Query 002376
Match_columns 929
No_of_seqs 996 out of 5504
Neff 9.1
Searched_HMMs 46136
Date Thu Mar 28 22:38:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002376.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002376hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1E-107 2E-112 1033.9 55.4 851 26-920 27-958 (968)
2 PLN00113 leucine-rich repeat r 100.0 2.1E-58 4.6E-63 584.2 32.9 485 95-593 69-588 (968)
3 KOG1187 Serine/threonine prote 100.0 9.1E-45 2E-49 399.4 13.6 252 647-916 61-355 (361)
4 KOG4194 Membrane glycoprotein 100.0 2.3E-42 5E-47 370.0 7.5 370 146-540 81-450 (873)
5 KOG0472 Leucine-rich repeat pr 100.0 2.5E-45 5.4E-50 377.2 -16.5 473 73-588 47-540 (565)
6 KOG0472 Leucine-rich repeat pr 100.0 2.1E-43 4.6E-48 363.0 -9.7 456 95-593 45-522 (565)
7 KOG0192 Tyrosine kinase specif 100.0 1.7E-40 3.8E-45 362.3 12.0 232 666-919 46-309 (362)
8 KOG4194 Membrane glycoprotein 100.0 9E-41 1.9E-45 357.8 7.7 366 97-490 80-448 (873)
9 KOG0581 Mitogen-activated prot 100.0 2E-40 4.4E-45 342.4 8.7 232 650-908 75-334 (364)
10 KOG0197 Tyrosine kinases [Sign 100.0 8.9E-39 1.9E-43 346.0 9.0 232 664-916 209-464 (468)
11 KOG0615 Serine/threonine prote 100.0 9.6E-38 2.1E-42 323.9 11.5 226 661-908 172-436 (475)
12 KOG1026 Nerve growth factor re 100.0 5.2E-38 1.1E-42 356.0 10.1 237 662-918 487-767 (774)
13 KOG0591 NIMA (never in mitosis 100.0 2.3E-39 4.9E-44 319.4 -3.1 230 662-910 20-282 (375)
14 KOG0595 Serine/threonine-prote 100.0 7.4E-38 1.6E-42 325.7 6.5 175 660-849 9-215 (429)
15 KOG0575 Polo-like serine/threo 100.0 2.4E-37 5.3E-42 337.5 9.7 224 661-908 18-268 (592)
16 KOG0193 Serine/threonine prote 100.0 8.7E-37 1.9E-41 330.9 7.0 247 654-918 385-658 (678)
17 KOG0618 Serine/threonine phosp 100.0 2.6E-38 5.6E-43 356.8 -5.5 465 73-589 23-489 (1081)
18 KOG0196 Tyrosine kinase, EPH ( 100.0 2.9E-36 6.2E-41 333.8 9.2 236 663-917 631-895 (996)
19 KOG4721 Serine/threonine prote 100.0 1.2E-36 2.6E-41 324.8 5.9 267 614-916 88-371 (904)
20 KOG0444 Cytoskeletal regulator 100.0 2E-37 4.3E-42 333.3 -2.6 370 92-541 4-374 (1255)
21 KOG0582 Ste20-like serine/thre 100.0 4.9E-36 1.1E-40 314.1 7.6 233 660-908 25-292 (516)
22 KOG0198 MEKK and related serin 100.0 3.2E-35 6.9E-40 310.8 12.2 233 661-909 17-276 (313)
23 KOG0444 Cytoskeletal regulator 100.0 3.1E-37 6.8E-42 331.8 -3.2 330 193-570 48-379 (1255)
24 KOG0598 Ribosomal protein S6 k 100.0 6.9E-36 1.5E-40 308.9 5.8 219 660-901 24-269 (357)
25 KOG0194 Protein tyrosine kinas 100.0 1.5E-35 3.2E-40 326.7 7.5 239 657-918 153-425 (474)
26 KOG0593 Predicted protein kina 100.0 7.7E-36 1.7E-40 297.5 4.1 233 661-907 2-282 (396)
27 KOG1095 Protein tyrosine kinas 100.0 2.8E-35 6.1E-40 346.0 7.6 239 661-920 692-968 (1025)
28 KOG0661 MAPK related serine/th 100.0 5.5E-36 1.2E-40 316.1 1.0 234 660-909 9-291 (538)
29 KOG0592 3-phosphoinositide-dep 100.0 5.3E-35 1.2E-39 313.4 8.2 233 657-909 69-338 (604)
30 KOG0600 Cdc2-related protein k 100.0 5.4E-35 1.2E-39 310.9 7.9 172 661-844 117-316 (560)
31 KOG0578 p21-activated serine/t 100.0 6.5E-35 1.4E-39 316.1 7.3 226 662-908 274-522 (550)
32 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.6E-34 3.4E-39 322.2 9.0 237 660-915 6-336 (338)
33 KOG4278 Protein tyrosine kinas 100.0 1.3E-34 2.8E-39 311.3 5.0 240 654-915 260-525 (1157)
34 KOG0585 Ca2+/calmodulin-depend 100.0 5.1E-34 1.1E-38 300.6 7.9 237 657-908 93-371 (576)
35 KOG0618 Serine/threonine phosp 100.0 3E-36 6.5E-41 340.2 -9.5 462 76-589 3-465 (1081)
36 KOG0201 Serine/threonine prote 100.0 8.1E-35 1.8E-39 305.2 1.7 224 661-908 13-262 (467)
37 cd05096 PTKc_DDR1 Catalytic do 100.0 7.1E-34 1.5E-38 312.0 7.6 237 661-912 5-304 (304)
38 KOG0583 Serine/threonine prote 100.0 1.2E-33 2.6E-38 312.0 8.0 226 658-907 14-273 (370)
39 KOG0659 Cdk activating kinase 100.0 2.1E-33 4.5E-38 275.9 6.5 232 661-909 2-281 (318)
40 KOG3653 Transforming growth fa 100.0 3.6E-33 7.8E-38 294.7 8.4 251 662-918 211-508 (534)
41 KOG0616 cAMP-dependent protein 100.0 1.2E-33 2.7E-38 281.6 4.5 213 661-900 44-283 (355)
42 KOG0597 Serine-threonine prote 100.0 8.4E-34 1.8E-38 303.6 3.3 223 661-908 2-250 (808)
43 KOG0658 Glycogen synthase kina 100.0 3.9E-34 8.4E-39 295.2 -0.1 243 661-915 24-314 (364)
44 KOG0663 Protein kinase PITSLRE 100.0 1.3E-33 2.9E-38 285.3 2.3 171 660-843 75-273 (419)
45 KOG0589 Serine/threonine prote 100.0 6.4E-33 1.4E-37 300.0 6.8 227 661-909 4-258 (426)
46 cd05104 PTKc_Kit Catalytic dom 100.0 6.5E-33 1.4E-37 312.7 7.1 234 660-913 34-374 (375)
47 KOG1094 Discoidin domain recep 100.0 3.7E-33 8E-38 299.7 4.3 237 662-913 539-804 (807)
48 PHA02988 hypothetical protein; 100.0 2.5E-32 5.3E-37 296.1 10.7 241 650-915 14-281 (283)
49 KOG0588 Serine/threonine prote 100.0 6.2E-33 1.3E-37 303.4 5.9 224 661-909 12-263 (786)
50 KOG4279 Serine/threonine prote 100.0 1.3E-32 2.8E-37 299.5 7.9 221 667-908 581-831 (1226)
51 cd05631 STKc_GRK4 Catalytic do 100.0 2.4E-32 5.1E-37 296.9 8.9 245 662-928 1-284 (285)
52 KOG0584 Serine/threonine prote 100.0 1.5E-32 3.2E-37 300.5 7.2 222 666-908 45-295 (632)
53 KOG0033 Ca2+/calmodulin-depend 100.0 7.9E-33 1.7E-37 267.7 4.2 228 660-908 10-266 (355)
54 cd05106 PTKc_CSF-1R Catalytic 100.0 1.4E-32 3.1E-37 309.6 6.7 236 659-914 36-373 (374)
55 KOG4257 Focal adhesion tyrosin 100.0 7.4E-33 1.6E-37 298.7 3.6 232 662-915 390-651 (974)
56 KOG0611 Predicted serine/threo 100.0 1.9E-32 4.1E-37 281.9 5.5 222 662-909 54-303 (668)
57 KOG0580 Serine/threonine prote 100.0 6.9E-33 1.5E-37 268.5 1.9 224 659-908 20-272 (281)
58 cd06649 PKc_MEK2 Catalytic dom 100.0 5.3E-32 1.1E-36 300.6 9.1 174 660-848 4-202 (331)
59 cd05571 STKc_PKB Catalytic dom 100.0 1.6E-31 3.5E-36 295.6 12.8 218 667-908 1-250 (323)
60 KOG0660 Mitogen-activated prot 100.0 5.1E-32 1.1E-36 279.1 7.8 241 659-908 20-309 (359)
61 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.4E-32 5.1E-37 293.8 5.6 231 661-913 5-265 (266)
62 KOG2345 Serine/threonine prote 100.0 2.7E-32 5.8E-37 265.5 4.6 244 659-913 19-300 (302)
63 KOG0605 NDR and related serine 100.0 3.8E-32 8.2E-37 292.2 6.1 233 658-907 138-443 (550)
64 cd05108 PTKc_EGFR Catalytic do 100.0 9.5E-32 2.1E-36 296.8 9.4 235 661-917 7-272 (316)
65 PTZ00263 protein kinase A cata 100.0 5.8E-32 1.3E-36 299.9 7.1 220 661-907 18-269 (329)
66 KOG0694 Serine/threonine prote 100.0 9.3E-32 2E-36 297.1 7.7 221 659-903 366-613 (694)
67 cd05054 PTKc_VEGFR Catalytic d 100.0 9.7E-32 2.1E-36 298.7 7.5 237 660-915 6-335 (337)
68 KOG0599 Phosphorylase kinase g 100.0 9.5E-33 2.1E-37 271.0 -0.6 238 657-916 13-292 (411)
69 PTZ00426 cAMP-dependent protei 100.0 2.2E-31 4.8E-36 295.8 10.1 223 660-909 29-284 (340)
70 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.9E-31 4.1E-36 296.6 9.5 228 661-909 1-257 (333)
71 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.3E-31 7.1E-36 299.6 11.5 238 658-914 34-398 (400)
72 cd05585 STKc_YPK1_like Catalyt 100.0 1.1E-31 2.4E-36 295.5 7.1 215 669-907 1-245 (312)
73 cd05612 STKc_PRKX_like Catalyt 100.0 1.1E-31 2.4E-36 292.5 6.9 222 661-909 1-254 (291)
74 cd05048 PTKc_Ror Catalytic Dom 100.0 1.3E-31 2.9E-36 290.8 7.0 232 661-913 5-283 (283)
75 cd05111 PTK_HER3 Pseudokinase 100.0 1.9E-31 4.2E-36 288.8 7.9 234 661-916 7-271 (279)
76 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.7E-31 3.6E-36 290.0 7.2 240 664-914 7-282 (283)
77 cd05097 PTKc_DDR_like Catalyti 100.0 2.2E-31 4.9E-36 290.8 7.7 237 661-912 5-295 (295)
78 cd05095 PTKc_DDR2 Catalytic do 100.0 3.6E-31 7.8E-36 289.3 9.1 237 661-912 5-296 (296)
79 KOG0577 Serine/threonine prote 100.0 3.2E-32 6.8E-37 292.2 0.7 217 663-908 28-277 (948)
80 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.1E-31 6.7E-36 295.8 8.6 179 662-847 1-207 (338)
81 cd06650 PKc_MEK1 Catalytic dom 100.0 2.7E-31 5.9E-36 294.9 8.1 173 660-847 4-201 (333)
82 cd05062 PTKc_IGF-1R Catalytic 100.0 1.2E-31 2.5E-36 290.3 4.6 233 659-912 4-277 (277)
83 cd07862 STKc_CDK6 Catalytic do 100.0 2.7E-31 5.9E-36 289.5 7.5 237 661-908 1-286 (290)
84 cd05594 STKc_PKB_alpha Catalyt 100.0 1.3E-30 2.9E-35 288.7 13.2 217 667-908 1-251 (325)
85 cd05593 STKc_PKB_gamma Catalyt 100.0 8.9E-31 1.9E-35 290.1 11.7 219 667-909 1-251 (328)
86 KOG1025 Epidermal growth facto 100.0 2.7E-31 5.8E-36 295.1 7.3 234 664-918 699-962 (1177)
87 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.5E-31 7.6E-36 287.7 8.0 242 661-913 4-283 (284)
88 cd05089 PTKc_Tie1 Catalytic do 100.0 3E-31 6.5E-36 290.1 7.5 234 661-918 2-280 (297)
89 cd05614 STKc_MSK2_N N-terminal 100.0 6.1E-31 1.3E-35 292.5 10.0 227 662-908 1-266 (332)
90 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.5E-31 7.6E-36 283.0 7.6 228 661-910 4-255 (256)
91 PLN00034 mitogen-activated pro 100.0 2.6E-31 5.6E-36 297.9 6.8 227 662-909 75-328 (353)
92 PHA03212 serine/threonine kina 100.0 5.1E-31 1.1E-35 297.9 9.1 171 661-845 92-280 (391)
93 cd05595 STKc_PKB_beta Catalyti 100.0 6.3E-31 1.4E-35 290.8 9.6 218 667-908 1-250 (323)
94 cd07848 STKc_CDKL5 Catalytic d 100.0 2.4E-31 5.2E-36 289.4 5.9 235 661-908 1-283 (287)
95 cd05051 PTKc_DDR Catalytic dom 100.0 4.1E-31 9E-36 288.9 7.8 237 660-912 4-296 (296)
96 cd05053 PTKc_FGFR Catalytic do 100.0 6.1E-31 1.3E-35 287.2 8.7 236 658-914 9-292 (293)
97 cd05093 PTKc_TrkB Catalytic do 100.0 4.5E-31 9.8E-36 287.4 7.6 236 661-917 5-283 (288)
98 KOG0579 Ste20-like serine/thre 100.0 6.8E-32 1.5E-36 291.0 0.9 219 666-908 37-288 (1187)
99 cd05090 PTKc_Ror1 Catalytic do 100.0 4.5E-31 9.7E-36 286.7 7.3 230 661-912 5-282 (283)
100 cd05094 PTKc_TrkC Catalytic do 100.0 5.2E-31 1.1E-35 287.4 7.6 235 661-916 5-285 (291)
101 cd05045 PTKc_RET Catalytic dom 100.0 4.4E-31 9.4E-36 287.8 7.0 232 662-915 1-288 (290)
102 KOG2052 Activin A type IB rece 100.0 5.8E-31 1.3E-35 275.9 7.6 251 661-915 211-505 (513)
103 cd05107 PTKc_PDGFR_beta Cataly 100.0 3.9E-31 8.4E-36 298.8 6.4 238 657-914 33-400 (401)
104 KOG0574 STE20-like serine/thre 100.0 1.2E-32 2.7E-37 273.2 -5.0 225 663-908 35-282 (502)
105 cd05584 STKc_p70S6K Catalytic 100.0 1.4E-30 3E-35 288.1 10.7 218 667-908 2-255 (323)
106 cd05626 STKc_LATS2 Catalytic d 100.0 1.3E-30 2.9E-35 295.0 10.6 232 662-909 2-305 (381)
107 cd05598 STKc_LATS Catalytic do 100.0 1.4E-30 3.1E-35 294.6 10.5 180 662-849 2-245 (376)
108 cd05035 PTKc_Axl_like Catalyti 100.0 9.6E-31 2.1E-35 282.3 8.3 235 663-913 1-272 (273)
109 cd05599 STKc_NDR_like Catalyti 100.0 7.4E-31 1.6E-35 295.8 7.6 231 661-908 1-295 (364)
110 PRK13184 pknD serine/threonine 100.0 7.2E-31 1.6E-35 311.8 7.8 241 661-916 2-293 (932)
111 cd05621 STKc_ROCK2 Catalytic d 100.0 6.9E-31 1.5E-35 295.3 7.1 233 656-909 38-304 (370)
112 PF07714 Pkinase_Tyr: Protein 100.0 1.4E-31 3E-36 286.5 1.0 225 665-910 3-259 (259)
113 KOG4645 MAPKKK (MAP kinase kin 100.0 2E-31 4.4E-36 310.6 2.4 233 658-908 1232-1493(1509)
114 cd05629 STKc_NDR_like_fungal C 100.0 2E-30 4.4E-35 293.4 10.5 180 661-848 1-248 (377)
115 cd05601 STKc_CRIK Catalytic do 100.0 1.7E-30 3.8E-35 288.6 9.7 226 661-908 1-262 (330)
116 cd05582 STKc_RSK_N N-terminal 100.0 2E-30 4.4E-35 286.3 10.1 215 667-905 2-245 (318)
117 cd05596 STKc_ROCK Catalytic do 100.0 5.6E-31 1.2E-35 296.4 5.7 232 658-908 40-303 (370)
118 cd06619 PKc_MKK5 Catalytic dom 100.0 1.1E-30 2.4E-35 282.9 7.9 232 661-909 1-253 (279)
119 cd05033 PTKc_EphR Catalytic do 100.0 1.8E-30 3.9E-35 279.2 9.2 232 661-913 4-265 (266)
120 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.1E-30 2.3E-35 286.8 7.7 236 660-916 14-299 (304)
121 cd08228 STKc_Nek6 Catalytic do 100.0 3.1E-30 6.8E-35 277.4 10.8 234 661-914 2-266 (267)
122 cd05618 STKc_aPKC_iota Catalyt 100.0 2.4E-30 5.1E-35 286.9 10.1 220 667-903 1-250 (329)
123 cd06638 STKc_myosinIIIA Cataly 100.0 1.4E-30 3E-35 283.3 7.8 243 651-909 8-283 (286)
124 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 6.1E-30 1.3E-34 277.9 12.7 240 662-913 5-283 (284)
125 cd05628 STKc_NDR1 Catalytic do 100.0 2.5E-30 5.4E-35 291.0 9.8 180 661-848 1-236 (363)
126 cd05068 PTKc_Frk_like Catalyti 100.0 1.4E-30 3E-35 279.3 7.1 231 660-912 5-260 (261)
127 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.9E-30 6.2E-35 289.4 10.1 232 661-909 1-285 (350)
128 cd08229 STKc_Nek7 Catalytic do 100.0 1.2E-30 2.6E-35 280.6 6.7 234 661-914 2-266 (267)
129 KOG1989 ARK protein kinase fam 100.0 7.2E-31 1.6E-35 299.8 5.0 242 662-916 38-314 (738)
130 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.3E-30 2.7E-35 278.7 6.5 229 661-911 4-256 (256)
131 KOG0594 Protein kinase PCTAIRE 100.0 8E-31 1.7E-35 271.7 4.8 240 662-913 12-308 (323)
132 PHA03211 serine/threonine kina 100.0 1E-30 2.2E-35 298.8 6.2 171 660-843 168-357 (461)
133 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.1E-30 4.5E-35 279.2 8.2 228 667-911 1-268 (269)
134 cd05088 PTKc_Tie2 Catalytic do 100.0 7.8E-30 1.7E-34 279.7 12.8 232 661-916 7-283 (303)
135 cd05605 STKc_GRK4_like Catalyt 100.0 1.6E-30 3.4E-35 282.6 7.2 225 662-908 1-260 (285)
136 cd07869 STKc_PFTAIRE1 Catalyti 100.0 8.6E-31 1.9E-35 287.4 5.1 174 660-848 4-204 (303)
137 cd05622 STKc_ROCK1 Catalytic d 100.0 1.6E-30 3.5E-35 292.6 7.4 238 653-909 35-304 (371)
138 cd07871 STKc_PCTAIRE3 Catalyti 100.0 9.7E-31 2.1E-35 284.7 5.3 171 661-846 5-202 (288)
139 cd05061 PTKc_InsR Catalytic do 100.0 1E-30 2.3E-35 284.5 5.6 234 659-913 4-278 (288)
140 cd05148 PTKc_Srm_Brk Catalytic 100.0 6.5E-31 1.4E-35 281.7 3.8 233 658-913 3-261 (261)
141 PTZ00267 NIMA-related protein 100.0 3.4E-30 7.3E-35 299.4 10.0 226 662-908 68-322 (478)
142 cd05049 PTKc_Trk Catalytic dom 100.0 1.8E-30 3.9E-35 281.4 7.2 231 661-912 5-280 (280)
143 cd05590 STKc_nPKC_eta Catalyti 100.0 3.1E-30 6.6E-35 284.9 9.1 213 667-903 1-241 (320)
144 cd05591 STKc_nPKC_epsilon Cata 100.0 4E-30 8.7E-35 284.3 10.0 218 667-908 1-253 (321)
145 cd05588 STKc_aPKC Catalytic do 100.0 4.5E-30 9.8E-35 284.7 10.4 224 667-907 1-260 (329)
146 cd05072 PTKc_Lyn Catalytic dom 100.0 6.5E-30 1.4E-34 274.0 11.2 231 661-913 6-261 (261)
147 cd05592 STKc_nPKC_theta_delta 100.0 4.2E-30 9.1E-35 283.3 9.9 215 667-905 1-243 (316)
148 cd05032 PTKc_InsR_like Catalyt 100.0 3.1E-30 6.7E-35 279.1 8.7 231 661-912 6-277 (277)
149 cd05109 PTKc_HER2 Catalytic do 100.0 1.6E-30 3.5E-35 281.6 6.4 235 661-917 7-272 (279)
150 KOG0199 ACK and related non-re 100.0 1.1E-30 2.4E-35 285.5 4.9 225 664-910 113-369 (1039)
151 cd05589 STKc_PKN Catalytic dom 100.0 3.6E-30 7.7E-35 285.1 9.0 222 663-908 1-256 (324)
152 cd05103 PTKc_VEGFR2 Catalytic 100.0 7.5E-30 1.6E-34 284.7 11.7 237 660-915 6-341 (343)
153 cd05625 STKc_LATS1 Catalytic d 100.0 2.9E-30 6.2E-35 292.7 8.4 180 662-849 2-249 (382)
154 cd05575 STKc_SGK Catalytic dom 100.0 6E-30 1.3E-34 283.2 10.8 214 667-904 1-242 (323)
155 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.8E-30 3.9E-35 285.4 6.4 238 660-918 17-304 (307)
156 cd06637 STKc_TNIK Catalytic do 100.0 2E-30 4.3E-35 279.8 6.6 235 657-908 2-268 (272)
157 cd05082 PTKc_Csk Catalytic dom 100.0 3.1E-30 6.7E-35 275.7 7.7 229 661-913 6-256 (256)
158 cd05602 STKc_SGK1 Catalytic do 100.0 5.3E-30 1.1E-34 283.9 9.8 219 667-909 1-247 (325)
159 cd05047 PTKc_Tie Catalytic dom 100.0 2.1E-30 4.5E-35 279.3 6.4 224 667-914 1-269 (270)
160 cd05052 PTKc_Abl Catalytic dom 100.0 1.2E-29 2.6E-34 272.3 12.3 230 662-913 7-262 (263)
161 PTZ00036 glycogen synthase kin 100.0 1E-30 2.2E-35 300.3 4.0 179 659-848 64-271 (440)
162 PTZ00283 serine/threonine prot 100.0 4.7E-30 1E-34 298.2 9.7 239 654-908 25-296 (496)
163 cd05604 STKc_SGK3 Catalytic do 100.0 7.5E-30 1.6E-34 282.6 10.8 219 667-909 1-247 (325)
164 cd07876 STKc_JNK2 Catalytic do 100.0 4.5E-30 9.7E-35 288.6 9.1 178 660-848 20-222 (359)
165 cd05084 PTKc_Fes Catalytic dom 100.0 2.3E-30 5E-35 275.9 6.4 225 667-912 1-252 (252)
166 cd05075 PTKc_Axl Catalytic dom 100.0 9.2E-30 2E-34 274.6 11.1 234 664-913 2-271 (272)
167 cd05036 PTKc_ALK_LTK Catalytic 100.0 2E-30 4.4E-35 280.6 5.9 233 659-912 4-277 (277)
168 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.4E-30 5.1E-35 278.6 6.3 233 661-913 5-267 (268)
169 cd05608 STKc_GRK1 Catalytic do 100.0 2.3E-30 5E-35 280.5 6.2 220 669-908 1-256 (280)
170 KOG0986 G protein-coupled rece 100.0 2.4E-30 5.3E-35 271.0 6.0 222 660-903 184-435 (591)
171 cd07868 STKc_CDK8 Catalytic do 100.0 6.1E-30 1.3E-34 282.6 9.5 172 666-847 6-215 (317)
172 cd05616 STKc_cPKC_beta Catalyt 100.0 7.1E-30 1.5E-34 282.6 10.0 218 662-903 1-246 (323)
173 cd05587 STKc_cPKC Catalytic do 100.0 6.5E-30 1.4E-34 283.0 9.7 218 662-903 1-246 (324)
174 cd05627 STKc_NDR2 Catalytic do 100.0 1.1E-29 2.3E-34 285.6 11.5 181 661-849 1-237 (360)
175 cd05059 PTKc_Tec_like Catalyti 100.0 2E-30 4.4E-35 277.1 5.3 227 662-910 5-255 (256)
176 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.4E-30 9.4E-35 276.5 7.7 227 668-911 2-267 (268)
177 cd05099 PTKc_FGFR4 Catalytic d 100.0 5.5E-30 1.2E-34 282.5 8.7 237 661-918 12-298 (314)
178 cd05116 PTKc_Syk Catalytic dom 100.0 4.1E-30 9E-35 274.9 7.4 224 668-912 2-254 (257)
179 cd05091 PTKc_Ror2 Catalytic do 100.0 1.9E-30 4.2E-35 281.7 4.9 230 662-912 6-282 (283)
180 cd06639 STKc_myosinIIIB Cataly 100.0 4.2E-30 9.1E-35 280.2 7.6 242 651-908 12-286 (291)
181 cd05115 PTKc_Zap-70 Catalytic 100.0 5.3E-30 1.2E-34 274.0 8.2 224 668-913 2-255 (257)
182 cd05042 PTKc_Aatyk Catalytic d 100.0 3.2E-30 7E-35 277.7 6.3 227 668-911 2-268 (269)
183 cd05100 PTKc_FGFR3 Catalytic d 100.0 4.6E-30 1E-34 285.6 7.5 236 661-917 12-297 (334)
184 cd05071 PTKc_Src Catalytic dom 100.0 6E-30 1.3E-34 274.4 7.7 230 661-913 6-260 (262)
185 cd05607 STKc_GRK7 Catalytic do 100.0 5.3E-30 1.1E-34 277.2 7.3 219 669-909 1-250 (277)
186 cd05603 STKc_SGK2 Catalytic do 100.0 1.4E-29 3E-34 280.1 10.8 214 667-904 1-242 (321)
187 PHA03209 serine/threonine kina 100.0 3.6E-30 7.8E-35 288.7 6.1 169 659-843 64-251 (357)
188 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 7.1E-30 1.5E-34 273.2 7.9 216 667-911 1-258 (258)
189 cd05617 STKc_aPKC_zeta Catalyt 100.0 9.8E-30 2.1E-34 281.8 9.3 220 667-903 1-248 (327)
190 cd07874 STKc_JNK3 Catalytic do 100.0 5.1E-30 1.1E-34 287.8 7.1 179 659-848 15-218 (355)
191 cd05620 STKc_nPKC_delta Cataly 100.0 1.1E-29 2.3E-34 280.1 9.5 217 667-907 1-246 (316)
192 KOG0032 Ca2+/calmodulin-depend 100.0 1.9E-29 4.1E-34 278.1 11.4 228 660-908 34-292 (382)
193 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.5E-29 5.4E-34 270.3 12.1 234 661-914 2-266 (267)
194 cd08219 STKc_Nek3 Catalytic do 100.0 2.2E-29 4.8E-34 268.9 11.5 225 662-909 1-252 (255)
195 cd05619 STKc_nPKC_theta Cataly 100.0 1.1E-29 2.3E-34 279.9 9.4 217 667-907 1-246 (316)
196 cd05055 PTKc_PDGFR Catalytic d 100.0 5.7E-30 1.2E-34 280.5 7.1 233 661-913 35-301 (302)
197 cd05570 STKc_PKC Catalytic dom 100.0 9.8E-30 2.1E-34 280.7 9.0 218 667-908 1-251 (318)
198 cd06615 PKc_MEK Catalytic doma 100.0 9.9E-30 2.1E-34 279.5 8.9 172 661-847 1-197 (308)
199 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3.3E-29 7.1E-34 272.0 12.7 242 661-913 4-283 (284)
200 cd07863 STKc_CDK4 Catalytic do 100.0 6.4E-30 1.4E-34 278.3 7.1 236 662-908 1-284 (288)
201 cd06624 STKc_ASK Catalytic dom 100.0 1.1E-29 2.4E-34 273.3 8.9 233 655-908 2-264 (268)
202 cd05060 PTKc_Syk_like Catalyti 100.0 8.4E-30 1.8E-34 272.5 7.8 227 667-914 1-256 (257)
203 cd05110 PTKc_HER4 Catalytic do 100.0 5E-30 1.1E-34 281.2 5.8 234 661-917 7-272 (303)
204 cd05065 PTKc_EphR_B Catalytic 100.0 2.4E-29 5.2E-34 270.9 11.0 234 662-913 5-268 (269)
205 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.1E-29 2.3E-34 274.3 8.1 215 668-910 2-273 (274)
206 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.9E-29 4E-34 270.5 9.7 216 667-910 1-261 (262)
207 cd07853 STKc_NLK Catalytic dom 100.0 1.3E-29 2.7E-34 286.3 8.7 178 662-848 1-205 (372)
208 cd05050 PTKc_Musk Catalytic do 100.0 1E-29 2.2E-34 276.8 7.6 232 660-912 4-288 (288)
209 cd05069 PTKc_Yes Catalytic dom 100.0 7.1E-30 1.5E-34 273.5 6.3 229 661-912 6-259 (260)
210 cd05058 PTKc_Met_Ron Catalytic 100.0 3.4E-29 7.3E-34 268.6 11.5 231 667-914 1-260 (262)
211 cd07875 STKc_JNK1 Catalytic do 100.0 1.4E-29 3E-34 285.2 8.8 179 659-848 22-225 (364)
212 cd05066 PTKc_EphR_A Catalytic 100.0 2.8E-29 6.1E-34 270.1 10.8 233 661-913 4-266 (267)
213 cd07867 STKc_CDC2L6 Catalytic 100.0 1.7E-29 3.7E-34 279.1 8.6 173 666-848 6-216 (317)
214 cd05039 PTKc_Csk_like Catalyti 100.0 1.1E-29 2.3E-34 271.5 6.8 227 661-913 6-256 (256)
215 cd06646 STKc_MAP4K5 Catalytic 100.0 1.1E-29 2.3E-34 273.3 6.7 229 660-909 8-265 (267)
216 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.8E-29 4E-34 273.8 8.4 241 651-908 6-278 (282)
217 cd06654 STKc_PAK1 Catalytic do 100.0 1.2E-29 2.5E-34 277.3 6.9 227 661-908 20-269 (296)
218 KOG0596 Dual specificity; seri 100.0 1.1E-29 2.3E-34 272.5 6.3 225 661-908 361-626 (677)
219 cd05046 PTK_CCK4 Pseudokinase 100.0 2E-29 4.4E-34 272.4 8.4 230 661-911 5-274 (275)
220 cd05057 PTKc_EGFR_like Catalyt 100.0 1.9E-29 4.1E-34 273.3 7.9 234 661-916 7-271 (279)
221 PHA02882 putative serine/threo 100.0 2.1E-29 4.6E-34 274.9 8.3 242 661-911 12-294 (294)
222 cd05092 PTKc_TrkA Catalytic do 100.0 4.3E-29 9.4E-34 270.6 10.7 231 662-912 6-280 (280)
223 cd05043 PTK_Ryk Pseudokinase d 100.0 6.3E-29 1.4E-33 269.4 11.9 237 660-916 5-279 (280)
224 cd05630 STKc_GRK6 Catalytic do 100.0 1.5E-29 3.3E-34 274.8 7.1 224 663-908 2-260 (285)
225 PHA03207 serine/threonine kina 100.0 1.5E-29 3.2E-34 287.4 7.2 175 661-848 92-287 (392)
226 cd05044 PTKc_c-ros Catalytic d 100.0 2.2E-29 4.9E-34 271.1 7.9 225 667-912 1-269 (269)
227 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.1E-29 6.8E-34 280.1 9.2 176 658-846 12-214 (343)
228 cd06651 STKc_MEKK3 Catalytic d 100.0 4.9E-29 1.1E-33 268.1 10.3 230 661-908 2-260 (266)
229 cd05632 STKc_GRK5 Catalytic do 100.0 2.1E-29 4.5E-34 273.8 7.5 224 663-908 2-260 (285)
230 cd06643 STKc_SLK Catalytic dom 100.0 3.3E-29 7.1E-34 271.9 9.0 225 663-908 7-261 (282)
231 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 7.2E-29 1.6E-33 265.8 11.3 229 661-912 6-259 (260)
232 cd05624 STKc_MRCK_beta Catalyt 100.0 3.2E-29 6.9E-34 278.2 8.7 175 661-848 1-208 (331)
233 PHA03210 serine/threonine kina 100.0 1.9E-29 4E-34 294.2 7.2 172 659-844 146-364 (501)
234 cd06631 STKc_YSK4 Catalytic do 100.0 2.9E-29 6.3E-34 269.6 8.0 232 662-908 1-261 (265)
235 cd08529 STKc_FA2-like Catalyti 100.0 1.2E-28 2.5E-33 263.3 12.4 224 662-908 1-252 (256)
236 cd05597 STKc_DMPK_like Catalyt 100.0 6.4E-29 1.4E-33 275.8 10.1 175 661-848 1-208 (331)
237 cd05067 PTKc_Lck_Blk Catalytic 100.0 3.5E-29 7.7E-34 268.1 7.8 230 660-912 5-259 (260)
238 cd05615 STKc_cPKC_alpha Cataly 100.0 5.6E-29 1.2E-33 275.2 9.6 218 662-903 1-246 (323)
239 PF00069 Pkinase: Protein kina 100.0 1E-29 2.2E-34 272.2 3.2 228 663-908 1-256 (260)
240 PTZ00266 NIMA-related protein 100.0 4.4E-29 9.6E-34 297.6 8.6 233 657-908 9-294 (1021)
241 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.5E-29 3.2E-34 278.5 4.1 173 661-848 6-205 (309)
242 cd05040 PTKc_Ack_like Catalyti 100.0 5.3E-29 1.1E-33 266.2 8.4 226 667-912 1-257 (257)
243 cd05056 PTKc_FAK Catalytic dom 100.0 2.4E-28 5.1E-33 263.3 13.4 233 661-916 6-268 (270)
244 cd05073 PTKc_Hck Catalytic dom 100.0 6.4E-29 1.4E-33 266.2 8.8 230 660-912 5-259 (260)
245 cd06608 STKc_myosinIII_like Ca 100.0 4.3E-29 9.2E-34 269.6 7.5 235 658-908 3-271 (275)
246 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.6E-29 5.6E-34 273.0 5.7 231 661-909 5-266 (284)
247 KOG0666 Cyclin C-dependent kin 100.0 1.8E-29 3.8E-34 252.6 3.9 171 661-842 24-234 (438)
248 cd06625 STKc_MEKK3_like Cataly 100.0 2.6E-28 5.6E-33 261.9 13.1 230 661-909 2-260 (263)
249 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 5.9E-29 1.3E-33 266.1 8.1 216 667-911 1-259 (259)
250 cd06645 STKc_MAP4K3 Catalytic 100.0 3.8E-29 8.1E-34 269.1 6.3 229 661-908 9-264 (267)
251 cd06656 STKc_PAK3 Catalytic do 100.0 3E-29 6.5E-34 274.2 5.0 227 661-908 19-268 (297)
252 KOG0610 Putative serine/threon 100.0 3.3E-29 7.2E-34 261.1 4.9 228 662-907 78-390 (459)
253 cd05586 STKc_Sck1_like Catalyt 100.0 1.2E-28 2.6E-33 273.8 9.7 212 669-903 1-243 (330)
254 cd06644 STKc_STK10_LOK Catalyt 100.0 1.2E-28 2.7E-33 268.8 9.6 227 661-908 12-268 (292)
255 cd05112 PTKc_Itk Catalytic dom 100.0 5.3E-29 1.2E-33 266.1 6.5 230 661-911 4-256 (256)
256 PTZ00284 protein kinase; Provi 100.0 3.7E-29 8.1E-34 290.7 5.6 179 654-848 122-345 (467)
257 KOG1035 eIF-2alpha kinase GCN2 100.0 3.1E-29 6.8E-34 291.2 4.9 239 658-908 476-870 (1351)
258 cd05623 STKc_MRCK_alpha Cataly 100.0 1.6E-28 3.4E-33 272.9 10.4 175 661-848 1-208 (332)
259 cd00192 PTKc Catalytic domain 100.0 1E-28 2.3E-33 264.4 8.5 224 667-911 1-262 (262)
260 cd06655 STKc_PAK2 Catalytic do 100.0 5.6E-29 1.2E-33 271.8 6.5 227 661-908 19-268 (296)
261 KOG0604 MAP kinase-activated p 100.0 8.5E-29 1.8E-33 246.8 7.1 235 660-908 60-321 (400)
262 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 8E-29 1.7E-33 269.4 7.4 227 661-908 1-261 (286)
263 cd06628 STKc_MAPKKK_Byr2_like 100.0 4E-28 8.8E-33 261.0 12.8 230 662-908 1-263 (267)
264 cd06621 PKc_MAPKK_Pek1_like Ca 99.9 9.3E-29 2E-33 269.0 7.7 232 661-908 1-265 (287)
265 cd06612 STKc_MST1_2 Catalytic 99.9 6.9E-29 1.5E-33 265.1 6.4 227 661-908 3-252 (256)
266 cd06611 STKc_SLK_like Catalyti 99.9 4.1E-29 8.9E-34 270.8 4.6 229 660-909 4-262 (280)
267 KOG0200 Fibroblast/platelet-de 99.9 1.3E-28 2.9E-33 291.1 9.3 238 657-915 292-581 (609)
268 cd05609 STKc_MAST Catalytic do 99.9 1.1E-28 2.3E-33 271.0 7.9 237 661-912 1-273 (305)
269 cd05085 PTKc_Fer Catalytic dom 99.9 2.9E-28 6.4E-33 259.3 10.9 224 667-911 1-249 (250)
270 cd05083 PTKc_Chk Catalytic dom 99.9 3.4E-28 7.4E-33 259.5 11.2 225 661-912 6-253 (254)
271 KOG0586 Serine/threonine prote 99.9 1.4E-28 3.1E-33 269.3 8.3 223 659-909 54-306 (596)
272 cd06658 STKc_PAK5 Catalytic do 99.9 6.4E-29 1.4E-33 270.8 5.4 224 664-908 25-271 (292)
273 cd07873 STKc_PCTAIRE1 Catalyti 99.9 5.5E-29 1.2E-33 272.8 4.7 243 661-918 6-297 (301)
274 cd06613 STKc_MAP4K3_like Catal 99.9 5.6E-28 1.2E-32 259.0 11.9 230 660-908 2-259 (262)
275 cd05041 PTKc_Fes_like Catalyti 99.9 1.6E-28 3.4E-33 261.6 7.4 225 667-912 1-251 (251)
276 cd06609 STKc_MST3_like Catalyt 99.9 1.2E-28 2.5E-33 266.4 6.5 226 661-908 1-250 (274)
277 cd08227 PK_STRAD_alpha Pseudok 99.9 8.4E-29 1.8E-33 274.6 5.1 176 666-849 3-211 (327)
278 cd06629 STKc_MAPKKK_Bck1_like 99.9 2.6E-28 5.7E-33 263.3 8.6 229 662-908 2-268 (272)
279 cd08528 STKc_Nek10 Catalytic d 99.9 1.8E-28 3.9E-33 264.1 6.9 229 662-912 1-269 (269)
280 cd08221 STKc_Nek9 Catalytic do 99.9 8.4E-28 1.8E-32 256.8 12.0 225 662-909 1-253 (256)
281 cd05034 PTKc_Src_like Catalyti 99.9 6.6E-28 1.4E-32 258.4 11.0 231 660-912 5-260 (261)
282 cd05074 PTKc_Tyro3 Catalytic d 99.9 8.9E-28 1.9E-32 259.2 11.9 235 663-913 1-272 (273)
283 cd07849 STKc_ERK1_2_like Catal 99.9 2.3E-28 4.9E-33 272.2 7.3 247 660-913 4-298 (336)
284 cd06610 STKc_OSR1_SPAK Catalyt 99.9 5E-28 1.1E-32 260.1 9.6 234 661-908 1-263 (267)
285 cd08223 STKc_Nek4 Catalytic do 99.9 1.2E-27 2.5E-32 255.8 12.4 225 662-908 1-253 (257)
286 cd06647 STKc_PAK_I Catalytic d 99.9 2.2E-28 4.8E-33 266.8 6.9 228 661-909 19-269 (293)
287 cd08217 STKc_Nek2 Catalytic do 99.9 2E-28 4.4E-33 262.7 6.3 229 662-908 1-261 (265)
288 cd06630 STKc_MEKK1 Catalytic d 99.9 1.1E-27 2.3E-32 257.9 11.7 231 662-908 1-263 (268)
289 cd06659 STKc_PAK6 Catalytic do 99.9 1.4E-28 3.1E-33 268.8 4.9 223 666-909 26-271 (297)
290 cd06652 STKc_MEKK2 Catalytic d 99.9 1.4E-27 3E-32 256.6 12.4 230 661-908 2-260 (265)
291 cd07850 STKc_JNK Catalytic dom 99.9 4.8E-28 1E-32 271.5 9.1 177 659-846 14-215 (353)
292 cd07861 STKc_CDK1_euk Catalyti 99.9 1.6E-28 3.4E-33 266.9 5.0 169 662-845 1-199 (285)
293 cd08218 STKc_Nek1 Catalytic do 99.9 1.2E-27 2.6E-32 255.5 11.8 224 662-908 1-252 (256)
294 cd06642 STKc_STK25-YSK1 Cataly 99.9 6.2E-28 1.4E-32 261.1 9.6 223 662-908 5-252 (277)
295 cd07839 STKc_CDK5 Catalytic do 99.9 1.7E-28 3.6E-33 266.6 5.1 169 662-845 1-197 (284)
296 cd07847 STKc_CDKL1_4 Catalytic 99.9 3.2E-28 6.9E-33 264.6 7.3 173 661-847 1-200 (286)
297 KOG0690 Serine/threonine prote 99.9 7.1E-28 1.5E-32 242.0 8.8 217 660-901 167-411 (516)
298 cd05574 STKc_phototropin_like 99.9 5.3E-28 1.2E-32 267.0 8.7 230 661-908 1-288 (316)
299 KOG0669 Cyclin T-dependent kin 99.9 5.2E-29 1.1E-33 242.2 0.4 174 662-841 18-222 (376)
300 cd06605 PKc_MAPKK Catalytic do 99.9 2.5E-28 5.4E-33 262.3 5.6 229 661-908 1-256 (265)
301 cd07846 STKc_CDKL2_3 Catalytic 99.9 2E-28 4.3E-33 266.2 4.9 170 661-844 1-197 (286)
302 cd05580 STKc_PKA Catalytic dom 99.9 8E-28 1.7E-32 262.1 9.4 220 661-907 1-252 (290)
303 cd07833 STKc_CDKL Catalytic do 99.9 7E-28 1.5E-32 262.2 7.9 173 661-846 1-200 (288)
304 cd07870 STKc_PFTAIRE2 Catalyti 99.9 3.8E-28 8.1E-33 264.9 5.7 174 659-847 3-203 (291)
305 cd06640 STKc_MST4 Catalytic do 99.9 1.6E-27 3.4E-32 257.9 10.5 225 662-909 5-253 (277)
306 cd08220 STKc_Nek8 Catalytic do 99.9 2.4E-27 5.2E-32 253.2 11.4 223 662-908 1-252 (256)
307 cd06607 STKc_TAO Catalytic dom 99.9 1.1E-27 2.3E-32 263.3 8.9 221 661-908 15-266 (307)
308 cd07855 STKc_ERK5 Catalytic do 99.9 8.5E-28 1.8E-32 267.4 8.2 242 660-908 4-293 (334)
309 cd05578 STKc_Yank1 Catalytic d 99.9 6.9E-28 1.5E-32 257.8 7.0 223 662-907 1-253 (258)
310 KOG0587 Traf2- and Nck-interac 99.9 2.7E-27 5.8E-32 267.1 12.0 241 651-908 9-281 (953)
311 KOG0667 Dual-specificity tyros 99.9 6.8E-28 1.5E-32 267.0 7.0 165 662-844 187-384 (586)
312 cd06648 STKc_PAK_II Catalytic 99.9 1.1E-27 2.4E-32 260.2 8.0 226 662-908 20-268 (285)
313 cd07841 STKc_CDK7 Catalytic do 99.9 7.3E-28 1.6E-32 263.5 6.7 168 662-844 1-199 (298)
314 KOG4250 TANK binding protein k 99.9 9.1E-28 2E-32 266.2 7.0 178 664-851 16-227 (732)
315 cd07837 STKc_CdkB_plant Cataly 99.9 1.5E-27 3.2E-32 260.7 8.6 238 661-908 1-290 (295)
316 KOG0983 Mitogen-activated prot 99.9 2.5E-28 5.4E-33 240.3 2.1 222 666-908 97-348 (391)
317 cd06617 PKc_MKK3_6 Catalytic d 99.9 9.3E-28 2E-32 260.6 6.8 226 661-908 1-260 (283)
318 cd07843 STKc_CDC2L1 Catalytic 99.9 4.6E-28 9.9E-33 264.4 4.3 172 661-845 5-204 (293)
319 cd06626 STKc_MEKK4 Catalytic d 99.9 2.3E-27 5E-32 254.5 9.5 231 662-908 1-260 (264)
320 KOG4717 Serine/threonine prote 99.9 6.7E-28 1.5E-32 255.2 5.1 221 661-908 18-269 (864)
321 cd07858 STKc_TEY_MAPK_plant Ca 99.9 1.3E-27 2.8E-32 266.2 7.7 245 660-914 4-298 (337)
322 cd06632 STKc_MEKK1_plant Catal 99.9 3.4E-27 7.5E-32 252.2 10.7 224 662-908 1-254 (258)
323 cd07860 STKc_CDK2_3 Catalytic 99.9 9.7E-28 2.1E-32 260.6 6.2 170 662-846 1-199 (284)
324 KOG1006 Mitogen-activated prot 99.9 1.4E-28 3.1E-33 241.3 -0.6 231 650-908 60-326 (361)
325 cd06614 STKc_PAK Catalytic dom 99.9 2.1E-27 4.5E-32 258.3 8.4 230 658-908 16-269 (286)
326 cd07852 STKc_MAPK15 Catalytic 99.9 1E-27 2.2E-32 267.1 6.1 181 659-847 5-212 (337)
327 cd06641 STKc_MST3 Catalytic do 99.9 5.2E-27 1.1E-31 253.9 11.2 225 662-909 5-253 (277)
328 cd07865 STKc_CDK9 Catalytic do 99.9 1.9E-27 4.1E-32 261.7 7.9 179 660-844 11-220 (310)
329 PLN03225 Serine/threonine-prot 99.9 1.6E-27 3.6E-32 279.1 7.6 177 659-843 130-374 (566)
330 cd07844 STKc_PCTAIRE_like Cata 99.9 6.4E-27 1.4E-31 255.1 11.6 172 661-847 5-203 (291)
331 smart00219 TyrKc Tyrosine kina 99.9 8.1E-27 1.8E-31 249.3 11.9 225 664-910 2-258 (258)
332 cd08225 STKc_Nek5 Catalytic do 99.9 5.3E-27 1.1E-31 250.7 10.3 224 662-908 1-253 (257)
333 cd06917 STKc_NAK1_like Catalyt 99.9 1.7E-27 3.6E-32 257.8 6.2 225 662-908 2-254 (277)
334 cd07879 STKc_p38delta_MAPK13 C 99.9 2.7E-27 5.9E-32 264.1 7.9 250 653-916 3-306 (342)
335 cd06616 PKc_MKK4 Catalytic dom 99.9 1.2E-27 2.6E-32 260.5 4.7 228 662-909 5-267 (288)
336 cd06623 PKc_MAPKK_plant_like C 99.9 3.9E-27 8.4E-32 252.7 8.6 229 661-909 1-256 (264)
337 cd05583 STKc_MSK_N N-terminal 99.9 2.5E-27 5.5E-32 257.9 7.2 232 662-913 1-267 (288)
338 cd05633 STKc_GRK3 Catalytic do 99.9 1.7E-27 3.6E-32 257.9 5.7 219 668-909 1-255 (279)
339 KOG1151 Tousled-like protein k 99.9 9.8E-28 2.1E-32 249.6 3.6 236 661-907 463-739 (775)
340 cd05572 STKc_cGK_PKG Catalytic 99.9 4.5E-27 9.6E-32 252.2 8.6 219 669-908 1-251 (262)
341 cd07832 STKc_CCRK Catalytic do 99.9 1.7E-27 3.8E-32 258.8 5.4 169 662-844 1-197 (286)
342 KOG1024 Receptor-like protein 99.9 2.3E-26 4.9E-31 236.8 12.7 245 654-917 277-559 (563)
343 cd07835 STKc_CDK1_like Catalyt 99.9 3.4E-27 7.4E-32 256.1 6.5 168 663-845 1-197 (283)
344 cd07838 STKc_CDK4_6_like Catal 99.9 1.1E-26 2.5E-31 252.5 10.5 235 663-908 1-283 (287)
345 cd07857 STKc_MPK1 Catalytic do 99.9 7.7E-27 1.7E-31 259.5 9.2 177 662-845 1-207 (332)
346 cd07866 STKc_BUR1 Catalytic do 99.9 2.9E-27 6.4E-32 260.4 5.7 183 660-846 7-225 (311)
347 cd06657 STKc_PAK4 Catalytic do 99.9 3.7E-27 8.1E-32 256.8 6.3 221 667-908 26-269 (292)
348 cd06635 STKc_TAO1 Catalytic do 99.9 6.1E-27 1.3E-31 258.5 7.9 220 663-909 27-277 (317)
349 cd06653 STKc_MEKK3_like_1 Cata 99.9 2.2E-26 4.7E-31 247.1 11.4 230 661-908 2-260 (264)
350 cd06606 STKc_MAPKKK Catalytic 99.9 9.1E-27 2E-31 248.8 8.0 230 662-908 1-256 (260)
351 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 8.1E-27 1.8E-31 258.4 7.7 177 655-848 4-206 (328)
352 cd07834 STKc_MAPK Catalytic do 99.9 8E-27 1.7E-31 259.3 7.5 247 662-915 1-297 (330)
353 cd07842 STKc_CDK8_like Catalyt 99.9 6.6E-27 1.4E-31 258.2 6.8 174 662-845 1-213 (316)
354 cd07845 STKc_CDK10 Catalytic d 99.9 5E-27 1.1E-31 258.3 5.7 175 660-847 6-208 (309)
355 cd06634 STKc_TAO2 Catalytic do 99.9 7.5E-27 1.6E-31 256.6 6.8 221 662-909 16-267 (308)
356 cd08222 STKc_Nek11 Catalytic d 99.9 1.8E-26 3.9E-31 247.1 9.5 223 662-908 1-256 (260)
357 cd05577 STKc_GRK Catalytic dom 99.9 8.8E-27 1.9E-31 252.1 7.1 218 669-907 1-252 (277)
358 cd08226 PK_STRAD_beta Pseudoki 99.9 8.7E-27 1.9E-31 258.6 7.1 173 667-847 4-209 (328)
359 cd05613 STKc_MSK1_N N-terminal 99.9 9.8E-27 2.1E-31 253.6 7.3 226 662-908 1-267 (290)
360 PHA03390 pk1 serine/threonine- 99.9 2.5E-26 5.5E-31 246.9 10.2 230 654-908 7-261 (267)
361 PLN00009 cyclin-dependent kina 99.9 1E-26 2.2E-31 254.0 7.1 171 661-846 2-202 (294)
362 cd07864 STKc_CDK12 Catalytic d 99.9 6.8E-27 1.5E-31 256.4 5.5 178 658-844 4-214 (302)
363 KOG0662 Cyclin-dependent kinas 99.9 4.7E-27 1E-31 217.2 3.3 165 662-841 3-195 (292)
364 cd07831 STKc_MOK Catalytic dom 99.9 2.1E-26 4.5E-31 249.8 8.8 231 663-908 1-278 (282)
365 cd07854 STKc_MAPK4_6 Catalytic 99.9 7.1E-27 1.5E-31 260.7 5.0 181 661-848 5-219 (342)
366 cd07836 STKc_Pho85 Catalytic d 99.9 1.2E-26 2.5E-31 252.1 6.5 169 662-845 1-198 (284)
367 cd08216 PK_STRAD Pseudokinase 99.9 1.4E-26 2.9E-31 255.5 7.0 235 666-908 7-294 (314)
368 cd05118 STKc_CMGC Catalytic do 99.9 1.7E-26 3.6E-31 250.7 7.3 231 663-908 1-279 (283)
369 cd05606 STKc_beta_ARK Catalyti 99.9 1.1E-26 2.4E-31 251.4 5.8 218 668-908 1-254 (278)
370 cd08215 STKc_Nek Catalytic dom 99.9 5.9E-26 1.3E-30 242.4 11.4 224 662-908 1-254 (258)
371 cd07840 STKc_CDK9_like Catalyt 99.9 1.3E-26 2.8E-31 251.9 6.0 173 663-847 1-201 (287)
372 cd05611 STKc_Rim15_like Cataly 99.9 1.9E-26 4.1E-31 247.0 7.1 221 667-911 2-250 (260)
373 KOG0612 Rho-associated, coiled 99.9 6.4E-27 1.4E-31 269.9 3.5 183 653-848 67-281 (1317)
374 cd07880 STKc_p38gamma_MAPK12 C 99.9 1.1E-26 2.4E-31 259.2 5.3 177 656-845 10-213 (343)
375 cd07830 STKc_MAK_like Catalyti 99.9 3.3E-26 7.2E-31 248.4 8.7 167 663-845 1-196 (283)
376 cd05581 STKc_PDK1 Catalytic do 99.9 2.1E-26 4.5E-31 249.4 7.0 230 661-908 1-276 (280)
377 cd05122 PKc_STE Catalytic doma 99.9 8.8E-26 1.9E-30 240.1 11.6 225 662-908 1-250 (253)
378 KOG4236 Serine/threonine prote 99.9 1.7E-26 3.7E-31 245.1 6.0 218 666-907 569-817 (888)
379 KOG0603 Ribosomal protein S6 k 99.9 1E-26 2.2E-31 256.2 4.3 221 660-908 321-562 (612)
380 cd08530 STKc_CNK2-like Catalyt 99.9 6.3E-26 1.4E-30 242.1 9.9 222 662-908 1-252 (256)
381 cd07877 STKc_p38alpha_MAPK14 C 99.9 1.9E-26 4.2E-31 257.5 6.2 181 652-845 8-215 (345)
382 cd06627 STKc_Cdc7_like Catalyt 99.9 1.2E-25 2.7E-30 239.5 11.8 224 662-908 1-250 (254)
383 KOG4237 Extracellular matrix p 99.9 2.5E-27 5.4E-32 244.8 -1.8 433 77-563 52-498 (498)
384 cd06618 PKc_MKK7 Catalytic dom 99.9 6E-26 1.3E-30 248.1 8.9 228 660-909 14-273 (296)
385 cd05579 STKc_MAST_like Catalyt 99.9 3.4E-26 7.5E-31 245.4 6.8 227 669-911 1-256 (265)
386 cd07851 STKc_p38 Catalytic dom 99.9 2.2E-26 4.8E-31 256.8 5.0 176 658-846 12-214 (343)
387 KOG0696 Serine/threonine prote 99.9 4.3E-26 9.2E-31 235.7 5.8 173 662-848 350-550 (683)
388 cd06633 STKc_TAO3 Catalytic do 99.9 3.2E-25 7E-30 244.2 12.3 219 663-908 23-272 (313)
389 KOG0614 cGMP-dependent protein 99.9 1E-26 2.2E-31 246.4 -0.0 225 647-902 413-665 (732)
390 KOG0671 LAMMER dual specificit 99.9 1.7E-25 3.6E-30 231.4 8.4 175 660-852 88-313 (415)
391 cd07829 STKc_CDK_like Catalyti 99.9 8.2E-26 1.8E-30 245.0 6.5 167 663-844 1-195 (282)
392 PTZ00024 cyclin-dependent prot 99.9 6.1E-26 1.3E-30 252.7 5.4 178 661-847 8-233 (335)
393 cd05610 STKc_MASTL Catalytic d 99.9 9.2E-26 2E-30 271.3 7.1 122 661-790 4-152 (669)
394 KOG0607 MAP kinase-interacting 99.9 9.7E-26 2.1E-30 226.5 5.8 244 652-908 74-360 (463)
395 PLN03210 Resistant to P. syrin 99.9 1.4E-23 3E-28 266.6 26.3 344 89-491 552-903 (1153)
396 cd05123 STKc_AGC Catalytic dom 99.9 3.2E-25 7E-30 235.8 8.2 213 669-905 1-240 (250)
397 PLN03224 probable serine/threo 99.9 3.1E-25 6.8E-30 252.9 8.4 243 658-908 142-499 (507)
398 KOG0576 Mitogen-activated prot 99.9 1E-25 2.2E-30 246.6 4.2 227 659-907 13-269 (829)
399 KOG0984 Mitogen-activated prot 99.9 5.5E-26 1.2E-30 215.3 1.8 175 663-852 48-256 (282)
400 KOG0664 Nemo-like MAPK-related 99.9 5.1E-26 1.1E-30 223.5 -0.5 177 663-848 55-258 (449)
401 PLN03210 Resistant to P. syrin 99.9 4.3E-23 9.4E-28 262.1 25.7 345 159-539 549-903 (1153)
402 cd05576 STKc_RPK118_like Catal 99.9 2.9E-25 6.2E-30 234.3 4.2 204 672-906 4-226 (237)
403 KOG4237 Extracellular matrix p 99.9 1.2E-25 2.5E-30 232.5 -0.3 405 63-539 50-498 (498)
404 KOG1027 Serine/threonine prote 99.9 2E-24 4.4E-29 243.0 7.6 224 663-907 511-765 (903)
405 KOG0608 Warts/lats-like serine 99.9 1.5E-24 3.3E-29 235.1 5.9 189 652-848 617-871 (1034)
406 PRK15387 E3 ubiquitin-protein 99.9 3.6E-23 7.8E-28 243.6 16.4 265 97-447 203-467 (788)
407 KOG0695 Serine/threonine prote 99.9 2.6E-24 5.5E-29 217.0 5.8 175 660-848 249-451 (593)
408 KOG1152 Signal transduction se 99.9 4.3E-24 9.3E-29 230.2 4.5 168 660-843 560-764 (772)
409 PRK15387 E3 ubiquitin-protein 99.9 1.1E-22 2.3E-27 239.7 16.5 264 201-549 202-465 (788)
410 PRK15370 E3 ubiquitin-protein 99.9 4.3E-22 9.2E-27 236.4 17.9 356 25-465 60-473 (754)
411 smart00220 S_TKc Serine/Threon 99.9 6.5E-23 1.4E-27 216.4 8.7 201 686-908 31-240 (244)
412 KOG0665 Jun-N-terminal kinase 99.9 2.2E-23 4.8E-28 210.8 3.3 213 685-908 58-309 (369)
413 KOG0668 Casein kinase II, alph 99.9 1.1E-23 2.5E-28 202.4 0.3 170 659-841 36-226 (338)
414 KOG1345 Serine/threonine kinas 99.9 3.2E-22 7E-27 197.3 6.4 229 661-911 24-286 (378)
415 KOG1167 Serine/threonine prote 99.9 3.6E-22 7.9E-27 209.9 6.8 183 656-846 31-276 (418)
416 cd00180 PKc Catalytic domain o 99.8 1.1E-21 2.4E-26 201.9 8.1 186 669-909 1-214 (215)
417 PRK15370 E3 ubiquitin-protein 99.8 1E-20 2.2E-25 224.8 12.9 118 329-462 284-401 (754)
418 PLN00181 protein SPA1-RELATED; 99.8 4E-22 8.7E-27 246.1 1.1 196 697-908 27-264 (793)
419 PRK09188 serine/threonine prot 99.8 6.1E-21 1.3E-25 208.8 10.1 158 656-824 13-196 (365)
420 KOG1290 Serine/threonine prote 99.8 5.6E-21 1.2E-25 203.0 4.9 113 660-776 77-222 (590)
421 KOG0195 Integrin-linked kinase 99.8 4.5E-21 9.7E-26 188.8 -1.0 220 666-914 195-447 (448)
422 KOG0670 U4/U6-associated splic 99.8 4.9E-20 1.1E-24 196.5 3.9 171 660-847 431-634 (752)
423 smart00221 STYKc Protein kinas 99.8 1.2E-19 2.6E-24 189.3 5.9 168 663-843 1-195 (225)
424 cd00116 LRR_RI Leucine-rich re 99.8 4.2E-20 9.2E-25 204.2 -1.8 160 401-564 137-318 (319)
425 smart00750 KIND kinase non-cat 99.8 2.2E-19 4.7E-24 180.0 2.3 161 732-916 1-172 (176)
426 cd00116 LRR_RI Leucine-rich re 99.7 1.6E-19 3.5E-24 199.5 -0.3 209 325-541 78-319 (319)
427 KOG0617 Ras suppressor protein 99.7 1.3E-19 2.8E-24 167.0 -3.1 178 375-588 31-211 (264)
428 KOG0617 Ras suppressor protein 99.7 1.8E-19 4E-24 166.1 -3.8 165 91-294 29-193 (264)
429 KOG0590 Checkpoint kinase and 99.7 4.2E-18 9E-23 199.0 5.1 232 665-908 322-584 (601)
430 PRK10359 lipopolysaccharide co 99.7 7.5E-18 1.6E-22 171.2 6.3 157 660-838 30-212 (232)
431 PLN03150 hypothetical protein; 99.7 1.1E-16 2.5E-21 190.0 13.2 151 23-180 367-527 (623)
432 KOG1164 Casein kinase (serine/ 99.7 1.8E-16 3.9E-21 174.6 11.3 241 662-917 19-301 (322)
433 PRK12274 serine/threonine prot 99.6 1.6E-16 3.5E-21 157.7 7.3 117 664-792 5-142 (218)
434 KOG4158 BRPK/PTEN-induced prot 99.6 3.6E-17 7.8E-22 169.8 2.6 198 700-909 274-510 (598)
435 COG0515 SPS1 Serine/threonine 99.6 3E-16 6.4E-21 173.7 7.8 234 663-909 2-275 (384)
436 KOG1023 Natriuretic peptide re 99.6 1.1E-16 2.3E-21 178.2 4.1 204 696-915 1-226 (484)
437 PRK09605 bifunctional UGMP fam 99.6 4.5E-16 9.8E-21 183.2 7.0 132 652-792 324-477 (535)
438 PRK10345 hypothetical protein; 99.6 2E-15 4.3E-20 153.5 10.0 122 663-789 4-156 (210)
439 PLN03150 hypothetical protein; 99.6 1E-14 2.2E-19 173.4 11.3 115 482-596 419-538 (623)
440 cd05147 RIO1_euk RIO kinase fa 99.6 4.2E-15 9.1E-20 149.8 6.6 116 666-792 2-167 (190)
441 KOG0603 Ribosomal protein S6 k 99.5 5.8E-16 1.3E-20 171.7 -0.7 161 669-849 2-192 (612)
442 cd05145 RIO1_like RIO kinase f 99.5 1.1E-14 2.3E-19 147.6 8.5 116 666-792 2-167 (190)
443 KOG0606 Microtubule-associated 99.5 1E-15 2.2E-20 177.5 1.0 211 661-901 83-304 (1205)
444 KOG1163 Casein kinase (serine/ 99.5 3.5E-14 7.6E-19 138.6 7.7 189 653-851 8-224 (341)
445 TIGR03724 arch_bud32 Kae1-asso 99.5 3.5E-14 7.6E-19 145.3 7.5 115 668-791 1-138 (199)
446 KOG1033 eIF-2alpha kinase PEK/ 99.5 1.8E-15 4E-20 164.7 -3.0 116 720-841 329-455 (516)
447 PRK14879 serine/threonine prot 99.5 4.8E-14 1E-18 145.7 7.6 116 667-791 2-143 (211)
448 KOG0532 Leucine-rich repeat (L 99.5 4.6E-15 9.9E-20 161.2 -0.8 196 326-540 73-271 (722)
449 cd05144 RIO2_C RIO kinase fami 99.5 8.8E-14 1.9E-18 142.1 8.4 127 654-792 8-175 (198)
450 KOG1165 Casein kinase (serine/ 99.5 1.3E-13 2.9E-18 140.7 9.3 180 662-850 29-238 (449)
451 KOG0532 Leucine-rich repeat (L 99.4 8.1E-15 1.8E-19 159.3 -3.8 169 357-542 79-247 (722)
452 KOG1166 Mitotic checkpoint ser 99.4 2.1E-13 4.6E-18 162.3 5.7 235 655-916 692-956 (974)
453 smart00090 RIO RIO-like kinase 99.4 5.5E-13 1.2E-17 139.2 8.1 118 662-792 29-198 (237)
454 KOG1266 Protein kinase [Signal 99.4 1.5E-13 3.3E-18 140.2 2.8 197 695-908 120-330 (458)
455 KOG1240 Protein kinase contain 99.3 4.2E-14 9.1E-19 164.3 -3.9 225 662-909 24-291 (1431)
456 COG4886 Leucine-rich repeat (L 99.3 1.4E-12 3.1E-17 148.5 7.2 180 377-572 116-296 (394)
457 PRK01723 3-deoxy-D-manno-octul 99.3 4.1E-12 8.9E-17 132.9 8.8 101 687-791 85-191 (239)
458 cd05120 APH_ChoK_like Aminogly 99.3 3.8E-12 8.3E-17 123.6 6.8 122 666-792 3-139 (155)
459 COG4886 Leucine-rich repeat (L 99.3 4.8E-12 1E-16 144.1 8.6 201 332-550 97-298 (394)
460 PF14531 Kinase-like: Kinase-l 99.3 9.8E-13 2.1E-17 138.1 2.1 209 663-900 14-288 (288)
461 KOG0590 Checkpoint kinase and 99.3 7.5E-13 1.6E-17 155.1 0.3 231 661-907 20-284 (601)
462 cd05119 RIO RIO kinase family, 99.2 1.7E-11 3.7E-16 124.0 6.5 67 722-792 90-164 (187)
463 KOG1259 Nischarin, modulator o 99.1 2E-11 4.4E-16 122.9 2.0 137 419-569 278-415 (490)
464 KOG3207 Beta-tubulin folding c 99.1 8.9E-12 1.9E-16 132.2 -0.7 212 92-341 118-339 (505)
465 KOG1259 Nischarin, modulator o 99.1 1.8E-11 3.8E-16 123.4 1.0 132 375-544 282-414 (490)
466 PF14580 LRR_9: Leucine-rich r 99.1 4.8E-11 1E-15 116.6 3.5 130 90-231 14-147 (175)
467 KOG0531 Protein phosphatase 1, 99.1 2.5E-11 5.4E-16 138.5 0.3 213 354-587 96-316 (414)
468 KOG0531 Protein phosphatase 1, 99.0 2.3E-11 5.1E-16 138.7 -0.9 248 92-395 69-323 (414)
469 PF14580 LRR_9: Leucine-rich r 99.0 2.5E-10 5.4E-15 111.6 3.8 79 479-559 62-146 (175)
470 KOG3207 Beta-tubulin folding c 99.0 7.1E-11 1.5E-15 125.5 -0.3 167 140-313 118-287 (505)
471 KOG1909 Ran GTPase-activating 99.0 7.9E-12 1.7E-16 129.3 -7.7 265 114-437 25-310 (382)
472 TIGR01982 UbiB 2-polyprenylphe 99.0 7.5E-10 1.6E-14 126.1 7.1 98 689-793 200-308 (437)
473 cd05151 ChoK Choline Kinase (C 99.0 1.1E-09 2.3E-14 108.9 7.1 118 666-791 3-136 (170)
474 PF08263 LRRNT_2: Leucine rich 98.9 1.2E-09 2.6E-14 80.4 4.2 40 27-67 2-43 (43)
475 KOG1909 Ran GTPase-activating 98.9 8.7E-11 1.9E-15 121.7 -2.9 231 87-341 22-283 (382)
476 KOG4658 Apoptotic ATPase [Sign 98.8 1.1E-08 2.4E-13 124.5 9.1 148 73-232 525-676 (889)
477 PF13855 LRR_8: Leucine rich r 98.8 4.5E-09 9.8E-14 84.4 3.3 59 482-540 2-60 (61)
478 PF13855 LRR_8: Leucine rich r 98.7 1.6E-08 3.6E-13 81.2 5.2 60 354-413 2-61 (61)
479 PRK04750 ubiB putative ubiquin 98.7 1.8E-08 3.9E-13 116.0 5.6 73 722-794 236-316 (537)
480 KOG1859 Leucine-rich repeat pr 98.7 8.8E-10 1.9E-14 123.5 -5.0 110 476-590 182-293 (1096)
481 KOG0601 Cyclin-dependent kinas 98.6 1.1E-08 2.4E-13 114.6 2.6 167 663-840 116-319 (524)
482 COG3642 Mn2+-dependent serine/ 98.6 8.9E-08 1.9E-12 92.0 6.8 96 687-791 44-140 (204)
483 KOG1859 Leucine-rich repeat pr 98.6 9.4E-10 2E-14 123.3 -8.3 127 274-414 165-292 (1096)
484 KOG4658 Apoptotic ATPase [Sign 98.6 7.9E-08 1.7E-12 117.2 7.1 128 200-338 523-652 (889)
485 KOG0601 Cyclin-dependent kinas 98.5 4.7E-08 1E-12 109.6 3.5 226 657-912 261-517 (524)
486 KOG3087 Serine/threonine prote 98.5 3.1E-07 6.6E-12 87.7 7.3 118 665-790 11-164 (229)
487 KOG0606 Microtubule-associated 98.4 6.1E-08 1.3E-12 114.1 0.3 231 659-904 802-1084(1205)
488 KOG1243 Protein kinase [Genera 98.3 2.3E-06 4.9E-11 97.1 9.9 115 669-792 34-155 (690)
489 cd05154 ACAD10_11_like Acyl-Co 98.3 1.9E-06 4.2E-11 89.5 8.4 123 667-791 4-206 (223)
490 cd05146 RIO3_euk RIO kinase fa 98.3 1.4E-06 3E-11 87.2 6.2 90 690-792 74-174 (197)
491 KOG2982 Uncharacterized conser 98.2 1E-07 2.3E-12 96.7 -2.1 45 292-342 219-263 (418)
492 KOG4579 Leucine-rich repeat (L 98.1 3.4E-07 7.3E-12 82.7 -1.6 104 354-461 28-135 (177)
493 PF01163 RIO1: RIO1 family; I 98.1 7.2E-06 1.6E-10 81.8 7.5 93 686-791 52-155 (188)
494 PRK15123 lipopolysaccharide co 98.1 4.5E-06 9.7E-11 88.4 5.7 101 688-791 74-194 (268)
495 KOG2982 Uncharacterized conser 98.1 9.7E-07 2.1E-11 89.9 0.6 119 109-236 35-158 (418)
496 KOG4579 Leucine-rich repeat (L 98.1 3.3E-07 7.2E-12 82.8 -2.6 87 482-571 78-164 (177)
497 KOG0576 Mitogen-activated prot 98.0 1.4E-06 3E-11 97.9 1.3 160 657-836 238-418 (829)
498 KOG2137 Protein kinase [Signal 98.0 4.2E-06 9.2E-11 95.4 4.8 149 746-907 106-263 (700)
499 PF06293 Kdo: Lipopolysacchari 97.9 1.7E-05 3.6E-10 81.3 6.6 101 687-791 56-170 (206)
500 PF12799 LRR_4: Leucine Rich r 97.9 7E-06 1.5E-10 60.4 2.2 36 120-156 2-37 (44)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.1e-107 Score=1033.92 Aligned_cols=851 Identities=30% Similarity=0.482 Sum_probs=611.2
Q ss_pred ChhhHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcceeeCCCCCcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecC
Q 002376 26 INTDKEALMSFKSQISQESPSSPLSYWNPSSSPCTWPGVICNNFGNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNN 105 (929)
Q Consensus 26 ~~~~~~aLl~~k~~~~~~~~~~~l~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N 105 (929)
.++|++||++||+++. + |.+.+.+|+.+.+||.|.||+|++. ++|+.|||++++++|.+++.+..+++|++|+|++|
T Consensus 27 ~~~~~~~l~~~~~~~~-~-~~~~~~~w~~~~~~c~w~gv~c~~~-~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n 103 (968)
T PLN00113 27 HAEELELLLSFKSSIN-D-PLKYLSNWNSSADVCLWQGITCNNS-SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNN 103 (968)
T ss_pred CHHHHHHHHHHHHhCC-C-CcccCCCCCCCCCCCcCcceecCCC-CcEEEEEecCCCccccCChHHhCCCCCCEEECCCC
Confidence 5799999999999985 3 6778899998889999999999874 59999999999999999999999999999999999
Q ss_pred CCCCCCCcCCC-CCCCCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhccCCCCcEEEccccccCCCC
Q 002376 106 KLSGNLPREIG-NLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSI 184 (929)
Q Consensus 106 ~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~ 184 (929)
+++|.+|..+. .+++|++|+|++|++++.+|. +.+++|++|+|++|.+++.+|.. ++++++|++|+|++|.+.+.+
T Consensus 104 ~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~-~~~l~~L~~L~L~~n~l~~~~ 180 (968)
T PLN00113 104 QLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPND-IGSFSSLKVLDLGGNVLVGKI 180 (968)
T ss_pred ccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChH-HhcCCCCCEEECccCcccccC
Confidence 99999998765 899999999999999887775 45778888888888887766665 788888888888888877766
Q ss_pred Ccccccc----------------CCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCC
Q 002376 185 PPSIANL----------------IPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTL 248 (929)
Q Consensus 185 p~~i~~l----------------~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l 248 (929)
|.++.++ +|..|+++++|+.|+|++|++++.+|..|.++++|++|+|++|++++.+|..+.. +
T Consensus 181 p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~-l 259 (968)
T PLN00113 181 PNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGN-L 259 (968)
T ss_pred ChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhC-C
Confidence 6544321 3445555666666666666666666666666666666666666666555555443 5
Q ss_pred CCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCC
Q 002376 249 PNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNST 328 (929)
Q Consensus 249 ~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~ 328 (929)
++|+.|++++|++++.+|..+.++++|+.|++++|.+.+.+|..+.++++|+.|++++|.+.... +..+..++
T Consensus 260 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~-------~~~~~~l~ 332 (968)
T PLN00113 260 KNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKI-------PVALTSLP 332 (968)
T ss_pred CCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcC-------ChhHhcCC
Confidence 66666666666666666666666666666666666666666666666666666666666554322 13455666
Q ss_pred CCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEe
Q 002376 329 HLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGL 408 (929)
Q Consensus 329 ~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 408 (929)
+|+.|+|++|.+++.+|..++.+. +|+.|++++|++++.+|..+..+++|+.|++++|.+.+.+|..+..+++|+.|++
T Consensus 333 ~L~~L~L~~n~l~~~~p~~l~~~~-~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L 411 (968)
T PLN00113 333 RLQVLQLWSNKFSGEIPKNLGKHN-NLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRL 411 (968)
T ss_pred CCCEEECcCCCCcCcCChHHhCCC-CCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEEC
Confidence 667777777777666666666655 5667777777666666666666666666666666666666666666666666666
Q ss_pred cCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCc---------------ccCC
Q 002376 409 AGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGI---------------LRPL 473 (929)
Q Consensus 409 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~---------------~~~~ 473 (929)
++|++++.+|..|.++++|+.||+++|++++.+|..+..+++|+.|+|++|++.|.+|... ....
