140 (28%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK--- 743
+ ++E L+ V H +++KL +CS L L+ E+ GSL ++ RK
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGP-----LLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 744 -----------NELD------------------ITSALDYLHNDCEVPVVHSDLKPGNIL 774
+ LD I+ + YL E+ +VH DL NIL
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNIL 182
Query: 775 LDEEMTAKVGDFGLARFLLE 794
+ E K+ DFGL+R + E
Sbjct: 183 VAEGRKMKISDFGLSRDVYE 202
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 133/300 (44%), Gaps = 44/300 (14%)
Query: 94 LSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMAN 153
L+ L I NN+L+ P + NL +L ++I NN Q ++ LT L L L N
Sbjct: 66 LNNLTQINFSNNQLTDITP--LKNLTKL--VDILMNNNQIADITPLANLTNLTGLTLFNN 121
Query: 154 KITGRVTDDQLRNLRSLQVLNFGKNLLWG-------------SIPPSIANLIPSDLSRLE 200
+IT D L+NL +L L N + S + +L P L+ L
Sbjct: 122 QITDI---DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKP--LANLT 176
Query: 201 NLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNR 260
L+ LD++ N+++ S + +T+L L +NQ+ P + L NL + N+
Sbjct: 177 TLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGI---LTNLDELSLNGNQ 231
Query: 261 FTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSF 320
K G+L +LTN+ + + +N + P L L L +G N+I S
Sbjct: 232 L--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQI---------SN 278
Query: 321 ITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIP-ASIGRLRSL 379
I+ L T L L L+ NQ E P I N N L+ L L N+I P +S+ +L+ L
Sbjct: 279 ISPLAGLTALTNLELNENQLEDISP--ISNLKN-LTYLTLYFNNISDISPVSSLTKLQRL 335
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 120/270 (44%), Gaps = 44/270 (16%)
Query: 91 IGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLN-ISFNNLQGELPVNISKLTELKMLD 149
+ NL+ L ++L +N +S +I L L L +SF N +L ++ LT L+ LD
Sbjct: 129 LKNLTNLNRLELSSNTIS-----DISALSGLTSLQQLSFGNQVTDLKP-LANLTTLERLD 182
Query: 150 LMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTI 209
+ +NK++ +L NL SL N I+++ P L L NL L L
Sbjct: 183 ISSNKVSDISVLAKLTNLESLIATN-----------NQISDITP--LGILTNLDELSLNG 229
Query: 210 NRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSL 269
N+L T+ ++T+L L LA+NQ+ P L L + N+ + P L
Sbjct: 230 NQLKDI--GTLASLTNLTDLDLANNQISNLAPL---SGLTKLTELKLGANQISNISP--L 282
Query: 270 HNLTNIQIIRMTHNLLEGTLP-PGLGNLPFLRTYNIGFNKI-----VSS--------GDD 315
LT + + + N LE P L NL +L Y FN I VSS +
Sbjct: 283 AGLTALTNLELNENQLEDISPISNLKNLTYLTLY---FNNISDISPVSSLTKLQRLFFAN 339
Query: 316 EGLSFITSLTNSTHLNYLALDGNQFEGKIP 345
+S ++SL N T++N+L+ NQ P
Sbjct: 340 NKVSDVSSLANLTNINWLSAGHNQISDLTP 369
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 162/383 (42%), Gaps = 49/383 (12%)
Query: 194 SDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLD 253
+DL ++ L+ L I + G + + +L + ++NQL P L L+D
Sbjct: 42 TDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITPLK---NLTKLVD 93
Query: 254 FIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSG 313
+ N+ P L NLTN+ + + +N + P L NL L + N I
Sbjct: 94 ILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTI---S 146
Query: 314 DDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASI 373
D LS +TSL L++ GNQ P + N + L +L + N + + +
Sbjct: 147 DISALSGLTSLQ---QLSF----GNQVTDLKP--LANLT-TLERLDISSNKVSDI--SVL 194
Query: 374 GRLRSLTLLDLSYNSISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLS 433
+L +L L + N IS P+ I + G +LA+L L +DL+
Sbjct: 195 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG----TLASLTNLTDLDLA 250
Query: 434 GNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSL 493
N+++ P+S L + L N+I+ + PL + L + ++L++N L
Sbjct: 251 NNQISNLAPLS--GLTKLTELKLGANQISN------ISPL----AGLTALTNLELNENQL 298
Query: 494 SGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQ 553
P + N K+L L + +N S P V+ L L+ L ++NK+S S L NL
Sbjct: 299 EDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSDV--SSLANLT 352
Query: 554 ALRSLNLTFNNLEGVVPSEGIFR 576
+ L+ N + + P + R
Sbjct: 353 NINWLSAGHNQISDLTPLANLTR 375
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
E ++H DLKP N LL+++ + K+ DFGLAR
Sbjct: 149 ESGIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 54/189 (28%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--HGERKN 744
+ F E E L ++H+++V+ C+ L +V+E++ +G L ++ HG
Sbjct: 65 QDFQREAELLTMLQHQHIVRFFGVCTEGRP-----LLMVFEYMRHGDLNRFLRSHGPDAK 119
Query: 745 EL---------------------DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKV 783
L + + + YL + VH DL N L+ + + K+
Sbjct: 120 LLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKI 176
Query: 784 GDFGLARFLLERVDNQSSISSTHVF------MGSIGYVPPEYGLGERPSTAGDVPTSESF 837
GDFG++R I ST + M I ++PPE L + +T DV +
Sbjct: 177 GDFGMSR----------DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS---- 222
Query: 838 AGEFNIVKW 846
F +V W
Sbjct: 223 ---FGVVLW 228
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 54/189 (28%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI--HGERKN 744
+ F E E L ++H+++V+ C+ L +V+E++ +G L ++ HG
Sbjct: 59 QDFQREAELLTMLQHQHIVRFFGVCTEGRP-----LLMVFEYMRHGDLNRFLRSHGPDAK 113
Query: 745 EL---------------------DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKV 783
L + + + YL + VH DL N L+ + + K+
Sbjct: 114 LLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKI 170
Query: 784 GDFGLARFLLERVDNQSSISSTHVF------MGSIGYVPPEYGLGERPSTAGDVPTSESF 837
GDFG++R I ST + M I ++PPE L + +T DV +
Sbjct: 171 GDFGMSR----------DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS---- 216
Query: 838 AGEFNIVKW 846
F +V W
Sbjct: 217 ---FGVVLW 222
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 428 NQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTID 487
N +D G LT EIP + +++ I L N I IP G P + + ID
Sbjct: 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKV-IPPGAFSPY-------KKLRRID 62
Query: 488 LSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPS 547
LS+N +S P++ + +SL L++ N+ + ++ L L++L L++NK++
Sbjct: 63 LSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVD 122
Query: 548 DLQNLQALRSLNLTFNNLEGVVPSEGIF---RNMSNVHLKGNPKLC 590
Q+L L L+L N L+ + ++G F R + +HL NP +C
Sbjct: 123 AFQDLHNLNLLSLYDNKLQTI--AKGTFSPLRAIQTMHLAQNPFIC 166
Score = 33.5 bits (75), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 418 PNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGIL 470
P + + KKL +IDLS N+++ P +F +SL S+ L N+I +PK +
Sbjct: 49 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLF 100
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 428 NQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTID 487
N +D G LT EIP + +++ I L N I IP G P + + ID
Sbjct: 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKV-IPPGAFSPY-------KKLRRID 62
Query: 488 LSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPS 547
LS+N +S P++ + +SL L++ N+ + ++ L L++L L++NK++
Sbjct: 63 LSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINXLRVD 122
Query: 548 DLQNLQALRSLNLTFNNLEGVVPSEGIF---RNMSNVHLKGNPKLC 590
Q+L L L+L N L+ + ++G F R + +HL NP +C
Sbjct: 123 AFQDLHNLNLLSLYDNKLQTI--AKGTFSPLRAIQTMHLAQNPFIC 166
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 418 PNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGIL 470
P + + KKL +IDLS N+++ P +F +SL S+ L N+I +PK +
Sbjct: 49 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLF 100
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 20/180 (11%)
Query: 420 SLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISR 479
+L +L Q++L ELT ++ + G L ++DLS+N+ L+ LP
Sbjct: 50 TLMPYTRLTQLNLDRCELT-KLQVD-GTLPVLGTLDLSHNQ---------LQSLPLLGQT 98
Query: 480 LENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSN 539
L + +D+S N L+ +L+ L+EL + N+ P ++ LE L L++N
Sbjct: 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158
Query: 540 KLSGSIPSDLQN-LQALRSLNLTFNNLEGVVPSEGIFRN--MSNVHLKGNPKLCLQLGCE 596
+L+ +P+ L N L+ L +L L N+L + +G F + + L GNP LC CE
Sbjct: 159 QLT-ELPAGLLNGLENLDTLLLQENSLYTI--PKGFFGSHLLPFAFLHGNPWLC---NCE 212
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 172 VLNFGKNLLWGSIPPSIANLIP-SDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLR 230
+L+ +NLL+ S+A L+P + L++L NL +LT ++ GT+P + L H +
Sbjct: 35 ILHLSENLLYTF---SLATLMPYTRLTQL-NLDRCELTKLQVDGTLP--VLGTLDLSHNQ 88
Query: 231 LASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLP 290
L S L G+ TLP L FNR T G+L L +Q + + N L+ TLP
Sbjct: 89 LQSLPLLGQ-------TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK-TLP 140
Query: 291 PGL 293
PGL
Sbjct: 141 PGL 143
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 64 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 123
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 124 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---- 172
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
V SS +T G++ Y+PPE
Sbjct: 173 --VHAPSSRRTT--LCGTLDYLPPE 193
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 28/144 (19%)
Query: 690 IAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI------HGERK 743
+ E E L+ + H+N+VKL +++ L+ EF GSL + +G +
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHK---VLIMEFCPCGSLYTVLEEPSNAYGLPE 111
Query: 744 NEL-----DITSALDYLHNDCEVPVVHSDLKPGNILL----DEEMTAKVGDFGLARFLLE 794
+E D+ +++L E +VH ++KPGNI+ D + K+ DFG AR E
Sbjct: 112 SEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR---E 165
Query: 795 RVDNQSSISSTHVFMGSIGYVPPE 818
D++ +S G+ Y+ P+
Sbjct: 166 LEDDEQFVS----LYGTEEYLHPD 185
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 40/181 (22%)
Query: 663 FSHENLIGSGSFGSVLHNERTGSWKSFI--------------AECETLRNVRHRNLVKLI 708
F E+ +G G+ V ++ G+ K + E L + H N++KL
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLK 114
Query: 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWI-----HGERKNE---LDITSALDYLHNDCE 760
+ ++LV E ++ G L D I + ER I A+ YLH E
Sbjct: 115 EIFETPTE-----ISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH---E 166
Query: 761 VPVVHSDLKPGNILLDE---EMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPP 817
+VH DLKP N+L + K+ DFGL++ V++Q + + G+ GY P
Sbjct: 167 NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI----VEHQVLMKTV---CGTPGYCAP 219
Query: 818 E 818
E
Sbjct: 220 E 220
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 412 EIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILR 471
++P IP+S N IDLS N L SF NF L +DLS I + I
Sbjct: 20 KVPDDIPSSTKN------IDLSFNPLKILKSYSFSNFSELQWLDLSRCEI-----ETIED 68
Query: 472 PLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGL 531
+ L N++ L+ N + P S SLE L+ + + + +L L
Sbjct: 69 KAWHGLHHLSNLI---LTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITL 125
Query: 532 EVLDLSSNKL-SGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVHLKGNPKLC 590
+ L+++ N + S +P+ NL L ++L++N ++ + ++ F L+ NP++
Sbjct: 126 KKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQF-------LRENPQVN 178
Query: 591 LQL 593
L L
Sbjct: 179 LSL 181
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 38/151 (25%)
Query: 669 IGSGSFGSVL--HNERTGSWKS-----------------FIAECETLRNVRHRNLVKLIT 709
+GSG++G VL ++ TG+ ++ + E L+ + H N++KL
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 710 SCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK-NELD-------ITSALDYLHNDCEV 761
D +N LV E G L D I +K +E+D + S YLH
Sbjct: 89 FFE--DKRNY---YLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH--- 140
Query: 762 PVVHSDLKPGNILLD---EEMTAKVGDFGLA 789
+VH DLKP N+LL+ + K+ DFGL+
Sbjct: 141 NIVHRDLKPENLLLESKSRDALIKIVDFGLS 171
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 13/112 (11%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKN 744
K E ++ V H+N++ L+ + K +E VY L + +L I E +
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLXQVIQMELDH 118
Query: 745 E------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
E + + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 119 ERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR 167
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 27/138 (19%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE------ 745
E E L+ + H ++K+ + D +V E + G L D + G ++ +
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAED------YYIVLELMEGGELFDKVVGNKRLKEATCKL 124
Query: 746 --LDITSALDYLHNDCEVPVVHSDLKPGNILL---DEEMTAKVGDFGLARFLLERVDNQS 800
+ A+ YLH E ++H DLKP N+LL +E+ K+ DFG ++ L E
Sbjct: 125 YFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE------ 175
Query: 801 SISSTHVFMGSIGYVPPE 818
S G+ Y+ PE
Sbjct: 176 -TSLMRTLCGTPTYLAPE 192
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 62/165 (37%), Gaps = 48/165 (29%)
Query: 669 IGSGSFGSVLHNERTGSWKS--------------------------FIAECETLRNVRHR 702
+G GSFG V R G W + FI E + ++ HR
Sbjct: 20 LGDGSFGVV----RRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 75
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALD 753
NL++L + K +V E GSL D + + + + + +
Sbjct: 76 NLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 129
Query: 754 YLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798
YL + +H DL N+LL K+GDFGL R L + D+
Sbjct: 130 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 62/165 (37%), Gaps = 48/165 (29%)
Query: 669 IGSGSFGSVLHNERTGSWKS--------------------------FIAECETLRNVRHR 702
+G GSFG V R G W + FI E + ++ HR
Sbjct: 16 LGDGSFGVV----RRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALD 753
NL++L + K +V E GSL D + + + + + +
Sbjct: 72 NLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 754 YLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798
YL + +H DL N+LL K+GDFGL R L + D+
Sbjct: 126 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 62/165 (37%), Gaps = 48/165 (29%)
Query: 669 IGSGSFGSVLHNERTGSWKS--------------------------FIAECETLRNVRHR 702
+G GSFG V R G W + FI E + ++ HR
Sbjct: 26 LGDGSFGVV----RRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALD 753
NL++L + K +V E GSL D + + + + + +
Sbjct: 82 NLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 135
Query: 754 YLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798
YL + +H DL N+LL K+GDFGL R L + D+
Sbjct: 136 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 62/165 (37%), Gaps = 48/165 (29%)
Query: 669 IGSGSFGSVLHNERTGSWKS--------------------------FIAECETLRNVRHR 702
+G GSFG V R G W + FI E + ++ HR
Sbjct: 26 LGDGSFGVV----RRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALD 753
NL++L + K +V E GSL D + + + + + +
Sbjct: 82 NLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 135
Query: 754 YLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798
YL + +H DL N+LL K+GDFGL R L + D+
Sbjct: 136 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 62/165 (37%), Gaps = 48/165 (29%)
Query: 669 IGSGSFGSVLHNERTGSWKS--------------------------FIAECETLRNVRHR 702
+G GSFG V R G W + FI E + ++ HR
Sbjct: 16 LGDGSFGVV----RRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALD 753
NL++L + K +V E GSL D + + + + + +
Sbjct: 72 NLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 754 YLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798
YL + +H DL N+LL K+GDFGL R L + D+
Sbjct: 126 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 57/138 (41%), Gaps = 14/138 (10%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER---- 742
K + E L + H N++ L + M L LV E L L IH +R
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTE-LMRTDLAQVIHDQRIVIS 132
Query: 743 --KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQS 800
+ + L LH E VVH DL PGNILL + + DF LAR ++ +
Sbjct: 133 PQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR------EDTA 186
Query: 801 SISSTHVFMGSIGYVPPE 818
+ TH ++ Y PE
Sbjct: 187 DANKTH-YVTHRWYRAPE 203
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 58/237 (24%), Positives = 99/237 (41%), Gaps = 36/237 (15%)
Query: 357 KLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIXXXXXXXXXXXXXNEIPGG 416
+++L GN I AS R+LT+L L N+++G I+
Sbjct: 35 RIFLHGNRISYVPAASFQSCRNLTILWLHSNALAG---IDAA------------------ 73
Query: 417 IPNSLANLKKLNQIDLSGN-ELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPE 475
+ L L Q+DLS N +L P +F L ++ L + P G+ R L
Sbjct: 74 ---AFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGP-GLFRGLAA 129
Query: 476 EISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLD 535
+ + L DN+L N+ ++ +L L + N+ + L L+ L
Sbjct: 130 -------LQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLL 182
Query: 536 LSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGI--FRNMSNVHLKGNPKLC 590
L N ++ P ++L L +L L NNL ++P+E + R++ + L NP +C
Sbjct: 183 LHQNHVARVHPHAFRDLGRLMTLYLFANNLS-MLPAEVLVPLRSLQYLRLNDNPWVC 238
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 62/165 (37%), Gaps = 48/165 (29%)
Query: 669 IGSGSFGSVLHNERTGSWKS--------------------------FIAECETLRNVRHR 702
+G GSFG V R G W + FI E + ++ HR
Sbjct: 16 LGDGSFGVV----RRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALD 753
NL++L + K +V E GSL D + + + + + +
Sbjct: 72 NLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 754 YLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798
YL + +H DL N+LL K+GDFGL R L + D+
Sbjct: 126 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 20/180 (11%)
Query: 420 SLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISR 479
+L +L Q++L ELT ++ + G L ++DLS+N+ L+ LP
Sbjct: 50 TLMPYTRLTQLNLDRCELT-KLQVD-GTLPVLGTLDLSHNQ---------LQSLPLLGQT 98
Query: 480 LENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSN 539
L + +D+S N L+ +L+ L+EL + N+ P ++ LE L L++N
Sbjct: 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158
Query: 540 KLSGSIPSDLQN-LQALRSLNLTFNNLEGVVPSEGIFRN--MSNVHLKGNPKLCLQLGCE 596
+L+ +P+ L N L+ L +L L N+L + +G F + + L GNP LC CE
Sbjct: 159 QLT-ELPAGLLNGLENLDTLLLQENSLYTI--PKGFFGSHLLPFAFLHGNPWLC---NCE 212
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Query: 168 RSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLV 227
+ +L+ +NLL+ S+A L+P NL +LT ++ GT+P + L
Sbjct: 31 KDTTILHLSENLLYTF---SLATLMPYTRLTQLNLDRCELTKLQVDGTLP--VLGTLDLS 85
Query: 228 HLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEG 287
H +L S L G+ TLP L FNR T G+L L +Q + + N L+
Sbjct: 86 HNQLQSLPLLGQ-------TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK- 137
Query: 288 TLPPGL 293
TLPPGL
Sbjct: 138 TLPPGL 143
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 133/300 (44%), Gaps = 44/300 (14%)
Query: 94 LSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMAN 153
L+ L I NN+L+ P + NL +L ++I NN Q ++ LT L L L N
Sbjct: 67 LNNLTQINFSNNQLTDITP--LKNLTKL--VDILMNNNQIADITPLANLTNLTGLTLFNN 122
Query: 154 KITGRVTDDQLRNLRSLQVLNFGKNLLWG-------------SIPPSIANLIPSDLSRLE 200
+IT D L+NL +L L N + S + +L P L+ L
Sbjct: 123 QITDI---DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKP--LANLT 177
Query: 201 NLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNR 260
L+ LD++ N+++ S + +T+L L +NQ+ P + L NL + N+
Sbjct: 178 TLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGI---LTNLDELSLNGNQ 232
Query: 261 FTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSF 320
K G+L +LTN+ + + +N + P L L L +G N+I S
Sbjct: 233 L--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQI---------SN 279
Query: 321 ITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIP-ASIGRLRSL 379
I+ L T L L L+ NQ E P I N N L+ L L N+I P +S+ +L+ L
Sbjct: 280 ISPLAGLTALTNLELNENQLEDISP--ISNLKN-LTYLTLYFNNISDISPVSSLTKLQRL 336
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 120/270 (44%), Gaps = 44/270 (16%)
Query: 91 IGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLN-ISFNNLQGELPVNISKLTELKMLD 149
+ NL+ L ++L +N +S +I L L L +SF N +L ++ LT L+ LD
Sbjct: 130 LKNLTNLNRLELSSNTIS-----DISALSGLTSLQQLSFGNQVTDLKP-LANLTTLERLD 183
Query: 150 LMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTI 209
+ +NK++ +L NL SL N I+++ P L L NL L L
Sbjct: 184 ISSNKVSDISVLAKLTNLESLIATN-----------NQISDITP--LGILTNLDELSLNG 230
Query: 210 NRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSL 269
N+L T+ ++T+L L LA+NQ+ P L L + N+ + P L
Sbjct: 231 NQLKDI--GTLASLTNLTDLDLANNQISNLAPL---SGLTKLTELKLGANQISNISP--L 283
Query: 270 HNLTNIQIIRMTHNLLEGTLP-PGLGNLPFLRTYNIGFNKI-----VSSGD--------D 315
LT + + + N LE P L NL +L Y FN I VSS +
Sbjct: 284 AGLTALTNLELNENQLEDISPISNLKNLTYLTLY---FNNISDISPVSSLTKLQRLFFYN 340
Query: 316 EGLSFITSLTNSTHLNYLALDGNQFEGKIP 345
+S ++SL N T++N+L+ NQ P
Sbjct: 341 NKVSDVSSLANLTNINWLSAGHNQISDLTP 370
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 161/383 (42%), Gaps = 49/383 (12%)
Query: 194 SDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLD 253
+DL ++ L+ L I + G + + +L + ++NQL P L L+D
Sbjct: 43 TDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITPLK---NLTKLVD 94
Query: 254 FIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSG 313
+ N+ P L NLTN+ + + +N + P L NL L + N I
Sbjct: 95 ILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTI---S 147
Query: 314 DDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASI 373
D LS +TSL L++ GNQ P + N + L +L + N + + +
Sbjct: 148 DISALSGLTSLQ---QLSF----GNQVTDLKP--LANLT-TLERLDISSNKVSDI--SVL 195
Query: 374 GRLRSLTLLDLSYNSISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLS 433
+L +L L + N IS P+ I + G +LA+L L +DL+
Sbjct: 196 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG----TLASLTNLTDLDLA 251
Query: 434 GNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSL 493
N+++ P+S L + L N+I+ + PL + L + ++L++N L
Sbjct: 252 NNQISNLAPLS--GLTKLTELKLGANQISN------ISPL----AGLTALTNLELNENQL 299
Query: 494 SGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQ 553
P + N K+L L + +N S P V+ L L+ L +NK+S S L NL
Sbjct: 300 EDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLT 353
Query: 554 ALRSLNLTFNNLEGVVPSEGIFR 576
+ L+ N + + P + R
Sbjct: 354 NINWLSAGHNQISDLTPLANLTR 376
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 27/138 (19%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE------ 745
E E L+ + H ++K+ + D +V E + G L D + G ++ +
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAED------YYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 746 --LDITSALDYLHNDCEVPVVHSDLKPGNILL---DEEMTAKVGDFGLARFLLERVDNQS 800
+ A+ YLH E ++H DLKP N+LL +E+ K+ DFG ++ L E
Sbjct: 119 YFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE------ 169
Query: 801 SISSTHVFMGSIGYVPPE 818
S G+ Y+ PE
Sbjct: 170 -TSLMRTLCGTPTYLAPE 186