T Consensus 412 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~ 491 (968)
T PLN00113 412 QDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAV 491 (968)
T ss_pred cCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCcc
Confidence 6666666666666666666666666666666666666666666666666666655554321 1234
Q ss_pred chhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCC
Q 002376 474 PEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQ 553 (929)
Q Consensus 474 p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 553 (929)
|..+..+++|+.|+|++|++++.+|..+.++++|++|+|++|+++|.+|..|..+++|+.|||++|+++|.+|..+.+++
T Consensus 492 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 571 (968)
T PLN00113 492 PRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVE 571 (968)
T ss_pred ChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCc
Confidence 77888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEeCCCCcCcccCCCCCCCCCCCcccccCCCCCcCCC------CCCCCCCCCCcceeehhhHHHHHHHHHHHHhhhh
Q 002376 554 ALRSLNLTFNNLEGVVPSEGIFRNMSNVHLKGNPKLCLQL------GCENPRSHGSRLIILSIIVTIMAVIAGCFLIVWP 627 (929)
Q Consensus 554 ~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~N~~~c~~~------~c~~~~~~~~~~~~i~i~~~~~~~l~~~~~~~~~ 627 (929)
+|+.|++++|+++|.+|..++|.++....+.||+.+|+.+ +|.... +...+..++++++ +++++++++++.+
T Consensus 572 ~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~ 649 (968)
T PLN00113 572 SLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVR-KTPSWWFYITCTL-GAFLVLALVAFGF 649 (968)
T ss_pred ccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCcccc-ccceeeeehhHHH-HHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999754 454321 1122222222222 2222222222222
Q ss_pred hhhhcccccc-cccc---cccc------ccCCCCChHHHHHhhCCCCCceeecccCceeEEeccccCc------------
Q 002376 628 IIVRKRKAKR-VGVS---ALFK------VCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTGS------------ 685 (929)
Q Consensus 628 ~~~rrr~~~~-~~~~---~~~~------~~~~~~~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~------------ 685 (929)
+++++|+..+ ...+ ..+. .....++++++. +.|+..++||+|+||+||+|+....
T Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~ 726 (968)
T PLN00113 650 VFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDV 726 (968)
T ss_pred HHHHhhhcccccccccccccccccccccccchhhhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCC
Confidence 2223222111 1100 0010 001123444443 4577888999999999999986411
Q ss_pred HHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEecCCCCccccccc-----cccccccHHHHHHHhhhCCC
Q 002376 686 WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG-----ERKNELDITSALDYLHNDCE 760 (929)
Q Consensus 686 ~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~-----~~~~~~~ia~aL~yLH~~~~ 760 (929)
.....+|++.+++++|||||+++|+|.+.+ ..|+|||||++|+|.++++. ...++.|||+||+|||+.+.
T Consensus 727 ~~~~~~~~~~l~~l~HpnIv~~~~~~~~~~-----~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~ 801 (968)
T PLN00113 727 NSIPSSEIADMGKLQHPNIVKLIGLCRSEK-----GAYLIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCS 801 (968)
T ss_pred ccccHHHHHHHhhCCCCCcceEEEEEEcCC-----CCEEEEeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCC
Confidence 112346799999999999999999996543 37999999999999999863 23457899999999998777
Q ss_pred CCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCC
Q 002376 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGE 840 (929)
Q Consensus 761 ~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~ 840 (929)
++|+|||+||+||++++++.+++. ||.+..... .....||++|||||++.+..++.++||||+|+++||
T Consensus 802 ~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~e 870 (968)
T PLN00113 802 PAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT----------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIE 870 (968)
T ss_pred CCeecCCCCHHhEEECCCCceEEE-ecccccccc----------CCCccccccccCcccccCCCCCcccchhhHHHHHHH
Confidence 799999999999999999988886 666543211 112368899999999999999999999999999888
Q ss_pred cchhHHhhhcCCc----------------hhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHH
Q 002376 841 FNIVKWVESNLPE----------------NVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIR 904 (929)
Q Consensus 841 ~~~~~~~~~~~~~----------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ 904 (929)
+.....++..... .....+|+.+... .....+.+.++++ ++.+||+.||++||+|+
T Consensus 871 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-l~~~Cl~~~P~~RPt~~ 942 (968)
T PLN00113 871 LLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGD-------VSVNQNEIVEVMN-LALHCTATDPTARPCAN 942 (968)
T ss_pred HHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCC-------CCccHHHHHHHHH-HHHhhCcCCchhCcCHH
Confidence 7665544321100 0111112211110 0011233445555 99999999999999999
Q ss_pred HHHHHHHhhHHHHhhc
Q 002376 905 EALRRLKSSQEILLKQ 920 (929)
Q Consensus 905 ev~~~L~~~~~~~~~~ 920 (929)
||+++|+++.+.....
T Consensus 943 evl~~L~~~~~~~~~~ 958 (968)
T PLN00113 943 DVLKTLESASRSSSSC 958 (968)
T ss_pred HHHHHHHHhhcccccc
Confidence 9999999987755433
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.1e-58 Score=584.23 Aligned_cols=485 Identities=33% Similarity=0.513 Sum_probs=361.9
Q ss_pred CCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccc-cccccceecccccccCCCCChhhhccCCCCcEE
Q 002376 95 SFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNIS-KLTELKMLDLMANKITGRVTDDQLRNLRSLQVL 173 (929)
Q Consensus 95 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L 173 (929)
.+++.|||++|+++|.+|..|..+++|++|+|++|++++.+|..+. ++++|++|||++|+++|.+|. +.+++|++|
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~---~~l~~L~~L 145 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR---GSIPNLETL 145 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc---cccCCCCEE
Confidence 3689999999999999999999999999999999999999997765 999999999999999988875 468999999
Q ss_pred EccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcce
Q 002376 174 NFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLD 253 (929)
Q Consensus 174 ~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~ 253 (929)
+|++|.+++.+|..+. .+++|++|+|++|.+.+..|..|.++++|++|+|++|++.+.+|..+.. +++|+.
T Consensus 146 ~Ls~n~~~~~~p~~~~--------~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~-l~~L~~ 216 (968)
T PLN00113 146 DLSNNMLSGEIPNDIG--------SFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQ-MKSLKW 216 (968)
T ss_pred ECcCCcccccCChHHh--------cCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcC-cCCccE
Confidence 9999999887775443 4455555555555555555555555555555555555555555544433 455555
Q ss_pred eeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCC-----------------
Q 002376 254 FIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDE----------------- 316 (929)
Q Consensus 254 l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~----------------- 316 (929)
|++++|++++.+|..+.++++|+.|++++|.+++.+|..|+++++|++|++++|++.......
T Consensus 217 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l 296 (968)
T PLN00113 217 IYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSL 296 (968)
T ss_pred EECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCee
Confidence 555555555555555555555555555555555555555555555555555555443211100
Q ss_pred CCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCcc
Q 002376 317 GLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIE 396 (929)
Q Consensus 317 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 396 (929)
.-..+..+.++++|++|++++|.+++.+|..+..++ +|+.|+|++|.+.+.+|..++.+++|+.|+|++|++++.+|..
T Consensus 297 ~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~ 375 (968)
T PLN00113 297 SGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLP-RLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEG 375 (968)
T ss_pred ccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCC-CCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChh
Confidence 000123455666777777777777766776666665 5777777777777777777777777777777777777777777
Q ss_pred ccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCc-------
Q 002376 397 IGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGI------- 469 (929)
Q Consensus 397 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~------- 469 (929)
+..+++|+.|++++|.+.+.+|..+..+++|+.|++++|++++.+|..|.++++|+.|++++|+++|.+|...
T Consensus 376 ~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 455 (968)
T PLN00113 376 LCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQ 455 (968)
T ss_pred HhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCc
Confidence 7777777777777777777778888888888888888888888888888888888889999888888765421
Q ss_pred ---------ccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCc
Q 002376 470 ---------LRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNK 540 (929)
Q Consensus 470 ---------~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 540 (929)
...+|..+ ..++|+.|||++|++++.+|..|.++++|++|+|++|++++.+|..+..+++|++|+|++|+
T Consensus 456 ~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 534 (968)
T PLN00113 456 MLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQ 534 (968)
T ss_pred EEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCc
Confidence 11233322 34678999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCcccccCCCCCeEeCCCCcCcccCCCC-CCCCCCCcccccCCCCCcCCC
Q 002376 541 LSGSIPSDLQNLQALRSLNLTFNNLEGVVPSE-GIFRNMSNVHLKGNPKLCLQL 593 (929)
Q Consensus 541 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~~~l~~l~l~~N~~~c~~~ 593 (929)
++|.+|..+.++++|+.|+|++|+++|.+|.. ..+..++.+++++|+..+..|
T Consensus 535 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 535 LSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred ccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 99999999999999999999999999999975 457789999999999877443
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-45 Score=399.42 Aligned_cols=252 Identities=37% Similarity=0.621 Sum_probs=203.7
Q ss_pred cCCCCChHHHHHhhCCCCCceeecccCceeEEecccc--------------Cc-HHHHHHHHHHHHccCCccccceeeec
Q 002376 647 CHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERT--------------GS-WKSFIAECETLRNVRHRNLVKLITSC 711 (929)
Q Consensus 647 ~~~~~~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~--------------~~-~~~~~~E~~~l~~l~Hpniv~l~~~~ 711 (929)
....|+++|+++||++|+..+.||+|+||.||+|... .. .++|.+|+.++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 3456999999999999999999999999999998765 12 56799999999999999999999999
Q ss_pred ccCCCCCcceEEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCce
Q 002376 712 SSLDSKNMEFLALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA 781 (929)
Q Consensus 712 ~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ 781 (929)
.+.+. ..+||||||++|+|.++++... +++.++|+||+|||..+.++||||||||+|||+|+++++
T Consensus 141 ~e~~~----~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~a 216 (361)
T KOG1187|consen 141 LEGGE----HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNA 216 (361)
T ss_pred ecCCc----eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCE
Confidence 76442 4799999999999999998544 568999999999999998999999999999999999999
Q ss_pred EEeccccccccccccCCCCCcccccee-ccccccccccccCCCCCCCCCCCCCCcCCCCCcc----------------hh
Q 002376 782 KVGDFGLARFLLERVDNQSSISSTHVF-MGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFN----------------IV 844 (929)
Q Consensus 782 ki~DfGla~~~~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~----------------~~ 844 (929)
||+|||+|+..+.. ....... .||.+|+|||++..+..+.|+||||||+++.|+. +.
T Consensus 217 KlsDFGLa~~~~~~------~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~ 290 (361)
T KOG1187|consen 217 KLSDFGLAKLGPEG------DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLV 290 (361)
T ss_pred EccCccCcccCCcc------ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHH
Confidence 99999999765320 1111112 7999999999999999999999999998765532 44
Q ss_pred HHhhhcCCc-hhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 845 KWVESNLPE-NVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 845 ~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
.|+.....+ .+.+++|+.+... . ....+++.++++ +|.+|++.+|.+||+|.||+++|+.+...
T Consensus 291 ~w~~~~~~~~~~~eiiD~~l~~~----~---~~~~~~~~~~~~-~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 291 EWAKPLLEEGKLREIVDPRLKEG----E---YPDEKEVKKLAE-LALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHHHHHHHCcchhheeCCCccCC----C---CChHHHHHHHHH-HHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 555444444 4666677766520 0 000135666777 99999999999999999999999665443
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-42 Score=369.95 Aligned_cols=370 Identities=24% Similarity=0.275 Sum_probs=303.3
Q ss_pred ceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCC
Q 002376 146 KMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTS 225 (929)
Q Consensus 146 ~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 225 (929)
++||+|+|+++ .+....|.++++|+.+++.+|.++ . +|..-....+|+.|+|.+|.|+.+..+.+..++.
T Consensus 81 ~~LdlsnNkl~-~id~~~f~nl~nLq~v~l~~N~Lt-~--------IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~a 150 (873)
T KOG4194|consen 81 QTLDLSNNKLS-HIDFEFFYNLPNLQEVNLNKNELT-R--------IPRFGHESGHLEKLDLRHNLISSVTSEELSALPA 150 (873)
T ss_pred eeeeccccccc-cCcHHHHhcCCcceeeeeccchhh-h--------cccccccccceeEEeeeccccccccHHHHHhHhh
Confidence 45666666665 555555666666666666666652 2 2222233456888888888888888888888888
Q ss_pred CceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccc
Q 002376 226 LVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIG 305 (929)
Q Consensus 226 L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 305 (929)
|+.||||.|.|+ +||..-+..-.++++|+|++|+++...-+.|.++.+|..|.|++|+++...+..|++|++|+.|+|.
T Consensus 151 lrslDLSrN~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLn 229 (873)
T KOG4194|consen 151 LRSLDLSRNLIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLN 229 (873)
T ss_pred hhhhhhhhchhh-cccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhcc
Confidence 888888888887 7887777766788888888888888888899999999999999999997777889999999999999
Q ss_pred cccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEee
Q 002376 306 FNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLS 385 (929)
Q Consensus 306 ~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 385 (929)
.|+|..... ..|.++++|+.|.|..|.+...-...|..+. ++++|+|+.|+++..-..++.++++|+.||||
T Consensus 230 rN~irive~-------ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~-kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS 301 (873)
T KOG4194|consen 230 RNRIRIVEG-------LTFQGLPSLQNLKLQRNDISKLDDGAFYGLE-KMEHLNLETNRLQAVNEGWLFGLTSLEQLDLS 301 (873)
T ss_pred ccceeeehh-------hhhcCchhhhhhhhhhcCcccccCcceeeec-ccceeecccchhhhhhcccccccchhhhhccc
Confidence 999875422 3578889999999999999854444555555 79999999999998888999999999999999
Q ss_pred CCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCC
Q 002376 386 YNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNI 465 (929)
Q Consensus 386 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i 465 (929)
+|.|..+.++.+...++|++|+|+.|+|+...+.+|..+..|+.|+|++|+++..-...|..+++|+.|||++|.|++.|
T Consensus 302 ~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~I 381 (873)
T KOG4194|consen 302 YNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCI 381 (873)
T ss_pred hhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEE
Confidence 99999888999999999999999999999999999999999999999999999888888999999999999999999877
Q ss_pred CCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCc
Q 002376 466 PKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNK 540 (929)
Q Consensus 466 ~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 540 (929)
..+ ...|..++.|+.|+|.+|++....-.+|.++..|+.|||.+|.|..+-|++|..+ .|+.|.++.-.
T Consensus 382 EDa-----a~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSss 450 (873)
T KOG4194|consen 382 EDA-----AVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSS 450 (873)
T ss_pred ecc-----hhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccc
Confidence 543 4456778888888888888886555788888888888888888888888888888 88888775543
No 5
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=2.5e-45 Score=377.21 Aligned_cols=473 Identities=30% Similarity=0.436 Sum_probs=280.6
Q ss_pred EEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccc
Q 002376 73 VIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMA 152 (929)
Q Consensus 73 v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 152 (929)
...+++++|.++ .+.+.+.+|..|++|++++|+++ ..|++++.+..++.|+.|+|+++ .+|+.++.+.+|+.|+.++
T Consensus 47 l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~ 123 (565)
T KOG0472|consen 47 LQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSS 123 (565)
T ss_pred hhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccc
Confidence 456778888887 66778888888888888888887 78888888888888888888888 7888888888888888888
Q ss_pred cccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEee
Q 002376 153 NKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLA 232 (929)
Q Consensus 153 N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 232 (929)
|.+. .++++ ++.+-.|+.|+..+|+++. .|+++..+.+|..|++.+|++....|..+. ++.|++||..
T Consensus 124 n~~~-el~~~-i~~~~~l~dl~~~~N~i~s---------lp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~ 191 (565)
T KOG0472|consen 124 NELK-ELPDS-IGRLLDLEDLDATNNQISS---------LPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCN 191 (565)
T ss_pred ccee-ecCch-HHHHhhhhhhhcccccccc---------CchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccc
Confidence 8887 67776 7888888888888887643 456667778888888888888855554444 8888888888
Q ss_pred ecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCC
Q 002376 233 SNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSS 312 (929)
Q Consensus 233 ~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~ 312 (929)
+|.++ .+|.+++. +.+|..|++..|++.. .| +|.+++.|.+++++.|+|+-...+..++++++.+|||..|++++.
T Consensus 192 ~N~L~-tlP~~lg~-l~~L~~LyL~~Nki~~-lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke~ 267 (565)
T KOG0472|consen 192 SNLLE-TLPPELGG-LESLELLYLRRNKIRF-LP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKEV 267 (565)
T ss_pred hhhhh-cCChhhcc-hhhhHHHHhhhccccc-CC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccccC
Confidence 88876 77777766 7777777777777763 44 677777777777777777733333345777777777777777766
Q ss_pred CCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCC-----CCcccE----EE
Q 002376 313 GDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGR-----LRSLTL----LD 383 (929)
Q Consensus 313 ~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~----L~ 383 (929)
++ .+.-+.+|++||+|+|.|+ .+|.+++++ .|+.|-+.+|.+...-.+.+.+ ++.|+. =-
T Consensus 268 Pd--------e~clLrsL~rLDlSNN~is-~Lp~sLgnl--hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dg 336 (565)
T KOG0472|consen 268 PD--------EICLLRSLERLDLSNNDIS-SLPYSLGNL--HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDG 336 (565)
T ss_pred ch--------HHHHhhhhhhhcccCCccc-cCCcccccc--eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCC
Confidence 54 3455667777777777777 566677766 4777777777664211100000 000000 00
Q ss_pred eeCCCC----CcccC----ccccCCCCCCEEEecCCcCCCCCcccccCCCC---CceecccCcccccccCcccccccccc
Q 002376 384 LSYNSI----SGEIP----IEIGQLQGLQVLGLAGNEIPGGIPNSLANLKK---LNQIDLSGNELTGEIPISFGNFQSLL 452 (929)
Q Consensus 384 Ls~N~l----~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~~~p~~~~~l~~L~ 452 (929)
+|.-+= .+..| .....+.+.+.|++++-+++. +|+......+ ....+++.|++. ++|..+..+..+.
T Consensus 337 lS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~-VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelv 414 (565)
T KOG0472|consen 337 LSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTL-VPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELV 414 (565)
T ss_pred CCCCcccccccCCCCCCcccchhhhhhhhhhccccccccc-CCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHH
Confidence 000000 00000 011123334445555555542 2222222111 444455555554 3444444443332
Q ss_pred e-ecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCC
Q 002376 453 S-IDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGL 531 (929)
Q Consensus 453 ~-L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 531 (929)
+ +.+++|.++ .+ |..++.+++|+.|+|++|-+. .+|..++.+..|+.||+|+|+|. .+|..+-.+..|
T Consensus 415 T~l~lsnn~is-fv--------~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~l 483 (565)
T KOG0472|consen 415 TDLVLSNNKIS-FV--------PLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTL 483 (565)
T ss_pred HHHHhhcCccc-cc--------hHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHH
Confidence 2 233333332 22 444444555555555544443 34444555555555555555444 344444444444
Q ss_pred CEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCCCCCCCCCCCcccccCCCC
Q 002376 532 EVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVHLKGNPK 588 (929)
Q Consensus 532 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~N~~ 588 (929)
+.+-.++|++....|+.+.+|.+|..|||.+|.+...+|..+.+.++..+.+.|||+
T Consensus 484 Etllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpf 540 (565)
T KOG0472|consen 484 ETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPF 540 (565)
T ss_pred HHHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCcc
Confidence 444444455543333344455555555555555554444444445555555555543
No 6
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=2.1e-43 Score=363.01 Aligned_cols=456 Identities=27% Similarity=0.400 Sum_probs=328.3
Q ss_pred CCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhccCCCCcEEE
Q 002376 95 SFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLN 174 (929)
Q Consensus 95 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~ 174 (929)
.-|+.|++++|.+. .+-+.+.+|..|.+|++.+|+++ ..|.+++.+..++.|+.|+|+++ .+|++ ++.+.+|..|+
T Consensus 45 v~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~-i~s~~~l~~l~ 120 (565)
T KOG0472|consen 45 VDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQ-IGSLISLVKLD 120 (565)
T ss_pred cchhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHH-Hhhhhhhhhhh
Confidence 35788999999998 66667888999999999999999 78888999999999999999998 78877 89999999999
Q ss_pred ccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCccee
Q 002376 175 FGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDF 254 (929)
Q Consensus 175 Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l 254 (929)
.++|.+.. .|++++.+..|+.|+..+|+++ ..|+.++++.+|..|++.+|++. .+|.+..+ ++.|+.+
T Consensus 121 ~s~n~~~e---------l~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~-~l~~~~i~-m~~L~~l 188 (565)
T KOG0472|consen 121 CSSNELKE---------LPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK-ALPENHIA-MKRLKHL 188 (565)
T ss_pred ccccceee---------cCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchh-hCCHHHHH-HHHHHhc
Confidence 99998732 4556777888999999999998 67788888889999999999887 55555544 6667777
Q ss_pred eccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEE
Q 002376 255 IYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLA 334 (929)
Q Consensus 255 ~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~ 334 (929)
+...|-++ .+|..++.+.+|+.|+|.+|+|. .+| .|..+..|+.|+++.|+|...++ ....+++++.+||
T Consensus 189 d~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpa-------e~~~~L~~l~vLD 258 (565)
T KOG0472|consen 189 DCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPA-------EHLKHLNSLLVLD 258 (565)
T ss_pred ccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHH-------HHhcccccceeee
Confidence 76666654 46666666777777777777766 444 66666666666666666655543 2233566666666
Q ss_pred ccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccC-----CCCCCE----
Q 002376 335 LDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQ-----LQGLQV---- 405 (929)
Q Consensus 335 Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~---- 405 (929)
|.+|+++ ..|+.+..+. +|..||+|+|.|++ .|.+++++ .|+.|-+.+|.+..+-.+.+.. ++.|+.
T Consensus 259 LRdNklk-e~Pde~clLr-sL~rLDlSNN~is~-Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~ 334 (565)
T KOG0472|consen 259 LRDNKLK-EVPDEICLLR-SLERLDLSNNDISS-LPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKD 334 (565)
T ss_pred ccccccc-cCchHHHHhh-hhhhhcccCCcccc-CCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhcc
Confidence 6666666 5666666554 56666666666663 45556666 6666666666654211110000 001110
Q ss_pred EEecCCc----CCCC-Ccc---cccCCCCCceecccCcccccccCcccccccc---cceecccCCcCCCCCCCCcccCCc
Q 002376 406 LGLAGNE----IPGG-IPN---SLANLKKLNQIDLSGNELTGEIPISFGNFQS---LLSIDLSNNRINGNIPKGILRPLP 474 (929)
Q Consensus 406 L~L~~N~----l~~~-~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~g~i~~~~~~~~p 474 (929)
=.++.-+ =.+. .+. ....+.+.+.|++++-+++ .+|........ .+..+++.|++. .+ |
T Consensus 335 dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-el--------P 404 (565)
T KOG0472|consen 335 DGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-EL--------P 404 (565)
T ss_pred CCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hh--------h
Confidence 0000000 0000 111 1233457889999999998 56655433333 788999999996 34 6
Q ss_pred hhhhcccCccE-EEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCC
Q 002376 475 EEISRLENVVT-IDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQ 553 (929)
Q Consensus 475 ~~~~~l~~L~~-LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 553 (929)
..+..++.+++ +++++|.++ .+|..+..+++|..|+|++|-+. .+|..++.+..|+.||+|.|+|. .+|..+..+.
T Consensus 405 k~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq 481 (565)
T KOG0472|consen 405 KRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQ 481 (565)
T ss_pred hhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHH
Confidence 66666655544 566666665 88999999999999999999987 78999999999999999999998 7899888888
Q ss_pred CCCeEeCCCCcCcccCCCC-CCCCCCCcccccCCCCCcCCC
Q 002376 554 ALRSLNLTFNNLEGVVPSE-GIFRNMSNVHLKGNPKLCLQL 593 (929)
Q Consensus 554 ~L~~L~Ls~N~l~~~~p~~-~~~~~l~~l~l~~N~~~c~~~ 593 (929)
.|+.+-.++|++..+.|++ ..++++..+++.+|...-.+|
T Consensus 482 ~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp 522 (565)
T KOG0472|consen 482 TLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPP 522 (565)
T ss_pred HHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCCh
Confidence 8888888889999888874 568999999999998766555
No 7
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-40 Score=362.29 Aligned_cols=232 Identities=28% Similarity=0.417 Sum_probs=181.0
Q ss_pred ceeecccCceeEEeccccCc-----------------HHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEe
Q 002376 666 ENLIGSGSFGSVLHNERTGS-----------------WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF 728 (929)
Q Consensus 666 ~~~iG~G~~g~Vy~~~~~~~-----------------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~ 728 (929)
.+.||+|+||+||+|.+.+. .++|.+|+.+|++++|||||+++|+|.+... ..++||||
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~----~~~iVtEy 121 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG----SLCIVTEY 121 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC----ceEEEEEe
Confidence 35599999999999988732 3489999999999999999999999975431 37999999
Q ss_pred cCCCCcccccccc--c--------cccccHHHHHHHhhhCCCCC-EEecCCCCCCeeecCCC-ceEEecccccccccccc
Q 002376 729 LSNGSLGDWIHGE--R--------KNELDITSALDYLHNDCEVP-VVHSDLKPGNILLDEEM-TAKVGDFGLARFLLERV 796 (929)
Q Consensus 729 ~~~gsL~~~l~~~--~--------~~~~~ia~aL~yLH~~~~~~-iiHrDlk~~NILl~~~~-~~ki~DfGla~~~~~~~ 796 (929)
|++|+|.++++.. + .++.|||+||.|||+. + ||||||||+|||++.++ ++||+|||+++......
T Consensus 122 ~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~ 198 (362)
T KOG0192|consen 122 MPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK 198 (362)
T ss_pred CCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence 9999999999762 2 3378999999999998 5 99999999999999998 99999999998753211
Q ss_pred CCCCCccccceeccccccccccccC--CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhh
Q 002376 797 DNQSSISSTHVFMGSIGYVPPEYGL--GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQT 874 (929)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 874 (929)
...+...||+.|||||++. ...|+.|+||||||+++||+.+...++..... .++...-... ..+
T Consensus 199 ------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~--~~~~~~v~~~------~~R 264 (362)
T KOG0192|consen 199 ------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP--VQVASAVVVG------GLR 264 (362)
T ss_pred ------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhc------CCC
Confidence 2233368999999999999 56899999999999888887776666555543 1111111111 111
Q ss_pred hhhhH-HHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhh
Q 002376 875 IQLHD-CLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLK 919 (929)
Q Consensus 875 ~~~~~-~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 919 (929)
+..+. |...+.. ++.+||+.||++||++.|++.+|+.+...+..
T Consensus 265 p~~p~~~~~~l~~-l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 265 PPIPKECPPHLSS-LMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred CCCCccCCHHHHH-HHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 22111 3333444 77799999999999999999999999887664
No 8
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=9e-41 Score=357.78 Aligned_cols=366 Identities=25% Similarity=0.307 Sum_probs=288.7
Q ss_pred CCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhccCCCCcEEEcc
Q 002376 97 LRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFG 176 (929)
Q Consensus 97 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls 176 (929)
-+.|||++|+++..-+..|.++++|+.++|.+|.++ .||.......+|+.|+|.+|.|+ .+..+.+..++.|+.||||
T Consensus 80 t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~-sv~se~L~~l~alrslDLS 157 (873)
T KOG4194|consen 80 TQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLIS-SVTSEELSALPALRSLDLS 157 (873)
T ss_pred eeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccc-cccHHHHHhHhhhhhhhhh
Confidence 367888888888778888888888888888888888 77876666667888888888887 6777778888888888888
Q ss_pred ccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeec
Q 002376 177 KNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIY 256 (929)
Q Consensus 177 ~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l 256 (929)
.|.++. +--..|..-.++++|+|++|+|+....+.|.++.+|.+|.|+.|+|+ .+|...|+.+++|+.|+|
T Consensus 158 rN~is~--------i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrit-tLp~r~Fk~L~~L~~LdL 228 (873)
T KOG4194|consen 158 RNLISE--------IPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRIT-TLPQRSFKRLPKLESLDL 228 (873)
T ss_pred hchhhc--------ccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCccc-ccCHHHhhhcchhhhhhc
Confidence 887743 22234555667888888888888888888888888888888888888 788888888888888888
Q ss_pred cCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEcc
Q 002376 257 CFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALD 336 (929)
Q Consensus 257 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls 336 (929)
..|++.-..--.|.+|.+|+.|.|..|.+...-...|..|.++++|+|++|++..+.. ..+.+++.|+.|+||
T Consensus 229 nrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~-------g~lfgLt~L~~L~lS 301 (873)
T KOG4194|consen 229 NRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNE-------GWLFGLTSLEQLDLS 301 (873)
T ss_pred cccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhc-------ccccccchhhhhccc
Confidence 8888876556678888888888888888887777788888888888888888877654 456778888888888
Q ss_pred CCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCC
Q 002376 337 GNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGG 416 (929)
Q Consensus 337 ~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 416 (929)
+|.|...-+++.. +..+|++|+|++|+|+...+.+|..++.|++|+|++|++...--..|..+.+|+.|||++|.|+..
T Consensus 302 ~NaI~rih~d~Ws-ftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~ 380 (873)
T KOG4194|consen 302 YNAIQRIHIDSWS-FTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWC 380 (873)
T ss_pred hhhhheeecchhh-hcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEE
Confidence 8888855555544 344788888888888888888888888888888888888877677788888888888888888765
Q ss_pred Ccc---cccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecC
Q 002376 417 IPN---SLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSD 490 (929)
Q Consensus 417 ~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~ 490 (929)
+.+ .|.++++|+.|+|.+|+|..+.-.+|.++.+|+.|||.+|.|.. |. |..|..+ .|+.|-++.
T Consensus 381 IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaS-Iq-------~nAFe~m-~Lk~Lv~nS 448 (873)
T KOG4194|consen 381 IEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIAS-IQ-------PNAFEPM-ELKELVMNS 448 (873)
T ss_pred EecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCccee-ec-------ccccccc-hhhhhhhcc
Confidence 543 57788888888888888887666788888888888888888863 32 4445554 566655543
No 9
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2e-40 Score=342.45 Aligned_cols=232 Identities=24% Similarity=0.367 Sum_probs=177.5
Q ss_pred CCChHHHHHhhCCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecc
Q 002376 650 KISYDELRRATGNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCS 712 (929)
Q Consensus 650 ~~~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~ 712 (929)
.++.+|+++ .+.||+|..|+|||++++. ..+++.+|++++++++||+||+++|.|+
T Consensus 75 ~i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~ 147 (364)
T KOG0581|consen 75 GISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFY 147 (364)
T ss_pred ccCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE
Confidence 466677765 4789999999999998872 2578899999999999999999999997
Q ss_pred cCCCCCcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEe
Q 002376 713 SLDSKNMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVG 784 (929)
Q Consensus 713 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~ 784 (929)
.... .++++||||++|||+++++... .++.+|++||.|||+. ..||||||||+|||++..|++|||
T Consensus 148 ~~~~----~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKic 221 (364)
T KOG0581|consen 148 SNGE----EISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKIC 221 (364)
T ss_pred eCCc----eEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEec
Confidence 6431 4899999999999999987533 3477899999999973 289999999999999999999999
Q ss_pred ccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc---hhhhccCh
Q 002376 785 DFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE---NVLQVLDP 861 (929)
Q Consensus 785 DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~---~~~~~~~~ 861 (929)
|||.++.+.. +....++||..|||||-+.+..|+.++||||+|+.+.|+.+++++.....+ .+.+.++.
T Consensus 222 DFGVS~~lvn--------S~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~ 293 (364)
T KOG0581|consen 222 DFGVSGILVN--------SIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCA 293 (364)
T ss_pred cccccHHhhh--------hhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHH
Confidence 9999997632 134567999999999999999999999999999776666666555443211 22222222
Q ss_pred HHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 862 ELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 862 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
-.. ++.++.+...+-.++ ++++.+|++.||.+||+++|+++
T Consensus 294 Iv~-----~ppP~lP~~~fS~ef-~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 294 IVD-----EPPPRLPEGEFSPEF-RSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred Hhc-----CCCCCCCcccCCHHH-HHHHHHHhcCCcccCCCHHHHhc
Confidence 222 121111111122222 33677999999999999999874
No 10
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-39 Score=346.00 Aligned_cols=232 Identities=25% Similarity=0.358 Sum_probs=177.3
Q ss_pred CCceeecccCceeEEeccccC--------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEec
Q 002376 664 SHENLIGSGSFGSVLHNERTG--------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFL 729 (929)
Q Consensus 664 ~~~~~iG~G~~g~Vy~~~~~~--------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~ 729 (929)
+..+.||+|-||+||.|++.+ ..++|.+|+++|.+++|++||+++|+|...++ +|||||||
T Consensus 209 ~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~p-----iyIVtE~m 283 (468)
T KOG0197|consen 209 KLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEP-----IYIVTEYM 283 (468)
T ss_pred HHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCc-----eEEEEEec
Confidence 345789999999999998873 24689999999999999999999999976443 89999999
Q ss_pred CCCCcccccccc-c---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCC
Q 002376 730 SNGSLGDWIHGE-R---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799 (929)
Q Consensus 730 ~~gsL~~~l~~~-~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~ 799 (929)
+.|+|.+||+.. + .++.|||+||+||+++ ++|||||.++||||+++..|||+|||+||....+.-
T Consensus 284 ~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y-- 358 (468)
T KOG0197|consen 284 PKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY-- 358 (468)
T ss_pred ccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCce--
Confidence 999999999852 2 2367999999999998 999999999999999999999999999995432111
Q ss_pred CCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhH
Q 002376 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHD 879 (929)
Q Consensus 800 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 879 (929)
.......-...|.|||.+..++++.|+||||||++++|+.+. +..|. .+....++...+...... +....
T Consensus 359 ---~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~----G~~py--~~msn~ev~~~le~GyRl-p~P~~ 428 (468)
T KOG0197|consen 359 ---TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTY----GRVPY--PGMSNEEVLELLERGYRL-PRPEG 428 (468)
T ss_pred ---eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhcc----CCCCC--CCCCHHHHHHHHhccCcC-CCCCC
Confidence 111112236689999999999999999999999999996544 33331 111112222222211111 11123
Q ss_pred HHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 880 CLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 880 ~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
|...+.+ ||..||+.+|++|||++.+...++++...
T Consensus 429 CP~~vY~-lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 429 CPDEVYE-LMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred CCHHHHH-HHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 5556666 99999999999999999999988887654
No 11
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.6e-38 Score=323.88 Aligned_cols=226 Identities=23% Similarity=0.219 Sum_probs=170.9
Q ss_pred CCCCCceeecccCceeEEeccccC-----------------------cHHHHHHHHHHHHccCCccccceeeecccCCCC
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSK 717 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 717 (929)
+.|...+.+|+|+||.|-+|..+. ......+|+++|++++|||||++++++...+
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d-- 249 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD-- 249 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC--
Confidence 467778999999999997765441 1123469999999999999999999996544
Q ss_pred CcceEEEEEEecCCCCcccccccc--------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC---CceEEecc
Q 002376 718 NMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE---MTAKVGDF 786 (929)
Q Consensus 718 ~~~~~~lV~e~~~~gsL~~~l~~~--------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~---~~~ki~Df 786 (929)
+.|||||||+||+|.+++-.. +.+..|++.|+.|||++ ||+||||||+|||+..+ ..+||+||
T Consensus 250 ---s~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 250 ---SSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred ---ceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEeccc
Confidence 379999999999999987532 23478999999999998 99999999999999755 78999999
Q ss_pred ccccccccccCCCCCccccceeccccccccccccCCCC---CCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhccCh
Q 002376 787 GLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER---PSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQVLDP 861 (929)
Q Consensus 787 Gla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~~~~ 861 (929)
|+|+... ....+..+|||+.|.|||++.++. +..++|+||+||++|-+..+..++..... ...+.+
T Consensus 324 GlAK~~g-------~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI-- 394 (475)
T KOG0615|consen 324 GLAKVSG-------EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQI-- 394 (475)
T ss_pred chhhccc-------cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHH--
Confidence 9999763 234456789999999999998775 34578999999998887666555543221 122111
Q ss_pred HHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 862 ELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 862 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..+.+ ...+..+..+.+-..+++.+++..||++|||++|+++
T Consensus 395 -~~G~y----~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 395 -LKGRY----AFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred -hcCcc----cccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 11111 1222333444444445888999999999999999985
No 12
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.2e-38 Score=355.95 Aligned_cols=237 Identities=24% Similarity=0.392 Sum_probs=182.4
Q ss_pred CCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 662 NFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
+....+.||+|+||+||+|+.. +..++|.+|+++++.++|||||+++|+|...++
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P--- 563 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP--- 563 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe---
Confidence 4455688999999999998765 135789999999999999999999999987665
Q ss_pred ceEEEEEEecCCCCcccccccc----------------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC
Q 002376 720 EFLALVYEFLSNGSLGDWIHGE----------------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE 777 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~----------------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~ 777 (929)
.+||+|||..|||.+||+.+ ..++.|||.||+||-++ .+|||||.++|+||.+
T Consensus 564 --~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge 638 (774)
T KOG1026|consen 564 --LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGE 638 (774)
T ss_pred --eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceecc
Confidence 89999999999999999721 12467999999999998 7999999999999999
Q ss_pred CCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhh
Q 002376 778 EMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQ 857 (929)
Q Consensus 778 ~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~ 857 (929)
+..|||+|||++|.+...+- ........-..+|||||.+..++||+++||||+|+++||+..+ +..| ..+
T Consensus 639 ~l~VKIsDfGLsRdiYssDY----Yk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsy----G~QP--y~g 708 (774)
T KOG1026|consen 639 NLVVKISDFGLSRDIYSSDY----YKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSY----GKQP--YYG 708 (774)
T ss_pred ceEEEecccccchhhhhhhh----hcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhcc----ccCc--ccc
Confidence 99999999999996532110 0011122346799999999999999999999999999985322 2112 222
Q ss_pred ccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 858 VLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 858 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
.-+.++.+......- -.....|..++.+ ||..||+.+|++||+++||-.+|+...+..+
T Consensus 709 lSn~EVIe~i~~g~l-L~~Pe~CP~~vY~-LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 709 LSNQEVIECIRAGQL-LSCPENCPTEVYS-LMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred cchHHHHHHHHcCCc-ccCCCCCCHHHHH-HHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 223333332222211 1122256677777 9999999999999999999999999877644
No 13
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-39 Score=319.44 Aligned_cols=230 Identities=24% Similarity=0.322 Sum_probs=170.0
Q ss_pred CCCCceeecccCceeEEecccc------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERT------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+|.+.++||+|.||+|||+.+. +..++...|+.+|++++|||||++++.-.. +..+.++
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~---~~~evln 96 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFI---EDNEVLN 96 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhh---ccchhhH
Confidence 4666789999999999998765 234567799999999999999999985433 2334589
Q ss_pred EEEEecCCCCcccccccc----c--------cccccHHHHHHHhhhCCCCC--EEecCCCCCCeeecCCCceEEeccccc
Q 002376 724 LVYEFLSNGSLGDWIHGE----R--------KNELDITSALDYLHNDCEVP--VVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~----~--------~~~~~ia~aL~yLH~~~~~~--iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
+|||||+.|+|..+++.. + ++..|+++||.++|... +. |+||||||.||+++.+|.+|++|||++
T Consensus 97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLG 175 (375)
T ss_pred HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhH
Confidence 999999999999988622 1 23579999999999942 24 999999999999999999999999999
Q ss_pred cccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcc
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTS 869 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 869 (929)
|.+.. ........+|||.||+||.+.+.+|+.|+||||+||++|||....-++..- ...+ +...+..
T Consensus 176 r~l~s------~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--n~~~-----L~~KI~q 242 (375)
T KOG0591|consen 176 RFLSS------KTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--NLLS-----LCKKIEQ 242 (375)
T ss_pred hHhcc------hhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--cHHH-----HHHHHHc
Confidence 98742 233456679999999999999999999999999999988875544333211 1111 1111111
Q ss_pred cchhhhhhh-HHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 002376 870 NESQTIQLH-DCLITIIGSVGLSCTTESPGGRIGIREALRRL 910 (929)
Q Consensus 870 ~~~~~~~~~-~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L 910 (929)
..- ++.+ +..++-+..|+..|++.||+.||+....++.+
T Consensus 243 gd~--~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 243 GDY--PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred CCC--CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 111 0111 23344444577799999999999854444333
No 14
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-38 Score=325.68 Aligned_cols=175 Identities=30% Similarity=0.471 Sum_probs=149.2
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.++|...+.||+|+||+||+|+++. ..+....|+.+|+.++|||||++++++... .+
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~-----~~ 83 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDD-----DF 83 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC-----Ce
Confidence 4678888899999999999998872 234567899999999999999999999554 45
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC------CceEEeccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE------MTAKVGDFG 787 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~------~~~ki~DfG 787 (929)
+|+|||||.+|||.+|++.++ .+..|+|.||++||++ +||||||||.||||+.. -.+||+|||
T Consensus 84 i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFG 160 (429)
T KOG0595|consen 84 IYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFG 160 (429)
T ss_pred EEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccc
Confidence 999999999999999998553 4478999999999998 99999999999999764 468999999
Q ss_pred cccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhh
Q 002376 788 LARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVES 849 (929)
Q Consensus 788 la~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~ 849 (929)
+||.+.+. ......+|++.|||||+++...|+.|+|+||.|+++|++..+.-++.
T Consensus 161 fAR~L~~~-------~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~ 215 (429)
T KOG0595|consen 161 FARFLQPG-------SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFD 215 (429)
T ss_pred hhhhCCch-------hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcc
Confidence 99987522 23455799999999999999999999999999988888766555443
No 15
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-37 Score=337.51 Aligned_cols=224 Identities=22% Similarity=0.287 Sum_probs=177.5
Q ss_pred CCCCCceeecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
..|...+.||+|||+.||+++.. +..+...+||++.+.++|||||+++++|.+ ..+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FED-----s~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFED-----SNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeec-----CCc
Confidence 57999999999999999998873 345678899999999999999999999944 455
Q ss_pred EEEEEEecCCCCcccccccc--------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGE--------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~--------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
+|+|.|+|++|+|..+++.+ |.+..||+.||.|||+. +|||||||-.|+++++++++||+|||+|..+.
T Consensus 93 VYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le 169 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLE 169 (592)
T ss_pred eEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeec
Confidence 99999999999999998732 34578999999999998 99999999999999999999999999999874
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
.. .......+|||-|+|||++....++..+||||.||++|.+.++.-++..- .+.+.. ..-...
T Consensus 170 ~~------~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk--~vkety--------~~Ik~~ 233 (592)
T KOG0575|consen 170 YD------GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK--TVKETY--------NKIKLN 233 (592)
T ss_pred Cc------ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc--hHHHHH--------HHHHhc
Confidence 32 12345679999999999999999999999999999888765544333221 121111 111111
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
....+..++.-.++|+.+.+++||.+|||+++|+.
T Consensus 234 ~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 234 EYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred CcccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 12222234444455888999999999999999974
No 16
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-37 Score=330.89 Aligned_cols=247 Identities=24% Similarity=0.305 Sum_probs=187.4
Q ss_pred HHHHHhhCCCCCceeecccCceeEEeccccCc---------------HHHHHHHHHHHHccCCccccceeeecccCCCCC
Q 002376 654 DELRRATGNFSHENLIGSGSFGSVLHNERTGS---------------WKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 654 ~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~---------------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 718 (929)
++++...+.+.....||+|+||+||+|++.++ .+.|++|+.++++-+|.||+-+.|||..+.
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~--- 461 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHGDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP--- 461 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccccceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc---
Confidence 45555555666778999999999999999843 578999999999999999999999996433
Q ss_pred cceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
..+|+.+|+|-+|+.++|..+ .++.|||+||.|||.+ +|||||+|+.||++.++++|||+|||++
T Consensus 462 ---~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 462 ---LAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLA 535 (678)
T ss_pred ---eeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccce
Confidence 499999999999999998433 4588999999999998 9999999999999999999999999999
Q ss_pred cccccccCCCCCccccceeccccccccccccCCC---CCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHh
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE---RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQL 866 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 866 (929)
..-..... ......-.|...|||||+++.. +|++.+|||+||+++||+...+|++. .... .+++=.--++.
T Consensus 536 tvk~~w~g----~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~-dqIifmVGrG~ 609 (678)
T KOG0193|consen 536 TVKTRWSG----EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNR-DQIIFMVGRGY 609 (678)
T ss_pred eeeeeecc----ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCCh-hheEEEecccc
Confidence 75432211 1112233578899999998743 69999999999999999998888877 2211 11110001111
Q ss_pred hcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 867 MTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
+..+. ......|..++ ++|+..||..+|++||.+.+++.+|+++....+
T Consensus 610 l~pd~--s~~~s~~pk~m-k~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~p 658 (678)
T KOG0193|consen 610 LMPDL--SKIRSNCPKAM-KRLLSDCWKFDREERPLFPQLLSKLEELLPSLP 658 (678)
T ss_pred cCccc--hhhhccCHHHH-HHHHHHHHhcCcccCccHHHHHHHHHHhhhccc
Confidence 11110 11112233333 337779999999999999999999999888654
No 17
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-38 Score=356.84 Aligned_cols=465 Identities=28% Similarity=0.384 Sum_probs=284.7
Q ss_pred EEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccc
Q 002376 73 VIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMA 152 (929)
Q Consensus 73 v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 152 (929)
++.|++..|-+-...-+.+..--+|+.|||++|++. ..|..+..+.+|+.|+++.|.|. ..|.+.+++.+|++|.|.+
T Consensus 23 ~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~ 100 (1081)
T KOG0618|consen 23 LQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKN 100 (1081)
T ss_pred HHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheecc
Confidence 455555555433111111222233777777777765 66667777777777777777776 5666667777777777777
Q ss_pred cccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEee
Q 002376 153 NKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLA 232 (929)
Q Consensus 153 N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 232 (929)
|++. ..|.+ +..+.+|++|++|.|++. . +|.-+..++.+..++.++|......+ .+. ++.++|.
T Consensus 101 n~l~-~lP~~-~~~lknl~~LdlS~N~f~-~--------~Pl~i~~lt~~~~~~~s~N~~~~~lg----~~~-ik~~~l~ 164 (1081)
T KOG0618|consen 101 NRLQ-SLPAS-ISELKNLQYLDLSFNHFG-P--------IPLVIEVLTAEEELAASNNEKIQRLG----QTS-IKKLDLR 164 (1081)
T ss_pred chhh-cCchh-HHhhhcccccccchhccC-C--------CchhHHhhhHHHHHhhhcchhhhhhc----ccc-chhhhhh
Confidence 7765 45554 677777777777777652 2 33344456666666666662211121 111 6667777
Q ss_pred ecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCC
Q 002376 233 SNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSS 312 (929)
Q Consensus 233 ~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~ 312 (929)
.|.+.+.++.++.. +.+ .++|++|++. -..+.++.+|+.|....|+++... -..++|+.|+.++|.+...
T Consensus 165 ~n~l~~~~~~~i~~-l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~ 234 (1081)
T KOG0618|consen 165 LNVLGGSFLIDIYN-LTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSELE----ISGPSLTALYADHNPLTTL 234 (1081)
T ss_pred hhhcccchhcchhh-hhe--eeecccchhh---hhhhhhccchhhhhhhhcccceEE----ecCcchheeeeccCcceee
Confidence 77776666655443 332 4677777665 234556667777777777766332 2345677777777777633
Q ss_pred CCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcc
Q 002376 313 GDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGE 392 (929)
Q Consensus 313 ~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 392 (929)
.. -..-.+|+++++++|+++ .+|++++.+. +|+.++..+|+|+ .+|..+....+|+.|+..+|.++ -
T Consensus 235 ~~---------~p~p~nl~~~dis~n~l~-~lp~wi~~~~-nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-y 301 (1081)
T KOG0618|consen 235 DV---------HPVPLNLQYLDISHNNLS-NLPEWIGACA-NLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-Y 301 (1081)
T ss_pred cc---------ccccccceeeecchhhhh-cchHHHHhcc-cceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-h
Confidence 21 122357788888888887 5667777777 6888888888884 56777777778888888888887 5
Q ss_pred cCccccCCCCCCEEEecCCcCCCCCcccccCCCC-CceecccCcccccccCcccccccccceecccCCcCCCCCCCCccc
Q 002376 393 IPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKK-LNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILR 471 (929)
Q Consensus 393 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~ 471 (929)
+|....++++|++|+|..|+|...++..|.-+.. |..|+.+.|++.......=..+..|+.|++.+|.++...
T Consensus 302 ip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c------ 375 (1081)
T KOG0618|consen 302 IPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSC------ 375 (1081)
T ss_pred CCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccc------
Confidence 5666777888888888888887544433333332 555666666665322111123455666666666666432
Q ss_pred CCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCccccc
Q 002376 472 PLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQN 551 (929)
Q Consensus 472 ~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 551 (929)
-.-+.+...|+.|+|++|+|.......+.++..|++|+||+|+++ .+|..+..++.|++|..-+|+|. ..| .+..
T Consensus 376 --~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~ 450 (1081)
T KOG0618|consen 376 --FPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQ 450 (1081)
T ss_pred --hhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhh
Confidence 123455566777777777766444445666667777777777776 45566666777777777777766 455 5666
Q ss_pred CCCCCeEeCCCCcCcccCCCC-CCCCCCCcccccCCCCC
Q 002376 552 LQALRSLNLTFNNLEGVVPSE-GIFRNMSNVHLKGNPKL 589 (929)
Q Consensus 552 l~~L~~L~Ls~N~l~~~~p~~-~~~~~l~~l~l~~N~~~ 589 (929)
++.|+.+|+|.|+|+-..-.. ...++|+.++++||+++
T Consensus 451 l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 451 LPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred cCcceEEecccchhhhhhhhhhCCCcccceeeccCCccc
Confidence 677777777777766443222 22266677777777643
No 18
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-36 Score=333.75 Aligned_cols=236 Identities=22% Similarity=0.311 Sum_probs=181.4
Q ss_pred CCCceeecccCceeEEecccc--------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 663 FSHENLIGSGSFGSVLHNERT--------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~--------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
.+++++||.|.||+||+|+.+ +.+.+|..|+.+|.+++||||++|.|+.....+ +
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~P-----v 705 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKP-----V 705 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCce-----e
Confidence 346689999999999999876 346789999999999999999999999865443 8
Q ss_pred EEEEEecCCCCccccccccccc---------cccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGERKN---------ELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~~~---------~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
++|.|||++|+|+.||++.-.. ..+||.||.||-+. ++|||||.++|||++.+..+||+|||++|.+.
T Consensus 706 MIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvle 782 (996)
T KOG0196|consen 706 MIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 782 (996)
T ss_pred EEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecc
Confidence 9999999999999999854321 45799999999987 99999999999999999999999999999875
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
++. .....+..-.-..+|.|||.+..++++.++||||+|+++||+.. ++..|- .++-.+++...+..+- .
T Consensus 783 dd~---~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmS----yGERPY--WdmSNQdVIkaIe~gy-R 852 (996)
T KOG0196|consen 783 DDP---EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS----YGERPY--WDMSNQDVIKAIEQGY-R 852 (996)
T ss_pred cCC---CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecc----cCCCcc--cccchHHHHHHHHhcc-C
Confidence 331 11122222233578999999999999999999999999888432 222221 1222222222111111 1
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
-++..+|...+.+ ||..||+.|-.+||++.+++..|+++.+.-
T Consensus 853 LPpPmDCP~aL~q-LMldCWqkdR~~RP~F~qiV~~lDklIrnP 895 (996)
T KOG0196|consen 853 LPPPMDCPAALYQ-LMLDCWQKDRNRRPKFAQIVSTLDKLIRNP 895 (996)
T ss_pred CCCCCCCcHHHHH-HHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence 1223367677777 999999999999999999999999988763
No 19
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=324.78 Aligned_cols=267 Identities=21% Similarity=0.327 Sum_probs=194.8
Q ss_pred HHHHHHHHHHhhhhhhhhccccccccccccccccCCCCChHHHHHhhCCCCCceeecccCceeEEeccccCcH------H
Q 002376 614 IMAVIAGCFLIVWPIIVRKRKAKRVGVSALFKVCHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTGSW------K 687 (929)
Q Consensus 614 ~~~~l~~~~~~~~~~~~rrr~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~------~ 687 (929)
..-.++.|+..+|.++........+... ...=.+.|++|.+ .+.+|+|+.|.||.|+..... +
T Consensus 88 ~~~GLfgC~rPV~~~iGk~~s~e~k~qq----~e~WeiPFe~IsE-------LeWlGSGaQGAVF~Grl~netVAVKKV~ 156 (904)
T KOG4721|consen 88 FLEGLFGCLRPVWTMIGKAYSTEHKQQQ----EELWEIPFEEISE-------LEWLGSGAQGAVFLGRLHNETVAVKKVR 156 (904)
T ss_pred HHHHHHhhhHHHHHHhccceeeehhhhh----hhhccCCHHHhhh-------hhhhccCcccceeeeeccCceehhHHHh
Confidence 3445667777777665432211100000 0111345666543 578999999999999987432 2
Q ss_pred H-HHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEecCCCCccccccccccc--------cccHHHHHHHhhhC
Q 002376 688 S-FIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKN--------ELDITSALDYLHND 758 (929)
Q Consensus 688 ~-~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~--------~~~ia~aL~yLH~~ 758 (929)
+ -..+|+.|++++||||+.+.|+|.. ...+|||||||+.|.|+.+|+..+.+ ..+||.||.|||.+
T Consensus 157 elkETdIKHLRkLkH~NII~FkGVCtq-----sPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~h 231 (904)
T KOG4721|consen 157 ELKETDIKHLRKLKHPNIITFKGVCTQ-----SPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLH 231 (904)
T ss_pred hhhhhhHHHHHhccCcceeeEeeeecC-----CceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHh
Confidence 2 2358889999999999999999954 44689999999999999999977655 46899999999998
Q ss_pred CCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCC
Q 002376 759 CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFA 838 (929)
Q Consensus 759 ~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~ 838 (929)
.|||||||+-||||..+..+||+|||.++.+.+ ....+.++||..|||||+++..++++|+||||||+++
T Consensus 232 ---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~-------~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVL 301 (904)
T KOG4721|consen 232 ---KIIHRDLKSPNILISYDDVVKISDFGTSKELSD-------KSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVL 301 (904)
T ss_pred ---hHhhhccCCCceEeeccceEEeccccchHhhhh-------hhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHH
Confidence 899999999999999999999999999987632 2345678999999999999999999999999999998
Q ss_pred CCcchhHHhhhcCCc-hh-hhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 839 GEFNIVKWVESNLPE-NV-LQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 839 ~~~~~~~~~~~~~~~-~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
||+.+.+.++..+.. .+ ..+-...+.-.++. ..++.+.- |+.+||+..|..||++++++..|+-..+.
T Consensus 302 WEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPs------tcP~Gfkl----L~Kqcw~sKpRNRPSFrqil~HldIa~pe 371 (904)
T KOG4721|consen 302 WEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPS------TCPDGFKL----LLKQCWNSKPRNRPSFRQILLHLDIASPE 371 (904)
T ss_pred HHHHhcCCCccccchheeEEeccCCcccccCcc------cCchHHHH----HHHHHHhcCCCCCccHHHHHHHHhhcCHH
Confidence 888877776655543 11 11111112111111 11122222 66699999999999999999888765443
No 20
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=2e-37 Score=333.30 Aligned_cols=370 Identities=26% Similarity=0.452 Sum_probs=236.5
Q ss_pred CCCCCCCEEEeecCCCC-CCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhccCCCC
Q 002376 92 GNLSFLRSIQLQNNKLS-GNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSL 170 (929)
Q Consensus 92 ~~L~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L 170 (929)
+-|+..+-.|+++|.++ +..|.....+++++.|.|...++. .+|+.++.+.+|++|.+++|++. .+-.+ +..|+.|
T Consensus 4 gVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGE-Ls~Lp~L 80 (1255)
T KOG0444|consen 4 GVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGE-LSDLPRL 80 (1255)
T ss_pred cccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhh-hccchhh
Confidence 33555666666666666 345666666666666666666665 56666666666666666666665 23222 4445555
Q ss_pred cEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCC
Q 002376 171 QVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPN 250 (929)
Q Consensus 171 ~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~ 250 (929)
+.+++..|++.. +-+|..++.+..|+.||||+|++. +.|.++-. -.+
T Consensus 81 Rsv~~R~N~LKn-------------------------------sGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~-AKn 127 (1255)
T KOG0444|consen 81 RSVIVRDNNLKN-------------------------------SGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEY-AKN 127 (1255)
T ss_pred HHHhhhcccccc-------------------------------CCCCchhcccccceeeecchhhhh-hcchhhhh-hcC
Confidence 555555554421 123444555555555555555554 44544433 344
Q ss_pred cceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCC
Q 002376 251 LLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHL 330 (929)
Q Consensus 251 L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L 330 (929)
+.+|+|++|++..+....|-+++.|-.||||+|++. .+|+....|..|++|.|++|.+.... +..+..+++|
T Consensus 128 ~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQ-------LrQLPsmtsL 199 (1255)
T KOG0444|consen 128 SIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQ-------LRQLPSMTSL 199 (1255)
T ss_pred cEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHH-------HhcCccchhh
Confidence 555555555555433344557777777888888877 66767777777777777777664321 1233344555
Q ss_pred CEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecC
Q 002376 331 NYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAG 410 (929)
Q Consensus 331 ~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 410 (929)
++|++++.+=+ ...+|.++..+.+|..+|||.|.+. .+|..+..+++|+.|+||+
T Consensus 200 ~vLhms~TqRT------------------------l~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~ 254 (1255)
T KOG0444|consen 200 SVLHMSNTQRT------------------------LDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSG 254 (1255)
T ss_pred hhhhcccccch------------------------hhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCc
Confidence 55555554432 1235566666666666666666665 5666666666666666666
Q ss_pred CcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecC
Q 002376 411 NEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSD 490 (929)
Q Consensus 411 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~ 490 (929)
|+|+ .+........+|+.|+||.|+++ .+|.++..++.|+.|++.+|+++ +..+|+.|+.|.+|+.+..++
T Consensus 255 N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~-------FeGiPSGIGKL~~Levf~aan 325 (1255)
T KOG0444|consen 255 NKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLT-------FEGIPSGIGKLIQLEVFHAAN 325 (1255)
T ss_pred Ccee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCccc-------ccCCccchhhhhhhHHHHhhc
Confidence 6665 33444455567777777777777 57777777777888888777775 345677888888888888888
Q ss_pred CCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcC
Q 002376 491 NSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKL 541 (929)
Q Consensus 491 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 541 (929)
|.+. ..|+.+..|..|+.|.|++|++- ..|+++--++.|+.|||..|.=
T Consensus 326 N~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 326 NKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPN 374 (1255)
T ss_pred cccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcC
Confidence 8876 77888888888888888888886 5788888888888888888843
No 21
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-36 Score=314.11 Aligned_cols=233 Identities=24% Similarity=0.314 Sum_probs=176.9
Q ss_pred hCCCCCceeecccCceeEEecccc-----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT-----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~-----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
.+.|+..++||.|..+.||+|+.. .+.+...+|+..|+.++||||++++..|..... +
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~-----L 99 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSE-----L 99 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecce-----e
Confidence 457899999999999999998875 234678899999999999999999999876443 8
Q ss_pred EEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
|+||.||.+|++.+.++..- .+..++++||.|||++ |.||||||+.||||+++|.+||+|||.+..+
T Consensus 100 WvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l 176 (516)
T KOG0582|consen 100 WVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASL 176 (516)
T ss_pred EEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeee
Confidence 99999999999999987322 2356899999999999 9999999999999999999999999988776
Q ss_pred ccccCCCCCccccceeccccccccccccCCC--CCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhc--
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGE--RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMT-- 868 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-- 868 (929)
..... +.... ...++||+.|||||+++.. .|+.|+||||||+.+.|+..+..++..+|. .+++-..+....+
T Consensus 177 ~~~G~-R~~~r-f~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP--mkvLl~tLqn~pp~~ 252 (516)
T KOG0582|consen 177 FDSGD-RQVTR-FNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPP--MKVLLLTLQNDPPTL 252 (516)
T ss_pred cccCc-eeeEe-eccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCCh--HHHHHHHhcCCCCCc
Confidence 54321 11111 1667999999999995443 599999999999999888888888887775 1111111111100
Q ss_pred ----ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 869 ----SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 869 ----~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.+..+... ..+-+++++..|++.||++|||++++++
T Consensus 253 ~t~~~~~d~~k~----~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 253 LTSGLDKDEDKK----FSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred ccccCChHHhhh----hcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 00111111 1122333666999999999999999874
No 22
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-35 Score=310.76 Aligned_cols=233 Identities=28% Similarity=0.347 Sum_probs=173.0
Q ss_pred CCCCCceeecccCceeEEeccccC------------c----HHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG------------S----WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~------------~----~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
.++...+.||+|+||.||.+.... . .+.+.+|+++|++++|||||+.+|.....+. ..+++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~---~~~~i 93 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSREN---DEYNI 93 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccC---eeeEe
Confidence 356677899999999999987752 1 3447899999999999999999998544332 35899
Q ss_pred EEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC-CCceEEecccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE-EMTAKVGDFGLARFLLE 794 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~-~~~~ki~DfGla~~~~~ 794 (929)
.|||+++|+|.+++.... .+..||++||+|||++ +||||||||+|||++. ++.+||+|||+++....
T Consensus 94 ~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred eeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 999999999999987543 3367999999999998 9999999999999999 79999999999987642
Q ss_pred ccCCCCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
..........+.||+.|||||++..+. ...++||||+||+..||.+..-+|..+-+. ...+....... .
T Consensus 171 ---~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~-----~~~~~~ig~~~--~ 240 (313)
T KOG0198|consen 171 ---KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEE-----AEALLLIGRED--S 240 (313)
T ss_pred ---ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcch-----HHHHHHHhccC--C
Confidence 011112234578999999999998643 345999999999999887765454442110 11111111111 1
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
.+..++.++...++++.+|+..||++||||+|+++.
T Consensus 241 ~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 241 LPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred CCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 112233344455567779999999999999999865
No 23
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=3.1e-37 Score=331.78 Aligned_cols=330 Identities=27% Similarity=0.464 Sum_probs=258.1
Q ss_pred CCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCccccc
Q 002376 193 PSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNL 272 (929)
Q Consensus 193 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l 272 (929)
|+.++.+.+|++|.+++|++. .+-+.+..++.|+.+++..|++.. .-+|..+..+
T Consensus 48 PeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKn------------------------sGiP~diF~l 102 (1255)
T KOG0444|consen 48 PEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKN------------------------SGIPTDIFRL 102 (1255)
T ss_pred hHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhcccccc------------------------CCCCchhccc
Confidence 334445555555555555555 344556677778888888887752 2356666677
Q ss_pred ccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhcc
Q 002376 273 TNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFS 352 (929)
Q Consensus 273 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 352 (929)
..|++||||+|++. ..|..+...+++-.|+|++|+|.+++. .-|.+++.|-+||||+|++. .+|..+..+.
T Consensus 103 ~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn-------~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~ 173 (1255)
T KOG0444|consen 103 KDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPN-------SLFINLTDLLFLDLSNNRLE-MLPPQIRRLS 173 (1255)
T ss_pred ccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCc-------hHHHhhHhHhhhccccchhh-hcCHHHHHHh
Confidence 78888888888887 677778888888888888888877765 35678888889999999998 7788888887
Q ss_pred ccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCC-cccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceec
Q 002376 353 NELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSIS-GEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQID 431 (929)
Q Consensus 353 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 431 (929)
.|++|+|++|.+...--..+-.+++|++|.+|+.+-+ ..+|.++..+.+|..+|+|.|.++ .+|+.+.++.+|+.|+
T Consensus 174 -~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLN 251 (1255)
T KOG0444|consen 174 -MLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLN 251 (1255)
T ss_pred -hhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheec
Confidence 7999999999876544445566788888999886643 467888888999999999999987 7888999999999999
Q ss_pred ccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCC-CCCCcchhcCcCccee
Q 002376 432 LSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLS-GNLPNSLKNCKSLEEL 510 (929)
Q Consensus 432 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~-~~~p~~~~~l~~L~~L 510 (929)
||+|+|+ .+....+.+.+|++|+||.|+++ .+|+.+..|+.|+.|++.+|+++ .-+|+.++.+.+|+.+
T Consensus 252 LS~N~it-eL~~~~~~W~~lEtLNlSrNQLt---------~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf 321 (1255)
T KOG0444|consen 252 LSGNKIT-ELNMTEGEWENLETLNLSRNQLT---------VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVF 321 (1255)
T ss_pred cCcCcee-eeeccHHHHhhhhhhccccchhc---------cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHH
Confidence 9999988 56666777888999999999886 34888888889999999888876 2478888888889999
Q ss_pred ecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCC
Q 002376 511 LMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVP 570 (929)
Q Consensus 511 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 570 (929)
..++|.+. ..|..++.+..|+.|.|+.|+|- ++|+.+.-|+.|+.|||..|.=--.+|
T Consensus 322 ~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 322 HAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPP 379 (1255)
T ss_pred Hhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCC
Confidence 98888887 78888888888999999999887 688888888888888888886444444
No 24
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-36 Score=308.91 Aligned_cols=219 Identities=30% Similarity=0.345 Sum_probs=166.2
Q ss_pred hCCCCCceeecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.++|+..++||+|+||+||.++.+ +..+...+|..+|.+++||+||+++..|. +.+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQ-----t~~ 98 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQ-----TEE 98 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecc-----cCC
Confidence 468899999999999999987765 23456778999999999999999998884 445
Q ss_pred eEEEEEEecCCCCccccccccccc--------cccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGERKN--------ELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~~~--------~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.+|+|+||+.||.|..+|.+.+.+ +.+|+.||.|||+. +|||||+||+|||+|++|.++++|||+++..
T Consensus 99 kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 99 KLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKED 175 (357)
T ss_pred eEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence 699999999999999999855433 56799999999998 9999999999999999999999999999854
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
-. ....+..++||+.|||||++.+..|+..+|-||+|+++|+|....-++... ...++++..+.+.....
T Consensus 176 ~~------~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~--~~~~~~~~I~~~k~~~~-- 245 (357)
T KOG0598|consen 176 LK------DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE--DVKKMYDKILKGKLPLP-- 245 (357)
T ss_pred cc------CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc--cHHHHHHHHhcCcCCCC--
Confidence 21 122344589999999999999999999999999998877764433222111 12223333222211111
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCC
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRI 901 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP 901 (929)
+..+..-.++++.+.+..||++|-
T Consensus 246 -----p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 246 -----PGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred -----CccCCHHHHHHHHHHhccCHHHhc
Confidence 111222233466699999999995
No 25
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=326.74 Aligned_cols=239 Identities=21% Similarity=0.296 Sum_probs=179.7
Q ss_pred HHhhCCCCCceeecccCceeEEecccc-----------------------CcHHHHHHHHHHHHccCCccccceeeeccc
Q 002376 657 RRATGNFSHENLIGSGSFGSVLHNERT-----------------------GSWKSFIAECETLRNVRHRNLVKLITSCSS 713 (929)
Q Consensus 657 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~-----------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~ 713 (929)
+-..++....++||+|+||+||+|+.. ...++|++|+++|+.++|||||+++|++..
T Consensus 153 el~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~ 232 (474)
T KOG0194|consen 153 ELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL 232 (474)
T ss_pred EEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC
Confidence 333445556689999999999998764 124579999999999999999999999987
Q ss_pred CCCCCcceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEe
Q 002376 714 LDSKNMEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVG 784 (929)
Q Consensus 714 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~ 784 (929)
..+ +++|||+|+||+|.++|++.. .++.++|+||+|||+. ++|||||.++|+|++.++.+||+
T Consensus 233 ~~P-----l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKIS 304 (474)
T KOG0194|consen 233 EEP-----LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKIS 304 (474)
T ss_pred CCc-----cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeC
Confidence 665 899999999999999998654 2367899999999998 99999999999999999999999
Q ss_pred ccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHH
Q 002376 785 DFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPEL 863 (929)
Q Consensus 785 DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l 863 (929)
|||+++.-..... ......-...|+|||.+..+.|+.++||||||+.+||+.... ...++. ...++ ...+
T Consensus 305 DFGLs~~~~~~~~------~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g--~~Py~g~~~~~v-~~kI 375 (474)
T KOG0194|consen 305 DFGLSRAGSQYVM------KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENG--AEPYPGMKNYEV-KAKI 375 (474)
T ss_pred ccccccCCcceee------ccccccCcceecChhhhccCccccccchhheeeeEEeeeccC--CCCCCCCCHHHH-HHHH
Confidence 9999985421110 010113467899999999999999999999999999954311 112322 11111 1111
Q ss_pred -HHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 864 -RQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 864 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
...+ +...+...++.++.++.+||..+|++||+|.++.+.++.+.....
T Consensus 376 ~~~~~------r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 376 VKNGY------RMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred HhcCc------cCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 1111 111222334444457779999999999999999999999887755
No 26
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=7.7e-36 Score=297.49 Aligned_cols=233 Identities=21% Similarity=0.332 Sum_probs=168.4
Q ss_pred CCCCCceeecccCceeEEeccccCc------------------HHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTGS------------------WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~~------------------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
+.|+...++|+|+||+|||++.+.+ .+-.++|+++|++++|||+|.++++|. ....+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFr-----rkrkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFR-----RKRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHH-----hccee
Confidence 3567778999999999999988721 234669999999999999999999994 44558
Q ss_pred EEEEEecCCCCcccccc--------ccccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~--------~~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
++|+|||+..-|.+.=+ ..+.+..|++.|+.|+|++ ++|||||||+||||+.+|.+|+||||+||.+..
T Consensus 77 hLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~ 153 (396)
T KOG0593|consen 77 HLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSA 153 (396)
T ss_pred EEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcC
Confidence 99999998754444322 1235578999999999998 999999999999999999999999999998752
Q ss_pred ccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hh---hhc---cChHHHH
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NV---LQV---LDPELRQ 865 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~---~~~---~~~~l~~ 865 (929)
.....+..+.|.+|+|||.+.| ..|+..+|||+.||+..|+..++-.|..-.+ .+ ... +-++...
T Consensus 154 ------pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~ 227 (396)
T KOG0593|consen 154 ------PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQS 227 (396)
T ss_pred ------CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHH
Confidence 1223456688999999999998 5799999999999987776555443332222 10 000 0111111
Q ss_pred hhcc----------cchhhhhhh---HHHHHHHHHHhccccCCCCCCCCCHHHHH
Q 002376 866 LMTS----------NESQTIQLH---DCLITIIGSVGLSCTTESPGGRIGIREAL 907 (929)
Q Consensus 866 ~~~~----------~~~~~~~~~---~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~ 907 (929)
.+.. +.+...... ..+..++-+++..|++.||++|++-+|++
T Consensus 228 iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll 282 (396)
T KOG0593|consen 228 IFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLL 282 (396)
T ss_pred HhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHh
Confidence 1111 000000000 12233555588999999999999999886
No 27
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-35 Score=346.00 Aligned_cols=239 Identities=23% Similarity=0.341 Sum_probs=182.9
Q ss_pred CCCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCC
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 718 (929)
+..+..+.||+|+||.||+|... +...+|.+|..+|++++|||||+++|+|.+...
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~-- 769 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP-- 769 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC--
Confidence 34456789999999999998764 235689999999999999999999999987443
Q ss_pred cceEEEEEEecCCCCccccccccc---------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEE
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER---------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKV 783 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki 783 (929)
.++++|||++|+|..||++.| .++.|||+|+.||++. .+|||||.++|+|+++...|||
T Consensus 770 ---~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKI 843 (1025)
T KOG1095|consen 770 ---PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKI 843 (1025)
T ss_pred ---cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEE
Confidence 699999999999999998663 2367999999999998 8999999999999999999999
Q ss_pred eccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChH
Q 002376 784 GDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPE 862 (929)
Q Consensus 784 ~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 862 (929)
+|||+||.+....--... ....-...|||||.++.+.+++|+||||||+++||+.. .-...|++ .-.+++..-
T Consensus 844 aDFGlArDiy~~~yyr~~----~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifs--lG~~PY~~~~n~~v~~~~ 917 (1025)
T KOG1095|consen 844 ADFGLARDIYDKDYYRKH----GEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFS--LGATPYPSRSNFEVLLDV 917 (1025)
T ss_pred cccchhHhhhhchheecc----CccccceecCCHHHHhhcccccccchhhhHHHHHHHHh--CCCCCCCCcchHHHHHHH
Confidence 999999955322111111 11123468999999999999999999999998888422 22223333 222222222
Q ss_pred HHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhhc
Q 002376 863 LRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLKQ 920 (929)
Q Consensus 863 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~ 920 (929)
+.+ . .-.+...|..++++ +|..||+.+|++||++++++++++.+.......
T Consensus 918 ~~g-----g-RL~~P~~CP~~ly~-lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~ 968 (1025)
T KOG1095|consen 918 LEG-----G-RLDPPSYCPEKLYQ-LMLQCWKHDPEDRPSFRTIVEQDPAISNAALGT 968 (1025)
T ss_pred HhC-----C-ccCCCCCCChHHHH-HHHHHccCChhhCccHHHHHhhhhhhhhhhccC
Confidence 221 1 11122346666775 999999999999999999999999998876544
No 28
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-36 Score=316.12 Aligned_cols=234 Identities=24% Similarity=0.328 Sum_probs=170.6
Q ss_pred hCCCCCceeecccCceeEEeccccCc---------------HHHH--HHHHHHHHccC-CccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTGS---------------WKSF--IAECETLRNVR-HRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~~---------------~~~~--~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.++|...++||.|+||.||+|+.... .++. .||++.|++++ |||||++.+++.+.+. .
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~----~ 84 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDR----I 84 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCc----e
Confidence 35778889999999999999987622 1222 37999999998 9999999999976442 5
Q ss_pred EEEEEEecCCCCcccccccccc---------ccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGERK---------NELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~~---------~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
+|+|||||+ .+|++.++++++ +..||++||+|+|.+ |++|||+||+|||+.....+||+|||+||.+
T Consensus 85 L~fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 85 LYFVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred EeeeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccc
Confidence 999999996 599999986543 367999999999998 9999999999999998899999999999976
Q ss_pred ccccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--h---hhhccCh-----
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVESNLPE--N---VLQVLDP----- 861 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~---~~~~~~~----- 861 (929)
.. ....+..+.|.+|+|||++.. +.|+.+.|||++||+++|+....-.+....+ . +-+++..
T Consensus 161 ~S-------kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~ 233 (538)
T KOG0661|consen 161 RS-------KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDS 233 (538)
T ss_pred cc-------CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCcccc
Confidence 31 233566789999999998764 5689999999999999886544333332222 1 1111110
Q ss_pred -----HHHHhhcccchh------hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 862 -----ELRQLMTSNESQ------TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 862 -----~l~~~~~~~~~~------~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
.+...+.-...+ ..-.+.+..+.++ ++.+|++|||++||||+|+++.
T Consensus 234 ~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~-li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 234 WPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAAS-LIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred chhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHH-HHHHHhcCCCccCccHHHHhcC
Confidence 010000000000 0001123344555 8889999999999999999864
No 29
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-35 Score=313.42 Aligned_cols=233 Identities=24% Similarity=0.338 Sum_probs=180.4
Q ss_pred HHhhCCCCCceeecccCceeEEeccccCc-------------------HHHHHHHHHHHHcc-CCccccceeeecccCCC
Q 002376 657 RRATGNFSHENLIGSGSFGSVLHNERTGS-------------------WKSFIAECETLRNV-RHRNLVKLITSCSSLDS 716 (929)
Q Consensus 657 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~-------------------~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~ 716 (929)
++...+|.+.+.||+|+|++||+|+.... .+-..+|-.+|.++ .||.||+|+..|.+..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~- 147 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE- 147 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc-
Confidence 44567899999999999999999987632 22344788899999 8999999999985443
Q ss_pred CCcceEEEEEEecCCCCcccccccc--------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccc
Q 002376 717 KNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788 (929)
Q Consensus 717 ~~~~~~~lV~e~~~~gsL~~~l~~~--------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGl 788 (929)
.+|+|+||+++|+|.+++++. |.++.+|..|++|||+. |||||||||+|||+|+||++||+|||.
T Consensus 148 ----sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGs 220 (604)
T KOG0592|consen 148 ----SLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGS 220 (604)
T ss_pred ----ceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccc
Confidence 499999999999999999853 45688999999999998 999999999999999999999999999
Q ss_pred ccccccccCCCC-------CccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhcc
Q 002376 789 ARFLLERVDNQS-------SISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQVL 859 (929)
Q Consensus 789 a~~~~~~~~~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~~ 859 (929)
|+.+.+...... .......++||..|++||++.....+..+|+|++||++|.|..+.-++....+ .+.+++
T Consensus 221 AK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~ 300 (604)
T KOG0592|consen 221 AKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQ 300 (604)
T ss_pred cccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHH
Confidence 998865433211 11112568999999999999999999999999999988877665555554444 122222
Q ss_pred ChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 860 DPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 860 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
+-.. ++++..++.+++|+.+.+..||.+|+|..+|-+-
T Consensus 301 ~l~y------------~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 301 ALDY------------EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred Hhcc------------cCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 2111 1111223444557779999999999999887653
No 30
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.4e-35 Score=310.90 Aligned_cols=172 Identities=28% Similarity=0.395 Sum_probs=142.0
Q ss_pred CCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
+.|+..++||+|+||.||+|++.. ......+||.+|++++||||+++.+..++. ....+
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~---~~~si 193 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK---LSGSI 193 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec---CCceE
Confidence 356667889999999999998762 234567999999999999999999998764 23459
Q ss_pred EEEEEecCCCCccccccc---------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHG---------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~---------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
|||+|||++ ||.-++.. .+.+..|++.||+|+|++ +|+|||||.+|||||.+|.+||+|||+|+++.
T Consensus 194 YlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 194 YLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYT 269 (560)
T ss_pred EEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeecc
Confidence 999999986 77776652 234578999999999998 99999999999999999999999999999875
Q ss_pred cccCCCCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCcchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEFNIV 844 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~~~~ 844 (929)
.... ...+..+-|.+|+|||++.|.. |+.++|+||.||++.|+...
T Consensus 270 ~~~~-----~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~g 316 (560)
T KOG0600|consen 270 PSGS-----APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLG 316 (560)
T ss_pred CCCC-----cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcC
Confidence 3311 1244557799999999999875 99999999999988776443
No 31
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-35 Score=316.06 Aligned_cols=226 Identities=22% Similarity=0.285 Sum_probs=174.4
Q ss_pred CCCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV 725 (929)
.|..-.+||+|+.|.||.++... ..+-..+|+.+|+..+|+|||++++.|...+ .+|+|
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~d-----eLWVV 348 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGD-----ELWVV 348 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccc-----eeEEE
Confidence 45556789999999999887652 2345779999999999999999999886543 48999
Q ss_pred EEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 726 YEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
||||++|+|.|.+...+ .++.++++||+|||.+ +|+|||||.+|||++.+|.+||+|||++..+..+..
T Consensus 349 MEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~- 424 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS- 424 (550)
T ss_pred EeecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccC-
Confidence 99999999999987543 3356788999999998 999999999999999999999999999987754321
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLH 878 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 878 (929)
.....+||+.|||||++....|++|+||||+|+.+.||.-++-++-. ...+. ++.- +..........+
T Consensus 425 -----KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln-E~Plr-----AlyL-Ia~ng~P~lk~~ 492 (550)
T KOG0578|consen 425 -----KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN-ENPLR-----ALYL-IATNGTPKLKNP 492 (550)
T ss_pred -----ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC-CChHH-----HHHH-HhhcCCCCcCCc
Confidence 34456999999999999999999999999999777665333322211 00111 1111 111222333444
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 879 DCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 879 ~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
+.++..++++..+|++.||++||++.|+++
T Consensus 493 ~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 493 EKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred cccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 556677777888999999999999999985
No 32
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.6e-34 Score=322.21 Aligned_cols=237 Identities=21% Similarity=0.314 Sum_probs=171.8
Q ss_pred hCCCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHcc-CCccccceeeecccCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSLDS 716 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~ 716 (929)
.++|+..++||+|+||.||+|.+. ...+.+.+|+.+++++ +|||||+++++|...+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~- 84 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN- 84 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC-
Confidence 467888999999999999998531 1134688999999999 8999999999986432
Q ss_pred CCcceEEEEEEecCCCCccccccccc------------------------------------------------------
Q 002376 717 KNMEFLALVYEFLSNGSLGDWIHGER------------------------------------------------------ 742 (929)
Q Consensus 717 ~~~~~~~lV~e~~~~gsL~~~l~~~~------------------------------------------------------ 742 (929)
...++||||+++|+|.++++..+
T Consensus 85 ---~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T cd05102 85 ---GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ 161 (338)
T ss_pred ---CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence 24799999999999998886321
Q ss_pred ----------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCCccccc
Q 002376 743 ----------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTH 806 (929)
Q Consensus 743 ----------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~ 806 (929)
.++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+..... .....
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~----~~~~~ 234 (338)
T cd05102 162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD----YVRKG 234 (338)
T ss_pred hccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcc----hhccc
Confidence 1245899999999998 999999999999999999999999999986532111 11112
Q ss_pred eeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHHHHHHH
Q 002376 807 VFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITII 885 (929)
Q Consensus 807 ~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 885 (929)
...+++.|||||++.+..++.++||||+|+++|++.. ...++..... +..+........... .+......+
T Consensus 235 ~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~------~~~~~~~~~~~~~~~--~~~~~~~~l 306 (338)
T cd05102 235 SARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI------NEEFCQRLKDGTRMR--APENATPEI 306 (338)
T ss_pred CCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCc------cHHHHHHHhcCCCCC--CCCCCCHHH
Confidence 2356788999999999999999999999988877542 2222221110 111111111111000 011112223
Q ss_pred HHHhccccCCCCCCCCCHHHHHHHHHhhHH
Q 002376 886 GSVGLSCTTESPGGRIGIREALRRLKSSQE 915 (929)
Q Consensus 886 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~ 915 (929)
.+++.+||+.||++||||.|++++|+++.+
T Consensus 307 ~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 307 YRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 348889999999999999999999998765
No 33
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-34 Score=311.35 Aligned_cols=240 Identities=22% Similarity=0.337 Sum_probs=185.1
Q ss_pred HHHHHhhCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHccCCccccceeeecccCCCCC
Q 002376 654 DELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 654 ~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 718 (929)
++++...-+....++||-|.||.||.|.|++ ..++|.+|+.+|+.++|||+|+++|+|.....
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP-- 337 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP-- 337 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC--
Confidence 4444434456677899999999999999873 25789999999999999999999999976544
Q ss_pred cceEEEEEEecCCCCcccccccccc----------ccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGERK----------NELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~~----------~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGl 788 (929)
+|||+|||.+|+|.+||++..+ .+.||+.||+||... .+||||+.++|+|+.++..+||+|||+
T Consensus 338 ---FYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGL 411 (1157)
T KOG4278|consen 338 ---FYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGL 411 (1157)
T ss_pred ---eEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccch
Confidence 7999999999999999985432 267999999999998 899999999999999999999999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhh
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLM 867 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~ 867 (929)
+|++..+.- .......-.+.|.|||.+....++.|+|||+||+++||+.++-+ ..||. ...++.+-- ...+
T Consensus 412 sRlMtgDTY-----TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGM--sPYPGidlSqVY~LL-Ekgy 483 (1157)
T KOG4278|consen 412 SRLMTGDTY-----TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGM--SPYPGIDLSQVYGLL-EKGY 483 (1157)
T ss_pred hhhhcCCce-----ecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCC--CCCCCccHHHHHHHH-hccc
Confidence 999864311 11111122568999999999999999999999988888554332 33443 222322211 1112
Q ss_pred cccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHH
Q 002376 868 TSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQE 915 (929)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~ 915 (929)
.++..+ -|..++++ ||++||+|+|.+||+++|+-+.+|.+..
T Consensus 484 RM~~Pe-----GCPpkVYe-LMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 484 RMDGPE-----GCPPKVYE-LMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred cccCCC-----CCCHHHHH-HHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 222221 36677777 9999999999999999999999988654
No 34
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-34 Score=300.61 Aligned_cols=237 Identities=23% Similarity=0.266 Sum_probs=174.1
Q ss_pred HHhhCCCCCceeecccCceeEEecccc------------------------------CcHHHHHHHHHHHHccCCccccc
Q 002376 657 RRATGNFSHENLIGSGSFGSVLHNERT------------------------------GSWKSFIAECETLRNVRHRNLVK 706 (929)
Q Consensus 657 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~------------------------------~~~~~~~~E~~~l~~l~Hpniv~ 706 (929)
.+..++|+..+.||+|.||+|-+|+.. ...+...+||.+|++++|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 345678999999999999999776654 11357889999999999999999
Q ss_pred eeeecccCCCCCcceEEEEEEecCCCCcccccc--------ccccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC
Q 002376 707 LITSCSSLDSKNMEFLALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE 778 (929)
Q Consensus 707 l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~--------~~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~ 778 (929)
++++.-+. ....+|||+|||..|.+...-. .+|++..++..||+|||.+ +||||||||+|+|++++
T Consensus 173 LiEvLDDP---~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~ 246 (576)
T KOG0585|consen 173 LIEVLDDP---ESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSD 246 (576)
T ss_pred EEEeecCc---ccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCC
Confidence 99997553 3456999999999998765322 3566788999999999999 99999999999999999
Q ss_pred CceEEeccccccccccccCCCCCccccceeccccccccccccCCCC----CCCCCCCCCCcCCCCCcchhHHhhhcCCch
Q 002376 779 MTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER----PSTAGDVPTSESFAGEFNIVKWVESNLPEN 854 (929)
Q Consensus 779 ~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~ 854 (929)
|++||+|||.+.......... ........+|||.|||||...++. .+.+.||||+|+++|.+..+..++..- .
T Consensus 247 g~VKIsDFGVs~~~~~~~~~~-~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~--~ 323 (576)
T KOG0585|consen 247 GTVKISDFGVSNEFPQGSDEG-SDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD--F 323 (576)
T ss_pred CcEEeeccceeeecccCCccc-cHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc--h
Confidence 999999999998664331111 112234468999999999988743 478999999998777765444443211 2
Q ss_pred hhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 855 VLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 855 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..+..+......+..... ..+.+.+++|+.++++.||++|.+..||..
T Consensus 324 ~~~l~~KIvn~pL~fP~~------pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 324 ELELFDKIVNDPLEFPEN------PEINEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred HHHHHHHHhcCcccCCCc------ccccHHHHHHHHHHhhcChhheeehhhhee
Confidence 222233322221111000 123455667888999999999999988753
No 35
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=3e-36 Score=340.23 Aligned_cols=462 Identities=26% Similarity=0.340 Sum_probs=379.3
Q ss_pred EEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceeccccccc
Q 002376 76 LNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKI 155 (929)
Q Consensus 76 l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 155 (929)
+|++..+++ .||..+-.-..++.|+++.|-+-...-+...+.-+|+.||||+|++. ..|..+..+..|+.|+++.|.|
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i 80 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYI 80 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhH
Confidence 456666666 67777766667999999999876332333445556999999999998 8999999999999999999999
Q ss_pred CCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecC
Q 002376 156 TGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQ 235 (929)
Q Consensus 156 ~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 235 (929)
. .+|.. ..++.+|++|+|.+|.+ ...|..+..+++|+.||+|+|++. .+|..+..++.++.+..++|.
T Consensus 81 ~-~vp~s-~~~~~~l~~lnL~~n~l---------~~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~ 148 (1081)
T KOG0618|consen 81 R-SVPSS-CSNMRNLQYLNLKNNRL---------QSLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNE 148 (1081)
T ss_pred h-hCchh-hhhhhcchhheeccchh---------hcCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcch
Confidence 8 67755 89999999999999986 346778888999999999999998 789999999999999999993
Q ss_pred CCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCC
Q 002376 236 LGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDD 315 (929)
Q Consensus 236 l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~ 315 (929)
....++. ...+.+++..|.+.+.++..+.+++. .|||.+|.+. . -.+.++.+|+.+....|++.....
T Consensus 149 ~~~~lg~------~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~-~--~dls~~~~l~~l~c~rn~ls~l~~- 216 (1081)
T KOG0618|consen 149 KIQRLGQ------TSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME-V--LDLSNLANLEVLHCERNQLSELEI- 216 (1081)
T ss_pred hhhhhcc------ccchhhhhhhhhcccchhcchhhhhe--eeecccchhh-h--hhhhhccchhhhhhhhcccceEEe-
Confidence 2212221 22677888889999999988888887 8999999997 2 346788899999999999876532
Q ss_pred CCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCc
Q 002376 316 EGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPI 395 (929)
Q Consensus 316 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 395 (929)
..++|+.|+.++|.++...+.. .+.+|+++++++|++++ +|++++.+.+|+.++..+|+++ .+|.
T Consensus 217 ----------~g~~l~~L~a~~n~l~~~~~~p---~p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ 281 (1081)
T KOG0618|consen 217 ----------SGPSLTALYADHNPLTTLDVHP---VPLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPL 281 (1081)
T ss_pred ----------cCcchheeeeccCcceeecccc---ccccceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHH
Confidence 3478999999999998443322 23479999999999995 5699999999999999999996 7899
Q ss_pred cccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccc-cceecccCCcCCCCCCCCcccCCc
Q 002376 396 EIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQS-LLSIDLSNNRINGNIPKGILRPLP 474 (929)
Q Consensus 396 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~g~i~~~~~~~~p 474 (929)
.+..+++|+.|....|.++ .+|.....++.|++|||..|+|....+..|.-+.. |..|+.+.|+++. .|.
T Consensus 282 ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~-lp~------- 352 (1081)
T KOG0618|consen 282 RISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLST-LPS------- 352 (1081)
T ss_pred HHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccc-ccc-------
Confidence 9999999999999999998 57777888999999999999998444433443333 7888888888862 220
Q ss_pred hhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCC
Q 002376 475 EEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQA 554 (929)
Q Consensus 475 ~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 554 (929)
-+=.....|+.|++.+|.|+...-..+.+.+.|+.|+|++|+|...+...+.++..|+.|+||+|+|+ .+|..+.++..
T Consensus 353 ~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~ 431 (1081)
T KOG0618|consen 353 YEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGR 431 (1081)
T ss_pred ccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhh
Confidence 01123467899999999999888778999999999999999999777778899999999999999999 78999999999
Q ss_pred CCeEeCCCCcCcccCCCCCCCCCCCcccccCCCCC
Q 002376 555 LRSLNLTFNNLEGVVPSEGIFRNMSNVHLKGNPKL 589 (929)
Q Consensus 555 L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~N~~~ 589 (929)
|++|...+|++...+ +..+.+.++.++++.|...
T Consensus 432 L~tL~ahsN~l~~fP-e~~~l~qL~~lDlS~N~L~ 465 (1081)
T KOG0618|consen 432 LHTLRAHSNQLLSFP-ELAQLPQLKVLDLSCNNLS 465 (1081)
T ss_pred hHHHhhcCCceeech-hhhhcCcceEEecccchhh
Confidence 999999999999764 7778899999999988543
No 36
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-35 Score=305.21 Aligned_cols=224 Identities=24% Similarity=0.305 Sum_probs=172.2
Q ss_pred CCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
..|...+.||+|+||.||||.+.. ..++..+|+.++..++++||.+++|.+..... ++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~-----Lw 87 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTK-----LW 87 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeeccc-----HH
Confidence 356667899999999999998762 24577889999999999999999999876443 89
Q ss_pred EEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
++||||.+|++.+.++... .+..++..|+.|+|.+ +.+|||||+.|||+..+|.+|++|||++..+...
T Consensus 88 iiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~ 164 (467)
T KOG0201|consen 88 IIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNT 164 (467)
T ss_pred HHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeech
Confidence 9999999999999887332 2357899999999998 9999999999999999999999999999877432
Q ss_pred cCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhcccchhh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMTSNESQT 874 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~ 874 (929)
......++||+.|||||++.+..|+.|+||||+|++++|+..++-++..... ++.-.+ ++..++.
T Consensus 165 ------~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI--------pk~~PP~ 230 (467)
T KOG0201|consen 165 ------VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI--------PKSAPPR 230 (467)
T ss_pred ------hhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec--------cCCCCCc
Confidence 2223568999999999999988999999999999888776555544433321 111111 1111111
Q ss_pred hhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 875 IQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 875 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.+ ....+.+++++..|++.||+.||+|.++++
T Consensus 231 L~--~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 231 LD--GDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred cc--cccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 11 112333444666999999999999999874
No 37
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=7.1e-34 Score=312.00 Aligned_cols=237 Identities=23% Similarity=0.311 Sum_probs=167.9
Q ss_pred CCCCCceeecccCceeEEecccc---------------------------------CcHHHHHHHHHHHHccCCccccce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT---------------------------------GSWKSFIAECETLRNVRHRNLVKL 707 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~---------------------------------~~~~~~~~E~~~l~~l~Hpniv~l 707 (929)
++|...++||+|+||.||++.+. ...++|.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 46788899999999999987521 113468899999999999999999
Q ss_pred eeecccCCCCCcceEEEEEEecCCCCccccccccc---------------------------cccccHHHHHHHhhhCCC
Q 002376 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER---------------------------KNELDITSALDYLHNDCE 760 (929)
Q Consensus 708 ~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------------------~~~~~ia~aL~yLH~~~~ 760 (929)
++++.+.+ ..++||||+++|+|.+++.... .++.|++.||+|||+.
T Consensus 85 ~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-- 157 (304)
T cd05096 85 LGVCVDED-----PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL-- 157 (304)
T ss_pred EEEEecCC-----ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC--
Confidence 99986533 3799999999999998875321 3467899999999998
Q ss_pred CCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCC
Q 002376 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGE 840 (929)
Q Consensus 761 ~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~ 840 (929)
+|+||||||+||++++++.+||+|||+++.+..... ........++..|||||++.++.++.++||||+|+++++
T Consensus 158 -~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~e 232 (304)
T cd05096 158 -NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY----YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWE 232 (304)
T ss_pred -CccccCcchhheEEcCCccEEECCCccceecccCce----eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHH
Confidence 899999999999999999999999999986532110 011122346789999999998899999999999988877
Q ss_pred cch--hHHhhhcCCc-hhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 841 FNI--VKWVESNLPE-NVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 841 ~~~--~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
+.. ...++..... ...+.+............ ....+.+...+ .+++.+||+.||++||||.||.+.|++
T Consensus 233 l~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 233 ILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVY--LFRPPPCPQGL-YELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred HHHccCCCCCCcCCHHHHHHHHHHHhhhcccccc--ccCCCCCCHHH-HHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 532 1122221111 111111010000000000 00001112223 348889999999999999999998864
No 38
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=311.97 Aligned_cols=226 Identities=28% Similarity=0.344 Sum_probs=171.9
Q ss_pred HhhCCCCCceeecccCceeEEeccccC---------------------cHHHHHHHHHHHHccC-CccccceeeecccCC
Q 002376 658 RATGNFSHENLIGSGSFGSVLHNERTG---------------------SWKSFIAECETLRNVR-HRNLVKLITSCSSLD 715 (929)
Q Consensus 658 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~---------------------~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~ 715 (929)
...+.|...+.||+|+||+|+.|+... ..+...+|+.++++++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 345689999999999999999986641 1335558999999999 999999999995533
Q ss_pred CCCcceEEEEEEecCCCCcccccccc--------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC-CceEEecc
Q 002376 716 SKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE-MTAKVGDF 786 (929)
Q Consensus 716 ~~~~~~~~lV~e~~~~gsL~~~l~~~--------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~-~~~ki~Df 786 (929)
.+|+||||+.+|+|.+++... +.+..|++.|++|+|+. +|+||||||+|||+|.+ +.+||+||
T Consensus 94 -----~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DF 165 (370)
T KOG0583|consen 94 -----KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDF 165 (370)
T ss_pred -----eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEecc
Confidence 389999999999999998752 34578999999999998 99999999999999999 99999999
Q ss_pred ccccccccccCCCCCccccceeccccccccccccCCCC-C-CCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHH
Q 002376 787 GLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER-P-STAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELR 864 (929)
Q Consensus 787 Gla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~-~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 864 (929)
|++.... .........+||+.|+|||++.+.. | +.++||||+|+++|.+..+.+++.... .+.+.
T Consensus 166 G~s~~~~------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~-------~~~l~ 232 (370)
T KOG0583|consen 166 GLSAISP------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN-------VPNLY 232 (370)
T ss_pred ccccccC------CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc-------HHHHH
Confidence 9998762 1123345679999999999999987 7 599999999977666655555544311 11111
Q ss_pred HhhcccchhhhhhhHHH-HHHHHHHhccccCCCCCCCCCHHHHH
Q 002376 865 QLMTSNESQTIQLHDCL-ITIIGSVGLSCTTESPGGRIGIREAL 907 (929)
Q Consensus 865 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~Cl~~dP~~RPs~~ev~ 907 (929)
..+... ....+..+ ..-+++++.+|+..||.+|+++.|++
T Consensus 233 ~ki~~~---~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 233 RKIRKG---EFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred HHHhcC---CccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 111111 11111112 22233477799999999999999998
No 39
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.98 E-value=2.1e-33 Score=275.94 Aligned_cols=232 Identities=24% Similarity=0.314 Sum_probs=168.1
Q ss_pred CCCCCceeecccCceeEEeccccCc------------------HHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTGS------------------WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~~------------------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
++|...+++|+|.||.||+|++..+ .....+|++.|+.++||||+.++++|...+ .+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~-----~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKS-----NL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCC-----ce
Confidence 4677889999999999999987621 345779999999999999999999996544 38
Q ss_pred EEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.+|+|||+ .+|+..++... .++.++.+|++|+|++ .|+|||+||.|+|++++|.+||+|||+|+.+.
T Consensus 77 ~lVfEfm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~ 152 (318)
T KOG0659|consen 77 SLVFEFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFG 152 (318)
T ss_pred EEEEEecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccC
Confidence 99999996 49998887543 3467899999999998 89999999999999999999999999999875
Q ss_pred cccCCCCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCcchhHH-------------hhhcC----Cchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEFNIVKW-------------VESNL----PENV 855 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~~~~~~-------------~~~~~----~~~~ 855 (929)
.... ..+..+-|.+|+|||++.|.+ |+..+||||.||+..|+.+..- .++.+ ++.+
T Consensus 153 ~p~~------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~W 226 (318)
T KOG0659|consen 153 SPNR------IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQW 226 (318)
T ss_pred CCCc------ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccC
Confidence 3321 122226799999999988765 9999999999998766533221 11111 1111
Q ss_pred hhc---cChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 856 LQV---LDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 856 ~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
.++ -|-.-....+.. ....-++.+...++. ++..++..||.+|+++.|++++
T Consensus 227 P~~~~lpdY~~~~~~P~~-~~~~lf~aas~d~ld-Ll~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 227 PEMTSLPDYVKIQQFPKP-PLNNLFPAASSDALD-LLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccccccccHHHHhcCCCC-ccccccccccHHHHH-HHHhhhccCchhcccHHHHhcc
Confidence 111 111111111111 111112233344555 8889999999999999998764
No 40
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=3.6e-33 Score=294.66 Aligned_cols=251 Identities=23% Similarity=0.278 Sum_probs=179.4
Q ss_pred CCCCceeecccCceeEEeccccC-----------cHHHHHHHHHHHHc--cCCccccceeeecccCCCCCcceEEEEEEe
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG-----------SWKSFIAECETLRN--VRHRNLVKLITSCSSLDSKNMEFLALVYEF 728 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~-----------~~~~~~~E~~~l~~--l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~ 728 (929)
.....++||+|+||.||||.... +.+.|.+|-++.+. ++|+||++++++-...... ...++||+||
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~-~~eywLVt~f 289 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD-RMEYWLVTEF 289 (534)
T ss_pred chhhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCcc-ccceeEEeee
Confidence 34456789999999999998873 45678888888776 5899999999986554433 4468999999
Q ss_pred cCCCCcccccccc-------ccccccHHHHHHHhhhCC------CCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 729 LSNGSLGDWIHGE-------RKNELDITSALDYLHNDC------EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 729 ~~~gsL~~~l~~~-------~~~~~~ia~aL~yLH~~~------~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
.+.|+|.+||+.. .+++..+++||+|||+.. .|+|+|||||++|||+.+|+++.|+|||+|..+...
T Consensus 290 h~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~ 369 (534)
T KOG3653|consen 290 HPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPG 369 (534)
T ss_pred ccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCC
Confidence 9999999999743 355788999999999753 589999999999999999999999999999988654
Q ss_pred cCCCCCccccceeccccccccccccCCCC-C-----CCCCCCCCCcCCCCCcchhHHhh--hcCCc---hhhhc--cChH
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGER-P-----STAGDVPTSESFAGEFNIVKWVE--SNLPE---NVLQV--LDPE 862 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~-----~~~~DV~s~g~~~~~~~~~~~~~--~~~~~---~~~~~--~~~~ 862 (929)
..... ....+||.+|||||++.+.. + -.+.||||.|.++||+...--.. +..|+ .+.+. .+|.
T Consensus 370 ~~~~d----~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt 445 (534)
T KOG3653|consen 370 KPQGD----THGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPT 445 (534)
T ss_pred CCCcc----hhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCC
Confidence 33322 23358999999999987653 2 24689999997777653322111 22222 11111 1111
Q ss_pred ---HHHhhcccchhhhhhhH-----HHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 863 ---LRQLMTSNESQTIQLHD-----CLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 863 ---l~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
++..... ...++.+++ ...+++++.+..||+.||+.|-|+.=|.+++.++....+
T Consensus 446 ~e~mq~~VV~-kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 446 LEEMQELVVR-KKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred HHHHHHHHHh-hccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 1111111 111222211 123466668889999999999999999999988876554
No 41
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.98 E-value=1.2e-33 Score=281.55 Aligned_cols=213 Identities=23% Similarity=0.261 Sum_probs=164.7
Q ss_pred CCCCCceeecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||.|+||.|..++.+ ++.+...+|..+|+.+.||+++++++.|.+ ...
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d-----~~~ 118 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD-----NSN 118 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeecc-----CCe
Confidence 46777899999999999887765 223456689999999999999999999844 445
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
+||||||++||.|+.++++.+ .++.+|+.|++|||+. .|++||+||+|||+|.+|.+||+|||+|+.+.
T Consensus 119 lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~ 195 (355)
T KOG0616|consen 119 LYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVS 195 (355)
T ss_pred EEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEec
Confidence 999999999999999998643 4478999999999998 99999999999999999999999999999763
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
. .+...||||.|+|||++..+.|..++|=|++|+..|||..+..++..... .++....+.+
T Consensus 196 ~---------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--~~iY~KI~~~-------- 256 (355)
T KOG0616|consen 196 G---------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--IQIYEKILEG-------- 256 (355)
T ss_pred C---------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--HHHHHHHHhC--------
Confidence 1 24567999999999999999999999999999777776554444332221 2222222221
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCC
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGR 900 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~R 900 (929)
.+..+..+...+++|+...++.|-.+|
T Consensus 257 ~v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 257 KVKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred cccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 112222333444456667788888888
No 42
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.98 E-value=8.4e-34 Score=303.58 Aligned_cols=223 Identities=25% Similarity=0.347 Sum_probs=172.4
Q ss_pred CCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
++|...+.||+|+||.||||+++. +.+...+|++++++++|||||.++++|. ...++
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfE-----t~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFE-----TSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhc-----ccceE
Confidence 578888999999999999999872 2345889999999999999999999994 44459
Q ss_pred EEEEEecCCCCcccccccc--------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGE--------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~--------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
|+|.||+.| +|+.++... +.++.++..||.|||+. +|+|||+||.|||++..|.+|+||||+||.+..
T Consensus 77 ~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 77 WVVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST 152 (808)
T ss_pred EEEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc
Confidence 999999975 999998743 34577889999999998 999999999999999999999999999998743
Q ss_pred ccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQT 874 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 874 (929)
.....+.+.|||.|||||++.+.+|+..+|.||+||++||+..+.-++... .+.+.+.....+ ...+.
T Consensus 153 ------~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~--si~~Lv~~I~~d----~v~~p 220 (808)
T KOG0597|consen 153 ------NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR--SITQLVKSILKD----PVKPP 220 (808)
T ss_pred ------CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH--HHHHHHHHHhcC----CCCCc
Confidence 222345678999999999999999999999999999988865544332211 233322222221 22222
Q ss_pred hhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 875 IQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 875 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.....+... +....+..||.+|.+-.+++.
T Consensus 221 ~~~S~~f~n----fl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 221 STASSSFVN----FLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred ccccHHHHH----HHHHHhhcChhhcccHHHHhc
Confidence 223334444 444889999999999888763
No 43
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.98 E-value=3.9e-34 Score=295.18 Aligned_cols=243 Identities=22% Similarity=0.325 Sum_probs=171.0
Q ss_pred CCCCCceeecccCceeEEeccccCcHH------------HHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEe
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTGSWK------------SFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF 728 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~------------~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~ 728 (929)
-.|...+++|.|+||.||+|......+ ---+|+++|++++|||||++..+|......+.-+..+||||
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVley 103 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEY 103 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHh
Confidence 356778999999999999998764322 22379999999999999999998887665434567899999
Q ss_pred cCCCCccccccc-----c-------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC-CceEEeccccccccccc
Q 002376 729 LSNGSLGDWIHG-----E-------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE-MTAKVGDFGLARFLLER 795 (929)
Q Consensus 729 ~~~gsL~~~l~~-----~-------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~-~~~ki~DfGla~~~~~~ 795 (929)
||. +|+++++. . +.+..|+.+||+|||+. +|+||||||.|+|+|.+ |.+||||||.|+.+...
T Consensus 104 mP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ 179 (364)
T KOG0658|consen 104 MPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG 179 (364)
T ss_pred chH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceeeccC
Confidence 985 89888872 1 23367999999999997 99999999999999976 89999999999987543
Q ss_pred cCCCCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhccC-------hHHHH
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQVLD-------PELRQ 865 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~~~-------~~l~~ 865 (929)
.. .....-|..|+|||.+.|.. |+.+.||||.||++.|+..+.-.+..-.. .+.++++ .++..
T Consensus 180 ep-------niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~ 252 (364)
T KOG0658|consen 180 EP-------NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKS 252 (364)
T ss_pred CC-------ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 22 12345688999999998865 99999999999988887555544332111 1111110 01110
Q ss_pred hhcc-----------cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH--HHhhHH
Q 002376 866 LMTS-----------NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR--LKSSQE 915 (929)
Q Consensus 866 ~~~~-----------~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~--L~~~~~ 915 (929)
.-+. ..-.+......-++.++ ++.+++..+|.+|.++.|++.. .++++.
T Consensus 253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~d-ll~~~L~Y~P~~R~~~~~~l~h~fFdelr~ 314 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALD-LLSKLLQYSPSKRLSALEALAHPFFDELRD 314 (364)
T ss_pred cCcccccccCcccccccceeecccCCCHHHHH-HHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence 0000 00000011112234555 8889999999999999998743 444433
No 44
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.97 E-value=1.3e-33 Score=285.27 Aligned_cols=171 Identities=26% Similarity=0.364 Sum_probs=141.9
Q ss_pred hCCCCCceeecccCceeEEeccccCcH------------------HHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTGSW------------------KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~------------------~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.+.|+..+.|++|+||.||+|+++.+. -...+||.++.+++|||||.+..+.... ....
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~---~~d~ 151 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGS---NMDK 151 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecc---ccce
Confidence 345677799999999999999988432 1356999999999999999999988653 3455
Q ss_pred EEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
+|+|||||+. ||...++..+ ....|+++|++|||.. .|+|||+|++|+|+.+.|.+||+|||+||.+
T Consensus 152 iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 152 IYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred eeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhh
Confidence 9999999976 8888776433 3367999999999998 8999999999999999999999999999987
Q ss_pred ccccCCCCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCcch
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEFNI 843 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~~~ 843 (929)
... ....+..+-|.+|+|||++.+.+ |+++.|+||.||++.|+..
T Consensus 228 gsp------~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~ 273 (419)
T KOG0663|consen 228 GSP------LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLT 273 (419)
T ss_pred cCC------cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHh
Confidence 432 22345567899999999998875 9999999999998776533
No 45
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=6.4e-33 Score=299.96 Aligned_cols=227 Identities=27% Similarity=0.324 Sum_probs=179.3
Q ss_pred CCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
++|...+.+|+|+||.++..+++. .++...+|+.++++++|||||.+.+.|... ....
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~----~~~l 79 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEED----GQLL 79 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcC----CceE
Confidence 578888999999999998777652 244677999999999999999999998643 2348
Q ss_pred EEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
++||+||+||++.+.+.+.+ .+..|++.|+.|||+. .|+|||||+.||++..+..+|++|||+|+.+
T Consensus 80 ~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l 156 (426)
T KOG0589|consen 80 CIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKIL 156 (426)
T ss_pred EEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhc
Confidence 99999999999999987554 2257899999999987 8999999999999999999999999999988
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
.... .....++||+.||.||++.+.+|..|+||||+||.+||+....+++..... ...+.......+...+.
T Consensus 157 ~~~~------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m--~~Li~ki~~~~~~Plp~ 228 (426)
T KOG0589|consen 157 NPED------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM--SELILKINRGLYSPLPS 228 (426)
T ss_pred CCch------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch--HHHHHHHhhccCCCCCc
Confidence 5432 133457899999999999999999999999999999999888888765543 11122222221111111
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
.....+.. ++..|+..+|+.||++.+++.+
T Consensus 229 ---~ys~el~~----lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 229 ---MYSSELRS----LVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ---cccHHHHH----HHHHHhhcCCccCCCHHHHhhC
Confidence 11122333 6669999999999999999987
No 46
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.97 E-value=6.5e-33 Score=312.70 Aligned_cols=234 Identities=19% Similarity=0.294 Sum_probs=168.3
Q ss_pred hCCCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHcc-CCccccceeeecccCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSLDS 716 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~ 716 (929)
.++|+..+.||+|+||.||+|++. ...+.+.+|+++++.+ +|||||+++++|...+
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~- 112 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG- 112 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC-
Confidence 447888899999999999987531 1234678999999999 8999999999996543
Q ss_pred CCcceEEEEEEecCCCCccccccccc------------------------------------------------------
Q 002376 717 KNMEFLALVYEFLSNGSLGDWIHGER------------------------------------------------------ 742 (929)
Q Consensus 717 ~~~~~~~lV~e~~~~gsL~~~l~~~~------------------------------------------------------ 742 (929)
..++||||+++|+|.++++..+
T Consensus 113 ----~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 113 ----PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ----cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 3799999999999998885321
Q ss_pred -----------------------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 743 -----------------------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 743 -----------------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIR 265 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceecc
Confidence 1245899999999998 99999999999999999999999999998653
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
.... ........++..|||||++.+..++.++||||+|++++++.. ...++...+. +............
T Consensus 266 ~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~------~~~~~~~~~~~~~ 335 (375)
T cd05104 266 NDSN----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV------DSKFYKMIKEGYR 335 (375)
T ss_pred Cccc----ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc------hHHHHHHHHhCcc
Confidence 2111 011112345678999999999999999999999988877543 2222222211 0111111111000
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
...+.....-+++++.+||+.||++||+|+||+++|++.
T Consensus 336 --~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 336 --MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred --CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 000011112233488899999999999999999999863
No 47
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.97 E-value=3.7e-33 Score=299.67 Aligned_cols=237 Identities=24% Similarity=0.335 Sum_probs=177.7
Q ss_pred CCCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV 725 (929)
.....++||+|-||+|..+...+ ..++|.+|+++|.+++|||||+++|+|...++ +++|
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DeP-----icmI 613 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDP-----LCMI 613 (807)
T ss_pred heehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCc-----hHHH
Confidence 44556899999999998765431 35789999999999999999999999987665 8999
Q ss_pred EEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 726 YEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
+|||++|+|.+|+.+.. .++.|||.||+||.+. ++||||+.++|+|+|.++++||+|||++|-+...
T Consensus 614 ~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg 690 (807)
T KOG1094|consen 614 TEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSG 690 (807)
T ss_pred HHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccC
Confidence 99999999999986431 3478999999999998 9999999999999999999999999999965322
Q ss_pred cCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhcccchh-
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMTSNESQ- 873 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~- 873 (929)
.........+-..+|||||.+.-+++++++|||+||+++||+...- -...+.+ .-.++++ ...+.+......
T Consensus 691 ----~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C-~e~Py~~lt~e~vve-n~~~~~~~~~~~~ 764 (807)
T KOG1094|consen 691 ----DYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLC-REQPYSQLTDEQVVE-NAGEFFRDQGRQV 764 (807)
T ss_pred ----CceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHH-hhCchhhhhHHHHHH-hhhhhcCCCCcce
Confidence 1111223345678999999999999999999999999888853221 1112222 1112222 112222211111
Q ss_pred -hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 874 -TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 874 -~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
.....-|..++++ ++.+||.+|.++||+++++...|++.
T Consensus 765 ~l~~P~~cp~~lye-lml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 765 VLSRPPACPQGLYE-LMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred eccCCCcCcHHHHH-HHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1111235566776 99999999999999999999888764
No 48
>PHA02988 hypothetical protein; Provisional
Probab=99.97 E-value=2.5e-32 Score=296.08 Aligned_cols=241 Identities=18% Similarity=0.160 Sum_probs=176.1
Q ss_pred CCChHHHHHhhCCCCCceeecccCceeEEeccccC--------------c---HHHHHHHHHHHHccCCccccceeeecc
Q 002376 650 KISYDELRRATGNFSHENLIGSGSFGSVLHNERTG--------------S---WKSFIAECETLRNVRHRNLVKLITSCS 712 (929)
Q Consensus 650 ~~~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~--------------~---~~~~~~E~~~l~~l~Hpniv~l~~~~~ 712 (929)
.++.+++.. .....||+|++|.||+|++.+ . .+.|.+|+.++++++|||||+++|++.
T Consensus 14 ~i~~~~i~~-----~~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~ 88 (283)
T PHA02988 14 CIESDDIDK-----YTSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFII 88 (283)
T ss_pred ecCHHHcCC-----CCCeEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEE
Confidence 455666633 223689999999999998752 1 356779999999999999999999986
Q ss_pred cCCCCCcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEe
Q 002376 713 SLDSKNMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVG 784 (929)
Q Consensus 713 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~ 784 (929)
+.. ......++||||+++|+|.++++..+ .++.+++.|++|||+.. +++||||||+||++++++.+||+
T Consensus 89 ~~~-~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~ 165 (283)
T PHA02988 89 DIV-DDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKII 165 (283)
T ss_pred ecc-cCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEc
Confidence 521 12345799999999999999987543 23578999999999742 68899999999999999999999
Q ss_pred ccccccccccccCCCCCccccceeccccccccccccCC--CCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChH
Q 002376 785 DFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG--ERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE 862 (929)
Q Consensus 785 DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (929)
|||+++.+... .....|+..|+|||++.+ ..++.++||||+|+++|++..+..++..... .++.+..
T Consensus 166 dfg~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~--~~~~~~i 234 (283)
T PHA02988 166 CHGLEKILSSP---------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT--KEIYDLI 234 (283)
T ss_pred ccchHhhhccc---------cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH--HHHHHHH
Confidence 99999865311 122468899999999976 6799999999999888887665555443321 1111111
Q ss_pred HHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHH
Q 002376 863 LRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQE 915 (929)
Q Consensus 863 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~ 915 (929)
... ... ...+......+++++.+||+.||++||||+|+++.|++...
T Consensus 235 ~~~----~~~--~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 235 INK----NNS--LKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred Hhc----CCC--CCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 111 000 11110112234448889999999999999999999998754
No 49
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=6.2e-33 Score=303.36 Aligned_cols=224 Identities=23% Similarity=0.296 Sum_probs=175.2
Q ss_pred CCCCCceeecccCceeEEeccccCc-------------------HHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTGS-------------------WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~~-------------------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
+-|+.++.||+|+-|.|-.|++..+ ...+.+|+.+|+-+.||||+++++++. +..+
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe-----~~~~ 86 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWE-----NKQH 86 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeec-----cCce
Confidence 4577789999999999988876521 345779999999999999999999994 4556
Q ss_pred EEEEEEecCCCCccccccc--------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~--------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
+|+|.||+++|.|++++-. +.++..||..|+.|+|+. +|+|||+||+|+|+|.+..+||+|||+|..-.
T Consensus 87 lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~ 163 (786)
T KOG0588|consen 87 LYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEV 163 (786)
T ss_pred EEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeeccc
Confidence 9999999999999999853 335578999999999998 89999999999999999999999999997532
Q ss_pred cccCCCCCccccceeccccccccccccCCCCC-CCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERP-STAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
.......-||++.|.|||+++|.+| +.++||||.|+++|.+.++.+++. |..++..+.+-..
T Consensus 164 -------~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd----------DdNir~LLlKV~~ 226 (786)
T KOG0588|consen 164 -------PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD----------DDNIRVLLLKVQR 226 (786)
T ss_pred -------CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC----------CccHHHHHHHHHc
Confidence 2223445699999999999999998 899999999987776655555544 2222222222111
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
...+.+..++.-+++|..+++..||++|.|++||.+-
T Consensus 227 G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 227 GVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred CcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 1122223445556668889999999999999999863
No 50
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-32 Score=299.54 Aligned_cols=221 Identities=22% Similarity=0.318 Sum_probs=174.6
Q ss_pred eeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEecC
Q 002376 667 NLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLS 730 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~ 730 (929)
-++|+|.||+||.|++.. ..+-...|+..-++++|.|||+++|.|. ..+++-+.||-+|
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~s-----enGf~kIFMEqVP 655 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVS-----ENGFFKIFMEQVP 655 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccC-----CCCeEEEEeecCC
Confidence 479999999999998762 2234668999999999999999999984 3446889999999
Q ss_pred CCCcccccccc-----------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeec-CCCceEEeccccccccccccCC
Q 002376 731 NGSLGDWIHGE-----------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLD-EEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 731 ~gsL~~~l~~~-----------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~-~~~~~ki~DfGla~~~~~~~~~ 798 (929)
||+|.+.++.. ..+..||++||.|||.+ .|||||||-.||||+ -.|.+||+|||.++.+..
T Consensus 656 GGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg---- 728 (1226)
T KOG4279|consen 656 GGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG---- 728 (1226)
T ss_pred CCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhcc----
Confidence 99999998732 13367999999999998 899999999999996 578999999999987632
Q ss_pred CCCccccceeccccccccccccCCCC--CCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGER--PSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQ 876 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 876 (929)
-...+..+.||..|||||++..++ |+.++|||||||...||.++.-++..+......++.-.+.. ..++
T Consensus 729 --inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyK-------vHP~ 799 (1226)
T KOG4279|consen 729 --INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYK-------VHPP 799 (1226)
T ss_pred --CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhccee-------cCCC
Confidence 112345678999999999998775 89999999999999888777766655544322222222222 1233
Q ss_pred hhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 877 LHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 877 ~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.++.+.+-.+.++.+|..+||.+||++.++++
T Consensus 800 iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 800 IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 44556666666888999999999999999875
No 51
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.97 E-value=2.4e-32 Score=296.90 Aligned_cols=245 Identities=22% Similarity=0.248 Sum_probs=174.6
Q ss_pred CCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
.|+..+.||+|+||+||++.... ....+.+|+.++++++||+|+++.+++.+. ...
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~-----~~~ 75 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETK-----DAL 75 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccC-----CeE
Confidence 36778999999999999987541 123467899999999999999999998543 348
Q ss_pred EEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 76 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~ 152 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQI 152 (285)
T ss_pred EEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEc
Confidence 99999999999987764221 2357899999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhcccc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~ 871 (929)
... .......||..|||||++.+..++.++||||+|++++++..+..++..... ...+.++..+... ..
T Consensus 153 ~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~---~~ 222 (285)
T cd05631 153 PEG-------ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKED---QE 222 (285)
T ss_pred CCC-------CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcc---cc
Confidence 321 112234789999999999999999999999999888776555444432221 1111111111110 00
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCC-----HHHHHH--HHHhhHHHHhhcc--CCCCCCC
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIG-----IREALR--RLKSSQEILLKQQ--VPNGKTK 928 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~ev~~--~L~~~~~~~~~~~--~p~~~~~ 928 (929)
. ....+...+.+++.+||+.||++||+ ++|+++ .++++........ .|+-.|.
T Consensus 223 ~----~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~ 284 (285)
T cd05631 223 E----YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEPPFCPD 284 (285)
T ss_pred c----CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHHHHhCcCCcCCCCC
Confidence 0 11112223334777999999999997 788876 3566544433232 4555554
No 52
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=1.5e-32 Score=300.55 Aligned_cols=222 Identities=21% Similarity=0.354 Sum_probs=166.6
Q ss_pred ceeecccCceeEEecccc--------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEE
Q 002376 666 ENLIGSGSFGSVLHNERT--------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 666 ~~~iG~G~~g~Vy~~~~~--------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV 725 (929)
..+||+|+|-+||||-+. ...++|..|+.+|+.++|||||+++.++.+... ..+.+|
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n---~~in~i 121 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDN---KTINFI 121 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCC---ceeeee
Confidence 467999999999999876 124689999999999999999999999987543 557899
Q ss_pred EEecCCCCcccccccccc--------ccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC-CCceEEecccccccccccc
Q 002376 726 YEFLSNGSLGDWIHGERK--------NELDITSALDYLHNDCEVPVVHSDLKPGNILLDE-EMTAKVGDFGLARFLLERV 796 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~~~~--------~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~-~~~~ki~DfGla~~~~~~~ 796 (929)
+|.|..|+|..|.++.++ ++.||++||.|||++ .|+|||||||..||+|+. .|.|||+|.|+|..+..
T Consensus 122 TEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~-- 198 (632)
T KOG0584|consen 122 TELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK-- 198 (632)
T ss_pred eecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc--
Confidence 999999999999986553 378999999999997 689999999999999974 57999999999997632
Q ss_pred CCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhh
Q 002376 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQ 876 (929)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 876 (929)
.....++|||.|||||++. ..|.+.+|||||||.+.||.+.++++..=.. ..++...-..+..+.. -..+.
T Consensus 199 ------s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n-~AQIYKKV~SGiKP~s-l~kV~ 269 (632)
T KOG0584|consen 199 ------SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTN-PAQIYKKVTSGIKPAA-LSKVK 269 (632)
T ss_pred ------cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCC-HHHHHHHHHcCCCHHH-hhccC
Confidence 2234479999999999986 7899999999999777666655554432111 1111111111100000 00000
Q ss_pred hhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 877 LHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 877 ~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
-++ +++++.+|+.. .++|||+.|++.
T Consensus 270 ----dPe-vr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 270 ----DPE-VREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred ----CHH-HHHHHHHHhcC-chhccCHHHHhh
Confidence 011 22377799999 999999999875
No 53
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.97 E-value=7.9e-33 Score=267.72 Aligned_cols=228 Identities=25% Similarity=0.282 Sum_probs=166.4
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++.|+.-+.||+|+|+.||++.... +.++..+|+++.+.++|||||++.+.+. ...+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~-----~~~~ 84 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-----EESF 84 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhc-----ccce
Confidence 4577778899999999999877652 3456778999999999999999999874 3456
Q ss_pred EEEEEEecCCCCccccccc--------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC---CCceEEecccccc
Q 002376 722 LALVYEFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE---EMTAKVGDFGLAR 790 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~--------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~---~~~~ki~DfGla~ 790 (929)
.|+|+|+|.||+|..-+-. ..+...||+.||.|+|.+ +|||||+||+|+++.. .--+|++|||+|.
T Consensus 85 ~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi 161 (355)
T KOG0033|consen 85 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAI 161 (355)
T ss_pred eEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEE
Confidence 8999999999999654321 123467999999999999 9999999999999953 2368999999999
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhccc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
.+. .......++|||+|||||+++..+|+..+|||+.|+++|-+..+..++..-. ...+......+.+...
T Consensus 162 ~l~-------~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~--~~rlye~I~~g~yd~~ 232 (355)
T KOG0033|consen 162 EVN-------DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--QHRLYEQIKAGAYDYP 232 (355)
T ss_pred EeC-------CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc--HHHHHHHHhccccCCC
Confidence 774 2234456799999999999999999999999999976654433332222111 1111111111111111
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
. +.++-+.+-.++++++|+..||++|.|+.|++.
T Consensus 233 ~----~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 233 S----PEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred C----cccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 2 122233344455777999999999999999763
No 54
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.97 E-value=1.4e-32 Score=309.59 Aligned_cols=236 Identities=18% Similarity=0.282 Sum_probs=169.4
Q ss_pred hhCCCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHcc-CCccccceeeecccCC
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSLD 715 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~ 715 (929)
..++|+..+.||+|+||.||+++.. ...+.+.+|+++++.+ +|||||+++++|....
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 3457888999999999999987531 0134578999999999 8999999999986543
Q ss_pred CCCcceEEEEEEecCCCCcccccccc------------------------------------------------------
Q 002376 716 SKNMEFLALVYEFLSNGSLGDWIHGE------------------------------------------------------ 741 (929)
Q Consensus 716 ~~~~~~~~lV~e~~~~gsL~~~l~~~------------------------------------------------------ 741 (929)
..++||||+++|+|.++++..
T Consensus 116 -----~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (374)
T cd05106 116 -----PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS 190 (374)
T ss_pred -----CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence 489999999999999887531
Q ss_pred ------------------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 742 ------------------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 742 ------------------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~ 267 (374)
T cd05106 191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN 267 (374)
T ss_pred ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc
Confidence 12346899999999998 999999999999999999999999999986532110
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTIQ 876 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 876 (929)
........++..|||||++.+..++.++||||+|++++++.. ...++..... +............ ..
T Consensus 268 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~------~~~~~~~~~~~~~--~~ 335 (374)
T cd05106 268 ----YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILV------NSKFYKMVKRGYQ--MS 335 (374)
T ss_pred ----eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccc------cHHHHHHHHcccC--cc
Confidence 011112235678999999999999999999999988777543 3332221111 1111111111000 00
Q ss_pred hhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhH
Q 002376 877 LHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQ 914 (929)
Q Consensus 877 ~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~ 914 (929)
.+...+.-+.+++.+||+.||++||++.||+++|+++.
T Consensus 336 ~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 336 RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 00111122334777999999999999999999999864
No 55
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.97 E-value=7.4e-33 Score=298.72 Aligned_cols=232 Identities=24% Similarity=0.316 Sum_probs=177.9
Q ss_pred CCCCceeecccCceeEEecccc---------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 662 NFSHENLIGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.....++||+|-||.||+|.+. .+.+.|..|..+|+.++|||||+++|+|.+..
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P----- 464 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQP----- 464 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccc-----
Confidence 3445688999999999998765 23578999999999999999999999996532
Q ss_pred eEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
.|+|||.++.|.|..|++..+ .++.||+.||+|||+. .+|||||.++|||+.....+|++|||++|.
T Consensus 465 -~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~ 540 (974)
T KOG4257|consen 465 -MWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRY 540 (974)
T ss_pred -eeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhh
Confidence 799999999999999998544 2367999999999998 899999999999999999999999999998
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
+... .....+...-...|||||.+--++++.++|||-||+.+||+.. .+.-|. ..+-...+...+..+
T Consensus 541 ~ed~-----~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~----lGvkPf--qgvkNsDVI~~iEnG- 608 (974)
T KOG4257|consen 541 LEDD-----AYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILS----LGVKPF--QGVKNSDVIGHIENG- 608 (974)
T ss_pred cccc-----chhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHH----hcCCcc--ccccccceEEEecCC-
Confidence 7422 1122223345678999999999999999999999988877421 222222 111111111111111
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQE 915 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~ 915 (929)
+.-+-.+.|.+.++. ++.+||+.||.+||++.|+...|.++.+
T Consensus 609 eRlP~P~nCPp~LYs-lmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 609 ERLPCPPNCPPALYS-LMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CCCCCCCCCChHHHH-HHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 111222356666665 9999999999999999999999999877
No 56
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=1.9e-32 Score=281.87 Aligned_cols=222 Identities=23% Similarity=0.289 Sum_probs=168.9
Q ss_pred CCCCceeecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 662 NFSHENLIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
+|++.+.+|+|.||+|-++... ++...+.+|+++|+.++||||++++.+| ++...+
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVF-----ENkdKI 128 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVF-----ENKDKI 128 (668)
T ss_pred HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhh-----cCCceE
Confidence 5777789999999999877653 2234577999999999999999999999 445569
Q ss_pred EEEEEecCCCCccccccc--------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~--------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
.+||||..+|.|+||+.+ .|++..||..|+.|+|.+ +++|||+|.+|||+|.++.+||+|||++..+..
T Consensus 129 vivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~ 205 (668)
T KOG0611|consen 129 VIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYAD 205 (668)
T ss_pred EEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhcc
Confidence 999999999999999974 346688999999999998 999999999999999999999999999987642
Q ss_pred ccCCCCCccccceeccccccccccccCCCCC-CCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERP-STAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
. ...+.+||++-|.+||++-|.+| +..+|-||+|+.+|.+..+.+++..... . .+...+......
T Consensus 206 ~-------kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh--k-----~lvrQIs~GaYr 271 (668)
T KOG0611|consen 206 K-------KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH--K-----RLVRQISRGAYR 271 (668)
T ss_pred c-------cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH--H-----HHHHHhhccccc
Confidence 2 34567899999999999999988 7899999999665554433333332222 1 111111111111
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
.+..+.... . ++++++..+|++|.|+.+|...
T Consensus 272 EP~~PSdA~---g-LIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 272 EPETPSDAS---G-LIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred CCCCCchHH---H-HHHHHHhcCcccchhHHHHhhh
Confidence 111111122 2 6669999999999999998743
No 57
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=6.9e-33 Score=268.53 Aligned_cols=224 Identities=20% Similarity=0.288 Sum_probs=175.1
Q ss_pred hhCCCCCceeecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
+.++|+.++.+|+|-||.||.|+.+ +...++.+|+++-+.++||||++++++|.+..
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~---- 95 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK---- 95 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccc----
Confidence 3467889999999999999999876 23567889999999999999999999996543
Q ss_pred ceEEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
.+|+++||.+.|+++..|.+.+ .+..|+|.|+.|+|.. +||||||||+|+|++..+..||+|||-+
T Consensus 96 -riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGws 171 (281)
T KOG0580|consen 96 -RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWS 171 (281)
T ss_pred -eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCce
Confidence 4899999999999999987332 2357899999999997 8999999999999999999999999987
Q ss_pred cccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcc
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTS 869 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 869 (929)
..-+ ....+..+||.-|.|||...+..++.++|+|+.|+..||+.++.-++..-.. +...+.....
T Consensus 172 V~~p--------~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~------~etYkrI~k~ 237 (281)
T KOG0580|consen 172 VHAP--------SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH------SETYKRIRKV 237 (281)
T ss_pred eecC--------CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh------HHHHHHHHHc
Confidence 5421 2234567999999999999999999999999999888876555444432221 1111111111
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
+...+..+..-+++++.+|+..+|.+|.+..|+++
T Consensus 238 ----~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 238 ----DLKFPSTISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred ----cccCCcccChhHHHHHHHHhccCccccccHHHHhh
Confidence 11111234445556888999999999999999875
No 58
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.97 E-value=5.3e-32 Score=300.59 Aligned_cols=174 Identities=23% Similarity=0.362 Sum_probs=144.9
Q ss_pred hCCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
.++|+..+.||+|+||.||+++... ..+.+.+|++++++++||||+++++++... ...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GEI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC-----CEE
Confidence 3688999999999999999987651 134688999999999999999999998543 348
Q ss_pred EEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
++||||+++|+|.+++.... .++.+++.||+|||+.+ +|+||||||+||++++++.+||+|||+++....
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 79 SICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (331)
T ss_pred EEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccc
Confidence 99999999999999986433 33678999999999852 699999999999999999999999999876532
Q ss_pred ccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
. ......||+.|+|||++.+..++.++||||+|++++++.++..++
T Consensus 157 ~--------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~ 202 (331)
T cd06649 157 S--------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPI 202 (331)
T ss_pred c--------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence 1 122347899999999999999999999999999888876555443
No 59
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.97 E-value=1.6e-31 Score=295.59 Aligned_cols=218 Identities=25% Similarity=0.295 Sum_probs=161.9
Q ss_pred eeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEE
Q 002376 667 NLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYE 727 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e 727 (929)
+.||+|+||.||+++... ....+.+|+.++++++||||+++++++.. ....|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-----~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQT-----HDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEc-----CCEEEEEEe
Confidence 469999999999887541 12356789999999999999999998854 345899999
Q ss_pred ecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCC
Q 002376 728 FLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799 (929)
Q Consensus 728 ~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~ 799 (929)
|+++|+|.+++...+ .++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~----- 147 (323)
T cd05571 76 YANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGIS----- 147 (323)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCccccc-----
Confidence 999999998886432 2357999999999998 999999999999999999999999999875321
Q ss_pred CCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhH
Q 002376 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHD 879 (929)
Q Consensus 800 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 879 (929)
........+||+.|||||++.+..++.++||||+|++++++.++..++..... .+.... ......... .
T Consensus 148 -~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~~~~----~~~~~~~~p----~ 216 (323)
T cd05571 148 -DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFEL----ILMEEIRFP----R 216 (323)
T ss_pred -CCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH--HHHHHH----HHcCCCCCC----C
Confidence 11122345799999999999999999999999999999987665544432211 111100 000111111 1
Q ss_pred HHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 002376 880 CLITIIGSVGLSCTTESPGGRI-----GIREALR 908 (929)
Q Consensus 880 ~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 908 (929)
.+..-+++++.+|++.||++|| ++.|+++
T Consensus 217 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 217 TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 1222233477799999999999 7888864
No 60
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.1e-32 Score=279.05 Aligned_cols=241 Identities=24% Similarity=0.307 Sum_probs=176.3
Q ss_pred hhCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
....|...+.||+|+||.|+.+..+. ..++-.+|++++++++|+||+.+.+++.......-.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 34456667899999999999887662 234566899999999999999999998774444556
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.+|+|+|+| ..+|.+.++..+ ....|+++||.|+|+. +|+|||+||+|++++.+...||+|||+||..
T Consensus 100 DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~~ 175 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARYL 175 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccceeec
Confidence 799999999 569999887544 3367999999999998 9999999999999999999999999999987
Q ss_pred ccccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhhhcC---------------Cc--h
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVESNL---------------PE--N 854 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~~~~---------------~~--~ 854 (929)
... ......+..+.|.+|+|||++... .|+.+.||||.||++.|+....-.+..- |+ .
T Consensus 176 ~~~----~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~ 251 (359)
T KOG0660|consen 176 DKF----FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEED 251 (359)
T ss_pred ccc----CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHH
Confidence 432 222344667889999999987654 5999999999999887765544332211 11 2
Q ss_pred hhhccChHHHHhhcccchhh-hh----hhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 855 VLQVLDPELRQLMTSNESQT-IQ----LHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 855 ~~~~~~~~l~~~~~~~~~~~-~~----~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
...+-....+..+...+... .+ ++..-+.++. +..+++..||.+|+|++|+++
T Consensus 252 l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~Aid-LlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 252 LQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAID-LLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHH-HHHHHhccCccccCCHHHHhc
Confidence 22222233333222211111 11 1112233454 788999999999999999875
No 61
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.97 E-value=2.4e-32 Score=293.79 Aligned_cols=231 Identities=19% Similarity=0.229 Sum_probs=167.3
Q ss_pred CCCCCceeecccCceeEEecccc--------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT--------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~--------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
++|+..+.||+|+||.||+|++. ...+.|.+|+.++++++||||+++++++... .
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~ 79 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRG-----N 79 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecC-----C
Confidence 46788899999999999998542 1134688999999999999999999998643 3
Q ss_pred eEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..++||||+++|+|.+++.... .++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+..
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~ 156 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQE 156 (266)
T ss_pred CcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccccc
Confidence 4899999999999999886421 2357899999999998 999999999999999999999999998764
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
.... .........++..|+|||++.+..++.++||||+|++++++.. ...++..... ..+.......
T Consensus 157 ~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~-------~~~~~~~~~~ 224 (266)
T cd05064 157 DKSE-----AIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG-------QDVIKAVEDG 224 (266)
T ss_pred cccc-----chhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH-------HHHHHHHHCC
Confidence 3111 0111112345678999999999999999999999988777422 3222221111 1111111110
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
.. ...+...+..+.+++.+||+.+|++||+++|+.+.|+++
T Consensus 225 ~~--~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 225 FR--LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CC--CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 00 000111222333477899999999999999999998764
No 62
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.97 E-value=2.7e-32 Score=265.45 Aligned_cols=244 Identities=19% Similarity=0.188 Sum_probs=178.0
Q ss_pred hhCCCCCceeecccCceeEEecccc----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
..++|.+.+.+|+|||.-||.++.. .+.+..++|++..++++||||+++++++...........
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 3468889999999999999987732 346678899999999999999999999987666567789
Q ss_pred EEEEEecCCCCccccccccc------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
|++++|...|+|.+.+.... .+..+|++||++||+. .+++.||||||.|||+.+.+.+++.|||.+.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 99999999999999886322 3367899999999997 4579999999999999999999999999988
Q ss_pred ccccccCCCCCcc---ccceeccccccccccccCCC---CCCCCCCCCCCcCCCCCcchhHHhhhcCCc---hhh-hccC
Q 002376 791 FLLERVDNQSSIS---STHVFMGSIGYVPPEYGLGE---RPSTAGDVPTSESFAGEFNIVKWVESNLPE---NVL-QVLD 860 (929)
Q Consensus 791 ~~~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~---~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~---~~~-~~~~ 860 (929)
...-......... ......-|..|+|||.+.-+ ..++++||||+||++|++....-++...-+ .+. .+..
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n 257 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQN 257 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeec
Confidence 6543222211111 11122458899999987543 479999999999887776544444332211 110 0111
Q ss_pred hHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 861 PELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 861 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
+.+. .+ ..... ++.+.+++..|++.||.+||++.|++..++++
T Consensus 258 ~q~s--~P----~~~~y----se~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 258 AQIS--IP----NSSRY----SEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred cccc--cC----CCCCc----cHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 1111 01 11112 23333366699999999999999999998875
No 63
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.97 E-value=3.8e-32 Score=292.16 Aligned_cols=233 Identities=21% Similarity=0.257 Sum_probs=171.3
Q ss_pred HhhCCCCCceeecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCC
Q 002376 658 RATGNFSHENLIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 658 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 718 (929)
...++|+....||+|+||.||.|+.+ ++.+....|-.+|...++|+||+++..| ++
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsF-----QD 212 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSF-----QD 212 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEe-----cC
Confidence 35678999999999999999998765 2355677899999999999999999998 44
Q ss_pred cceEEEEEEecCCCCccccccc--------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~--------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
.+++||||||++||++..+|.. .+.++.+.+.|++.+|+. |+|||||||+|+|||..|++|++|||++.
T Consensus 213 ~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~ 289 (550)
T KOG0605|consen 213 KEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLST 289 (550)
T ss_pred CCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccc
Confidence 5569999999999999988863 334566788899999998 99999999999999999999999999996
Q ss_pred cccccc-------------------CC-CCC---c------------------cccceeccccccccccccCCCCCCCCC
Q 002376 791 FLLERV-------------------DN-QSS---I------------------SSTHVFMGSIGYVPPEYGLGERPSTAG 829 (929)
Q Consensus 791 ~~~~~~-------------------~~-~~~---~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~ 829 (929)
-+.... .. ... . .....++|||-|||||++.+..|+..+
T Consensus 290 gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~c 369 (550)
T KOG0605|consen 290 GLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKEC 369 (550)
T ss_pred hhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccc
Confidence 432100 00 000 0 011245899999999999999999999
Q ss_pred CCCCCcCCCCCcchhHHhhhcC-Cc-hhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCC---HH
Q 002376 830 DVPTSESFAGEFNIVKWVESNL-PE-NVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIG---IR 904 (929)
Q Consensus 830 DV~s~g~~~~~~~~~~~~~~~~-~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs---~~ 904 (929)
|-||+||++||+.++.-++..- |. ....++..+..-..+.+... ..-..|++.+|+. ||++|-. +.
T Consensus 370 DwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~--------s~eA~DLI~rll~-d~~~RLG~~G~~ 440 (550)
T KOG0605|consen 370 DWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDL--------SDEAKDLITRLLC-DPENRLGSKGAE 440 (550)
T ss_pred cHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcc--------cHHHHHHHHHHhc-CHHHhcCcccHH
Confidence 9999999999986655444322 22 23333333222111221111 1222347779888 9999975 45
Q ss_pred HHH
Q 002376 905 EAL 907 (929)
Q Consensus 905 ev~ 907 (929)
||-
T Consensus 441 EIK 443 (550)
T KOG0605|consen 441 EIK 443 (550)
T ss_pred HHh
Confidence 543
No 64
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.97 E-value=9.5e-32 Score=296.77 Aligned_cols=235 Identities=20% Similarity=0.283 Sum_probs=172.4
Q ss_pred CCCCCceeecccCceeEEecccc---------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
.+|+..+.||+|+||.||+|.+. ...++|.+|+.+++.++||||++++|+|...
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~----- 81 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS----- 81 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-----
Confidence 36888999999999999998642 1135688899999999999999999998642
Q ss_pred ceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
..++|+||+++|+|.++++... .++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 82 -~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~ 157 (316)
T cd05108 82 -TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (316)
T ss_pred -CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccc
Confidence 2589999999999999887432 2367999999999998 99999999999999999999999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTS 869 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~ 869 (929)
.+..... ........++..|||||++.+..++.++||||+|+++|++.. ...++...+. ..+......
T Consensus 158 ~~~~~~~----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~-------~~~~~~~~~ 226 (316)
T cd05108 158 LLGADEK----EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-------SEISSILEK 226 (316)
T ss_pred cccCCCc----ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-------HHHHHHHhC
Confidence 7642211 011112234678999999999999999999999988777533 2222221111 111111111
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
.... +....+...+.+ ++.+||+.+|++||++.+++..+.++.+..
T Consensus 227 ~~~~-~~~~~~~~~~~~-li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 227 GERL-PQPPICTIDVYM-IMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred CCCC-CCCCCCCHHHHH-HHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 1000 001112233444 888999999999999999999999887653
No 65
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.97 E-value=5.8e-32 Score=299.87 Aligned_cols=220 Identities=22% Similarity=0.304 Sum_probs=165.7
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||+|+||.||+|+... ..+.+.+|++++++++||||+++++++... ..
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~ 92 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDE-----NR 92 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcC-----CE
Confidence 578889999999999999987652 124578899999999999999999998543 35
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.|+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 93 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 169 (329)
T PTZ00263 93 VYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP 169 (329)
T ss_pred EEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcC
Confidence 899999999999999886433 2356899999999998 99999999999999999999999999998653
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
.. .....||+.|||||++.+..++.++||||+|+++|++..+..++..... .+.. ........