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 73 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 132
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 133 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---- 181
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
V SS +T G++ Y+PPE
Sbjct: 182 --VHAPSSRRTT--LCGTLDYLPPE 202
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K +E VY L + +L I E +E
Sbjct: 71 MKCVNHKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 128
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 129 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K +E VY L + +L I E +E
Sbjct: 70 MKCVNHKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 127
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 128 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 63/145 (43%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 48 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 107
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 108 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---- 156
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
V SS T G++ Y+PPE
Sbjct: 157 --VHAPSSRRDT--LCGTLDYLPPE 177
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K +E VY L + +L I E +E
Sbjct: 76 MKCVNHKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 133
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 134 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 173
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 27/139 (19%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-HGERKNELDITS 750
E LR V H N++ L +N + L+ E +S G L D++ E +E + TS
Sbjct: 65 EVSILRQVLHHNVITLHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 751 -------ALDYLHNDCEVPVVHSDLKPGNI-LLDEEMT---AKVGDFGLARFLLERVDNQ 799
++YLH + H DLKP NI LLD+ + K+ DFGLA + + V+ +
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 800 SSISSTHVFMGSIGYVPPE 818
+ G+ +V PE
Sbjct: 177 N-------IFGTPEFVAPE 188
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 57/138 (41%), Gaps = 14/138 (10%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER---- 742
K + E L + H N++ L + M L LV E + L IH +R
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVIS 132
Query: 743 --KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQS 800
+ + L LH E VVH DL PGNILL + + DF LAR ++ +
Sbjct: 133 PQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR------EDTA 186
Query: 801 SISSTHVFMGSIGYVPPE 818
+ TH ++ Y PE
Sbjct: 187 DANKTH-YVTHRWYRAPE 203
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K +E VY L + +L I E +E
Sbjct: 77 MKCVNHKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 135 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 13/112 (11%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKN 744
K E ++ V H+N++ L+ + K +E VY L + +L I E +
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLXQVIQMELDH 125
Query: 745 E------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
E + + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 126 ERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 20/180 (11%)
Query: 420 SLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISR 479
+L +L Q++L ELT ++ + G L ++DLS+N+ L+ LP
Sbjct: 50 TLMPYTRLTQLNLDRCELT-KLQVD-GTLPVLGTLDLSHNQ---------LQSLPLLGQT 98
Query: 480 LENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSN 539
L + +D+S N L+ +L+ L+EL + N+ P ++ LE L L++N
Sbjct: 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158
Query: 540 KLSGSIPSDLQN-LQALRSLNLTFNNLEGVVPSEGIFRN--MSNVHLKGNPKLCLQLGCE 596
+L+ +P+ L N L+ L +L L N+L + +G F + + L GNP LC CE
Sbjct: 159 QLT-ELPAGLLNGLENLDTLLLQENSLYTI--PKGFFGSHLLPFAFLHGNPWLC---NCE 212
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 15/127 (11%)
Query: 168 RSLQVLNFGKNLLWGSIPPSIANLIP-SDLSRLENLKVLDLTINRLAGTVPSTIYNMTSL 226
+ +L+ +NLL+ S+A L+P + L++L NL +LT ++ GT+P + L
Sbjct: 31 KDTTILHLSENLLYTF---SLATLMPYTRLTQL-NLDRCELTKLQVDGTLP--VLGTLDL 84
Query: 227 VHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLE 286
H +L S L G+ TLP L FNR T G+L L +Q + + N L+
Sbjct: 85 SHNQLQSLPLLGQ-------TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK 137
Query: 287 GTLPPGL 293
TLPPGL
Sbjct: 138 -TLPPGL 143
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K +E VY L + +L I E +E
Sbjct: 78 MKCVNHKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 135
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 136 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 412 EIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILR 471
++P IP+S N IDLS N L SF NF L +DLS I + I
Sbjct: 25 KVPDDIPSSTKN------IDLSFNPLKILKSYSFSNFSELQWLDLSRCEI-----ETIED 73
Query: 472 PLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGL 531
+ L N++ L+ N + P S SLE L+ + + + +L L
Sbjct: 74 KAWHGLHHLSNLI---LTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITL 130
Query: 532 EVLDLSSNKL-SGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVHLKGNPKLC 590
+ L+++ N + S +P+ NL L ++L++N ++ + ++ F L+ NP++
Sbjct: 131 KKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQF-------LRENPQVN 183
Query: 591 LQL 593
L L
Sbjct: 184 LSL 186
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 27/138 (19%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE------ 745
E E L+ + H ++K+ + D +V E + G L D + G ++ +
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAED------YYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 746 --LDITSALDYLHNDCEVPVVHSDLKPGNILL---DEEMTAKVGDFGLARFLLERVDNQS 800
+ A+ YLH E ++H DLKP N+LL +E+ K+ DFG ++ L E
Sbjct: 119 YFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE------ 169
Query: 801 SISSTHVFMGSIGYVPPE 818
S G+ Y+ PE
Sbjct: 170 -TSLMRTLCGTPTYLAPE 186
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLS--NGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K +E VY + + +L I E +E
Sbjct: 115 MKCVNHKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 172
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 173 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD---- 747
E L V H N++K++ +N F LV E +G L + +R LD
Sbjct: 79 EIAILSRVEHANIIKVLDIF-----ENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLA 132
Query: 748 ------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSS 801
+ SA+ YL ++H D+K NI++ E+ T K+ DFG A + LER
Sbjct: 133 SYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAY-LERG----- 183
Query: 802 ISSTHVFMGSIGYVPPEYGLG 822
+ F G+I Y PE +G
Sbjct: 184 -KLFYTFCGTIEYCAPEVLMG 203
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 87/227 (38%), Gaps = 68/227 (29%)
Query: 669 IGSGSFGSVLHNERTGSWKS------------------------FIAECETLRNV-RHRN 703
+G G+FG V+ E G K ++E E ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD---------------- 747
++ L+ +C+ L ++ E+ S G+L +++ R ++
Sbjct: 103 IINLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 748 --------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799
+ ++YL + +H DL N+L+ E K+ DFGLAR ++N
Sbjct: 158 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNI 210
Query: 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
T + ++ PE L +R V T +S F ++ W
Sbjct: 211 DXXKKTTNGRLPVKWMAPE-ALFDR------VYTHQSDVWSFGVLMW 250
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K +E VY L + +L I E +E
Sbjct: 78 MKCVNHKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 135
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 136 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 27/138 (19%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE------ 745
E E L+ + H ++K+ + D +V E + G L D + G ++ +
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAED------YYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 746 --LDITSALDYLHNDCEVPVVHSDLKPGNILL---DEEMTAKVGDFGLARFLLERVDNQS 800
+ A+ YLH E ++H DLKP N+LL +E+ K+ DFG ++ L E
Sbjct: 119 YFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE------ 169
Query: 801 SISSTHVFMGSIGYVPPE 818
S G+ Y+ PE
Sbjct: 170 -TSLMRTLCGTPTYLAPE 186
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 20/180 (11%)
Query: 420 SLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISR 479
+L +L Q++L ELT ++ + G L ++DLS+N+ L+ LP
Sbjct: 50 TLMPYTRLTQLNLDRCELT-KLQVD-GTLPVLGTLDLSHNQ---------LQSLPLLGQT 98
Query: 480 LENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSN 539
L + +D+S N L+ +L+ L+EL + N+ P ++ LE L L++N
Sbjct: 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158
Query: 540 KLSGSIPSDLQN-LQALRSLNLTFNNLEGVVPSEGIFRN--MSNVHLKGNPKLCLQLGCE 596
+L+ +P+ L N L+ L +L L N+L + +G F + + L GNP LC CE
Sbjct: 159 QLT-ELPAGLLNGLENLDTLLLQENSLYTI--PKGFFGSHLLPFAFLHGNPWLC---NCE 212
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 15/127 (11%)
Query: 168 RSLQVLNFGKNLLWGSIPPSIANLIP-SDLSRLENLKVLDLTINRLAGTVPSTIYNMTSL 226
+ +L+ +NLL+ S+A L+P + L++L NL +LT ++ GT+P + L
Sbjct: 31 KDTTILHLSENLLYTF---SLATLMPYTRLTQL-NLDRCELTKLQVDGTLP--VLGTLDL 84
Query: 227 VHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLE 286
H +L S L G+ TLP L FNR T G+L L +Q + + N L+
Sbjct: 85 SHNQLQSLPLLGQ-------TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK 137
Query: 287 GTLPPGL 293
TLPPGL
Sbjct: 138 -TLPPGL 143
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Query: 743 KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSI 802
K + I AL++LH+ ++ V+H D+KP N+L++ K+ DFG++ +L++ V
Sbjct: 157 KIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSV------ 208
Query: 803 SSTHVFMGSIGYVPPE 818
+ + G Y+ PE
Sbjct: 209 -AKTIDAGCKPYMAPE 223
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 27/138 (19%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE------ 745
E E L+ + H ++K+ + D +V E + G L D + G ++ +
Sbjct: 204 EIEILKKLNHPCIIKIKNFFDAED------YYIVLELMEGGELFDKVVGNKRLKEATCKL 257
Query: 746 --LDITSALDYLHNDCEVPVVHSDLKPGNILL---DEEMTAKVGDFGLARFLLERVDNQS 800
+ A+ YLH E ++H DLKP N+LL +E+ K+ DFG ++ L E
Sbjct: 258 YFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE------ 308
Query: 801 SISSTHVFMGSIGYVPPE 818
S G+ Y+ PE
Sbjct: 309 -TSLMRTLCGTPTYLAPE 325
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K +E VY L + +L I E +E
Sbjct: 71 MKCVNHKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 128
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 129 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 87/227 (38%), Gaps = 68/227 (29%)
Query: 669 IGSGSFGSVLHNERTGSWKS------------------------FIAECETLRNV-RHRN 703
+G G+FG V+ E G K ++E E ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD---------------- 747
++ L+ +C+ L ++ E+ S G+L +++ R ++
Sbjct: 103 IINLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 748 --------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799
+ ++YL + +H DL N+L+ E K+ DFGLAR ++N
Sbjct: 158 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNI 210
Query: 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
T + ++ PE L +R V T +S F ++ W
Sbjct: 211 DXXKKTTNGRLPVKWMAPE-ALFDR------VYTHQSDVWSFGVLMW 250
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K +E VY L + +L I E +E
Sbjct: 77 MKCVNHKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 135 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 38/175 (21%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721
+F HEN+I ++ + +R S+++F E ++ + +L ++I++
Sbjct: 65 HFKHENII------TIFNIQRPDSFENF-NEVYIIQELMQTDLHRVIST----------- 106
Query: 722 LALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA 781
+ LS+ + +I+ + A+ LH V+H DLKP N+L++
Sbjct: 107 -----QMLSDDHIQYFIYQTLR-------AVKVLHGSN---VIHRDLKPSNLLINSNCDL 151
Query: 782 KVGDFGLARFLLERVDNQSSISSTHV----FMGSIGYVPPEYGL-GERPSTAGDV 831
KV DFGLAR + E + S + ++ + Y PE L + S A DV
Sbjct: 152 KVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDV 206
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K +E VY L + +L I E +E
Sbjct: 115 MKCVNHKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 172
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 173 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 27/138 (19%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE------ 745
E E L+ + H ++K+ + D +V E + G L D + G ++ +
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAED------YYIVLELMEGGELFDKVVGNKRLKEATCKL 117
Query: 746 --LDITSALDYLHNDCEVPVVHSDLKPGNILL---DEEMTAKVGDFGLARFLLERVDNQS 800
+ A+ YLH E ++H DLKP N+LL +E+ K+ DFG ++ L E
Sbjct: 118 YFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE------ 168
Query: 801 SISSTHVFMGSIGYVPPE 818
S G+ Y+ PE
Sbjct: 169 -TSLMRTLCGTPTYLAPE 185
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 35/160 (21%)
Query: 746 LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISST 805
L+I AL YLH+ + +V++DLKP NI+L EE K+ D G S I+S
Sbjct: 189 LEILPALSYLHS---IGLVYNDLKPENIMLTEEQL-KLIDLGAV----------SRINSF 234
Query: 806 HVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIV------KWVESNLPEN----- 854
G+ G+ PE + P+ A D+ T + ++V+ LPE+
Sbjct: 235 GYLYGTPGFQAPEI-VRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVD-GLPEDDPVLK 292
Query: 855 --------VLQVLDPELRQLMTSNESQTIQLHDCLITIIG 886
+ + +DP+ RQ T+ E + QL L ++
Sbjct: 293 TYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREVVA 332
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 720 EFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCEVP-------VVHSDLKPGN 772
+++ +V E N L W+ ++K +D Y N E +VHSDLKP N
Sbjct: 101 QYIYMVME-CGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 157
Query: 773 ILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
L+ + M K+ DFG+A + + D + + V G++ Y+PPE
Sbjct: 158 FLIVDGML-KLIDFGIANQM--QPDXXXVVKDSQV--GTVNYMPPE 198
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 27/138 (19%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE------ 745
E E L+ + H ++K+ + D +V E + G L D + G ++ +
Sbjct: 190 EIEILKKLNHPCIIKIKNFFDAED------YYIVLELMEGGELFDKVVGNKRLKEATCKL 243
Query: 746 --LDITSALDYLHNDCEVPVVHSDLKPGNILL---DEEMTAKVGDFGLARFLLERVDNQS 800
+ A+ YLH E ++H DLKP N+LL +E+ K+ DFG ++ L E
Sbjct: 244 YFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE------ 294
Query: 801 SISSTHVFMGSIGYVPPE 818
S G+ Y+ PE
Sbjct: 295 -TSLMRTLCGTPTYLAPE 311
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKN 744
K E ++ V H+N++ L+ + K++E VY L + +L I E +
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTP--QKSLEEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 745 E------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
E + + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 126 ERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|4ECN|A Chain A, Crystal Structure Of A Leucine-Rich Repeat Protein
(Bt_0210) From Bacteroides Thetaiotaomicron Vpi-5482 At
2.80 A Resolution
Length = 876
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 135/611 (22%), Positives = 225/611 (36%), Gaps = 130/611 (21%)
Query: 62 PGVICNNFGNRVIGLNLSSFGLEGTISPHIGNLSFLR--SIQLQNNKLSGNL-------- 111
PGV +N G RV GL+L+ FG +G + IG L+ L+ S + +SG L
Sbjct: 315 PGVDLDNNG-RVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTP 373
Query: 112 --PREIGNLFRLRV----------LNISFNNLQGELPVN-----ISKLTELKMLDLMANK 154
E + R LN+S + LQ + N I K + + + D
Sbjct: 374 DXSEERKHRIRXHYKKXFLDYDQRLNLS-DLLQDAINRNPEXKPIKKDSRISLKDTQIGN 432
Query: 155 ITGRVT--DDQLRNLRSLQVLNFGKN--------LLWGSIPPSIANLIPSDLSRLENLKV 204
+T R+T ++ L LQ++ F + + W A ++ NLK
Sbjct: 433 LTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLK- 491
Query: 205 LDLTINRLAG-----TVPSTIYNMTSLVHLRLASN------QLGGEIP--YDVRDTLPNL 251
DLT L +P +Y++ L L +A N QL + D DT P +
Sbjct: 492 -DLTDVELYNCPNXTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKI 550
Query: 252 LDFIYCFNRFTGKIPGS--LHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKI 309
F +N + P S L + ++ HN
Sbjct: 551 QIFYXGYNNLE-EFPASASLQKXVKLGLLDCVHN-------------------------- 583
Query: 310 VSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKI 369
+ + + + L L LD NQ E +IPE F++++ L G +H K
Sbjct: 584 -------KVRHLEAFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGL--GFSHNKLKY 633
Query: 370 PASIGRLRSLTL---LDLSYNSISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKK 426
+I +S+ + +D SYN I E I S + K
Sbjct: 634 IPNIFNAKSVYVXGSVDFSYNKIGSE---------------------GRNISCSXDDYKG 672
Query: 427 LNQ--IDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVV 484
+N + LS NE+ F + +I LSNN + +IP+ L+P +
Sbjct: 673 INASTVTLSYNEIQKFPTELFATGSPISTIILSNN-LXTSIPENSLKPKDGNYKNTYLLT 731
Query: 485 TIDLSDNSLSGNLPNSLKNCK--SLEELLMAYNQFSG--PIPNIVAELKGLEV---LDLS 537
TIDL N L+ +L + + L ++YN FS P ++LK + D
Sbjct: 732 TIDLRFNKLT-SLSDDFRATTLPYLSNXDVSYNCFSSFPTQPLNSSQLKAFGIRHQRDAE 790
Query: 538 SNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVHLKGNPKLCLQLGCEN 597
N++ P+ + +L L + N++ V E + + + + NP + + +
Sbjct: 791 GNRILRQWPTGITTCPSLIQLQIGSNDIRKV--DEKLTPQLYILDIADNPNISIDVTSVC 848
Query: 598 PRSHGSRLIIL 608
P ++L
Sbjct: 849 PYIEAGXYVLL 859
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K++E VY L + +L I E +E
Sbjct: 77 MKCVNHKNIIGLLNVFTP--QKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 135 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 67/171 (39%), Gaps = 57/171 (33%)
Query: 669 IGSGSFGSVLHNERTGSWKS------------------------FIAECETLRNV-RHRN 703
+G G+FG V+ E G K ++E E ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD---------------- 747
++ L+ +C+ L ++ E+ S G+L +++ R ++
Sbjct: 103 IITLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 748 --------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ ++YL + +H DL N+L+ E K+ DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKN 744
K E ++ V H+N++ L+ + K++E VY L + +L I E +
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTP--QKSLEEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 745 E------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
E + + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 126 ERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K++E VY L + +L I E +E
Sbjct: 77 MKCVNHKNIIGLLNVFTP--QKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 135 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 13/114 (11%)
Query: 465 IPKGILRPL-------------PEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELL 511
+PKGI R + P+E+S +++ IDLS+N +S S N L L+
Sbjct: 25 LPKGIPRDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLI 84
Query: 512 MAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNL 565
++YN+ P LK L +L L N +S +L AL L + N L
Sbjct: 85 LSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 64 VICNNFGNRV----IGLNLSSFGLEG---TISP-HIGNLSFLRSIQLQNNKLSGNLPREI 115
V C+N G +V I +++ L+G T+ P + N L I L NN++S +
Sbjct: 15 VRCSNKGLKVLPKGIPRDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSF 74
Query: 116 GNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNF 175
N+ +L L +S+N L+ P L L++L L N I+ V + +L +L L
Sbjct: 75 SNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAI 133
Query: 176 GKNLLW 181
G N L+
Sbjct: 134 GANPLY 139
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 417 IPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPK 467
+P L+N K L IDLS N ++ SF N LL++ LS NR+ P+
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPR 96
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 474 PEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEV 533
P E + L+ VV S+ L LP + + + EL + NQF+ +P ++ K L +
Sbjct: 5 PTECTCLDTVVRC--SNKGLKV-LPKGIP--RDVTELYLDGNQFTL-VPKELSNYKHLTL 58
Query: 534 LDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVP 570
+DLS+N++S N+ L +L L++N L + P
Sbjct: 59 IDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPP 95
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 4/135 (2%)
Query: 325 TNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDL 384
T T L+ + N+ +P+ I ++++LYL GN + +P + + LTL+DL
Sbjct: 6 TECTCLDTVVRCSNKGLKVLPKGI---PRDVTELYLDGNQ-FTLVPKELSNYKHLTLIDL 61
Query: 385 SYNSISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPIS 444
S N IS N + P + LK L + L GN+++ +
Sbjct: 62 SNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGA 121
Query: 445 FGNFQSLLSIDLSNN 459
F + +L + + N
Sbjct: 122 FNDLSALSHLAIGAN 136
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 191 LIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQL 236
L+P +LS ++L ++DL+ NR++ + NMT L+ L L+ N+L
Sbjct: 45 LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 67/171 (39%), Gaps = 57/171 (33%)
Query: 669 IGSGSFGSVLHNERTGSWKS------------------------FIAECETLRNV-RHRN 703
+G G+FG V+ E G K ++E E ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD---------------- 747
++ L+ +C+ L ++ E+ S G+L +++ R ++
Sbjct: 103 IIHLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 748 --------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ ++YL + +H DL N+L+ E K+ DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E++ G + + R I +YLH+
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 152
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 153 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 202
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 203 ILSKGYNKAVD 213
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 38/193 (19%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718
F +G+GSFG V+ H E + I + + + V+ + + + L + N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKV--VKLKQIEHTLNEKRILQAVN 99
Query: 719 MEFLA-LVYEFLSNGSLG---DWIHG-----------------ERKNELDITSALDYLHN 757
FL L Y F N +L +++ G R I +YLH+
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 758 DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPP 817
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ P
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAP 207
Query: 818 EYGLGERPSTAGD 830
E L + + A D
Sbjct: 208 EIILSKGYNKAVD 220
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 67/171 (39%), Gaps = 57/171 (33%)
Query: 669 IGSGSFGSVLHNERTGSWKS------------------------FIAECETLRNV-RHRN 703
+G G+FG V+ E G K ++E E ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD---------------- 747
++ L+ +C+ L ++ E+ S G+L +++ R ++
Sbjct: 103 IINLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 748 --------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ ++YL + +H DL N+L+ E K+ DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKN 744
K E ++ V H+N++ L+ + K++E VY L + +L I E +
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTP--QKSLEEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 745 E------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
E + + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 126 ERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E++ G + + R I +YLH+
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS-- 152
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 153 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 202
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 203 ILSKGYNKAVD 213
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 67/171 (39%), Gaps = 57/171 (33%)
Query: 669 IGSGSFGSVLHNERTGSWKS------------------------FIAECETLRNV-RHRN 703
+G G+FG V+ E G K ++E E ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD---------------- 747
++ L+ +C+ L ++ E+ S G+L +++ R ++
Sbjct: 103 IINLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 748 --------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ ++YL + +H DL N+L+ E K+ DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 25/151 (16%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ +++ DLKP N+L+D++ +V DFG A+
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 18/112 (16%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K++E VY L + +L I E +E
Sbjct: 77 MKCVNHKNIIGLLNVFTP--QKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR-----FLLE 794
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR F++E
Sbjct: 135 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMME 183
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLS--NGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K++E VY + + +L I E +E
Sbjct: 79 MKCVNHKNIIGLLNVFTP--QKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 136
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 137 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 176
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E++ G + + R I +YLH+
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 160
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 161 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 210
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 211 ILSKGYNKAVD 221
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 25/151 (16%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ +++ DLKP N+L+D++ +V DFG A+
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
A+D +H ++ VH D+KP NIL+D ++ DFG L+E QSS++ +G
Sbjct: 187 AIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA-----VG 238
Query: 811 SIGYVPPE 818
+ Y+ PE
Sbjct: 239 TPDYISPE 246
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 38/181 (20%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718
F +G+GSFG V+ H E + I + + + V+ + + + L + N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKV--VKLKQIEHTLNEKRILQAVN 99
Query: 719 MEFLA-LVYEFLSNGSLG---DWIHG-----------------ERKNELDITSALDYLHN 757
FL L Y F N +L +++ G R I +YLH+
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 758 DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPP 817
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ P
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAP 207
Query: 818 E 818
E
Sbjct: 208 E 208
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K++E VY L + +L I E +E
Sbjct: 77 MKCVNHKNIIGLLNVFTP--QKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 135 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 38/181 (20%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718
F +G+GSFG V+ H E + I + + + V+ + + + L + N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKV--VKLKQIEHTLNEKRILQAVN 99
Query: 719 MEFLA-LVYEFLSNGSLG---DWIHG-----------------ERKNELDITSALDYLHN 757
FL L Y F N +L +++ G R I +YLH+
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 758 DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPP 817
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ P
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAP 207
Query: 818 E 818
E
Sbjct: 208 E 208
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 34/179 (18%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
+ +++ DLKP N+++D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLIIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPE 208
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 12/71 (16%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I +YLH+ + +++ DLKP N+L+D++ KV DFG A+ RV + T
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGR-----TWX 198
Query: 808 FMGSIGYVPPE 818
G+ Y+ PE
Sbjct: 199 LCGTPEYLAPE 209
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K++E VY L + +L I E +E
Sbjct: 77 MKCVNHKNIIGLLNVFTP--QKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 135 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 57/237 (24%), Positives = 95/237 (40%), Gaps = 36/237 (15%)
Query: 357 KLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIXXXXXXXXXXXXXNEIPGG 416
+++L GN I AS R+LT+L L N ++ I
Sbjct: 36 RIFLHGNRISHVPAASFRACRNLTILWLHSNVLA---------------------RIDAA 74
Query: 417 IPNSLANLKKLNQIDLSGN-ELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPE 475
+ L L Q+DLS N +L P +F L ++ L + P G+ R L
Sbjct: 75 ---AFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGP-GLFRGLAA 130
Query: 476 EISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLD 535
+ + L DN+L ++ ++ +L L + N+ S L L+ L
Sbjct: 131 -------LQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183
Query: 536 LSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGI--FRNMSNVHLKGNPKLC 590
L N+++ P ++L L +L L NNL +P+E + R + + L NP +C
Sbjct: 184 LHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA-LPTEALAPLRALQYLRLNDNPWVC 239
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 18/112 (16%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K++E VY L + +L I E +E
Sbjct: 77 MKCVNHKNIIGLLNVFTP--QKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR-----FLLE 794
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR F++E
Sbjct: 135 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMME 183
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 57/237 (24%), Positives = 95/237 (40%), Gaps = 36/237 (15%)
Query: 357 KLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIXXXXXXXXXXXXXNEIPGG 416
+++L GN I AS R+LT+L L N ++ I
Sbjct: 35 RIFLHGNRISHVPAASFRACRNLTILWLHSNVLA---------------------RIDAA 73
Query: 417 IPNSLANLKKLNQIDLSGN-ELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPE 475
+ L L Q+DLS N +L P +F L ++ L + P G+ R L
Sbjct: 74 ---AFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGP-GLFRGLAA 129
Query: 476 EISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLD 535
+ + L DN+L ++ ++ +L L + N+ S L L+ L
Sbjct: 130 -------LQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 182
Query: 536 LSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGI--FRNMSNVHLKGNPKLC 590
L N+++ P ++L L +L L NNL +P+E + R + + L NP +C
Sbjct: 183 LHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA-LPTEALAPLRALQYLRLNDNPWVC 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E++ G + + R I +YLH+
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 160
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 161 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 210
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 211 ILSKGYNKAVD 221
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K++E VY L + +L I E +E
Sbjct: 71 MKCVNHKNIIGLLNVFTP--QKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 128
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 129 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 34/179 (18%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 63 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E++ G + + R I +YLH+
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 180
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 181 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPE 229
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K++E VY L + +L I E +E
Sbjct: 78 MKCVNHKNIIGLLNVFTP--QKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 135
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 136 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKN 744
K E ++ V H+N++ L+ + K++E VY L + +L I E +
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTP--QKSLEEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 745 E------LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
E + + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 126 ERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E++ G + + R I +YLH+
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 160
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 161 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 210
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 211 ILSKGYNKAVD 221
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K++E VY L + +L I E +E
Sbjct: 82 MKCVNHKNIIGLLNVFTP--QKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 139
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 140 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 179
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 20/180 (11%)
Query: 420 SLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISR 479
+L +L Q++L ELT ++ + G L ++DLS+N+ L+ LP
Sbjct: 50 TLMPYTRLTQLNLDRAELT-KLQVD-GTLPVLGTLDLSHNQ---------LQSLPLLGQT 98
Query: 480 LENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSN 539
L + +D+S N L+ +L+ L+EL + N+ P ++ LE L L++N
Sbjct: 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158
Query: 540 KLSGSIPSDLQN-LQALRSLNLTFNNLEGVVPSEGIFRN--MSNVHLKGNPKLCLQLGCE 596
L+ +P+ L N L+ L +L L N+L + +G F + + L GNP LC CE
Sbjct: 159 NLT-ELPAGLLNGLENLDTLLLQENSLYTI--PKGFFGSHLLPFAFLHGNPWLC---NCE 212
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 15/127 (11%)
Query: 168 RSLQVLNFGKNLLWGSIPPSIANLIP-SDLSRLENLKVLDLTINRLAGTVPSTIYNMTSL 226
+ +L+ +NLL+ S+A L+P + L++L NL +LT ++ GT+P + L
Sbjct: 31 KDTTILHLSENLLYTF---SLATLMPYTRLTQL-NLDRAELTKLQVDGTLP--VLGTLDL 84
Query: 227 VHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLE 286
H +L S L G+ TLP L FNR T G+L L +Q + + N L+
Sbjct: 85 SHNQLQSLPLLGQ-------TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK 137
Query: 287 GTLPPGL 293
TLPPGL
Sbjct: 138 -TLPPGL 143
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 86/227 (37%), Gaps = 68/227 (29%)
Query: 669 IGSGSFGSVLHNERTGSWKS------------------------FIAECETLRNV-RHRN 703
+G G FG V+ E G K ++E E ++ + +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD---------------- 747
++ L+ +C+ L ++ E+ S G+L +++ R ++
Sbjct: 149 IINLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 748 --------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799
+ ++YL + +H DL N+L+ E K+ DFGLAR ++N
Sbjct: 204 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNI 256
Query: 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
T + ++ PE L +R V T +S F ++ W
Sbjct: 257 DYYKKTTNGRLPVKWMAPE-ALFDR------VYTHQSDVWSFGVLMW 296
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIH-----GERKNELDITSALDYLHN 757
N++KLI + SK ALV+E+++N R ++ ALDY H+
Sbjct: 99 NIIKLIDTVKDPVSKTP---ALVFEYINNTDFKQLYQILTDFDIRFYMYELLKALDYCHS 155
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
++H D+KP N+++D + ++ D+GLA F
Sbjct: 156 KG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEF 187
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 34/179 (18%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+ G + + R I +YLH+
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 160
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
+ +++ DLKP N+++D++ KV DFG A+ RV + T G+ Y+ PE
Sbjct: 161 -LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGR-----TWXLCGTPEYLAPE 209
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF--LSNGSLGDWIHGERKNE------LD 747
++ V H+N++ L+ + K++E VY L + +L I E +E
Sbjct: 77 MKCVNHKNIIGLLNVFTP--QKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ + +LH+ ++H DLKP NI++ + T K+ DFGLAR
Sbjct: 135 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+++D++ KV DFGLA+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLMIDQQGYIKVTDFGLAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 104/248 (41%), Gaps = 58/248 (23%)
Query: 97 LRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGEL-PVNISKLTELKMLDLMANKI 155
L+ + L NK++ L L+VLN+S+ NL GEL N L ++ +DL N I
Sbjct: 292 LKVLNLAYNKINKIADEAFYGLDNLQVLNLSY-NLLGELYSSNFYGLPKVAYIDLQKNHI 350
Query: 156 TGRVTDDQLRNLRSLQVLNFGKNLLWG-----SIP------------PSI---ANLIPSD 195
+ D + L LQ L+ N L SIP P I ANLI
Sbjct: 351 -AIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLS 409
Query: 196 LSRLEN------------LKVLDLTINRLAGTV-PSTIYNMTSLVHLRLASNQLGGEIPY 242
+RLEN L++L L NR + T SL L L N L ++ +
Sbjct: 410 ENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENML--QLAW 467
Query: 243 DVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPG-LGNLPFLRT 301
+ C++ F G L+++Q++ + HN L +LPPG +L LR
Sbjct: 468 ETE----------LCWDVFEG--------LSHLQVLYLNHNYL-NSLPPGVFSHLTALRG 508
Query: 302 YNIGFNKI 309
++ N++
Sbjct: 509 LSLNSNRL 516
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 25/51 (49%)
Query: 528 LKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNM 578
L L +LDL S+K+ P Q L L L L F L V +G FRN+
Sbjct: 72 LPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNL 122
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 125/308 (40%), Gaps = 43/308 (13%)
Query: 244 VRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYN 303
V +TL +L +N+ + + L N+Q++ +++NLL LP + +
Sbjct: 285 VFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYID 344
Query: 304 IGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESI--GNFSNELSKLYLG 361
+ N I + D+ F+ L + L AL F IP+ GN L K+ L
Sbjct: 345 LQKNHI-AIIQDQTFKFLEKL-QTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLT 402
Query: 362 GNHIYGKIPASIGRLRSLTLLDLSYNSISGEIP-IEIXXXXXXXXXXXXXNEIPGGIPNS 420
N I+ S RL +L +L +P ++I ++ P P+
Sbjct: 403 ANLIH----LSENRLENLDILYFLL-----RVPHLQILILNQNRFSSCSGDQTPSENPS- 452
Query: 421 LANLKKLNQIDLSGN--ELTGEIPISFGNFQSLLSID---LSNNRINGNIPKGILRPLP- 474
L Q+ L N +L E + + F+ L + L++N +N +P G+ L
Sbjct: 453 ------LEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNS-LPPGVFSHLTA 505
Query: 475 -EEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEV 533
+S N +T+ LS N L N LE L ++ NQ P P++ L V
Sbjct: 506 LRGLSLNSNRLTV-LSHNDLPAN----------LEILDISRNQLLAPNPDVFV---SLSV 551
Query: 534 LDLSSNKL 541
LD++ NK
Sbjct: 552 LDITHNKF 559
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIH-----GERKNELDITSALDYLHN 757
N++KLI + SK ALV+E+++N R ++ ALDY H+
Sbjct: 94 NIIKLIDTVKDPVSKTP---ALVFEYINNTDFKQLYQILTDFDIRFYMYELLKALDYCHS 150
Query: 758 DCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
++H D+KP N+++D + ++ D+GLA F
Sbjct: 151 KG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEF 182
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 39.7 bits (91), Expect = 0.009, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 50 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 109
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 110 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV--- 159
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
+ S G++ Y+PPE
Sbjct: 160 -----HAPSSRRAALCGTLDYLPPE 179
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 21/139 (15%)
Query: 669 IGSG---SFGSVLHNERTGSWKSFIAECETLRNVR-HRNLVKLITSCS----SLDSKNME 720
+GSG + +L NE + ++ I E ++ + H N+V+ ++ S D+ E
Sbjct: 50 VGSGREYALKRLLSNEEEKN-RAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE 108
Query: 721 FLALVYEFLSNGSLGDWIHG-ERKNELDITSALDYLHNDCEV---------PVVHSDLKP 770
FL L L G L +++ E + L + L + C P++H DLK
Sbjct: 109 FLLLTE--LCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKV 166
Query: 771 GNILLDEEMTAKVGDFGLA 789
N+LL + T K+ DFG A
Sbjct: 167 ENLLLSNQGTIKLCDFGSA 185
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 39.7 bits (91), Expect = 0.009, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 107 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV--- 156
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
+ S G++ Y+PPE
Sbjct: 157 -----HAPSSRRAALCGTLDYLPPE 176
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 20/180 (11%)
Query: 420 SLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISR 479
+L +L Q++L ELT ++ + G L ++DLS+N+ L+ LP
Sbjct: 50 TLMPYTRLTQLNLDRCELT-KLQVD-GTLPVLGTLDLSHNQ---------LQSLPLLGQT 98
Query: 480 LENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSN 539
L + +D+S N L+ +L+ L+EL + N+ P ++ LE L L++N
Sbjct: 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158
Query: 540 KLSGSIPSDLQN-LQALRSLNLTFNNLEGVVPSEGIFRN--MSNVHLKGNPKLCLQLGCE 596
L+ +P+ L N L+ L +L L N+L + +G F + + L GNP LC CE
Sbjct: 159 DLT-ELPAGLLNGLENLDTLLLQENSLYTI--PKGFFGSHLLPFAFLHGNPWLC---NCE 212
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 15/127 (11%)
Query: 168 RSLQVLNFGKNLLWGSIPPSIANLIP-SDLSRLENLKVLDLTINRLAGTVPSTIYNMTSL 226
+ +L+ +NLL+ S+A L+P + L++L NL +LT ++ GT+P + L
Sbjct: 31 KDTTILHLSENLLYTF---SLATLMPYTRLTQL-NLDRCELTKLQVDGTLP--VLGTLDL 84
Query: 227 VHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLE 286
H +L S L G+ TLP L FNR T G+L L +Q + + N L+
Sbjct: 85 SHNQLQSLPLLGQ-------TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK 137
Query: 287 GTLPPGL 293
TLPPGL
Sbjct: 138 -TLPPGL 143
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 20/180 (11%)
Query: 420 SLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISR 479
+L +L Q++L ELT ++ + G L ++DLS+N+ L+ LP
Sbjct: 50 TLMPYTRLTQLNLDRAELT-KLQVD-GTLPVLGTLDLSHNQ---------LQSLPLLGQT 98
Query: 480 LENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSN 539
L + +D+S N L+ +L+ L+EL + N+ P ++ LE L L++N
Sbjct: 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158
Query: 540 KLSGSIPSDLQN-LQALRSLNLTFNNLEGVVPSEGIFRN--MSNVHLKGNPKLCLQLGCE 596
L+ +P+ L N L+ L +L L N+L + +G F + + L GNP LC CE
Sbjct: 159 NLT-ELPAGLLNGLENLDTLLLQENSLYTI--PKGFFGSHLLPFAFLHGNPWLC---NCE 212
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 15/127 (11%)
Query: 168 RSLQVLNFGKNLLWGSIPPSIANLIP-SDLSRLENLKVLDLTINRLAGTVPSTIYNMTSL 226
+ +L+ +NLL+ S+A L+P + L++L NL +LT ++ GT+P + L
Sbjct: 31 KDTTILHLSENLLYTF---SLATLMPYTRLTQL-NLDRAELTKLQVDGTLP--VLGTLDL 84
Query: 227 VHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLE 286
H +L S L G+ TLP L FNR T G+L L +Q + + N L+
Sbjct: 85 SHNQLQSLPLLGQ-------TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK 137
Query: 287 GTLPPGL 293
TLPPGL
Sbjct: 138 -TLPPGL 143
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 21/118 (17%)
Query: 690 IAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI------HGERK 743
+ E E L+ + H+N+VKL +++ L+ EF GSL + +G +
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHK---VLIMEFCPCGSLYTVLEEPSNAYGLPE 111
Query: 744 NEL-----DITSALDYLHNDCEVPVVHSDLKPGNILL----DEEMTAKVGDFGLARFL 792
+E D+ +++L E +VH ++KPGNI+ D + K+ DFG AR L
Sbjct: 112 SEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 39.3 bits (90), Expect = 0.009, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 49 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 108
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 109 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV--- 158
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
+ S G++ Y+PPE
Sbjct: 159 -----HAPSSRRXXLCGTLDYLPPE 178
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 118/280 (42%), Gaps = 64/280 (22%)
Query: 351 FSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIXXXXXXXXXXXXX 410
+++ + KLY+G N I P + LT+L L N +S
Sbjct: 91 YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS------------------- 131
Query: 411 NEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRI--------- 461
+P GI N KL + +S N L +F SL ++ LS+NR+
Sbjct: 132 --LPRGI---FHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIP 186
Query: 462 ---NGNIPKGILRPLPEEISRLENVVTIDLSDNSLS-----------------GNLPNS- 500
+ N+ +L L I+ V +D S NS++ NL ++
Sbjct: 187 SLFHANVSYNLLSTLAIPIA----VEELDASHNSINVVRGPVNVELTILKLQHNNLTDTA 242
Query: 501 -LKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDL--QNLQALRS 557
L N L E+ ++YN+ + + +++ LE L +S+N+L + +L Q + L+
Sbjct: 243 WLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRL---VALNLYGQPIPTLKV 299
Query: 558 LNLTFNNLEGVVPSEGIFRNMSNVHLKGNPKLCLQLGCEN 597
L+L+ N+L V ++ F + N++L N + L+L +
Sbjct: 300 LDLSHNHLLHVERNQPQFDRLENLYLDHNSIVTLKLSTHH 339
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 39.3 bits (90), Expect = 0.009, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 107 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV--- 156
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
+ S G++ Y+PPE
Sbjct: 157 -----HAPSSRRXXLCGTLDYLPPE 176
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 39.3 bits (90), Expect = 0.009, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 50 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 109
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 110 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV--- 159
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
+ S G++ Y+PPE
Sbjct: 160 -----HAPSSRRXXLCGTLDYLPPE 179
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 34/186 (18%)
Query: 657 RRATGNFSHENLIGSGSFGSVLHNERTGSWKSFIA--------------ECETLRNVRHR 702
R +F+ ++G GSFG V+ +ER G+ + + EC T+ R
Sbjct: 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVEC-TMVEKRVL 395
Query: 703 NLVKLITSCSSLDS--KNMEFLALVYEFLSNGSLGDWIH--GERKN------ELDITSAL 752
L + L S + M+ L V E+++ G L I G K +I L
Sbjct: 396 ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGL 455
Query: 753 DYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSI 812
+L + +++ DLK N++LD E K+ DFG+ + +N +T F G+
Sbjct: 456 FFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK------ENIWDGVTTKXFCGTP 506
Query: 813 GYVPPE 818
Y+ PE
Sbjct: 507 DYIAPE 512
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 39.3 bits (90), Expect = 0.009, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
++ +AL Y H+ V+H D+KP N+LL K+ DFG + + S