T Consensus 170 ~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--~~~~----~~i~~~~~-- 232 (329)
T PTZ00263 170 DR---------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP--FRIY----EKILAGRL-- 232 (329)
T ss_pred CC---------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH--HHHH----HHHhcCCc--
Confidence 21 1235799999999999999999999999999888776554444322111 0100 00000000
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCC-----HHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIG-----IREAL 907 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~ev~ 907 (929)
..+..+...+++++.+||+.||++||+ ++|++
T Consensus 233 --~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll 269 (329)
T PTZ00263 233 --KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVK 269 (329)
T ss_pred --CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence 011112223344777999999999997 57766
No 66
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.3e-32 Score=297.08 Aligned_cols=221 Identities=25% Similarity=0.317 Sum_probs=172.7
Q ss_pred hhCCCCCceeecccCceeEEecccc-------------------CcHHHHHHHHHHHHcc-CCccccceeeecccCCCCC
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~ 718 (929)
..++|...++||+|.||+|+.+..+ .+.+..+.|.+++... +||.+++++.+| ++
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~f-----QT 440 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCF-----QT 440 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccc-----cc
Confidence 3468889999999999999988765 2356677888888877 599999999998 45
Q ss_pred cceEEEEEEecCCCCccccccc-------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHG-------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~-------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..++|+||||+.||++..+.+. .+.++..|+.||+|||++ +||+||||-+|||+|.+|.+||+|||++|.
T Consensus 441 ~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 441 KEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred CCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccc
Confidence 5669999999999997776652 345578999999999999 999999999999999999999999999985
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
.. .....+..++||+.|||||++.+..|+.++|=|++|+.+|||.+++-++..-. -.+++|..+.+ +.
T Consensus 518 ~m------~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd--Eee~FdsI~~d----~~ 585 (694)
T KOG0694|consen 518 GM------GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD--EEEVFDSIVND----EV 585 (694)
T ss_pred cC------CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHhcC----CC
Confidence 31 12335667899999999999999999999999999998888877665554332 33444444332 11
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGI 903 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 903 (929)
..+... -.+.+. |+.+.+..+|++|--+
T Consensus 586 ~yP~~l---s~ea~~-il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 586 RYPRFL---SKEAIA-IMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCCCcc---cHHHHH-HHHHHhccCcccccCC
Confidence 111111 223444 7779999999999866
No 67
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.97 E-value=9.7e-32 Score=298.71 Aligned_cols=237 Identities=22% Similarity=0.339 Sum_probs=170.6
Q ss_pred hCCCCCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHcc-CCccccceeeecccCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDS 716 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~ 716 (929)
.++|+..+.||+|+||.||+|+..+ ..+.+.+|+.++.++ +||||++++++|...+
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~- 84 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG- 84 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC-
Confidence 3478889999999999999885320 123567899999999 8999999999886433
Q ss_pred CCcceEEEEEEecCCCCccccccccc------------------------------------------------------
Q 002376 717 KNMEFLALVYEFLSNGSLGDWIHGER------------------------------------------------------ 742 (929)
Q Consensus 717 ~~~~~~~lV~e~~~~gsL~~~l~~~~------------------------------------------------------ 742 (929)
..+++||||+++|+|.+++....
T Consensus 85 ---~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (337)
T cd05054 85 ---GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE 161 (337)
T ss_pred ---CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence 34799999999999998875311
Q ss_pred ---------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCCccccce
Q 002376 743 ---------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHV 807 (929)
Q Consensus 743 ---------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~ 807 (929)
.++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++.+..... ......
T Consensus 162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~----~~~~~~ 234 (337)
T cd05054 162 GDELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD----YVRKGD 234 (337)
T ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcc----hhhccC
Confidence 1246899999999998 999999999999999999999999999987632211 011122
Q ss_pred eccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHH
Q 002376 808 FMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIG 886 (929)
Q Consensus 808 ~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 886 (929)
..++..|||||++.+..++.++||||+|++++++.. ...++.... .++.+............ ......++.+
T Consensus 235 ~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 307 (337)
T cd05054 235 ARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQ------IDEEFCRRLKEGTRMRA-PEYATPEIYS 307 (337)
T ss_pred CCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCC------ccHHHHHHHhccCCCCC-CccCCHHHHH
Confidence 356788999999999999999999999988877543 222221111 01111111111000000 0011223344
Q ss_pred HHhccccCCCCCCCCCHHHHHHHHHhhHH
Q 002376 887 SVGLSCTTESPGGRIGIREALRRLKSSQE 915 (929)
Q Consensus 887 ~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~ 915 (929)
++.+||+.+|++||++.|+++.|+++.+
T Consensus 308 -l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 308 -IMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred -HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 8889999999999999999999998765
No 68
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.97 E-value=9.5e-33 Score=270.98 Aligned_cols=238 Identities=24% Similarity=0.299 Sum_probs=177.8
Q ss_pred HHhhCCCCCceeecccCceeEEeccccCc------------------------HHHHHHHHHHHHcc-CCccccceeeec
Q 002376 657 RRATGNFSHENLIGSGSFGSVLHNERTGS------------------------WKSFIAECETLRNV-RHRNLVKLITSC 711 (929)
Q Consensus 657 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~------------------------~~~~~~E~~~l~~l-~Hpniv~l~~~~ 711 (929)
+...+.|...+.+|.|..+.|-++..+.+ .++-.+|+.+++++ .||+|+++.++|
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 34455677778899998888866544311 23455799999998 599999999999
Q ss_pred ccCCCCCcceEEEEEEecCCCCcccccc--------ccccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEE
Q 002376 712 SSLDSKNMEFLALVYEFLSNGSLGDWIH--------GERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKV 783 (929)
Q Consensus 712 ~~~~~~~~~~~~lV~e~~~~gsL~~~l~--------~~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki 783 (929)
. ...++++|+|.|+.|.|+|++. +.|.+..|+..|++|||.. .|||||+||+|||+|++.++||
T Consensus 93 e-----s~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~i 164 (411)
T KOG0599|consen 93 E-----SDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKI 164 (411)
T ss_pred c-----CcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEE
Confidence 4 4456899999999999999996 3567788999999999998 8999999999999999999999
Q ss_pred eccccccccccccCCCCCccccceeccccccccccccCC------CCCCCCCCCCCCcCCCCCcchhHHhhhcCCchh-h
Q 002376 784 GDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG------ERPSTAGDVPTSESFAGEFNIVKWVESNLPENV-L 856 (929)
Q Consensus 784 ~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~-~ 856 (929)
+|||+|..+.++ ......+|||+|.|||.+.. ..|+..+|.|+.|+++|.+ ..+.-|.+- .
T Consensus 165 sDFGFa~~l~~G-------ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTL-----LaGcpPFwHRk 232 (411)
T KOG0599|consen 165 SDFGFACQLEPG-------EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTL-----LAGCPPFWHRK 232 (411)
T ss_pred eccceeeccCCc-------hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHH-----HcCCCchhHHH
Confidence 999999987533 33456799999999998763 2489999999999766543 333334311 1
Q ss_pred hccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHHhhHHH
Q 002376 857 QVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR--RLKSSQEI 916 (929)
Q Consensus 857 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~--~L~~~~~~ 916 (929)
+++ .++-.+....+.+.+.|..++.-+++++.+|++.||.+|.|++|+++ .+..+...
T Consensus 233 Qml--MLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~~ 292 (411)
T KOG0599|consen 233 QML--MLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQQ 292 (411)
T ss_pred HHH--HHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHHh
Confidence 111 12222222333344445556667777899999999999999999985 34444443
No 69
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.97 E-value=2.2e-31 Score=295.84 Aligned_cols=223 Identities=22% Similarity=0.238 Sum_probs=167.4
Q ss_pred hCCCCCceeecccCceeEEeccccC--------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG--------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~--------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
.++|+..+.||+|+||.||+|.+.. ..+.+.+|+++++.++|||||++++++.+.
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~----- 103 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE----- 103 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC-----
Confidence 4578889999999999999986431 124567899999999999999999998543
Q ss_pred ceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
...|+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 104 ~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~ 180 (340)
T PTZ00426 104 SYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKV 180 (340)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCee
Confidence 45899999999999999986433 3367899999999998 999999999999999999999999999986
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
... .....+||+.|||||++.+..++.++||||+|+++|++.++..++...... ... ..+. ....
T Consensus 181 ~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--~~~-~~i~---~~~~ 245 (340)
T PTZ00426 181 VDT---------RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL--LIY-QKIL---EGII 245 (340)
T ss_pred cCC---------CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH--HHH-HHHh---cCCC
Confidence 521 122457999999999999989999999999999888876655444322110 000 0111 1111
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCC-----CHHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRI-----GIREALRR 909 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~~ 909 (929)
..... +..-+++++.+|++.||++|+ +++|+++.
T Consensus 246 ~~p~~----~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 246 YFPKF----LDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred CCCCC----CCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 11111 122233477799999999995 78887653
No 70
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.97 E-value=1.9e-31 Score=296.58 Aligned_cols=228 Identities=20% Similarity=0.220 Sum_probs=168.8
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||+|+||.||+|+... ..+.+.+|++++..++||||+++++++.. ...
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-----~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQD-----DEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEc-----CCE
Confidence 468889999999999999987641 13457789999999999999999999854 345
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.|+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~ 152 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIV 152 (333)
T ss_pred EEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCcccc
Confidence 899999999999999986432 2357899999999998 99999999999999999999999999998542
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhh--cccc
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLM--TSNE 871 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~ 871 (929)
. ......||+.|+|||++.+..++.++||||+|+++|++.....++..... .+... .+.... ....
T Consensus 153 ~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~--~~~~~-~i~~~~~~~~~~ 220 (333)
T cd05600 153 T---------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP--NETWE-NLKYWKETLQRP 220 (333)
T ss_pred c---------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCH--HHHHH-HHHhccccccCC
Confidence 1 12345799999999999999999999999999999987665544432221 11100 011000 0000
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
...... ..+...+.+++.+|+..+|++||+++|+++.
T Consensus 221 ~~~~~~-~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 221 VYDDPR-FNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCCccc-cccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 000000 0111222337779999999999999999864
No 71
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.97 E-value=3.3e-31 Score=299.62 Aligned_cols=238 Identities=20% Similarity=0.303 Sum_probs=171.1
Q ss_pred HhhCCCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHccC-CccccceeeecccC
Q 002376 658 RATGNFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNVR-HRNLVKLITSCSSL 714 (929)
Q Consensus 658 ~~~~~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~ 714 (929)
...++|...++||+|+||.||+|+.. ...+.|.+|+++++++. |||||+++++|.+.
T Consensus 34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 34568888899999999999987631 11356889999999996 99999999999543
Q ss_pred CCCCcceEEEEEEecCCCCccccccccc----------------------------------------------------
Q 002376 715 DSKNMEFLALVYEFLSNGSLGDWIHGER---------------------------------------------------- 742 (929)
Q Consensus 715 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------------------------------------------- 742 (929)
...|+|||||++|+|.++++..+
T Consensus 114 -----~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (400)
T cd05105 114 -----GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQY 188 (400)
T ss_pred -----CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccccc
Confidence 34899999999999998875321
Q ss_pred ----------------------------------------------------cccccHHHHHHHhhhCCCCCEEecCCCC
Q 002376 743 ----------------------------------------------------KNELDITSALDYLHNDCEVPVVHSDLKP 770 (929)
Q Consensus 743 ----------------------------------------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~ 770 (929)
.++.|++.|++|||+. +|+||||||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp 265 (400)
T cd05105 189 VPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAA 265 (400)
T ss_pred chhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCh
Confidence 1245799999999998 999999999
Q ss_pred CCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhc
Q 002376 771 GNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESN 850 (929)
Q Consensus 771 ~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~ 850 (929)
+||++++++.+||+|||+++....... ........+++.|||||++.+..++.++||||+|++++++.. .+.
T Consensus 266 ~Nill~~~~~~kL~DfGla~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt----~g~ 337 (400)
T cd05105 266 RNVLLAQGKIVKICDFGLARDIMHDSN----YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFS----LGG 337 (400)
T ss_pred HhEEEeCCCEEEEEeCCcceecccccc----ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHH----CCC
Confidence 999999999999999999986532111 111223357789999999999999999999999988777532 122
Q ss_pred CCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhH
Q 002376 851 LPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQ 914 (929)
Q Consensus 851 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~ 914 (929)
.|... ...+............ ..........+.+++.+||+.||++||++.++.++|+++.
T Consensus 338 ~P~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 338 TPYPG-MIVDSTFYNKIKSGYR--MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred CCCcc-cchhHHHHHHHhcCCC--CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 22100 0011111111111100 0011112223334888999999999999999999999764
No 72
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.97 E-value=1.1e-31 Score=295.53 Aligned_cols=215 Identities=27% Similarity=0.303 Sum_probs=158.0
Q ss_pred ecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEec
Q 002376 669 IGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFL 729 (929)
Q Consensus 669 iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~ 729 (929)
||+|+||.||+++... ..+.+.+|+.++++++||||+++++++.. ....|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQS-----PEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEec-----CCeEEEEEcCC
Confidence 6999999999987641 12456789999999999999999998854 33589999999
Q ss_pred CCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCC
Q 002376 730 SNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSS 801 (929)
Q Consensus 730 ~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 801 (929)
++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 76 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~------ 146 (312)
T cd05585 76 NGGELFHHLQREGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD------ 146 (312)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccC------
Confidence 9999999886432 2356899999999998 9999999999999999999999999999853211
Q ss_pred ccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHHH
Q 002376 802 ISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCL 881 (929)
Q Consensus 802 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 881 (929)
.......+||+.|||||++.+..++.++||||+|++++++..+..++.... ..+.... ...... ..+..+
T Consensus 147 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~--~~~~~~~----~~~~~~----~~~~~~ 216 (312)
T cd05585 147 DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN--VNEMYRK----ILQEPL----RFPDGF 216 (312)
T ss_pred CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC--HHHHHHH----HHcCCC----CCCCcC
Confidence 111234579999999999999999999999999988777655444432211 1111111 111111 111112
Q ss_pred HHHHHHHhccccCCCCCCCCC---HHHHH
Q 002376 882 ITIIGSVGLSCTTESPGGRIG---IREAL 907 (929)
Q Consensus 882 ~~~~~~l~~~Cl~~dP~~RPs---~~ev~ 907 (929)
...+++++.+||+.||++||+ +.|++
T Consensus 217 ~~~~~~li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 217 DRDAKDLLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred CHHHHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence 233344777999999999985 45554
No 73
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.97 E-value=1.1e-31 Score=292.49 Aligned_cols=222 Identities=23% Similarity=0.283 Sum_probs=166.4
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||+|+||.||++.... ..+.+.+|++++++++||||+++++++.+ ...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD-----QRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc-----CCe
Confidence 468889999999999999987651 12357789999999999999999998754 345
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.++||||+++|+|.++++..+ .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~ 152 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLR 152 (291)
T ss_pred EEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhcc
Confidence 899999999999999886433 2367899999999998 99999999999999999999999999998652
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
.. .....||+.|+|||++.+..++.++||||+|+++|++.....++..... .+........ ..
T Consensus 153 ~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~--~~~~~~i~~~----~~-- 215 (291)
T cd05612 153 DR---------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP--FGIYEKILAG----KL-- 215 (291)
T ss_pred CC---------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhC----Cc--
Confidence 11 1234789999999999999999999999999888876555444322111 1111111110 00
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCC-----HHHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIG-----IREALRR 909 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~ev~~~ 909 (929)
..+......+++++.+|++.||.+||+ ++|+++.
T Consensus 216 --~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 216 --EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred --CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 011111223344777999999999995 7777643
No 74
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.97 E-value=1.3e-31 Score=290.82 Aligned_cols=232 Identities=24% Similarity=0.374 Sum_probs=168.2
Q ss_pred CCCCCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCC
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 718 (929)
++|+..+.||+|+||.||+|.... ..++|.+|++++++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~---- 80 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE---- 80 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC----
Confidence 367778999999999999876421 134688999999999999999999998543
Q ss_pred cceEEEEEEecCCCCccccccccc------------------------cccccHHHHHHHhhhCCCCCEEecCCCCCCee
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER------------------------KNELDITSALDYLHNDCEVPVVHSDLKPGNIL 774 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~------------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NIL 774 (929)
...+++|||+++|+|.+++.... .++.|++.||+|||+. +++||||||+||+
T Consensus 81 -~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil 156 (283)
T cd05048 81 -QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCL 156 (283)
T ss_pred -CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEE
Confidence 33799999999999999886321 2467899999999998 9999999999999
Q ss_pred ecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCc
Q 002376 775 LDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPE 853 (929)
Q Consensus 775 l~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~ 853 (929)
+++++.+||+|||+++...... .........+++.|||||++.+..++.++||||+|++++++.. ...++.....
T Consensus 157 ~~~~~~~~L~dfg~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~ 232 (283)
T cd05048 157 VGEGLTVKISDFGLSRDIYSAD----YYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN 232 (283)
T ss_pred EcCCCcEEECCCcceeeccccc----cccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 9999999999999998653211 1111223356889999999998999999999999988877543 2212111111
Q ss_pred hhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 854 NVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 854 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
. ++........... ....+..++ .+++.+||+.||++||+++||+++|+.+
T Consensus 233 --~-----~~~~~i~~~~~~~-~~~~~~~~~-~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 233 --Q-----EVIEMIRSRQLLP-CPEDCPARV-YALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred --H-----HHHHHHHcCCcCC-CcccCCHHH-HHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 1 1111111111000 001112223 3377799999999999999999999863
No 75
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.97 E-value=1.9e-31 Score=288.82 Aligned_cols=234 Identities=22% Similarity=0.263 Sum_probs=169.0
Q ss_pred CCCCCceeecccCceeEEeccccC---------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG---------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~---------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
++|+..+.||+|+||+||+|.+.. ..+++..|+..+++++||||+++++++..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~------ 80 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG------ 80 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC------
Confidence 356778899999999999987521 12456678888999999999999998742
Q ss_pred ceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
...++|+||+++|+|.++++... .++.||+.||+|||+. +++||||||+||++++++.+||+|||+++
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~ 157 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVAD 157 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccce
Confidence 12689999999999999986432 2467999999999998 89999999999999999999999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTS 869 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~ 869 (929)
....... ........|+..|+|||++.++.++.++||||+|+++|++.. ...++..... .........
T Consensus 158 ~~~~~~~----~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-------~~~~~~~~~ 226 (279)
T cd05111 158 LLYPDDK----KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP-------HEVPDLLEK 226 (279)
T ss_pred eccCCCc----ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH-------HHHHHHHHC
Confidence 6532211 111223457789999999999999999999999988777543 2222211110 011111111
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
..... ....+...+.. ++.+||..||++|||+.|+++.|+.+.+.
T Consensus 227 ~~~~~-~~~~~~~~~~~-li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 227 GERLA-QPQICTIDVYM-VMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred CCcCC-CCCCCCHHHHH-HHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 11000 00011223333 77899999999999999999999987753
No 76
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.97 E-value=1.7e-31 Score=290.05 Aligned_cols=240 Identities=23% Similarity=0.264 Sum_probs=170.0
Q ss_pred CCceeecccCceeEEecccc---------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 664 SHENLIGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 664 ~~~~~iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
+..+.||+|+||+||++... ...+.|.+|++++++++||||+++++++...+ ....
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~~~~ 83 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQG---GKGL 83 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---CceE
Confidence 77899999999999764311 12456889999999999999999999886422 2357
Q ss_pred EEEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
++||||+++|+|.+++.... .++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.+...
T Consensus 84 ~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 160 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 160 (283)
T ss_pred EEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccCCc
Confidence 99999999999999886432 3467899999999998 9999999999999999999999999999866422
Q ss_pred cCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccCh--------HHHHhh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDP--------ELRQLM 867 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~~ 867 (929)
... ........++..|+|||++.+..++.++||||+|++++++.+...++...+..+.+..+. .+....
T Consensus 161 ~~~---~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05080 161 HEY---YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELL 237 (283)
T ss_pred chh---hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhh
Confidence 110 000112245677999999998899999999999988877655443332222111111111 111111
Q ss_pred cccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhH
Q 002376 868 TSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQ 914 (929)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~ 914 (929)
.... ....+...+..+.+++.+||+.+|++|||+++++++|+++.
T Consensus 238 ~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 238 ERGM--RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hcCC--CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 0000 00001111223334888999999999999999999999875
No 77
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.97 E-value=2.2e-31 Score=290.85 Aligned_cols=237 Identities=22% Similarity=0.285 Sum_probs=166.5
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------------------cHHHHHHHHHHHHccCCccccceee
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------------------SWKSFIAECETLRNVRHRNLVKLIT 709 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------------------~~~~~~~E~~~l~~l~Hpniv~l~~ 709 (929)
++|+..+.||+|+||.||+++..+ ..+.|.+|++++++++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 478888999999999999875421 1246889999999999999999999
Q ss_pred ecccCCCCCcceEEEEEEecCCCCccccccccc--------------------cccccHHHHHHHhhhCCCCCEEecCCC
Q 002376 710 SCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER--------------------KNELDITSALDYLHNDCEVPVVHSDLK 769 (929)
Q Consensus 710 ~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk 769 (929)
++...+ ..++||||+++++|.+++.... .++.+++.|++|||+. +++|||||
T Consensus 85 ~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlk 156 (295)
T cd05097 85 VCVSDD-----PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLA 156 (295)
T ss_pred EEcCCC-----ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccC
Confidence 986433 4799999999999999875321 1356899999999998 99999999
Q ss_pred CCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch--hHHh
Q 002376 770 PGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI--VKWV 847 (929)
Q Consensus 770 ~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~--~~~~ 847 (929)
|+||++++++.+||+|||+++...... .........++..|+|||++.++.++.++||||+|++++++.. ..++
T Consensus 157 p~Nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p 232 (295)
T cd05097 157 TRNCLVGNHYTIKIADFGMSRNLYSGD----YYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQP 232 (295)
T ss_pred hhhEEEcCCCcEEecccccccccccCc----ceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999997653211 0111122345778999999999999999999999988777532 1122
Q ss_pred hhcCCchhhhccChHHHHhhcc-cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 848 ESNLPENVLQVLDPELRQLMTS-NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 848 ~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
+..... .+.+... ...... ............+.-+.+++.+||+.||++||+|++|++.|++
T Consensus 233 ~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 233 YSLLSD--EQVIENT-GEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred CcccCh--HHHHHHH-HHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 211111 1111100 000000 0000000000111223348889999999999999999999864
No 78
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.97 E-value=3.6e-31 Score=289.35 Aligned_cols=237 Identities=22% Similarity=0.284 Sum_probs=168.0
Q ss_pred CCCCCceeecccCceeEEecccc---------------------------------CcHHHHHHHHHHHHccCCccccce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT---------------------------------GSWKSFIAECETLRNVRHRNLVKL 707 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~---------------------------------~~~~~~~~E~~~l~~l~Hpniv~l 707 (929)
++|+..+.||+|+||.||+++.. ...++|.+|+++++.++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46888999999999999987421 113568899999999999999999
Q ss_pred eeecccCCCCCcceEEEEEEecCCCCcccccccc-------------------ccccccHHHHHHHhhhCCCCCEEecCC
Q 002376 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE-------------------RKNELDITSALDYLHNDCEVPVVHSDL 768 (929)
Q Consensus 708 ~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~-------------------~~~~~~ia~aL~yLH~~~~~~iiHrDl 768 (929)
++++...+ ..++||||+++|+|.+++... ..++.|++.|++|||+. +++||||
T Consensus 85 ~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl 156 (296)
T cd05095 85 LAVCITSD-----PLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDL 156 (296)
T ss_pred EEEEecCC-----ccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccC
Confidence 99985533 379999999999999988642 12356899999999998 9999999
Q ss_pred CCCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch--hHH
Q 002376 769 KPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI--VKW 846 (929)
Q Consensus 769 k~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~--~~~ 846 (929)
||+||++++++.+|++|||+++.+..... ........+++.|+|||+..++.++.++||||+|+++|++.. ..+
T Consensus 157 kp~Nili~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~ 232 (296)
T cd05095 157 ATRNCLVGKNYTIKIADFGMSRNLYSGDY----YRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQ 232 (296)
T ss_pred ChheEEEcCCCCEEeccCcccccccCCcc----eeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCC
Confidence 99999999999999999999986532110 011112244678999999888899999999999998888653 223
Q ss_pred hhhcCCchhhhccChHHHHhhccc-chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 847 VESNLPENVLQVLDPELRQLMTSN-ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 847 ~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
++..... .+.+.. ........ ..............+.+++.+||+.||++||+|.||++.|++
T Consensus 233 p~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 233 PYSQLSD--EQVIEN-TGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred CccccCh--HHHHHH-HHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 3322221 111110 00000000 000000001111233348889999999999999999999874
No 79
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.2e-32 Score=292.17 Aligned_cols=217 Identities=27% Similarity=0.347 Sum_probs=157.3
Q ss_pred CCCceeecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 663 FSHENLIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
|.-.+.||.|+||.||-+++. ..+.++.+|+..|++++|||+|.+.|+|.... ..|
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~-----TaW 102 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH-----TAW 102 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccc-----hHH
Confidence 334467999999999988765 23568899999999999999999999986433 279
Q ss_pred EEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
+||||| -|+-.|.+.-.+ .+..+++.||+|||+. +.||||||+.|||+.+.|.||++|||.|..+.
T Consensus 103 LVMEYC-lGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~- 177 (948)
T KOG0577|consen 103 LVMEYC-LGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMA- 177 (948)
T ss_pred HHHHHH-hccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcC-
Confidence 999999 568777775333 2356788999999998 89999999999999999999999999987652
Q ss_pred ccCCCCCccccceeccccccccccccC---CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGL---GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
....++|||.|||||++. .+.|+-|+||||+|++..|+.-..-+...... + ..+..+...+.
T Consensus 178 ---------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA-M-----SALYHIAQNes 242 (948)
T KOG0577|consen 178 ---------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-M-----SALYHIAQNES 242 (948)
T ss_pred ---------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH-H-----HHHHHHHhcCC
Confidence 235589999999999875 56799999999999877664222111111100 0 01111100000
Q ss_pred --hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 872 --SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 872 --~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
-+...+.+.+.. ++..|++.=|.+|||.++++.
T Consensus 243 PtLqs~eWS~~F~~----Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 243 PTLQSNEWSDYFRN----FVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred CCCCCchhHHHHHH----HHHHHHhhCcccCCcHHHHhh
Confidence 011123344444 555999999999999887653
No 80
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.97 E-value=3.1e-31 Score=295.79 Aligned_cols=179 Identities=25% Similarity=0.339 Sum_probs=142.2
Q ss_pred CCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+|+..+.||+|+||.||+|+... ...++.+|++++++++||||+++++++...........|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 47788999999999999987541 124578999999999999999999998655433344689
Q ss_pred EEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
+||||++ ++|.+++.... .++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 81 lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 81 VVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 9999995 68988876332 3467999999999998 9999999999999999999999999999864321
Q ss_pred cCCCCCccccceeccccccccccccCC--CCCCCCCCCCCCcCCCCCcchhHHh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLG--ERPSTAGDVPTSESFAGEFNIVKWV 847 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~s~g~~~~~~~~~~~~ 847 (929)
.. .........||+.|+|||++.+ ..++.++||||+|++++++.++..+
T Consensus 157 ~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~p 207 (338)
T cd07859 157 TP---TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPL 207 (338)
T ss_pred cC---ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCC
Confidence 11 1111234579999999999876 5789999999999988887655433
No 81
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.97 E-value=2.7e-31 Score=294.93 Aligned_cols=173 Identities=23% Similarity=0.366 Sum_probs=143.4
Q ss_pred hCCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
.++|+..++||+|+||.||++.+.. ..+.+.+|++++++++||||++++++|.+. .+.
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 78 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GEI 78 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC-----CEE
Confidence 3688999999999999999987641 124688999999999999999999998653 358
Q ss_pred EEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
++||||+++|+|.++++... .++.+++.|++|||+.. +|+||||||+||++++++.+||+|||+++.+..
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 79 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence 99999999999999986432 23568999999999742 699999999999999999999999999976532
Q ss_pred ccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWV 847 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~ 847 (929)
. ......||..|+|||++.+..++.++||||+|++++++.....+
T Consensus 157 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p 201 (333)
T cd06650 157 S--------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYP 201 (333)
T ss_pred h--------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 1 11234689999999999998999999999999888876555443
No 82
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.97 E-value=1.2e-31 Score=290.26 Aligned_cols=233 Identities=21% Similarity=0.269 Sum_probs=168.4
Q ss_pred hhCCCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHccCCccccceeeecccCCC
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDS 716 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~ 716 (929)
++++|+..+.||+|+||.||+|.+. ....+|.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~-- 81 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG-- 81 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC--
Confidence 4568999999999999999986532 0124588999999999999999999998543
Q ss_pred CCcceEEEEEEecCCCCccccccccc------------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC
Q 002376 717 KNMEFLALVYEFLSNGSLGDWIHGER------------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE 778 (929)
Q Consensus 717 ~~~~~~~lV~e~~~~gsL~~~l~~~~------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~ 778 (929)
...++||||+++|+|.++++..+ .++.|++.|++|||+. +++||||||+||+++++
T Consensus 82 ---~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~ 155 (277)
T cd05062 82 ---QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 155 (277)
T ss_pred ---CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCC
Confidence 34799999999999999886421 1245899999999997 99999999999999999
Q ss_pred CceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhh
Q 002376 779 MTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQ 857 (929)
Q Consensus 779 ~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~ 857 (929)
+.+|++|||+++....... ........+++.|||||++.+..++.++||||+|++++++.. ...++..... .+
T Consensus 156 ~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~--~~ 229 (277)
T cd05062 156 FTVKIGDFGMTRDIYETDY----YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN--EQ 229 (277)
T ss_pred CCEEECCCCCccccCCcce----eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HH
Confidence 9999999999986532111 001112345788999999999899999999999988877643 2333222211 11
Q ss_pred ccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 858 VLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 858 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
..+........ . ........+++++.+|++.+|++||++.|+++.|++
T Consensus 230 ~~~~~~~~~~~---~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 230 VLRFVMEGGLL---D----KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHHHHcCCcC---C----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 11000000000 0 001112223348889999999999999999998864
No 83
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.97 E-value=2.7e-31 Score=289.46 Aligned_cols=237 Identities=27% Similarity=0.359 Sum_probs=165.5
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHcc---CCccccceeeecccCCCCC
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNV---RHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l---~Hpniv~l~~~~~~~~~~~ 718 (929)
++|+..+.||+|+||+||+|+... ....+.+|+.+++++ +||||++++++|.......
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 368889999999999999986521 123566788877766 6999999999986443333
Q ss_pred cceEEEEEEecCCCCcccccccc----------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGE----------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~----------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGl 788 (929)
....++||||++ ++|.+++... ..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccccc
Confidence 456899999996 6888887532 13467999999999998 999999999999999999999999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhccCh-----
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQVLDP----- 861 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~~~~----- 861 (929)
++..... .......||+.|+|||++.+..++.++||||+|++++++....-++....+ ...++++.
T Consensus 157 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~ 229 (290)
T cd07862 157 ARIYSFQ-------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 229 (290)
T ss_pred eEeccCC-------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCC
Confidence 9865321 122345789999999999988999999999999888876544333322211 11111100
Q ss_pred --HHH-------Hhhcccchhhh-hhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 862 --ELR-------QLMTSNESQTI-QLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 862 --~l~-------~~~~~~~~~~~-~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
... ........... .....+...+++++.+|++.||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 230 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 000 00000000000 000112334455888999999999999999974
No 84
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.97 E-value=1.3e-30 Score=288.65 Aligned_cols=217 Identities=26% Similarity=0.309 Sum_probs=160.7
Q ss_pred eeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEE
Q 002376 667 NLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYE 727 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e 727 (929)
+.||+|+||.||+++... ....+.+|+++++.++||||+++++++.. ....|+|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~-----~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-----HDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc-----CCEEEEEEe
Confidence 469999999999886531 12456789999999999999999998854 335899999
Q ss_pred ecCCCCccccccccc--------cccccHHHHHHHhhh-CCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 728 FLSNGSLGDWIHGER--------KNELDITSALDYLHN-DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 728 ~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~-~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
|+++|+|.+++...+ .++.|++.||+|||+ . +|+||||||+|||+++++.+||+|||+++.....
T Consensus 76 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~--- 149 (325)
T cd05594 76 YANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--- 149 (325)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCC---
Confidence 999999998876432 236789999999997 5 8999999999999999999999999998753211
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhcccchhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMTSNESQTIQL 877 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~ 877 (929)
........||+.|||||++.+..++.++||||+|++++++.++..++..... ...+.+. ..... .
T Consensus 150 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~-------~~~~~----~ 215 (325)
T cd05594 150 ---GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL-------MEEIR----F 215 (325)
T ss_pred ---CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHh-------cCCCC----C
Confidence 1112335799999999999999999999999999999998766555432221 1111100 00000 0
Q ss_pred hHHHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 002376 878 HDCLITIIGSVGLSCTTESPGGRI-----GIREALR 908 (929)
Q Consensus 878 ~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 908 (929)
+.....-+.+++.+|++.||++|+ +++++++
T Consensus 216 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 216 PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 011112233377799999999996 8888874
No 85
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.97 E-value=8.9e-31 Score=290.12 Aligned_cols=219 Identities=26% Similarity=0.323 Sum_probs=160.9
Q ss_pred eeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEE
Q 002376 667 NLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYE 727 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e 727 (929)
+.||+|+||.||+++... ..+.+.+|+++++.++||||+++++++.. ....++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQT-----KDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-----CCEEEEEEe
Confidence 469999999999887541 23467789999999999999999998854 345899999
Q ss_pred ecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCC
Q 002376 728 FLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799 (929)
Q Consensus 728 ~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~ 799 (929)
|+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 76 y~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~---- 148 (328)
T cd05593 76 YVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD---- 148 (328)
T ss_pred CCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCc----
Confidence 999999988875432 3467899999999998 9999999999999999999999999998753211
Q ss_pred CCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhH
Q 002376 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHD 879 (929)
Q Consensus 800 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 879 (929)
.......+||+.|||||++.+..++.++||||+|++++++..+..++..... .+... ............
T Consensus 149 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~--~~~~~----~~~~~~~~~p~~--- 217 (328)
T cd05593 149 --AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFE----LILMEDIKFPRT--- 217 (328)
T ss_pred --ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH--HHHHH----HhccCCccCCCC---
Confidence 1112345799999999999999999999999999888876655444322111 11110 000011111111
Q ss_pred HHHHHHHHHhccccCCCCCCCC-----CHHHHHHH
Q 002376 880 CLITIIGSVGLSCTTESPGGRI-----GIREALRR 909 (929)
Q Consensus 880 ~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~~ 909 (929)
+..-+.+++.+|++.||++|| ++.|+++.
T Consensus 218 -~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 218 -LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred -CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 122223377799999999997 88888753
No 86
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.7e-31 Score=295.12 Aligned_cols=234 Identities=22% Similarity=0.283 Sum_probs=182.1
Q ss_pred CCceeecccCceeEEecccc---------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 664 SHENLIGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 664 ~~~~~iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
+..++||+|+||.||||.+- +..+++..|+-+|.+++|||+++++|+|.... +
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~------~ 772 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST------L 772 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch------H
Confidence 34579999999999999764 23568999999999999999999999996533 6
Q ss_pred EEEEEecCCCCcccccccccc---------ccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGERK---------NELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~~---------~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.||++||+.|.|.+|++..|. +..|||+||.|||.+ ++|||||.++|||+..-..+||.|||+|+.+.
T Consensus 773 qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~ 849 (1177)
T KOG1025|consen 773 QLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLA 849 (1177)
T ss_pred HHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence 899999999999999986553 257999999999998 99999999999999999999999999999875
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
..... .......-.+.|||-|.+..++|+.++||||||++.||+.+ ++.-|. ..+-..++.+.+...+ .
T Consensus 850 ~d~~e----y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmT----FGa~Py--~gi~~~eI~dlle~ge-R 918 (1177)
T KOG1025|consen 850 PDEKE----YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMT----FGAKPY--DGIPAEEIPDLLEKGE-R 918 (1177)
T ss_pred ccccc----ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHh----cCCCcc--CCCCHHHhhHHHhccc-c
Confidence 43221 11222344678999999999999999999999998888532 233222 1111222333222222 1
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
-.+.+-|...+.. ++.+||..|++.||+++++...+.++.+..+
T Consensus 919 LsqPpiCtiDVy~-~mvkCwmid~~~rp~fkel~~~fs~~ardpq 962 (1177)
T KOG1025|consen 919 LSQPPICTIDVYM-VMVKCWMIDADSRPTFKELAEEFSRMARDPQ 962 (1177)
T ss_pred CCCCCCccHHHHH-HHHHHhccCcccCccHHHHHHHHHHHhcCcc
Confidence 2333456677777 9999999999999999999999999877644
No 87
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.97 E-value=3.5e-31 Score=287.66 Aligned_cols=242 Identities=25% Similarity=0.322 Sum_probs=169.8
Q ss_pred CCCCCceeecccCceeEEecccc--------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT--------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~--------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
++|+..+.||+|+||.||++... ...+.|.+|++++++++||||+++++++...+ ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG---RR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCC---CC
Confidence 46788899999999999997631 12357889999999999999999999876432 23
Q ss_pred eEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..++||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccccc
Confidence 4799999999999999986432 2357899999999998 999999999999999999999999999987
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhc---------cChH
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQV---------LDPE 862 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 862 (929)
+...... ........++..|+|||++.+..++.++||||+|++++++....-.....+....+. ....
T Consensus 158 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd05081 158 LPQDKEY---YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYH 234 (284)
T ss_pred ccCCCcc---eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHH
Confidence 6422110 000111234556999999998899999999999988877644221111111111111 1111
Q ss_pred HHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 863 LRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 863 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
+.......... .........+.+++.+||+.+|++||||+|++++|+++
T Consensus 235 ~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 235 LIELLKNNGRL--PAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHHhcCCcC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 11111111100 00011112233488899999999999999999999876
No 88
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.97 E-value=3e-31 Score=290.08 Aligned_cols=234 Identities=20% Similarity=0.275 Sum_probs=169.8
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~ 720 (929)
++|+..+.||+|+||+||+|.... ..+.|.+|+++++++ +||||+++++++... .
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~-----~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENR-----G 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccC-----C
Confidence 478888999999999999986431 124688899999999 799999999998543 3
Q ss_pred eEEEEEEecCCCCccccccccc------------------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeec
Q 002376 721 FLALVYEFLSNGSLGDWIHGER------------------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLD 776 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~------------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~ 776 (929)
..++||||+++|+|.++++... .++.|++.|++|||+. +|+||||||+||+++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~ 153 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVG 153 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEEC
Confidence 4899999999999999886321 2356899999999997 999999999999999
Q ss_pred CCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchh
Q 002376 777 EEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENV 855 (929)
Q Consensus 777 ~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~ 855 (929)
+++.+||+|||+++..... ........+..|+|||++.+..++.++||||+|++++++.. ...++.... .
T Consensus 154 ~~~~~kl~dfg~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~--~ 224 (297)
T cd05089 154 ENLASKIADFGLSRGEEVY-------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT--C 224 (297)
T ss_pred CCCeEEECCcCCCccccce-------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--H
Confidence 9999999999998643111 00111123567999999998899999999999988877543 222221111 1
Q ss_pred hhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 856 LQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 856 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
.+.... ..... ....+......+.+++.+||+.+|.+||+++++++.|+++.+...
T Consensus 225 ~~~~~~-----~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~ 280 (297)
T cd05089 225 AELYEK-----LPQGY--RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARK 280 (297)
T ss_pred HHHHHH-----HhcCC--CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 111111 10000 000011112233347889999999999999999999999988764
No 89
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=6.1e-31 Score=292.48 Aligned_cols=227 Identities=23% Similarity=0.247 Sum_probs=164.2
Q ss_pred CCCCceeecccCceeEEecccc-----------------------CcHHHHHHHHHHHHcc-CCccccceeeecccCCCC
Q 002376 662 NFSHENLIGSGSFGSVLHNERT-----------------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSLDSK 717 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~-----------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~ 717 (929)
+|+..+.||+|+||.||+++.. ...+.+.+|+.+++++ +||+|+++++++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~---- 76 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQT---- 76 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEec----
Confidence 4778899999999999986542 0123567899999999 59999999988843
Q ss_pred CcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 718 NMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 718 ~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
....++||||+++|+|.+++.... .++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 77 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~ 152 (332)
T cd05614 77 -EAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLS 152 (332)
T ss_pred -CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCC
Confidence 335899999999999999886433 2356899999999998 9999999999999999999999999999
Q ss_pred cccccccCCCCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhh
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLM 867 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~ 867 (929)
+...... ........||+.|||||++.+.. ++.++||||+|++++++.++..++..... .....+...+.
T Consensus 153 ~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~--- 224 (332)
T cd05614 153 KEFLSEE-----KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRIL--- 224 (332)
T ss_pred ccccccC-----CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHh---
Confidence 8643211 11123457999999999998754 78999999999999998766655432211 11111111111
Q ss_pred cccchhhhhhhHHHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 002376 868 TSNESQTIQLHDCLITIIGSVGLSCTTESPGGRI-----GIREALR 908 (929)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 908 (929)
..... .+..+...+++++.+|++.||++|| +++++++
T Consensus 225 ~~~~~----~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 225 KCDPP----FPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred cCCCC----CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 11111 1111223334477799999999999 6667764
No 90
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.97 E-value=3.5e-31 Score=282.98 Aligned_cols=228 Identities=25% Similarity=0.348 Sum_probs=166.1
Q ss_pred CCCCCceeecccCceeEEeccccC--------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG--------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~--------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
++|+..+.||+|+||.||+++... ..++|.+|++++++++||||+++++++... ...++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~iv~ 78 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQ-----KPLYIVT 78 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccC-----CCEEEEE
Confidence 357778899999999999886641 245788999999999999999999998543 3489999
Q ss_pred EecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 727 EFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
||+++|+|.++++... .++.+++.||+|||+. +|+||||||+||++++++.+||+|||.++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05114 79 EFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY 155 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCce
Confidence 9999999999886422 2356899999999998 999999999999999999999999999886532110
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTIQ 876 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 876 (929)
.......++..|+|||++.+..++.++||||+|++++++.. ...++..... .+.+. .+.. .....
T Consensus 156 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--~~~~~-~i~~---~~~~~--- 221 (256)
T cd05114 156 -----TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--YEVVE-MISR---GFRLY--- 221 (256)
T ss_pred -----eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHH-HHHC---CCCCC---
Confidence 11122245678999999998899999999999988777544 2322221111 01100 0110 00000
Q ss_pred hhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 002376 877 LHDCLITIIGSVGLSCTTESPGGRIGIREALRRL 910 (929)
Q Consensus 877 ~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L 910 (929)
.+......+.+++.+||+.+|++||+|+|+++.|
T Consensus 222 ~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 222 RPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 0011112233488899999999999999999886
No 91
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.97 E-value=2.6e-31 Score=297.86 Aligned_cols=227 Identities=23% Similarity=0.306 Sum_probs=161.7
Q ss_pred CCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
+|+..+.||+|+||.||++++.. ..+.+.+|++++++++||||+++++++.. ....++
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~l 149 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDH-----NGEIQV 149 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEecc-----CCeEEE
Confidence 34556889999999999987641 13568899999999999999999999854 334899
Q ss_pred EEEecCCCCccccccc----cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCC
Q 002376 725 VYEFLSNGSLGDWIHG----ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQS 800 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~----~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 800 (929)
||||+++|+|.+.... ...++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+....
T Consensus 150 v~e~~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~---- 222 (353)
T PLN00034 150 LLEFMDGGSLEGTHIADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM---- 222 (353)
T ss_pred EEecCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccccc----
Confidence 9999999999765431 124578999999999998 99999999999999999999999999998653211
Q ss_pred CccccceeccccccccccccCC-----CCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhcccchhh
Q 002376 801 SISSTHVFMGSIGYVPPEYGLG-----ERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMTSNESQT 874 (929)
Q Consensus 801 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~ 874 (929)
......+||..|+|||++.. ...+.++||||+|+++|++.....++..... .+.......... ......
T Consensus 223 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~ 297 (353)
T PLN00034 223 --DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMS---QPPEAP 297 (353)
T ss_pred --ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhcc---CCCCCC
Confidence 11223479999999998743 2346789999999888776555444331111 111111000000 000000
Q ss_pred hhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 875 IQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 875 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
.....-+++++.+||+.||++||++.|+++.
T Consensus 298 ----~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 298 ----ATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ----CccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111223337779999999999999999864
No 92
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=5.1e-31 Score=297.93 Aligned_cols=171 Identities=21% Similarity=0.294 Sum_probs=140.9
Q ss_pred CCCCCceeecccCceeEEeccccC----------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEecC
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG----------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLS 730 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~----------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~ 730 (929)
++|+..+.||+|+||.||++.... ..+.+.+|++++++++|||||++++++... ...++||||+.
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~-----~~~~lv~e~~~ 166 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQRGGTATEAHILRAINHPSIIQLKGTFTYN-----KFTCLILPRYK 166 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhhhhhHHHHHHHHhCCCCCCCCEeEEEEEC-----CeeEEEEecCC
Confidence 579999999999999999987652 234678999999999999999999998543 34799999995
Q ss_pred CCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCCc
Q 002376 731 NGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSI 802 (929)
Q Consensus 731 ~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~ 802 (929)
++|.+++...+ .++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+..... ..
T Consensus 167 -~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~-----~~ 237 (391)
T PHA03212 167 -TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI-----NA 237 (391)
T ss_pred -CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccccc-----cc
Confidence 78888775432 3357899999999998 9999999999999999999999999999753211 11
Q ss_pred cccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhH
Q 002376 803 SSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVK 845 (929)
Q Consensus 803 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~ 845 (929)
......+||+.|+|||++.+..++.++||||+|+++|++.+..
T Consensus 238 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~ 280 (391)
T PHA03212 238 NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCH 280 (391)
T ss_pred cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 1223457999999999999999999999999999888865543
No 93
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.97 E-value=6.3e-31 Score=290.78 Aligned_cols=218 Identities=24% Similarity=0.294 Sum_probs=159.1
Q ss_pred eeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEE
Q 002376 667 NLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYE 727 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e 727 (929)
+.||+|+||.||+++... ....+.+|++++++++||||+++++++... ...|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~-----~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH-----DRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecC-----CEEEEEEe
Confidence 469999999999887541 123566899999999999999999988543 35899999
Q ss_pred ecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCC
Q 002376 728 FLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799 (929)
Q Consensus 728 ~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~ 799 (929)
|+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~---- 148 (323)
T cd05595 76 YANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---- 148 (323)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCC----
Confidence 999999988876432 3367899999999998 9999999999999999999999999998753211
Q ss_pred CCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhH
Q 002376 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHD 879 (929)
Q Consensus 800 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 879 (929)
........||+.|||||++.+..++.++||||+|+++|++.....++..... .+.. .............
T Consensus 149 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~--~~~~----~~~~~~~~~~p~~--- 217 (323)
T cd05595 149 --GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLF----ELILMEEIRFPRT--- 217 (323)
T ss_pred --CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH--HHHH----HHHhcCCCCCCCC---
Confidence 1112335799999999999999999999999999888776554443322111 1111 1111111111111
Q ss_pred HHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 002376 880 CLITIIGSVGLSCTTESPGGRI-----GIREALR 908 (929)
Q Consensus 880 ~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 908 (929)
+..-+++++.+|++.||++|| ++.++++
T Consensus 218 -~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 218 -LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred -CCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 122233467799999999998 7888764
No 94
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.97 E-value=2.4e-31 Score=289.42 Aligned_cols=235 Identities=24% Similarity=0.314 Sum_probs=166.6
Q ss_pred CCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
++|+..+.||+|+||.||+++... ..+.+.+|++++++++||||+++++++.. ....
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRR-----RGKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEec-----CCEE
Confidence 468889999999999999987651 13467899999999999999999999854 3458
Q ss_pred EEEEEecCCCCcccccccc--------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGE--------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~--------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
++||||++++.+..+.+.. +.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 152 (287)
T cd07848 76 YLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSE 152 (287)
T ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence 9999999988776554311 23467899999999998 999999999999999999999999999986532
Q ss_pred ccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--h---hhhccC---hHHHHh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE--N---VLQVLD---PELRQL 866 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~---~~~~~~---~~l~~~ 866 (929)
.. ........||+.|+|||++.+..++.++||||+|+++|++..+..++..... . ..+... ......
T Consensus 153 ~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (287)
T cd07848 153 GS-----NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKL 227 (287)
T ss_pred cc-----cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHh
Confidence 11 1112235789999999999998999999999999988887655433322111 0 000000 000000
Q ss_pred hcccc--------------hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 867 MTSNE--------------SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 867 ~~~~~--------------~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..... .........++..+.+++.+|++.||++|||++|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 228 FYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred hhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000 0000000112333455888999999999999999874
No 95
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.97 E-value=4.1e-31 Score=288.91 Aligned_cols=237 Identities=22% Similarity=0.294 Sum_probs=167.7
Q ss_pred hCCCCCceeecccCceeEEecccc---------------------------------CcHHHHHHHHHHHHccCCccccc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT---------------------------------GSWKSFIAECETLRNVRHRNLVK 706 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~---------------------------------~~~~~~~~E~~~l~~l~Hpniv~ 706 (929)
.++|+..+.||+|+||.||+++.. ...+.|.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 357888999999999999986532 12356888999999999999999
Q ss_pred eeeecccCCCCCcceEEEEEEecCCCCccccccccc-------------------cccccHHHHHHHhhhCCCCCEEecC
Q 002376 707 LITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER-------------------KNELDITSALDYLHNDCEVPVVHSD 767 (929)
Q Consensus 707 l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-------------------~~~~~ia~aL~yLH~~~~~~iiHrD 767 (929)
++++|... ...++||||+++++|.+++.... .++.|++.||+|||+. +|+|||
T Consensus 84 ~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~d 155 (296)
T cd05051 84 LLGVCTVD-----PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRD 155 (296)
T ss_pred EEEEEecC-----CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccc
Confidence 99998543 34799999999999999886432 2356899999999998 999999
Q ss_pred CCCCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchh--H
Q 002376 768 LKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIV--K 845 (929)
Q Consensus 768 lk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~--~ 845 (929)
|||+||++++++.+|++|||+++........ .......+++.|||||++.+..++.++||||+|++++++... .
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 231 (296)
T cd05051 156 LATRNCLVGKNYTIKIADFGMSRNLYSSDYY----RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCRE 231 (296)
T ss_pred cchhceeecCCCceEEccccceeecccCcce----eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCC
Confidence 9999999999999999999999865322110 111233567899999999988999999999999887775431 1
Q ss_pred HhhhcCCchhhhccChHHHHhhcc-cchhhh-hhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 846 WVESNLPENVLQVLDPELRQLMTS-NESQTI-QLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 846 ~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~-~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
.++...+. .+.+... ...... ...... ....+..++.+ ++.+|++.||++||||+|+++.|++
T Consensus 232 ~p~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~-li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 232 QPYEHLTD--QQVIENA-GHFFRDDGRQIYLPRPPNCPKDIYE-LMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred CCCCCcCh--HHHHHHH-HhccccccccccCCCccCCCHHHHH-HHHHHhccChhcCCCHHHHHHHhcC
Confidence 11111111 1111110 000000 000000 00011123344 8889999999999999999998863
No 96
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.97 E-value=6.1e-31 Score=287.17 Aligned_cols=236 Identities=21% Similarity=0.345 Sum_probs=170.1
Q ss_pred HhhCCCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHcc-CCccccceeeecccC
Q 002376 658 RATGNFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSL 714 (929)
Q Consensus 658 ~~~~~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~ 714 (929)
...++|+..+.||+|+||.||++... ....++.+|+++++++ +||||+++++++...
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 34457888899999999999987642 1123578899999999 899999999998543
Q ss_pred CCCCcceEEEEEEecCCCCccccccccc------------------------cccccHHHHHHHhhhCCCCCEEecCCCC
Q 002376 715 DSKNMEFLALVYEFLSNGSLGDWIHGER------------------------KNELDITSALDYLHNDCEVPVVHSDLKP 770 (929)
Q Consensus 715 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~------------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~ 770 (929)
...++||||+++|+|.++++..+ .++.|++.|++|||+. +|+||||||
T Consensus 89 -----~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp 160 (293)
T cd05053 89 -----GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAA 160 (293)
T ss_pred -----CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Cccccccce
Confidence 34899999999999999885321 2356899999999987 999999999
Q ss_pred CCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhh
Q 002376 771 GNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVES 849 (929)
Q Consensus 771 ~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~ 849 (929)
+||++++++.+|++|||+++.+...... .......++..|+|||++.+..++.++||||+|++++++.. ...++.
T Consensus 161 ~Nil~~~~~~~kL~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 236 (293)
T cd05053 161 RNVLVTEDHVMKIADFGLARDIHHIDYY----RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 236 (293)
T ss_pred eeEEEcCCCeEEeCccccccccccccce----eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCC
Confidence 9999999999999999999865322110 01112235678999999999999999999999998877532 221111
Q ss_pred cCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhH
Q 002376 850 NLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQ 914 (929)
Q Consensus 850 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~ 914 (929)
..+ ..+ +........... ....+...+.+ ++.+||+.||++||||.|+++.|+++.
T Consensus 237 ~~~--~~~-----~~~~~~~~~~~~-~~~~~~~~~~~-li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 237 GIP--VEE-----LFKLLKEGYRME-KPQNCTQELYH-LMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CCC--HHH-----HHHHHHcCCcCC-CCCCCCHHHHH-HHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 111 111 111111110000 00011223333 888999999999999999999999874
No 97
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.97 E-value=4.5e-31 Score=287.36 Aligned_cols=236 Identities=24% Similarity=0.325 Sum_probs=171.5
Q ss_pred CCCCCceeecccCceeEEecccc---------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
++|...+.||+|+||+||++... ...+.+.+|++++++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 79 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG----- 79 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC-----
Confidence 46778899999999999988631 1134688999999999999999999998543
Q ss_pred ceEEEEEEecCCCCccccccccc---------------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER---------------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE 778 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~---------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~ 778 (929)
...++||||+++|+|.++++... .++.|++.||+|||+. +++||||||+||+++++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~ 156 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 156 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccC
Confidence 34799999999999998886321 2356899999999998 99999999999999999
Q ss_pred CceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhh
Q 002376 779 MTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQ 857 (929)
Q Consensus 779 ~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~ 857 (929)
+.+||+|||+++...... .........++..|+|||++.+..++.++||||+|++++++.+ ...++..... .+
T Consensus 157 ~~~kl~dfg~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~--~~ 230 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTD----YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--NE 230 (288)
T ss_pred CcEEeccCCccccccCCc----eeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HH
Confidence 999999999998653211 0111122346788999999998899999999999988777543 2222211111 11
Q ss_pred ccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 858 VLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 858 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
............ ........+.+++.+||+.||.+|||+.|+.+.|+++....
T Consensus 231 ~~~~i~~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 231 VIECITQGRVLQ-------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred HHHHHHcCCcCC-------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 111100000000 00011122334888999999999999999999999988653
No 98
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.8e-32 Score=290.97 Aligned_cols=219 Identities=22% Similarity=0.324 Sum_probs=159.2
Q ss_pred ceeecccCceeEEecccc----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEec
Q 002376 666 ENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFL 729 (929)
Q Consensus 666 ~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~ 729 (929)
.-.+|.|+||+||++..+ ...++|.-|+++|+.++||+||++++.|+-.+ .+|+..|||
T Consensus 37 iGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~en-----kLwiliEFC 111 (1187)
T KOG0579|consen 37 IGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFEN-----KLWILIEFC 111 (1187)
T ss_pred HhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC-----ceEEEEeec
Confidence 456899999999998876 13467899999999999999999999876533 389999999
Q ss_pred CCCCccccccc---------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCC
Q 002376 730 SNGSLGDWIHG---------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQS 800 (929)
Q Consensus 730 ~~gsL~~~l~~---------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 800 (929)
+||-....+-+ .+.++.+++.||.|||++ .|||||+|+.|||++-+|.++++|||++.... .
T Consensus 112 ~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~------~ 182 (1187)
T KOG0579|consen 112 GGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNK------S 182 (1187)
T ss_pred CCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccch------h
Confidence 99988765532 234477899999999998 99999999999999999999999999876432 1
Q ss_pred CccccceeccccccccccccC-----CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch---
Q 002376 801 SISSTHVFMGSIGYVPPEYGL-----GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES--- 872 (929)
Q Consensus 801 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--- 872 (929)
.......+.|||+|||||++. ..+|+.++||||+|+.+.+|.-.+-+...+. .+.++- .....+++
T Consensus 183 t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln--pMRVll----KiaKSePPTLl 256 (1187)
T KOG0579|consen 183 TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN--PMRVLL----KIAKSEPPTLL 256 (1187)
T ss_pred HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc--hHHHHH----HHhhcCCCccc
Confidence 223345689999999999865 5579999999999977666533322221111 111111 11111111
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
++..+...+.. +..+|+..||..||+++++++
T Consensus 257 qPS~Ws~~F~D----fLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 257 QPSHWSRSFSD----FLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred CcchhhhHHHH----HHHHHHhcCCccCCCHHHHhh
Confidence 11112223343 555999999999999999864
No 99
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.97 E-value=4.5e-31 Score=286.67 Aligned_cols=230 Identities=20% Similarity=0.312 Sum_probs=166.2
Q ss_pred CCCCCceeecccCceeEEecccc---------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
++|+..+.||+|+||+||+|+.. ...+.|.+|++++++++||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 80 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ---- 80 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC----
Confidence 35777899999999999998631 01246889999999999999999999985433
Q ss_pred ceEEEEEEecCCCCccccccccc-------------------------cccccHHHHHHHhhhCCCCCEEecCCCCCCee
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER-------------------------KNELDITSALDYLHNDCEVPVVHSDLKPGNIL 774 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~-------------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NIL 774 (929)
..|+||||+++|+|.+++.... .++.+++.||+|||+. +|+||||||+||+
T Consensus 81 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nil 156 (283)
T cd05090 81 -PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNIL 156 (283)
T ss_pred -ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEE
Confidence 3799999999999999884211 2356899999999998 8999999999999
Q ss_pred ecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCc
Q 002376 775 LDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPE 853 (929)
Q Consensus 775 l~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~ 853 (929)
+++++.+|++|||+++....... ........++..|+|||++.+..++.++||||+|++++++.. ...++.....
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~ 232 (283)
T cd05090 157 IGEQLHVKISDLGLSREIYSADY----YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN 232 (283)
T ss_pred EcCCCcEEeccccccccccCCcc----eecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH
Confidence 99999999999999986532111 111122346778999999988899999999999988777543 2222211111
Q ss_pred -hhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 854 -NVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 854 -~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
...+.++. .... ...+.....+.+++.+||+.||++||++.++.++|+.
T Consensus 233 ~~~~~~~~~--------~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 233 QEVIEMVRK--------RQLL--PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHHc--------CCcC--CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 11111111 0000 0001111223337779999999999999999998864
No 100
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.97 E-value=5.2e-31 Score=287.37 Aligned_cols=235 Identities=24% Similarity=0.348 Sum_probs=171.8
Q ss_pred CCCCCceeecccCceeEEecccc---------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
.+|...+.||+|+||.||+++.. ...+.+.+|++++++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 79 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDG----- 79 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccC-----
Confidence 35777899999999999988631 1135788999999999999999999998543
Q ss_pred ceEEEEEEecCCCCcccccccc------------------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeee
Q 002376 720 EFLALVYEFLSNGSLGDWIHGE------------------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILL 775 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~------------------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl 775 (929)
...++||||+++++|.+++... ..++.|++.|++|||+. +|+||||||+||++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~ 156 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLV 156 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEE
Confidence 3479999999999999998532 12356899999999998 99999999999999
Q ss_pred cCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCch
Q 002376 776 DEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPEN 854 (929)
Q Consensus 776 ~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~ 854 (929)
++++.+||+|||+++....... ........|+..|+|||++.+..++.++||||+|++++++.+ ...++.....
T Consensus 157 ~~~~~~~l~dfg~a~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~- 231 (291)
T cd05094 157 GANLLVKIGDFGMSRDVYSTDY----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN- 231 (291)
T ss_pred ccCCcEEECCCCcccccCCCce----eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-
Confidence 9999999999999976532110 011123456889999999999999999999999988777544 3333222211
Q ss_pred hhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 855 VLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 855 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
.+.++. ... ..... .....+..+.+++.+||+.+|++||++++|+++|+++...
T Consensus 232 -~~~~~~-~~~---~~~~~---~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 232 -TEVIEC-ITQ---GRVLE---RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred -HHHHHH-HhC---CCCCC---CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 111110 110 00000 0011122233488899999999999999999999998664
No 101
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.97 E-value=4.4e-31 Score=287.83 Aligned_cols=232 Identities=22% Similarity=0.323 Sum_probs=168.5
Q ss_pred CCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 662 NFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
+|...+.||+|+||.||+|... ...+++.+|+.+++.++||||++++++|...+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 76 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDG---- 76 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC----
Confidence 3667789999999999998642 01346889999999999999999999985433
Q ss_pred ceEEEEEEecCCCCccccccccc--------------------------------cccccHHHHHHHhhhCCCCCEEecC
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER--------------------------------KNELDITSALDYLHNDCEVPVVHSD 767 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~--------------------------------~~~~~ia~aL~yLH~~~~~~iiHrD 767 (929)
..++||||+++|+|.+++...+ .++.|++.|++|||+. +|+|||
T Consensus 77 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~d 152 (290)
T cd05045 77 -PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRD 152 (290)
T ss_pred -CcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhh
Confidence 3799999999999999875321 2356899999999998 999999
Q ss_pred CCCCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHH
Q 002376 768 LKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKW 846 (929)
Q Consensus 768 lk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~ 846 (929)
|||+||++++++.+||+|||+++....... ........++..|+|||++.+..++.++||||+|++++++.. ...
T Consensus 153 ikp~nill~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~ 228 (290)
T cd05045 153 LAARNVLVAEGRKMKISDFGLSRDVYEEDS----YVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 228 (290)
T ss_pred hhhheEEEcCCCcEEeccccccccccCccc----hhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999986532211 011122346778999999988899999999999988777543 332
Q ss_pred hhhcCCc-hhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHH
Q 002376 847 VESNLPE-NVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQE 915 (929)
Q Consensus 847 ~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~ 915 (929)
++..... .+.+.+.... ... ... .+..++. +++.+|++.+|++||+++|+++.|+++..
T Consensus 229 p~~~~~~~~~~~~~~~~~----~~~--~~~---~~~~~~~-~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 229 PYPGIAPERLFNLLKTGY----RME--RPE---NCSEEMY-NLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred CCCCCCHHHHHHHHhCCC----CCC--CCC---CCCHHHH-HHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 2221111 1111111100 000 000 1112233 37789999999999999999999999764
No 102
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5.8e-31 Score=275.92 Aligned_cols=251 Identities=23% Similarity=0.297 Sum_probs=178.0
Q ss_pred CCCCCceeecccCceeEEeccccC-----------cHHHHHHHHHHHHcc--CCccccceeeecccCCCCCcceEEEEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------SWKSFIAECETLRNV--RHRNLVKLITSCSSLDSKNMEFLALVYE 727 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------~~~~~~~E~~~l~~l--~Hpniv~l~~~~~~~~~~~~~~~~lV~e 727 (929)
.+....+.||+|.||+||+|++++ +.+.+.+|.++.+.+ +|+||..+++.-.... ..--++|||.+
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~-gs~TQLwLvTd 289 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDN-GSWTQLWLVTD 289 (513)
T ss_pred heeEEEEEecCccccceeeccccCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCC-CceEEEEEeee
Confidence 456677999999999999999984 456788999988874 9999999988755433 23446899999
Q ss_pred ecCCCCccccccccc-------cccccHHHHHHHhhhC-----CCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 728 FLSNGSLGDWIHGER-------KNELDITSALDYLHND-----CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 728 ~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~-----~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
|-+.|||+|||.... +.++.+|.||+|||.. ..|.|.|||||+.|||+..++.+.|+|+|+|-.....
T Consensus 290 YHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~ 369 (513)
T KOG2052|consen 290 YHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSD 369 (513)
T ss_pred cccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEeccc
Confidence 999999999997432 3467899999999964 4689999999999999999999999999999765433
Q ss_pred cCCCCCccccceeccccccccccccCCCC------CCCCCCCCCCcCCCCCcchhHHhhhcCCc---hhhhcc--ChHHH
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGER------PSTAGDVPTSESFAGEFNIVKWVESNLPE---NVLQVL--DPELR 864 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DV~s~g~~~~~~~~~~~~~~~~~~---~~~~~~--~~~l~ 864 (929)
.+ .-.......+||-+|||||++.... --..+||||||.++||+.-.--..+...+ ++.+++ ||...
T Consensus 370 t~--~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~e 447 (513)
T KOG2052|consen 370 TD--TIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFE 447 (513)
T ss_pred CC--cccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHH
Confidence 21 1112234568999999999986542 24679999999777774322221111111 112221 22211
Q ss_pred Hh--------hcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHH
Q 002376 865 QL--------MTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQE 915 (929)
Q Consensus 865 ~~--------~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~ 915 (929)
+. +....+.+....+++..+.+ ++..||..+|+.|-|+--+-+.|.++.+
T Consensus 448 eMrkVVCv~~~RP~ipnrW~s~~~l~~m~k-lMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 448 EMRKVVCVQKLRPNIPNRWKSDPALRVMAK-LMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred HHhcceeecccCCCCCcccccCHHHHHHHH-HHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 11 11111111222245665666 9999999999999999888888888765
No 103
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.96 E-value=3.9e-31 Score=298.81 Aligned_cols=238 Identities=19% Similarity=0.267 Sum_probs=170.7
Q ss_pred HHhhCCCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHccC-Cccccceeeeccc
Q 002376 657 RRATGNFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNVR-HRNLVKLITSCSS 713 (929)
Q Consensus 657 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~ 713 (929)
....++|...+.||+|+||.||+|++. ...+.+.+|++++.++. |||||+++++|..
T Consensus 33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~ 112 (401)
T cd05107 33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK 112 (401)
T ss_pred eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc
Confidence 344456778899999999999998642 11246889999999997 9999999999965
Q ss_pred CCCCCcceEEEEEEecCCCCccccccccc---------------------------------------------------
Q 002376 714 LDSKNMEFLALVYEFLSNGSLGDWIHGER--------------------------------------------------- 742 (929)
Q Consensus 714 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------------------------------------------------- 742 (929)
.. ..++||||+++|+|.+++++.+
T Consensus 113 ~~-----~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (401)
T cd05107 113 GG-----PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESA 187 (401)
T ss_pred CC-----CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcccc
Confidence 33 4799999999999999886321
Q ss_pred -------------------------------------------------------cccccHHHHHHHhhhCCCCCEEecC
Q 002376 743 -------------------------------------------------------KNELDITSALDYLHNDCEVPVVHSD 767 (929)
Q Consensus 743 -------------------------------------------------------~~~~~ia~aL~yLH~~~~~~iiHrD 767 (929)
.++.|++.||+|||+. +|+|||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrd 264 (401)
T cd05107 188 DYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRD 264 (401)
T ss_pred CccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCccc
Confidence 1235899999999987 999999
Q ss_pred CCCCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHH
Q 002376 768 LKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKW 846 (929)
Q Consensus 768 lk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~ 846 (929)
|||+|||+++++.+|++|||+++....... ........|+..|||||++.+..++.++||||+|++++++.. ...
T Consensus 265 lkp~NiLl~~~~~~kL~DfGla~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~ 340 (401)
T cd05107 265 LAARNVLICEGKLVKICDFGLARDIMRDSN----YISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGT 340 (401)
T ss_pred CCcceEEEeCCCEEEEEecCcceecccccc----cccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999986532111 011122357889999999998889999999999988777543 222
Q ss_pred hhhcCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhH
Q 002376 847 VESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQ 914 (929)
Q Consensus 847 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~ 914 (929)
++...+. .+ .......... +...+......+.+++.+||+.+|++||+++|+++.|+++.
T Consensus 341 P~~~~~~--~~----~~~~~~~~~~--~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 341 PYPELPM--NE----QFYNAIKRGY--RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred CCCCCCc--hH----HHHHHHHcCC--CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 2221111 11 0111110000 00001111222334777999999999999999999999864
No 104
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-32 Score=273.19 Aligned_cols=225 Identities=24% Similarity=0.296 Sum_probs=167.2
Q ss_pred CCCceeecccCceeEEecccc--------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEe
Q 002376 663 FSHENLIGSGSFGSVLHNERT--------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF 728 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~--------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~ 728 (929)
|+...++|+|+||.||++.++ .+.++..+|+.+|++++.|+||++||.|+... .+|+||||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~s-----DLWIVMEY 109 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHS-----DLWIVMEY 109 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCC-----ceEeehhh
Confidence 455688999999999998776 34678999999999999999999999886433 38999999
Q ss_pred cCCCCccccccccccc---------cccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCC
Q 002376 729 LSNGSLGDWIHGERKN---------ELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799 (929)
Q Consensus 729 ~~~gsL~~~l~~~~~~---------~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~ 799 (929)
|..|+..+.++.+++. ..+.++||+|||.. .-||||||+.|||++.+|.+|++|||+|..+....
T Consensus 110 CGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM--- 183 (502)
T KOG0574|consen 110 CGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM--- 183 (502)
T ss_pred cCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhH---
Confidence 9999999999855543 34567899999987 78999999999999999999999999998774321
Q ss_pred CCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhH
Q 002376 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHD 879 (929)
Q Consensus 800 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 879 (929)
.....+.||+.|||||++..-.|..++||||+|+.+.|+.-+.-++..+. .+..++- ++..+++....++
T Consensus 184 ---AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIH-PMRAIFM------IPT~PPPTF~KPE 253 (502)
T KOG0574|consen 184 ---AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIH-PMRAIFM------IPTKPPPTFKKPE 253 (502)
T ss_pred ---HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccc-ccceeEe------ccCCCCCCCCChH
Confidence 12345689999999999999999999999999988877644333222211 1111110 1111111111111
Q ss_pred HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 880 CLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 880 ~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.-+.-..++++.|+-..|++|-|+.++++
T Consensus 254 ~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 254 EWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred hhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 12222223666999999999999988764
No 105
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.96 E-value=1.4e-30 Score=288.13 Aligned_cols=218 Identities=24% Similarity=0.297 Sum_probs=160.3
Q ss_pred eeecccCceeEEecccc-----------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 667 NLIGSGSFGSVLHNERT-----------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~-----------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+.||+|+||.||+++.. .....+.+|+++++.++||||+++++++... ...|
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~-----~~~~ 76 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTG-----GKLY 76 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecC-----CeEE
Confidence 57999999999987642 0123467899999999999999999998543 3589
Q ss_pred EEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (323)
T cd05584 77 LILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE 153 (323)
T ss_pred EEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccC
Confidence 9999999999999886433 2356899999999998 9999999999999999999999999998753211
Q ss_pred cCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTI 875 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 875 (929)
........||+.|+|||++.+..++.++||||+|+++|++..+..++..... .+.+ ............
T Consensus 154 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~--~~~~----~~~~~~~~~~~~ 221 (323)
T cd05584 154 ------GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR--KKTI----DKILKGKLNLPP 221 (323)
T ss_pred ------CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH--HHHH----HHHHcCCCCCCC
Confidence 1112335799999999999998999999999999888887665554432221 1111 111111111111
Q ss_pred hhhHHHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 002376 876 QLHDCLITIIGSVGLSCTTESPGGRI-----GIREALR 908 (929)
Q Consensus 876 ~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 908 (929)
.+...+.+++.+|++.||++|| ++.++++
T Consensus 222 ----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 222 ----YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred ----CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 1122233477799999999999 7777765
No 106
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.96 E-value=1.3e-30 Score=295.01 Aligned_cols=232 Identities=21% Similarity=0.255 Sum_probs=164.2
Q ss_pred CCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
.|+..+.||+|+||+||+|+... ..+.+.+|++++++++|||||++++++.+ ....
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~-----~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD-----KDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec-----CCEE
Confidence 57788999999999999987641 12357789999999999999999999854 3358
Q ss_pred EEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
|+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~ 153 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRW 153 (381)
T ss_pred EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccccc
Confidence 99999999999999886432 3356899999999998 999999999999999999999999999864321
Q ss_pred ccCCC-----------------------------------------CCccccceeccccccccccccCCCCCCCCCCCCC
Q 002376 795 RVDNQ-----------------------------------------SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPT 833 (929)
Q Consensus 795 ~~~~~-----------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s 833 (929)
..... .........+||+.|||||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS 233 (381)
T cd05626 154 THNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWS 233 (381)
T ss_pred ccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceee
Confidence 00000 0000112357999999999999989999999999
Q ss_pred CcCCCCCcchhHHhhhcCCch--hhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhcc--ccCCCCCCCCCHHHHHHH
Q 002376 834 SESFAGEFNIVKWVESNLPEN--VLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLS--CTTESPGGRIGIREALRR 909 (929)
Q Consensus 834 ~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~--Cl~~dP~~RPs~~ev~~~ 909 (929)
+|+++|++.++..++...... ...+...... . .............. ++.+ |+..+|.+||+++|++..