Sbjct: 121 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV--------HAPSSRRX 169
Query: 807 VFMGSIGYVPPE 818
G++ Y+PPE
Sbjct: 170 XLXGTLDYLPPE 181
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR D+ ++
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE--- 186
Query: 808 FMGSIGYVPPEYGLGERPST 827
++ + Y PE L + T
Sbjct: 187 YVATRWYRAPEIMLNSKGYT 206
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 87
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E++ G + + R I +YLH+
Sbjct: 88 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 145
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 146 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWTLCGTPEYLAPEI 195
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 196 ILSKGYNKAVD 206
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 33/140 (23%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721
+F HEN+I ++ + +R S+++F E ++ + +L ++I++
Sbjct: 65 HFKHENII------TIFNIQRPDSFENF-NEVYIIQELMQTDLHRVIST----------- 106
Query: 722 LALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA 781
+ LS+ + +I+ + A+ LH V+H DLKP N+L++
Sbjct: 107 -----QMLSDDHIQYFIYQTLR-------AVKVLHGSN---VIHRDLKPSNLLINSNCDL 151
Query: 782 KVGDFGLARFLLERVDNQSS 801
KV DFGLAR + E + S
Sbjct: 152 KVCDFGLARIIDESAADNSE 171
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 36/157 (22%)
Query: 663 FSHENLIGSGSFGSVLHNERTGSW----------------KSFIAECETLRNVRHRNLVK 706
++ EN IG GS+G V + G+ F E E ++++ H N+++
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 707 LITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHND 758
L + D+ + + LV E + G L + + +R + D+ SA+ Y H
Sbjct: 71 LYETFE--DNTD---IYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH-- 123
Query: 759 CEVPVVHSDLKPGNILL---DEEMTAKVGDFGL-ARF 791
++ V H DLKP N L + K+ DFGL ARF
Sbjct: 124 -KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 36/157 (22%)
Query: 663 FSHENLIGSGSFGSVLHNERTGSW----------------KSFIAECETLRNVRHRNLVK 706
++ EN IG GS+G V + G+ F E E ++++ H N+++
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 707 LITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHND 758
L + D+ + + LV E + G L + + +R + D+ SA+ Y H
Sbjct: 88 LYETFE--DNTD---IYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH-- 140
Query: 759 CEVPVVHSDLKPGNILL---DEEMTAKVGDFGL-ARF 791
++ V H DLKP N L + K+ DFGL ARF
Sbjct: 141 -KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 176
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR D+ ++
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE--- 190
Query: 808 FMGSIGYVPPEYGLGERPST 827
++ + Y PE L + T
Sbjct: 191 YVATRWYRAPEIMLNSKGYT 210
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR D+ ++
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE--- 186
Query: 808 FMGSIGYVPPEYGLGERPST 827
++ + Y PE L + T
Sbjct: 187 YVATRWYRAPEIMLNSKGYT 206
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR D+ ++
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE--- 188
Query: 808 FMGSIGYVPPEYGLGERPST 827
++ + Y PE L + T
Sbjct: 189 YVATRWYRAPEIMLNSKGYT 208
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 20/106 (18%)
Query: 724 LVYEFLSNGSLGDWIHGERK-NELD-------ITSALDYLHNDCEVPVVHSDLKPGNILL 775
LV E L+ G L + I ++ +E + + SA+ ++H+ V VVH DLKP N+L
Sbjct: 83 LVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLF 139
Query: 776 DEE---MTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
+E + K+ DFG AR L+ DNQ T F ++ Y PE
Sbjct: 140 TDENDNLEIKIIDFGFAR--LKPPDNQP--LKTPCF--TLHYAAPE 179
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 20/180 (11%)
Query: 420 SLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISR 479
+L +L Q++L ELT ++ + G L ++DLS+N+ L+ LP
Sbjct: 50 TLMPYTRLTQLNLDRAELT-KLQVD-GTLPVLGTLDLSHNQ---------LQSLPLLGQT 98
Query: 480 LENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSN 539
L + +D+S N L+ +L+ L+EL + N+ P ++ LE L L++N
Sbjct: 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158
Query: 540 KLSGSIPSDLQN-LQALRSLNLTFNNLEGVVPSEGIFRN--MSNVHLKGNPKLCLQLGCE 596
L+ +P+ L N L+ L +L L N+L + +G F + + L GNP LC CE
Sbjct: 159 NLT-ELPAGLLNGLENLDTLLLQENSLYTI--PKGFFGSHLLPFAFLHGNPWLC---NCE 212
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 15/127 (11%)
Query: 168 RSLQVLNFGKNLLWGSIPPSIANLIP-SDLSRLENLKVLDLTINRLAGTVPSTIYNMTSL 226
+ +L+ +NLL+ S+A L+P + L++L NL +LT ++ GT+P + L
Sbjct: 31 KDTTILHLSENLLYTF---SLATLMPYTRLTQL-NLDRAELTKLQVDGTLP--VLGTLDL 84
Query: 227 VHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLE 286
H +L S L G+ TLP L FNR T G+L L +Q + + N L+
Sbjct: 85 SHNQLQSLPLLGQ-------TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK 137
Query: 287 GTLPPGL 293
TLPPGL
Sbjct: 138 -TLPPGL 143
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 86/227 (37%), Gaps = 68/227 (29%)
Query: 669 IGSGSFGSVLHNERTGSWKS------------------------FIAECETLRNV-RHRN 703
+G G FG V+ E G K ++E E ++ + +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD---------------- 747
++ L+ +C+ L ++ E+ S G+L +++ R ++
Sbjct: 95 IINLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 748 --------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799
+ ++YL + +H DL N+L+ E K+ DFGLAR ++N
Sbjct: 150 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNI 202
Query: 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
T + ++ PE L +R V T +S F ++ W
Sbjct: 203 DYYKKTTNGRLPVKWMAPE-ALFDR------VYTHQSDVWSFGVLMW 242
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 86/227 (37%), Gaps = 68/227 (29%)
Query: 669 IGSGSFGSVLHNERTGSWKS------------------------FIAECETLRNV-RHRN 703
+G G FG V+ E G K ++E E ++ + +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD---------------- 747
++ L+ +C+ L ++ E+ S G+L +++ R ++
Sbjct: 92 IINLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 748 --------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799
+ ++YL + +H DL N+L+ E K+ DFGLAR ++N
Sbjct: 147 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNI 199
Query: 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
T + ++ PE L +R V T +S F ++ W
Sbjct: 200 DYYKKTTNGRLPVKWMAPE-ALFDR------VYTHQSDVWSFGVLMW 239
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 86/227 (37%), Gaps = 68/227 (29%)
Query: 669 IGSGSFGSVLHNERTGSWKS------------------------FIAECETLRNV-RHRN 703
+G G FG V+ E G K ++E E ++ + +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD---------------- 747
++ L+ +C+ L ++ E+ S G+L +++ R ++
Sbjct: 90 IINLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 748 --------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799
+ ++YL + +H DL N+L+ E K+ DFGLAR ++N
Sbjct: 145 DLVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLAR----DINNI 197
Query: 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
T + ++ PE L +R V T +S F ++ W
Sbjct: 198 DYYKKTTNGRLPVKWMAPE-ALFDR------VYTHQSDVWSFGVLMW 237
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR D+ ++
Sbjct: 131 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE--- 184
Query: 808 FMGSIGYVPPEYGLGERPST 827
++ + Y PE L + T
Sbjct: 185 YVATRWYRAPEIMLNSKGYT 204
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR D+ ++
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTE--- 186
Query: 808 FMGSIGYVPPEYGLGERPST 827
++ + Y PE L + T
Sbjct: 187 YVATRWYRAPEIMLNSKGYT 206
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
+I + YL+ + VH DL N ++ E+ T K+GDFG+ R + E + +
Sbjct: 137 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE---------TDY 184
Query: 807 VFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE--LR 864
G G +P + E S V T+ S F +V W + L E Q L E LR
Sbjct: 185 YRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 242
Query: 865 QLM 867
+M
Sbjct: 243 FVM 245
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
+I + YL+ + VH DL N ++ E+ T K+GDFG+ R + E + +
Sbjct: 136 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE---------TDY 183
Query: 807 VFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE--LR 864
G G +P + E S V T+ S F +V W + L E Q L E LR
Sbjct: 184 YRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 241
Query: 865 QLM 867
+M
Sbjct: 242 FVM 244
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 69/171 (40%), Gaps = 19/171 (11%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
+I + YL+ + VH DL N ++ E+ T K+GDFG+ R + E + +
Sbjct: 139 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE---------TDY 186
Query: 807 VFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE--LR 864
G G +P + E S V T+ S F +V W + L E Q L E LR
Sbjct: 187 YRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 244
Query: 865 QLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQE 915
+M E + D ++ + C +P R E + +K E
Sbjct: 245 FVM---EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 292
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
+I + YL+ + VH DL N ++ E+ T K+GDFG+ R + E + +
Sbjct: 139 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE---------TDY 186
Query: 807 VFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE--LR 864
G G +P + E S V T+ S F +V W + L E Q L E LR
Sbjct: 187 YRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 244
Query: 865 QLM 867
+M
Sbjct: 245 FVM 247
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
+I + YL+ + VH DL N ++ E+ T K+GDFG+ R + E + +
Sbjct: 140 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE---------TDY 187
Query: 807 VFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE--LR 864
G G +P + E S V T+ S F +V W + L E Q L E LR
Sbjct: 188 YRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 245
Query: 865 QLM 867
+M
Sbjct: 246 FVM 248
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 33/128 (25%)
Query: 688 SFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
I+E E ++ + +H+N++ L+ +C+ L ++ E+ S G+L +++ L
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGP-----LYVIVEYASKGNLREYLQAREPPGL 133
Query: 747 D------------------------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAK 782
+ + ++YL + +H DL N+L+ E+ K
Sbjct: 134 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMK 190
Query: 783 VGDFGLAR 790
+ DFGLAR
Sbjct: 191 IADFGLAR 198
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E++ G + + R I +YLH+
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 160
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 161 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWTLCGTPEYLAPEI 210
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 211 ILSKGYNKAVD 221
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR D+ ++
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE--- 188
Query: 808 FMGSIGYVPPEYGLGERPST 827
++ + Y PE L + T
Sbjct: 189 YVATRWYRAPEIMLNSKGYT 208
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR D+ ++
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE--- 190
Query: 808 FMGSIGYVPPEYGLGERPST 827
++ + Y PE L + T
Sbjct: 191 YVATRWYRAPEIMLNSKGYT 210
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 48 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 107
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 108 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---- 156
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
+ S G++ Y+PPE
Sbjct: 157 ----CHAPSSRRTTLSGTLDYLPPE 177
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 20/180 (11%)
Query: 420 SLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISR 479
+L +L Q++L ELT ++ + G L ++DLS+N+ L+ LP
Sbjct: 50 TLMPYTRLTQLNLDRCELT-KLQVD-GTLPVLGTLDLSHNQ---------LQSLPLLGQT 98
Query: 480 LENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSN 539
L + +D+S N L+ +L+ L+EL + N+ P ++ LE L L++N
Sbjct: 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158
Query: 540 KLSGSIPSDLQN-LQALRSLNLTFNNLEGVVPSEGIFRN--MSNVHLKGNPKLCLQLGCE 596
L+ +P+ L N L+ L +L L N+L + +G F + + L GNP LC CE
Sbjct: 159 NLT-ELPAGLLNGLENLDTLLLQENSLYTI--PKGFFGSHLLPFAFLHGNPWLC---NCE 212
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Query: 168 RSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLV 227
+ +L+ +NLL+ S+A L+P NL +LT ++ GT+P + L
Sbjct: 31 KDTTILHLSENLLYTF---SLATLMPYTRLTQLNLDRCELTKLQVDGTLP--VLGTLDLS 85
Query: 228 HLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEG 287
H +L S L G+ TLP L FNR T G+L L +Q + + N L+
Sbjct: 86 HNQLQSLPLLGQ-------TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK- 137
Query: 288 TLPPGL 293
TLPPGL
Sbjct: 138 TLPPGL 143
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR D+ ++
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE--- 186
Query: 808 FMGSIGYVPPEYGLGERPST 827
++ + Y PE L + T
Sbjct: 187 YVATRWYRAPEIMLNSKGYT 206
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR D+ ++
Sbjct: 138 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE--- 191
Query: 808 FMGSIGYVPPEYGLGERPST 827
++ + Y PE L + T
Sbjct: 192 YVATRWYRAPEIMLNSKGYT 211
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR D+ ++
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE--- 190
Query: 808 FMGSIGYVPPEYGLGERPST 827
++ + Y PE L + T
Sbjct: 191 YVATRWYRAPEIMLNSKGYT 210
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR D+ ++
Sbjct: 139 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE--- 192
Query: 808 FMGSIGYVPPEYGLGERPST 827
++ + Y PE L + T
Sbjct: 193 YVATRWYRAPEIMLNSKGYT 212
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR D+ ++
Sbjct: 130 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE--- 183
Query: 808 FMGSIGYVPPEYGLGERPST 827
++ + Y PE L + T
Sbjct: 184 YVATRWYRAPEIMLNSKGYT 203
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR D+ ++
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE--- 190
Query: 808 FMGSIGYVPPEYGLGERPST 827
++ + Y PE L + T
Sbjct: 191 YVATRWYRAPEIMLNSKGYT 210
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR D+ ++
Sbjct: 153 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE--- 206
Query: 808 FMGSIGYVPPEYGLGERPST 827
++ + Y PE L + T
Sbjct: 207 YVATRWYRAPEIMLNSKGYT 226
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 743 KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSI 802
K + + L YL ++ +H D+KP NIL++ K+ DFG++ L++ + N+
Sbjct: 111 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANE--- 165
Query: 803 SSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
F+G+ Y+ PE G S D+
Sbjct: 166 -----FVGTRSYMSPERLQGTHYSVQSDI 189
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR D+ ++
Sbjct: 131 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE--- 184
Query: 808 FMGSIGYVPPEYGLGERPST 827
++ + Y PE L + T
Sbjct: 185 YVATRWYRAPEIMLNSKGYT 204
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR D+ ++
Sbjct: 141 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE--- 194
Query: 808 FMGSIGYVPPEYGLGERPST 827
++ + Y PE L + T
Sbjct: 195 YVATRWYRAPEIMLNSKGYT 214
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR D+ ++
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE--- 186
Query: 808 FMGSIGYVPPEYGLGERPST 827
++ + Y PE L + T
Sbjct: 187 YVATRWYRAPEIMLNSKGYT 206
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR D+ ++
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE--- 190
Query: 808 FMGSIGYVPPEYGLGERPST 827
++ + Y PE L + T
Sbjct: 191 YVATRWYRAPEIMLNSKGYT 210
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 34/179 (18%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+ G + + R I +YLH+
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 160
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
+ +++ DLKP N+++D++ KV DFG A+ RV + T G+ Y+ PE
Sbjct: 161 -LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGR-----TWXLCGTPEYLAPE 209
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 34/179 (18%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+ G + + R I +YLH+
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS-- 160
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
+ +++ DLKP N+++D++ KV DFG A+ RV + T G+ Y+ PE
Sbjct: 161 -LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGR-----TWXLCGTPEYLAPE 209
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 34/179 (18%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+ G + + R I +YLH+
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 160
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
+ +++ DLKP N+++D++ KV DFG A+ RV + T G+ Y+ PE
Sbjct: 161 -LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGR-----TWXLCGTPEYLAPE 209
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR D+ ++
Sbjct: 153 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE--- 206
Query: 808 FMGSIGYVPPEYGLGERPST 827
++ + Y PE L + T
Sbjct: 207 YVATRWYRAPEIMLNSKGYT 226
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
+I + YL+ + VH DL N ++ E+ T K+GDFG+ R + E + +
Sbjct: 133 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE---------TDY 180
Query: 807 VFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE--LR 864
G G +P + E S V T+ S F +V W + L E Q L E LR
Sbjct: 181 YRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 238
Query: 865 QLM 867
+M
Sbjct: 239 FVM 241
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 107 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV--- 156
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
+ S G++ Y+PPE
Sbjct: 157 -----HAPSSRRTXLCGTLDYLPPE 176
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 20/180 (11%)
Query: 420 SLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISR 479
+L +L Q++L ELT ++ + G L ++DLS+N+ L+ LP
Sbjct: 51 TLMPYTRLTQLNLDRCELT-KLQVD-GTLPVLGTLDLSHNQ---------LQSLPLLGQT 99
Query: 480 LENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSN 539
L + +D+S N L+ +L+ L+EL + N+ P ++ LE L L++N
Sbjct: 100 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 159
Query: 540 KLSGSIPSDLQN-LQALRSLNLTFNNLEGVVPSEGIFRN--MSNVHLKGNPKLCLQLGCE 596
L+ +P+ L N L+ L +L L N+L + +G F + + L GNP LC CE
Sbjct: 160 NLT-ELPAGLLNGLENLDTLLLQENSLYTI--PKGFFGSHLLPFAFLHGNPWLC---NCE 213
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Query: 168 RSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLV 227
+ +L+ +NLL+ S+A L+P NL +LT ++ GT+P + L
Sbjct: 32 KDTTILHLSENLLYTF---SLATLMPYTRLTQLNLDRCELTKLQVDGTLP--VLGTLDLS 86
Query: 228 HLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEG 287
H +L S L G+ TLP L FNR T G+L L +Q + + N L+
Sbjct: 87 HNQLQSLPLLGQ-------TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK- 138
Query: 288 TLPPGL 293
TLPPGL
Sbjct: 139 TLPPGL 144
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 38.9 bits (89), Expect = 0.012, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 50 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 109
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ +FG +
Sbjct: 110 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS---- 158
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
V SS +T G++ Y+PPE
Sbjct: 159 --VHAPSSRRTT--LCGTLDYLPPE 179
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 67/171 (39%), Gaps = 57/171 (33%)
Query: 669 IGSGSFGSVLHNERTGSWKS------------------------FIAECETLRNV-RHRN 703
+G G+FG V+ E G K ++E E ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD---------------- 747
++ L+ +C+ L ++ E+ S G+L +++ R ++
Sbjct: 103 IINLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 748 --------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ ++YL + +H DL N+L+ E ++ DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLAR 205
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 38.9 bits (89), Expect = 0.013, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 49 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 108
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ +FG +
Sbjct: 109 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS---- 157
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
V SS +T G++ Y+PPE
Sbjct: 158 --VHAPSSRRTT--LCGTLDYLPPE 178
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 76/185 (41%), Gaps = 29/185 (15%)
Query: 655 ELRRATGNFSHENLIGSGSFGSVLHNERTGSWKSF----------IAECETLRNVRHRNL 704
+LR ++ +IG G+FG V + K + I ++ R++
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 705 VKLITSCSSLD----SKNMEFLALVYEFLSNGSLGDWI-------HGERKNELDITSALD 753
+ S + ++ +L +V E++ G L + + R ++ ALD
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALD 182
Query: 754 YLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIG 813
+H+ + +H D+KP N+LLD+ K+ DFG + N+ + +G+
Sbjct: 183 AIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM-----NKEGMVRCDTAVGTPD 234
Query: 814 YVPPE 818
Y+ PE
Sbjct: 235 YISPE 239
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E++ G + + R I +YLH+
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 160
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 161 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 210
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 211 ILSKGYNKAVD 221
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 118/280 (42%), Gaps = 64/280 (22%)
Query: 351 FSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIXXXXXXXXXXXXX 410
+++ + KLY+G N I P + LT+L L N +S
Sbjct: 97 YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS------------------- 137
Query: 411 NEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRI--------- 461
+P GI N KL + +S N L +F SL ++ LS+NR+
Sbjct: 138 --LPRGI---FHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIP 192
Query: 462 ---NGNIPKGILRPLPEEISRLENVVTIDLSDNSLS-----------------GNLPNS- 500
+ N+ +L L I+ V +D S NS++ NL ++
Sbjct: 193 SLFHANVSYNLLSTLAIPIA----VEELDASHNSINVVRGPVNVELTILKLQHNNLTDTA 248
Query: 501 -LKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDL--QNLQALRS 557
L N L E+ ++YN+ + + +++ LE L +S+N+L + +L Q + L+
Sbjct: 249 WLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRL---VALNLYGQPIPTLKV 305
Query: 558 LNLTFNNLEGVVPSEGIFRNMSNVHLKGNPKLCLQLGCEN 597
L+L+ N+L V ++ F + N++L N + L+L +
Sbjct: 306 LDLSHNHLLHVERNQPQFDRLENLYLDHNSIVTLKLSTHH 345
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 76/185 (41%), Gaps = 29/185 (15%)
Query: 655 ELRRATGNFSHENLIGSGSFGSVLHNERTGSWKSF----------IAECETLRNVRHRNL 704
+LR ++ +IG G+FG V + K + I ++ R++
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 705 VKLITSCSSLD----SKNMEFLALVYEFLSNGSLGDWI-------HGERKNELDITSALD 753
+ S + ++ +L +V E++ G L + + R ++ ALD
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALD 187
Query: 754 YLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIG 813
+H+ + +H D+KP N+LLD+ K+ DFG + N+ + +G+
Sbjct: 188 AIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM-----NKEGMVRCDTAVGTPD 239
Query: 814 YVPPE 818
Y+ PE
Sbjct: 240 YISPE 244
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 62/165 (37%), Gaps = 48/165 (29%)
Query: 669 IGSGSFGSVLHNERTGSWKS--------------------------FIAECETLRNVRHR 702
+G GSFG V R G W + FI E + ++ HR
Sbjct: 20 LGDGSFGVV----RRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 75
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALD 753
NL++L + K +V E GSL D + + + + + +
Sbjct: 76 NLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 129
Query: 754 YLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798
YL + +H DL N+LL K+GDFGL R L + D+
Sbjct: 130 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 76/185 (41%), Gaps = 29/185 (15%)
Query: 655 ELRRATGNFSHENLIGSGSFGSVLHNERTGSWKSF----------IAECETLRNVRHRNL 704
+LR ++ +IG G+FG V + K + I ++ R++
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 705 VKLITSCSSLD----SKNMEFLALVYEFLSNGSLGDWI-------HGERKNELDITSALD 753
+ S + ++ +L +V E++ G L + + R ++ ALD
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALD 187
Query: 754 YLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIG 813
+H+ + +H D+KP N+LLD+ K+ DFG + N+ + +G+
Sbjct: 188 AIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM-----NKEGMVRCDTAVGTPD 239
Query: 814 YVPPE 818
Y+ PE
Sbjct: 240 YISPE 244
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 69/171 (40%), Gaps = 19/171 (11%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
+I + YL+ + VH DL N ++ E+ T K+GDFG+ R + E + +
Sbjct: 146 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE---------TDY 193
Query: 807 VFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE--LR 864
G G +P + E S V T+ S F +V W + L E Q L E LR
Sbjct: 194 YRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 251
Query: 865 QLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQE 915
+M E + D ++ + C +P R E + +K E
Sbjct: 252 FVM---EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 29/164 (17%)
Query: 412 EIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRIN--------- 462
+IP +P S NL DLS N L SF +F L +DLS I
Sbjct: 23 KIPDNLPFSTKNL------DLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQS 76
Query: 463 ----------GNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLM 512
GN + + +S L+ +V ++ + SL N P + + K+L+EL +
Sbjct: 77 LSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE-NFP--IGHLKTLKELNV 133
Query: 513 AYNQF-SGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQAL 555
A+N S +P + L LE LDLSSNK+ +DL+ L +
Sbjct: 134 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 177
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 115 IGNLFRLRVLNISFNNLQG-ELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVL 173
IG+L L+ LN++ N +Q +LP S LT L+ LDL +NKI D LR L +
Sbjct: 122 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD----LRVLHQM 177
Query: 174 NFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYN-MTSLVHLRLA 232
L S+ P N I + LK L L N+L +VP I++ +TSL + L
Sbjct: 178 PLLNLSLDLSLNP--MNFIQPGAFKEIRLKELALDTNQLK-SVPDGIFDRLTSLQKIWLH 234
Query: 233 SNQLGGEIP 241
+N P
Sbjct: 235 TNPWDCSCP 243
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E++ G + + R I +YLH+
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS-- 160
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 161 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 210
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 211 ILSKGYNKAVD 221
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 743 KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSI 802
K + I AL++LH+ ++ V+H D+KP N+L++ K DFG++ +L++ V
Sbjct: 140 KIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDV------ 191
Query: 803 SSTHVFMGSIGYVPPE 818
+ + G Y PE
Sbjct: 192 -AKDIDAGCKPYXAPE 206
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 29/164 (17%)
Query: 412 EIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRIN--------- 462
+IP +P S NL DLS N L SF +F L +DLS I
Sbjct: 22 KIPDNLPFSTKNL------DLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQS 75
Query: 463 ----------GNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLM 512
GN + + +S L+ +V ++ + SL N P + + K+L+EL +
Sbjct: 76 LSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE-NFP--IGHLKTLKELNV 132
Query: 513 AYNQF-SGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQAL 555
A+N S +P + L LE LDLSSNK+ +DL+ L +
Sbjct: 133 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 176
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 115 IGNLFRLRVLNISFNNLQG-ELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVL 173
IG+L L+ LN++ N +Q +LP S LT L+ LDL +NKI D LR L +
Sbjct: 121 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD----LRVLHQM 176
Query: 174 NFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYN-MTSLVHLRLA 232
L S+ P N I + LK L L N+L +VP I++ +TSL + L
Sbjct: 177 PLLNLSLDLSLNP--MNFIQPGAFKEIRLKELALDTNQLK-SVPDGIFDRLTSLQKIWLH 233
Query: 233 SNQLGGEIP 241
+N P
Sbjct: 234 TNPWDCSCP 242
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 16/97 (16%)
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNG-------SLGDWIHGERKNELDITSALDYL 755
N+VKL+ SK +L++E+++N +L D+ R ++ ALDY
Sbjct: 108 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVLYPTLTDY--DIRYYIYELLKALDYC 162
Query: 756 HNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
H+ ++H D+KP N+++D E+ ++ D+GLA F
Sbjct: 163 HSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 196
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 52 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 111
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 112 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---- 160
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
V SS + G++ Y+PPE
Sbjct: 161 --VHAPSSRRTD--LCGTLDYLPPE 181
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 16/97 (16%)
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNG-------SLGDWIHGERKNELDITSALDYL 755
N+VKL+ SK +L++E+++N +L D+ R ++ ALDY
Sbjct: 88 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVLYPTLTDY--DIRYYIYELLKALDYC 142
Query: 756 HNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
H+ ++H D+KP N+++D E+ ++ D+GLA F
Sbjct: 143 HSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 176
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+++D++ KV DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E++ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+L+D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 107 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---- 155
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
V SS + G++ Y+PPE
Sbjct: 156 --VHAPSSRRTD--LCGTLDYLPPE 176
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 107 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---- 155
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
V SS + G++ Y+PPE
Sbjct: 156 --VHAPSSRRTD--LCGTLDYLPPE 176
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 48 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 107
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 108 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---- 156
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
V SS + G++ Y+PPE
Sbjct: 157 --VHAPSSRRTD--LCGTLDYLPPE 177
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR D+ ++
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTE--- 188
Query: 808 FMGSIGYVPPEYGLGERPST 827
++ + Y PE L + T
Sbjct: 189 YVATRWYRAPEIMLNSKGYT 208
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 16/97 (16%)
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNG-------SLGDWIHGERKNELDITSALDYL 755
N+VKL+ SK +L++E+++N +L D+ R ++ ALDY
Sbjct: 87 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVLYPTLTDY--DIRYYIYELLKALDYC 141
Query: 756 HNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
H+ ++H D+KP N+++D E+ ++ D+GLA F
Sbjct: 142 HSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 16/97 (16%)
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNG-------SLGDWIHGERKNELDITSALDYL 755
N+VKL+ SK +L++E+++N +L D+ R ++ ALDY
Sbjct: 87 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVLYPTLTDY--DIRYYIYELLKALDYC 141
Query: 756 HNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
H+ ++H D+KP N+++D E+ ++ D+GLA F
Sbjct: 142 HSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+++D++ KV DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 16/97 (16%)
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNG-------SLGDWIHGERKNELDITSALDYL 755
N+VKL+ SK +L++E+++N +L D+ R ++ ALDY
Sbjct: 87 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVLYPTLTDY--DIRYYIYELLKALDYC 141
Query: 756 HNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
H+ ++H D+KP N+++D E+ ++ D+GLA F
Sbjct: 142 HSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 16/97 (16%)
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNG-------SLGDWIHGERKNELDITSALDYL 755
N+VKL+ SK +L++E+++N +L D+ R ++ ALDY
Sbjct: 88 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVLYPTLTDY--DIRYYIYELLKALDYC 142
Query: 756 HNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
H+ ++H D+KP N+++D E+ ++ D+GLA F
Sbjct: 143 HSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 176
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 38.5 bits (88), Expect = 0.016, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 107 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---- 155
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
V SS + G++ Y+PPE
Sbjct: 156 --VHAPSSRRTE--LCGTLDYLPPE 176
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 87 ISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELK 146
IS +I FL + L N L+ LP EI NL LRVL++S N L LP + +LK
Sbjct: 239 ISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLK 296
Query: 147 MLDLMANKIT 156
N +T
Sbjct: 297 YFYFFDNMVT 306
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 355 LSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIXXXXXXXXXXXXXNEIP 414
L++LYL GN + ++PA I L +L +LDLS+N ++ +P E+ N +
Sbjct: 249 LTRLYLNGNSL-TELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFDNMV- 305
Query: 415 GGIPNSLANLKKLNQIDLSGNELTGEI 441
+P NL L + + GN L +
Sbjct: 306 TTLPWEFGNLCNLQFLGVEGNPLEKQF 332
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 521 IPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSN 580
+P + L L VLDLS N+L+ S+P++L + L+ F+N+ +P E F N+ N
Sbjct: 262 LPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYF-FDNMVTTLPWE--FGNLCN 317
Query: 581 VHL---KGNP 587
+ +GNP
Sbjct: 318 LQFLGVEGNP 327
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 36/135 (26%)
Query: 161 DDQLR---NLRSLQVLNFGKNLLWGSIPPSIA------NLIPSDLSRLENLKVLDLTINR 211
DDQL +L +LQ+ N N+ + +P+++ L NL+VLDL+ NR
Sbjct: 222 DDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNR 281
Query: 212 LAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHN 271
L ++P+ +LG L + Y F+ +P N
Sbjct: 282 LT-SLPA----------------ELGSCFQ----------LKYFYFFDNMVTTLPWEFGN 314
Query: 272 LTNIQIIRMTHNLLE 286
L N+Q + + N LE
Sbjct: 315 LCNLQFLGVEGNPLE 329
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 264 KIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITS 323
++P + NL+N++++ ++HN L +LP LG+ F Y F+ +V++ E
Sbjct: 261 ELPAEIKNLSNLRVLDLSHNRL-TSLPAELGSC-FQLKYFYFFDNMVTTLPWE------- 311
Query: 324 LTNSTHLNYLALDGNQFEGKI 344
N +L +L ++GN E +
Sbjct: 312 FGNLCNLQFLGVEGNPLEKQF 332
Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 461 INGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGP 520
+NGN L LP EI L N+ +DLS N L+ +LP L +C L+ ++
Sbjct: 254 LNGNS----LTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYF-FDNMVTT 307
Query: 521 IPNIVAELKGLEVLDLSSNKL 541
+P L L+ L + N L
Sbjct: 308 LPWEFGNLCNLQFLGVEGNPL 328
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 16/97 (16%)
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNG-------SLGDWIHGERKNELDITSALDYL 755
N+VKL+ SK +L++E+++N +L D+ R ++ ALDY
Sbjct: 87 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVLYPTLTDY--DIRYYIYELLKALDYC 141
Query: 756 HNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
H+ ++H D+KP N+++D E+ ++ D+GLA F
Sbjct: 142 HSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 69/171 (40%), Gaps = 19/171 (11%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
+I + YL+ + VH DL N ++ E+ T K+GDFG+ R + E + +
Sbjct: 146 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE---------TDY 193
Query: 807 VFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE--LR 864
G G +P + E S V T+ S F +V W + L E Q L E LR
Sbjct: 194 YRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 251
Query: 865 QLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQE 915
+M E + D ++ + C +P R E + +K E
Sbjct: 252 FVM---EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNEL 746
+ + E + + + + +V+LI C + E L LV E G L ++ G+R+ E+
Sbjct: 381 EEMMREAQIMHQLDNPYIVRLIGVCQA------EALMLVMEMAGGGPLHKFLVGKRE-EI 433
Query: 747 DITSALDYLHNDC-------EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
+++ + LH E VH +L N+LL AK+ DFGL++ L
Sbjct: 434 PVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 38/151 (25%)
Query: 669 IGSGSFGSVL--HNERTGSWKS-----------------FIAECETLRNVRHRNLVKLIT 709
+GSG++G VL ++ TG+ ++ + E L+ + H N++KL
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 710 SCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK-NELD-------ITSALDYLHNDCEV 761
D +N LV E G L D I +K +E+D + S YLH
Sbjct: 72 FFE--DKRNY---YLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH--- 123
Query: 762 PVVHSDLKPGNILLD---EEMTAKVGDFGLA 789
+VH DLKP N+LL+ + K+ DFGL+
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLS 154
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 16/97 (16%)
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNG-------SLGDWIHGERKNELDITSALDYL 755
N+VKL+ SK +L++E+++N +L D+ R ++ ALDY
Sbjct: 87 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVLYPTLTDY--DIRYYIYELLKALDYC 141
Query: 756 HNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
H+ ++H D+KP N+++D E+ ++ D+GLA F
Sbjct: 142 HSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 743 KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSI 802
K + + L YL ++ +H D+KP NIL++ K+ DFG++ L++ + N
Sbjct: 127 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--- 181
Query: 803 SSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
F+G+ Y+ PE G S D+
Sbjct: 182 -----FVGTRSYMSPERLQGTHYSVQSDI 205
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 16/97 (16%)
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNG-------SLGDWIHGERKNELDITSALDYL 755
N+VKL+ SK +L++E+++N +L D+ R ++ ALDY
Sbjct: 89 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVLYPTLTDY--DIRYYIYELLKALDYC 143
Query: 756 HNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
H+ ++H D+KP N+++D E+ ++ D+GLA F
Sbjct: 144 HSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 177
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 38.5 bits (88), Expect = 0.017, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 50 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 109
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 110 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV--- 159
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
+ S G++ Y+PPE
Sbjct: 160 -----HAPSSRRDDLCGTLDYLPPE 179
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 16/97 (16%)
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNG-------SLGDWIHGERKNELDITSALDYL 755
N+VKL+ SK +L++E+++N +L D+ R ++ ALDY
Sbjct: 87 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVLYPTLTDY--DIRYYIYELLKALDYC 141
Query: 756 HNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
H+ ++H D+KP N+++D E+ ++ D+GLA F
Sbjct: 142 HSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 72/185 (38%), Gaps = 42/185 (22%)
Query: 662 NFSHENLIGSGSFGSVLHNE-------------------RTGSWKSFIAECETLRNVRHR 702
+F NL+G GSF V E + G + E + ++H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 703 NLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK----NEL-----DITSALD 753
++++L ++ ++ LV E NG + ++ K NE I + +
Sbjct: 72 SILELYNYF-----EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGML 126
Query: 754 YLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIG 813
YLH+ ++H DL N+LL M K+ DFGLA L + + G+
Sbjct: 127 YLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQL------KMPHEKHYTLCGTPN 177
Query: 814 YVPPE 818
Y+ PE
Sbjct: 178 YISPE 182
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
I L Y+H+ V+H DLKP N+LL+ K+ DFGLAR
Sbjct: 138 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR 177
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.5 bits (88), Expect = 0.019, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 28/125 (22%)
Query: 687 KSFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN- 744
++ ++E + L ++ H N+V L+ +C+ L ++ EF G+L ++ +R
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGP----LMVIVEFCKFGNLSTYLRSKRNEF 130
Query: 745 -------------------ELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGD 785
+ +++L + +H DL NILL E+ K+ D
Sbjct: 131 VPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXD 187
Query: 786 FGLAR 790
FGLAR
Sbjct: 188 FGLAR 192
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 22/115 (19%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-----HGERKNE---LD 747
LR +H N++ L + +++ +V E + G L D I ER+
Sbjct: 70 LRYGQHPNIITLKDVYD-----DGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFT 124
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEM----TAKVGDFGLARFLLERVDN 798
IT ++YLH VVH DLKP NIL +E + ++ DFG A+ L R +N
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL--RAEN 174
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 27/139 (19%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-HGERKNELDITS 750
E LR V H N++ L +N + L+ E +S G L D++ E +E + TS
Sbjct: 65 EVSILRQVLHHNVITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 751 -------ALDYLHNDCEVPVVHSDLKPGNI-LLDEEM---TAKVGDFGLARFLLERVDNQ 799
++YLH + H DLKP NI LLD+ + K+ DFGLA + +
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH------EIE 170
Query: 800 SSISSTHVFMGSIGYVPPE 818
+ ++F G+ +V PE
Sbjct: 171 DGVEFKNIF-GTPEFVAPE 188
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+++D++ +V DFGLA+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLMIDQQGYIQVTDFGLAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 29/164 (17%)
Query: 412 EIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRIN--------- 462
+IP +P S NL DLS N L SF +F L +DLS I
Sbjct: 21 KIPDNLPFSTKNL------DLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQS 74
Query: 463 ----------GNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLM 512
GN + + +S L+ +V ++ + SL N P + + K+L+EL +
Sbjct: 75 LSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE-NFP--IGHLKTLKELNV 131
Query: 513 AYNQF-SGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQAL 555
A+N S +P + L LE LDLSSNK+ +DL+ L +
Sbjct: 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 115 IGNLFRLRVLNISFNNLQG-ELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVL 173
IG+L L+ LN++ N +Q +LP S LT L+ LDL +NKI D LR L +
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD----LRVLHQM 175
Query: 174 NFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYN-MTSLVHLRLA 232
L S+ P N I + LK L L N+L +VP I++ +TSL + L
Sbjct: 176 PLLNLSLDLSLNP--MNFIQPGAFKEIRLKELALDTNQLK-SVPDGIFDRLTSLQKIWLH 232
Query: 233 SNQLGGEIP 241
+N P
Sbjct: 233 TNPWDCSCP 241
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 29/164 (17%)
Query: 412 EIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRIN--------- 462
+IP +P S NL DLS N L SF +F L +DLS I
Sbjct: 22 KIPDNLPFSTKNL------DLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQS 75
Query: 463 ----------GNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLM 512
GN + + +S L+ +V ++ + SL N P + + K+L+EL +
Sbjct: 76 LSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE-NFP--IGHLKTLKELNV 132
Query: 513 AYNQF-SGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQAL 555
A+N S +P + L LE LDLSSNK+ +DL+ L +
Sbjct: 133 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 176
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 110 NLPREIGNLFRLRVLNISFNNLQG-ELPVNISKLTELKMLDLMANKITGRVTDDQLRNLR 168
N P IG+L L+ LN++ N +Q +LP S LT L+ LDL +NKI D LR
Sbjct: 118 NFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD----LR 171
Query: 169 SLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYN-MTSLV 227
L + L S+ P N I + LK L L N+L +VP I++ +TSL
Sbjct: 172 VLHQMPLLNLSLDLSLNP--MNFIQPGAFKEIRLKELALDTNQLK-SVPDGIFDRLTSLQ 228
Query: 228 HLRLASNQLGGEIP 241
+ L +N P
Sbjct: 229 KIWLHTNPWDCSCP 242
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 27/139 (19%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-HGERKNELDITS 750
E LR V H N++ L +N + L+ E +S G L D++ E +E + TS
Sbjct: 65 EVSILRQVLHHNVITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 751 -------ALDYLHNDCEVPVVHSDLKPGNI-LLDEEM---TAKVGDFGLARFLLERVDNQ 799
++YLH + H DLKP NI LLD+ + K+ DFGLA + +
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH------EIE 170
Query: 800 SSISSTHVFMGSIGYVPPE 818
+ ++F G+ +V PE
Sbjct: 171 DGVEFKNIF-GTPEFVAPE 188
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 38.1 bits (87), Expect = 0.024, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 22/145 (15%)
Query: 681 ERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM--EF--LALVYEFLSNGSLGD 736
E+ G E E ++RH N+++L + E+ L VY L S D
Sbjct: 73 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 132
Query: 737 WIHGERKNELDIT---SALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
E++ IT +AL Y H+ V+H D+KP N+LL K+ DFG +
Sbjct: 133 ----EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV--- 182
Query: 794 ERVDNQSSISSTHVFMGSIGYVPPE 818
+ S G++ Y+PPE
Sbjct: 183 -----HAPSSRRDDLCGTLDYLPPE 202