T Consensus 234 lG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~--~--~~~~~~~~s~~~~d----li~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 234 VGVILFEMLVGQPPFLAPTPTETQLKVINWENT--L--HIPPQVKLSPEAVD----LITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred hhhHHHHHHhCCCCCcCCCHHHHHHHHHccccc--c--CCCCCCCCCHHHHH----HHHHHccCcccccCCCCHHHHhcC
Confidence 999888876665554332210 1111110000 0 00000111122233 4434 677788889999999753
No 107
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.96 E-value=1.4e-30 Score=294.59 Aligned_cols=180 Identities=24% Similarity=0.279 Sum_probs=144.4
Q ss_pred CCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
+|+..+.||+|+||.||+++... ..+.+.+|++++++++||||+++++++.+ ...+
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-----~~~~ 76 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQD-----KDNL 76 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc-----CCEE
Confidence 68889999999999999987541 12457789999999999999999999854 3458
Q ss_pred EEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
|+||||+++|+|.+++.... .++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 77 ~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~ 153 (376)
T cd05598 77 YFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (376)
T ss_pred EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence 99999999999999986433 2357899999999998 999999999999999999999999999853310
Q ss_pred ccCC-------------------------------------CCCccccceeccccccccccccCCCCCCCCCCCCCCcCC
Q 002376 795 RVDN-------------------------------------QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESF 837 (929)
Q Consensus 795 ~~~~-------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~ 837 (929)
.... ..........+||+.|||||++.+..++.++||||+|++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 233 (376)
T cd05598 154 THDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 233 (376)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccce
Confidence 0000 000001123579999999999999999999999999999
Q ss_pred CCCcchhHHhhh
Q 002376 838 AGEFNIVKWVES 849 (929)
Q Consensus 838 ~~~~~~~~~~~~ 849 (929)
+|++.++..++.
T Consensus 234 lyell~G~~Pf~ 245 (376)
T cd05598 234 LYEMLVGQPPFL 245 (376)
T ss_pred eeehhhCCCCCC
Confidence 999876665554
No 108
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.96 E-value=9.6e-31 Score=282.32 Aligned_cols=235 Identities=22% Similarity=0.340 Sum_probs=168.5
Q ss_pred CCCceeecccCceeEEeccccC---------------------cHHHHHHHHHHHHccCCccccceeeecccCCC-CCcc
Q 002376 663 FSHENLIGSGSFGSVLHNERTG---------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS-KNME 720 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~~---------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-~~~~ 720 (929)
|+..+.||+|+||.||+|.... ..+.+.+|++.++.++||||+++++++...+. ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567899999999999886421 12468899999999999999999998865443 2233
Q ss_pred eEEEEEEecCCCCccccccccc--------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDF 786 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~Df 786 (929)
..++||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 4799999999999998874221 2357899999999998 9999999999999999999999999
Q ss_pred ccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHH
Q 002376 787 GLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQ 865 (929)
Q Consensus 787 Gla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ 865 (929)
|+++.+...... .......++..|+|||++.+..++.++||||+|++++++.. ...++..... . .+..
T Consensus 158 g~~~~~~~~~~~----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~--~-----~~~~ 226 (273)
T cd05035 158 GLSKKIYSGDYY----RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN--H-----EIYD 226 (273)
T ss_pred cceeeccccccc----cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH--H-----HHHH
Confidence 999865322110 11112235678999999988899999999999988877544 3222221111 1 1111
Q ss_pred hhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 866 LMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
......... ....+..++.+ ++.+||+.||++||++.|+++.|+++
T Consensus 227 ~~~~~~~~~-~~~~~~~~~~~-li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 227 YLRHGNRLK-QPEDCLDELYD-LMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HHHcCCCCC-CCcCCCHHHHH-HHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 111110000 00112233333 78899999999999999999999875
No 109
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.96 E-value=7.4e-31 Score=295.76 Aligned_cols=231 Identities=20% Similarity=0.234 Sum_probs=165.5
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||+|+||+||+++... ..+.+.+|+.+++.++||||+++++++.+ ...
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-----~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQD-----ENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-----CCe
Confidence 478889999999999999987641 12346789999999999999999999854 335
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.|+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 76 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 152 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLK 152 (364)
T ss_pred EEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceecc
Confidence 899999999999999886432 3467899999999998 99999999999999999999999999997653
Q ss_pred cccCCCC--------------------------------CccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCc
Q 002376 794 ERVDNQS--------------------------------SISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEF 841 (929)
Q Consensus 794 ~~~~~~~--------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~ 841 (929)
....... ........+||+.|||||++.+..++.++||||+|++++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 232 (364)
T cd05599 153 KSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEM 232 (364)
T ss_pred ccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHh
Confidence 2110000 00001124699999999999999999999999999998887
Q ss_pred chhHHhhhcCCc-h-hhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCC---HHHHHH
Q 002376 842 NIVKWVESNLPE-N-VLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIG---IREALR 908 (929)
Q Consensus 842 ~~~~~~~~~~~~-~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs---~~ev~~ 908 (929)
..+..++..... . ...+.... ... .........+ .+++++.+|+. +|.+|++ ++|+++
T Consensus 233 ~~G~~Pf~~~~~~~~~~~i~~~~--~~~--~~~~~~~~s~----~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 233 LVGYPPFCSDNPQETYRKIINWK--ETL--QFPDEVPLSP----EAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred hcCCCCCCCCCHHHHHHHHHcCC--Ccc--CCCCCCCCCH----HHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 665554432221 0 11111000 000 0000001112 22336668886 9999998 888875
No 110
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.96 E-value=7.2e-31 Score=311.81 Aligned_cols=241 Identities=19% Similarity=0.258 Sum_probs=173.3
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..++||+|+||.||+|.... ..++|.+|++++++++||||+++++++.+. ..
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~-----~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDG-----DP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeC-----CE
Confidence 578899999999999999986541 134688999999999999999999998543 34
Q ss_pred EEEEEEecCCCCcccccccc-------------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceE
Q 002376 722 LALVYEFLSNGSLGDWIHGE-------------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAK 782 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~-------------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 782 (929)
.++||||+++|+|.++++.. ..++.||++||+|||+. +|+||||||+||+++.++.+|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vK 153 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVV 153 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEE
Confidence 89999999999999987521 12356899999999998 999999999999999999999
Q ss_pred EeccccccccccccCCC------------CCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhc
Q 002376 783 VGDFGLARFLLERVDNQ------------SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESN 850 (929)
Q Consensus 783 i~DfGla~~~~~~~~~~------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~ 850 (929)
|+|||+++......... .........+||+.|||||++.+..++.++||||+|++++++..+..++..
T Consensus 154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 99999998762111100 001112235799999999999999999999999999888887665544332
Q ss_pred CCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCC-CHHHHHHHHHhhHHH
Q 002376 851 LPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRI-GIREALRRLKSSQEI 916 (929)
Q Consensus 851 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-s~~ev~~~L~~~~~~ 916 (929)
... .++... ........ ......++..+.+++.+|++.||++|| +++++.+.|+...+.
T Consensus 234 ~~~--~ki~~~---~~i~~P~~--~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 234 KKG--RKISYR---DVILSPIE--VAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred cch--hhhhhh---hhccChhh--ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 111 111111 00000000 000011222333477799999999996 677788888877654
No 111
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.96 E-value=6.9e-31 Score=295.27 Aligned_cols=233 Identities=20% Similarity=0.243 Sum_probs=166.8
Q ss_pred HHHhhCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCC
Q 002376 656 LRRATGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS 716 (929)
Q Consensus 656 l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~ 716 (929)
+....++|+..+.||+|+||.||+++... ..+.+.+|+.+++.++||||+++++++..
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~--- 114 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQD--- 114 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc---
Confidence 33445789999999999999999887641 12347789999999999999999999854
Q ss_pred CCcceEEEEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 717 KNMEFLALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 717 ~~~~~~~lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
....|+||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+|
T Consensus 115 --~~~~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a 189 (370)
T cd05621 115 --DKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTC 189 (370)
T ss_pred --CCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccc
Confidence 345899999999999999886432 3467899999999998 9999999999999999999999999999
Q ss_pred cccccccCCCCCccccceeccccccccccccCCCC----CCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhccChHH
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER----PSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQVLDPEL 863 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~l 863 (929)
+..... ........+||+.|||||++.+.. ++.++||||+|+++|++.++..++..... ...++.+.
T Consensus 190 ~~~~~~-----~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~-- 262 (370)
T cd05621 190 MKMDET-----GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDH-- 262 (370)
T ss_pred eecccC-----CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhC--
Confidence 865321 111123457999999999987643 78999999999888876655544432211 11111110
Q ss_pred HHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCC--CCCHHHHHHH
Q 002376 864 RQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGG--RIGIREALRR 909 (929)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPs~~ev~~~ 909 (929)
......+....+...+++++.+|+..+|.+ ||++.|+++.
T Consensus 263 ------~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 263 ------KNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred ------CcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 000000000112233344666888755543 8899998764
No 112
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.96 E-value=1.4e-31 Score=286.48 Aligned_cols=225 Identities=30% Similarity=0.436 Sum_probs=157.4
Q ss_pred CceeecccCceeEEeccccC---------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 665 HENLIGSGSFGSVLHNERTG---------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 665 ~~~~iG~G~~g~Vy~~~~~~---------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
..+.||.|+||.||+|.+.. ..+.|.+|++.+++++||||++++|+|...+. .+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~-----~~ 77 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEP-----LF 77 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSS-----EE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccc-----cc
Confidence 35789999999999987660 14689999999999999999999999974332 89
Q ss_pred EEEEecCCCCcccccccc--c--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGE--R--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~--~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
+||||+++|+|.++++.. . .++.|||+||+|||+. +++||||+++||++++++.+||+|||+++...
T Consensus 78 lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~ 154 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPIS 154 (259)
T ss_dssp EEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc
Confidence 999999999999998764 1 2367999999999998 89999999999999999999999999998652
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
.. ..........+...|+|||++.+..++.++||||||++++|+.. ...++..... ..+...+.....
T Consensus 155 ~~----~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~-------~~~~~~~~~~~~ 223 (259)
T PF07714_consen 155 EK----SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN-------EEIIEKLKQGQR 223 (259)
T ss_dssp TS----SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH-------HHHHHHHHTTEE
T ss_pred cc----ccccccccccccccccccccccccccccccccccccccccccccccccccccccc-------cccccccccccc
Confidence 11 11111122356788999999999899999999999987777544 2222222211 111111111111
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRL 910 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L 910 (929)
...+.....-+.+++.+||+.||++||+|+|++++|
T Consensus 224 --~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 --LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp --TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred --ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 111111112223377799999999999999999876
No 113
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=2e-31 Score=310.58 Aligned_cols=233 Identities=24% Similarity=0.315 Sum_probs=179.9
Q ss_pred HhhCCCCCceeecccCceeEEecccc------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 658 RATGNFSHENLIGSGSFGSVLHNERT------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 658 ~~~~~~~~~~~iG~G~~g~Vy~~~~~------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
..+-++....+||.|.||.||-|... +..+...+|+.++..++|||+|+++|+-.+++.
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRek--- 1308 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREK--- 1308 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHH---
Confidence 34556777889999999999987654 223456789999999999999999999766443
Q ss_pred ceEEEEEEecCCCCcccccccc--------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGE--------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~--------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
.+|.||||++|+|.+.+... +.+..|++.|++|||+. +||||||||+||+++.+|.+|.+|||.|+.
T Consensus 1309 --v~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~k 1383 (1509)
T KOG4645|consen 1309 --VYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVK 1383 (1509)
T ss_pred --HHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeE
Confidence 79999999999999998743 23467999999999998 999999999999999999999999999988
Q ss_pred cccccCCCCCccccceeccccccccccccCCCC---CCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGER---PSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMT 868 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 868 (929)
+...... -.......+||+.|||||++.+.. ...++||||+||+..||.++.-+|..+...+.-+..-...
T Consensus 1384 i~~~~~~--~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~g---- 1457 (1509)
T KOG4645|consen 1384 IKNNAQT--MPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAG---- 1457 (1509)
T ss_pred ecCchhc--CCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhcc----
Confidence 7543211 112335678999999999997654 6788999999999999988888887776633211111111
Q ss_pred ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 869 SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..++.++.++..-++++.+|++.||++|.++.|+++
T Consensus 1458 ----h~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1458 ----HKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred ----CCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 122233345555556777999999999988876554
No 114
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.96 E-value=2e-30 Score=293.35 Aligned_cols=180 Identities=24% Similarity=0.278 Sum_probs=143.8
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||+|+||+||+++... ..+.+.+|++++++++|||||++++++.+ ..+
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-----~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQD-----AQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc-----CCe
Confidence 478889999999999999886541 12457789999999999999999999854 345
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.|+||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~ 152 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFH 152 (377)
T ss_pred eEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecccccccc
Confidence 899999999999999886432 3467899999999998 99999999999999999999999999996432
Q ss_pred cccCCC----------CC-------------------------------ccccceeccccccccccccCCCCCCCCCCCC
Q 002376 794 ERVDNQ----------SS-------------------------------ISSTHVFMGSIGYVPPEYGLGERPSTAGDVP 832 (929)
Q Consensus 794 ~~~~~~----------~~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~ 832 (929)
...... .. .......+||+.|||||++.+..++.++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 232 (377)
T cd05629 153 KQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWW 232 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeE
Confidence 110000 00 0000124799999999999999999999999
Q ss_pred CCcCCCCCcchhHHhh
Q 002376 833 TSESFAGEFNIVKWVE 848 (929)
Q Consensus 833 s~g~~~~~~~~~~~~~ 848 (929)
|+|++++++.++..++
T Consensus 233 SlGvil~elltG~~Pf 248 (377)
T cd05629 233 SLGAIMFECLIGWPPF 248 (377)
T ss_pred ecchhhhhhhcCCCCC
Confidence 9999999987665544
No 115
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.96 E-value=1.7e-30 Score=288.57 Aligned_cols=226 Identities=19% Similarity=0.204 Sum_probs=165.7
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||+|+||+||+++... ..+.+.+|+.+++.++||||+++++++.. ...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~-----~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQD-----KDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEec-----CCe
Confidence 468889999999999999887541 23457789999999999999999998854 335
Q ss_pred EEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 152 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARL 152 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeEC
Confidence 899999999999999986431 2356899999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccC------CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhccChHHH
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGL------GERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQVLDPELR 864 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~ 864 (929)
.... ........||+.|+|||++. +..++.++||||+|+++|++.++..++..... ....+....
T Consensus 153 ~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~-- 225 (330)
T cd05601 153 TANK-----MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQ-- 225 (330)
T ss_pred CCCC-----ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCC--
Confidence 3211 11122347899999999987 45688999999999999998766655433221 111111100
Q ss_pred HhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 865 QLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
... ...........+ .+++.+|++ +|++||++.+++.
T Consensus 226 ~~~--~~~~~~~~~~~~----~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 226 RFL--KFPEDPKVSSDF----LDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred Ccc--CCCCCCCCCHHH----HHHHHHHcc-ChhhCCCHHHHhC
Confidence 000 000001111222 236669997 9999999999874
No 116
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.96 E-value=2e-30 Score=286.34 Aligned_cols=215 Identities=25% Similarity=0.293 Sum_probs=158.7
Q ss_pred eeecccCceeEEecccc---------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEE
Q 002376 667 NLIGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV 725 (929)
+.||+|+||.||+++.. .....+.+|++++++++||||+++++++.+ ....|+|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT-----EGKLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc-----CCEEEEE
Confidence 57999999999976542 112346689999999999999999999854 3358999
Q ss_pred EEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 726 YEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
|||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 77 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~-- 151 (318)
T cd05582 77 LDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH-- 151 (318)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCC--
Confidence 99999999998886432 3367899999999998 9999999999999999999999999998754211
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQL 877 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 877 (929)
........||+.|||||++.+..++.++||||+|++++++..+..++..... .+.. ..........
T Consensus 152 ----~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~--~~~~----~~i~~~~~~~---- 217 (318)
T cd05582 152 ----EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR--KETM----TMILKAKLGM---- 217 (318)
T ss_pred ----CCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH--HHHH----HHHHcCCCCC----
Confidence 1112345799999999999998899999999999999998765544432211 1111 1111111111
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCHHH
Q 002376 878 HDCLITIIGSVGLSCTTESPGGRIGIRE 905 (929)
Q Consensus 878 ~~~~~~~~~~l~~~Cl~~dP~~RPs~~e 905 (929)
+..+..-+++++.+|++.||++||++.+
T Consensus 218 p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 218 PQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 1112222334777999999999999655
No 117
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.96 E-value=5.6e-31 Score=296.40 Aligned_cols=232 Identities=20% Similarity=0.225 Sum_probs=166.5
Q ss_pred HhhCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCC
Q 002376 658 RATGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 658 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 718 (929)
...++|+..+.||+|+||.||+++... ..+.+.+|+.+++.++||||+++++++.+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~----- 114 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQD----- 114 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEec-----
Confidence 345688999999999999999887641 12346789999999999999999998854
Q ss_pred cceEEEEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
....|+||||+++|+|.++++... .++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~ 191 (370)
T cd05596 115 DKYLYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMK 191 (370)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceee
Confidence 345899999999999999886432 2357899999999998 999999999999999999999999999986
Q ss_pred cccccCCCCCccccceeccccccccccccCCC----CCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhh
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGE----RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLM 867 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 867 (929)
..... .......+||+.|||||++.+. .++.++||||+|+++|++..+..++..... ... .....
T Consensus 192 ~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~--~~~----~~~i~ 260 (370)
T cd05596 192 MDANG-----MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--VGT----YSKIM 260 (370)
T ss_pred ccCCC-----cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH--HHH----HHHHH
Confidence 53211 1112335799999999998654 378999999999888776554444332211 000 01111
Q ss_pred cccchhhhhhhHHHHHHHHHHhccccCCCCCC--CCCHHHHHH
Q 002376 868 TSNESQTIQLHDCLITIIGSVGLSCTTESPGG--RIGIREALR 908 (929)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPs~~ev~~ 908 (929)
........+....++..+++++.+|++.+|++ ||++.|+++
T Consensus 261 ~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 261 DHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred cCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 00000000000011223334777999999988 999999964
No 118
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.96 E-value=1.1e-30 Score=282.85 Aligned_cols=232 Identities=18% Similarity=0.280 Sum_probs=167.2
Q ss_pred CCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
++|+..++||+|+||.||+|.... ..++|.+|++++++++||||+++++++... ...+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 75 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVE-----NRIS 75 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC-----CEEE
Confidence 367788999999999999987531 135688999999999999999999998653 3479
Q ss_pred EEEEecCCCCcccccc----ccccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCC
Q 002376 724 LVYEFLSNGSLGDWIH----GERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~----~~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~ 799 (929)
+||||+++|+|..+.+ ....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 76 lv~e~~~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---- 148 (279)
T cd06619 76 ICTEFMDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---- 148 (279)
T ss_pred EEEecCCCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc----
Confidence 9999999999976543 1224578999999999998 9999999999999999999999999999765211
Q ss_pred CCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhH
Q 002376 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHD 879 (929)
Q Consensus 800 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 879 (929)
......||..|+|||++.+..++.++||||+|++++++..+..++............................. .
T Consensus 149 ----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 223 (279)
T cd06619 149 ----IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPV-G 223 (279)
T ss_pred ----cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCC-C
Confidence 12335789999999999999999999999999888876655554432221100001111111100000000000 0
Q ss_pred HHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 880 CLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 880 ~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
.....+.+++.+|++.+|++||+++|+++.
T Consensus 224 ~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 224 QFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred cCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 111122347779999999999999998754
No 119
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.96 E-value=1.8e-30 Score=279.22 Aligned_cols=232 Identities=21% Similarity=0.258 Sum_probs=169.0
Q ss_pred CCCCCceeecccCceeEEecccc--------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT--------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~--------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
++|+..+.||+|+||+||+|++. ...++|.+|+.++++++||||+++++++... .
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 78 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKS-----R 78 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecC-----C
Confidence 56888999999999999998652 1234688999999999999999999988543 3
Q ss_pred eEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..++||||+++|+|.+++.... .++.+++.|++|||+. +|+||||||+||++++++.+|++|||+++.
T Consensus 79 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~ 155 (266)
T cd05033 79 PVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRR 155 (266)
T ss_pred ceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhc
Confidence 3799999999999999986422 2357899999999997 999999999999999999999999999987
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
...... ........+++.|+|||.+.+..++.++||||+|++++++.+ ...++.... +..+.......
T Consensus 156 ~~~~~~----~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~-------~~~~~~~~~~~ 224 (266)
T cd05033 156 LEDSEA----TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS-------NQDVIKAVEDG 224 (266)
T ss_pred cccccc----ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC-------HHHHHHHHHcC
Confidence 631111 011112245678999999999999999999999988777432 222221111 11111111110
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
... .......+.+.+++.+||+.+|++||+++|+++.|+++
T Consensus 225 ~~~--~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 225 YRL--PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCC--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000 00011122333488899999999999999999999875
No 120
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=1.1e-30 Score=286.77 Aligned_cols=236 Identities=20% Similarity=0.332 Sum_probs=169.5
Q ss_pred hCCCCCceeecccCceeEEecccc------------------------CcHHHHHHHHHHHHcc-CCccccceeeecccC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT------------------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSL 714 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~------------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~ 714 (929)
.++|...+.||+|+||.||+++.. ...+++.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 456788899999999999987521 1124678899999999 899999999998543
Q ss_pred CCCCcceEEEEEEecCCCCccccccccc------------------------cccccHHHHHHHhhhCCCCCEEecCCCC
Q 002376 715 DSKNMEFLALVYEFLSNGSLGDWIHGER------------------------KNELDITSALDYLHNDCEVPVVHSDLKP 770 (929)
Q Consensus 715 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~------------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~ 770 (929)
...++||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||
T Consensus 94 -----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp 165 (304)
T cd05101 94 -----GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAA 165 (304)
T ss_pred -----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeeccccc
Confidence 34799999999999999986432 1245899999999998 999999999
Q ss_pred CCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhh
Q 002376 771 GNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVES 849 (929)
Q Consensus 771 ~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~ 849 (929)
+||++++++.+||+|||+++.+...... .......+++.|+|||++.+..++.++||||+|++++++.. ...++.
T Consensus 166 ~Nili~~~~~~kl~D~g~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 241 (304)
T cd05101 166 RNVLVTENNVMKIADFGLARDVNNIDYY----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 241 (304)
T ss_pred ceEEEcCCCcEEECCCccceeccccccc----ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcc
Confidence 9999999999999999999865321111 11122346778999999999899999999999987766432 111111
Q ss_pred cCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 850 NLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 850 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
..+ ..+. ........... ....+...+ .+++.+||+.+|++||+|.|+++.|+++...
T Consensus 242 ~~~--~~~~-----~~~~~~~~~~~-~~~~~~~~~-~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 242 GIP--VEEL-----FKLLKEGHRMD-KPANCTNEL-YMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred cCC--HHHH-----HHHHHcCCcCC-CCCCCCHHH-HHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 111 1111 11111110000 001112223 3377899999999999999999999988764
No 121
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.96 E-value=3.1e-30 Score=277.43 Aligned_cols=234 Identities=22% Similarity=0.299 Sum_probs=171.2
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||+|+||.||+|+... ....|.+|+++++.++||||+++++++.+. ..
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED-----NE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC-----Ce
Confidence 578889999999999999987531 124678999999999999999999998643 34
Q ss_pred EEEEEEecCCCCcccccccc------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGE------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
.++||||+++|+|.+++... ..++.+++.||+|||+. +++||||||+||+++.++.++|+|||++
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~ 153 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLG 153 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccc
Confidence 79999999999999877421 12356899999999998 9999999999999999999999999998
Q ss_pred cccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcc
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTS 869 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 869 (929)
+...... .......|++.|+|||++.+..++.++||||+|++++++.....++........ .+......
T Consensus 154 ~~~~~~~------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~-----~~~~~~~~ 222 (267)
T cd08228 154 RFFSSKT------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF-----SLCQKIEQ 222 (267)
T ss_pred eeccchh------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH-----HHHHHHhc
Confidence 8653211 111234688999999999988899999999999877765443332211110111 11111111
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQ 914 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~ 914 (929)
... .....+.....+.+++.+||+.+|++||++.||++.+++++
T Consensus 223 ~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 223 CDY-PPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred CCC-CCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 000 00111122233445888999999999999999999999864
No 122
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.96 E-value=2.4e-30 Score=286.86 Aligned_cols=220 Identities=25% Similarity=0.281 Sum_probs=156.6
Q ss_pred eeecccCceeEEeccccC-------------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcceEEEEE
Q 002376 667 NLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
+.||+|+||.||+++... ..+.+.+|+.++.++ +||||+++++++... ...++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~-----~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE-----SRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeC-----CEEEEEE
Confidence 469999999999987541 123466788888776 899999999998543 3589999
Q ss_pred EecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 727 EFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 76 E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~--- 149 (329)
T cd05618 76 EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--- 149 (329)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCC---
Confidence 9999999988875432 3467899999999998 9999999999999999999999999998753211
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-h-hhhccChHHHHhhcccchhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-N-VLQVLDPELRQLMTSNESQTIQ 876 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~-~~~~~~~~l~~~~~~~~~~~~~ 876 (929)
........||+.|+|||++.+..++.++||||+|++++++..+..++..... . ........+........ ..
T Consensus 150 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~---~~ 223 (329)
T cd05618 150 ---GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ---IR 223 (329)
T ss_pred ---CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC---CC
Confidence 1112345799999999999999999999999999888887666555432111 0 00000011111111100 01
Q ss_pred hhHHHHHHHHHHhccccCCCCCCCCCH
Q 002376 877 LHDCLITIIGSVGLSCTTESPGGRIGI 903 (929)
Q Consensus 877 ~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 903 (929)
.+..+...+++++.+|++.||++||++
T Consensus 224 ~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 224 IPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 111122223347779999999999984
No 123
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.96 E-value=1.4e-30 Score=283.31 Aligned_cols=243 Identities=23% Similarity=0.246 Sum_probs=174.0
Q ss_pred CChHHHHHhhCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHcc-CCccccceeeecccC
Q 002376 651 ISYDELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNV-RHRNLVKLITSCSSL 714 (929)
Q Consensus 651 ~~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~ 714 (929)
+.++++.++.++|+..+.||+|+||.||++.... ...++.+|+.+++++ +||||+++++++...
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 5567777889999999999999999999986541 135678899999999 699999999998655
Q ss_pred CCCCcceEEEEEEecCCCCcccccccc----c--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceE
Q 002376 715 DSKNMEFLALVYEFLSNGSLGDWIHGE----R--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAK 782 (929)
Q Consensus 715 ~~~~~~~~~lV~e~~~~gsL~~~l~~~----~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 782 (929)
+.......++||||+++|+|.++++.. . ..+.|++.|+.|||+. +|+|||+||+||++++++.+|
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~k 164 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVK 164 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEE
Confidence 444455689999999999999876421 1 1356899999999998 999999999999999999999
Q ss_pred EeccccccccccccCCCCCccccceeccccccccccccCC-----CCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhh
Q 002376 783 VGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG-----ERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQ 857 (929)
Q Consensus 783 i~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~ 857 (929)
++|||+++.+.... .......|++.|+|||++.. ..++.++||||+|++++++.....++..... ...
T Consensus 165 l~dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~-~~~ 237 (286)
T cd06638 165 LVDFGVSAQLTSTR------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP-MRA 237 (286)
T ss_pred EccCCceeecccCC------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch-hHH
Confidence 99999998653211 11223468999999998753 4578999999999887776544333222111 011
Q ss_pred ccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 858 VLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 858 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
... ... ........+....+-+.+++.+||+.||++||++.|+++.
T Consensus 238 ~~~--~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 238 LFK--IPR----NPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred Hhh--ccc----cCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 000 000 0000000000011122337779999999999999999864
No 124
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.96 E-value=6.1e-30 Score=277.91 Aligned_cols=240 Identities=23% Similarity=0.325 Sum_probs=168.8
Q ss_pred CCCCceeecccCceeEEecccc---------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 662 NFSHENLIGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.|+..+.||+|+||.||.+++. ...+.+.+|++++++++|||++++++++...+ ..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG---GN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCC---CC
Confidence 4677889999999999987521 11357889999999999999999999886532 23
Q ss_pred eEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..++||||+++++|.+++.... .++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccccc
Confidence 4799999999999999885322 2356899999999998 999999999999999999999999999986
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhcc--------ChH
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVL--------DPE 862 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~--------~~~ 862 (929)
+...... ........|+..|+|||++.+..++.++||||+|++++++.+...+.. .+. ...+.. ...
T Consensus 159 ~~~~~~~---~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd05079 159 IETDKEY---YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSES-SPMTLFLKMIGPTHGQMTVTR 234 (284)
T ss_pred cccCccc---eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCc-cccchhhhhcccccccccHHH
Confidence 5322110 011123457778999999998899999999999999988654211100 000 000000 000
Q ss_pred HHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 863 LRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 863 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
......... .......+..++. +++.+|++.+|++||++.|+++.++++
T Consensus 235 ~~~~~~~~~-~~~~~~~~~~~~~-~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 235 LVRVLEEGK-RLPRPPNCPEEVY-QLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHHcCc-cCCCCCCCCHHHH-HHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 000000000 0000011122333 388899999999999999999999875
No 125
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.96 E-value=2.5e-30 Score=290.96 Aligned_cols=180 Identities=24% Similarity=0.264 Sum_probs=144.5
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||+|+||+||+++... ..+.+.+|+.++.+++||||+++++++.+ ...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~-----~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQD-----KLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEec-----CCe
Confidence 478889999999999999987641 12356789999999999999999999854 335
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.|+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~ 152 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLK 152 (363)
T ss_pred EEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCccccc
Confidence 899999999999999886432 3467899999999998 99999999999999999999999999998653
Q ss_pred cccCCC-----------------------------CCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchh
Q 002376 794 ERVDNQ-----------------------------SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIV 844 (929)
Q Consensus 794 ~~~~~~-----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~ 844 (929)
...... .........+||+.|||||++.+..++.++||||+|+++|++.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G 232 (363)
T cd05628 153 KAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232 (363)
T ss_pred ccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhC
Confidence 211000 000011245799999999999999999999999999888887665
Q ss_pred HHhh
Q 002376 845 KWVE 848 (929)
Q Consensus 845 ~~~~ 848 (929)
..++
T Consensus 233 ~~Pf 236 (363)
T cd05628 233 YPPF 236 (363)
T ss_pred CCCC
Confidence 5544
No 126
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.96 E-value=1.4e-30 Score=279.28 Aligned_cols=231 Identities=24% Similarity=0.340 Sum_probs=168.4
Q ss_pred hCCCCCceeecccCceeEEeccccC--------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG--------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~--------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV 725 (929)
.++|+..+.||+|+||.||+|.... ..++|.+|++++++++||||+++++++... ...++|
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv 79 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLE-----EPIYIV 79 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecC-----CCeeee
Confidence 4568888999999999999987531 246789999999999999999999988543 347999
Q ss_pred EEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 726 YEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
|||+++++|.+++.... .++.+++.|++|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 80 TELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKED 156 (261)
T ss_pred eecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCC
Confidence 99999999999986432 2356899999999998 8999999999999999999999999999876421
Q ss_pred cCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQT 874 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 874 (929)
.. .......++..|+|||++.+..++.++||||+|++++++.. ...++..... . .+..........
T Consensus 157 ~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~-----~~~~~~~~~~~~- 223 (261)
T cd05068 157 IY-----EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN--A-----EVLQQVDQGYRM- 223 (261)
T ss_pred cc-----cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH--H-----HHHHHHHcCCCC-
Confidence 10 01111233468999999999999999999999987776543 2222211111 1 111111000000
Q ss_pred hhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 875 IQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 875 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
.........+.+++.+|++.+|++||+|.++.+.|++
T Consensus 224 -~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 224 -PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred -CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 0001111223337789999999999999999999986
No 127
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.96 E-value=2.9e-30 Score=289.45 Aligned_cols=232 Identities=22% Similarity=0.227 Sum_probs=169.7
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||+|+||.||+|+... ..+.+.+|+++++.++||||+++++++.+ ...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQD-----EEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheec-----CCe
Confidence 468889999999999999987651 23457889999999999999999998854 335
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 152 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMN 152 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCc
Confidence 899999999999999886432 2367899999999997 99999999999999999999999999998654
Q ss_pred cccCC-----------------------CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhc
Q 002376 794 ERVDN-----------------------QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESN 850 (929)
Q Consensus 794 ~~~~~-----------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~ 850 (929)
..... ...........||+.|+|||++.+..++.++||||+|++++++..+..++..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~ 232 (350)
T cd05573 153 KAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYS 232 (350)
T ss_pred ccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCC
Confidence 32100 0000112345799999999999999999999999999999987766555433
Q ss_pred CCc--hhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCC-HHHHHHH
Q 002376 851 LPE--NVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIG-IREALRR 909 (929)
Q Consensus 851 ~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-~~ev~~~ 909 (929)
... ....+.........+ .... +...+.+++.+|+. ||++||+ ++|+++.
T Consensus 233 ~~~~~~~~~i~~~~~~~~~p----~~~~----~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 233 DTLQETYNKIINWKESLRFP----PDPP----VSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CCHHHHHHHHhccCCcccCC----CCCC----CCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 221 111111100000000 0000 11222336669997 9999999 9999863
No 128
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.96 E-value=1.2e-30 Score=280.63 Aligned_cols=234 Identities=23% Similarity=0.303 Sum_probs=171.7
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||+|+||.||++.... ..++|.+|+.+++.++||||+++++++... ..
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED-----NE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeC-----Ce
Confidence 467788999999999999987531 124678899999999999999999998643 34
Q ss_pred EEEEEEecCCCCcccccccc------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGE------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
.++||||+++++|.++++.. ..++.+++.|++|||+. +++|+||||+||+++.++.+|++|||++
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~ 153 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLG 153 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhh
Confidence 89999999999999887521 12256899999999998 9999999999999999999999999998
Q ss_pred cccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcc
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTS 869 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 869 (929)
+...... .......|+..|+|||++.+..++.++||||+|++++++.....++........+... .+...
T Consensus 154 ~~~~~~~------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~--- 223 (267)
T cd08229 154 RFFSSKT------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK-KIEQC--- 223 (267)
T ss_pred hccccCC------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhh-hhhcC---
Confidence 8653211 1122346899999999999889999999999998877765444333211111111111 11110
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQ 914 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~ 914 (929)
. ............+++++.+||+.||++||||.+|++.++++.
T Consensus 224 ~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 224 D--YPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred C--CCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 0 000011122333444777999999999999999999998864
No 129
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=7.2e-31 Score=299.82 Aligned_cols=242 Identities=19% Similarity=0.228 Sum_probs=173.6
Q ss_pred CCCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccC-Cccccceee-ecccCCCCC-cceE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVR-HRNLVKLIT-SCSSLDSKN-MEFL 722 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~-Hpniv~l~~-~~~~~~~~~-~~~~ 722 (929)
++++.++|.+|||+.||.+...+ ..+...+||++|++++ |||||.+++ ........+ ..++
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 44567899999999999987653 2456789999999997 999999999 443333333 4678
Q ss_pred EEEEEecCCCCcccccccc----------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGE----------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~----------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
+|.||||++|+|-|++..+ .++..|+|+|+++||.. .++|||||||-+||||+.++..||||||-|.-.
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~ 196 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATTK 196 (738)
T ss_pred EeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccccc
Confidence 9999999999999998732 24567999999999996 789999999999999999999999999987632
Q ss_pred ccccCCCCCc---cccceecccccccccccc---CCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHh
Q 002376 793 LERVDNQSSI---SSTHVFMGSIGYVPPEYG---LGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQL 866 (929)
Q Consensus 793 ~~~~~~~~~~---~~~~~~~gt~~y~aPE~~---~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 866 (929)
.......... ...-....|+.|+|||++ .+..+++|+|||++||++|.+..+..++..... ..+++....
T Consensus 197 ~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~--laIlng~Y~-- 272 (738)
T KOG1989|consen 197 ILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK--LAILNGNYS-- 272 (738)
T ss_pred cCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc--eeEEecccc--
Confidence 1111000000 001122469999999975 567799999999999877765544444432211 122222211
Q ss_pred hcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 867 MTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
++. .+. ....+++|+..||++||++||++.+|+..+-++...
T Consensus 273 ~P~----~p~----ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 273 FPP----FPN----YSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred CCC----Ccc----HHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 111 011 223334477799999999999999999998887654
No 130
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.96 E-value=1.3e-30 Score=278.68 Aligned_cols=229 Identities=24% Similarity=0.340 Sum_probs=166.5
Q ss_pred CCCCCceeecccCceeEEeccccC--------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG--------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~--------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
++|+..+.||+|+||.||+|++.+ ..++|.+|++++++++||||+++++++...+ ..++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~ 78 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQR-----PIYIVT 78 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCC-----CcEEEE
Confidence 356778899999999999886531 2457899999999999999999999985433 379999
Q ss_pred EecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 727 EFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
||+++|+|.+++.... .++.||+.|++|||+. +++||||||+||++++++.+||+|||.++......
T Consensus 79 e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~- 154 (256)
T cd05113 79 EYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE- 154 (256)
T ss_pred EcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCc-
Confidence 9999999999886422 2367899999999998 99999999999999999999999999988653211
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTIQ 876 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 876 (929)
........++..|+|||++.+..++.++||||+|++++++.. ...++..... .+..+. +.... .....
T Consensus 155 ----~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--~~~~~~-~~~~~---~~~~~- 223 (256)
T cd05113 155 ----YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN--SETVEK-VSQGL---RLYRP- 223 (256)
T ss_pred ----eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH--HHHHHH-HhcCC---CCCCC-
Confidence 011112245678999999998889999999999988877643 3333322221 111111 11100 00000
Q ss_pred hhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 002376 877 LHDCLITIIGSVGLSCTTESPGGRIGIREALRRLK 911 (929)
Q Consensus 877 ~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 911 (929)
......+.+++.+||+.+|++||++.++++.|+
T Consensus 224 --~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 224 --HLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred --CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 011122233777999999999999999998764
No 131
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.96 E-value=8e-31 Score=271.72 Aligned_cols=240 Identities=23% Similarity=0.305 Sum_probs=168.4
Q ss_pred CCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCcc-ccceeeecccCCC-CCcce
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRN-LVKLITSCSSLDS-KNMEF 721 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpn-iv~l~~~~~~~~~-~~~~~ 721 (929)
.|...++||+|+||+||+|+... ......+|+.++++++|+| ||++++++.+.+. .....
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 45556789999999999998761 2234579999999999999 9999999976542 22346
Q ss_pred EEEEEEecCCCCccccccccc------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
.++|+||++ -+|.+++.... .+..|+++||+|||++ +|+||||||.||||+++|.+||+|||+|
T Consensus 92 l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 92 LYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred EEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccchH
Confidence 899999995 58888886433 2367999999999999 9999999999999999999999999999
Q ss_pred cccccccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhhhcCCc---------------
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVESNLPE--------------- 853 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--------------- 853 (929)
+...-. ....+..++|..|+|||++.+. .|++..||||.||+..|+....-.+....+
T Consensus 168 ra~~ip------~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~ 241 (323)
T KOG0594|consen 168 RAFSIP------MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPN 241 (323)
T ss_pred HHhcCC------cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCC
Confidence 965311 1224456889999999999988 699999999999887665332221111111
Q ss_pred --hhhhccC-hHHHHhhcccchhhhhhhHHH----HHHHHHHhccccCCCCCCCCCHHHHHHH--HHhh
Q 002376 854 --NVLQVLD-PELRQLMTSNESQTIQLHDCL----ITIIGSVGLSCTTESPGGRIGIREALRR--LKSS 913 (929)
Q Consensus 854 --~~~~~~~-~~l~~~~~~~~~~~~~~~~~~----~~~~~~l~~~Cl~~dP~~RPs~~ev~~~--L~~~ 913 (929)
.+..+.. ++....++.... .......+ ....+ ++.+|++.+|.+|.|++.++.. +.++
T Consensus 242 e~~Wp~v~~~~~~k~~f~~~~~-~~~l~~~~~~~~~~~~d-ll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 242 EKDWPGVSSLPDYKAPFPKWPG-PKDLSSILPKLDPDGIE-LLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred ccCCCCccccccccccCcCCCC-ccchHHhccccCccHHH-HHHHHhccCcccCcCHHHHhcChhhccc
Confidence 1111110 000100000000 00001111 12333 7789999999999999999876 5554
No 132
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=1e-30 Score=298.76 Aligned_cols=171 Identities=21% Similarity=0.290 Sum_probs=140.9
Q ss_pred hCCCCCceeecccCceeEEeccccCc----------HHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEec
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTGS----------WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFL 729 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~~----------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~ 729 (929)
..+|...+.||+|+||.||++.+... ...+.+|++++++++|||||++++++... +..++||||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~~~~~E~~iL~~L~HpnIv~l~~~~~~~-----~~~~lv~e~~ 242 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWYASSVHEARLLRRLSHPAVLALLDVRVVG-----GLTCLVLPKY 242 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccccCHHHHHHHHHHCCCCCCCcEEEEEEEC-----CEEEEEEEcc
Confidence 45799999999999999999987632 23567899999999999999999998543 3479999999
Q ss_pred CCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCC
Q 002376 730 SNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQS 800 (929)
Q Consensus 730 ~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 800 (929)
. |+|.+++... ..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 243 ~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~--- 315 (461)
T PHA03211 243 R-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS--- 315 (461)
T ss_pred C-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceecccccc---
Confidence 4 7888887532 23467899999999998 999999999999999999999999999986532111
Q ss_pred CccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch
Q 002376 801 SISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI 843 (929)
Q Consensus 801 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~ 843 (929)
........||+.|||||++.+..++.++||||+|+++|++.+
T Consensus 316 -~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~ 357 (461)
T PHA03211 316 -TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAV 357 (461)
T ss_pred -cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHH
Confidence 111224579999999999999999999999999999888644
No 133
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.96 E-value=2.1e-30 Score=279.20 Aligned_cols=228 Identities=24% Similarity=0.290 Sum_probs=156.5
Q ss_pred eeecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEE
Q 002376 667 NLIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYE 727 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e 727 (929)
+.||+|+||.||+|+.. .....|.+|+.++++++||||+++++++.+.. ..++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVT-----PYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC-----CcEEEEE
Confidence 35899999999998532 01246888999999999999999999985433 3799999
Q ss_pred ecCCCCccccccccc-------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 728 FLSNGSLGDWIHGER-------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 728 ~~~~gsL~~~l~~~~-------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
|+++|+|.++++..+ ..+.|++.|++|||+. +++||||||+||++++++.+|++|||+++....
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~ 152 (269)
T cd05087 76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYK 152 (269)
T ss_pred CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccC
Confidence 999999999886321 2356899999999998 999999999999999999999999999875321
Q ss_pred ccCCCCCccccceeccccccccccccCCC-------CCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGE-------RPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQL 866 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~ 866 (929)
. ..........|+..|+|||++.+. .++.++||||+|++++++.. ...++..... .+.........
T Consensus 153 ~----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~ 226 (269)
T cd05087 153 E----DYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSD--EQVLTYTVREQ 226 (269)
T ss_pred c----ceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCCh--HHHHHHHhhcc
Confidence 1 001112234578899999998642 35889999999988777542 3333322211 01000000000
Q ss_pred hcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 002376 867 MTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLK 911 (929)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 911 (929)
..... .+.......+.+.+++.+|| .+|++|||++||++.|+
T Consensus 227 ~~~~~--~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 227 QLKLP--KPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred cCCCC--CCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 00000 00000011222334777999 58999999999998875
No 134
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.96 E-value=7.8e-30 Score=279.66 Aligned_cols=232 Identities=23% Similarity=0.293 Sum_probs=168.5
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~ 720 (929)
++|+..+.||+|+||.||+|.+.. ..+.|.+|++++.++ +||||+++++++... .
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~-----~ 81 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR-----G 81 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC-----C
Confidence 467788999999999999996431 124678899999999 899999999998543 3
Q ss_pred eEEEEEEecCCCCccccccccc------------------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeec
Q 002376 721 FLALVYEFLSNGSLGDWIHGER------------------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLD 776 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~------------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~ 776 (929)
..|+||||+++|+|.++++..+ .++.|++.|++|||+. +|+||||||+|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~ 158 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVG 158 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEec
Confidence 4899999999999999886321 2356899999999998 999999999999999
Q ss_pred CCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchh
Q 002376 777 EEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENV 855 (929)
Q Consensus 777 ~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~ 855 (929)
+++.+||+|||+++..... .......++..|+|||++.+..++.++||||+|++++++.+ ...++.....
T Consensus 159 ~~~~~kl~dfg~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-- 229 (303)
T cd05088 159 ENYVAKIADFGLSRGQEVY-------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-- 229 (303)
T ss_pred CCCcEEeCccccCcccchh-------hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh--
Confidence 9999999999998642111 01111234678999999988889999999999988887653 3322211111
Q ss_pred hhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 856 LQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 856 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
.+ .......... ...+......+.+++.+||+.+|++||+++++++.++++.+.
T Consensus 230 ~~-----~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 230 AE-----LYEKLPQGYR--LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred HH-----HHHHHhcCCc--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11 1111111000 000001112233478899999999999999999999987665
No 135
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.96 E-value=1.6e-30 Score=282.60 Aligned_cols=225 Identities=25% Similarity=0.306 Sum_probs=164.4
Q ss_pred CCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
+|+..++||+|+||+||++.... ..+.+.+|+.++++++||||+++++++... ...
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK-----DAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCC-----CeE
Confidence 47778999999999999987541 113467899999999999999999998543 348
Q ss_pred EEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
++||||+++|+|.+++.... .++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~ 152 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEI 152 (285)
T ss_pred EEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceec
Confidence 99999999999998875321 2357899999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhcccc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~ 871 (929)
... .......|++.|||||++.+..++.++||||+|+++|++..+..++..... ...+.+...+.. ..
T Consensus 153 ~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~----~~ 221 (285)
T cd05605 153 PEG-------ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE----DQ 221 (285)
T ss_pred CCC-------CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh----cc
Confidence 311 111234789999999999998999999999999887776554443332211 000111111111 00
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRI-----GIREALR 908 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 908 (929)
...+..+...+++++.+||+.||++|| +++++++
T Consensus 222 ---~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 222 ---EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred ---cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 011112233344477899999999999 7888865
No 136
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.96 E-value=8.6e-31 Score=287.38 Aligned_cols=174 Identities=25% Similarity=0.334 Sum_probs=139.0
Q ss_pred hCCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
.++|+..+.||+|+||.||+|+... ....+.+|+.+++.++||||+++++++.+. ...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~ 78 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTK-----ETL 78 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecC-----CeE
Confidence 4689999999999999999987641 123577899999999999999999998543 358
Q ss_pred EEEEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
++||||++ ++|.+++... +.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 79 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 154 (303)
T cd07869 79 TLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKS 154 (303)
T ss_pred EEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceecc
Confidence 99999995 6787776532 23367899999999998 99999999999999999999999999987542
Q ss_pred cccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
.. ........||+.|||||++.+. .++.++||||+|++++++..+..++
T Consensus 155 ~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf 204 (303)
T cd07869 155 VP------SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAF 204 (303)
T ss_pred CC------CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 11 0112234689999999998764 5789999999998888765554444
No 137
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.96 E-value=1.6e-30 Score=292.57 Aligned_cols=238 Identities=20% Similarity=0.252 Sum_probs=169.0
Q ss_pred hHHHHHhhCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeeccc
Q 002376 653 YDELRRATGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSS 713 (929)
Q Consensus 653 ~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~ 713 (929)
..++....++|+..+.||+|+||.||+++... ..+.+.+|+.+++.++||||+++++++..
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 44556667899999999999999999887651 12346789999999999999999999853
Q ss_pred CCCCCcceEEEEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecc
Q 002376 714 LDSKNMEFLALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDF 786 (929)
Q Consensus 714 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~Df 786 (929)
....++||||+++|+|.++++... .++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 115 -----~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~Df 186 (371)
T cd05622 115 -----DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 186 (371)
T ss_pred -----CCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeC
Confidence 345899999999999999886432 3367899999999998 9999999999999999999999999
Q ss_pred ccccccccccCCCCCccccceeccccccccccccCCCC----CCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChH
Q 002376 787 GLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER----PSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE 862 (929)
Q Consensus 787 Gla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (929)
|+++.+... ........+||+.|||||++.+.. ++.++||||+|+++|++..+..++..... ....
T Consensus 187 G~a~~~~~~-----~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--~~~~--- 256 (371)
T cd05622 187 GTCMKMNKE-----GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--VGTY--- 256 (371)
T ss_pred CceeEcCcC-----CcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH--HHHH---
Confidence 999865321 111123457999999999987543 78999999999888887655544432221 1111
Q ss_pred HHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCC--CCCHHHHHHH
Q 002376 863 LRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGG--RIGIREALRR 909 (929)
Q Consensus 863 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPs~~ev~~~ 909 (929)
.................+...+++++.+|+..++.+ ||+++|+.+.
T Consensus 257 -~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 257 -SKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred -HHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 111100000000000112233344777999743433 7788888764
No 138
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.96 E-value=9.7e-31 Score=284.66 Aligned_cols=171 Identities=26% Similarity=0.371 Sum_probs=138.0
Q ss_pred CCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
++|...++||+|+||.||+|+... ....+.+|++++++++||||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~~ 79 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHT-----ERCLT 79 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcC-----CCeEE
Confidence 578889999999999999986541 13467799999999999999999999854 33589
Q ss_pred EEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
+||||++ |+|.+++.... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 80 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~ 155 (288)
T cd07871 80 LVFEYLD-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSV 155 (288)
T ss_pred EEEeCCC-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccC
Confidence 9999997 58988775322 2357899999999998 999999999999999999999999999975421
Q ss_pred ccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHH
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKW 846 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~ 846 (929)
. ........|++.|+|||++.+ ..++.++||||+|++++++.+...
T Consensus 156 ~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~ 202 (288)
T cd07871 156 P------TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRP 202 (288)
T ss_pred C------CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCC
Confidence 1 111223468999999998876 468999999999988887655543
No 139
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.96 E-value=1e-30 Score=284.51 Aligned_cols=234 Identities=19% Similarity=0.255 Sum_probs=169.0
Q ss_pred hhCCCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHccCCccccceeeecccCCC
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDS 716 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~ 716 (929)
..++|+..+.||+|+||.||+|..+ .....+.+|+.++++++||||+++++++...+
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 82 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ- 82 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-
Confidence 4568899999999999999987432 01235778999999999999999999985433
Q ss_pred CCcceEEEEEEecCCCCccccccccc------------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC
Q 002376 717 KNMEFLALVYEFLSNGSLGDWIHGER------------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE 778 (929)
Q Consensus 717 ~~~~~~~lV~e~~~~gsL~~~l~~~~------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~ 778 (929)
..++||||+++|+|.++++... .++.|++.||+|||+. +|+||||||+||+++++
T Consensus 83 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~ 155 (288)
T cd05061 83 ----PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHD 155 (288)
T ss_pred ----CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCC
Confidence 3799999999999999986321 2356899999999998 99999999999999999
Q ss_pred CceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhh
Q 002376 779 MTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQ 857 (929)
Q Consensus 779 ~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~ 857 (929)
+.+|++|||+++....... ........++..|+|||.+.+..++.++||||+|++++++.. ...++.... ..
T Consensus 156 ~~~~L~Dfg~~~~~~~~~~----~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~--~~- 228 (288)
T cd05061 156 FTVKIGDFGMTRDIYETDY----YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS--NE- 228 (288)
T ss_pred CcEEECcCCcccccccccc----ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCC--HH-
Confidence 9999999999986532111 011122345778999999999899999999999988877543 222221111 11
Q ss_pred ccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 858 VLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 858 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
............ ...+.....+++++.+|++.||++||||.|+++.+++.
T Consensus 229 ----~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 229 ----QVLKFVMDGGYL--DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred ----HHHHHHHcCCCC--CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 111111000000 00011122334477899999999999999999888874
No 140
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.96 E-value=6.5e-31 Score=281.75 Aligned_cols=233 Identities=24% Similarity=0.331 Sum_probs=171.1
Q ss_pred HhhCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 658 RATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 658 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
++.++|+..+.||+|+||.||+|.... ..+++.+|+++++.++||||+++++++...+ ..
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~ 77 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGE-----PV 77 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCC-----Ce
Confidence 445678888999999999999987642 2457889999999999999999999985433 47
Q ss_pred EEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
++||||+++|+|.++++... .++.+++.|++|||+. +|+||||||+||++++++.+||+|||.++..
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~ 154 (261)
T cd05148 78 YIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLI 154 (261)
T ss_pred EEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhc
Confidence 99999999999999986422 2356899999999998 8999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
.... .......++..|+|||++.+..++.++||||+|++++++.. ...++..... .+.++..... . ..
T Consensus 155 ~~~~------~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~--~~~~~~~~~~-~--~~ 223 (261)
T cd05148 155 KEDV------YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN--HEVYDQITAG-Y--RM 223 (261)
T ss_pred CCcc------ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH--HHHHHHHHhC-C--cC
Confidence 3211 11112345778999999988899999999999987776533 2222221111 1111111110 0 00
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
.... . ....+.+++.+||+.||++|||++++++.|+.+
T Consensus 224 ~~~~---~-~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 224 PCPA---K-CPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred CCCC---C-CCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 0011 1 112233488899999999999999999999863
No 141
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.96 E-value=3.4e-30 Score=299.43 Aligned_cols=226 Identities=21% Similarity=0.219 Sum_probs=166.0
Q ss_pred CCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
.|...+.||+|+||.||++.... ....+.+|+.+++.++|||||++++++... ...|+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~-----~~~~l 142 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSD-----DKLLL 142 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC-----CEEEE
Confidence 48888999999999999876431 123567899999999999999999998543 35899
Q ss_pred EEEecCCCCcccccccc------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 725 VYEFLSNGSLGDWIHGE------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
||||+++|+|.++++.. ..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.+
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~ 219 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQY 219 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceec
Confidence 99999999999877531 12356899999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
.... ........+||++|||||++.+..++.++||||+|++++++.....++.... ..+++......... .
T Consensus 220 ~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~--~~~~~~~~~~~~~~---~ 290 (478)
T PTZ00267 220 SDSV----SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS--QREIMQQVLYGKYD---P 290 (478)
T ss_pred CCcc----ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhCCCC---C
Confidence 3211 1112234579999999999999999999999999988777655443332111 11111111111100 0
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.... +..-+++++.+||+.||++||++++++.
T Consensus 291 ~~~~----~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 291 FPCP----VSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCcc----CCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 0011 1122333777999999999999999864
No 142
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.96 E-value=1.8e-30 Score=281.37 Aligned_cols=231 Identities=25% Similarity=0.352 Sum_probs=167.6
Q ss_pred CCCCCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCC
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 718 (929)
++|...+.||+|+||.||+|.... ..+.|.+|++++++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---- 80 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEG---- 80 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecC----
Confidence 457778999999999999986420 235788999999999999999999998654
Q ss_pred cceEEEEEEecCCCCccccccccc----------------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeec
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER----------------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLD 776 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~----------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~ 776 (929)
...++||||+++|+|.++++... .+..+++.|++|||+. +++||||||+||+++
T Consensus 81 -~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~ 156 (280)
T cd05049 81 -DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVG 156 (280)
T ss_pred -CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEc
Confidence 34899999999999999986321 1256899999999998 999999999999999
Q ss_pred CCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchh
Q 002376 777 EEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENV 855 (929)
Q Consensus 777 ~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~ 855 (929)
.++.+|++|||+++....... ........+++.|+|||++.+..++.++||||+|++++++.. ...++.... .
T Consensus 157 ~~~~~kl~d~g~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~--~ 230 (280)
T cd05049 157 YDLVVKIGDFGMSRDVYTTDY----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS--N 230 (280)
T ss_pred CCCeEEECCcccceecccCcc----eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC--H
Confidence 999999999999975422110 011122346788999999999999999999999988777543 222221111 1
Q ss_pred hhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 856 LQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 856 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
.+.++........ ... ......+.+++.+||+.||++||++.||+++|++
T Consensus 231 ~~~~~~~~~~~~~---~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 231 EEVIECITQGRLL---QRP----RTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHHHHHHcCCcC---CCC----CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 1111110000000 000 1112223347789999999999999999999863
No 143
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.96 E-value=3.1e-30 Score=284.93 Aligned_cols=213 Identities=24% Similarity=0.262 Sum_probs=155.4
Q ss_pred eeecccCceeEEeccccC-------------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcceEEEEE
Q 002376 667 NLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
+.||+|+||.||+++... ..+.+..|..++... +||||+++++++.. ....|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~-----~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQT-----PDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEc-----CCEEEEEE
Confidence 469999999999987641 123466788888876 69999999999854 33589999
Q ss_pred EecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 727 EFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 76 Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~--- 149 (320)
T cd05590 76 EFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN--- 149 (320)
T ss_pred cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC---
Confidence 9999999998886433 2367899999999998 9999999999999999999999999998753211
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLH 878 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 878 (929)
........||+.|||||++.+..++.++||||+|+++|++..+..++..... .++. .............
T Consensus 150 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~--~~~~----~~i~~~~~~~~~~-- 218 (320)
T cd05590 150 ---GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE--DDLF----EAILNDEVVYPTW-- 218 (320)
T ss_pred ---CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--HHHH----HHHhcCCCCCCCC--
Confidence 1122345799999999999999999999999999888776555444432221 1111 1111111110111
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCH
Q 002376 879 DCLITIIGSVGLSCTTESPGGRIGI 903 (929)
Q Consensus 879 ~~~~~~~~~l~~~Cl~~dP~~RPs~ 903 (929)
+..-+.+++.+|++.||++||++
T Consensus 219 --~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 219 --LSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred --CCHHHHHHHHHHcccCHHHCCCC
Confidence 12222347779999999999998
No 144
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.96 E-value=4e-30 Score=284.32 Aligned_cols=218 Identities=25% Similarity=0.271 Sum_probs=158.5
Q ss_pred eeecccCceeEEeccccC-------------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcceEEEEE
Q 002376 667 NLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
++||+|+||+||+|+... ..+.+..|.+++..+ +||||+++++++... ...|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~-----~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTK-----DRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC-----CeEEEEE
Confidence 369999999999987641 123466788888866 799999999998543 3489999
Q ss_pred EecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 727 EFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 76 E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~--- 149 (321)
T cd05591 76 EYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN--- 149 (321)
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccC---
Confidence 9999999998876433 2367899999999998 9999999999999999999999999998753211
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLH 878 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 878 (929)
........||+.|||||++.+..++.++||||+|++++++..+..++..... .+.. ...............
T Consensus 150 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~--~~~~----~~i~~~~~~~p~~~~ 220 (321)
T cd05591 150 ---GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE--DDLF----ESILHDDVLYPVWLS 220 (321)
T ss_pred ---CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH--HHHH----HHHHcCCCCCCCCCC
Confidence 1112345799999999999999999999999999988887665544432221 1111 111111111111111
Q ss_pred HHHHHHHHHHhccccCCCCCCCC-------CHHHHHH
Q 002376 879 DCLITIIGSVGLSCTTESPGGRI-------GIREALR 908 (929)
Q Consensus 879 ~~~~~~~~~l~~~Cl~~dP~~RP-------s~~ev~~ 908 (929)
. -+.+++.+|++.||++|| ++.++++
T Consensus 221 ~----~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 221 K----EAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred H----HHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 2 222377799999999999 7777763
No 145
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.96 E-value=4.5e-30 Score=284.73 Aligned_cols=224 Identities=25% Similarity=0.284 Sum_probs=159.3
Q ss_pred eeecccCceeEEeccccC-------------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcceEEEEE
Q 002376 667 NLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
++||+|+||+||+++... ..+.+.+|..++.++ +||||+++++++... ...|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~-----~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTE-----SRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcC-----CEEEEEE
Confidence 469999999999887641 123467899999888 799999999998543 3589999
Q ss_pred EecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 727 EFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 76 e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~---- 148 (329)
T cd05588 76 EFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR---- 148 (329)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCcccccccc----
Confidence 9999999988875332 3367899999999998 999999999999999999999999999874211
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-h-hhhccChHHHHhhcccchhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-N-VLQVLDPELRQLMTSNESQTIQ 876 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~-~~~~~~~~l~~~~~~~~~~~~~ 876 (929)
........+||+.|||||++.+..++.++||||+|+++|++..+..++..... . ..+.....+........ ..
T Consensus 149 --~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 223 (329)
T cd05588 149 --PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ---IR 223 (329)
T ss_pred --CCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC---CC
Confidence 11122345799999999999999999999999999888887655554432111 0 00000011111111110 01
Q ss_pred hhHHHHHHHHHHhccccCCCCCCCCC------HHHHH
Q 002376 877 LHDCLITIIGSVGLSCTTESPGGRIG------IREAL 907 (929)
Q Consensus 877 ~~~~~~~~~~~l~~~Cl~~dP~~RPs------~~ev~ 907 (929)
.+..+..-+.+++.+|++.||++||+ ++|++
T Consensus 224 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~ 260 (329)
T cd05588 224 IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIK 260 (329)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHh
Confidence 11112222334777999999999997 56665
No 146
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.96 E-value=6.5e-30 Score=274.01 Aligned_cols=231 Identities=19% Similarity=0.269 Sum_probs=169.2
Q ss_pred CCCCCceeecccCceeEEeccccC--------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG--------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~--------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
++|+..++||+|+||.||+|.... ..+.+.+|+.++++++||||+++++++... ...++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~ 80 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE-----EPIYIIT 80 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCC-----CCcEEEE
Confidence 467888999999999999987531 245788999999999999999999988543 3379999
Q ss_pred EecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccccc
Q 002376 727 EFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 796 (929)
||+++|+|.++++... .++.+++.|++|||+. +++||||||+||++++++.+||+|||+++......
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05072 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE 157 (261)
T ss_pred ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCc
Confidence 9999999999886321 2356899999999997 99999999999999999999999999998653211
Q ss_pred CCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhh
Q 002376 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTI 875 (929)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 875 (929)
........++..|+|||++.+..++.++||||+|++++++.. ...++..... .+ ....+..... .....
T Consensus 158 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--~~-~~~~~~~~~~--~~~~~ 227 (261)
T cd05072 158 -----YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN--SD-VMSALQRGYR--MPRME 227 (261)
T ss_pred -----eeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH--HH-HHHHHHcCCC--CCCCC
Confidence 011122346778999999998899999999999988777553 3322221111 00 0011111000 00000
Q ss_pred hhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 876 QLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 876 ~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
. .+..+.+++.+|++.+|++||+++++.+.|+++
T Consensus 228 ~----~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 228 N----CPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred C----CCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 1 112233377799999999999999999999863
No 147
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.96 E-value=4.2e-30 Score=283.30 Aligned_cols=215 Identities=23% Similarity=0.319 Sum_probs=154.4
Q ss_pred eeecccCceeEEeccccC-------------------cHHHHHHHHHHHHc-cCCccccceeeecccCCCCCcceEEEEE
Q 002376 667 NLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRN-VRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~-l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
++||+|+||+||+|+... ..+.+..|..++.. .+||||+++++++.. ....++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~-----~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQT-----KEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEc-----CCEEEEEE
Confidence 369999999999987642 12234556666665 489999999998853 34589999
Q ss_pred EecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 727 EFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 76 e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~--- 149 (316)
T cd05592 76 EYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG--- 149 (316)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC---
Confidence 9999999998886432 2467899999999998 9999999999999999999999999999754211
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLH 878 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 878 (929)
.......+||+.|||||++.+..++.++||||+|++++++..+..++..... .++... +.. .... .+
T Consensus 150 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~--~~~~~~-i~~---~~~~----~~ 216 (316)
T cd05592 150 ---EGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE--DELFDS-ILN---DRPH----FP 216 (316)
T ss_pred ---CCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH--HHHHHH-HHc---CCCC----CC
Confidence 1122345799999999999999999999999999888776555444332211 111110 110 0000 01
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCHHH
Q 002376 879 DCLITIIGSVGLSCTTESPGGRIGIRE 905 (929)
Q Consensus 879 ~~~~~~~~~l~~~Cl~~dP~~RPs~~e 905 (929)
..+..-+.+++.+||+.||++||++.+
T Consensus 217 ~~~~~~~~~ll~~~l~~~P~~R~~~~~ 243 (316)
T cd05592 217 RWISKEAKDCLSKLFERDPTKRLGVDG 243 (316)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCChH
Confidence 111222334777999999999998763
No 148
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.96 E-value=3.1e-30 Score=279.11 Aligned_cols=231 Identities=21% Similarity=0.287 Sum_probs=168.2
Q ss_pred CCCCCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCC
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 718 (929)
++|...+.||+|+||.||+|.... ....|.+|+.+++.++||||+++++++...
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~---- 81 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG---- 81 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC----
Confidence 467888999999999999876431 124678999999999999999999998653
Q ss_pred cceEEEEEEecCCCCccccccccc------------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER------------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMT 780 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~ 780 (929)
...++||||+++|+|.+++.... .++.|++.|++|||+. +|+||||||+||++++++.
T Consensus 82 -~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~ 157 (277)
T cd05032 82 -QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLT 157 (277)
T ss_pred -CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCC
Confidence 34799999999999999885321 2356899999999987 9999999999999999999
Q ss_pred eEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhcc
Q 002376 781 AKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVL 859 (929)
Q Consensus 781 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~ 859 (929)
+||+|||+++.+..... ........++..|+|||.+.+..++.++||||+|++++++.. ...++..... .+
T Consensus 158 ~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~-- 229 (277)
T cd05032 158 VKIGDFGMTRDIYETDY----YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN--EE-- 229 (277)
T ss_pred EEECCcccchhhccCcc----cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH--HH--
Confidence 99999999986532211 011122356789999999988889999999999998887653 3322221111 11
Q ss_pred ChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 860 DPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 860 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
........... ..+......+.+++.+||+.+|++|||+.|+++.|++
T Consensus 230 ---~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 230 ---VLKFVIDGGHL--DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred ---HHHHHhcCCCC--CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 11111100000 0001112223348889999999999999999998864
No 149
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.96 E-value=1.6e-30 Score=281.62 Aligned_cols=235 Identities=22% Similarity=0.282 Sum_probs=170.2
Q ss_pred CCCCCceeecccCceeEEecccc---------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
++|+..++||+|+||.||+|++. ...+.+.+|+.+++.++||||+++++++...
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----- 81 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS----- 81 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-----
Confidence 46788899999999999998642 1134677899999999999999999998542
Q ss_pred ceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
..+++|||+++|+|.++++... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 82 -~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~ 157 (279)
T cd05109 82 -TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (279)
T ss_pred -CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCcee
Confidence 2589999999999999986432 2367999999999998 99999999999999999999999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTS 869 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~ 869 (929)
.+...... .......+++.|||||...+..++.++||||+|++++++.. ...++...+. ..+......
T Consensus 158 ~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-------~~~~~~~~~ 226 (279)
T cd05109 158 LLDIDETE----YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA-------REIPDLLEK 226 (279)
T ss_pred ecccccce----eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-------HHHHHHHHC
Confidence 76321110 01112235678999999998899999999999988777533 2222221111 111111111
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
..... ....+...+. +++.+||+.||++||++.|+++.|+++.+..
T Consensus 227 ~~~~~-~~~~~~~~~~-~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 227 GERLP-QPPICTIDVY-MIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred CCcCC-CCccCCHHHH-HHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 10000 0011122233 3788999999999999999999998876554
No 150
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-30 Score=285.47 Aligned_cols=225 Identities=25% Similarity=0.294 Sum_probs=172.7
Q ss_pred CCceeecccCceeEEecccc--------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 664 SHENLIGSGSFGSVLHNERT--------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 664 ~~~~~iG~G~~g~Vy~~~~~--------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
...++||+|.||+|++|.|+ ....+|.+|+.+|.+++|||+|++||+..+. -..
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~q------p~m 186 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQ------PAM 186 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccc------hhh
Confidence 34578999999999999887 1356899999999999999999999998652 268
Q ss_pred EEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
||||.++.|+|.+.|++.. .++.|||.||+||.++ +.||||+.++|+|+-..-.+||+|||+.|.+.
T Consensus 187 MV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg 263 (1039)
T KOG0199|consen 187 MVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALG 263 (1039)
T ss_pred HHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccC
Confidence 9999999999999998632 2367999999999998 89999999999999998999999999999886
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCc-hhhhccChHHHHhhcccc
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPE-NVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~-~~~~~~~~~l~~~~~~~~ 871 (929)
...+.- .......-.+.|.|||.++.++++.++|||+||+.+|||.. ++.+|...+. .+-+.+|..-+ +
T Consensus 264 ~ned~Y---vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~er--L---- 334 (1039)
T KOG0199|consen 264 ENEDMY---VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGER--L---- 334 (1039)
T ss_pred CCCcce---EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcccccc--C----
Confidence 542221 11122234678999999999999999999999999988633 2333333322 23333442111 1
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRL 910 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L 910 (929)
.....|-..++. ++..||..+|++|||+.++.+.+
T Consensus 335 ---pRPk~csedIY~-imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 335 ---PRPKYCSEDIYQ-IMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred ---CCCCCChHHHHH-HHHHhccCCccccccHHHHHHhH
Confidence 111234455555 99999999999999999997543
No 151
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.96 E-value=3.6e-30 Score=285.12 Aligned_cols=222 Identities=25% Similarity=0.284 Sum_probs=158.2
Q ss_pred CCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHH---HccCCccccceeeecccCCCCCcc
Q 002376 663 FSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETL---RNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l---~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
|+..+.||+|+||.||++.... ..+.+.+|++++ +.++||||+++++++... .
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~-----~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTE-----D 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcC-----C
Confidence 5667899999999999987541 123455666554 567899999999998543 3
Q ss_pred eEEEEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
..|+||||+++|+|..+++... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 5899999999999988876422 3467899999999998 99999999999999999999999999987432
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
.. .......+||+.|||||++.+..++.++||||+|+++|++..+..++..... .+..+. +. ......
T Consensus 153 ~~------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~--~~~~~~-i~---~~~~~~ 220 (324)
T cd05589 153 GF------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE--EEVFDS-IV---NDEVRY 220 (324)
T ss_pred CC------CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH--HHHHHH-HH---hCCCCC
Confidence 11 1112345799999999999999999999999999888776554444322211 111111 11 111111
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCC-----HHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIG-----IREALR 908 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~ev~~ 908 (929)
... +...+.+++.+|++.||++||+ +.++++
T Consensus 221 p~~----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 221 PRF----LSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred CCC----CCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 111 1222233777999999999995 555543
No 152
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.96 E-value=7.5e-30 Score=284.71 Aligned_cols=237 Identities=21% Similarity=0.336 Sum_probs=168.0
Q ss_pred hCCCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHcc-CCccccceeeecccCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSLDS 716 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~ 716 (929)
.++|+..+.||+|+||+||+|.+. ...+.+.+|+.++.++ +||||++++++|...+
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~- 84 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG- 84 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC-
Confidence 357888999999999999998631 0124577899999999 6899999999885432
Q ss_pred CCcceEEEEEEecCCCCccccccccc------------------------------------------------------
Q 002376 717 KNMEFLALVYEFLSNGSLGDWIHGER------------------------------------------------------ 742 (929)
Q Consensus 717 ~~~~~~~lV~e~~~~gsL~~~l~~~~------------------------------------------------------ 742 (929)
...++||||+++|+|.++++..+
T Consensus 85 ---~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 85 ---GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred ---CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 24799999999999998875321
Q ss_pred ---------------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCC
Q 002376 743 ---------------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSS 801 (929)
Q Consensus 743 ---------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 801 (929)
.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~---- 234 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD---- 234 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcc----
Confidence 1245899999999998 999999999999999999999999999986532111
Q ss_pred ccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHHH
Q 002376 802 ISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCL 881 (929)
Q Consensus 802 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 881 (929)
........+++.|+|||++.+..++.++||||+|++++++.. .+..|..... .+............. ..+...
T Consensus 235 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~----~g~~p~~~~~-~~~~~~~~~~~~~~~--~~~~~~ 307 (343)
T cd05103 235 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVK-IDEEFCRRLKEGTRM--RAPDYT 307 (343)
T ss_pred hhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHH----CCCCCCCCcc-ccHHHHHHHhccCCC--CCCCCC
Confidence 011112345678999999999899999999999987776432 1222211000 011111111111000 000111
Q ss_pred -HHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHH
Q 002376 882 -ITIIGSVGLSCTTESPGGRIGIREALRRLKSSQE 915 (929)
Q Consensus 882 -~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~ 915 (929)
.++.+ ++.+||+.||++||++.|+++.|+.+.+
T Consensus 308 ~~~~~~-~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 308 TPEMYQ-TMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CHHHHH-HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 23334 8889999999999999999999998765
No 153
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.96 E-value=2.9e-30 Score=292.68 Aligned_cols=180 Identities=23% Similarity=0.279 Sum_probs=142.9
Q ss_pred CCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
.|+..++||+|+||.||+|+... ..+.+.+|+.++++++|||||++++++.+. ...