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.1 bits (87), Expect = 0.024, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 28/125 (22%)
Query: 687 KSFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN- 744
++ ++E + L ++ H N+V L+ +C+ L ++ EF G+L ++ +R
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGP----LMVIVEFCKFGNLSTYLRSKRNEF 130
Query: 745 -------------------ELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGD 785
+ +++L + +H DL NILL E+ K+ D
Sbjct: 131 VPYKDLYKDFLTLEHLICYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICD 187
Query: 786 FGLAR 790
FGLAR
Sbjct: 188 FGLAR 192
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 38.1 bits (87), Expect = 0.024, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 16/123 (13%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
+I + YL+ + VH DL N ++ E+ T K+GDFG+ R + E +
Sbjct: 140 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK------ 190
Query: 807 VFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE--LR 864
G G +P + E S V T+ S F +V W + L E Q L E LR
Sbjct: 191 ---GGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 245
Query: 865 QLM 867
+M
Sbjct: 246 FVM 248
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 70 GNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLS-GNLPREIGNLFRLRVLNISF 128
GN + L L +F G S + + L+ N S N P IG+L L+ LN++
Sbjct: 87 GNPIQSLALGAFS---------GLSSLQKLVALETNLASLENFP--IGHLKTLKELNVAH 135
Query: 129 NNLQG-ELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPS 187
N +Q +LP S LT L+ LDL +NKI D LR L + L S+ P
Sbjct: 136 NLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD----LRVLHQMPLLNLSLDLSLNP- 190
Query: 188 IANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYN-MTSLVHLRLASNQLGGEIP 241
N I + LK L L N+L +VP I++ +TSL + L +N P
Sbjct: 191 -MNFIQPGAFKEIRLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 243
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 29/164 (17%)
Query: 412 EIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRIN--------- 462
+IP +P S NL DLS N L SF +F L +DLS I
Sbjct: 23 KIPDNLPFSTKNL------DLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQS 76
Query: 463 ----------GNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLM 512
GN + + +S L+ +V ++ + SL N P + + K+L+EL +
Sbjct: 77 LSHLSTLILTGNPIQSLALGAFSGLSSLQKLVALETNLASLE-NFP--IGHLKTLKELNV 133
Query: 513 AYNQF-SGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQAL 555
A+N S +P + L LE LDLSSNK+ +DL+ L +
Sbjct: 134 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 177
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 27/139 (19%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-HGERKNELDITS 750
E LR V H N++ L +N + L+ E +S G L D++ E +E + TS
Sbjct: 65 EVSILRQVLHHNVITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 751 -------ALDYLHNDCEVPVVHSDLKPGNI-LLDEEM---TAKVGDFGLARFLLERVDNQ 799
++YLH + H DLKP NI LLD+ + K+ DFGLA + +
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH------EIE 170
Query: 800 SSISSTHVFMGSIGYVPPE 818
+ ++F G+ +V PE
Sbjct: 171 DGVEFKNIF-GTPEFVAPE 188
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 20/106 (18%)
Query: 700 RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSAL-----DY 754
+H N+V L+ +C+ + ++ E+ G L +++ + + +LD D
Sbjct: 100 QHENIVNLLGACTHGGP-----VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 755 LHNDCEVP----------VVHSDLKPGNILLDEEMTAKVGDFGLAR 790
LH +V +H D+ N+LL AK+GDFGLAR
Sbjct: 155 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 200
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 27/139 (19%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-HGERKNELDITS 750
E LR V H N++ L +N + L+ E +S G L D++ E +E + TS
Sbjct: 65 EVSILRQVLHHNVITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 751 -------ALDYLHNDCEVPVVHSDLKPGNI-LLDEEM---TAKVGDFGLARFLLERVDNQ 799
++YLH + H DLKP NI LLD+ + K+ DFGLA + +
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH------EIE 170
Query: 800 SSISSTHVFMGSIGYVPPE 818
+ ++F G+ +V PE
Sbjct: 171 DGVEFKNIF-GTPEFVAPE 188
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 37.7 bits (86), Expect = 0.027, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 16/123 (13%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
+I + YL+ + VH DL N + E+ T K+GDFG+ R + E + +
Sbjct: 133 EIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE---------TDY 180
Query: 807 VFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE--LR 864
G G +P + E S V T+ S F +V W + L E Q L E LR
Sbjct: 181 YRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 238
Query: 865 QLM 867
+M
Sbjct: 239 FVM 241
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 37.7 bits (86), Expect = 0.028, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 11/99 (11%)
Query: 764 VHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE 823
VH DL N ++ + T K+GDFG+ R + E + + G G +P + E
Sbjct: 152 VHRDLAARNCMVAHDFTVKIGDFGMTRDIYE---------TAYYRKGGKGLLPVRWMAPE 202
Query: 824 RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE 862
S V T+ S F +V W ++L E Q L E
Sbjct: 203 --SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 139 ISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSR 198
S T+L+ L L N+I ++ D+ L L LN +N L GSI +
Sbjct: 295 FSHFTDLEQLTLAQNEI-NKIDDNAFWGLTHLLKLNLSQNFL-GSIDSRM-------FEN 345
Query: 199 LENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNL 251
L+ L+VLDL+ N + + + +L L L +NQL +P + D L +L
Sbjct: 346 LDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKS-VPDGIFDRLTSL 397
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 150/381 (39%), Gaps = 62/381 (16%)
Query: 201 NLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNR 260
++ +DL++N +A ++ + L L++ G I + L +L+ +N+
Sbjct: 31 HVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQ 90
Query: 261 FTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPG-----LGNLPFLRTYNIGFNKIVSSGDD 315
F G+ + L N++++ +T L+G + G L +L L + KI
Sbjct: 91 FLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKI------ 144
Query: 316 EGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGR 375
+ SF N + L L N+ + E + NF G H ++ R
Sbjct: 145 QPASF---FLNMRRFHVLDLTFNKVKSICEEDLLNFQ---------GKHF------TLLR 186
Query: 376 LRSLTLLDLSYNSISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGN 435
L S+TL D++ + E N N + +DLSGN
Sbjct: 187 LSSITLQDMNEYWLGWE-----------------------KCGNPFKN-TSITTLDLSGN 222
Query: 436 ELTGEIPISFGNF---QSLLSIDLSNNRINGNIPKGILRPLPEEIS----RLENVVTIDL 488
+ F + + S+ LSN+ G+ P+ + V T DL
Sbjct: 223 GFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDL 282
Query: 489 SDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSD 548
S + + L + + LE+L +A N+ + N L L L+LS N L GSI S
Sbjct: 283 SKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFL-GSIDSR 341
Query: 549 L-QNLQALRSLNLTFNNLEGV 568
+ +NL L L+L++N++ +
Sbjct: 342 MFENLDKLEVLDLSYNHIRAL 362
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 157/384 (40%), Gaps = 36/384 (9%)
Query: 187 SIANLIPSDLSRLENLKVLDLTINRLAGTV--PSTIYNMTSLVHLRLASNQLGGEIPYDV 244
SIA L + SRL++L+ L + + G V +T ++SL+ L+L NQ ++
Sbjct: 41 SIAELNETSFSRLQDLQFLKVE-QQTPGLVIRNNTFRGLSSLIILKLDYNQFL-QLETGA 98
Query: 245 RDTLPNL--LDFIYCFNRFTGKIPGSLHN-LTNIQIIRMTHNLLEGTLPPGLG-NLPFLR 300
+ L NL L C N + G+ LT+++++ + N ++ P N+
Sbjct: 99 FNGLANLEVLTLTQC-NLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFH 157
Query: 301 TYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLAL-DGNQFEGKIPESIGNFSN-ELSKL 358
++ FNK+ S +++ L+F L+ + L D N++ + F N ++ L
Sbjct: 158 VLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTL 217
Query: 359 YLGGNHIYGKIPASI------GRLRSLTLLDLSYNSISG----------EIPIEIXXXXX 402
L GN + +++SL L + SYN S +
Sbjct: 218 DLSGNGFKESMAKRFFDAIAGTKIQSLILSN-SYNMGSSFGHTNFKDPDNFTFKGLEASG 276
Query: 403 XXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRIN 462
++I + + ++ L Q+ L+ NE+ +F LL ++LS N +
Sbjct: 277 VKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFL- 335
Query: 463 GNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIP 522
G+I + E + +LE +DLS N + S +L+EL + NQ
Sbjct: 336 GSIDSRMF----ENLDKLE---VLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPD 388
Query: 523 NIVAELKGLEVLDLSSNKLSGSIP 546
I L L+ + L +N S P
Sbjct: 389 GIFDRLTSLQKIWLHTNPWDCSCP 412
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 14/116 (12%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
+I + YL+ VH DL N ++ + T K+GDFG+ R + E + +
Sbjct: 137 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE---------TDY 184
Query: 807 VFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE 862
G G +P + E S V T+ S F +V W ++L E Q L E
Sbjct: 185 YRKGGKGLLPVRWMAPE--SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 238
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 37.7 bits (86), Expect = 0.029, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 16/123 (13%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806
+I + YL+ + VH DL N ++ E+ T K+GDFG+ R + E +
Sbjct: 131 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK------ 181
Query: 807 VFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE--LR 864
G G +P + E S V T+ S F +V W + L E Q L E LR
Sbjct: 182 ---GGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 236
Query: 865 QLM 867
+M
Sbjct: 237 FVM 239
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 37.7 bits (86), Expect = 0.029, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 25/142 (17%)
Query: 692 ECETLRNVR-HRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK-NEL--- 746
E ETL + ++N+++LI D++ LV+E L GS+ I ++ NE
Sbjct: 60 EVETLYQCQGNKNILELIEFFED-DTR----FYLVFEKLQGGSILAHIQKQKHFNEREAS 114
Query: 747 ----DITSALDYLHNDCEVPVVHSDLKPGNILLD--EEMT-AKVGDFGLARFLLERVDNQ 799
D+ +ALD+LH + H DLKP NIL + E+++ K+ DF L + +++N
Sbjct: 115 RVVRDVAAALDFLHTK---GIAHRDLKPENILCESPEKVSPVKICDFDLGSGM--KLNNS 169
Query: 800 SSISSTHVFM---GSIGYVPPE 818
+ +T GS Y+ PE
Sbjct: 170 CTPITTPELTTPCGSAEYMAPE 191
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 36/161 (22%)
Query: 655 ELRRATGNFSHENLIGSGSFG--SVLHNERTGS---------WK--------SFIAECET 695
E+R +F +IG G+F +V+ ++TG W F E +
Sbjct: 55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDV 114
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSL-------GDWIHGE--RKNEL 746
L N R + +L ++ +L LV E+ G L G+ I E R
Sbjct: 115 LVNGDRRWITQL-----HFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLA 169
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFG 787
+I A+D +H + VH D+KP NILLD ++ DFG
Sbjct: 170 EIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFG 207
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 700 RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSAL-----DY 754
+H N+V L+ +C+ + ++ E+ G L +++ + + +LD D
Sbjct: 108 QHENIVNLLGACTHGGP-----VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 162
Query: 755 LHNDCEVP----------VVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
LH +V +H D+ N+LL AK+GDFGLAR ++
Sbjct: 163 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 211
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 86/227 (37%), Gaps = 68/227 (29%)
Query: 669 IGSGSFGSVLHNERTGSWKS------------------------FIAECETLRNV-RHRN 703
+G G+FG V+ E G K ++E E ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD---------------- 747
++ L+ +C+ L ++ + S G+L +++ R ++
Sbjct: 103 IINLLGACTQDGP-----LYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 748 --------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799
+ ++YL + +H DL N+L+ E K+ DFGLAR ++N
Sbjct: 158 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNI 210
Query: 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846
T + ++ PE L +R V T +S F ++ W
Sbjct: 211 DYYKKTTNGRLPVKWMAPE-ALFDR------VYTHQSDVWSFGVLMW 250
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 20/119 (16%)
Query: 722 LALVYEFLSNGSLGDWIHGERKN---------ELDITSALDYLHNDCEVPVVHSDLKPGN 772
+++ E + GSL D + E K + + L YL ++ +H D+KP N
Sbjct: 89 ISICMEHMDGGSL-DQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQI--MHRDVKPSN 145
Query: 773 ILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
IL++ K+ DFG++ L++ + N F+G+ Y+ PE G S D+
Sbjct: 146 ILVNSRGEIKLCDFGVSGQLIDSMANS--------FVGTRSYMAPERLQGTHYSVQSDI 196
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 120/311 (38%), Gaps = 39/311 (12%)
Query: 273 TNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNY 332
+NI ++ +THN L P L + GFN I S + L I L L
Sbjct: 25 SNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSI--SKLEPELCQILPL-----LKV 77
Query: 333 LALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGE 392
L L N+ +I + F L++L L N I+ ++L LDLS+N +S
Sbjct: 78 LNLQHNEL-SQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSST 136
Query: 393 IPIEIXXXXXXXXXXXXXNEIPGGIPNSLANL--KKLNQIDLSGNELTGEIPISFGNFQS 450
N+I L L L ++DLS N L P F
Sbjct: 137 KLGTGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGK 196
Query: 451 LLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEEL 510
L ++ L+N ++N ++ + + L ++ + L++N L L
Sbjct: 197 LFALLLNNAQLNPHLTEKLCWELSN-----TSIQNLSLANNQL----------------L 235
Query: 511 LMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVP 570
+ + FSG + L LDLS N L L +LR L+L +NN++ + P
Sbjct: 236 ATSESTFSG------LKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSP 289
Query: 571 SEGIFRNMSNV 581
F +SN+
Sbjct: 290 RS--FYGLSNL 298
Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 9/118 (7%)
Query: 121 LRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLL 180
+ VLN++ N L+ P N ++ ++L +LD N I+ ++ + + L L+VLN N
Sbjct: 27 ITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSIS-KLEPELCQILPLLKVLNLQHN-- 83
Query: 181 WGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGG 238
++ + NL LDL N + + N +L+ L L+ N L
Sbjct: 84 ------ELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSS 135
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
I L Y+H+ V+H DLKP N+L++ K+ DFGLAR
Sbjct: 153 ILRGLKYIHS---ANVLHRDLKPSNLLINTTCDLKICDFGLAR 192
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 743 KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSI 802
K + + L YL ++ +H D+KP NIL++ K+ DFG++ L++ + N
Sbjct: 108 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--- 162
Query: 803 SSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
F+G+ Y+ PE G S D+
Sbjct: 163 -----FVGTRSYMSPERLQGTHYSVQSDI 186
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 73/179 (40%), Gaps = 36/179 (20%)
Query: 669 IGSGSFGSVLHNERTGSW---------------KSFIAECETLRNV--RHRNLVKLITSC 711
+G G +G V GSW KS+ E E V RH N++ I S
Sbjct: 45 VGKGRYGEVWR----GSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 712 SSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-------LDITSALDYLH-----NDC 759
+ + + L L+ + GSL D++ + L I S L +LH
Sbjct: 101 MTSRHSSTQ-LWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
+ + H DLK NIL+ + + D GLA + + NQ + + + +G+ Y+ PE
Sbjct: 160 KPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGN-NPRVGTKRYMAPE 216
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 743 KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSI 802
K + + L YL ++ +H D+KP NIL++ K+ DFG++ L++ + N
Sbjct: 108 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--- 162
Query: 803 SSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
F+G+ Y+ PE G S D+
Sbjct: 163 -----FVGTRSYMSPERLQGTHYSVQSDI 186
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 743 KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSI 802
K + + L YL ++ +H D+KP NIL++ K+ DFG++ L++ + N
Sbjct: 108 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--- 162
Query: 803 SSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
F+G+ Y+ PE G S D+
Sbjct: 163 -----FVGTRSYMSPERLQGTHYSVQSDI 186
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 743 KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSI 802
K + + L YL ++ +H D+KP NIL++ K+ DFG++ L++ + N
Sbjct: 108 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--- 162
Query: 803 SSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
F+G+ Y+ PE G S D+
Sbjct: 163 -----FVGTRSYMSPERLQGTHYSVQSDI 186
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Query: 332 YLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYN---S 388
YL L+ N + +P + + L++LYLGGN + +L SLT L+LS N S
Sbjct: 32 YLDLETNSLKS-LPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQS 90
Query: 389 ISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNF 448
+ + ++ +P G+ + L LK L L N+L F
Sbjct: 91 LPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR---LYQNQLKSVPDGVFDRL 147
Query: 449 QSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLK 502
SL I L +N + P +R L E I++ VV NS P+S K
Sbjct: 148 TSLQYIWLHDNPWDCTCPG--IRYLSEWINKHSGVVR-----NSAGSVAPDSAK 194
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Query: 94 LSFLRSIQLQNNKLSGNLPREIGN-LFRLRVLNISFNNLQGELPVNI-SKLTELKMLDLM 151
L+ L + L NKL +LP + N L L LN+S N LQ LP + KLT+LK L L
Sbjct: 51 LTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALN 108
Query: 152 ANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINR 211
N++ + D L L+ L +N L S+P + RL +L+ + L N
Sbjct: 109 TNQLQS-LPDGVFDKLTQLKDLRLYQNQL-KSVPDGV-------FDRLTSLQYIWLHDNP 159
Query: 212 LAGTVPSTIY 221
T P Y
Sbjct: 160 WDCTCPGIRY 169
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 14/146 (9%)
Query: 124 LNISFNNLQGELPVNI-SKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWG 182
L++ N+L+ LP + +LT L L L NK+ + + L SL LN N L
Sbjct: 33 LDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQS-LPNGVFNKLTSLTYLNLSTNQL-Q 89
Query: 183 SIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYN-MTSLVHLRLASNQLGGEIP 241
S+P + +L LK L L N+L ++P +++ +T L LRL NQL +P
Sbjct: 90 SLPNGV-------FDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQL-KSVP 140
Query: 242 YDVRDTLPNLLDFIYCFNRFTGKIPG 267
V D L +L N + PG
Sbjct: 141 DGVFDRLTSLQYIWLHDNPWDCTCPG 166
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 68/171 (39%), Gaps = 16/171 (9%)
Query: 413 IPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRP 472
+P GIP + +DL N L F SL + L N++ ++P G+
Sbjct: 22 VPTGIP------AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVF-- 72
Query: 473 LPEEISRLENVVTIDLSDNSLSGNLPNSL-KNCKSLEELLMAYNQFSGPIPNIVAELKGL 531
++L ++ ++LS N L +LPN + L+EL + NQ + +L L
Sbjct: 73 -----NKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQL 126
Query: 532 EVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVH 582
+ L L N+L L +L+ + L N + P N H
Sbjct: 127 KDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYLSEWINKH 177
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 743 KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSI 802
K + + L YL ++ +H D+KP NIL++ K+ DFG++ L++ + N
Sbjct: 108 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--- 162
Query: 803 SSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
F+G+ Y+ PE G S D+
Sbjct: 163 -----FVGTRSYMSPERLQGTHYSVQSDI 186
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 743 KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSI 802
K + + L YL ++ +H D+KP NIL++ K+ DFG++ L++ + N
Sbjct: 170 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--- 224
Query: 803 SSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
F+G+ Y+ PE G S D+
Sbjct: 225 -----FVGTRSYMSPERLQGTHYSVQSDI 248
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 743 KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSI 802
K + + L YL ++ +H D+KP NIL++ K+ DFG++ L++ + N
Sbjct: 135 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--- 189
Query: 803 SSTHVFMGSIGYVPPEYGLGERPSTAGDV 831
F+G+ Y+ PE G S D+
Sbjct: 190 -----FVGTRSYMSPERLQGTHYSVQSDI 213
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 48/173 (27%)
Query: 669 IGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNV-RHRNLV 705
+G G+FG V+ + G ++ ++E + L ++ H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 706 KLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHND------- 758
L+ +C+ L ++ EF G+L ++ +R + A + L+ D
Sbjct: 97 NLLGACTKPGGP----LMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 759 --------------CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797
+H DL NILL E+ K+ DFGLAR + + D
Sbjct: 153 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 205
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 37.4 bits (85), Expect = 0.038, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 11/99 (11%)
Query: 764 VHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE 823
VH DL N ++ + T K+GDFG+ R + E + + G G +P + E
Sbjct: 152 VHRDLAARNCMVAHDFTVKIGDFGMTRDIYE---------TDYYRKGGKGLLPVRWMAPE 202
Query: 824 RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE 862
S V T+ S F +V W ++L E Q L E
Sbjct: 203 --SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
+I ALDY H+ + ++H D+KP N+L+D E ++ D+GLA F
Sbjct: 139 EILKALDYCHS---MGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEF 181
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 34/191 (17%)
Query: 662 NFSHENLIGSGSFGSVL---HNERTGSWKSFIAECET---LRNVRHR-NLVKLITSCSSL 714
F +G+GSFG V+ H E + I + + L+ + H N +++ + +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 715 DSKNMEF-------LALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDC 759
+EF L +V E+ G + + R I +YLH+
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEY 819
+ +++ DLKP N+++D++ +V DFG A+ RV + T G+ Y+ PE
Sbjct: 160 -LDLIYRDLKPENLMIDQQGYIQVTDFGFAK----RVKGR-----TWXLCGTPEYLAPEI 209
Query: 820 GLGERPSTAGD 830
L + + A D
Sbjct: 210 ILSKGYNKAVD 220
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 26/115 (22%)
Query: 700 RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDIT---------- 749
+H N+V L+ +C+ + ++ E+ G L +++ +R L+ +
Sbjct: 108 QHENIVNLLGACTHGGP-----VLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 750 -SALDYLHNDCEVP----------VVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793
S+ D LH +V +H D+ N+LL AK+GDFGLAR ++
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 217
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 48/173 (27%)
Query: 669 IGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNV-RHRNLV 705