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~-----~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDK-----DNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeC-----CEE
Confidence 57888999999999999987641 123577899999999999999999998543 358
Q ss_pred EEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
|+|||||++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+....
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~ 153 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (382)
T ss_pred EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCccccc
Confidence 99999999999999886432 2356899999999998 999999999999999999999999999864311
Q ss_pred ccCC-----------------------------------------CCCccccceeccccccccccccCCCCCCCCCCCCC
Q 002376 795 RVDN-----------------------------------------QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPT 833 (929)
Q Consensus 795 ~~~~-----------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s 833 (929)
.... ..........+||+.|||||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS 233 (382)
T cd05625 154 THDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS 233 (382)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEe
Confidence 0000 00000112357999999999999999999999999
Q ss_pred CcCCCCCcchhHHhhh
Q 002376 834 SESFAGEFNIVKWVES 849 (929)
Q Consensus 834 ~g~~~~~~~~~~~~~~ 849 (929)
+||++|++.++..++.
T Consensus 234 lGvil~elltG~~Pf~ 249 (382)
T cd05625 234 VGVILYEMLVGQPPFL 249 (382)
T ss_pred chHHHHHHHhCCCCCC
Confidence 9998888766554443
No 154
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.96 E-value=6e-30 Score=283.16 Aligned_cols=214 Identities=27% Similarity=0.300 Sum_probs=154.7
Q ss_pred eeecccCceeEEeccccC-------------------cHHHHHHHHH-HHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 667 NLIGSGSFGSVLHNERTG-------------------SWKSFIAECE-TLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~-~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
+.||+|+||+||+|+... ..+.+.+|.. +++.++||||+++++++.. ....++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~-----~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-----ADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe-----CCEEEEEE
Confidence 469999999999987651 1123444544 4678999999999998854 33589999
Q ss_pred EecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 727 EFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
||+++|+|.+++.... .++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 76 e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~--- 149 (323)
T cd05575 76 DYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH--- 149 (323)
T ss_pred cCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccC---
Confidence 9999999998876432 2467999999999998 9999999999999999999999999998753211
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLH 878 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 878 (929)
........||+.|||||++.+..++.++||||+|++++++.....++.... ..+..+..... .........
T Consensus 150 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~--~~~~~~~i~~~----~~~~~~~~~ 220 (323)
T cd05575 150 ---SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD--TAEMYDNILNK----PLRLKPNIS 220 (323)
T ss_pred ---CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC--HHHHHHHHHcC----CCCCCCCCC
Confidence 112234579999999999999999999999999999888765544432221 11111111111 111111112
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCHH
Q 002376 879 DCLITIIGSVGLSCTTESPGGRIGIR 904 (929)
Q Consensus 879 ~~~~~~~~~l~~~Cl~~dP~~RPs~~ 904 (929)
. .+.+++.+|++.||++||+++
T Consensus 221 ~----~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 221 V----SARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred H----HHHHHHHHHhhcCHHhCCCCC
Confidence 2 233367799999999999985
No 155
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=1.8e-30 Score=285.35 Aligned_cols=238 Identities=20% Similarity=0.314 Sum_probs=171.4
Q ss_pred hCCCCCceeecccCceeEEecccc------------------------CcHHHHHHHHHHHHcc-CCccccceeeecccC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT------------------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSL 714 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~------------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~ 714 (929)
.++|...+.||+|+||.||+++.. ...+++.+|+.+++++ +||||++++++|...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 357888999999999999987531 1123577899999999 799999999998543
Q ss_pred CCCCcceEEEEEEecCCCCccccccccc------------------------cccccHHHHHHHhhhCCCCCEEecCCCC
Q 002376 715 DSKNMEFLALVYEFLSNGSLGDWIHGER------------------------KNELDITSALDYLHNDCEVPVVHSDLKP 770 (929)
Q Consensus 715 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~------------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~ 770 (929)
+ ..|+||||+++|+|.+++...+ .++.|++.||+|||+. +++||||||
T Consensus 97 ~-----~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 168 (307)
T cd05098 97 G-----PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAA 168 (307)
T ss_pred C-----ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccH
Confidence 3 4899999999999999986432 1256899999999987 999999999
Q ss_pred CCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhh
Q 002376 771 GNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVES 849 (929)
Q Consensus 771 ~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~ 849 (929)
+||++++++.+||+|||.++....... ........+++.|||||++.+..++.++||||+|++++++.. ...++.
T Consensus 169 ~Nill~~~~~~kL~dfg~a~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~ 244 (307)
T cd05098 169 RNVLVTEDNVMKIADFGLARDIHHIDY----YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 244 (307)
T ss_pred HheEEcCCCcEEECCCcccccccccch----hhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 999999999999999999876532110 011112234578999999999899999999999987777543 222221
Q ss_pred cCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 850 NLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 850 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
..+ ..+ +........ ....+......+.+++.+||+.+|++||+|.||++.|+++.+...
T Consensus 245 ~~~--~~~-----~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~ 304 (307)
T cd05098 245 GVP--VEE-----LFKLLKEGH--RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTS 304 (307)
T ss_pred cCC--HHH-----HHHHHHcCC--CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhh
Confidence 111 111 111111111 001111122233348889999999999999999999999887643
No 156
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.96 E-value=2e-30 Score=279.78 Aligned_cols=235 Identities=22% Similarity=0.278 Sum_probs=170.6
Q ss_pred HHhhCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCC-c
Q 002376 657 RRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKN-M 719 (929)
Q Consensus 657 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~-~ 719 (929)
+.+++.|+..+.||+|+||.||+|.... ....+.+|+.+++++ +||||+++++++...+... .
T Consensus 2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 2 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred CChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 3467788889999999999999987641 245788999999998 7999999999987643322 3
Q ss_pred ceEEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
...|+||||+++|+|.+++...+ .++.|++.|++|||+. +|+|||+||+||++++++.+||+|||++
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~ 158 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVS 158 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCc
Confidence 46899999999999999887422 1356899999999998 9999999999999999999999999999
Q ss_pred cccccccCCCCCccccceeccccccccccccC-----CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHH
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGL-----GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELR 864 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 864 (929)
+...... .......|++.|+|||++. +..++.++||||+|++++++.....++......... ..
T Consensus 159 ~~~~~~~------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~-----~~ 227 (272)
T cd06637 159 AQLDRTV------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL-----FL 227 (272)
T ss_pred eeccccc------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHH-----HH
Confidence 8653211 1123457899999999986 345889999999998888766555444322210000 00
Q ss_pred HhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 865 QLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
............. .+..+.+++.+||+.+|++|||++|+++
T Consensus 228 --~~~~~~~~~~~~~-~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 228 --IPRNPAPRLKSKK-WSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred --HhcCCCCCCCCCC-cCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 0000000000001 1122334778999999999999999875
No 157
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.96 E-value=3.1e-30 Score=275.68 Aligned_cols=229 Identities=24% Similarity=0.314 Sum_probs=167.4
Q ss_pred CCCCCceeecccCceeEEecccc------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEe
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF 728 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~ 728 (929)
++|+..+.||+|+||.||++... ...+.|.+|+.++++++|||++++++++...+ ...++||||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~~lv~e~ 81 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK----GGLYIVTEY 81 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCC----CceEEEEEC
Confidence 36778899999999999988654 23457889999999999999999999875432 347999999
Q ss_pred cCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 729 LSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 729 ~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
+++|+|.++++... .++.+++.||+|||+. +|+||||||+||++++++.+|++|||+++.....
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~--- 155 (256)
T cd05082 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 155 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceecccc---
Confidence 99999999886432 2356899999999998 9999999999999999999999999998754211
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLH 878 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 878 (929)
.....++..|+|||++.+..++.++||||+|++++++.. .+..|..... ...+.......... ...
T Consensus 156 ------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~----~g~~p~~~~~--~~~~~~~~~~~~~~--~~~ 221 (256)
T cd05082 156 ------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS----FGRVPYPRIP--LKDVVPRVEKGYKM--DAP 221 (256)
T ss_pred ------CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHh----CCCCCCCCCC--HHHHHHHHhcCCCC--CCC
Confidence 112244678999999998899999999999987776532 1222211000 00111111111000 011
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 879 DCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 879 ~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
+.....+.+++.+|++.+|++|||+++++++|+++
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 222 DGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 11222334478899999999999999999999864
No 158
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.96 E-value=5.3e-30 Score=283.88 Aligned_cols=219 Identities=26% Similarity=0.306 Sum_probs=156.5
Q ss_pred eeecccCceeEEeccccCc-------------------HHHHHHHHH-HHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 667 NLIGSGSFGSVLHNERTGS-------------------WKSFIAECE-TLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~~-------------------~~~~~~E~~-~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
+.||+|+||+||++++... .+.+.+|.. +++.++||||+++++++... ...|+||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~-----~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA-----DKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcC-----CeEEEEE
Confidence 3699999999999876511 123334443 46778999999999988543 3489999
Q ss_pred EecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 727 EFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~--- 149 (325)
T cd05602 76 DYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--- 149 (325)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccC---
Confidence 9999999998886432 2467999999999998 9999999999999999999999999999753211
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLH 878 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 878 (929)
.......+||+.|||||++.+..++.++||||+|++++++.....++..... .+..+..... .........
T Consensus 150 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~----~~~~~~~~~ 220 (325)
T cd05602 150 ---NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--AEMYDNILNK----PLQLKPNIT 220 (325)
T ss_pred ---CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH--HHHHHHHHhC----CcCCCCCCC
Confidence 1122345799999999999999999999999999988887655444332211 1111111111 111111122
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 879 DCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 879 ~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
.. +++++.+|++.||.+||++.+.+..
T Consensus 221 ~~----~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 221 NS----ARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred HH----HHHHHHHHcccCHHHCCCCCCCHHH
Confidence 22 3336669999999999998754433
No 159
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.96 E-value=2.1e-30 Score=279.34 Aligned_cols=224 Identities=24% Similarity=0.299 Sum_probs=160.8
Q ss_pred eeecccCceeEEeccccC-------------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcceEEEEE
Q 002376 667 NLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
+.||+|+||.||+|...+ ..+.+.+|+++++++ +||||+++++++... ...++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-----~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR-----GYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC-----CCceEEE
Confidence 368999999999986431 124677899999999 899999999998543 3479999
Q ss_pred EecCCCCccccccccc------------------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceE
Q 002376 727 EFLSNGSLGDWIHGER------------------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAK 782 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~------------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 782 (929)
||+++|+|.++++..+ .++.|++.|++|||+. +++||||||+||++++++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEE
Confidence 9999999999886422 2356899999999997 999999999999999999999
Q ss_pred EeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccCh
Q 002376 783 VGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDP 861 (929)
Q Consensus 783 i~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~ 861 (929)
++|||+++..... ........+..|+|||++.+..++.++||||+|++++++.. ...++..... .
T Consensus 153 l~dfgl~~~~~~~-------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-------~ 218 (270)
T cd05047 153 IADFGLSRGQEVY-------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-------A 218 (270)
T ss_pred ECCCCCccccchh-------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH-------H
Confidence 9999998632110 00111234667999999988899999999999988777542 2222211111 1
Q ss_pred HHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhH
Q 002376 862 ELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQ 914 (929)
Q Consensus 862 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~ 914 (929)
........... .+........+.+++.+||+.+|.+||++.|++++|+++.
T Consensus 219 ~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 219 ELYEKLPQGYR--LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred HHHHHHhCCCC--CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 11111111000 0000011122334888999999999999999999999874
No 160
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.96 E-value=1.2e-29 Score=272.26 Aligned_cols=230 Identities=21% Similarity=0.311 Sum_probs=168.1
Q ss_pred CCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
+|+..+.||+|+||.||+|.... ..+++.+|++++++++||||+++++++...+ ..++||
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~ 81 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-----PFYIIT 81 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCC-----CcEEEE
Confidence 46777899999999999987541 2457889999999999999999999986433 379999
Q ss_pred EecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccccc
Q 002376 727 EFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 796 (929)
||+++|+|.+++.... .++.|++.||+|||+. +++||||||+||++++++.+||+|||+++......
T Consensus 82 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 82 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred EeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence 9999999999886322 2357899999999998 99999999999999999999999999998653211
Q ss_pred CCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhh
Q 002376 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTI 875 (929)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 875 (929)
. .......++..|+|||++.+..++.++||||+|++++++.. ...++... ...+..+ .+..... .
T Consensus 159 ~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~--~~~~~~~-~~~~~~~------~ 224 (263)
T cd05052 159 Y-----TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYE-LLEKGYR------M 224 (263)
T ss_pred e-----eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--CHHHHHH-HHHCCCC------C
Confidence 1 11111234678999999999999999999999988777543 22222111 1111110 1111000 0
Q ss_pred hhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 876 QLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 876 ~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
..++..+..+.+++.+||+.||++||+|.|++++|+++
T Consensus 225 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 225 ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 11111222333477899999999999999999999875
No 161
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.96 E-value=1e-30 Score=300.29 Aligned_cols=179 Identities=26% Similarity=0.345 Sum_probs=137.8
Q ss_pred hhCCCCCceeecccCceeEEeccccC------------cHHHHHHHHHHHHccCCccccceeeecccCCC---CCcceEE
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS---KNMEFLA 723 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~---~~~~~~~ 723 (929)
..++|+..+.||+|+||.||+|.... ......+|+.+++.++|||||++++++..... ....+++
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~ 143 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLN 143 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEE
Confidence 34679999999999999999987642 12345679999999999999999988754321 1223578
Q ss_pred EEEEecCCCCccccccc------------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC-ceEEecccccc
Q 002376 724 LVYEFLSNGSLGDWIHG------------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM-TAKVGDFGLAR 790 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~------------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~-~~ki~DfGla~ 790 (929)
+||||+++ ++.+++.. .+.++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+|+
T Consensus 144 lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 144 VVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred EEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccccch
Confidence 99999974 67666531 122356999999999998 999999999999999665 79999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
.+... .......||+.|||||++.+. .++.++||||+|++++++.++..++
T Consensus 220 ~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf 271 (440)
T PTZ00036 220 NLLAG-------QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIF 271 (440)
T ss_pred hccCC-------CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 65321 112234789999999998764 6899999999999888876554433
No 162
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.96 E-value=4.7e-30 Score=298.16 Aligned_cols=239 Identities=22% Similarity=0.271 Sum_probs=173.4
Q ss_pred HHHHHhhCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCC
Q 002376 654 DELRRATGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLD 715 (929)
Q Consensus 654 ~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~ 715 (929)
.+.+...++|...+.||+|+||+||+++... ....+.+|+..+..++|+|++++++.+...+
T Consensus 25 ~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~ 104 (496)
T PTZ00283 25 ATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKD 104 (496)
T ss_pred ccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccc
Confidence 3445566899999999999999999987531 1346778999999999999999988775433
Q ss_pred CC---CcceEEEEEEecCCCCccccccccc------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCc
Q 002376 716 SK---NMEFLALVYEFLSNGSLGDWIHGER------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMT 780 (929)
Q Consensus 716 ~~---~~~~~~lV~e~~~~gsL~~~l~~~~------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~ 780 (929)
.. ....+++||||+++|+|.++++... .++.|++.||+|+|+. +|+||||||+|||+++++.
T Consensus 105 ~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~ 181 (496)
T PTZ00283 105 PRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGL 181 (496)
T ss_pred ccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCC
Confidence 21 1224689999999999999886321 2357899999999998 9999999999999999999
Q ss_pred eEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccC
Q 002376 781 AKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLD 860 (929)
Q Consensus 781 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (929)
+||+|||+++.+..... .......+||+.|||||++.+..++.++||||+|+++|++.....++... ...++++
T Consensus 182 vkL~DFGls~~~~~~~~----~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~--~~~~~~~ 255 (496)
T PTZ00283 182 VKLGDFGFSKMYAATVS----DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE--NMEEVMH 255 (496)
T ss_pred EEEEecccCeecccccc----ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC--CHHHHHH
Confidence 99999999986532211 11123457999999999999999999999999998877765444333211 1122222
Q ss_pred hHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 861 PELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 861 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
......... .. .....-+.+++.+||+.||++||++.++++
T Consensus 256 ~~~~~~~~~---~~----~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 256 KTLAGRYDP---LP----PSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred HHhcCCCCC---CC----CCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 211111100 01 111222334777999999999999999875
No 163
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.96 E-value=7.5e-30 Score=282.65 Aligned_cols=219 Identities=29% Similarity=0.290 Sum_probs=156.6
Q ss_pred eeecccCceeEEeccccC-------------------cHHHHHHHHH-HHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 667 NLIGSGSFGSVLHNERTG-------------------SWKSFIAECE-TLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~-~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
+.||+|+||+||+++... ..+.+.+|.. +++.++||||+++++++... ...|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~-----~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTT-----EKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecC-----CEEEEEE
Confidence 469999999999987541 1233445554 46779999999999988543 3589999
Q ss_pred EecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 727 EFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
||+++|+|.+++.... .++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--- 149 (325)
T cd05604 76 DFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--- 149 (325)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCC---
Confidence 9999999988876432 3467899999999998 9999999999999999999999999998753211
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLH 878 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 878 (929)
.......+||+.|||||++.+..++.++||||+|++++++..+..++.... ..+..+..... .....+...
T Consensus 150 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~--~~~~~~~~~~~----~~~~~~~~~ 220 (325)
T cd05604 150 ---SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD--VAEMYDNILHK----PLVLRPGAS 220 (325)
T ss_pred ---CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC--HHHHHHHHHcC----CccCCCCCC
Confidence 112234579999999999999999999999999999998765544432211 11111111111 111111111
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 879 DCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 879 ~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
... .+++.+|++.+|++||++++.++.
T Consensus 221 ~~~----~~ll~~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 221 LTA----WSILEELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred HHH----HHHHHHHhccCHHhcCCCCCCHHH
Confidence 222 236679999999999988654433
No 164
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96 E-value=4.5e-30 Score=288.62 Aligned_cols=178 Identities=26% Similarity=0.296 Sum_probs=141.7
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCC-CCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS-KNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-~~~~ 720 (929)
.++|+..+.||+|+||.||++.... ..+.+.+|+.+++.++||||+++++++..... ....
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 4689999999999999999986541 23467789999999999999999999864332 1223
Q ss_pred eEEEEEEecCCCCccccccc------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHG------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
..|+||||+++ ++.+.++. ...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 100 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 175 (359)
T cd07876 100 DVYLVMELMDA-NLCQVIHMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTACT 175 (359)
T ss_pred eeEEEEeCCCc-CHHHHHhccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCCcccccc
Confidence 47999999965 56555432 123467999999999998 999999999999999999999999999975421
Q ss_pred ccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
. .......||+.|+|||++.+..++.++||||+|+++|++.....++
T Consensus 176 ~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf 222 (359)
T cd07876 176 N-------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIF 222 (359)
T ss_pred C-------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCC
Confidence 1 1123347899999999999999999999999999888876555444
No 165
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.96 E-value=2.3e-30 Score=275.92 Aligned_cols=225 Identities=22% Similarity=0.295 Sum_probs=160.3
Q ss_pred eeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEec
Q 002376 667 NLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFL 729 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~ 729 (929)
+.||+|+||.||+|.... ....|.+|++++++++||||++++++|.... ..++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ-----PIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC-----CeEEEEeec
Confidence 368999999999986531 1346889999999999999999999986533 479999999
Q ss_pred CCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCC
Q 002376 730 SNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQS 800 (929)
Q Consensus 730 ~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 800 (929)
++++|.++++... ....|++.||+|||+. +|+||||||+||++++++.+|++|||+++.......
T Consensus 76 ~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--- 149 (252)
T cd05084 76 QGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY--- 149 (252)
T ss_pred cCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccc---
Confidence 9999999986322 2356899999999998 899999999999999999999999999875432110
Q ss_pred CccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhhhhhH
Q 002376 801 SISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHD 879 (929)
Q Consensus 801 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 879 (929)
........++..|+|||++.++.++.++||||+|++++++.. ...++..... ............ ...++
T Consensus 150 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~-------~~~~~~~~~~~~--~~~~~ 219 (252)
T cd05084 150 -ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN-------QQTREAIEQGVR--LPCPE 219 (252)
T ss_pred -cccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH-------HHHHHHHHcCCC--CCCcc
Confidence 000011123567999999999999999999999988777543 2222211111 011111100000 00111
Q ss_pred HHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 880 CLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 880 ~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
..+..+.+++.+|++.+|++||++.|+.++|++
T Consensus 220 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 220 LCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 112223348889999999999999999999863
No 166
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.96 E-value=9.2e-30 Score=274.59 Aligned_cols=234 Identities=20% Similarity=0.277 Sum_probs=166.0
Q ss_pred CCceeecccCceeEEeccccC--------------------cHHHHHHHHHHHHccCCccccceeeecccCCC-CCcceE
Q 002376 664 SHENLIGSGSFGSVLHNERTG--------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS-KNMEFL 722 (929)
Q Consensus 664 ~~~~~iG~G~~g~Vy~~~~~~--------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-~~~~~~ 722 (929)
...+.||+|+||.||+|+... ..+.|.+|+++++.++||||++++++|..... ......
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456889999999999986431 13468889999999999999999998865332 122347
Q ss_pred EEEEEecCCCCcccccccc--------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccc
Q 002376 723 ALVYEFLSNGSLGDWIHGE--------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~--------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGl 788 (929)
++||||+++|+|.+++... ..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCc
Confidence 8999999999998876311 12356899999999997 999999999999999999999999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhh
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLM 867 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~ 867 (929)
++.+..... ........+++.|+|||+..+..++.++||||+|++++++.. ...++.... +..+....
T Consensus 159 ~~~~~~~~~----~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-------~~~~~~~~ 227 (272)
T cd05075 159 SKKIYNGDY----YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVE-------NSEIYDYL 227 (272)
T ss_pred ccccCcccc----eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCC-------HHHHHHHH
Confidence 986532111 011122346778999999999999999999999988777543 222221111 11111111
Q ss_pred cccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 868 TSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
...... .........+++++.+||+.||++|||+.|+++.|+++
T Consensus 228 ~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 228 RQGNRL--KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HcCCCC--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111100 00011122234488899999999999999999999874
No 167
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.96 E-value=2e-30 Score=280.56 Aligned_cols=233 Identities=21% Similarity=0.267 Sum_probs=166.5
Q ss_pred hhCCCCCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHccCCccccceeeecccCCC
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS 716 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~ 716 (929)
++++|+..+.||+|+||.||+|.... ....|.+|+.++++++||||+++++++.+.+
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 82 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL- 82 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-
Confidence 34678889999999999999886642 1246889999999999999999999886543
Q ss_pred CCcceEEEEEEecCCCCccccccccc---------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC--
Q 002376 717 KNMEFLALVYEFLSNGSLGDWIHGER---------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM-- 779 (929)
Q Consensus 717 ~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~-- 779 (929)
..++||||+++|+|.++++..+ .++.||+.|++|||+. +++||||||+||++++++
T Consensus 83 ----~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~ 155 (277)
T cd05036 83 ----PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPG 155 (277)
T ss_pred ----CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCC
Confidence 3699999999999999886432 2356899999999998 899999999999998755
Q ss_pred -ceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhh
Q 002376 780 -TAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQ 857 (929)
Q Consensus 780 -~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~ 857 (929)
.+|++|||+++.+..... ........++..|||||++.+..++.++||||+|++++++.. ...++.... ..+
T Consensus 156 ~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~--~~~ 229 (277)
T cd05036 156 RVAKIADFGMARDIYRASY----YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT--NQE 229 (277)
T ss_pred cceEeccCccccccCCccc----eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC--HHH
Confidence 699999999986532110 000111234568999999999999999999999988777542 322222111 111
Q ss_pred ccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 858 VLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 858 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
..+. +... ....... .+...+. +++.+|++.+|++||++.||++.|++
T Consensus 230 ~~~~-~~~~--~~~~~~~---~~~~~~~-~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 230 VMEF-VTGG--GRLDPPK---GCPGPVY-RIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred HHHH-HHcC--CcCCCCC---CCCHHHH-HHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 1111 1000 0000011 1112233 37889999999999999999998863
No 168
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.96 E-value=2.4e-30 Score=278.58 Aligned_cols=233 Identities=21% Similarity=0.312 Sum_probs=168.2
Q ss_pred CCCCCceeecccCceeEEeccccC--------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG--------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~--------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
++|+..+.||+|+||.||+|+... ..+.+.+|++++++++|||++++.+++...+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 79 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK----- 79 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC-----
Confidence 467788999999999999886531 1346889999999999999999999985433
Q ss_pred eEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..++||||+++|+|.++++... .++.+++.|++|||+. +++||||||+||++++++.+|++|||+++.
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~ 156 (268)
T cd05063 80 PAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRV 156 (268)
T ss_pred CcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCcccee
Confidence 4799999999999999886421 2357899999999998 999999999999999999999999999986
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
........ ........+..|+|||++.+..++.++||||+|++++++.+ ...++..... ..........
T Consensus 157 ~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~-------~~~~~~i~~~ 226 (268)
T cd05063 157 LEDDPEGT---YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-------HEVMKAINDG 226 (268)
T ss_pred cccccccc---eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-------HHHHHHHhcC
Confidence 53221110 11111233567999999998889999999999988777543 2322211111 1111111100
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
. ..+...++...+. +++.+||+.+|++||+|.+|++.|+++
T Consensus 227 ~-~~~~~~~~~~~~~-~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 227 F-RLPAPMDCPSAVY-QLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred C-CCCCCCCCCHHHH-HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 0000111222333 488899999999999999999999875
No 169
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.96 E-value=2.3e-30 Score=280.48 Aligned_cols=220 Identities=25% Similarity=0.293 Sum_probs=157.2
Q ss_pred ecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEec
Q 002376 669 IGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFL 729 (929)
Q Consensus 669 iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~ 729 (929)
||+|+||+||++.... ..+.+..|++++++++||||+++.+++... ...++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~-----~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTK-----TDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCC-----CeEEEEEeCC
Confidence 6999999999886541 123567899999999999999999988543 3489999999
Q ss_pred CCCCcccccccc------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 730 SNGSLGDWIHGE------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 730 ~~gsL~~~l~~~------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
++|+|.+++... ..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+....
T Consensus 76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~- 151 (280)
T cd05608 76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ- 151 (280)
T ss_pred CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCC-
Confidence 999998776321 12357899999999998 99999999999999999999999999997653211
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQL 877 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 877 (929)
.......||+.|+|||++.+..++.++||||+|+++|++.....++....... ............. ...
T Consensus 152 -----~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~---~~~ 220 (280)
T cd05608 152 -----SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV---ENKELKQRILNDS---VTY 220 (280)
T ss_pred -----ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch---hHHHHHHhhcccC---CCC
Confidence 11233578999999999999999999999999988777655444433221100 0011111110000 001
Q ss_pred hHHHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 002376 878 HDCLITIIGSVGLSCTTESPGGRI-----GIREALR 908 (929)
Q Consensus 878 ~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 908 (929)
+..++..+++++.+|++.||++|| +++|+++
T Consensus 221 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 221 PDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred cccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 111222333477799999999999 6677764
No 170
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.4e-30 Score=270.97 Aligned_cols=222 Identities=25% Similarity=0.272 Sum_probs=171.5
Q ss_pred hCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.+.|+..++||+|+||+||.++... ......+|..++.+++.|.||.+...|.+.+
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd----- 258 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKD----- 258 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCC-----
Confidence 3467888999999999999776542 2234557999999999999999988885544
Q ss_pred eEEEEEEecCCCCcccccccc----------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGE----------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~----------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
.+++|+..|.||+|.-+|... +.++.+|+.||++||+. +||.||+||+|||+|++|+++|+|.|+|.
T Consensus 259 ~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAv 335 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAV 335 (591)
T ss_pred ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEE
Confidence 499999999999999988733 24578999999999998 99999999999999999999999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhh-ccChHHHHhhcc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQ-VLDPELRQLMTS 869 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~ 869 (929)
.+.+.. .....+||.||||||++.++.|+...|=|++||.+|+|.-++-++....+.+.. -+|.++...
T Consensus 336 ei~~g~-------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~--- 405 (591)
T KOG0986|consen 336 EIPEGK-------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED--- 405 (591)
T ss_pred ecCCCC-------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc---
Confidence 775431 123348999999999999999999999999999888876666666665553322 344444321
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGI 903 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 903 (929)
. ...++..++-.+++...-++.||++|--.
T Consensus 406 ~----~ey~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 406 P----EEYSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred h----hhcccccCHHHHHHHHHHHccCHHHhccC
Confidence 1 11223344445556668999999999643
No 171
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.96 E-value=6.1e-30 Score=282.63 Aligned_cols=172 Identities=25% Similarity=0.342 Sum_probs=133.5
Q ss_pred ceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEec
Q 002376 666 ENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFL 729 (929)
Q Consensus 666 ~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~ 729 (929)
.++||+|+||+||+|+... ....+.+|++++++++||||+++++++... .....++||||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv~e~~ 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSH---ADRKVWLLFDYA 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecC---CCcEEEEEEecc
Confidence 4689999999999987431 134678999999999999999999988643 234589999999
Q ss_pred CCCCcccccccc-----------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeee----cCCCceEEecccc
Q 002376 730 SNGSLGDWIHGE-----------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILL----DEEMTAKVGDFGL 788 (929)
Q Consensus 730 ~~gsL~~~l~~~-----------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl----~~~~~~ki~DfGl 788 (929)
+ ++|.+++... +.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+
T Consensus 83 ~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 83 E-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred C-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 5 5777765411 23467999999999998 99999999999999 4667999999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHh
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWV 847 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~ 847 (929)
|+....... .........||+.|||||++.+. .++.++||||+|++++++....-+
T Consensus 159 a~~~~~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~ 215 (317)
T cd07868 159 ARLFNSPLK---PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPI 215 (317)
T ss_pred eeccCCCCc---cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence 986532211 11122345789999999998774 589999999999988876555433
No 172
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.96 E-value=7.1e-30 Score=282.59 Aligned_cols=218 Identities=23% Similarity=0.281 Sum_probs=158.6
Q ss_pred CCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcce
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
+|+..+.||+|+||+||+|+... ..+.+..|..++..+ +||+|+++++++.+. ..
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~-----~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTM-----DR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecC-----CE
Confidence 47788999999999999987652 123456788888777 589999999988543 35
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.|+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~ 152 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENM 152 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecC
Confidence 899999999999998875432 3467899999999998 99999999999999999999999999987532
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
.. .......+||+.|||||++.+..++.++||||+|++++++.++..++..... .+.... +. ......
T Consensus 153 ~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~--~~~~~~-i~---~~~~~~ 220 (323)
T cd05616 153 WD------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQS-IM---EHNVAY 220 (323)
T ss_pred CC------CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH--HHHHHH-HH---hCCCCC
Confidence 11 1122345799999999999999999999999999888886655444432221 111111 11 111111
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGI 903 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 903 (929)
... +..-+.+++.+|++.||++|+++
T Consensus 221 p~~----~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 221 PKS----MSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CCc----CCHHHHHHHHHHcccCHHhcCCC
Confidence 111 11222337779999999999985
No 173
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.96 E-value=6.5e-30 Score=283.05 Aligned_cols=218 Identities=25% Similarity=0.292 Sum_probs=158.7
Q ss_pred CCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCc-cccceeeecccCCCCCcce
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHR-NLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hp-niv~l~~~~~~~~~~~~~~ 721 (929)
+|+..+.||+|+||.||+|+... ..+.+..|+++++.++|+ +|+++++++.. ...
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-----~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-----MDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc-----CCE
Confidence 47788999999999999987652 134567899999999765 57788888743 335
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.|+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENI 152 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecC
Confidence 899999999999998886432 2367899999999998 99999999999999999999999999987431
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
. ........+||+.|+|||++.+..++.++||||+|++++++.++..++..... .+. ...........
T Consensus 153 ~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--~~~----~~~i~~~~~~~ 220 (324)
T cd05587 153 F------GGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE--DEL----FQSIMEHNVSY 220 (324)
T ss_pred C------CCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHH----HHHHHcCCCCC
Confidence 1 11122345799999999999999999999999999888887655444432221 010 11111111111
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGI 903 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 903 (929)
. ..+..-+.+++.+|++.||++||+.
T Consensus 221 ~----~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 221 P----KSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred C----CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 1 1112222337779999999999986
No 174
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.96 E-value=1.1e-29 Score=285.59 Aligned_cols=181 Identities=24% Similarity=0.268 Sum_probs=145.8
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||+|+||.||+++... ..+.+.+|+.++..++||+|+++++++.+ ...
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~-----~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQD-----KRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----CCE
Confidence 468889999999999999987641 12456789999999999999999998854 345
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.|+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~ 152 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLK 152 (360)
T ss_pred EEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCcccc
Confidence 899999999999999986433 2367899999999998 99999999999999999999999999987553
Q ss_pred cccCCC-----------------------------CCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchh
Q 002376 794 ERVDNQ-----------------------------SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIV 844 (929)
Q Consensus 794 ~~~~~~-----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~ 844 (929)
...... .........+||+.|||||++.+..++.++||||+|+++|++.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG 232 (360)
T cd05627 153 KAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232 (360)
T ss_pred cccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccC
Confidence 211000 000011235799999999999999999999999999999998776
Q ss_pred HHhhh
Q 002376 845 KWVES 849 (929)
Q Consensus 845 ~~~~~ 849 (929)
..++.
T Consensus 233 ~~Pf~ 237 (360)
T cd05627 233 YPPFC 237 (360)
T ss_pred CCCCC
Confidence 65553
No 175
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.96 E-value=2e-30 Score=277.09 Aligned_cols=227 Identities=26% Similarity=0.377 Sum_probs=164.7
Q ss_pred CCCCceeecccCceeEEeccccC--------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG--------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYE 727 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~--------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e 727 (929)
+|+..+.||+|+||.||++++.. ....|.+|++++++++||||+++++++... ...++|||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~lv~e 79 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQ-----RPIFIVTE 79 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCC-----CceEEEEe
Confidence 46677899999999999886541 235788999999999999999999998543 34799999
Q ss_pred ecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 728 FLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 728 ~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
|+++++|.++++... .++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~-- 154 (256)
T cd05059 80 YMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ-- 154 (256)
T ss_pred cCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceeccccc--
Confidence 999999999886322 2367899999999998 89999999999999999999999999998653210
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTIQL 877 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 877 (929)
........++..|+|||++.+..++.++||||+|++++++.. ...++..... .+.. ..+..... ...
T Consensus 155 ---~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~-~~~~~~~~------~~~ 222 (256)
T cd05059 155 ---YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN--SEVV-ESVSAGYR------LYR 222 (256)
T ss_pred ---ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH--HHHH-HHHHcCCc------CCC
Confidence 011111234568999999999999999999999988777543 2333322211 1100 11111000 000
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 002376 878 HDCLITIIGSVGLSCTTESPGGRIGIREALRRL 910 (929)
Q Consensus 878 ~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L 910 (929)
+...+..+.+++.+||+.+|++||||.|+++.|
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 223 PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 011122233488899999999999999999876
No 176
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.96 E-value=4.4e-30 Score=276.51 Aligned_cols=227 Identities=23% Similarity=0.277 Sum_probs=155.2
Q ss_pred eecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEe
Q 002376 668 LIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF 728 (929)
Q Consensus 668 ~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~ 728 (929)
.||+|+||+||+|+.. ...+.|.+|+.+++.++||||++++++|.... ..++||||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~-----~~~lv~e~ 76 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAI-----PYLLVFEY 76 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCC-----ccEEEEec
Confidence 5899999999987532 12357889999999999999999999986533 37999999
Q ss_pred cCCCCccccccccc------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccccc
Q 002376 729 LSNGSLGDWIHGER------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796 (929)
Q Consensus 729 ~~~gsL~~~l~~~~------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 796 (929)
+++|+|.+++++.. .++.||+.||+|||+. +++||||||+|||++.++.+||+|||+++.....
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~- 152 (268)
T cd05086 77 CELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKE- 152 (268)
T ss_pred CCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcc-
Confidence 99999999886421 2356899999999997 8999999999999999999999999998642111
Q ss_pred CCCCCccccceeccccccccccccCC-------CCCCCCCCCCCCcCCCCCcchh-HHhhhcCCchhhhccChHHHHhhc
Q 002376 797 DNQSSISSTHVFMGSIGYVPPEYGLG-------ERPSTAGDVPTSESFAGEFNIV-KWVESNLPENVLQVLDPELRQLMT 868 (929)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DV~s~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~ 868 (929)
..........|+..|+|||++.. ..++.++||||+|++++++... ..++....+ .+.+...+.+...
T Consensus 153 ---~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--~~~~~~~~~~~~~ 227 (268)
T cd05086 153 ---DYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD--REVLNHVIKDQQV 227 (268)
T ss_pred ---hhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHhhccc
Confidence 00111123467899999998753 2357899999999887775321 111111111 1111111111000
Q ss_pred ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 002376 869 SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLK 911 (929)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 911 (929)
. ..++.........+.+++..|| .+|++||+|+||++.|.
T Consensus 228 ~--~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 228 K--LFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred c--cCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 0 0001111111222333666999 67999999999998874
No 177
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=5.5e-30 Score=282.45 Aligned_cols=237 Identities=20% Similarity=0.327 Sum_probs=169.2
Q ss_pred CCCCCceeecccCceeEEecccc------------------------CcHHHHHHHHHHHHcc-CCccccceeeecccCC
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT------------------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSLD 715 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~------------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~ 715 (929)
++|...+.||+|+||.||+++.. .....+.+|+++++++ +||||++++++|...
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~- 90 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE- 90 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC-
Confidence 46778899999999999987531 1134678899999999 699999999998543
Q ss_pred CCCcceEEEEEEecCCCCccccccccc------------------------cccccHHHHHHHhhhCCCCCEEecCCCCC
Q 002376 716 SKNMEFLALVYEFLSNGSLGDWIHGER------------------------KNELDITSALDYLHNDCEVPVVHSDLKPG 771 (929)
Q Consensus 716 ~~~~~~~~lV~e~~~~gsL~~~l~~~~------------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~ 771 (929)
...++||||+++|+|.+++...+ .++.|++.||+|||+. +++||||||+
T Consensus 91 ----~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~ 163 (314)
T cd05099 91 ----GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAAR 163 (314)
T ss_pred ----CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeeccccce
Confidence 34799999999999999986422 1246899999999998 9999999999
Q ss_pred CeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhc
Q 002376 772 NILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESN 850 (929)
Q Consensus 772 NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~ 850 (929)
||++++++.+|++|||+++........ .......++..|||||++.+..++.++||||+|++++++.. ...++..
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~ 239 (314)
T cd05099 164 NVLVTEDNVMKIADFGLARGVHDIDYY----KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPG 239 (314)
T ss_pred eEEEcCCCcEEEccccccccccccccc----cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999865321110 01111234567999999999899999999999988777543 1111111
Q ss_pred CCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 851 LPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 851 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
.+ ..+ +............ ...+..++. +++.+||+.+|++||++.|+++.|+++.....
T Consensus 240 ~~--~~~-----~~~~~~~~~~~~~-~~~~~~~l~-~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~ 298 (314)
T cd05099 240 IP--VEE-----LFKLLREGHRMDK-PSNCTHELY-MLMRECWHAVPTQRPTFKQLVEALDKVLAAVS 298 (314)
T ss_pred CC--HHH-----HHHHHHcCCCCCC-CCCCCHHHH-HHHHHHcCCCcccCcCHHHHHHHHHHHHHHhc
Confidence 11 111 1111111100000 011112233 37889999999999999999999999876543
No 178
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.96 E-value=4.1e-30 Score=274.86 Aligned_cols=224 Identities=21% Similarity=0.257 Sum_probs=162.1
Q ss_pred eecccCceeEEecccc--------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEE
Q 002376 668 LIGSGSFGSVLHNERT--------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYE 727 (929)
Q Consensus 668 ~iG~G~~g~Vy~~~~~--------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e 727 (929)
.||+|+||.||+|.+. ...+++.+|+.+++.++||||+++++++.. ...++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA------ESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC------CCcEEEEe
Confidence 5899999999998532 113568899999999999999999998742 23689999
Q ss_pred ecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCC
Q 002376 728 FLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799 (929)
Q Consensus 728 ~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~ 799 (929)
|+++|+|.+++...+ .++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.+......
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~- 151 (257)
T cd05116 76 LAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY- 151 (257)
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCe-
Confidence 999999999886432 2367899999999998 9999999999999999999999999999865322110
Q ss_pred CCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhhhhh
Q 002376 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTIQLH 878 (929)
Q Consensus 800 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 878 (929)
........++..|+|||.+....++.++||||+|++++++.. ...++..... . .+......... .+.+
T Consensus 152 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~-----~~~~~i~~~~~--~~~~ 220 (257)
T cd05116 152 --YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG--N-----EVTQMIESGER--MECP 220 (257)
T ss_pred --eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--H-----HHHHHHHCCCC--CCCC
Confidence 011122245678999999988889999999999988877653 3333322211 1 11111111110 0111
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 879 DCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 879 ~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
...+.-+++++.+||+.||++||++++|+++|++
T Consensus 221 ~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 221 QRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 1122233347889999999999999999999976
No 179
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.96 E-value=1.9e-30 Score=281.67 Aligned_cols=230 Identities=18% Similarity=0.239 Sum_probs=165.0
Q ss_pred CCCCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
+|+..+.||+|+||+||+|.... ..+.|.+|+.+++.++||||+++++++.+.+
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~---- 81 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ---- 81 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC----
Confidence 35566889999999999986421 1246888999999999999999999986543
Q ss_pred ceEEEEEEecCCCCcccccccc------------------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeee
Q 002376 720 EFLALVYEFLSNGSLGDWIHGE------------------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILL 775 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~------------------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl 775 (929)
..++++||+++++|.+++... ..++.|++.||+|+|+. +|+||||||+||++
T Consensus 82 -~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~ 157 (283)
T cd05091 82 -PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLV 157 (283)
T ss_pred -ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEe
Confidence 379999999999999887411 12356899999999998 99999999999999
Q ss_pred cCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCch
Q 002376 776 DEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPEN 854 (929)
Q Consensus 776 ~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~ 854 (929)
++++.+||+|||+++....... ........+++.|+|||++.++.++.++||||+|++++++.. ...++.....
T Consensus 158 ~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~- 232 (283)
T cd05091 158 FDKLNVKISDLGLFREVYAADY----YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN- 232 (283)
T ss_pred cCCCceEecccccccccccchh----eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-
Confidence 9999999999999886532111 111122346789999999988899999999999988877543 2222211111
Q ss_pred hhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 855 VLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 855 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
.+ +.......... .........+.+++.+||+.+|++||+++||+++|+.
T Consensus 233 -~~-----~~~~i~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 233 -QD-----VIEMIRNRQVL--PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred -HH-----HHHHHHcCCcC--CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 11 11111110000 0001112223348889999999999999999999874
No 180
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.96 E-value=4.2e-30 Score=280.23 Aligned_cols=242 Identities=22% Similarity=0.217 Sum_probs=174.6
Q ss_pred CChHHHHHhhCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHcc-CCccccceeeecccC
Q 002376 651 ISYDELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNV-RHRNLVKLITSCSSL 714 (929)
Q Consensus 651 ~~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~ 714 (929)
++++++.+++++|+..+.||+|+||.||++.... ..+.+.+|+.+++++ +|||++++++++...
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 5567788889999999999999999999987641 235677899999999 899999999998765
Q ss_pred CCCCcceEEEEEEecCCCCcccccccc------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceE
Q 002376 715 DSKNMEFLALVYEFLSNGSLGDWIHGE------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAK 782 (929)
Q Consensus 715 ~~~~~~~~~lV~e~~~~gsL~~~l~~~------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 782 (929)
+.......++||||+++|+|.++++.. ..++.|++.||+|||+. +++||||||+||++++++.+|
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~k 168 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVK 168 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEE
Confidence 433345689999999999999877521 12357899999999998 999999999999999999999
Q ss_pred EeccccccccccccCCCCCccccceeccccccccccccCCCC-----CCCCCCCCCCcCCCCCcchhHHhhhcCCchhhh
Q 002376 783 VGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER-----PSTAGDVPTSESFAGEFNIVKWVESNLPENVLQ 857 (929)
Q Consensus 783 i~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~ 857 (929)
|+|||+++....... ......|+..|+|||++.... ++.++||||+|++++++.....++..... ..
T Consensus 169 l~dfg~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~-~~- 240 (291)
T cd06639 169 LVDFGVSAQLTSTRL------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP-VK- 240 (291)
T ss_pred Eeecccchhcccccc------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH-HH-
Confidence 999999886532110 112346889999999976543 68999999999887776544433322211 00
Q ss_pred ccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 858 VLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 858 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.+..... .........+.....+.+++.+||+.+|++||++.|+++
T Consensus 241 ----~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 241 ----TLFKIPR-NPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred ----HHHHHhc-CCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 0111000 000000001111223444888999999999999999875
No 181
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.96 E-value=5.3e-30 Score=273.96 Aligned_cols=224 Identities=21% Similarity=0.305 Sum_probs=159.8
Q ss_pred eecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEe
Q 002376 668 LIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF 728 (929)
Q Consensus 668 ~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~ 728 (929)
.||+|+||.||+|.+. ...+.|.+|+.++++++||||+++++++.. ...++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~------~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA------EALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC------CCeEEEEEe
Confidence 3899999999987542 113468899999999999999999998732 237999999
Q ss_pred cCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCC
Q 002376 729 LSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799 (929)
Q Consensus 729 ~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~ 799 (929)
+++|+|.+++...+ .++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++........
T Consensus 76 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~- 151 (257)
T cd05115 76 ASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY- 151 (257)
T ss_pred CCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccc-
Confidence 99999999886322 3367899999999998 9999999999999999999999999999865322110
Q ss_pred CCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhhhhh
Q 002376 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTIQLH 878 (929)
Q Consensus 800 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 878 (929)
........++..|+|||++.+..++.++||||+|++++++.. ...++.... +..+......... .+.+
T Consensus 152 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-------~~~~~~~~~~~~~--~~~~ 220 (257)
T cd05115 152 --YKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMK-------GPEVMSFIEQGKR--LDCP 220 (257)
T ss_pred --eeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCC-------HHHHHHHHHCCCC--CCCC
Confidence 011112234678999999988889999999999987776432 222221111 1111111111110 0000
Q ss_pred -HHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 879 -DCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 879 -~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
.+..++. +++.+||..+|++||++.+|.+.|+.+
T Consensus 221 ~~~~~~l~-~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 221 AECPPEMY-ALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCHHHH-HHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 1112233 377799999999999999999999864
No 182
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.96 E-value=3.2e-30 Score=277.69 Aligned_cols=227 Identities=23% Similarity=0.273 Sum_probs=155.1
Q ss_pred eecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEe
Q 002376 668 LIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF 728 (929)
Q Consensus 668 ~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~ 728 (929)
.||+|+||+||+|... ...+.|.+|+++++.++||||++++++|.... ..++||||
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~-----~~~lv~e~ 76 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESI-----PYLLVLEF 76 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCC-----ceEEEEEe
Confidence 5899999999988532 11346789999999999999999999986533 37999999
Q ss_pred cCCCCccccccccc-------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 729 LSNGSLGDWIHGER-------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 729 ~~~gsL~~~l~~~~-------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
+++|+|.++++..+ .++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 153 (269)
T cd05042 77 CPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPE 153 (269)
T ss_pred CCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccc
Confidence 99999999886422 2356899999999998 9999999999999999999999999998754221
Q ss_pred cCCCCCccccceeccccccccccccCC-------CCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLG-------ERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLM 867 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~ 867 (929)
.. ........+++.|+|||++.. ..++.++||||+|++++++.. ...++....+ .+..........
T Consensus 154 ~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--~~~~~~~~~~~~ 227 (269)
T cd05042 154 DY----YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD--EQVLKQVVREQD 227 (269)
T ss_pred hh----eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH--HHHHHHHhhccC
Confidence 00 011122346778999998743 357889999999988777543 2222211111 111111111000
Q ss_pred cccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 002376 868 TSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLK 911 (929)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 911 (929)
. .. ..+.........+.+++..|| .||++||+++||++.|.
T Consensus 228 ~-~~-~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 228 I-KL-PKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred c-cC-CCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 0 00 000011112222333666898 59999999999998873
No 183
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=4.6e-30 Score=285.59 Aligned_cols=236 Identities=20% Similarity=0.347 Sum_probs=169.5
Q ss_pred CCCCCceeecccCceeEEecccc------------------------CcHHHHHHHHHHHHcc-CCccccceeeecccCC
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT------------------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSLD 715 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~------------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~ 715 (929)
.+|...+.||+|+||.||++... ...+++.+|+++++++ +||||++++++|...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 36788899999999999987531 1134688999999999 7999999999986533
Q ss_pred CCCcceEEEEEEecCCCCccccccccc------------------------cccccHHHHHHHhhhCCCCCEEecCCCCC
Q 002376 716 SKNMEFLALVYEFLSNGSLGDWIHGER------------------------KNELDITSALDYLHNDCEVPVVHSDLKPG 771 (929)
Q Consensus 716 ~~~~~~~~lV~e~~~~gsL~~~l~~~~------------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~ 771 (929)
..++||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+
T Consensus 92 -----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~ 163 (334)
T cd05100 92 -----PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAAR 163 (334)
T ss_pred -----ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceeccccccc
Confidence 4799999999999999886421 1356899999999998 9999999999
Q ss_pred CeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhc
Q 002376 772 NILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESN 850 (929)
Q Consensus 772 NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~ 850 (929)
||++++++.+||+|||+++....... ........++..|||||++.+..++.++||||+|++++++.. ...++..
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 239 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDY----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG 239 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccc----cccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999986532110 011122234578999999999999999999999987777532 1111111
Q ss_pred CCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 851 LPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 851 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
.+ ..+ ............ ....+..++. +++.+||+.+|++||+|.|+++.|+++....
T Consensus 240 ~~--~~~-----~~~~~~~~~~~~-~~~~~~~~l~-~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 240 IP--VEE-----LFKLLKEGHRMD-KPANCTHELY-MIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred CC--HHH-----HHHHHHcCCCCC-CCCCCCHHHH-HHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 11 111 111110000000 0011122333 3888999999999999999999999987543
No 184
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.96 E-value=6e-30 Score=274.41 Aligned_cols=230 Identities=26% Similarity=0.361 Sum_probs=168.2
Q ss_pred CCCCCceeecccCceeEEeccccC--------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG--------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~--------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
++|+..++||+|+||.||+|++.. ..+.|.+|++++++++||||+++++++.. ...++||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~~~lv~ 79 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIYIVT 79 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECC------CCcEEEE
Confidence 568889999999999999986542 24578999999999999999999998632 2369999
Q ss_pred EecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccccc
Q 002376 727 EFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 796 (929)
||+++|+|.++++... ..+.+++.||+|+|+. +++||||||+||++++++.+||+|||.++.+....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 9999999999986421 2356899999999998 99999999999999999999999999998653221
Q ss_pred CCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhh
Q 002376 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTI 875 (929)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 875 (929)
. .......++..|+|||+..+..++.++||||+|++++++.+ ...++..... .+..+. ...... ....
T Consensus 157 ~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~--~~~~~~-~~~~~~--~~~~- 225 (262)
T cd05071 157 Y-----TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQ-VERGYR--MPCP- 225 (262)
T ss_pred c-----ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh--HHHHHH-HhcCCC--CCCc-
Confidence 1 11122346778999999988899999999999988777544 2222211111 111111 000000 0000
Q ss_pred hhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 876 QLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 876 ~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
.+ ..+.+.+++.+|++.||++||+++++++.|++.
T Consensus 226 --~~-~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 226 --PE-CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred --cc-cCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 11 122233488899999999999999999999874
No 185
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.96 E-value=5.3e-30 Score=277.20 Aligned_cols=219 Identities=24% Similarity=0.256 Sum_probs=157.8
Q ss_pred ecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEec
Q 002376 669 IGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFL 729 (929)
Q Consensus 669 iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~ 729 (929)
||+|+||.||+++... ..+.+..|++++++++||||+++++++.. ....++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~-----~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFES-----KTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEec-----CCeEEEEEecC
Confidence 6999999999886541 12245569999999999999999998854 33589999999
Q ss_pred CCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCC
Q 002376 730 SNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799 (929)
Q Consensus 730 ~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~ 799 (929)
++|+|.+++.... ..+.|++.|++|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 76 ~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~---- 148 (277)
T cd05607 76 NGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG---- 148 (277)
T ss_pred CCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCC----
Confidence 9999988775321 2356899999999998 9999999999999999999999999998765321
Q ss_pred CCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCch--hhhccChHHHHhhcccchhhhhh
Q 002376 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPEN--VLQVLDPELRQLMTSNESQTIQL 877 (929)
Q Consensus 800 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~ 877 (929)
.......|+..|+|||++.+..++.++||||+|+++|++.....++...... ..++....... .... .
T Consensus 149 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~--~- 218 (277)
T cd05607 149 ---KTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLED----EVKF--E- 218 (277)
T ss_pred ---ceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcc----cccc--c-
Confidence 1112346899999999999999999999999998887765554443322111 01111111100 0000 0
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 878 HDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 878 ~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
...+...+++++.+|++.||++||+++|+++.
T Consensus 219 ~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 219 HQNFTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred cccCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 01122223447789999999999999776543
No 186
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.96 E-value=1.4e-29 Score=280.06 Aligned_cols=214 Identities=28% Similarity=0.298 Sum_probs=153.3
Q ss_pred eeecccCceeEEeccccC-------------------cHHHHHHHHH-HHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 667 NLIGSGSFGSVLHNERTG-------------------SWKSFIAECE-TLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~-~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
++||+|+||.||+|+... ..+.+.+|.. +++.++||||+++++++.+ ....|+||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~-----~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQT-----AEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEc-----CCEEEEEE
Confidence 469999999999987641 1123445544 5788999999999998854 33589999
Q ss_pred EecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 727 EFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
||+++|+|.+++.... .++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--- 149 (321)
T cd05603 76 DYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP--- 149 (321)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCC---
Confidence 9999999988775332 2367999999999998 9999999999999999999999999998753111
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLH 878 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 878 (929)
........||+.|+|||++.+..++.++||||+|+++|++..+..++.... ..+..+..... .........
T Consensus 150 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~----~~~~~~~~~ 220 (321)
T cd05603 150 ---EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD--VSQMYDNILHK----PLQLPGGKT 220 (321)
T ss_pred ---CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC--HHHHHHHHhcC----CCCCCCCCC
Confidence 111234579999999999999999999999999999888765544432221 11111111110 000011111
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCHH
Q 002376 879 DCLITIIGSVGLSCTTESPGGRIGIR 904 (929)
Q Consensus 879 ~~~~~~~~~l~~~Cl~~dP~~RPs~~ 904 (929)
. .+.+++.+|++.||++||++.
T Consensus 221 ~----~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 221 V----AACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred H----HHHHHHHHHccCCHhhcCCCC
Confidence 1 223377799999999999864
No 187
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=3.6e-30 Score=288.66 Aligned_cols=169 Identities=21% Similarity=0.302 Sum_probs=139.3
Q ss_pred hhCCCCCceeecccCceeEEeccccCc----------HHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEe
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTGS----------WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF 728 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~----------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~ 728 (929)
...+|+..+.||+|+||.||+|+.... ......|+.++++++|||||++++++... ...++||||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e~ 138 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQNVNHPSVIRMKDTLVSG-----AITCMVLPH 138 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccccHHHHHHHHhCCCCCCcChhheEEeC-----CeeEEEEEc
Confidence 345799999999999999999987632 23456799999999999999999998653 347999999
Q ss_pred cCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCC
Q 002376 729 LSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799 (929)
Q Consensus 729 ~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~ 799 (929)
+. |+|.+++... ..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 139 ~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 210 (357)
T PHA03209 139 YS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA---- 210 (357)
T ss_pred cC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccC----
Confidence 94 6888877532 23467999999999998 9999999999999999999999999999753211
Q ss_pred CCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch
Q 002376 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI 843 (929)
Q Consensus 800 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~ 843 (929)
.......||+.|+|||++.+..++.++||||+|+++|++..
T Consensus 211 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~ 251 (357)
T PHA03209 211 ---PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLA 251 (357)
T ss_pred ---cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHH
Confidence 11233579999999999999999999999999998888654
No 188
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.96 E-value=7.1e-30 Score=273.24 Aligned_cols=216 Identities=22% Similarity=0.310 Sum_probs=155.9
Q ss_pred eeecccCceeEEeccccC-----------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 667 NLIGSGSFGSVLHNERTG-----------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~-----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+.||+|+||.||+|.... ..+.|.+|+.+++.++||||+++++++.... ..+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~-----~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGD-----ESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCC-----CcE
Confidence 368999999999986521 1246778999999999999999999986533 379
Q ss_pred EEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCc--------eEEecc
Q 002376 724 LVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMT--------AKVGDF 786 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~--------~ki~Df 786 (929)
+||||+++|+|.++++... .++.||+.|++|||+. +|+||||||+||+++.++. +|++||
T Consensus 76 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~ 152 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP 152 (258)
T ss_pred EEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccc
Confidence 9999999999999986432 2357899999999998 9999999999999987765 699999
Q ss_pred ccccccccccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChH-HH
Q 002376 787 GLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE-LR 864 (929)
Q Consensus 787 Gla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~ 864 (929)
|++..... .....+++.|||||++.+. .++.++||||+|++++++.... ..+... .++. ..
T Consensus 153 g~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~----~~~~~~---~~~~~~~ 215 (258)
T cd05078 153 GISITVLP----------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGG----DKPLSA---LDSQKKL 215 (258)
T ss_pred ccccccCC----------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCC----CCChhh---ccHHHHH
Confidence 98864321 1234678899999999874 5799999999998777754431 111110 0110 01
Q ss_pred HhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 002376 865 QLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLK 911 (929)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 911 (929)
.............+. ++ .+++.+||+.||++|||++|+++.|+
T Consensus 216 ~~~~~~~~~~~~~~~---~~-~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 216 QFYEDRHQLPAPKWT---EL-ANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HHHHccccCCCCCcH---HH-HHHHHHHhccChhhCCCHHHHHHhcC
Confidence 111111111111112 22 33777999999999999999998863
No 189
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.96 E-value=9.8e-30 Score=281.81 Aligned_cols=220 Identities=24% Similarity=0.263 Sum_probs=156.6
Q ss_pred eeecccCceeEEeccccC-------------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcceEEEEE
Q 002376 667 NLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
+.||+|+||+||+++... ..+.+.+|+.++.++ +||||+++++++.. ....|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT-----TSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe-----CCEEEEEE
Confidence 469999999999887541 123467899998888 69999999998854 33589999
Q ss_pred EecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 727 EFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 76 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--- 149 (327)
T cd05617 76 EYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP--- 149 (327)
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCC---
Confidence 9999999988775332 3467899999999998 9999999999999999999999999998743111
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLH 878 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 878 (929)
.......+||+.|||||++.+..++.++||||+|++++++..+..++.........-....+........ ...+
T Consensus 150 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~~p 223 (327)
T cd05617 150 ---GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP---IRIP 223 (327)
T ss_pred ---CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC---CCCC
Confidence 1112345799999999999999999999999999888887665555432211000000001111110000 0111
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCH
Q 002376 879 DCLITIIGSVGLSCTTESPGGRIGI 903 (929)
Q Consensus 879 ~~~~~~~~~l~~~Cl~~dP~~RPs~ 903 (929)
..+..-+.+++.+|++.||++||++
T Consensus 224 ~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 224 RFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCCCHHHHHHHHHHhccCHHHcCCC
Confidence 1122223347779999999999985
No 190
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.96 E-value=5.1e-30 Score=287.81 Aligned_cols=179 Identities=25% Similarity=0.282 Sum_probs=142.0
Q ss_pred hhCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCC-CCc
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS-KNM 719 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-~~~ 719 (929)
..++|+..+.||+|+||.||++.... ..+.+.+|+.+++.++||||+++++++..... ...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 45789999999999999999886541 13467789999999999999999998864332 122
Q ss_pred ceEEEEEEecCCCCccccccc------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHG------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
...|+||||+++ ++.+++.. ...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~~~~~~ 170 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence 357999999965 66665542 123467999999999998 99999999999999999999999999998542
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
.. .......||+.|+|||++.+..++.++||||+|++++++.....++
T Consensus 171 ~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf 218 (355)
T cd07874 171 TS-------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 218 (355)
T ss_pred Cc-------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 11 1123347899999999999999999999999999888765554433
No 191
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.96 E-value=1.1e-29 Score=280.07 Aligned_cols=217 Identities=24% Similarity=0.284 Sum_probs=155.7
Q ss_pred eeecccCceeEEeccccC-------------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcceEEEEE
Q 002376 667 NLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
++||+|+||.||+|+... ..+.+..|..++... +||||+++++++.. ....|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT-----KEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe-----CCEEEEEE
Confidence 469999999999987652 123456677777754 89999999999854 34589999
Q ss_pred EecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 727 EFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 76 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 149 (316)
T cd05620 76 EFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG--- 149 (316)
T ss_pred CCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccC---
Confidence 9999999998876432 2356899999999998 9999999999999999999999999998743111
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLH 878 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 878 (929)
.......+||+.|+|||++.+..++.++||||+|++++++..+..++..... . .+......... ..+
T Consensus 150 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~--~-----~~~~~~~~~~~---~~~ 216 (316)
T cd05620 150 ---DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE--D-----ELFESIRVDTP---HYP 216 (316)
T ss_pred ---CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--H-----HHHHHHHhCCC---CCC
Confidence 1122345799999999999999999999999999887776554443322211 1 11111100000 000
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCHH-HHH
Q 002376 879 DCLITIIGSVGLSCTTESPGGRIGIR-EAL 907 (929)
Q Consensus 879 ~~~~~~~~~l~~~Cl~~dP~~RPs~~-ev~ 907 (929)
..+..-+++++.+|++.||++||++. ++.
T Consensus 217 ~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 217 RWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 11112223377799999999999985 554
No 192
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-29 Score=278.13 Aligned_cols=228 Identities=25% Similarity=0.257 Sum_probs=175.6
Q ss_pred hCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccC-CccccceeeecccCCCCCc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~ 719 (929)
.+.|+..+.||+|.||.||+++.+. +.+.+.+|+++|+++. |||||.++++|.+..
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~---- 109 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD---- 109 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC----
Confidence 4578888999999999999987652 2357889999999998 999999999995543
Q ss_pred ceEEEEEEecCCCCcccccccc-------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC----CceEEecccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGE-------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE----MTAKVGDFGL 788 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~-------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~----~~~ki~DfGl 788 (929)
.+++|||++.||.|.+.+... .....||+.|++|||+. +|+|||+||+|+|+... +.+|++|||+
T Consensus 110 -~~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 110 -SVYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred -eEEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 589999999999999988653 12357899999999997 99999999999999533 5799999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhc
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMT 868 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 868 (929)
|+.... .......+||++|+|||++....|+..+||||.|++.|.+ ..+..|..... -.........
T Consensus 186 a~~~~~-------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiL-----L~G~~PF~~~~-~~~~~~~i~~ 252 (382)
T KOG0032|consen 186 AKFIKP-------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYIL-----LSGVPPFWGET-EFEIFLAILR 252 (382)
T ss_pred ceEccC-------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHH-----hhCCCCCcCCC-hhHHHHHHHc
Confidence 997642 2345667999999999999999999999999999766654 34444431110 0011112222
Q ss_pred ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 869 SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.+.....+.++.+.+-+++++.+|+..||.+|+|+.++++
T Consensus 253 ~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 253 GDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred CCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 2223333444556666777888999999999999999998
No 193
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.96 E-value=2.5e-29 Score=270.33 Aligned_cols=234 Identities=23% Similarity=0.322 Sum_probs=171.8
Q ss_pred CCCCCceeecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||+|+||.||+|... ...+.+.+|++++++++|+|++++++++... ..
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~-----~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN-----NE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC-----Ce
Confidence 57889999999999999998764 1245788999999999999999999998643 34
Q ss_pred EEEEEEecCCCCcccccccc------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGE------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
.++||||+++|+|.+++... ..++.+++.|++|||+. +|+||||||+||++++++.+|++|||++
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~ 153 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLG 153 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEecccee
Confidence 79999999999999887521 12256899999999998 9999999999999999999999999998
Q ss_pred cccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcc
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTS 869 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 869 (929)
+...... .......|++.|+|||++.+..++.++||||+|++++++.....++........+..+.........
T Consensus 154 ~~~~~~~------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 227 (267)
T cd08224 154 RFFSSKT------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPP 227 (267)
T ss_pred eeccCCC------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCC
Confidence 8653211 1122346889999999999889999999999998777754433222111101111111111110000
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQ 914 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~ 914 (929)
.. .......+.+++.+||+.+|++||++.+|+++|++++
T Consensus 228 -----~~-~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 228 -----LP-ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred -----CC-hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 00 0112223334777999999999999999999999875
No 194
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.96 E-value=2.2e-29 Score=268.86 Aligned_cols=225 Identities=23% Similarity=0.282 Sum_probs=167.3
Q ss_pred CCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
+|+..+.||+|+||.||++.... ..+.+.+|+.+++.++||||+++++++.+ ....++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEA-----DGHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEE-----CCEEEE
Confidence 46778999999999999886541 23567889999999999999999999854 345899
Q ss_pred EEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
||||+++|+|.+++...+ .++.+++.||+|||+. +|+|+||||+||++++++.++++|||.++....
T Consensus 76 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 152 (255)
T cd08219 76 VMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTS 152 (255)
T ss_pred EEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecc
Confidence 999999999998875321 2367899999999998 999999999999999999999999999976532
Q ss_pred ccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQT 874 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 874 (929)
.. .......|++.|+|||++.+..++.++||||+|++++++.....++..... .... ..+.. ....
T Consensus 153 ~~------~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~--~~~~-~~~~~---~~~~-- 218 (255)
T cd08219 153 PG------AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW--KNLI-LKVCQ---GSYK-- 218 (255)
T ss_pred cc------cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH--HHHH-HHHhc---CCCC--
Confidence 11 112235689999999999988999999999999999887665544432211 1100 00100 0000
Q ss_pred hhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 875 IQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 875 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
..+......+.+++.+||+.||++||++.|++.+
T Consensus 219 -~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 -PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 0001122233447789999999999999999864
No 195
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.96 E-value=1.1e-29 Score=279.93 Aligned_cols=217 Identities=26% Similarity=0.341 Sum_probs=157.0
Q ss_pred eeecccCceeEEeccccCc-------------------HHHHHHHHHHHHc-cCCccccceeeecccCCCCCcceEEEEE
Q 002376 667 NLIGSGSFGSVLHNERTGS-------------------WKSFIAECETLRN-VRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~~-------------------~~~~~~E~~~l~~-l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
+.||+|+||+||+|+.... .+.+..|..++.. .+||||+++++++.+. ...++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~-----~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTK-----ENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeC-----CEEEEEE
Confidence 4699999999999876521 2345667888876 4899999999998543 3589999
Q ss_pred EecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 727 EFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 76 ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 149 (316)
T cd05619 76 EYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG--- 149 (316)
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCC---
Confidence 9999999999886432 3367899999999998 9999999999999999999999999998743111
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLH 878 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 878 (929)
........||+.|||||++.+..++.++||||+|+++|++..+..++..... .+... .+.. ......
T Consensus 150 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--~~~~~-~i~~---~~~~~~---- 216 (316)
T cd05619 150 ---DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE--EELFQ-SIRM---DNPCYP---- 216 (316)
T ss_pred ---CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH--HHHHH-HHHh---CCCCCC----
Confidence 1122345799999999999999999999999999888876554443322111 11111 0110 000000
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCHH-HHH
Q 002376 879 DCLITIIGSVGLSCTTESPGGRIGIR-EAL 907 (929)
Q Consensus 879 ~~~~~~~~~l~~~Cl~~dP~~RPs~~-ev~ 907 (929)
.....-+++++.+|++.||++||++. ++.
T Consensus 217 ~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 217 RWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred ccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 11122233477799999999999997 554
No 196
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.96 E-value=5.7e-30 Score=280.50 Aligned_cols=233 Identities=18% Similarity=0.295 Sum_probs=168.3
Q ss_pred CCCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHcc-CCccccceeeecccCCCC
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSLDSK 717 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~ 717 (929)
++|...+.||+|+||.||++... ...+.+.+|+++++++ +||||+++++++...+
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-- 112 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG-- 112 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC--
Confidence 46888899999999999987531 1124688999999999 7999999999985433
Q ss_pred CcceEEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccc
Q 002376 718 NMEFLALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFG 787 (929)
Q Consensus 718 ~~~~~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfG 787 (929)
..++||||+++|+|.++++... .++.+++.|++|||+. +|+||||||+||++++++.+|++|||
T Consensus 113 ---~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg 186 (302)
T cd05055 113 ---PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFG 186 (302)
T ss_pred ---ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCc
Confidence 3799999999999999986432 2356899999999998 89999999999999999999999999
Q ss_pred cccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHh
Q 002376 788 LARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQL 866 (929)
Q Consensus 788 la~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~ 866 (929)
+++....... ........++..|+|||++.+..++.++||||+|++++++.. ...++...+. +......
T Consensus 187 ~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~------~~~~~~~ 256 (302)
T cd05055 187 LARDIMNDSN----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV------DSKFYKL 256 (302)
T ss_pred ccccccCCCc----eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc------hHHHHHH
Confidence 9986532211 011112346788999999999999999999999988777543 2222221111 1111111
Q ss_pred hcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 867 MTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
....... .........+.+++.+|++.+|++||++.|+++.|+++
T Consensus 257 ~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 257 IKEGYRM--AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHcCCcC--CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1100000 00001112233477799999999999999999999874
No 197
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.96 E-value=9.8e-30 Score=280.72 Aligned_cols=218 Identities=24% Similarity=0.282 Sum_probs=158.8
Q ss_pred eeecccCceeEEeccccC-------------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcceEEEEE
Q 002376 667 NLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
+.||+|+||+||+++... ..+.+.+|.++++.+ +||||+++++++.. ....|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~-----~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT-----KDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-----CCEEEEEE
Confidence 469999999999987642 123466788888887 69999999999854 33589999
Q ss_pred EecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 727 EFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 76 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 149 (318)
T cd05570 76 EYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG--- 149 (318)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcC---
Confidence 9999999998876432 2367899999999998 9999999999999999999999999998743111
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLH 878 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 878 (929)
.......+||+.|||||++.+..++.++||||+|++++++..+..++..... .+.. ...........
T Consensus 150 ---~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~--~~~~----~~i~~~~~~~~---- 216 (318)
T cd05570 150 ---GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE--DELF----QSILEDEVRYP---- 216 (318)
T ss_pred ---CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH--HHHH----HHHHcCCCCCC----
Confidence 1112335799999999999999999999999999887776554444322211 1100 00000011000
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCH-----HHHHH
Q 002376 879 DCLITIIGSVGLSCTTESPGGRIGI-----REALR 908 (929)
Q Consensus 879 ~~~~~~~~~l~~~Cl~~dP~~RPs~-----~ev~~ 908 (929)
..+...+.+++.+||+.||++||++ .++++
T Consensus 217 ~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 217 RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 1112223347779999999999999 77764
No 198
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.96 E-value=9.9e-30 Score=279.54 Aligned_cols=172 Identities=23% Similarity=0.348 Sum_probs=142.0
Q ss_pred CCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
++|+..+.||+|+||.||++.... ..+++.+|++++++++||||++++++|... .+.+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSD-----GEIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC-----CEEE
Confidence 468889999999999999986541 124578999999999999999999998543 3589
Q ss_pred EEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
+||||+++|+|.++++... .++.|++.||+|||+.+ +++||||||+||++++++.+||+|||+++.....
T Consensus 76 lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (308)
T cd06615 76 ICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 153 (308)
T ss_pred EEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc
Confidence 9999999999999986432 33678999999999732 8999999999999999999999999998754211
Q ss_pred cCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWV 847 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~ 847 (929)
......|+..|+|||++.+..++.++||||+|++++++.+...+
T Consensus 154 --------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p 197 (308)
T cd06615 154 --------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYP 197 (308)
T ss_pred --------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCC
Confidence 12234789999999999888899999999999888876655443
No 199
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.96 E-value=3.3e-29 Score=272.05 Aligned_cols=242 Identities=25% Similarity=0.323 Sum_probs=173.5
Q ss_pred CCCCCceeecccCceeEEecccc-------------------C--cHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT-------------------G--SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~-------------------~--~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
+.|+..+.||+|+||.||++++. . ..+.|.+|++++++++||||+++++++... ..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~---~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKP---GG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecC---CC
Confidence 35667789999999999998742 1 245799999999999999999999988542 23
Q ss_pred ceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
...++||||+++|+|.+++.... .++.+++.||+|||+. +++||||||+||+++.++.+|++|||.++
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAK 157 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccccc
Confidence 45799999999999999986433 2367899999999998 99999999999999999999999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhh--------ccChH
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQ--------VLDPE 862 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 862 (929)
........ ........++..|+|||++.+..++.++||||+|++++++.+...++...+..... .....