+G G+FG V+ + G ++ ++E + L ++ H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 706 KLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHND------- 758
L+ +C+ L ++ EF G+L ++ +R + A + L+ D
Sbjct: 132 NLLGACTKPGGP----LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 759 --------------CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797
+H DL NILL E+ K+ DFGLAR + + D
Sbjct: 188 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 240
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 73/179 (40%), Gaps = 36/179 (20%)
Query: 669 IGSGSFGSVLHNERTGSW---------------KSFIAECETLRNV--RHRNLVKLITSC 711
+G G +G V GSW KS+ E E V RH N++ I S
Sbjct: 16 VGKGRYGEVWR----GSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 712 SSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-------LDITSALDYLH-----NDC 759
+ + + L L+ + GSL D++ + L I S L +LH
Sbjct: 72 MTSRHSSTQ-LWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 130
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
+ + H DLK NIL+ + + D GLA + + NQ + + + +G+ Y+ PE
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGN-NPRVGTKRYMAPE 187
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 73/179 (40%), Gaps = 36/179 (20%)
Query: 669 IGSGSFGSVLHNERTGSW---------------KSFIAECETLRNV--RHRNLVKLITSC 711
+G G +G V GSW KS+ E E V RH N++ I S
Sbjct: 16 VGKGRYGEVWR----GSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 712 SSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNE-------LDITSALDYLH-----NDC 759
+ + + L L+ + GSL D++ + L I S L +LH
Sbjct: 72 MTSRHSSTQ-LWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 130
Query: 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPE 818
+ + H DLK NIL+ + + D GLA + + NQ + + + +G+ Y+ PE
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGN-NPRVGTKRYMAPE 187
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 37.4 bits (85), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 15/88 (17%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE----RVDNQSSIS 803
+ + + YL E VH DL N L+ E M K+ DFGL+R + + D +I
Sbjct: 183 VAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAI- 238
Query: 804 STHVFMGSIGYVPPEYGLGERPSTAGDV 831
I ++PPE R +T DV
Sbjct: 239 -------PIRWMPPESIFYNRYTTESDV 259
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 655 ELRRATGNFSHENLIGSGSFGSV--LHNERTGSWKSFIAECETLRNVRHRNLVKLITSCS 712
E R +H+ +G GSFG V + +++TG F + +R R V+ + +C+
Sbjct: 68 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTG----FQCAVKKVRLEVFR--VEELVACA 121
Query: 713 SLDS----------KNMEFLALVYEFLSNGSLGDWIHG-----ERKNELDITSA---LDY 754
L S + ++ + E L GSLG I E + + A L+Y
Sbjct: 122 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEY 181
Query: 755 LHNDCEVPVVHSDLKPGNILLDEEMT-AKVGDFGLARFLLERVDNQSSISSTHVFMGSIG 813
LH ++H D+K N+LL + + A + DFG A L +S ++ ++ G+
Sbjct: 182 LHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI-PGTET 237
Query: 814 YVPPEYGLGERPSTAGDVPTS 834
++ PE +G+ D+ +S
Sbjct: 238 HMAPEVVMGKPCDAKVDIWSS 258
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 22/115 (19%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-----HGERKNE---LD 747
LR +H N++ L + +++ +V E G L D I ER+
Sbjct: 70 LRYGQHPNIITLKDVYD-----DGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFT 124
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEM----TAKVGDFGLARFLLERVDN 798
IT ++YLH VVH DLKP NIL +E + ++ DFG A+ L R +N
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL--RAEN 174
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 13/77 (16%)
Query: 723 ALVYEFLSN-------GSLGDWIHGERKNELDITSALDYLHNDCEVPVVHSDLKPGNILL 775
ALV+E ++N +L D+ R +I ALDY H+ + ++H D+KP N+++
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDY--DIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMI 164
Query: 776 DEEMTA-KVGDFGLARF 791
D E ++ D+GLA F
Sbjct: 165 DHEHRKLRLIDWGLAEF 181
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 42/155 (27%)
Query: 669 IGSGSFGSVLHNERTGSWKSFIA----------------------ECETLRNVRHRNLVK 706
+GSG F V + G+ K + A E LR +RH N++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 707 LITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------ITSALDYLHND 758
L +N + L+ E +S G L D++ + D I + YLH+
Sbjct: 73 LHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK 127
Query: 759 CEVPVVHSDLKPGNI-LLDEEM---TAKVGDFGLA 789
+ H DLKP NI LLD+ + K+ DFG+A
Sbjct: 128 ---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 655 ELRRATGNFSHENLIGSGSFGSV--LHNERTGSWKSFIAECETLRNVRHRNLVKLITSCS 712
E R +H+ +G GSFG V + +++TG F + +R R V+ + +C+
Sbjct: 52 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTG----FQCAVKKVRLEVFR--VEELVACA 105
Query: 713 SLDS----------KNMEFLALVYEFLSNGSLGDWIHG-----ERKNELDITSA---LDY 754
L S + ++ + E L GSLG I E + + A L+Y
Sbjct: 106 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEY 165
Query: 755 LHNDCEVPVVHSDLKPGNILLDEEMT-AKVGDFGLARFLLERVDNQSSISSTHVFMGSIG 813
LH ++H D+K N+LL + + A + DFG A L +S ++ ++ G+
Sbjct: 166 LHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI-PGTET 221
Query: 814 YVPPEYGLGERPSTAGDVPTS 834
++ PE +G+ D+ +S
Sbjct: 222 HMAPEVVMGKPCDAKVDIWSS 242
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 42/155 (27%)
Query: 669 IGSGSFGSVLHNERTGSWKSFIA----------------------ECETLRNVRHRNLVK 706
+GSG F V + G+ K + A E LR +RH N++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 707 LITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------ITSALDYLHND 758
L +N + L+ E +S G L D++ + D I + YLH+
Sbjct: 94 LHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK 148
Query: 759 CEVPVVHSDLKPGNI-LLDEEM---TAKVGDFGLA 789
+ H DLKP NI LLD+ + K+ DFG+A
Sbjct: 149 ---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 66/171 (38%), Gaps = 57/171 (33%)
Query: 669 IGSGSFGSVLHNERTGSWKS------------------------FIAECETLRNV-RHRN 703
+G G+FG V+ E G K ++E E ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD---------------- 747
++ L+ +C+ L ++ + S G+L +++ R ++
Sbjct: 103 IINLLGACTQDGP-----LYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 748 --------ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+ ++YL + +H DL N+L+ E K+ DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 42/155 (27%)
Query: 669 IGSGSFGSVLHNERTGSWKSFIA----------------------ECETLRNVRHRNLVK 706
+GSG F V + G+ K + A E LR +RH N++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 707 LITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELD--------ITSALDYLHND 758
L +N + L+ E +S G L D++ + D I + YLH+
Sbjct: 80 LHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK 134
Query: 759 CEVPVVHSDLKPGNI-LLDEEM---TAKVGDFGLA 789
+ H DLKP NI LLD+ + K+ DFG+A
Sbjct: 135 ---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 37.0 bits (84), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 723 ALVYEFLSNGSLGDWI-----HGERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE 777
ALV+E ++N + R +I ALDY H+ + ++H D+KP N+++D
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDH 166
Query: 778 EMTA-KVGDFGLARF 791
E ++ D+GLA F
Sbjct: 167 EHRKLRLIDWGLAEF 181
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 60/144 (41%), Gaps = 10/144 (6%)
Query: 118 LFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGK 177
L +L LN+ +N LQ LTEL L L N++ + +L L L G
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGG 116
Query: 178 NLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLG 237
N L S+P + RL LK L L N+L +T+L L L++NQL
Sbjct: 117 NQL-KSLPSGV-------FDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL- 167
Query: 238 GEIPYDVRDTLPNLLDFIYCFNRF 261
+P+ D L L N+F
Sbjct: 168 QSVPHGAFDRLGKLQTITLFGNQF 191
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 52/135 (38%), Gaps = 25/135 (18%)
Query: 328 THLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYN 387
T L L L NQ +P + + +L KLYLGGN + RL L L L+ N
Sbjct: 83 TELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTN 141
Query: 388 SISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGN 447
+ IP G + L NL+ L+ LS N+L +F
Sbjct: 142 QL---------------------QSIPAGAFDKLTNLQTLS---LSTNQLQSVPHGAFDR 177
Query: 448 FQSLLSIDLSNNRIN 462
L +I L N+ +
Sbjct: 178 LGKLQTITLFGNQFD 192
Score = 32.7 bits (73), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 16/159 (10%)
Query: 411 NEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGIL 470
+ +P GIP A+ +KL DL L +F L ++L N++ + G+
Sbjct: 27 DSVPSGIP---ADTEKL---DLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSAGVF 79
Query: 471 RPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKG 530
L E + T+ L++N L+ + L++L + NQ + L
Sbjct: 80 DDLTE-------LGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTK 132
Query: 531 LEVLDLSSNKLSGSIPSD-LQNLQALRSLNLTFNNLEGV 568
L+ L L++N+L SIP+ L L++L+L+ N L+ V
Sbjct: 133 LKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSV 170
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 655 ELRRATGNFSHENLIGSGSFGSV--LHNERTGSWKSFIAECETLRNVRHRNLVKLITSCS 712
E R +H+ +G GSFG V + +++TG F + +R R V+ + +C+
Sbjct: 66 EYREEVHWMTHQPRLGRGSFGEVHRMKDKQTG----FQCAVKKVRLEVFR--VEELVACA 119
Query: 713 SLDS----------KNMEFLALVYEFLSNGSLGDWIHG-----ERKNELDITSA---LDY 754
L S + ++ + E L GSLG I E + + A L+Y
Sbjct: 120 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEY 179
Query: 755 LHNDCEVPVVHSDLKPGNILLDEEMT-AKVGDFGLARFLLERVDNQSSISSTHVFMGSIG 813
LH ++H D+K N+LL + + A + DFG A L +S ++ ++ G+
Sbjct: 180 LHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI-PGTET 235
Query: 814 YVPPEYGLGERPSTAGDVPTS 834
++ PE +G+ D+ +S
Sbjct: 236 HMAPEVVMGKPCDAKVDIWSS 256
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 37.0 bits (84), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
+I ALDY H+ + ++H D+KP N+++D E ++ D+GLA F
Sbjct: 139 EILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 37.0 bits (84), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
+I ALDY H+ + ++H D+KP N+++D E ++ D+GLA F
Sbjct: 139 EILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 14/85 (16%)
Query: 742 RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA--KVGDFGLARFLLERVDNQ 799
RK I LD LH + ++H DLKP NILL ++ + KV DFG + + +RV
Sbjct: 203 RKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV--- 256
Query: 800 SSISSTHVFMGSIGYVPPEYGLGER 824
+ + S Y PE LG R
Sbjct: 257 ------YTXIQSRFYRAPEVILGAR 275
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 60/144 (41%), Gaps = 10/144 (6%)
Query: 118 LFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGK 177
L +L LN+ +N LQ LTEL L L N++ + +L L L G
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGG 116
Query: 178 NLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLG 237
N L S+P + RL LK L L N+L +T+L L L++NQL
Sbjct: 117 NQL-KSLPSGV-------FDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL- 167
Query: 238 GEIPYDVRDTLPNLLDFIYCFNRF 261
+P+ D L L N+F
Sbjct: 168 QSVPHGAFDRLGKLQTITLFGNQF 191
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 52/135 (38%), Gaps = 25/135 (18%)
Query: 328 THLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYN 387
T L L L NQ +P + + +L KLYLGGN + RL L L L+ N
Sbjct: 83 TELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTN 141
Query: 388 SISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGN 447
+ IP G + L NL+ L+ LS N+L +F
Sbjct: 142 QL---------------------QSIPAGAFDKLTNLQTLS---LSTNQLQSVPHGAFDR 177
Query: 448 FQSLLSIDLSNNRIN 462
L +I L N+ +
Sbjct: 178 LGKLQTITLFGNQFD 192
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 16/159 (10%)
Query: 411 NEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGIL 470
+ +P GIP A+ +KL DL L +F L ++L N++ + G+
Sbjct: 27 DSVPSGIP---ADTEKL---DLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSAGVF 79
Query: 471 RPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKG 530
L E + T+ L++N L+ + L++L + NQ + L
Sbjct: 80 DDLTE-------LGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTK 132
Query: 531 LEVLDLSSNKLSGSIPSD-LQNLQALRSLNLTFNNLEGV 568
L+ L L++N+L SIP+ L L++L+L+ N L+ V
Sbjct: 133 LKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSV 170
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
+I ALDY H+ + ++H D+KP N+++D E ++ D+GLA F
Sbjct: 139 EILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 64/166 (38%), Gaps = 48/166 (28%)
Query: 669 IGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNV-RHRNLV 705
+G G+FG V+ + G ++ ++E + L ++ H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 706 KLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHND------- 758
L+ +C+ L ++ EF G+L ++ +R + A + L+ D
Sbjct: 95 NLLGACTKPGGP----LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 759 --------------CEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+H DL NILL E+ K+ DFGLAR
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
+I ALDY H+ + ++H D+KP N+++D E ++ D+GLA F
Sbjct: 139 EILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 723 ALVYEFLSNGSLGDWI-----HGERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE 777
ALV+E ++N + R +I ALDY H+ + ++H D+KP N+++D
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDH 166
Query: 778 EMTA-KVGDFGLARF 791
E ++ D+GLA F
Sbjct: 167 EHRKLRLIDWGLAEF 181
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 746 LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFL 792
+I ALDY H+ + ++H D+KP N+++D E ++ D+GLA F
Sbjct: 137 YEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 181
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 48/173 (27%)
Query: 669 IGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNV-RHRNLV 705
+G G+FG V+ + G ++ ++E + L ++ H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 706 KLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHND------- 758
L+ +C+ L ++ EF G+L ++ +R + A + L+ D
Sbjct: 95 NLLGACTKPGGP----LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 759 --------------CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797
+H DL NILL E+ K+ DFGLAR + + D
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 203
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 746 LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARFL 792
+I ALDY H+ + ++H D+KP N+++D E ++ D+GLA F
Sbjct: 137 YEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 181
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
+I ALDY H+ + ++H D+KP N+++D E ++ D+GLA F
Sbjct: 139 EILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 14/85 (16%)
Query: 742 RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA--KVGDFGLARFLLERVDNQ 799
RK I LD LH + ++H DLKP NILL ++ + KV DFG + + +RV
Sbjct: 203 RKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV--- 256
Query: 800 SSISSTHVFMGSIGYVPPEYGLGER 824
+ + S Y PE LG R
Sbjct: 257 ------YTXIQSRFYRAPEVILGAR 275
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
+I ALDY H+ + ++H D+KP N+++D E ++ D+GLA F
Sbjct: 139 EILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 48/173 (27%)
Query: 669 IGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNV-RHRNLV 705
+G G+FG V+ + G ++ ++E + L ++ H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 706 KLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHND------- 758
L+ +C+ L ++ EF G+L ++ +R + A + L+ D
Sbjct: 95 NLLGACTKPGGP----LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 759 --------------CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797
+H DL NILL E+ K+ DFGLAR + + D
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 203
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
+I ALDY H+ + ++H D+KP N+++D E ++ D+GLA F
Sbjct: 139 EILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 64/166 (38%), Gaps = 48/166 (28%)
Query: 669 IGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNV-RHRNLV 705
+G G+FG V+ + G ++ ++E + L ++ H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 706 KLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHND------- 758
L+ +C+ L ++ EF G+L ++ +R + A + L+ D
Sbjct: 86 NLLGACTKPGGP----LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 759 --------------CEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+H DL NILL E+ K+ DFGLAR
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
+I ALDY H+ + ++H D+KP N+++D E ++ D+GLA F
Sbjct: 144 EILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 186
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA-KVGDFGLARF 791
+I ALDY H+ + ++H D+KP N+++D E ++ D+GLA F
Sbjct: 137 EILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 179
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 27/139 (19%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-HGERKNELDITS 750
E LR V H N++ L +N + L+ E +S G L D++ E +E + TS
Sbjct: 65 EVSILRQVLHPNIITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 751 -------ALDYLHNDCEVPVVHSDLKPGNI-LLDEEM---TAKVGDFGLARFLLERVDNQ 799
++YLH + H DLKP NI LLD+ + K+ DFGLA + +
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH------EIE 170
Query: 800 SSISSTHVFMGSIGYVPPE 818
+ ++F G+ +V PE
Sbjct: 171 DGVEFKNIF-GTPEFVAPE 188
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 746 LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVG--DFGLA-RFLLERVDNQSSI 802
L I L+Y+H E VH D+K N+LL+ + +V D+GLA R+ E V +
Sbjct: 159 LRILDILEYIH---EHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKE 215
Query: 803 SSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLP 852
G+I + + G PS GD+ G + +++W+ +LP
Sbjct: 216 DPKRCHDGTIEFTSIDAHNGVAPSRRGDL----EILG-YCMIQWLTGHLP 260
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 48/173 (27%)
Query: 669 IGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNV-RHRNLV 705
+G G+FG V+ + G ++ ++E + L ++ H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 706 KLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHND------- 758
L+ +C+ L ++ EF G+L ++ +R + A + L+ D
Sbjct: 86 NLLGACTKPGGP----LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 759 --------------CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797
+H DL NILL E+ K+ DFGLAR + + D
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 194
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 746 LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVG--DFGLA-RFLLERVDNQSSI 802
L I L+Y+H E VH D+K N+LL+ + +V D+GLA R+ E V +
Sbjct: 159 LRILDILEYIH---EHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKE 215
Query: 803 SSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLP 852
G+I + + G PS GD+ G + +++W+ +LP
Sbjct: 216 DPKRCHDGTIEFTSIDAHNGVAPSRRGDL----EILG-YCMIQWLTGHLP 260
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 47/165 (28%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-------------------------KSFIAECETL 696
F ++GSG+FG+V G W K + E +
Sbjct: 50 EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVM 105
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELD 747
+V + ++ +L+ C + + L+ + + G L D++ + N +
Sbjct: 106 ASVDNPHVCRLLGICLT------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 159
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I ++YL + +VH DL N+L+ K+ DFGLA+ L
Sbjct: 160 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 201
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 48/173 (27%)
Query: 669 IGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNV-RHRNLV 705
+G G+FG V+ + G ++ ++E + L ++ H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 706 KLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHND------- 758
L+ +C+ L ++ EF G+L ++ +R + A + L+ D
Sbjct: 86 NLLGACTKPGGP----LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 759 --------------CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797
+H DL NILL E+ K+ DFGLAR + + D
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 194
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 36.6 bits (83), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 746 LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVG--DFGLA-RFLLERVDNQSSI 802
L I L+Y+H E VH D+K N+LL+ + +V D+GLA R+ E V +
Sbjct: 159 LRILDILEYIH---EHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAA 215
Query: 803 SSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLP 852
G+I + + G PS GD+ G + +++W+ +LP
Sbjct: 216 DPKRCHDGTIEFTSIDAHNGVAPSRRGDL----EILG-YCMIQWLTGHLP 260
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 64/166 (38%), Gaps = 48/166 (28%)
Query: 669 IGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNV-RHRNLV 705
+G G+FG V+ + G ++ ++E + L ++ H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 706 KLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHND------- 758
L+ +C+ L ++ EF G+L ++ +R + A + L+ D
Sbjct: 86 NLLGACTKPGGP----LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 759 --------------CEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790
+H DL NILL E+ K+ DFGLAR
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 36.6 bits (83), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 47/165 (28%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-------------------------KSFIAECETL 696
F ++GSG+FG+V G W K + E +
Sbjct: 20 EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELD 747
+V + ++ +L+ C + + L+ + + G L D++ + N +
Sbjct: 76 ASVDNPHVCRLLGICLT------STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 129
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I ++YL + +VH DL N+L+ K+ DFGLA+ L
Sbjct: 130 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 171
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 36.6 bits (83), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 47/165 (28%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-------------------------KSFIAECETL 696
F ++GSG+FG+V G W K + E +
Sbjct: 16 EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELD 747
+V + ++ +L+ C + + L+ + + G L D++ + N +
Sbjct: 72 ASVDNPHVCRLLGICLT------STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I ++YL + +VH DL N+L+ K+ DFGLA+ L
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 85/186 (45%), Gaps = 39/186 (20%)
Query: 662 NFSHENLIGSGSFGSV-------------LHNERTGSWKSFIAECETLRNVR-HRNLVKL 707
NF ++G+G++G V L+ + + + + +T + R R +++
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 708 ITSCSSLDSKNMEF-----LALVYEFLSNGSLGDWIHGERKNEL----------DITSAL 752
I L + + F L L+ ++++ G L + H ++ +I AL
Sbjct: 115 IRQSPFLVTLHYAFQTETKLHLILDYINGGEL--FTHLSQRERFTEHEVQIYVGEIVLAL 172
Query: 753 DYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSI 812
++LH ++ +++ D+K NILLD + DFGL++ E V +++ + F G+I
Sbjct: 173 EHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSK---EFVADET--ERAYDFCGTI 224
Query: 813 GYVPPE 818
Y+ P+
Sbjct: 225 EYMAPD 230
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 47/165 (28%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-------------------------KSFIAECETL 696
F ++GSG+FG+V G W K + E +
Sbjct: 18 EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELD 747
+V + ++ +L+ C + + L+ + + G L D++ + N +
Sbjct: 74 ASVDNPHVCRLLGICLT------STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 127
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I ++YL + +VH DL N+L+ K+ DFGLA+ L
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 169
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 47/165 (28%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-------------------------KSFIAECETL 696
F ++GSG+FG+V G W K + E +
Sbjct: 17 EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELD 747
+V + ++ +L+ C + + L+ + + G L D++ + N +
Sbjct: 73 ASVDNPHVCRLLGICLT------STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 126
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I ++YL + +VH DL N+L+ K+ DFGLA+ L
Sbjct: 127 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 168
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 47/165 (28%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-------------------------KSFIAECETL 696
F ++GSG+FG+V G W K + E +
Sbjct: 19 EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELD 747
+V + ++ +L+ C + + L+ + + G L D++ + N +
Sbjct: 75 ASVDNPHVCRLLGICLT------STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 128
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I ++YL + +VH DL N+L+ K+ DFGLA+ L
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 14/85 (16%)
Query: 742 RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA--KVGDFGLARFLLERVDNQ 799
RK I LD LH + ++H DLKP NILL ++ + KV DFG + + +RV
Sbjct: 203 RKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV--- 256
Query: 800 SSISSTHVFMGSIGYVPPEYGLGER 824
+ + S Y PE LG R
Sbjct: 257 ------YXXIQSRFYRAPEVILGAR 275
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 36.2 bits (82), Expect = 0.085, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 11/99 (11%)
Query: 764 VHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE 823
VH DL N ++ + T K+GDFG+ R + E + G G +P + E
Sbjct: 149 VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRK---------GGKGLLPVRWMAPE 199
Query: 824 RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE 862
S V T+ S F +V W ++L E Q L E
Sbjct: 200 --SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 236
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 47/165 (28%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-------------------------KSFIAECETL 696
F ++GSG+FG+V G W K + E +
Sbjct: 26 EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 81
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELD 747
+V + ++ +L+ C + + L+ + + G L D++ + N +
Sbjct: 82 ASVDNPHVCRLLGICLT------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 135
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I ++YL + +VH DL N+L+ K+ DFGLA+ L
Sbjct: 136 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 177
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 36.2 bits (82), Expect = 0.086, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 11/99 (11%)
Query: 764 VHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE 823
VH DL N ++ + T K+GDFG+ R + E + G G +P + E
Sbjct: 152 VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRK---------GGKGLLPVRWMAPE 202
Query: 824 RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE 862
S V T+ S F +V W ++L E Q L E
Sbjct: 203 --SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 36.2 bits (82), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 47/165 (28%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-------------------------KSFIAECETL 696
F ++GSG+FG+V G W K + E +
Sbjct: 17 EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELD 747
+V + ++ +L+ C + + L+ + + G L D++ + N +
Sbjct: 73 ASVDNPHVCRLLGICLT------STVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ 126
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I ++YL + +VH DL N+L+ K+ DFGLA+ L
Sbjct: 127 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 168
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 36.2 bits (82), Expect = 0.089, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 11/99 (11%)
Query: 764 VHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE 823
VH DL N ++ + T K+GDFG+ R + E + G G +P + E
Sbjct: 152 VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRK---------GGKGLLPVRWMAPE 202
Query: 824 RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE 862
S V T+ S F +V W ++L E Q L E
Sbjct: 203 --SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 36.2 bits (82), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 47/165 (28%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-------------------------KSFIAECETL 696
F ++GSG+FG+V G W K + E +
Sbjct: 16 EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELD 747
+V + ++ +L+ C + + L+ + + G L D++ + N +
Sbjct: 72 ASVDNPHVCRLLGICLT------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I ++YL + +VH DL N+L+ K+ DFGLA+ L
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 36.2 bits (82), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 711 CSSLDSKNME-FLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCEVPVVHSDLK 769
C L S + + F VY L + + + I G K L AL++L + + ++H D+K
Sbjct: 99 CMELMSTSFDKFYKYVYSVLDD-VIPEEILG--KITLATVKALNHLKEN--LKIIHRDIK 153
Query: 770 PGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAG 829
P NILLD K+ DFG++ L++ SI+ T G Y+ PE
Sbjct: 154 PSNILLDRSGNIKLCDFGISGQLVD------SIAKTRD-AGCRPYMAPERIDPSASRQGY 206
Query: 830 DVPTS---------ESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873
DV + E G F KW +++ + + QV+ + QL S E +
Sbjct: 207 DVRSDVWSLGITLYELATGRFPYPKW--NSVFDQLTQVVKGDPPQLSNSEERE 257
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 36.2 bits (82), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 47/165 (28%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-------------------------KSFIAECETL 696
F ++GSG+FG+V G W K + E +
Sbjct: 16 EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELD 747
+V + ++ +L+ C + + L+ + + G L D++ + N +
Sbjct: 72 ASVDNPHVCRLLGICLT------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I ++YL + +VH DL N+L+ K+ DFGLA+ L
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 36.2 bits (82), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 47/165 (28%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-------------------------KSFIAECETL 696
F ++GSG+FG+V G W K + E +
Sbjct: 18 EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELD 747
+V + ++ +L+ C + + L+ + + G L D++ + N +
Sbjct: 74 ASVDNPHVCRLLGICLT------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 127
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I ++YL + +VH DL N+L+ K+ DFGLA+ L
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 169
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 47/165 (28%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-------------------------KSFIAECETL 696
F ++GSG+FG+V G W K + E +
Sbjct: 23 EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELD 747
+V + ++ +L+ C + + L+ + + G L D++ + N +
Sbjct: 79 ASVDNPHVCRLLGICLT------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 132
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I ++YL + +VH DL N+L+ K+ DFGLA+ L
Sbjct: 133 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 47/165 (28%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-------------------------KSFIAECETL 696
F ++GSG+FG+V G W K + E +
Sbjct: 19 EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELD 747
+V + ++ +L+ C + + L+ + + G L D++ + N +
Sbjct: 75 ASVDNPHVCRLLGICLT------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 128
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I ++YL + +VH DL N+L+ K+ DFGLA+ L
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 47/165 (28%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-------------------------KSFIAECETL 696
F ++GSG+FG+V G W K + E +
Sbjct: 19 EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELD 747
+V + ++ +L+ C + + L+ + + G L D++ + N +
Sbjct: 75 ASVDNPHVCRLLGICLT------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 128
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I ++YL + +VH DL N+L+ K+ DFGLA+ L
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 47/165 (28%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-------------------------KSFIAECETL 696
F ++GSG+FG+V G W K + E +
Sbjct: 22 EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 77
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELD 747
+V + ++ +L+ C + + L+ + + G L D++ + N +
Sbjct: 78 ASVDNPHVCRLLGICLT------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 131
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I ++YL + +VH DL N+L+ K+ DFGLA+ L
Sbjct: 132 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 173
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 47/165 (28%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-------------------------KSFIAECETL 696
F ++GSG+FG+V G W K + E +
Sbjct: 19 EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELD 747
+V + ++ +L+ C + + L+ + + G L D++ + N +
Sbjct: 75 ASVDNPHVCRLLGICLT------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 128
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I ++YL + +VH DL N+L+ K+ DFGLA+ L
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 47/165 (28%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-------------------------KSFIAECETL 696
F ++GSG+FG+V G W K + E +
Sbjct: 41 EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 96
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELD 747
+V + ++ +L+ C + + L+ + + G L D++ + N +
Sbjct: 97 ASVDNPHVCRLLGICLT------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 150
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I ++YL + +VH DL N+L+ K+ DFGLA+ L
Sbjct: 151 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 192
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 47/165 (28%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-------------------------KSFIAECETL 696
F ++GSG+FG+V G W K + E +
Sbjct: 13 EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 68
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELD 747
+V + ++ +L+ C + + L+ + + G L D++ + N +
Sbjct: 69 ASVDNPHVCRLLGICLT------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 122
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I ++YL + +VH DL N+L+ K+ DFGLA+ L
Sbjct: 123 IAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 164
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 47/165 (28%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-------------------------KSFIAECETL 696
F ++GSG+FG+V G W K + E +
Sbjct: 16 EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELD 747
+V + ++ +L+ C + + L+ + + G L D++ + N +
Sbjct: 72 ASVDNPHVCRLLGICLT------STVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I ++YL + +VH DL N+L+ K+ DFGLA+ L
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 47/165 (28%)
Query: 662 NFSHENLIGSGSFGSVLHNERTGSW-------------------------KSFIAECETL 696
F ++GSG+FG+V G W K + E +
Sbjct: 10 EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 65
Query: 697 RNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN---------ELD 747
+V + ++ +L+ C + + L+ + + G L D++ + N +
Sbjct: 66 ASVDNPHVCRLLGICLT------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 119
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792
I ++YL + +VH DL N+L+ K+ DFGLA+ L
Sbjct: 120 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 161
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 22/115 (19%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-----HGERKNEL---D 747
LR +H N++ L D K+ + LV E + G L D I ER+
Sbjct: 75 LRYGQHPNIITLKDVYD--DGKH---VYLVTELMRGGELLDKILRQKFFSEREASFVLHT 129
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEM----TAKVGDFGLARFLLERVDN 798
I ++YLH+ VVH DLKP NIL +E ++ DFG A+ L R +N
Sbjct: 130 IGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQL--RAEN 179
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 113/285 (39%), Gaps = 50/285 (17%)
Query: 330 LNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKI-PASIGRLRSLTLLDLSYNS 388
L L L N+FE S NF + L+ L + GN ++ + L +L LDLS++
Sbjct: 303 LKKLVLSANKFENLCQISASNFPS-LTHLSIKGNTKRLELGTGCLENLENLRELDLSHDD 361
Query: 389 ISGEIPIEIXXXXXXXXXXXXXNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNF 448
I E L NL L ++LS NE +F
Sbjct: 362 I----------------------ETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKEC 399
Query: 449 QSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVT--IDLSDNSLSGNLP-------- 498
L +DL+ R+ + + L + ++ N+ +D+S L LP
Sbjct: 400 PQLELLDLAFTRLKVKDAQSPFQNL--HLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQ 457
Query: 499 ------------NSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIP 546
NSL+ LE L++++ S + LK + +DLS N+L+ S
Sbjct: 458 GNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSI 517
Query: 547 SDLQNLQALRSLNLTFNNLEGVVPS-EGIFRNMSNVHLKGNPKLC 590
L +L+ + LNL N++ ++PS I ++L+ NP C
Sbjct: 518 EALSHLKGIY-LNLASNHISIILPSLLPILSQQRTINLRQNPLDC 561
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 78/186 (41%), Gaps = 40/186 (21%)
Query: 411 NEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGIL 470
NEIPG +PNS L + S N L +F +L +DL+ +I I
Sbjct: 25 NEIPGTLPNSTECL------EFSFNVLPTIQNTTFSRLINLTFLDLTRCQI-----YWIH 73
Query: 471 RPLPEEISRLENVV-----TIDLSDNSLSGNLPNSLK------------------NCKSL 507
+ RL+ +V I +++ +LSG P +LK N K+L
Sbjct: 74 EDTFQSQHRLDTLVLTANPLIFMAETALSG--PKALKHLFFIQTGISSIDFIPLHNQKTL 131
Query: 508 EELLMAYNQFSG-PIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALR--SLNLTFNN 564
E L + N S +P K L+VLD +N + D+ +LQ SLNL N+
Sbjct: 132 ESLYLGSNHISSIKLPKGFPTEK-LKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGND 190
Query: 565 LEGVVP 570
+ G+ P
Sbjct: 191 IAGIEP 196
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 91 IGNLSFLRSIQLQNNKL--SGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKML 148
+ NL LR + L ++ + S ++ NL L+ LN+S+N + +L++L
Sbjct: 346 LENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELL 405
Query: 149 DLMANKITGRVTDDQLRNLRSLQVLNFGKNLL 180
DL ++ + +NL L+VLN +LL
Sbjct: 406 DLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLL 437
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 22/115 (19%)
Query: 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-----HGERKNEL---D 747
LR +H N++ L D K+ + LV E + G L D I ER+
Sbjct: 75 LRYGQHPNIITLKDVYD--DGKH---VYLVTELMRGGELLDKILRQKFFSEREASFVLHT 129
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEM----TAKVGDFGLARFLLERVDN 798
I ++YLH+ VVH DLKP NIL +E ++ DFG A+ L R +N
Sbjct: 130 IGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQL--RAEN 179
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788
D AL +LH+ +VH D+KP NI L K+GDFGL
Sbjct: 165 DTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGL 203
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
A+D +H ++ VH D+KP N+LLD ++ DFG ++++ ++ S+ V +G
Sbjct: 187 AIDSIH---QLHYVHRDIKPDNVLLDVNGHIRLADFGSCL----KMNDDGTVQSS-VAVG 238
Query: 811 SIGYVPPE 818
+ Y+ PE
Sbjct: 239 TPDYISPE 246
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 751 ALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG 810
A+D +H ++ VH D+KP N+LLD ++ DFG ++++ ++ S+ V +G
Sbjct: 203 AIDSIH---QLHYVHRDIKPDNVLLDVNGHIRLADFGSCL----KMNDDGTVQSS-VAVG 254
Query: 811 SIGYVPPE 818
+ Y+ PE
Sbjct: 255 TPDYISPE 262
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.4 bits (80), Expect = 0.16, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 11/99 (11%)
Query: 764 VHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE 823
VH +L N ++ + T K+GDFG+ R + E + + G G +P + E
Sbjct: 152 VHRNLAARNCMVAHDFTVKIGDFGMTRDIYE---------TDYYRKGGKGLLPVRWMAPE 202
Query: 824 RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE 862
S V T+ S F +V W ++L E Q L E
Sbjct: 203 --SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 23/113 (20%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSL---------GDWIHGER 742
E ++H ++V+L+ + SS D L +V+EF+ L +++ E
Sbjct: 76 EASICHMLKHPHIVELLETYSS-DG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEA 130
Query: 743 ---KNELDITSALDYLHNDCEVPVVHSDLKPGNILL---DEEMTAKVGDFGLA 789
I AL Y H++ ++H D+KP N+LL + K+GDFG+A
Sbjct: 131 VASHYMRQILEALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVA 180
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 35.4 bits (80), Expect = 0.16, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 11/99 (11%)
Query: 764 VHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE 823
VH +L N ++ + T K+GDFG+ R + E + + G G +P + E
Sbjct: 153 VHRNLAARNCMVAHDFTVKIGDFGMTRDIYE---------TDYYRKGGKGLLPVRWMAPE 203
Query: 824 RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE 862
S V T+ S F +V W ++L E Q L E
Sbjct: 204 --SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 240
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 26/159 (16%)
Query: 419 NSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEIS 478
+ A+ L +++L+ N ++ P +F N +L ++ L +NR+ IP G+ +
Sbjct: 50 DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL-IPLGVF-------T 101
Query: 479 RLENVVTIDLSDNS---LSGNLPNSLKNCKSLEE-----LLMAYNQFSGPIPNIVAELKG 530
L N+ +D+S+N L + L N KSLE + +++ FSG L
Sbjct: 102 GLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSG--------LNS 153
Query: 531 LEVLDLSSNKLSGSIPSD-LQNLQALRSLNLTFNNLEGV 568
LE L L L+ SIP++ L +L L L L N+ +
Sbjct: 154 LEQLTLEKCNLT-SIPTEALSHLHGLIVLRLRHLNINAI 191
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 108/287 (37%), Gaps = 64/287 (22%)
Query: 71 NRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNN 130
NR+ LN F PH L ++L N +S P NLF LR L + N
Sbjct: 42 NRIKTLNQDEFA----SFPH------LEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91
Query: 131 LQGELPVNI-SKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLL--------- 180
L+ +P+ + + L+ L LD+ NKI + D ++L +L+ L G N L
Sbjct: 92 LK-LIPLGVFTGLSNLTKLDISENKIVI-LLDYMFQDLYNLKSLEVGDNDLVYISHRAFS 149
Query: 181 --------------WGSIPP-----------------SIANLIPSDLSRLENLKVLDLT- 208
SIP +I + RL LKVL+++
Sbjct: 150 GLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISH 209
Query: 209 INRLAGTVPSTIY--NMTSL--VHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGK 264
L P+ +Y N+TSL H L + +PY L L +N +
Sbjct: 210 WPYLDTMTPNCLYGLNLTSLSITHCNLTA------VPYLAVRHLVYLRFLNLSYNPISTI 263
Query: 265 IPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVS 311
LH L +Q I++ L P L +LR N+ N++ +
Sbjct: 264 EGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTT 310
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 35.0 bits (79), Expect = 0.17, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 20/110 (18%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-HGERKNELDITS 750
E L+ ++H N++ L +N + L+ E ++ G L D++ E E + T
Sbjct: 64 EVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 751 ALD-------YLHNDCEVPVVHSDLKPGNI-LLDEEMTA---KVGDFGLA 789
L YLH+ + + H DLKP NI LLD + K+ DFGLA
Sbjct: 119 FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 87/210 (41%), Gaps = 48/210 (22%)
Query: 657 RRATGNFSHENLIGSGSFGSV-LHNERTGSWKSFIAEC--------------ETLRNVRH 701
R+ F E + G G+FG+V L E++ I + + L + H
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHH 78
Query: 702 RNLVKLITSCSSLDSKNME--FLALVYEFLSNGSLGDWIHGERKNE-------------- 745
N+V+L + +L ++ +L +V E++ D +H +N
Sbjct: 79 PNIVQLQSYFYTLGERDRRDIYLNVVMEYVP-----DTLHRCCRNYYRRQVAPPPILIKV 133
Query: 746 --LDITSALDYLHNDCEVPVVHSDLKPGNILLDE-EMTAKVGDFGLARFLLERVDNQSSI 802
+ ++ LH V V H D+KP N+L++E + T K+ DFG A+ L N + I
Sbjct: 134 FLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYI 192
Query: 803 SSTHVFMGSIGYVPPEYGLG-ERPSTAGDV 831
S + Y PE G + +TA D+
Sbjct: 193 CSRY-------YRAPELIFGNQHYTTAVDI 215
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 20/84 (23%)
Query: 748 ITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807
+ LDYLH C + +H+D+KP NILL V + + R E + Q S
Sbjct: 139 VLQGLDYLHTKCRI--IHTDIKPENILLS------VNEQYIRRLAAEATEWQRS------ 184
Query: 808 FMGSIGYVPPE-YGLGERPSTAGD 830
G PP + P+TAG+
Sbjct: 185 -----GAPPPSGSAVSTAPATAGN 203
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 35.0 bits (79), Expect = 0.20, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 20/110 (18%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-HGERKNELDITS 750
E L+ ++H N++ L +N + L+ E ++ G L D++ E E + T
Sbjct: 63 EVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATE 117
Query: 751 ALD-------YLHNDCEVPVVHSDLKPGNI-LLDEEMTA---KVGDFGLA 789
L YLH+ + + H DLKP NI LLD + K+ DFGLA
Sbjct: 118 FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 35.0 bits (79), Expect = 0.21, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 20/110 (18%)
Query: 692 ECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWI-HGERKNELDITS 750
E L+ ++H N++ L +N + L+ E ++ G L D++ E E + T
Sbjct: 63 EVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATE 117
Query: 751 ALD-------YLHNDCEVPVVHSDLKPGNI-LLDEEMTA---KVGDFGLA 789
L YLH+ + + H DLKP NI LLD + K+ DFGLA
Sbjct: 118 FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,289,913
Number of Sequences: 62578
Number of extensions: 1093526
Number of successful extensions: 4837
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 289
Number of HSP's that attempted gapping in prelim test: 2643
Number of HSP's gapped (non-prelim): 1584
length of query: 929
length of database: 14,973,337
effective HSP length: 108
effective length of query: 821
effective length of database: 8,214,913
effective search space: 6744443573
effective search space used: 6744443573
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)