T Consensus 158 ~~~~~~~~---~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd05038 158 VLPEDKDY---YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTR 234 (284)
T ss_pred ccccCCcc---eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHH
Confidence 76422110 01111124566799999999889999999999999999976655333221111100 00111
Q ss_pred HHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 863 LRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 863 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
+........... ....+..++.+ ++.+||+.+|++||+|.||+++|+++
T Consensus 235 ~~~~~~~~~~~~-~~~~~~~~~~~-li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 235 LLELLKEGERLP-RPPSCPDEVYD-LMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHHcCCcCC-CCccCCHHHHH-HHHHHhccChhhCCCHHHHHHHHhhc
Confidence 111111111000 00111223334 88899999999999999999999976
No 200
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.96 E-value=6.4e-30 Score=278.33 Aligned_cols=236 Identities=23% Similarity=0.299 Sum_probs=163.1
Q ss_pred CCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHcc---CCccccceeeecccCCCCCcc
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNV---RHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l---~Hpniv~l~~~~~~~~~~~~~ 720 (929)
+|+..+.||+|+||+||+|+... ....+.+|+++++++ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 47788999999999999987652 123466788877765 799999999998764434445
Q ss_pred eEEEEEEecCCCCcccccccc----------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGE----------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~----------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
..++||||++ ++|.+++... +.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCccc
Confidence 6899999997 5888877532 12367899999999998 99999999999999999999999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhccC-------h
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQVLD-------P 861 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~~~-------~ 861 (929)
..... .......||..|+|||++.+..++.++||||+|++++++....-++..... ...++.+ .
T Consensus 157 ~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T cd07863 157 IYSCQ-------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 229 (288)
T ss_pred cccCc-------ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChh
Confidence 65321 112234689999999999999999999999999888776443322211111 0101000 0
Q ss_pred HHHH-------hhccc-chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 862 ELRQ-------LMTSN-ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 862 ~l~~-------~~~~~-~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.... ..... ..........+.+.+++++.+|++.||++|||+.|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 230 DWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred hCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000 00000 00000000112233445888999999999999999874
No 201
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.96 E-value=1.1e-29 Score=273.33 Aligned_cols=233 Identities=21% Similarity=0.299 Sum_probs=167.0
Q ss_pred HHHHhhCCCCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCC
Q 002376 655 ELRRATGNFSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 655 ~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 718 (929)
|++.+++++.....||+|+||.||+|.... ..+.+.+|++++++++||||+++++++...
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---- 77 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSEN---- 77 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccC----
Confidence 345677788888899999999999997541 245788999999999999999999998543
Q ss_pred cceEEEEEEecCCCCccccccccc-----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC-CCceEEecc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER-----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE-EMTAKVGDF 786 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~-----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~-~~~~ki~Df 786 (929)
...++||||+++++|.++++... .++.|++.|++|||+. +|+||||||+||+++. ++.+||+||
T Consensus 78 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~df 153 (268)
T cd06624 78 -GFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDF 153 (268)
T ss_pred -CEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecc
Confidence 35899999999999999886421 1246899999999998 9999999999999976 679999999
Q ss_pred ccccccccccCCCCCccccceeccccccccccccCCCC--CCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHH
Q 002376 787 GLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER--PSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELR 864 (929)
Q Consensus 787 Gla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 864 (929)
|.+....... .......|+..|+|||++.+.. ++.++||||+|++++++.....++................
T Consensus 154 g~~~~~~~~~------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~ 227 (268)
T cd06624 154 GTSKRLAGIN------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMF 227 (268)
T ss_pred hhheecccCC------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhh
Confidence 9987653211 1112235889999999987654 7899999999988777654433322211110001110000
Q ss_pred HhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 865 QLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
. ... ..+.....-+.+++.+||+.+|++||||.|+++
T Consensus 228 ~---~~~----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 228 K---IHP----EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred c---cCC----CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 0 000 011112222333777999999999999999875
No 202
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.96 E-value=8.4e-30 Score=272.47 Aligned_cols=227 Identities=25% Similarity=0.297 Sum_probs=163.8
Q ss_pred eeecccCceeEEecccc--------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 667 NLIGSGSFGSVLHNERT--------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~--------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
++||+|+||.||+|.+. ...+++.+|++++++++|||||++++++.. ...++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG------EPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC------CceEEEE
Confidence 46999999999988642 123568899999999999999999998742 2369999
Q ss_pred EecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 727 EFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
||+++|+|.+++.... .++.|++.|++|||+. +++||||||+||++++++.+||+|||+++........
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 75 ELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred EeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 9999999999986433 3367899999999998 8999999999999999999999999999866422111
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTIQL 877 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 877 (929)
........++..|+|||.+.+..++.++||||+|++++++.. ...++..... ..+......... ...
T Consensus 152 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~-------~~~~~~~~~~~~--~~~ 219 (257)
T cd05060 152 ---YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG-------AEVIAMLESGER--LPR 219 (257)
T ss_pred ---cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH-------HHHHHHHHcCCc--CCC
Confidence 111112234578999999999999999999999987766542 2222221111 111111111100 011
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhH
Q 002376 878 HDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQ 914 (929)
Q Consensus 878 ~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~ 914 (929)
+......+++++.+||..+|++||++.++++.|+++.
T Consensus 220 ~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 220 PEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 1112233445888999999999999999999998753
No 203
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.96 E-value=5e-30 Score=281.25 Aligned_cols=234 Identities=22% Similarity=0.287 Sum_probs=169.9
Q ss_pred CCCCCceeecccCceeEEecccc---------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
++|+..+.||+|+||.||+|.+. ....++.+|+.++++++||||++++++|...
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~----- 81 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP----- 81 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-----
Confidence 46777889999999999998642 0123678999999999999999999998542
Q ss_pred ceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
..++|+||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 82 -~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~ 157 (303)
T cd05110 82 -TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (303)
T ss_pred -CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccc
Confidence 2579999999999999886432 2357999999999998 99999999999999999999999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCc-hhhhccChHHHHhhc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPE-NVLQVLDPELRQLMT 868 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~-~~~~~~~~~l~~~~~ 868 (929)
....... ........++..|||||++.+..++.++||||+|++++++.. ...++...+. ...+.+ .
T Consensus 158 ~~~~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~--------~ 225 (303)
T cd05110 158 LLEGDEK----EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL--------E 225 (303)
T ss_pred cccCccc----ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH--------H
Confidence 6532211 011122345778999999999999999999999988777543 2222221111 111111 1
Q ss_pred ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 869 SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
..... .....+...+.. ++.+||..+|++||+|+|+++.++++....
T Consensus 226 ~~~~~-~~~~~~~~~~~~-li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 226 KGERL-PQPPICTIDVYM-VMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred CCCCC-CCCCCCCHHHHH-HHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 00000 000111223333 788999999999999999999999986654
No 204
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.96 E-value=2.4e-29 Score=270.92 Aligned_cols=234 Identities=21% Similarity=0.293 Sum_probs=166.2
Q ss_pred CCCCceeecccCceeEEecccc--------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 662 NFSHENLIGSGSFGSVLHNERT--------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~--------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
+|+..+.||+|+||.||+|... ...++|..|+.++++++||||+++++++... ..
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~-----~~ 79 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS-----RP 79 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCC-----Cc
Confidence 4677899999999999987643 1135788999999999999999999998543 34
Q ss_pred EEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.++||||+++|+|.++++... .++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++..
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 80 VMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred eEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccc
Confidence 799999999999999886422 2356899999999998 9999999999999999999999999998865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
........ ........++..|+|||++.+..++.++||||+|++++++.. ...++..... . ..........
T Consensus 157 ~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~--~-----~~~~~i~~~~ 228 (269)
T cd05065 157 EDDTSDPT-YTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--Q-----DVINAIEQDY 228 (269)
T ss_pred ccCccccc-cccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH--H-----HHHHHHHcCC
Confidence 32211110 001111122457999999999999999999999988777432 2222211111 1 1111111100
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
+.......+..+.+++.+||+.+|++||+|++++.+|+++
T Consensus 229 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 229 --RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred --cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0000011122233477899999999999999999998875
No 205
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.96 E-value=1.1e-29 Score=274.32 Aligned_cols=215 Identities=22% Similarity=0.259 Sum_probs=152.9
Q ss_pred eecccCceeEEecccc----------------------------------------CcHHHHHHHHHHHHccCCccccce
Q 002376 668 LIGSGSFGSVLHNERT----------------------------------------GSWKSFIAECETLRNVRHRNLVKL 707 (929)
Q Consensus 668 ~iG~G~~g~Vy~~~~~----------------------------------------~~~~~~~~E~~~l~~l~Hpniv~l 707 (929)
.||+|+||.||+|... ...++|.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 5899999999998742 012467789999999999999999
Q ss_pred eeecccCCCCCcceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC
Q 002376 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE 778 (929)
Q Consensus 708 ~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~ 778 (929)
+++|.+.. ..++||||+++|+|.++++..+ .++.|+++||+|||+. +|+||||||+||++++.
T Consensus 82 ~~~~~~~~-----~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 82 HGVCVRGS-----ENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARL 153 (274)
T ss_pred EEEEEeCC-----ceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEecc
Confidence 99996533 4799999999999998886422 2367999999999998 99999999999999764
Q ss_pred C-------ceEEeccccccccccccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhhhc
Q 002376 779 M-------TAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVESN 850 (929)
Q Consensus 779 ~-------~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~~~ 850 (929)
+ .+|++|||+++.... .....++..|+|||++.+ ..++.++||||+|++++++.+ .+.
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~----------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~----~g~ 219 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALS----------REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICF----DGE 219 (274)
T ss_pred CcccCccceeeecCCcccccccc----------ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHh----CCC
Confidence 4 479999998864321 112357888999998876 458999999999987776421 122
Q ss_pred CCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 002376 851 LPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRL 910 (929)
Q Consensus 851 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L 910 (929)
.|.. ..................... ...+.+ ++.+||+.+|++||+|.++++.|
T Consensus 220 ~p~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~-li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 220 VPLK--ERTPSEKERFYEKKHRLPEPS---CKELAT-LISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred CCcc--ccChHHHHHHHHhccCCCCCC---ChHHHH-HHHHHcccChhhCcCHHHHHHhh
Confidence 2210 000111111111111000001 122333 78899999999999999999876
No 206
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.96 E-value=1.9e-29 Score=270.55 Aligned_cols=216 Identities=21% Similarity=0.266 Sum_probs=154.4
Q ss_pred eeecccCceeEEecccc----------------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCC
Q 002376 667 NLIGSGSFGSVLHNERT----------------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~----------------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 718 (929)
+.||+|+||.||+|+.. ...+.|.+|+.+++.++||||+++++++....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~--- 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV--- 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---
Confidence 36899999999999732 11236778899999999999999999986433
Q ss_pred cceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCc-------eE
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMT-------AK 782 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~-------~k 782 (929)
..++||||+++|+|..+++... .++.||+.||+|||+. +|+||||||+|||++.++. +|
T Consensus 78 --~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~ 152 (262)
T cd05077 78 --ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIK 152 (262)
T ss_pred --CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeE
Confidence 3699999999999988876321 3467999999999998 9999999999999987664 89
Q ss_pred EeccccccccccccCCCCCccccceeccccccccccccC-CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccCh
Q 002376 783 VGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGL-GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDP 861 (929)
Q Consensus 783 i~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (929)
++|||++..... .....|+..|||||++. +..++.++||||+|+++|++.. .+..|..... ..
T Consensus 153 l~d~g~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~----~~~~p~~~~~--~~ 216 (262)
T cd05077 153 LSDPGIPITVLS----------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICY----NGEIPLKDKT--LA 216 (262)
T ss_pred eCCCCCCccccC----------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHh----CCCCCCCCcc--hh
Confidence 999999875421 12236788999999887 4668999999999988777531 1222221000 00
Q ss_pred HHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 002376 862 ELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRL 910 (929)
Q Consensus 862 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L 910 (929)
..............+. ...+ ++++.+||+.||++||++.|+++.+
T Consensus 217 ~~~~~~~~~~~~~~~~---~~~~-~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 217 EKERFYEGQCMLVTPS---CKEL-ADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHHHHHhcCccCCCCC---hHHH-HHHHHHHcCCChhhCcCHHHHHHhc
Confidence 1111000000000111 1222 3378899999999999999999875
No 207
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.96 E-value=1.3e-29 Score=286.32 Aligned_cols=178 Identities=24% Similarity=0.306 Sum_probs=140.2
Q ss_pred CCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+|+..+.||+|+||.||++.... ..+++.+|+++++.++||||+++++++...+.......|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 47788999999999999987531 235678999999999999999999998765432233689
Q ss_pred EEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
+||||+. ++|.+++.... .++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 81 lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred EEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence 9999996 57877664322 2367899999999998 9999999999999999999999999999864321
Q ss_pred cCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
. ........+|+.|+|||++.+. .++.++||||+|++++++..+..++
T Consensus 157 ~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf 205 (372)
T cd07853 157 E-----SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILF 205 (372)
T ss_pred c-----cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCC
Confidence 1 1112234689999999998875 4799999999998888865554433
No 208
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.96 E-value=1e-29 Score=276.82 Aligned_cols=232 Identities=22% Similarity=0.321 Sum_probs=166.6
Q ss_pred hCCCCCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHccCCccccceeeecccCCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSK 717 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 717 (929)
.++|+..+.||+|+||.||+++..+ ..++|.+|+.++++++||||+++++++...+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~-- 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK-- 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC--
Confidence 4578889999999999999976421 1356889999999999999999999986533
Q ss_pred CcceEEEEEEecCCCCcccccccc------------------------------ccccccHHHHHHHhhhCCCCCEEecC
Q 002376 718 NMEFLALVYEFLSNGSLGDWIHGE------------------------------RKNELDITSALDYLHNDCEVPVVHSD 767 (929)
Q Consensus 718 ~~~~~~lV~e~~~~gsL~~~l~~~------------------------------~~~~~~ia~aL~yLH~~~~~~iiHrD 767 (929)
..++||||+++|+|.++++.. ..++.|++.||+|||+. +++|||
T Consensus 82 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~d 155 (288)
T cd05050 82 ---PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRD 155 (288)
T ss_pred ---ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceeccc
Confidence 379999999999999998632 12467899999999998 999999
Q ss_pred CCCCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHH
Q 002376 768 LKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKW 846 (929)
Q Consensus 768 lk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~ 846 (929)
|||+||++++++.+||+|||+++.+..... ........++..|+|||++.+..++.++||||+|++++++.. ...
T Consensus 156 l~p~nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~ 231 (288)
T cd05050 156 LATRNCLVGENMVVKIADFGLSRNIYSADY----YKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQ 231 (288)
T ss_pred ccHhheEecCCCceEECccccceecccCcc----ccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999876532111 001112234678999999998999999999999988777532 111
Q ss_pred hhhcCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 847 VESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 847 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
++... ...+ ............. ...+..++.+ ++.+|++.+|++|||+.|+++.|++
T Consensus 232 p~~~~--~~~~-----~~~~~~~~~~~~~-~~~~~~~l~~-li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 232 PYYGM--AHEE-----VIYYVRDGNVLSC-PDNCPLELYN-LMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred CCCCC--CHHH-----HHHHHhcCCCCCC-CCCCCHHHHH-HHHHHcccCcccCCCHHHHHHHhhC
Confidence 11111 1111 1111100000000 0011123333 7889999999999999999999874
No 209
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.96 E-value=7.1e-30 Score=273.54 Aligned_cols=229 Identities=22% Similarity=0.321 Sum_probs=167.2
Q ss_pred CCCCCceeecccCceeEEeccccC--------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG--------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~--------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
++|...+.||+|+||.||++.... ..+.|.+|++++++++|||++++++++.. ...++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~v~ 79 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE------EPIYIVT 79 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcC------CCcEEEE
Confidence 457788999999999999987541 23578899999999999999999998732 2368999
Q ss_pred EecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccccc
Q 002376 727 EFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 796 (929)
||+++|+|.++++... .++.+++.||+|||+. +++||||||+||++++++.+||+|||.++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 9999999999886421 2356899999999998 89999999999999999999999999998653211
Q ss_pred CCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhh
Q 002376 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTI 875 (929)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 875 (929)
. .......++..|+|||+..+..++.++||||+|++++++.. ...++.... +............ .
T Consensus 157 ~-----~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-------~~~~~~~~~~~~~--~ 222 (260)
T cd05069 157 Y-----TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV-------NREVLEQVERGYR--M 222 (260)
T ss_pred c-----cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC-------HHHHHHHHHcCCC--C
Confidence 0 11112346778999999998899999999999987776543 222221111 1111111111100 0
Q ss_pred hhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 876 QLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 876 ~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
..+...+..+++++.+||+.||++||++++|.+.|++
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1111122334457779999999999999999999875
No 210
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.96 E-value=3.4e-29 Score=268.61 Aligned_cols=231 Identities=23% Similarity=0.327 Sum_probs=162.8
Q ss_pred eeecccCceeEEecccc--------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 667 NLIGSGSFGSVLHNERT--------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~--------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
+.||+|+||.||+|... ...+.+.+|+.+++.++||||+++++++...+ ...++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE----GSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCC----CCcEEEE
Confidence 46899999999987632 11346788999999999999999999875432 2368999
Q ss_pred EecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 727 EFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
||+++|+|.++++... ..+.+++.|++|||+. +++||||||+||++++++.+||+|||+++.+.....
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 77 PYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 9999999999986322 2246899999999997 999999999999999999999999999986532110
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQL 877 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 877 (929)
. .........++..|+|||++.+..++.++||||+|++++++.... ..+..... ............. ...
T Consensus 154 ~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~----~~~~~~~~--~~~~~~~~~~~~~--~~~ 223 (262)
T cd05058 154 Y--SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG----APPYPDVD--SFDITVYLLQGRR--LLQ 223 (262)
T ss_pred e--eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCC----CCCCCCCC--HHHHHHHHhcCCC--CCC
Confidence 0 011112335677899999998889999999999998777653321 11110000 0011111111000 000
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhH
Q 002376 878 HDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQ 914 (929)
Q Consensus 878 ~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~ 914 (929)
.+..+..+.+++.+||+.+|++||++.|+++.|+++.
T Consensus 224 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 224 PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 1111222334888999999999999999999999875
No 211
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96 E-value=1.4e-29 Score=285.19 Aligned_cols=179 Identities=24% Similarity=0.280 Sum_probs=142.8
Q ss_pred hhCCCCCceeecccCceeEEecccc------------------CcHHHHHHHHHHHHccCCccccceeeecccCCC-CCc
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERT------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDS-KNM 719 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-~~~ 719 (929)
..++|+..+.||+|+||.||++... ...+.+.+|+.+++.++||||+++++++...+. ...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3568999999999999999988653 123467789999999999999999998754332 122
Q ss_pred ceEEEEEEecCCCCcccccccc------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGE------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
...|+||||+++ ++.+++... ..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 177 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence 357999999964 676665421 23467999999999998 99999999999999999999999999998642
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
.. .......||+.|+|||++.+..++.++||||+|+++|++..+..++
T Consensus 178 ~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf 225 (364)
T cd07875 178 TS-------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225 (364)
T ss_pred CC-------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCC
Confidence 11 1123347899999999999999999999999999888876655444
No 212
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.96 E-value=2.8e-29 Score=270.07 Aligned_cols=233 Identities=21% Similarity=0.271 Sum_probs=167.5
Q ss_pred CCCCCceeecccCceeEEecccc--------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT--------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~--------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
++|+..+.||+|+||.||+|+.. ...+.|.+|+.++++++||||+++++++... .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 78 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS-----K 78 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC-----C
Confidence 46778899999999999987642 1135788999999999999999999998543 3
Q ss_pred eEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..++||||+++|+|.+++.... .++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++.
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~ 155 (267)
T cd05066 79 PVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRV 155 (267)
T ss_pred ccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccc
Confidence 4799999999999999986431 2356899999999998 999999999999999999999999999987
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
+..... .........++..|+|||++.+..++.++||||+|++++++.. ...++..... .+ ........
T Consensus 156 ~~~~~~---~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~--~~-----~~~~~~~~ 225 (267)
T cd05066 156 LEDDPE---AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN--QD-----VIKAIEEG 225 (267)
T ss_pred cccccc---eeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH--HH-----HHHHHhCC
Confidence 642211 0111112234568999999998899999999999987776432 2222211111 11 11111100
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
.. .+.....+..+.+++.+|++.+|++||+|.++++.|+++
T Consensus 226 ~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 226 YR--LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred Cc--CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 00 000001112233477899999999999999999999875
No 213
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.96 E-value=1.7e-29 Score=279.07 Aligned_cols=173 Identities=25% Similarity=0.334 Sum_probs=134.1
Q ss_pred ceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEec
Q 002376 666 ENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFL 729 (929)
Q Consensus 666 ~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~ 729 (929)
.++||+|+||+||+|+... ....+.+|++++++++||||+++++++... .....++||||+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv~e~~ 82 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSH---SDRKVWLLFDYA 82 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEecc---CCCeEEEEEeee
Confidence 3689999999999997531 124678999999999999999999988653 234579999999
Q ss_pred CCCCcccccccc-----------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeee----cCCCceEEecccc
Q 002376 730 SNGSLGDWIHGE-----------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILL----DEEMTAKVGDFGL 788 (929)
Q Consensus 730 ~~gsL~~~l~~~-----------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl----~~~~~~ki~DfGl 788 (929)
+ ++|.+++... +.++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||+
T Consensus 83 ~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 83 E-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred C-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 6 4776665311 13356899999999998 99999999999999 5677999999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
++....... .........||+.|+|||++.+. .++.++||||+|++++++.+...++
T Consensus 159 a~~~~~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f 216 (317)
T cd07867 159 ARLFNSPLK---PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216 (317)
T ss_pred eeccCCCcc---cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCc
Confidence 986532211 11122345789999999998764 5899999999999888876655443
No 214
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.96 E-value=1.1e-29 Score=271.49 Aligned_cols=227 Identities=24% Similarity=0.322 Sum_probs=167.3
Q ss_pred CCCCCceeecccCceeEEeccccC-------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYE 727 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e 727 (929)
++|+..+.||+|+||.||+|...+ ..+++.+|+.++++++||||+++++++... ...++|||
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~~v~e 80 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQG-----NPLYIVTE 80 (256)
T ss_pred hhccceeeeecCCCceEEEEEecCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCC-----CCeEEEEE
Confidence 467888999999999999887652 245788999999999999999999998653 33799999
Q ss_pred ecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 728 FLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 728 ~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
|+++++|.++++... .++.|++.|++|||+. +++||||||+||++++++.+||+|||.++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~- 156 (256)
T cd05039 81 YMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ- 156 (256)
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccccccccc-
Confidence 999999999986432 2357899999999998 99999999999999999999999999998653211
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTIQ 876 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 876 (929)
....++..|+|||++.++.++.++||||+|++++++.. ...++...+. .+ +.......... .
T Consensus 157 --------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~-----~~~~~~~~~~~--~ 219 (256)
T cd05039 157 --------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KD-----VVPHVEKGYRM--E 219 (256)
T ss_pred --------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH--HH-----HHHHHhcCCCC--C
Confidence 11234678999999998899999999999987766532 2222111111 11 11111000000 0
Q ss_pred hhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 877 LHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 877 ~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
.+...+..+.+++.+|++.+|++||+++|++++|+.+
T Consensus 220 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 220 APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 0011112233377799999999999999999999763
No 215
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.96 E-value=1.1e-29 Score=273.28 Aligned_cols=229 Identities=21% Similarity=0.261 Sum_probs=164.6
Q ss_pred hCCCCCceeecccCceeEEecccc----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
.++|+..+.||+|+||.||+|+.. ...+.+.+|+.++++++||||+++++++... ...+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~-----~~~~ 82 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSR-----EKLW 82 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-----CEEE
Confidence 347888999999999999998753 1234577899999999999999999998543 3589
Q ss_pred EEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
+||||+++|+|.++++... .++.|++.|++|||+. +|+|||+||+||++++++.+||+|||+++.+...
T Consensus 83 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06646 83 ICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITAT 159 (267)
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccc
Confidence 9999999999999886332 2367899999999998 9999999999999999999999999999865321
Q ss_pred cCCCCCccccceeccccccccccccC---CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhccChHHHHhhccc
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGL---GERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQVLDPELRQLMTSN 870 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~ 870 (929)
. .......|++.|+|||++. ...++.++||||+|++++++.....++..... ........... ...
T Consensus 160 ~------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~---~~~ 230 (267)
T cd06646 160 I------AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQ---PPK 230 (267)
T ss_pred c------cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCC---CCC
Confidence 1 1122346889999999874 34578899999999887776544333221111 00000000000 000
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
.... ......+.+++.+||+.+|++||+++++++.
T Consensus 231 ~~~~----~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 231 LKDK----TKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred Cccc----cccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 0000 0112233347779999999999999999864
No 216
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.96 E-value=1.8e-29 Score=273.85 Aligned_cols=241 Identities=21% Similarity=0.275 Sum_probs=174.3
Q ss_pred CChHHHHHhhCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHcc-CCccccceeeecccC
Q 002376 651 ISYDELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNV-RHRNLVKLITSCSSL 714 (929)
Q Consensus 651 ~~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~ 714 (929)
.++.++..+.+.|+..+.||+|+||.||+|.... ...++..|+.+++++ +||||+++++++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 4677777888999999999999999999987641 234678899999998 699999999998653
Q ss_pred CC-CCcceEEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEE
Q 002376 715 DS-KNMEFLALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKV 783 (929)
Q Consensus 715 ~~-~~~~~~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki 783 (929)
.. ......++||||+++|+|.+++...+ .+..|++.|++|||+. +|+|||+||+||++++++.+||
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~l 162 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKL 162 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEE
Confidence 32 12356899999999999999886422 2246899999999998 9999999999999999999999
Q ss_pred eccccccccccccCCCCCccccceeccccccccccccC-----CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhc
Q 002376 784 GDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGL-----GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQV 858 (929)
Q Consensus 784 ~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~ 858 (929)
+|||+++..... ........|++.|+|||++. +..++.++||||+|++++++.....++..... ....
T Consensus 163 ~dfg~~~~~~~~------~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~-~~~~ 235 (282)
T cd06636 163 VDFGVSAQLDRT------VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP-MRAL 235 (282)
T ss_pred eeCcchhhhhcc------ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCH-Hhhh
Confidence 999998755321 11123356899999999876 34688999999999887776555444322211 1111
Q ss_pred cChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 859 LDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 859 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
. . .... .............+. +++.+||+.||++||++.|+++
T Consensus 236 ~-~-~~~~----~~~~~~~~~~~~~~~-~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 236 F-L-IPRN----PPPKLKSKKWSKKFI-DFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred h-h-HhhC----CCCCCcccccCHHHH-HHHHHHhCCChhhCcCHHHHhc
Confidence 0 0 0000 000000001112233 3777999999999999999874
No 217
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.96 E-value=1.2e-29 Score=277.25 Aligned_cols=227 Identities=23% Similarity=0.254 Sum_probs=167.9
Q ss_pred CCCCCceeecccCceeEEecccc----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
.+|+..+.||+|+||.||+|... ...+.+.+|+.+++.++||||+++++++... ...++
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~-----~~~~l 94 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-----DELWV 94 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeC-----CEEEE
Confidence 47888899999999999998643 1245788999999999999999999988542 35899
Q ss_pred EEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 725 VYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
||||+++|+|.++++... .++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 95 v~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~- 170 (296)
T cd06654 95 VMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ- 170 (296)
T ss_pred eecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhccccc-
Confidence 999999999999886432 3356899999999998 99999999999999999999999999988653211
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQL 877 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 877 (929)
.......|++.|+|||++.+..++.++||||+|++++++..+..++..... .. ........ .......
T Consensus 171 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~-~~-----~~~~~~~~-~~~~~~~ 238 (296)
T cd06654 171 -----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-LR-----ALYLIATN-GTPELQN 238 (296)
T ss_pred -----cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCH-HH-----hHHHHhcC-CCCCCCC
Confidence 111234688999999999988899999999999887776554433321110 00 00000000 0000111
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 878 HDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 878 ~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.+.+...+.+++.+||..+|++||++.|+++
T Consensus 239 ~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 239 PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred ccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 1223333445888999999999999999986
No 218
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=1.1e-29 Score=272.52 Aligned_cols=225 Identities=21% Similarity=0.266 Sum_probs=172.1
Q ss_pred CCCCCceeecccCceeEEecccc-----------------CcHHHHHHHHHHHHccC-CccccceeeecccCCCCCcceE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT-----------------GSWKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~-----------------~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
..|+..+.||+||.++||++... ....-|.+|+..|.+++ |.+||++++|-.. .+++
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~-----d~~l 435 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT-----DGYL 435 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc-----CceE
Confidence 35777889999999999998765 22456889999999995 9999999999753 4579
Q ss_pred EEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
||||||- .-+|.++|++.. .+..|++.|+.++|.+ +|||.||||.|+|+-. |.+||.|||.|..+.
T Consensus 436 YmvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 436 YMVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQ 510 (677)
T ss_pred EEEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccC
Confidence 9999986 468999887543 2356899999999998 9999999999999974 689999999999875
Q ss_pred cccCCCCCccccceeccccccccccccCCC-----------CCCCCCCCCCCcCCCCCcchhHHhhhcCCc---hhhhcc
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGE-----------RPSTAGDVPTSESFAGEFNIVKWVESNLPE---NVLQVL 859 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~---~~~~~~ 859 (929)
.+..+ .....-+||+.||+||.+... +++.++||||+||++|+|....-+++.++. ++..+.
T Consensus 511 ~DTTs----I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~ 586 (677)
T KOG0596|consen 511 PDTTS----IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAIT 586 (677)
T ss_pred ccccc----eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhc
Confidence 43222 122345899999999987532 367999999999999988777777777764 344555
Q ss_pred ChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 860 DPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 860 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
|+...-.++.-... .+++. +|..|+++||++||+..|+++
T Consensus 587 ~P~~~Iefp~~~~~--------~~li~-~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 587 DPNHEIEFPDIPEN--------DELID-VMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred CCCccccccCCCCc--------hHHHH-HHHHHHhcCcccCCCcHHHhc
Confidence 55332211111111 11444 777999999999999999875
No 219
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.96 E-value=2e-29 Score=272.38 Aligned_cols=230 Identities=20% Similarity=0.278 Sum_probs=166.8
Q ss_pred CCCCCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCC
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 718 (929)
++|+..+.||+|+||.||+|+... ..+.|.+|++++++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 80 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREA---- 80 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCC----
Confidence 467888999999999999987420 135688999999999999999999998543
Q ss_pred cceEEEEEEecCCCCccccccccc-----------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCce
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER-----------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA 781 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~-----------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ 781 (929)
...++||||+++|+|.++++..+ .+..|++.||+|||+. +|+||||||+||++++++.+
T Consensus 81 -~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~ 156 (275)
T cd05046 81 -EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREV 156 (275)
T ss_pred -CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcE
Confidence 34799999999999999986433 1246899999999998 89999999999999999999
Q ss_pred EEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccC
Q 002376 782 KVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLD 860 (929)
Q Consensus 782 ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~ 860 (929)
|++|||+++..... .........++..|+|||.+.+..++.++||||+|++++++.. ...++.... +
T Consensus 157 ~l~~~~~~~~~~~~-----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~-------~ 224 (275)
T cd05046 157 KVSLLSLSKDVYNS-----EYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLS-------D 224 (275)
T ss_pred EEcccccccccCcc-----cccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccc-------h
Confidence 99999998754211 1111223356788999999988889999999999987776433 222222111 1
Q ss_pred hHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 002376 861 PELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLK 911 (929)
Q Consensus 861 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 911 (929)
............. .......+..+.+++.+||+.+|++||++.|++++|+
T Consensus 225 ~~~~~~~~~~~~~-~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 225 EEVLNRLQAGKLE-LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHHHHHHHcCCcC-CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 1111111000000 0001112233444788999999999999999999885
No 220
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.96 E-value=1.9e-29 Score=273.28 Aligned_cols=234 Identities=21% Similarity=0.302 Sum_probs=169.6
Q ss_pred CCCCCceeecccCceeEEecccc---------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
++|+..+.||+|+||.||+|... ...+++.+|+.++++++||||++++++|..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS------ 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 46777899999999999998642 113568899999999999999999999864
Q ss_pred ceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
...++||||+++|+|.++++... ..+.|++.|++|||+. +++||||||+||++++++.+||+|||.++
T Consensus 81 ~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~ 157 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (279)
T ss_pred CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccc
Confidence 23799999999999999886432 2357899999999997 99999999999999999999999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTS 869 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~ 869 (929)
........ .......++..|+|||.+....++.++||||+|++++++.. ...++...+ .. .+......
T Consensus 158 ~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~-----~~~~~~~~ 226 (279)
T cd05057 158 LLDVDEKE----YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP--AV-----EIPDLLEK 226 (279)
T ss_pred cccCcccc----eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC--HH-----HHHHHHhC
Confidence 76422110 11111234678999999988899999999999987776543 222221111 11 11111111
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
...... ...+...+. +++.+||..+|++||++.++++.|+++.+.
T Consensus 227 ~~~~~~-~~~~~~~~~-~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 227 GERLPQ-PPICTIDVY-MVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred CCCCCC-CCCCCHHHH-HHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 100000 001112233 378899999999999999999999998664
No 221
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.96 E-value=2.1e-29 Score=274.86 Aligned_cols=242 Identities=17% Similarity=0.252 Sum_probs=161.2
Q ss_pred CCCCCceeecccCceeEEeccccCc---------------HHH---------------HHHHHHHHHccCCccccceeee
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTGS---------------WKS---------------FIAECETLRNVRHRNLVKLITS 710 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~~---------------~~~---------------~~~E~~~l~~l~Hpniv~l~~~ 710 (929)
++|+..++||+|+||+||+|..... .+. ...+...+..++|+++++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 5789999999999999999875422 001 1122334556789999999997
Q ss_pred cccCCCCCcceEEEEEEecCCCCcccccccc--------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceE
Q 002376 711 CSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAK 782 (929)
Q Consensus 711 ~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~--------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 782 (929)
+..... ...+.++++|++. .++.+.+... ..++.|++.||+|||+. +|+||||||+|||+++++.+|
T Consensus 92 ~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~~~ 166 (294)
T PHA02882 92 GSFKRC-RMYYRFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRGY 166 (294)
T ss_pred eeEecC-CceEEEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCcEE
Confidence 654332 2334578888774 3554444321 13578999999999998 999999999999999999999
Q ss_pred EeccccccccccccCCCC-CccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhcc
Q 002376 783 VGDFGLARFLLERVDNQS-SISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQVL 859 (929)
Q Consensus 783 i~DfGla~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~~ 859 (929)
|+|||+|+.+........ .........||+.|+|||+..+..++.++||||+|++++++.....++..... ......
T Consensus 167 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~ 246 (294)
T PHA02882 167 IIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAA 246 (294)
T ss_pred EEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHh
Confidence 999999987632211110 11112334799999999999999999999999999877776555555443321 111111
Q ss_pred ChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 002376 860 DPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLK 911 (929)
Q Consensus 860 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 911 (929)
.......+.... .....+. +.+.+++..|+..+|++||++.++.+.++
T Consensus 247 ~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 247 KCDFIKRLHEGK---IKIKNAN-KFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHHHHHHhhhhh---hccCCCC-HHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 111111111111 1111222 22334777999999999999999998763
No 222
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.96 E-value=4.3e-29 Score=270.60 Aligned_cols=231 Identities=23% Similarity=0.335 Sum_probs=164.6
Q ss_pred CCCCceeecccCceeEEecccc---------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 662 NFSHENLIGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
+|+..++||+|+||.||++... ...+.|.+|++++++++||||+++++++....
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 80 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGR----- 80 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC-----
Confidence 5667789999999999987521 12357889999999999999999999985433
Q ss_pred eEEEEEEecCCCCccccccccc-----------------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC
Q 002376 721 FLALVYEFLSNGSLGDWIHGER-----------------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE 777 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~-----------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~ 777 (929)
..++||||+++|+|.++++... ..+.|++.|++|||+. +++||||||+||++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~ 157 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQ 157 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcC
Confidence 3799999999999999886321 1246899999999998 9999999999999999
Q ss_pred CCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhh
Q 002376 778 EMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQ 857 (929)
Q Consensus 778 ~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~ 857 (929)
++.+||+|||+++....... ........+++.|+|||++.+..++.++||||+|++++++.. .+..|.. +
T Consensus 158 ~~~~kL~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~----~g~~p~~--~ 227 (280)
T cd05092 158 GLVVKIGDFGMSRDIYSTDY----YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFT----YGKQPWY--Q 227 (280)
T ss_pred CCCEEECCCCceeEcCCCce----eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHc----CCCCCCc--c
Confidence 99999999999975532110 011122345788999999999999999999999987777533 1222210 0
Q ss_pred ccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 858 VLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 858 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
.-+............. ..+...+.-+++++.+||+.||++||+++||.+.|++
T Consensus 228 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 228 LSNTEAIECITQGREL--ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred CCHHHHHHHHHcCccC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 0001111100000000 0001112223347789999999999999999998863
No 223
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.96 E-value=6.3e-29 Score=269.35 Aligned_cols=237 Identities=18% Similarity=0.243 Sum_probs=172.0
Q ss_pred hCCCCCceeecccCceeEEeccccC---------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG---------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~---------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 718 (929)
.++|+..+.||+|+||.||+|.... ..+.+.+|+.++++++||||+++++++....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~--- 81 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG--- 81 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC---
Confidence 4578888999999999999987542 1345788999999999999999999986532
Q ss_pred cceEEEEEEecCCCCccccccccc----------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceE
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER----------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAK 782 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~----------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 782 (929)
...++++||+++|+|.+++...+ .++.+++.||+|||+. +++||||||+||++++++.+|
T Consensus 82 -~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~k 157 (280)
T cd05043 82 -EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVK 157 (280)
T ss_pred -CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEE
Confidence 34799999999999999886421 2356899999999987 999999999999999999999
Q ss_pred EeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccCh
Q 002376 783 VGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDP 861 (929)
Q Consensus 783 i~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~ 861 (929)
|+|||+++.+...... .......++..|+|||++.+..++.++||||+|++++++.. ...++..... .
T Consensus 158 l~d~g~~~~~~~~~~~----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-------~ 226 (280)
T cd05043 158 ITDNALSRDLFPMDYH----CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP-------F 226 (280)
T ss_pred ECCCCCcccccCCceE----EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH-------H
Confidence 9999999865322110 01122346778999999998899999999999987776543 3222221111 1
Q ss_pred HHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 862 ELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 862 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
.+............ ...+...+ .+++.+||+.||++|||+.|+++.|+++..+
T Consensus 227 ~~~~~~~~~~~~~~-~~~~~~~~-~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 227 EMAAYLKDGYRLAQ-PINCPDEL-FAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred HHHHHHHcCCCCCC-CCcCCHHH-HHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 11111111100000 00111122 3377799999999999999999999998753
No 224
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.96 E-value=1.5e-29 Score=274.77 Aligned_cols=224 Identities=23% Similarity=0.299 Sum_probs=162.8
Q ss_pred CCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 663 FSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
|+..+.||+|+||.||++.... ..+.+.+|+.++++++|++++++++++.+. ...+
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~-----~~~~ 76 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETK-----DALC 76 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecC-----CEEE
Confidence 6677899999999999876641 123467899999999999999999998543 3489
Q ss_pred EEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
+||||+++|+|.+++.... .++.|++.|++|||+. +|+||||||+||++++++.++|+|||++....
T Consensus 77 lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 153 (285)
T cd05630 77 LVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 153 (285)
T ss_pred EEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecC
Confidence 9999999999998875321 2357899999999987 99999999999999999999999999987543
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchh-hhccChHHHHhhcccch
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENV-LQVLDPELRQLMTSNES 872 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~ 872 (929)
.. .......||..|||||++.+..++.++||||+|++++++..+..++....... .+........ ....
T Consensus 154 ~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~-~~~~-- 223 (285)
T cd05630 154 EG-------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-VQEE-- 223 (285)
T ss_pred CC-------ccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh-hhhh--
Confidence 11 11123478999999999999999999999999988777655544443221100 0000000000 0000
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCC-----HHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIG-----IREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~ev~~ 908 (929)
.......-+.+++.+||+.||++||| ++|+++
T Consensus 224 ----~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 224 ----YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred ----cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 00011122234777999999999999 888876
No 225
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=1.5e-29 Score=287.38 Aligned_cols=175 Identities=22% Similarity=0.267 Sum_probs=141.3
Q ss_pred CCCCCceeecccCceeEEeccccC-------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYE 727 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e 727 (929)
.+|...+.||+|+||.||++...+ ..+.+.+|++++++++|||||++++++.. ....++|||
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-----~~~~~lv~e 166 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPGREIDILKTISHRAIINLIHAYRW-----KSTVCMVMP 166 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccccHHHHHHHHHhcCCCCccceeeeEee-----CCEEEEEeh
Confidence 478889999999999999875431 12356789999999999999999998853 345899999
Q ss_pred ecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCC
Q 002376 728 FLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799 (929)
Q Consensus 728 ~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~ 799 (929)
|+. ++|.+++.... .++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+....
T Consensus 167 ~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~--- 239 (392)
T PHA03207 167 KYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP--- 239 (392)
T ss_pred hcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCccc---
Confidence 995 68888875322 3467899999999998 99999999999999999999999999998653221
Q ss_pred CCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 800 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
.........||+.|+|||++.+..++.++||||+|+++|++.+...++
T Consensus 240 -~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf 287 (392)
T PHA03207 240 -DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTL 287 (392)
T ss_pred -ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 111123457999999999999999999999999999888876554443
No 226
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.95 E-value=2.2e-29 Score=271.11 Aligned_cols=225 Identities=25% Similarity=0.333 Sum_probs=161.8
Q ss_pred eeecccCceeEEecccc-----------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 667 NLIGSGSFGSVLHNERT-----------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~-----------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+.||+|+||.||+|+.. .....|.+|+++++.++||||++++++|...+ ..+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNE-----PQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCC-----CeE
Confidence 36899999999988753 12346788999999999999999999985433 479
Q ss_pred EEEEecCCCCccccccccc---------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC-----ceEE
Q 002376 724 LVYEFLSNGSLGDWIHGER---------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM-----TAKV 783 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~---------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~-----~~ki 783 (929)
+||||+++|+|.++++... .++.+++.|++|||+. +++||||||+||+++.++ .+|+
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l 152 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKI 152 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEE
Confidence 9999999999999986321 1356899999999987 899999999999999877 8999
Q ss_pred eccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChH
Q 002376 784 GDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPE 862 (929)
Q Consensus 784 ~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 862 (929)
+|||+++......... ......++..|+|||++.++.++.++||||+|++++++.. ...++..... ..
T Consensus 153 ~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~-------~~ 221 (269)
T cd05044 153 GDFGLARDIYKSDYYR----KEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN-------QE 221 (269)
T ss_pred CCcccccccccccccc----cCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH-------HH
Confidence 9999998653211100 1112245788999999999999999999999988777543 2222211111 11
Q ss_pred HHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 863 LRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 863 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
......... ........+..+.+++.+||+.+|++||+++++++.|++
T Consensus 222 ~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 222 VLQHVTAGG--RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred HHHHHhcCC--ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 111110000 001111223334458889999999999999999999874
No 227
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.95 E-value=3.1e-29 Score=280.08 Aligned_cols=176 Identities=23% Similarity=0.354 Sum_probs=141.3
Q ss_pred HhhCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCC-CC
Q 002376 658 RATGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS-KN 718 (929)
Q Consensus 658 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-~~ 718 (929)
+..++|...+.||+|+||.||+|.... ..+.+.+|++++++++||||+++++++..... ..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 456789999999999999999986541 12457789999999999999999998854321 12
Q ss_pred cceEEEEEEecCCCCcccccccc-------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGE-------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~-------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
....|+++|++ +++|.++++.. +.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~ 167 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQ 167 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCcccee
Confidence 23479999998 78898877532 23467999999999998 999999999999999999999999999986
Q ss_pred cccccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHH
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKW 846 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~ 846 (929)
... .....+||+.|+|||++.+ ..++.++||||+|++++++.....
T Consensus 168 ~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~ 214 (343)
T cd07878 168 ADD---------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKA 214 (343)
T ss_pred cCC---------CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCC
Confidence 421 1223478999999999877 468999999999988887655443
No 228
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.95 E-value=4.9e-29 Score=268.07 Aligned_cols=230 Identities=23% Similarity=0.290 Sum_probs=166.2
Q ss_pred CCCCCceeecccCceeEEeccccC---------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG---------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~---------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
.+|+..+.||+|+||.||++.... ..+.+.+|+.++++++||||+++++++... ..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR---AE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC---CC
Confidence 368888999999999999986531 123577899999999999999999987542 22
Q ss_pred ceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
...++||||+++++|.+++.... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 45799999999999999886432 2467899999999987 899999999999999999999999999986
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
+..... .........|+.+|+|||++.+..++.++||||+|++++++.....++..... .. .+......
T Consensus 156 ~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~-~~-----~~~~~~~~-- 224 (266)
T cd06651 156 LQTICM---SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA-MA-----AIFKIATQ-- 224 (266)
T ss_pred cccccc---cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch-HH-----HHHHHhcC--
Confidence 532111 11112234689999999999998899999999999887776554433322211 00 01111000
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
...+..+..+.+.+++++ +||..+|++||+|+||++
T Consensus 225 ~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 225 PTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred CCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 001111222334445455 788899999999999974
No 229
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.95 E-value=2.1e-29 Score=273.77 Aligned_cols=224 Identities=25% Similarity=0.272 Sum_probs=162.1
Q ss_pred CCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 663 FSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
|+..+.||+|+||+||+++... ..+.+.+|++++++++|+||+++.+++... ...+
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~-----~~~~ 76 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETK-----DALC 76 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecC-----CEEE
Confidence 5667899999999999987641 123467899999999999999999888543 3489
Q ss_pred EEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~ 153 (285)
T cd05632 77 LVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIP 153 (285)
T ss_pred EEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecC
Confidence 9999999999988875321 2367899999999998 99999999999999999999999999987542
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCch-hhhccChHHHHhhcccch
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPEN-VLQVLDPELRQLMTSNES 872 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~ 872 (929)
.. .......|+..|+|||++.+..++.++||||+|++++++.....++...... ..+.+....... ...
T Consensus 154 ~~-------~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~---~~~ 223 (285)
T cd05632 154 EG-------ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET---EEV 223 (285)
T ss_pred CC-------CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc---ccc
Confidence 11 1112347899999999999999999999999998877765544433322211 111111111110 001
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCC-----HHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIG-----IREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~ev~~ 908 (929)
.. ......+.+++.+|++.||++||+ ++|++.
T Consensus 224 ~~----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 224 YS----AKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred cC----ccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 11 111222334777999999999999 556654
No 230
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.95 E-value=3.3e-29 Score=271.89 Aligned_cols=225 Identities=21% Similarity=0.295 Sum_probs=160.3
Q ss_pred CCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 663 FSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
|+..+.||+|+||.||+|.... ..+.+.+|+++++.++||||+++++++... ...++||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~-----~~~~~v~ 81 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE-----NNLWILI 81 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC-----CEEEEEE
Confidence 4556789999999999987641 235688899999999999999999998543 3489999
Q ss_pred EecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 727 EFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~-- 156 (282)
T cd06643 82 EFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-- 156 (282)
T ss_pred EecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccccccc--
Confidence 9999999988765311 2357899999999998 9999999999999999999999999998754211
Q ss_pred CCCCccccceeccccccccccccC-----CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGL-----GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
........|+..|+|||++. +..++.++||||+|++++++.....++..... .+.+...... ......
T Consensus 157 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--~~~~~~~~~~-~~~~~~ 229 (282)
T cd06643 157 ----IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP--MRVLLKIAKS-EPPTLA 229 (282)
T ss_pred ----ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH--HHHHHHHhhc-CCCCCC
Confidence 11123346899999999974 44578899999999887776544333222111 0000000000 000000
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.. .....-+.+++.+||+.||++||++.++++
T Consensus 230 ~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 230 QP----SRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred Cc----cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01 111222334777999999999999999874
No 231
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.95 E-value=7.2e-29 Score=265.78 Aligned_cols=229 Identities=22% Similarity=0.308 Sum_probs=166.6
Q ss_pred CCCCCceeecccCceeEEecccc--------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT--------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~--------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
++|+..+.||+|+||.||++... ...++|.+|+.++++++|||++++++++.. ...++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~~~lv~ 79 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSE------EPIYIVT 79 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECC------CCcEEEE
Confidence 46778899999999999988654 124678999999999999999999998732 2268999
Q ss_pred EecCCCCcccccccc----------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccccc
Q 002376 727 EFLSNGSLGDWIHGE----------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796 (929)
Q Consensus 727 e~~~~gsL~~~l~~~----------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 796 (929)
||+++++|.++++.. ..++.+++.|++|||+. +|+||||||+||++++++.+||+|||.++.+....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence 999999999988642 13356899999999998 89999999999999999999999999998653211
Q ss_pred CCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhh
Q 002376 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTI 875 (929)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 875 (929)
. .......++..|+|||++.+..++.++||||+|++++++.. ...++.... ..+ ......... ..
T Consensus 157 ~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--~~~-----~~~~~~~~~--~~ 222 (260)
T cd05070 157 Y-----TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN--NRE-----VLEQVERGY--RM 222 (260)
T ss_pred c-----ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC--HHH-----HHHHHHcCC--CC
Confidence 0 01112245678999999988899999999999987776543 222221111 111 111110000 00
Q ss_pred hhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 876 QLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 876 ~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
+.+...+..+.+++.+|++.+|++|||++++.+.|++
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 223 PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0111122233447889999999999999999999875
No 232
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.95 E-value=3.2e-29 Score=278.20 Aligned_cols=175 Identities=22% Similarity=0.237 Sum_probs=142.4
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||+|+||.||+++... ..+.+.+|+.++..++||+|+++++++.+ ...
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~-----~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQD-----ENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----CCE
Confidence 478889999999999999987651 12346788999999999999999999854 345
Q ss_pred EEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.|+||||+++|+|.++++... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~ 152 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKM 152 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeec
Confidence 899999999999999986421 2356899999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCC-----CCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLG-----ERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
.... ........||++|||||++.+ +.++.++||||+|+++|++..+..++
T Consensus 153 ~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf 208 (331)
T cd05624 153 NQDG-----TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 208 (331)
T ss_pred cCCC-----ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCc
Confidence 3211 111223579999999999876 46889999999999998876655444
No 233
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=1.9e-29 Score=294.16 Aligned_cols=172 Identities=18% Similarity=0.216 Sum_probs=138.5
Q ss_pred hhCCCCCceeecccCceeEEecccc----------------------------------CcHHHHHHHHHHHHccCCccc
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERT----------------------------------GSWKSFIAECETLRNVRHRNL 704 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~----------------------------------~~~~~~~~E~~~l~~l~Hpni 704 (929)
..++|+..+.||+|+||+||++..+ ...+.+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 3568999999999999999986431 012357789999999999999
Q ss_pred cceeeecccCCCCCcceEEEEEEecCCCCccccccc-------------cccccccHHHHHHHhhhCCCCCEEecCCCCC
Q 002376 705 VKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG-------------ERKNELDITSALDYLHNDCEVPVVHSDLKPG 771 (929)
Q Consensus 705 v~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~-------------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~ 771 (929)
|++++++...+ ..|+|+|++. +++.+++.. .+.++.|++.||+|||+. +||||||||+
T Consensus 226 v~l~~~~~~~~-----~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~ 296 (501)
T PHA03210 226 LKIEEILRSEA-----NTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLE 296 (501)
T ss_pred CcEeEEEEECC-----eeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHH
Confidence 99999985433 4799999985 567665532 123567999999999998 9999999999
Q ss_pred CeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchh
Q 002376 772 NILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIV 844 (929)
Q Consensus 772 NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~ 844 (929)
|||++.++.+||+|||+++.+.... .......+||..|+|||++.+..++.++||||+|++++++...
T Consensus 297 NILl~~~~~vkL~DFGla~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~ 364 (501)
T PHA03210 297 NIFLNCDGKIVLGDFGTAMPFEKER-----EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSH 364 (501)
T ss_pred HEEECCCCCEEEEeCCCceecCccc-----ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHC
Confidence 9999999999999999998663211 1112335799999999999999999999999999988886543
No 234
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.95 E-value=2.9e-29 Score=269.59 Aligned_cols=232 Identities=21% Similarity=0.282 Sum_probs=165.9
Q ss_pred CCCCceeecccCceeEEeccccC---------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG---------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~---------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
+|+..+.||+|+||.||+|.... ..+.+.+|++++++++|+||+++++++.+. .
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~ 75 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD-----N 75 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC-----C
Confidence 46778999999999999976530 124578899999999999999999998543 4
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
..++||||+++|+|.+++.... .++.|++.|++|||+. +|+|+||||+||++++++.+||+|||+++..
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 152 (265)
T cd06631 76 TISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRL 152 (265)
T ss_pred eEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence 5899999999999999986432 2357899999999998 8999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
.................|+..|+|||++.+..++.++||||+|++++++.....++..... ..... .... .. .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-~~~~~--~~~~---~~-~ 225 (265)
T cd06631 153 AWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR-LAAMF--YIGA---HR-G 225 (265)
T ss_pred hhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh-HHHHH--Hhhh---cc-C
Confidence 3211111111122345689999999999998899999999999877776554443322211 10000 0000 00 0
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
............+.+++.+||+.+|++||++.|++.
T Consensus 226 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 226 LMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000011112222334777999999999999999874
No 235
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.95 E-value=1.2e-28 Score=263.34 Aligned_cols=224 Identities=23% Similarity=0.289 Sum_probs=166.3
Q ss_pred CCCCceeecccCceeEEecccc------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERT------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+|+..+.||+|+||.||++... ...+++.+|++++++++|||++++++++... ...+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK-----GKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccC-----CEEE
Confidence 4677899999999999998654 1245788999999999999999999998543 3589
Q ss_pred EEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
+||||+++++|.++++... .++.+++.|++|||+. +++||||||+||++++++.+|++|||+++.+.
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~ 152 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLS 152 (256)
T ss_pred EEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceecc
Confidence 9999999999999986431 2356899999999997 99999999999999999999999999998653
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
.. ........|++.|+|||+..+..++.++||||+|++++++.....++..... .+...........
T Consensus 153 ~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~----- 219 (256)
T cd08529 153 DN------TNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ--GALILKIIRGVFP----- 219 (256)
T ss_pred Cc------cchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHcCCCC-----
Confidence 21 1112234688999999999999999999999999877776554433322211 1111111111000
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
........-+.+++.+||+.+|++||+|.++++
T Consensus 220 --~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 220 --PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred --CCccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 011111122333777999999999999999976
No 236
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.95 E-value=6.4e-29 Score=275.76 Aligned_cols=175 Identities=25% Similarity=0.278 Sum_probs=141.1
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||+|+||.||+++... ..+.|.+|+.++..++||||+++++++.+ ...
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQD-----ENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEec-----CCe
Confidence 478889999999999999887642 12347789999999999999999999854 345
Q ss_pred EEEEEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.|+||||+++|+|.+++.+. +.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.+
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 152 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRL 152 (331)
T ss_pred EEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeec
Confidence 89999999999999988642 22357899999999998 9999999999999999999999999998765
Q ss_pred ccccCCCCCccccceeccccccccccccCC-----CCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLG-----ERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
.... .......+||+.|||||++.. ..++.++||||+|++++++..+..++
T Consensus 153 ~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf 208 (331)
T cd05597 153 LADG-----TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPF 208 (331)
T ss_pred CCCC-----CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCC
Confidence 3211 111223469999999999863 45789999999999888876554443
No 237
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.95 E-value=3.5e-29 Score=268.15 Aligned_cols=230 Identities=22% Similarity=0.299 Sum_probs=167.9
Q ss_pred hCCCCCceeecccCceeEEecccc--------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT--------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~--------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV 725 (929)
.++|+..++||+|+||.||+|... ...++|.+|+.++++++||||+++++++.. ...++|
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~v 78 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQ------EPIYII 78 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEcc------CCcEEE
Confidence 357888899999999999998764 234678999999999999999999998632 237999
Q ss_pred EEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 726 YEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
|||+++|+|.++++... .++.+++.||+|||+. +++||||||+||++++++.++++|||+++.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 99999999999875321 2356899999999987 9999999999999999999999999999765321
Q ss_pred cCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQT 874 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 874 (929)
.. .......++..|+|||++.+..++.++||||+|++++++.. ...++.... ++.......... .
T Consensus 156 ~~-----~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-------~~~~~~~~~~~~--~ 221 (260)
T cd05067 156 EY-----TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT-------NPEVIQNLERGY--R 221 (260)
T ss_pred Cc-----ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC-------hHHHHHHHHcCC--C
Confidence 10 11122346778999999998899999999999987776543 222221111 111111111110 0
Q ss_pred hhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 875 IQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 875 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
.......+..+.+++.+|++.+|++||+++++...|++
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 222 MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 00111112223347779999999999999999999875
No 238
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.95 E-value=5.6e-29 Score=275.22 Aligned_cols=218 Identities=24% Similarity=0.282 Sum_probs=157.1
Q ss_pred CCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccC-CccccceeeecccCCCCCcce
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~~~ 721 (929)
+|+..+.||+|+||.||+++... ..+.+..|..+++.+. |++|+++++++.+. ..
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~-----~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTV-----DR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecC-----CE
Confidence 36778999999999999987641 1234677888888886 56788888887442 34
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.|+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~ 152 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHM 152 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccC
Confidence 899999999999998876432 3467899999999998 99999999999999999999999999987532
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
.. ........||+.|||||++.+..++.++||||+|++++++.++..++..... .+.... +. ......
T Consensus 153 ~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--~~~~~~-i~---~~~~~~ 220 (323)
T cd05615 153 VD------GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE--DELFQS-IM---EHNVSY 220 (323)
T ss_pred CC------CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHH-HH---hCCCCC
Confidence 11 1112335699999999999999999999999999887776554444322211 111111 11 101000
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGI 903 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 903 (929)
. ..+...+.+++.+|++.+|++|++.
T Consensus 221 p----~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 221 P----KSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred C----ccCCHHHHHHHHHHcccCHhhCCCC
Confidence 0 1112222337779999999999985
No 239
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.95 E-value=1e-29 Score=272.17 Aligned_cols=228 Identities=27% Similarity=0.407 Sum_probs=163.2
Q ss_pred CCCceeecccCceeEEeccccCc------------------HHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 663 FSHENLIGSGSFGSVLHNERTGS------------------WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~~~------------------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
|+..+.||+|+||.||+++.... .....+|+.++++++||||+++++++.. ....++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-----DNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----SSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----cccccc
Confidence 56678999999999999887622 1233459999999999999999999865 344899
Q ss_pred EEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 796 (929)
||||+++++|.+++.... .++.|+++||+|||+. +|+||||||+||++++++.++|+|||.+.....
T Consensus 76 v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~-- 150 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSE-- 150 (260)
T ss_dssp EEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTS--
T ss_pred cccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc--
Confidence 999999999999887222 3367899999999998 999999999999999999999999999875411
Q ss_pred CCCCCccccceeccccccccccccC-CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhcccchhh
Q 002376 797 DNQSSISSTHVFMGSIGYVPPEYGL-GERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMTSNESQT 874 (929)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~ 874 (929)
.........++..|+|||++. +..++.++||||+|++++++.....++..... ...+.+...............
T Consensus 151 ----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (260)
T PF00069_consen 151 ----NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQS 226 (260)
T ss_dssp ----TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSH
T ss_pred ----cccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccccccc
Confidence 112233457899999999998 78899999999999776665443333322211 111111111111111010000
Q ss_pred hhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 875 IQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 875 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
... ...+. +++.+|++.||++||++.++++
T Consensus 227 ~~~---~~~l~-~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 227 REK---SEELR-DLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp TTS---HHHHH-HHHHHHSSSSGGGSTTHHHHHT
T ss_pred chh---HHHHH-HHHHHHccCChhHCcCHHHHhc
Confidence 000 12233 3777999999999999999875
No 240
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.95 E-value=4.4e-29 Score=297.58 Aligned_cols=233 Identities=23% Similarity=0.270 Sum_probs=167.1
Q ss_pred HHhhCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCC
Q 002376 657 RRATGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 657 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 718 (929)
....++|.+.+.||+|+||.||+++... ....|..|+.++++++|||||+++++|... .
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de---~ 85 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK---A 85 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec---C
Confidence 3445689999999999999999987641 235688999999999999999999988653 2
Q ss_pred cceEEEEEEecCCCCcccccccc------------ccccccHHHHHHHhhhCCC----CCEEecCCCCCCeeecC-----
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGE------------RKNELDITSALDYLHNDCE----VPVVHSDLKPGNILLDE----- 777 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~------------~~~~~~ia~aL~yLH~~~~----~~iiHrDlk~~NILl~~----- 777 (929)
...+|+||||+++|+|.+++... ..++.||+.||+|||+... .+||||||||+|||++.
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~l 165 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHI 165 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccc
Confidence 34589999999999999988632 1336799999999998521 36999999999999964
Q ss_pred ------------CCceEEeccccccccccccCCCCCccccceeccccccccccccCC--CCCCCCCCCCCCcCCCCCcch
Q 002376 778 ------------EMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG--ERPSTAGDVPTSESFAGEFNI 843 (929)
Q Consensus 778 ------------~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~s~g~~~~~~~~ 843 (929)
.+.+||+|||+++.+... .......||+.|||||++.+ ..++.++||||+||++|++.+
T Consensus 166 g~i~~~~~n~ng~~iVKLsDFGlAr~l~~~-------s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLT 238 (1021)
T PTZ00266 166 GKITAQANNLNGRPIAKIGDFGLSKNIGIE-------SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCS 238 (1021)
T ss_pred ccccccccccCCCCceEEccCCcccccccc-------ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHH
Confidence 335899999999865321 11233579999999999864 458999999999988888765
Q ss_pred hHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 844 VKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
...++..... ..+++ ..+...... .... ...-+.+++.+||+.+|++||++.|++.
T Consensus 239 Gk~PF~~~~~-~~qli-----~~lk~~p~l--pi~~-~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 239 GKTPFHKANN-FSQLI-----SELKRGPDL--PIKG-KSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCCCCCcCCc-HHHHH-----HHHhcCCCC--CcCC-CCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 5544432221 11111 111101100 0000 1112233777999999999999999984
No 241
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.95 E-value=1.5e-29 Score=278.45 Aligned_cols=173 Identities=26% Similarity=0.339 Sum_probs=138.0
Q ss_pred CCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
++|...+.||+|+||.||+|+... ....+.+|++++++++||||+++++++... ...+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 80 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTD-----KSLT 80 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeC-----CeEE
Confidence 578889999999999999986541 123677899999999999999999998543 3489
Q ss_pred EEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
+||||+++ +|.+++.... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 156 (309)
T cd07872 81 LVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSV 156 (309)
T ss_pred EEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCC
Confidence 99999974 8887765322 2356899999999998 999999999999999999999999999975421
Q ss_pred ccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
.. .......+|+.|+|||++.+ ..++.++||||+|++++++.++..++
T Consensus 157 ~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf 205 (309)
T cd07872 157 PT------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLF 205 (309)
T ss_pred Cc------cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 11 11123467899999998865 45899999999998888776554433
No 242
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.95 E-value=5.3e-29 Score=266.25 Aligned_cols=226 Identities=25% Similarity=0.313 Sum_probs=163.3
Q ss_pred eeecccCceeEEeccccC--------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 667 NLIGSGSFGSVLHNERTG--------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~--------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
+.||+|+||.||+|.+.. ..+.|.+|++++++++||||+++++++.. ...++||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT------HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC------CeEEEEE
Confidence 468999999999986531 23468899999999999999999999854 3479999
Q ss_pred EecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccccc
Q 002376 727 EFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 796 (929)
||+++|+|.+++.... .++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.+....
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~ 151 (257)
T cd05040 75 ELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNE 151 (257)
T ss_pred EecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccc
Confidence 9999999999886532 1246899999999998 99999999999999999999999999998764321
Q ss_pred CCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhh
Q 002376 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTI 875 (929)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 875 (929)
.. ........++..|+|||++.+..++.++||||+|++++++.. +..++..... .+.... .... .. ..
T Consensus 152 ~~---~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~-~~~~---~~--~~ 220 (257)
T cd05040 152 DH---YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG--SQILKK-IDKE---GE--RL 220 (257)
T ss_pred cc---eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH--HHHHHH-HHhc---CC--cC
Confidence 11 111123457889999999998899999999999988777543 2222211111 111000 0000 00 00
Q ss_pred hhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 876 QLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 876 ~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
...+..+.-+.+++.+|++.+|++||+++|+++.|.+
T Consensus 221 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 257 (257)
T cd05040 221 ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLPE 257 (257)
T ss_pred CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhcC
Confidence 0011122233347889999999999999999998753
No 243
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.95 E-value=2.4e-28 Score=263.33 Aligned_cols=233 Identities=21% Similarity=0.259 Sum_probs=168.0
Q ss_pred CCCCCceeecccCceeEEecccc--------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT--------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~--------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
++|...+.||+|+||.||+|... ...+.|.+|+.++++++||||+++++++...
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------ 79 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN------ 79 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC------
Confidence 45777899999999999998642 1134688999999999999999999988532
Q ss_pred eEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..++||||+++|+|.+++.... .++.+++.|++|||+. +++||||||+||+++.++.+|++|||+++.
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~ 156 (270)
T cd05056 80 PVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRY 156 (270)
T ss_pred CcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeee
Confidence 2689999999999999986422 2357899999999997 999999999999999999999999999986
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
...... .......++..|+|||++.+..++.++||||+|++++++.. ...++..... .+ ........
T Consensus 157 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--~~-----~~~~~~~~ 224 (270)
T cd05056 157 LEDESY-----YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN--ND-----VIGRIENG 224 (270)
T ss_pred cccccc-----eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH--HH-----HHHHHHcC
Confidence 532210 11112235678999999988889999999999987776432 2222211111 01 11000000
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
. +...+...+..+.+++.+|+..+|++|||+.|+++.|+++..+
T Consensus 225 ~--~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 225 E--RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred C--cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0 0001111122333477799999999999999999999997653
No 244
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.95 E-value=6.4e-29 Score=266.17 Aligned_cols=230 Identities=21% Similarity=0.316 Sum_probs=167.5
Q ss_pred hCCCCCceeecccCceeEEeccccC--------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG--------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~--------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV 725 (929)
.++|+..+.||+|+||.||++.... ..+.|.+|++++++++|+||+++++++.. ...++|
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~~~v 78 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EPIYII 78 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC------CCeEEE
Confidence 3578889999999999999886531 23578899999999999999999999854 237999
Q ss_pred EEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 726 YEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
|||+++|+|.+++.... .++.+++.|++|||+. +++||||||+||+++.++.+||+|||.++.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 79 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred EEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 99999999999986421 2356899999999987 9999999999999999999999999999765321
Q ss_pred cCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQT 874 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 874 (929)
.. .......++..|+|||++.+..++.++||||+|++++++.+ ...++..... ..+.........
T Consensus 156 ~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~-------~~~~~~~~~~~~-- 221 (260)
T cd05073 156 EY-----TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-------PEVIRALERGYR-- 221 (260)
T ss_pred Cc-----ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH-------HHHHHHHhCCCC--
Confidence 10 11112345678999999998889999999999987776543 2222221111 111111110000
Q ss_pred hhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 875 IQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 875 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
.+........+.+++.+|++.+|++||++.++.+.|++
T Consensus 222 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 222 MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 00001112223347779999999999999999999975
No 245
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.95 E-value=4.3e-29 Score=269.63 Aligned_cols=235 Identities=24% Similarity=0.292 Sum_probs=170.0
Q ss_pred HhhCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHcc-CCccccceeeecccCCC-CCcc
Q 002376 658 RATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDS-KNME 720 (929)
Q Consensus 658 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~-~~~~ 720 (929)
.++++|+..+.||+|+||.||+|.... ..++|.+|+.+++++ +||||+++++++..... ....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 467899999999999999999988752 235788999999999 79999999999876443 2345
Q ss_pred eEEEEEEecCCCCccccccccc------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGl 788 (929)
..++||||+++++|.++++..+ .++.|++.||+|||+. +++||||+|+||++++++.+|++|||+
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCcc
Confidence 6899999999999998875322 2356899999999998 999999999999999999999999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCC-----CCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHH
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG-----ERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPEL 863 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l 863 (929)
+...... ........|+..|+|||++.. ..++.++||||+|++++++.....++..... . ..+
T Consensus 160 ~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~-----~~~ 227 (275)
T cd06608 160 SAQLDST------LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP-M-----RAL 227 (275)
T ss_pred ceecccc------hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch-H-----HHH
Confidence 8764321 111223468999999998754 3478899999999887776554444322111 0 011
Q ss_pred HHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 864 RQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..... ...............+++++.+|++.||++|||+.|+++
T Consensus 228 ~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 228 FKIPR-NPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred HHhhc-cCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11100 000001111112223334777999999999999999975
No 246
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.95 E-value=2.6e-29 Score=272.96 Aligned_cols=231 Identities=21% Similarity=0.292 Sum_probs=167.3
Q ss_pred CCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
++|+..+.||+|+||+||++.... ..+.+.+|+++++.++||||+++++++... ...+
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 79 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNE-----NNIC 79 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecC-----CEEE
Confidence 467778899999999999977541 135788999999999999999999998643 4589
Q ss_pred EEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
+||||+++|+|.++++... .++.+++.|+.|||+.+ +++||||||+||++++++.++|+|||+++.....
T Consensus 80 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 80 MCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred EEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 9999999999998876432 33678999999999742 7999999999999999999999999998754211
Q ss_pred cCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCch------hhhccChHHHHhhcc
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPEN------VLQVLDPELRQLMTS 869 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~~~ 869 (929)
......|+..|+|||++.+..++.++||||+|++++++.....++...... ..++.+ .......
T Consensus 158 --------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~- 227 (284)
T cd06620 158 --------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILD-LLQQIVQ- 227 (284)
T ss_pred --------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHH-HHHHHhh-
Confidence 112347899999999998889999999999998877765444443321110 000000 1111110
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
.........+ ....+.+++.+|++.||++||++.|+++.
T Consensus 228 ~~~~~~~~~~-~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 228 EPPPRLPSSD-FPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred ccCCCCCchh-cCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 1111111111 22223348889999999999999999976
No 247
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.95 E-value=1.8e-29 Score=252.62 Aligned_cols=171 Identities=29% Similarity=0.387 Sum_probs=137.6
Q ss_pred CCCCCceeecccCceeEEeccccCc----------------------HHHHHHHHHHHHccCCccccceeeecccCCCCC
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTGS----------------------WKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~~----------------------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 718 (929)
..|+....||+|.||.||+|..+.+ .....+|+..++.++|||||.+..++..-
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~---- 99 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH---- 99 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc----
Confidence 4678889999999999999965411 12456899999999999999999998753
Q ss_pred cceEEEEEEecCCCCccccccccc-------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC----Cce
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER-------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE----MTA 781 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~-------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~----~~~ 781 (929)
...+++++||++. +|.+.++-.+ .+..||+.|+.|||++ -|+|||+||+|||+..+ |.+
T Consensus 100 d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~V 175 (438)
T KOG0666|consen 100 DKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRV 175 (438)
T ss_pred CceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCee
Confidence 3458999999986 8888876322 2246899999999998 79999999999999877 899
Q ss_pred EEeccccccccccccCCCCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCcc
Q 002376 782 KVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEFN 842 (929)
Q Consensus 782 ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~~ 842 (929)
||+|||+||.+..... .......++-|++|+|||++.|.+ |+.+.|||+.||+..|+.
T Consensus 176 KIaDlGlaR~~~~plk---pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElL 234 (438)
T KOG0666|consen 176 KIADLGLARLFNNPLK---PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELL 234 (438)
T ss_pred EeecccHHHHhhcccc---ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHH
Confidence 9999999998753221 122334567899999999999876 899999999998765543
No 248
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.95 E-value=2.6e-28 Score=261.86 Aligned_cols=230 Identities=24% Similarity=0.297 Sum_probs=166.8
Q ss_pred CCCCCceeecccCceeEEeccccC---------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG---------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~---------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
++|+..+.||+|+||.||++.... ..+.+.+|++++++++||||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD----- 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC-----
Confidence 578889999999999999886431 124678899999999999999999998543
Q ss_pred ceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
...++||||+++++|.+++.... .++.+++.|++|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~ 153 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 153 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccccee
Confidence 35899999999999999886432 3467899999999998 999999999999999999999999999976
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
...... .........|+..|+|||++.+..++.++||||+|++++++.....++..... .... ........
T Consensus 154 ~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~~~-----~~~~~~~~ 224 (263)
T cd06625 154 LQTICS---SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA-MAAI-----FKIATQPT 224 (263)
T ss_pred cccccc---ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch-HHHH-----HHHhccCC
Confidence 532111 01111234678899999999999999999999999887776554333221111 1000 00000000
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
....++.....+.+++.+||+.+|++|||++|+++.
T Consensus 225 --~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 225 --NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred --CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 001111122223347779999999999999999763
No 249
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.95 E-value=5.9e-29 Score=266.13 Aligned_cols=216 Identities=22% Similarity=0.296 Sum_probs=157.0
Q ss_pred eeecccCceeEEeccccC-------------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 667 NLIGSGSFGSVLHNERTG-------------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~-------------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
+.||+|+||.||+|.... ..+.|.+|+.++++++||||+++++++.. . .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~-----~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-D-----E 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-C-----C
Confidence 468999999999877631 13568899999999999999999999865 2 2
Q ss_pred EEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC-------ceEEec
Q 002376 722 LALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM-------TAKVGD 785 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~-------~~ki~D 785 (929)
.++||||+++|+|.++++... .++.|++.||+|||+. +|+||||||+||+++.++ .+|++|
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCC
Confidence 699999999999999886432 2356999999999997 999999999999999888 799999
Q ss_pred cccccccccccCCCCCccccceeccccccccccccCCC--CCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHH
Q 002376 786 FGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE--RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPEL 863 (929)
Q Consensus 786 fGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l 863 (929)
||+++.... .....++..|+|||++.+. .++.++||||+|++++++... +..|..... ....
T Consensus 152 fg~a~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~----~~~p~~~~~--~~~~ 215 (259)
T cd05037 152 PGIPITVLS----------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSN----GEEPLSTLS--SSEK 215 (259)
T ss_pred CCccccccc----------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhC----CCCCcccCC--chhH
Confidence 999986521 1223567789999999877 789999999999877764331 222210000 0000
Q ss_pred HHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 002376 864 RQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLK 911 (929)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 911 (929)
.............. ...+. +++.+||+.+|++||++.|+++.|+
T Consensus 216 ~~~~~~~~~~~~~~---~~~~~-~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 216 ERFYQDQHRLPMPD---CAELA-NLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred HHHHhcCCCCCCCC---chHHH-HHHHHHhccChhhCCCHHHHHHhcC
Confidence 00000000000000 12233 3778999999999999999998873
No 250
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.95 E-value=3.8e-29 Score=269.06 Aligned_cols=229 Identities=21% Similarity=0.271 Sum_probs=162.5
Q ss_pred CCCCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
++|+..+.||+|+||.||+|+... ....+.+|+.+++.++||||+++++++... ...++
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~-----~~~~l 83 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR-----DKLWI 83 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC-----CEEEE
Confidence 467777899999999999987541 224577899999999999999999998543 35899
Q ss_pred EEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 796 (929)
||||+++|+|.++++... .++.|++.|++|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~- 159 (267)
T cd06645 84 CMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITAT- 159 (267)
T ss_pred EEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCc-
Confidence 999999999999876332 3367899999999998 9999999999999999999999999998765321
Q ss_pred CCCCCccccceeccccccccccccC---CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 797 DNQSSISSTHVFMGSIGYVPPEYGL---GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
........|+..|+|||++. ...++.++||||+|++++++.....++..... ...+...............
T Consensus 160 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~ 233 (267)
T cd06645 160 -----IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHP-MRALFLMTKSNFQPPKLKD 233 (267)
T ss_pred -----ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccc-hhhHHhhhccCCCCCcccc
Confidence 11123347899999999874 45689999999999887775443332211111 0000000000000000000
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
....++ .+.+++.+|++.+|++||+++++++
T Consensus 234 ~~~~~~----~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 234 KMKWSN----SFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred cCCCCH----HHHHHHHHHccCCchhCcCHHHHhc
Confidence 001112 2334777999999999999999875
No 251
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.95 E-value=3e-29 Score=274.19 Aligned_cols=227 Identities=22% Similarity=0.239 Sum_probs=168.0
Q ss_pred CCCCCceeecccCceeEEecccc----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
++|+..+.||+|+||.||++... ...+.+.+|+.+++.++||||+++++++... ...++
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~l 93 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-----DELWV 93 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC-----CEEEE
Confidence 57888999999999999998753 1245678899999999999999999998543 35899
Q ss_pred EEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 725 VYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
||||+++++|.+++.+.. .++.+++.||+|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 94 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~- 169 (297)
T cd06656 94 VMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ- 169 (297)
T ss_pred eecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCc-
Confidence 999999999999886422 3356899999999998 99999999999999999999999999987653221
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQL 877 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 877 (929)
.......|++.|+|||.+.+..++.++||||+|++++++.....++..... ....... ... .......
T Consensus 170 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~-~~~~~~~-~~~-----~~~~~~~ 237 (297)
T cd06656 170 -----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP-LRALYLI-ATN-----GTPELQN 237 (297)
T ss_pred -----cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc-chheeee-ccC-----CCCCCCC
Confidence 111234688999999999998899999999999887776554433321111 0000000 000 0000011
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 878 HDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 878 ~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
+..+...+++++.+||+.+|++||+++|+++
T Consensus 238 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 238 PERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1223333445778999999999999999987
No 252
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.95 E-value=3.3e-29 Score=261.07 Aligned_cols=228 Identities=25% Similarity=0.278 Sum_probs=170.8
Q ss_pred CCCCceeecccCceeEEeccccCc-------------------HHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTGS-------------------WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~~-------------------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
+|+..+.||.|.-|+||.++..+. ..+...|.+||+.++||.++.+|+.+. ...+.
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fe-----t~~~~ 152 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFE-----TDKYS 152 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheee-----cccee
Confidence 344568899999999999887632 235567999999999999999999984 45568
Q ss_pred EEEEEecCCCCcccccccc----------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGE----------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~----------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
|+|||||+||+|....+++ |.++.+|..||+|||-. |||.|||||+||||.++|++.++||-++...
T Consensus 153 cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 153 CLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred EEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccC
Confidence 9999999999999887643 34467899999999998 9999999999999999999999999988643
Q ss_pred cc-----------------------------c---cCC------------------CCCccccceeccccccccccccCC
Q 002376 793 LE-----------------------------R---VDN------------------QSSISSTHVFMGSIGYVPPEYGLG 822 (929)
Q Consensus 793 ~~-----------------------------~---~~~------------------~~~~~~~~~~~gt~~y~aPE~~~~ 822 (929)
.. . ... .........++||-.|+|||+++|
T Consensus 230 ~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G 309 (459)
T KOG0610|consen 230 PVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG 309 (459)
T ss_pred CCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec
Confidence 10 0 000 000122356789999999999999
Q ss_pred CCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCC
Q 002376 823 ERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGR 900 (929)
Q Consensus 823 ~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~R 900 (929)
...+.++|=|++|+++||+..+.-++..... .+..++...+.- +... .++..++||+++.+..||.+|
T Consensus 310 ~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~F--p~~~--------~vs~~akDLIr~LLvKdP~kR 379 (459)
T KOG0610|consen 310 EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKF--PEEP--------EVSSAAKDLIRKLLVKDPSKR 379 (459)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcC--CCCC--------cchhHHHHHHHHHhccChhhh
Confidence 9999999999999888887655555443322 334444333221 1111 234455668889999999999
Q ss_pred CC----HHHHH
Q 002376 901 IG----IREAL 907 (929)
Q Consensus 901 Ps----~~ev~ 907 (929)
-- ++||-
T Consensus 380 lg~~rGA~eIK 390 (459)
T KOG0610|consen 380 LGSKRGAAEIK 390 (459)
T ss_pred hccccchHHhh
Confidence 87 66664
No 253
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.95 E-value=1.2e-28 Score=273.79 Aligned_cols=212 Identities=25% Similarity=0.250 Sum_probs=149.1
Q ss_pred ecccCceeEEeccccCc-------------------HHHHHHHHHHHHcc---CCccccceeeecccCCCCCcceEEEEE
Q 002376 669 IGSGSFGSVLHNERTGS-------------------WKSFIAECETLRNV---RHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 669 iG~G~~g~Vy~~~~~~~-------------------~~~~~~E~~~l~~l---~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
||+|+||+||+|+.... ...+..|..++.+. +||||+++++++... ...|+||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~-----~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTD-----SDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecC-----CeEEEEE
Confidence 69999999999876411 12334566666655 699999999988543 3489999
Q ss_pred EecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 727 EFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
||+++|+|.+++.... .++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 76 e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~--- 149 (330)
T cd05586 76 DYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTD--- 149 (330)
T ss_pred cCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC---
Confidence 9999999998876432 2367899999999998 9999999999999999999999999998753211
Q ss_pred CCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQL 877 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 877 (929)
.......+||+.|||||++.+.. ++.++||||+|+++|++..+..++.... ..+.. ............
T Consensus 150 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~--~~~~~----~~i~~~~~~~~~-- 218 (330)
T cd05586 150 ---NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED--TQQMY----RNIAFGKVRFPK-- 218 (330)
T ss_pred ---CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC--HHHHH----HHHHcCCCCCCC--
Confidence 11123457999999999987654 8999999999999998766554432211 11111 100000000000
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCH
Q 002376 878 HDCLITIIGSVGLSCTTESPGGRIGI 903 (929)
Q Consensus 878 ~~~~~~~~~~l~~~Cl~~dP~~RPs~ 903 (929)
..+...+++++.+|++.||++||++
T Consensus 219 -~~~~~~~~~li~~~L~~~P~~R~~~ 243 (330)
T cd05586 219 -NVLSDEGRQFVKGLLNRNPQHRLGA 243 (330)
T ss_pred -ccCCHHHHHHHHHHcCCCHHHCCCC
Confidence 0112222346779999999999954
No 254
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.95 E-value=1.2e-28 Score=268.81 Aligned_cols=227 Identities=20% Similarity=0.274 Sum_probs=161.7
Q ss_pred CCCCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
+.|+..+.||+|+||.||+|+... ..+.+.+|+++++.++||||+++++++... ...++
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 86 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWD-----GKLWI 86 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC-----CeEEE
Confidence 567888999999999999987642 235688899999999999999999988543 35899
Q ss_pred EEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
||||+++++|..++.+. .....|++.|++|||+. +++|||+||+||+++.++.+||+|||+++.....
T Consensus 87 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 163 (292)
T cd06644 87 MIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT 163 (292)
T ss_pred EEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecccc
Confidence 99999999998776432 12367899999999998 9999999999999999999999999998753211
Q ss_pred cCCCCCccccceeccccccccccccC-----CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhccc
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGL-----GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
........|++.|+|||++. ...++.++||||+|+++|++.....++..... .+ .........
T Consensus 164 ------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~~----~~~~~~~~~ 231 (292)
T cd06644 164 ------LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP--MR----VLLKIAKSE 231 (292)
T ss_pred ------ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH--HH----HHHHHhcCC
Confidence 11123346889999999985 34478899999999887775544333221111 00 011111000
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
............++. +++.+||+.+|++||++.|+++
T Consensus 232 ~~~~~~~~~~~~~~~-~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 232 PPTLSQPSKWSMEFR-DFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred CccCCCCcccCHHHH-HHHHHHhcCCcccCcCHHHHhc
Confidence 000000001111223 3777999999999999999975
No 255
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.95 E-value=5.3e-29 Score=266.06 Aligned_cols=230 Identities=26% Similarity=0.351 Sum_probs=164.3
Q ss_pred CCCCCceeecccCceeEEecccc--------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT--------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~--------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
.+|+..+.||+|+||.||++.+. ....+|.+|++++++++|||++++++++... ...++||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~~v~ 78 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTER-----SPICLVF 78 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccC-----CceEEEE
Confidence 35677899999999999998653 1245799999999999999999999998543 3479999
Q ss_pred EecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 727 EFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
||+++|+|.++++... ..+.+++.|++|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~- 154 (256)
T cd05112 79 EFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ- 154 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCc-
Confidence 9999999999886322 2356889999999998 89999999999999999999999999987653211
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQL 877 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 877 (929)
........++.+|+|||++.++.++.++||||+|++++++.. .+..|... .....+.......... ..
T Consensus 155 ----~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~----~g~~p~~~--~~~~~~~~~~~~~~~~--~~ 222 (256)
T cd05112 155 ----YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFS----EGKTPYEN--RSNSEVVETINAGFRL--YK 222 (256)
T ss_pred ----ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHc----CCCCCCCc--CCHHHHHHHHhCCCCC--CC
Confidence 011112245678999999998899999999999987766432 12222100 0000111111100000 00
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 002376 878 HDCLITIIGSVGLSCTTESPGGRIGIREALRRLK 911 (929)
Q Consensus 878 ~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 911 (929)
+......+.+++.+||+.+|++||+|.|++++|.
T Consensus 223 ~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 223 PRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 0011123334888999999999999999998873
No 256
>PTZ00284 protein kinase; Provisional
Probab=99.95 E-value=3.7e-29 Score=290.68 Aligned_cols=179 Identities=23% Similarity=0.310 Sum_probs=139.6
Q ss_pred HHHHHhhCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHccCCc------cccceeeecc
Q 002376 654 DELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNVRHR------NLVKLITSCS 712 (929)
Q Consensus 654 ~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l~Hp------niv~l~~~~~ 712 (929)
+++...+++|+..++||+|+||+||+|++.. ..+.+..|++++++++|. +++++++++.
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 3445567899999999999999999987641 123456788888877654 5888888875
Q ss_pred cCCCCCcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC-----
Q 002376 713 SLDSKNMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM----- 779 (929)
Q Consensus 713 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~----- 779 (929)
.. ..+.++|||++ +++|.+++.+.. .++.||+.||+|||+. .+||||||||+|||++.++
T Consensus 202 ~~----~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~ 274 (467)
T PTZ00284 202 NE----TGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDP 274 (467)
T ss_pred cC----CceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCccccc
Confidence 32 34589999998 678888876432 3467999999999973 2899999999999998765
Q ss_pred -----------ceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 780 -----------TAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 780 -----------~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
.+||+|||.+.... ......+||+.|||||++.+..++.++||||+||++|++..+..++
T Consensus 275 ~~~~~~~~~~~~vkl~DfG~~~~~~---------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf 345 (467)
T PTZ00284 275 VTNRALPPDPCRVRICDLGGCCDER---------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLY 345 (467)
T ss_pred ccccccCCCCceEEECCCCccccCc---------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 49999999876321 1123468999999999999999999999999999988876655544
No 257
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.95 E-value=3.1e-29 Score=291.22 Aligned_cols=239 Identities=24% Similarity=0.278 Sum_probs=164.6
Q ss_pred HhhCCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCC---
Q 002376 658 RATGNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSK--- 717 (929)
Q Consensus 658 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~--- 717 (929)
+...+|+..++||+||||.|||++.+- ......+|++.+++++|||||+++..+.+...+
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 345577778899999999999988761 223567899999999999999988776643110
Q ss_pred --------------------------------------------------------------------------------
Q 002376 718 -------------------------------------------------------------------------------- 717 (929)
Q Consensus 718 -------------------------------------------------------------------------------- 717 (929)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred -------------------------------CcceEEEEEEecCCCCcccccccccc---------ccccHHHHHHHhhh
Q 002376 718 -------------------------------NMEFLALVYEFLSNGSLGDWIHGERK---------NELDITSALDYLHN 757 (929)
Q Consensus 718 -------------------------------~~~~~~lV~e~~~~gsL~~~l~~~~~---------~~~~ia~aL~yLH~ 757 (929)
....+|+-||||+...++++++.... ...+|+.||+|+|+
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHh
Confidence 00236788899988778777764332 25689999999999
Q ss_pred CCCCCEEecCCCCCCeeecCCCceEEecccccccccc---c---------cCCCCCccccceeccccccccccccCCCC-
Q 002376 758 DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE---R---------VDNQSSISSTHVFMGSIGYVPPEYGLGER- 824 (929)
Q Consensus 758 ~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~---~---------~~~~~~~~~~~~~~gt~~y~aPE~~~~~~- 824 (929)
. +||||||||.||++|++..+||+|||+|..... . ..........+..+||.-|+|||++.+..
T Consensus 716 ~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~ 792 (1351)
T KOG1035|consen 716 Q---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS 792 (1351)
T ss_pred C---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc
Confidence 8 899999999999999999999999999987320 0 00011122346679999999999998765
Q ss_pred --CCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHH-HhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCC
Q 002376 825 --PSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELR-QLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRI 901 (929)
Q Consensus 825 --~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP 901 (929)
|+.|+|+||+|++.+|+... +.... ++.. ++ ..++ ..++....... +.+..-.+ ++.++++.||++||
T Consensus 793 ~~Yn~KiDmYSLGIVlFEM~yP-F~TsM--ERa~-iL-~~LR~g~iP~~~~f~~---~~~~~e~s-lI~~Ll~hdP~kRP 863 (1351)
T KOG1035|consen 793 NKYNSKIDMYSLGIVLFEMLYP-FGTSM--ERAS-IL-TNLRKGSIPEPADFFD---PEHPEEAS-LIRWLLSHDPSKRP 863 (1351)
T ss_pred ccccchhhhHHHHHHHHHHhcc-CCchH--HHHH-HH-HhcccCCCCCCccccc---ccchHHHH-HHHHHhcCCCccCC
Confidence 99999999999887775322 11111 1110 00 1111 11111100000 11222223 77799999999999
Q ss_pred CHHHHHH
Q 002376 902 GIREALR 908 (929)
Q Consensus 902 s~~ev~~ 908 (929)
||.|++.
T Consensus 864 tA~eLL~ 870 (1351)
T KOG1035|consen 864 TATELLN 870 (1351)
T ss_pred CHHHHhh
Confidence 9999874
No 258
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.95 E-value=1.6e-28 Score=272.87 Aligned_cols=175 Identities=24% Similarity=0.259 Sum_probs=140.7
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..++||+|+||.||+++... ..+.|.+|+.++..++||+|+++++++.+ ...
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQD-----ENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEec-----CCE
Confidence 478889999999999999987642 12247789999999999999999998854 335
Q ss_pred EEEEEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.|+||||+++|+|.+++++. +.++.|++.|++|||+. +|+||||||+|||++.++.+||+|||+++.+
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~ 152 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKL 152 (332)
T ss_pred EEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheec
Confidence 89999999999999998642 12356899999999998 9999999999999999999999999998754
Q ss_pred ccccCCCCCccccceeccccccccccccC-----CCCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGL-----GERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
.... .......+||+.|||||++. ...++.++||||+|++++++..+..++
T Consensus 153 ~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf 208 (332)
T cd05623 153 MEDG-----TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPF 208 (332)
T ss_pred ccCC-----cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCC
Confidence 2211 11122357999999999986 346899999999998887765554443
No 259
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.95 E-value=1e-28 Score=264.35 Aligned_cols=224 Identities=24% Similarity=0.364 Sum_probs=164.6
Q ss_pred eeecccCceeEEeccccCc--------------------HHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 667 NLIGSGSFGSVLHNERTGS--------------------WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~~--------------------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
+.||+|+||.||+|..... .+.+.+|++.++.++|+|++++++++.. ....++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE-----EEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecC-----CCceEEEE
Confidence 4699999999999876421 4678899999999999999999999865 33489999
Q ss_pred EecCCCCcccccccc---------c--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 727 EFLSNGSLGDWIHGE---------R--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 727 e~~~~gsL~~~l~~~---------~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
||+++|+|.+++... . .++.+++.|++|||+. +++||||||+||++++++.+|++|||.+
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~ 152 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLS 152 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccc
Confidence 999999999998754 1 2356899999999998 9999999999999999999999999999
Q ss_pred cccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchh-HHhhhcCCchhhhccChHHHHhhc
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIV-KWVESNLPENVLQVLDPELRQLMT 868 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~ 868 (929)
+....... ........+++.|+|||.+.+..++.++||||+|++++++... ..++..... ..+.....
T Consensus 153 ~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~~~~~~~ 221 (262)
T cd00192 153 RDVYDDDY----YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN-------EEVLEYLR 221 (262)
T ss_pred cccccccc----cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH-------HHHHHHHH
Confidence 87643211 1112334678899999999988999999999999877765331 222221111 11111111
Q ss_pred ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 002376 869 SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLK 911 (929)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 911 (929)
... ....+...+..+.+++.+||+.+|++||++.|+++.|+
T Consensus 222 ~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 222 KGY--RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred cCC--CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 000 00111111222334777999999999999999998874
No 260
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.95 E-value=5.6e-29 Score=271.85 Aligned_cols=227 Identities=22% Similarity=0.259 Sum_probs=166.2
Q ss_pred CCCCCceeecccCceeEEecccc----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
.+|+..+.||.|+||.||+|... ...+.+.+|+.+++.++|||++++++++... ...++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~l 93 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVG-----DELFV 93 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecC-----ceEEE
Confidence 46888899999999999988643 2345788999999999999999999998543 35899
Q ss_pred EEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 725 VYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
||||+++|+|.+++.... .+..+++.|++|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 94 v~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 94 VMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred EEEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 999999999999876432 2356899999999998 999999999999999999999999999886532211
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQL 877 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 877 (929)
......|+..|+|||.+.+..++.++||||+|++++++.....++..... ..+ ....... .......
T Consensus 171 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~-~~~-----~~~~~~~-~~~~~~~ 237 (296)
T cd06655 171 ------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP-LRA-----LYLIATN-GTPELQN 237 (296)
T ss_pred ------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHH-----HHHHHhc-CCcccCC
Confidence 11234688999999999998899999999999887776544333221111 000 0000000 0000001
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 878 HDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 878 ~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
+..+...+.+++.+||..||++||++.+++.
T Consensus 238 ~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 238 PEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred cccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 1112223344778999999999999999974
No 261
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.95 E-value=8.5e-29 Score=246.78 Aligned_cols=235 Identities=21% Similarity=0.212 Sum_probs=176.0
Q ss_pred hCCCCCc-eeecccCceeEEeccccCcHHHH-----------HHHHHHHHcc-CCccccceeeecccCCCCCcceEEEEE
Q 002376 660 TGNFSHE-NLIGSGSFGSVLHNERTGSWKSF-----------IAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 660 ~~~~~~~-~~iG~G~~g~Vy~~~~~~~~~~~-----------~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
|++|+.. ++||-|-.|+|..+..+.+.+.| .+|++.--.. .|||||.++++|...- .+...+.+||
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~-~~rkcLLiVm 138 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKARREVELHWMASGHPHIVSIIDVYENSY-QGRKCLLIVM 138 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCHHHHhHhhhhhhhcCCCceEEeehhhhhhc-cCceeeEeee
Confidence 4556544 58999999999988887655544 4788865555 6999999999985432 4567789999
Q ss_pred EecCCCCcccccccccc----------ccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC---CCceEEeccccccccc
Q 002376 727 EFLSNGSLGDWIHGERK----------NELDITSALDYLHNDCEVPVVHSDLKPGNILLDE---EMTAKVGDFGLARFLL 793 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~~----------~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~---~~~~ki~DfGla~~~~ 793 (929)
|+|+||.|+..+.+++. +..||+.|++|||+. +|.||||||+|+|... +..+|++|||+|+.-.
T Consensus 139 E~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~ 215 (400)
T KOG0604|consen 139 ECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ 215 (400)
T ss_pred ecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecccccccccC
Confidence 99999999999876553 356899999999998 9999999999999964 4579999999998532
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhc-ccch
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMT-SNES 872 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~ 872 (929)
. .......+-|+.|.|||++...+|+..+|+||.|+++|-+.-+.-++-. .-...+.+.++..+. ....
T Consensus 216 ~-------~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS---~hg~aispgMk~rI~~gqy~ 285 (400)
T KOG0604|consen 216 E-------PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS---NHGLAISPGMKRRIRTGQYE 285 (400)
T ss_pred C-------CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccc---cCCccCChhHHhHhhccCcc
Confidence 1 1223445779999999999999999999999999877654332222211 111233444433221 1223
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
...+.|.|+++..+++++..+..+|.+|-|+.|++.
T Consensus 286 FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 286 FPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred CCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 344567899999999999999999999999998864
No 262
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.95 E-value=8e-29 Score=269.40 Aligned_cols=227 Identities=18% Similarity=0.278 Sum_probs=163.5
Q ss_pred CCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
++|+..+.||+|+||.||++.... ..+.+.+|+.++++++||||+++++++... ...+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIE-----GAVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecC-----CeEE
Confidence 357788999999999999987641 134688999999999999999999988543 3589
Q ss_pred EEEEecCCCCcccccccc-----------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGE-----------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~-----------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
+||||+++++|.++++.. ..++.+++.|++|||+.+ +|+||||||+||+++.++.+||+|||+++.+
T Consensus 76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 153 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNL 153 (286)
T ss_pred EEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 999999999999887642 123568999999999642 8999999999999999999999999998765
Q ss_pred ccccCCCCCccccceeccccccccccccCCCC------CCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHh
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGER------PSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQL 866 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 866 (929)
... ......|++.|+|||++.+.. ++.++||||+|++++++.+...++..... .... ..+...
T Consensus 154 ~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~-~~~~~~ 222 (286)
T cd06622 154 VAS--------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY--ANIF-AQLSAI 222 (286)
T ss_pred cCC--------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch--hhHH-HHHHHH
Confidence 211 112236888999999986543 58899999999887776554444322111 1110 111111
Q ss_pred hcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 867 MTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..... ...+......+.+++.+||+.+|++||++++++.
T Consensus 223 ~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 223 VDGDP---PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred hhcCC---CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 11110 0111112223334777999999999999999886
No 263
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.95 E-value=4e-28 Score=261.00 Aligned_cols=230 Identities=21% Similarity=0.294 Sum_probs=165.3
Q ss_pred CCCCceeecccCceeEEeccccC-------------------------cHHHHHHHHHHHHccCCccccceeeecccCCC
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG-------------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS 716 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~-------------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~ 716 (929)
+|...+.||+|+||.||+|.... ..+.+.+|+.++++++||||+++++++...
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 78 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDA-- 78 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeC--
Confidence 35677899999999999986531 014577899999999999999999998543
Q ss_pred CCcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccc
Q 002376 717 KNMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788 (929)
Q Consensus 717 ~~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGl 788 (929)
...++||||+++++|.+++.... .++.+++.|++|||+. +++||||||+||++++++.+||+|||.
T Consensus 79 ---~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~ 152 (267)
T cd06628 79 ---DHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGI 152 (267)
T ss_pred ---CccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCC
Confidence 34799999999999999886432 3467899999999998 999999999999999999999999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhc
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMT 868 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 868 (929)
++...................|+..|+|||++.+..++.++||||+|++++++.....++..... ...+. ......
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~--~~~~~~- 228 (267)
T cd06628 153 SKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ-LQAIF--KIGENA- 228 (267)
T ss_pred CcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH-HHHHH--HHhccC-
Confidence 98764221111111112234688999999999998999999999999877775544333322111 10000 000000
Q ss_pred ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 869 SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
... ........+.+++.+||+.||++||++.|+++
T Consensus 229 -~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 229 -SPE----IPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred -CCc----CCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 000 11112222334777999999999999999875
No 264
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.95 E-value=9.3e-29 Score=269.04 Aligned_cols=232 Identities=21% Similarity=0.217 Sum_probs=167.8
Q ss_pred CCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
++|+..+.||.|++|.||++.... ..+++.+|++++++++||||++++++|...+ ....+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDES---SSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccC---CCeEE
Confidence 467888999999999999988641 2356889999999999999999999986532 33579
Q ss_pred EEEEecCCCCcccccccc------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGE------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
+||||+++++|.+++... ..++.|++.||+|||+. +++||||+|+||++++++.+||+|||++..
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~ 154 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGE 154 (287)
T ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccc
Confidence 999999999998876421 12467899999999998 999999999999999999999999999875
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcc-c
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTS-N 870 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~ 870 (929)
.... ......++..|+|||.+.+..++.++|||++|++++++..+..++...... ............. .
T Consensus 155 ~~~~--------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~ 224 (287)
T cd06621 155 LVNS--------LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP--PLGPIELLSYIVNMP 224 (287)
T ss_pred cccc--------ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC--CCChHHHHHHHhcCC
Confidence 4221 112345788999999999999999999999998887766555443322110 0000111111000 0
Q ss_pred -c--hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 871 -E--SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 871 -~--~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
. ...........+.+.+++.+||+.+|++||||.|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 225 NPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred chhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 0 0000000112233445888999999999999999986
No 265
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.95 E-value=6.9e-29 Score=265.10 Aligned_cols=227 Identities=23% Similarity=0.279 Sum_probs=167.2
Q ss_pred CCCCCceeecccCceeEEeccccC--------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG--------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~--------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
++|+..+.||+|+||.||+|.... ..+++.+|++++++++||||+++++++... ...|+|+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKN-----TDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecC-----CcEEEEE
Confidence 578888999999999999987652 245789999999999999999999998653 4489999
Q ss_pred EecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 727 EFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
||+++++|.+++.... .++.+++.|++|||+. +++|||++|+||++++++.+||+|||++.......
T Consensus 78 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~- 153 (256)
T cd06612 78 EYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM- 153 (256)
T ss_pred ecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCc-
Confidence 9999999999886322 3467899999999998 89999999999999999999999999998653221
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQL 877 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 877 (929)
.......|+..|+|||++.+..++.++||||+|++++++.....++..... .... ... ..........
T Consensus 154 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~-~~~~-----~~~-~~~~~~~~~~ 221 (256)
T cd06612 154 -----AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHP-MRAI-----FMI-PNKPPPTLSD 221 (256)
T ss_pred -----cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcch-hhhh-----hhh-ccCCCCCCCc
Confidence 112234588999999999998999999999999887776544333221111 0000 000 0000000000
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 878 HDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 878 ~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.......+.+++.+||+.||++|||+.|+++
T Consensus 222 ~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 222 PEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred hhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 1111122233777999999999999999975
No 266
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.95 E-value=4.1e-29 Score=270.81 Aligned_cols=229 Identities=23% Similarity=0.329 Sum_probs=165.4
Q ss_pred hCCCCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
.++|+..+.||+|+||.||++.... ..+.|.+|++++++++||||+++++++... ...+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 78 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYE-----NKLW 78 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecC-----CeEE
Confidence 3568888999999999999987641 235688999999999999999999998543 3489
Q ss_pred EEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
+||||+++|+|.+++.... .++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~ 155 (280)
T cd06611 79 ILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKS 155 (280)
T ss_pred EEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcc
Confidence 9999999999999886422 2467899999999998 999999999999999999999999999875421
Q ss_pred ccCCCCCccccceeccccccccccccC-----CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcc
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGL-----GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTS 869 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 869 (929)
. ........|++.|+|||++. +..++.++||||+|++++++.....++..... .+. +.....
T Consensus 156 ~------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~--~~~----~~~~~~- 222 (280)
T cd06611 156 T------LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP--MRV----LLKILK- 222 (280)
T ss_pred c------ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH--HHH----HHHHhc-
Confidence 1 11123456899999999875 34578899999999887776544433322111 000 111000
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
........++.....+.+++.+||+.+|++||++.++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 223 SEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0000000111112223347779999999999999999753
No 267
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.3e-28 Score=291.12 Aligned_cols=238 Identities=23% Similarity=0.378 Sum_probs=175.6
Q ss_pred HHhhCCCCCceeecccCceeEEecccc------------------------CcHHHHHHHHHHHHcc-CCccccceeeec
Q 002376 657 RRATGNFSHENLIGSGSFGSVLHNERT------------------------GSWKSFIAECETLRNV-RHRNLVKLITSC 711 (929)
Q Consensus 657 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~------------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~ 711 (929)
+...++.+..+.+|+|+||.|++|... .+.+.+..|+++|..+ +|||||.++|+|
T Consensus 292 e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~ 371 (609)
T KOG0200|consen 292 EIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGAC 371 (609)
T ss_pred eechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeee
Confidence 333444555679999999999987633 1356889999999998 599999999999
Q ss_pred ccCCCCCcceEEEEEEecCCCCccccccccc------------------------cccccHHHHHHHhhhCCCCCEEecC
Q 002376 712 SSLDSKNMEFLALVYEFLSNGSLGDWIHGER------------------------KNELDITSALDYLHNDCEVPVVHSD 767 (929)
Q Consensus 712 ~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~------------------------~~~~~ia~aL~yLH~~~~~~iiHrD 767 (929)
... +..++|+||++.|+|.++++..+ .++.|||.||+||++. ++||||
T Consensus 372 t~~-----~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRD 443 (609)
T KOG0200|consen 372 TQD-----GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRD 443 (609)
T ss_pred ccC-----CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchh
Confidence 763 34899999999999999998766 1257999999999998 899999
Q ss_pred CCCCCeeecCCCceEEeccccccccccccCCCCCccccceecc--ccccccccccCCCCCCCCCCCCCCcCCCCCcchhH
Q 002376 768 LKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMG--SIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVK 845 (929)
Q Consensus 768 lk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~ 845 (929)
+.++|||+.++..+||+|||+||..... .........| ...|||||.+....|+.|+||||||+.+||+ ..
T Consensus 444 LAaRNVLi~~~~~~kIaDFGlar~~~~~-----~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~Ei--fs 516 (609)
T KOG0200|consen 444 LAARNVLITKNKVIKIADFGLARDHYNK-----DYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEI--FT 516 (609)
T ss_pred hhhhhEEecCCCEEEEccccceeccCCC-----CceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHH--hh
Confidence 9999999999999999999999964321 1111111122 4469999999999999999999999988883 22
Q ss_pred HhhhcCCchhhhcc-ChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHH
Q 002376 846 WVESNLPENVLQVL-DPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQE 915 (929)
Q Consensus 846 ~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~ 915 (929)
+....+|. +. ...+.+.+.... .......|..++.. +|..||+.+|++||++.|+++.++....
T Consensus 517 LG~~PYp~----~~~~~~l~~~l~~G~-r~~~P~~c~~eiY~-iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 517 LGGTPYPG----IPPTEELLEFLKEGN-RMEQPEHCSDEIYD-LMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred CCCCCCCC----CCcHHHHHHHHhcCC-CCCCCCCCCHHHHH-HHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 22233332 11 122222111111 11112234555665 8999999999999999999999999644
No 268
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.95 E-value=1.1e-28 Score=270.99 Aligned_cols=237 Identities=20% Similarity=0.232 Sum_probs=166.3
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||+|+||.||++.... ..+.+.+|+++++.++||||+++++++.. ...
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFET-----KRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEec-----CCE
Confidence 368888999999999999886541 13457789999999999999999998854 335
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.++||||+++|+|.++++... .++.+++.|++|||+. +++||||||+||++++++.+|++|||+++...
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~ 152 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGL 152 (305)
T ss_pred EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccC
Confidence 899999999999999986432 2356899999999998 99999999999999999999999999987421
Q ss_pred cccCC---------CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHH
Q 002376 794 ERVDN---------QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELR 864 (929)
Q Consensus 794 ~~~~~---------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 864 (929)
..... ...........|+..|+|||++.+..++.++||||+|++++++.++..++... ...++......
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~--~~~~~~~~~~~ 230 (305)
T cd05609 153 MSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD--TPEELFGQVIS 230 (305)
T ss_pred cCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHh
Confidence 00000 00000112346788999999999889999999999998877765544333211 11111111111
Q ss_pred HhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 865 QLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
.... ..... ...+..+.+++.+||+.||++||++.++.+.++.
T Consensus 231 ~~~~-~~~~~----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 231 DDIE-WPEGD----EALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred cccC-CCCcc----ccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 1000 00000 0122223347779999999999997666666655
No 269
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.95 E-value=2.9e-28 Score=259.34 Aligned_cols=224 Identities=24% Similarity=0.307 Sum_probs=158.9
Q ss_pred eeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEecC
Q 002376 667 NLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLS 730 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~ 730 (929)
++||+|+||.||+|.... ....|.+|++++++++||||+++++++.... ..++||||++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~~ 75 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQ-----PIYIVMELVP 75 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCC-----ccEEEEECCC
Confidence 368999999999986431 1236889999999999999999999985433 4799999999
Q ss_pred CCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCC
Q 002376 731 NGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSS 801 (929)
Q Consensus 731 ~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 801 (929)
+|+|.+++.... .+..+++.|+.|+|+. +++||||||+||++++++.+|++|||+++.......
T Consensus 76 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~---- 148 (250)
T cd05085 76 GGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY---- 148 (250)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceecccccc----
Confidence 999999875321 2356899999999998 999999999999999999999999999875422111
Q ss_pred ccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHHH
Q 002376 802 ISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCL 881 (929)
Q Consensus 802 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 881 (929)
.......+++.|+|||++.+..++.++||||+|++++++.. .+..|... .............. +...+...
T Consensus 149 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~----~g~~p~~~--~~~~~~~~~~~~~~--~~~~~~~~ 219 (250)
T cd05085 149 -SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFS----LGVCPYPG--MTNQQAREQVEKGY--RMSCPQKC 219 (250)
T ss_pred -ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhc----CCCCCCCC--CCHHHHHHHHHcCC--CCCCCCCC
Confidence 01111234678999999998899999999999987766432 12222100 00001111000000 00001112
Q ss_pred HHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 002376 882 ITIIGSVGLSCTTESPGGRIGIREALRRLK 911 (929)
Q Consensus 882 ~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 911 (929)
...+.+++.+|++.+|++||++.|++++|.
T Consensus 220 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 220 PDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 223334888999999999999999999875
No 270
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.95 E-value=3.4e-28 Score=259.54 Aligned_cols=225 Identities=25% Similarity=0.348 Sum_probs=164.5
Q ss_pred CCCCCceeecccCceeEEeccccC------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEe
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF 728 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~ 728 (929)
++|+..+.||+|+||.||++...+ ..+.+.+|+.++++++|||++++++++... ..++||||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------~~~~v~e~ 79 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHN------GLYIVMEL 79 (254)
T ss_pred HHceeeeeeccCCCCceEecccCCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCC------CcEEEEEC
Confidence 357788999999999999987652 245788999999999999999999998532 26999999
Q ss_pred cCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 729 LSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 729 ~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
+++|+|.++++... .++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++.....
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~--- 153 (254)
T cd05083 80 MSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG--- 153 (254)
T ss_pred CCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceecccc---
Confidence 99999999886322 2356899999999997 9999999999999999999999999998754211
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTIQL 877 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 877 (929)
......+..|+|||++.+..++.++||||+|++++++.. ...++... ...+. .......... ..
T Consensus 154 ------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~--~~~~~-----~~~~~~~~~~--~~ 218 (254)
T cd05083 154 ------VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKM--SLKEV-----KECVEKGYRM--EP 218 (254)
T ss_pred ------CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccC--CHHHH-----HHHHhCCCCC--CC
Confidence 111234568999999998899999999999987777532 22211111 11111 1111111000 00
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 878 HDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 878 ~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
.+..+..+.+++.+||+.+|++||+++++++.|++
T Consensus 219 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 219 PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 11122223347889999999999999999998864
No 271
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.95 E-value=1.4e-28 Score=269.28 Aligned_cols=223 Identities=26% Similarity=0.339 Sum_probs=173.0
Q ss_pred hhCCCCCceeecccCceeEEecccc------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERT------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.+..|.....||+|.|++|..++.. ...+.+.+|+++|..++|||||+++.+.... .
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~-----~ 128 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETE-----A 128 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeec-----c
Confidence 4568889999999999999988765 1234588999999999999999999998543 3
Q ss_pred eEEEEEEecCCCCccccccc--------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~--------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.+|+||||+.+|.+++|+.. .+.+..|+.+|++|+|++ .|||||||++|||++.++.+||+|||++..+
T Consensus 129 ~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~ 205 (596)
T KOG0586|consen 129 TLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFF 205 (596)
T ss_pred eeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceee
Confidence 48999999999999999963 234467999999999998 8999999999999999999999999999877
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCC-CCCCCCCCCcCCCCCcchhHHhhhcCCch---hhhccChHHHHhhc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERP-STAGDVPTSESFAGEFNIVKWVESNLPEN---VLQVLDPELRQLMT 868 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~s~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~ 868 (929)
.. ......++|++.|.|||++.+..| ++++|+|+.|+++|.+. .+.+|.. +.+.-++-++..+.
T Consensus 206 ~~-------~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV-----~GsLPFDG~~lk~Lr~rvl~gk~r 273 (596)
T KOG0586|consen 206 DY-------GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALV-----EGSLPFDGQNLKELRPRVLRGKYR 273 (596)
T ss_pred cc-------cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeee-----ecccccCCcccccccchheeeeec
Confidence 42 223455799999999999999886 89999999998877654 4444431 11111222222111
Q ss_pred ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 869 SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
.+..+..-.++++++.+..+|.+|++++++.+.
T Consensus 274 --------Ip~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 274 --------IPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred --------ccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 112233334457779999999999999998753
No 272
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.95 E-value=6.4e-29 Score=270.79 Aligned_cols=224 Identities=25% Similarity=0.283 Sum_probs=162.8
Q ss_pred CCceeecccCceeEEecccc----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEE
Q 002376 664 SHENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYE 727 (929)
Q Consensus 664 ~~~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e 727 (929)
.....||+|+||.||++... ...+.+.+|+..++.++||||+++++++... ...++|||
T Consensus 25 ~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~-----~~~~lv~e 99 (292)
T cd06658 25 DSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVG-----DELWVVME 99 (292)
T ss_pred hhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecC-----CeEEEEEe
Confidence 33467999999999988653 1234688999999999999999999998543 34899999
Q ss_pred ecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCC
Q 002376 728 FLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQS 800 (929)
Q Consensus 728 ~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 800 (929)
|+++++|.+++...+ .++.+++.|++|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 100 ~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~---- 172 (292)
T cd06658 100 FLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV---- 172 (292)
T ss_pred CCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccc----
Confidence 999999999875332 3367899999999998 99999999999999999999999999987553211
Q ss_pred CccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHH
Q 002376 801 SISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDC 880 (929)
Q Consensus 801 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 880 (929)
.......|+..|+|||+..+..++.++||||+|++++++.+...++..... .+.+ ..+.......... ...
T Consensus 173 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--~~~~-~~~~~~~~~~~~~----~~~ 243 (292)
T cd06658 173 --PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP--LQAM-RRIRDNLPPRVKD----SHK 243 (292)
T ss_pred --ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHH-HHHHhcCCCcccc----ccc
Confidence 112234689999999999888899999999999887776554433321111 0000 0111111110000 011
Q ss_pred HHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 881 LITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 881 ~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
....+++++.+|++.||++|||++|+++
T Consensus 244 ~~~~~~~li~~~l~~~P~~Rpt~~~il~ 271 (292)
T cd06658 244 VSSVLRGFLDLMLVREPSQRATAQELLQ 271 (292)
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 2223344777999999999999999986
No 273
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.95 E-value=5.5e-29 Score=272.78 Aligned_cols=243 Identities=21% Similarity=0.264 Sum_probs=168.5
Q ss_pred CCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
++|...+.||+|+||.||+|+... ....+.+|++++++++||||+++++++... ...+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~-----~~~~ 80 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE-----KSLT 80 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecC-----CeEE
Confidence 578889999999999999986641 124577899999999999999999998543 3489
Q ss_pred EEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
+||||++ ++|.+++.... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 81 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 156 (301)
T cd07873 81 LVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSI 156 (301)
T ss_pred EEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCC
Confidence 9999997 68888775422 2357899999999998 999999999999999999999999999975421
Q ss_pred ccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhhhcCCc-h-h---hhcc----ChHHH
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVESNLPE-N-V---LQVL----DPELR 864 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~-~---~~~~----~~~l~ 864 (929)
.. .......+++.|+|||++.+. .++.++||||+|++++++.++..++..... . . ...+ +....
T Consensus 157 ~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (301)
T cd07873 157 PT------KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWP 230 (301)
T ss_pred CC------CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhch
Confidence 11 111223578999999988764 478999999999888887665544322111 0 0 0000 00000
Q ss_pred Hhhcccc-------hhh----hhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHHhhHHHHh
Q 002376 865 QLMTSNE-------SQT----IQLHDCLITIIGSVGLSCTTESPGGRIGIREALR--RLKSSQEILL 918 (929)
Q Consensus 865 ~~~~~~~-------~~~----~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~--~L~~~~~~~~ 918 (929)
....... ... ......+...+++++.+|++.||.+|||++|+++ .++...+.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~~~ 297 (301)
T cd07873 231 GILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGERIH 297 (301)
T ss_pred hhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccchhh
Confidence 0000000 000 0000112223445888999999999999999986 4555554444
No 274
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.95 E-value=5.6e-28 Score=259.04 Aligned_cols=230 Identities=22% Similarity=0.291 Sum_probs=167.3
Q ss_pred hCCCCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
.++|+..+.||+|+||.||++.... ..+.+.+|++++++++||||+++++++... ...+
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~ 76 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRR-----DKLW 76 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeC-----CEEE
Confidence 3578889999999999999987541 246788999999999999999999988543 3489
Q ss_pred EEEEecCCCCcccccccc-c--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGE-R--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~-~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
+||||+++++|.+++... . .+..|++.|++|||+. +++||||||+||++++++.+||+|||.+.....
T Consensus 77 l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 153 (262)
T cd06613 77 IVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTA 153 (262)
T ss_pred EEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhh
Confidence 999999999999988644 1 2367899999999998 999999999999999999999999999876532
Q ss_pred ccCCCCCccccceeccccccccccccCCC---CCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGE---RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
.. .......|+..|+|||++.+. .++.++||||+|++++++.....++..... ..... ......+.
T Consensus 154 ~~------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~-~~~~~-~~~~~~~~--- 222 (262)
T cd06613 154 TI------AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP-MRALF-LISKSNFP--- 222 (262)
T ss_pred hh------hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHH-HHHhccCC---
Confidence 11 112234688999999999877 789999999999887776554433322211 00000 00000000
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
............-+++++.+||..+|++|||+.|++.
T Consensus 223 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 223 PPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred CccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000001111222334788999999999999999874
No 275
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.95 E-value=1.6e-28 Score=261.61 Aligned_cols=225 Identities=24% Similarity=0.317 Sum_probs=161.6
Q ss_pred eeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEecC
Q 002376 667 NLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLS 730 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~ 730 (929)
++||+|+||.||++.... ..+.|.+|++++++++||||+++++++.... ..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~~v~e~~~ 75 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQ-----PIYIVMELVP 75 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC-----CeEEEEEcCC
Confidence 468999999999886541 2457889999999999999999999985433 4799999999
Q ss_pred CCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCC
Q 002376 731 NGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSS 801 (929)
Q Consensus 731 ~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 801 (929)
+++|.++++... ..+.+++.|++|||+. +++||||||+||++++++.+||+|||+++...... .
T Consensus 76 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~----~ 148 (251)
T cd05041 76 GGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGI----Y 148 (251)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCc----c
Confidence 999999885321 2246789999999998 89999999999999999999999999998653111 0
Q ss_pred ccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHH
Q 002376 802 ISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDC 880 (929)
Q Consensus 802 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 880 (929)
........++..|+|||++.+..++.++||||+|++.+++.. ...++..... ........... ....++.
T Consensus 149 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~-------~~~~~~~~~~~--~~~~~~~ 219 (251)
T cd05041 149 TVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN-------QQTRERIESGY--RMPAPQL 219 (251)
T ss_pred eeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH-------HHHHHHHhcCC--CCCCCcc
Confidence 011111234667999999998899999999999987777543 2222211111 01111111100 0001111
Q ss_pred HHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 881 LITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 881 ~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
.+..+.+++.+|++.+|++||++.|+++.|++
T Consensus 220 ~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 220 CPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 22234448889999999999999999998863
No 276
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.95 E-value=1.2e-28 Score=266.38 Aligned_cols=226 Identities=24% Similarity=0.289 Sum_probs=167.9
Q ss_pred CCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
++|+..+.||.|+||.||+|+... ....+.+|+++++.++||||+++++++.+. ...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG-----SKLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC-----CeEE
Confidence 367788899999999999987641 234688999999999999999999988543 3589
Q ss_pred EEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 796 (929)
+|+||+++++|.++++..+ ..+.|++.|++|||+. +++||||||+||++++++.++++|||+++.+....
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 76 IIMEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred EEEEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 9999999999999987542 3367899999999998 89999999999999999999999999998764221
Q ss_pred CCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhh
Q 002376 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQ 876 (929)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 876 (929)
.......|++.|+|||++.+..++.++||||+|++++++..+..++..... .+... .+.. .......
T Consensus 153 ------~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~--~~~~~-~~~~----~~~~~~~ 219 (274)
T cd06609 153 ------SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP--MRVLF-LIPK----NNPPSLE 219 (274)
T ss_pred ------cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch--HHHHH-Hhhh----cCCCCCc
Confidence 112334688999999999998999999999999888876555444322211 00000 0000 0000000
Q ss_pred hhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 877 LHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 877 ~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
... ....+.+++.+||+.+|++||+++++++
T Consensus 220 ~~~-~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 220 GNK-FSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ccc-cCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 000 1222334777999999999999999975
No 277
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.95 E-value=8.4e-29 Score=274.59 Aligned_cols=176 Identities=17% Similarity=0.136 Sum_probs=134.3
Q ss_pred ceeeccc--CceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEE
Q 002376 666 ENLIGSG--SFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 666 ~~~iG~G--~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV 725 (929)
.++||+| +||+||++.... ..+.+.+|+++++.++|||||+++++|... ...++|
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~-----~~~~lv 77 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD-----NELWVV 77 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC-----CEEEEE
Confidence 4689999 688999987651 123566799999999999999999998643 348999
Q ss_pred EEecCCCCcccccccc----------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 726 YEFLSNGSLGDWIHGE----------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~~----------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
|||+++|+|.+++... ..++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+......
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~ 154 (327)
T cd08227 78 TSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINH 154 (327)
T ss_pred EeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccc
Confidence 9999999999988532 12367899999999998 9999999999999999999999999876543211
Q ss_pred cCC-CCCccccceeccccccccccccCC--CCCCCCCCCCCCcCCCCCcchhHHhhh
Q 002376 796 VDN-QSSISSTHVFMGSIGYVPPEYGLG--ERPSTAGDVPTSESFAGEFNIVKWVES 849 (929)
Q Consensus 796 ~~~-~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~s~g~~~~~~~~~~~~~~ 849 (929)
... ...........++..|||||++.+ ..++.++||||+|++++++.....++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 211 (327)
T cd08227 155 GQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 211 (327)
T ss_pred cccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 100 000011122357788999999876 358999999999998888766555443
No 278
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.95 E-value=2.6e-28 Score=263.29 Aligned_cols=229 Identities=22% Similarity=0.305 Sum_probs=162.8
Q ss_pred CCCCceeecccCceeEEeccccC--------------------------cHHHHHHHHHHHHccCCccccceeeecccCC
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG--------------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLD 715 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~--------------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~ 715 (929)
+|...+.||+|+||.||+|.... ..+.+.+|+.++++++|||++++++++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTE- 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccC-
Confidence 46677899999999999986431 013577899999999999999999998543
Q ss_pred CCCcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccc
Q 002376 716 SKNMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFG 787 (929)
Q Consensus 716 ~~~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfG 787 (929)
...++||||+++|+|.++++... .++.+++.|++|||+. +++||||||+||++++++.+|++|||
T Consensus 81 ----~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~ 153 (272)
T cd06629 81 ----EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFG 153 (272)
T ss_pred ----CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecc
Confidence 34899999999999999886432 2357899999999997 99999999999999999999999999
Q ss_pred cccccccccCCCCCccccceeccccccccccccCCCC--CCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhccChHH
Q 002376 788 LARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER--PSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQVLDPEL 863 (929)
Q Consensus 788 la~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~l 863 (929)
+++...... .........|+..|+|||++.... ++.++||||+|++++++.....++..... ...+......
T Consensus 154 ~~~~~~~~~----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~ 229 (272)
T cd06629 154 ISKKSDDIY----DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRS 229 (272)
T ss_pred ccccccccc----cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhcccc
Confidence 997543211 111123346899999999987655 89999999999877775544433321111 0111000000
Q ss_pred HHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 864 RQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..... ......+...+++++.+||+.+|++||+++||++
T Consensus 230 ~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 230 APPIP------PDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred CCcCC------ccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 00000 0000112233344777999999999999999875
No 279
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.95 E-value=1.8e-28 Score=264.12 Aligned_cols=229 Identities=22% Similarity=0.315 Sum_probs=163.8
Q ss_pred CCCCceeecccCceeEEeccccC---------------------------cHHHHHHHHHHHHc-cCCccccceeeeccc
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG---------------------------SWKSFIAECETLRN-VRHRNLVKLITSCSS 713 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~---------------------------~~~~~~~E~~~l~~-l~Hpniv~l~~~~~~ 713 (929)
+|+..+.||+|+||.||+|.... ..+++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47778899999999999887642 12346678888865 799999999999854
Q ss_pred CCCCCcceEEEEEEecCCCCcccccccc------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCce
Q 002376 714 LDSKNMEFLALVYEFLSNGSLGDWIHGE------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA 781 (929)
Q Consensus 714 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ 781 (929)
. ...++||||+++++|.+++... ..++.|++.|+.|||+. .+++||||||+||++++++.+
T Consensus 81 ~-----~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~ 153 (269)
T cd08528 81 N-----DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKV 153 (269)
T ss_pred C-----CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcE
Confidence 3 3589999999999999887421 12356899999999963 179999999999999999999
Q ss_pred EEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccCh
Q 002376 782 KVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDP 861 (929)
Q Consensus 782 ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (929)
||+|||.+....... ......|+..|+|||++.+..++.++||||+|++++++.....++.... ..... .
T Consensus 154 ~l~dfg~~~~~~~~~-------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~--~~~~~-~ 223 (269)
T cd08528 154 TITDFGLAKQKQPES-------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN--MLSLA-T 223 (269)
T ss_pred EEecccceeeccccc-------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC--HHHHH-H
Confidence 999999998653211 1233468999999999999889999999999987777544333221111 10000 0
Q ss_pred HHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 862 ELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 862 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
.+... ..... ........+.+++.+||+.||++||++.|+..++++
T Consensus 224 ~~~~~----~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 224 KIVEA----VYEPL-PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred HHhhc----cCCcC-CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 11110 00000 000112223347779999999999999999998864
No 280
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.95 E-value=8.4e-28 Score=256.81 Aligned_cols=225 Identities=22% Similarity=0.290 Sum_probs=164.8
Q ss_pred CCCCceeecccCceeEEecccc------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERT------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+|+..+.||+|+||.||.++.. ...+++.+|++++++++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDD-----NTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecC-----CeEE
Confidence 4788899999999988776543 1235688999999999999999999998643 3589
Q ss_pred EEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
+||||+++|+|.+++.... .++.+++.|++|||+. +++||||||+||++++++.+||+|||.++...
T Consensus 76 ~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~ 152 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILG 152 (256)
T ss_pred EEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcc
Confidence 9999999999999986531 2356899999999998 89999999999999999999999999998653
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
.... ......|++.|+|||++.+..++.++||||+|++++++.....++... ...+.............
T Consensus 153 ~~~~------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~--~~~~~~~~~~~~~~~~~--- 221 (256)
T cd08221 153 SEYS------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDAT--NPLNLVVKIVQGNYTPV--- 221 (256)
T ss_pred cccc------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcCCCCCC---
Confidence 3211 122346899999999998888999999999998877764433222111 11111111111100000
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
. ......+.+++.+||+.+|++||++.|+++.
T Consensus 222 ~----~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 222 V----SVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred c----cccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 0 1111222337779999999999999999874
No 281
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.95 E-value=6.6e-28 Score=258.39 Aligned_cols=231 Identities=24% Similarity=0.342 Sum_probs=167.7
Q ss_pred hCCCCCceeecccCceeEEecccc--------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT--------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~--------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV 725 (929)
.++|...+.||+|+||.||++... ...+++.+|+.++++++||||+++++++... ...++|
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~~v 79 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEE-----EPIYIV 79 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecC-----CceEEE
Confidence 457888999999999999987653 1246789999999999999999999998543 347999
Q ss_pred EEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 726 YEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
|||+++++|.++++... .++.+++.|++|||+. +++||||||+||++++++.+|++|||.++.+...
T Consensus 80 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 80 TEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred EeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 99999999999986432 2356899999999998 8999999999999999999999999999865321
Q ss_pred cCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQT 874 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 874 (929)
. ........++..|+|||.+.+..++.++||||+|++++++.. ...++.... ..+..+. +...... ...
T Consensus 157 ~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~--~~~~~~~-~~~~~~~--~~~ 226 (261)
T cd05034 157 E-----YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT--NREVLEQ-VERGYRM--PRP 226 (261)
T ss_pred h-----hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHH-HHcCCCC--CCC
Confidence 1 011112234678999999998899999999999977766443 222221111 1111111 1110000 000
Q ss_pred hhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 875 IQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 875 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
...+. .+.+++.+|++.+|++||+++|+.+.|++
T Consensus 227 ~~~~~----~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 227 PNCPE----ELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCH----HHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 11112 23337779999999999999999999875
No 282
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.95 E-value=8.9e-28 Score=259.25 Aligned_cols=235 Identities=21% Similarity=0.306 Sum_probs=165.2
Q ss_pred CCCceeecccCceeEEecccc---------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCC-cc
Q 002376 663 FSHENLIGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN-ME 720 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~-~~ 720 (929)
|+..+.||+|+||.||+|.+. ...+++.+|++++++++||||+++++++......+ ..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456788999999999998642 11346789999999999999999999886543222 22
Q ss_pred eEEEEEEecCCCCcccccccc--------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecc
Q 002376 721 FLALVYEFLSNGSLGDWIHGE--------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDF 786 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~--------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~Df 786 (929)
..++++||+++|+|.+++... ..++.|++.|++|||+. +|+||||||+||++++++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 358899999999998776421 12357899999999998 9999999999999999999999999
Q ss_pred ccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHH
Q 002376 787 GLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQ 865 (929)
Q Consensus 787 Gla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ 865 (929)
|.++....... ........+++.|++||.+.+..++.++||||+|++.+++.. ...++..... ..+..
T Consensus 158 g~~~~~~~~~~----~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~-------~~~~~ 226 (273)
T cd05074 158 GLSKKIYSGDY----YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN-------SEIYN 226 (273)
T ss_pred cccccccCCcc----eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH-------HHHHH
Confidence 99986532110 011122345678999999998889999999999988777533 1111111110 11111
Q ss_pred hhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 866 LMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
.......... ...+...+. +++.+||+.+|++||++.|+++.|+++
T Consensus 227 ~~~~~~~~~~-~~~~~~~~~-~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 227 YLIKGNRLKQ-PPDCLEDVY-ELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHHcCCcCCC-CCCCCHHHH-HHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1100000000 001122333 388899999999999999999999876
No 283
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.95 E-value=2.3e-28 Score=272.25 Aligned_cols=247 Identities=21% Similarity=0.263 Sum_probs=170.7
Q ss_pred hCCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
+++|+..+.||+|+||.||+|.... ....+.+|+.++++++||||+++++++...........
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 4689999999999999999986531 23457789999999999999999998765543344568
Q ss_pred EEEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
++||||++ +++.++++... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 159 (336)
T cd07849 84 YIVQELME-TDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE 159 (336)
T ss_pred EEEehhcc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence 99999996 58877765322 3467899999999998 9999999999999999999999999999865322
Q ss_pred cCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhhhcCC-----------------chhhh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVESNLP-----------------ENVLQ 857 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~-----------------~~~~~ 857 (929)
.. .........||+.|||||++.+ ..++.++||||+|++++++.++..++.... +....
T Consensus 160 ~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (336)
T cd07849 160 HD---HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNC 236 (336)
T ss_pred cc---ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHH
Confidence 11 1111233578999999998755 468999999999998888765543332111 01111
Q ss_pred ccChHHHHhhcccch-hhhhhh---HHHHHHHHHHhccccCCCCCCCCCHHHHHHH--HHhh
Q 002376 858 VLDPELRQLMTSNES-QTIQLH---DCLITIIGSVGLSCTTESPGGRIGIREALRR--LKSS 913 (929)
Q Consensus 858 ~~~~~l~~~~~~~~~-~~~~~~---~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~--L~~~ 913 (929)
+.+............ ...... .....-+.+++.+||+.||++|||+.|+++. ++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~ 298 (336)
T cd07849 237 IISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY 298 (336)
T ss_pred hhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence 111111111100000 000000 0011223348889999999999999999875 5544
No 284
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.95 E-value=5e-28 Score=260.12 Aligned_cols=234 Identities=24% Similarity=0.283 Sum_probs=168.7
Q ss_pred CCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
++|+..+.||+|+||.||+|.... ..+.+.+|++.++.++||||+++++.+... ...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVG-----DELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeC-----CEEE
Confidence 478889999999999999987531 245788999999999999999999988543 3489
Q ss_pred EEEEecCCCCccccccccc-----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER-----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~-----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
+||||+++++|.++++... ....|++.|++|||+. +++||||||+||++++++.+|++|||++..+
T Consensus 76 iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~ 152 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASL 152 (267)
T ss_pred EEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHh
Confidence 9999999999999986421 2356899999999998 9999999999999999999999999999876
Q ss_pred ccccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
....... ........|+..|+|||++... .++.++||||+|++++++..+..++...+. .+........ .....
T Consensus 153 ~~~~~~~--~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~--~~~~~~~~~~-~~~~~ 227 (267)
T cd06610 153 ADGGDRT--RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPP--MKVLMLTLQN-DPPSL 227 (267)
T ss_pred ccCcccc--ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccCh--hhhHHHHhcC-CCCCc
Confidence 4321111 0122345789999999998877 789999999999887776555444332221 0101011110 00000
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..... ...+...+.+++.+||+.||++||++.|+++
T Consensus 228 ~~~~~-~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 228 ETGAD-YKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CCccc-cccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000 0012223334778999999999999999875
No 285
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.95 E-value=1.2e-27 Score=255.82 Aligned_cols=225 Identities=22% Similarity=0.314 Sum_probs=164.9
Q ss_pred CCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+|+..+.||+|+||.||++.... ..+.+.+|++++++++|||++++++.+... ....+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGE----DGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCC----CCEEE
Confidence 47888999999999999876541 134678899999999999999999876432 23479
Q ss_pred EEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
+||||+++++|.++++... .++.+++.|++|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 77 lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~ 153 (257)
T cd08223 77 IVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLE 153 (257)
T ss_pred EEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEec
Confidence 9999999999999886421 3357899999999998 99999999999999999999999999998653
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
... .......|++.|+|||+..+..++.++||||+|++++++.....++.... ..+...........
T Consensus 154 ~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~--~~~~~~~~~~~~~~----- 220 (257)
T cd08223 154 NQC------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD--MNSLVYRIIEGKLP----- 220 (257)
T ss_pred ccC------CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHhcCCC-----
Confidence 211 11233468999999999999999999999999988777554333222111 11111111111110
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.........+.+++.+|++.+|++||++.|+++
T Consensus 221 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 221 --PMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred --CCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 011112233444788999999999999999975
No 286
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.95 E-value=2.2e-28 Score=266.75 Aligned_cols=228 Identities=23% Similarity=0.259 Sum_probs=167.7
Q ss_pred CCCCCceeecccCceeEEecccc----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
++|+..+.||+|+||.||++... ...+.+.+|+.++++++||||+++++++... ...|+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~-----~~~~l 93 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVG-----DELWV 93 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeC-----CcEEE
Confidence 57888899999999999998643 1235678899999999999999999998543 34899
Q ss_pred EEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 725 VYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
|+||+++|+|.+++.+.. .++.+++.|++|||+. +++|||+||+||+++.++.+||+|||++.......
T Consensus 94 v~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~- 169 (293)
T cd06647 94 VMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ- 169 (293)
T ss_pred EEecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceecccccc-
Confidence 999999999999886432 2356899999999998 99999999999999999999999999987553211
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQL 877 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 877 (929)
.......|++.|+|||++.+..++.++||||+|++++++.....++..... ..++. . ... ........
T Consensus 170 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~-~~~~~-~-~~~----~~~~~~~~ 237 (293)
T cd06647 170 -----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP-LRALY-L-IAT----NGTPELQN 237 (293)
T ss_pred -----cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-hhhee-e-hhc----CCCCCCCC
Confidence 111234688999999999888899999999999877775544333321111 01100 0 000 00001111
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 878 HDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 878 ~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
.+.+...+++++.+||+.+|++||++++++..
T Consensus 238 ~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 238 PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 12233344558889999999999999999854
No 287
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.95 E-value=2e-28 Score=262.66 Aligned_cols=229 Identities=25% Similarity=0.317 Sum_probs=165.3
Q ss_pred CCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+|+..+.||+|+||.||++.... ..+++.+|++++++++||||+++++++... .....+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDR---SNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecC---CCCEEE
Confidence 47778999999999999886531 234678899999999999999999987642 234579
Q ss_pred EEEEecCCCCcccccccc------------ccccccHHHHHHHhhhCC--CCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 724 LVYEFLSNGSLGDWIHGE------------RKNELDITSALDYLHNDC--EVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~------------~~~~~~ia~aL~yLH~~~--~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
+||||+++++|.+++... ..++.+++.|++|||..+ ..+++||||||+||++++++.+|++|||++
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred EEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccc
Confidence 999999999999988532 123578999999999332 238999999999999999999999999999
Q ss_pred cccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcc
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTS 869 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 869 (929)
+...... .......|++.|+|||++.+..++.++|||++|++++++.....++..... . .+.+....
T Consensus 158 ~~~~~~~------~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~-----~~~~~~~~ 224 (265)
T cd08217 158 KILGHDS------SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ--L-----QLASKIKE 224 (265)
T ss_pred ccccCCc------ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH--H-----HHHHHHhc
Confidence 8763221 111234689999999999998899999999999877775544333322211 1 11111110
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
... ...+......+.+++.+|++.+|++||++.+|++
T Consensus 225 ~~~--~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 225 GKF--RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred CCC--CCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 000 0011112222334777999999999999999986
No 288
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.95 E-value=1.1e-27 Score=257.86 Aligned_cols=231 Identities=20% Similarity=0.317 Sum_probs=167.4
Q ss_pred CCCCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
+|+..+.||+|+||.||++.... ..+.+.+|++++++++||||+++++++.+.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCED----- 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccC-----
Confidence 47778999999999999876431 135688999999999999999999998543
Q ss_pred ceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC-ceEEecccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM-TAKVGDFGLAR 790 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~-~~ki~DfGla~ 790 (929)
+..++||||+++++|.+++.... .++.|++.||+|||+. +++||||||+||+++.++ .+||+|||.++
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~ 152 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAA 152 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccc
Confidence 34899999999999999886432 2357899999999998 999999999999998776 69999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhcc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMTS 869 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~ 869 (929)
.+....... ........|+..|+|||++.+..++.++|||++|++++++.....++..... .... ........
T Consensus 153 ~~~~~~~~~--~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~----~~~~~~~~ 226 (268)
T cd06630 153 RLAAKGTGA--GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA----LIFKIASA 226 (268)
T ss_pred ccccccccC--CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHH----HHHHHhcc
Confidence 764321111 1112234689999999999888899999999999888776655444322111 0000 01110000
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
. .....++....-+.+++.+|++.+|++||++.|++.
T Consensus 227 ~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 227 T--TAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred C--CCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 0 011112223333444788999999999999999874
No 289
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.95 E-value=1.4e-28 Score=268.78 Aligned_cols=223 Identities=24% Similarity=0.263 Sum_probs=161.6
Q ss_pred ceeecccCceeEEecccc----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEec
Q 002376 666 ENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFL 729 (929)
Q Consensus 666 ~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~ 729 (929)
...||+|+||.||++... ...+.+.+|+.+++.++||||+++++++... ...++||||+
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~-----~~~~iv~e~~ 100 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVG-----EELWVLMEFL 100 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeC-----CeEEEEEecC
Confidence 457999999999998653 1245688999999999999999999998543 3489999999
Q ss_pred CCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCCc
Q 002376 730 SNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSI 802 (929)
Q Consensus 730 ~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~ 802 (929)
++++|.+++.... .++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 101 ~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~------ 171 (297)
T cd06659 101 QGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV------ 171 (297)
T ss_pred CCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccc------
Confidence 9999998775422 2367899999999998 99999999999999999999999999987553211
Q ss_pred cccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHHHH
Q 002376 803 SSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLI 882 (929)
Q Consensus 803 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 882 (929)
.......|+..|+|||++.+..++.++||||+|++++++.....++..... . +.+ ..+.. .............
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-~-~~~-~~~~~----~~~~~~~~~~~~~ 244 (297)
T cd06659 172 PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP-V-QAM-KRLRD----SPPPKLKNAHKIS 244 (297)
T ss_pred ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-H-HHH-HHHhc----cCCCCccccCCCC
Confidence 112235789999999999988999999999999887776544333221111 0 000 00110 0000000000111
Q ss_pred HHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 883 TIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 883 ~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
..+.+++.+|++.+|++||+++|+++.
T Consensus 245 ~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 245 PVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 223347779999999999999999874
No 290
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.95 E-value=1.4e-27 Score=256.64 Aligned_cols=230 Identities=22% Similarity=0.240 Sum_probs=164.7
Q ss_pred CCCCCceeecccCceeEEeccccC---------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG---------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~---------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
.+|+..+.||+|+||.||+|.... ..+.+.+|++++++++||||+++++++.+.. .
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPM---E 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCC---C
Confidence 468889999999999999886531 1246778999999999999999999875422 2
Q ss_pred ceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..+++||||+++|+|.+++.... ..+.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 35789999999999999885432 2467899999999998 899999999999999999999999999986
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
...... .........|+..|+|||++.+..++.++||||+|++++++.....++...+. ... ........
T Consensus 156 ~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-~~~-----~~~~~~~~- 225 (265)
T cd06652 156 LQTICL---SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA-MAA-----IFKIATQP- 225 (265)
T ss_pred cccccc---cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch-HHH-----HHHHhcCC-
Confidence 532111 11112334689999999999888899999999999877775544333322211 100 01100000
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.....+......+.+++.+|+. +|++||+++|+++
T Consensus 226 -~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 226 -TNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred -CCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 0011112233333346668884 8999999999875
No 291
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.95 E-value=4.8e-28 Score=271.47 Aligned_cols=177 Identities=25% Similarity=0.288 Sum_probs=141.2
Q ss_pred hhCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCC-CCc
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS-KNM 719 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-~~~ 719 (929)
..++|+..+.||+|+||.||++.... ..+.+.+|+.++++++||||+++++++..... ...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 34689999999999999999987541 12456789999999999999999998864332 122
Q ss_pred ceEEEEEEecCCCCcccccccc------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGE------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
...|+||||++ ++|.+++... ..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 169 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 169 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence 35799999996 5887766422 23467899999999998 99999999999999999999999999998653
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHH
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~ 846 (929)
.. .......|+..|+|||++.+..++.++||||+|++++++..+..
T Consensus 170 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~ 215 (353)
T cd07850 170 TS-------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTV 215 (353)
T ss_pred CC-------CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCC
Confidence 21 11223468899999999999999999999999988887655443
No 292
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.95 E-value=1.6e-28 Score=266.94 Aligned_cols=169 Identities=28% Similarity=0.386 Sum_probs=135.3
Q ss_pred CCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+|+..+.||+|+||.||+|+... ..+.+.+|+.++++++||||+++++++... ...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQE-----SRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeC-----CeEE
Confidence 47778999999999999987541 135678999999999999999999998643 3489
Q ss_pred EEEEecCCCCccccccccc-----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER-----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~-----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
+||||++ |+|.+++.... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 151 (285)
T cd07861 76 LIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAF 151 (285)
T ss_pred EEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeec
Confidence 9999997 68887765321 2367899999999998 9999999999999999999999999999754
Q ss_pred ccccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhH
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVK 845 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~ 845 (929)
... ........+++.|+|||++.+. .++.++||||+|++++++.+..
T Consensus 152 ~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~ 199 (285)
T cd07861 152 GIP------VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKK 199 (285)
T ss_pred CCC------cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCC
Confidence 221 1111223578899999988654 4789999999998887765543
No 293
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.95 E-value=1.2e-27 Score=255.55 Aligned_cols=224 Identities=23% Similarity=0.300 Sum_probs=164.9
Q ss_pred CCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+|+..+.||+|+||.||+++... ..+++.+|+.++++++||||+++++++.. ....+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEE-----NGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecC-----CCeEE
Confidence 47788999999999999876531 23468899999999999999999999854 34589
Q ss_pred EEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
+||||+++++|.++++... .++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||++....
T Consensus 76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~ 152 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLN 152 (256)
T ss_pred EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecC
Confidence 9999999999998886422 2357899999999998 99999999999999999999999999997653
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
... .......|++.|+|||+..+..++.++||||+|++++++.....++.. ....+.++....+.... .
T Consensus 153 ~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~--~~~~~~~~~~~~~~~~~---~ 221 (256)
T cd08218 153 STV------ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEA--GNMKNLVLKIIRGSYPP---V 221 (256)
T ss_pred cch------hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccC--CCHHHHHHHHhcCCCCC---C
Confidence 211 111234688999999999998999999999999877765443322211 11111111111111100 0
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
......-+.+++.+||+.+|++||+|+||++
T Consensus 222 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 222 ----SSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred ----cccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0111222334777999999999999999986
No 294
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.95 E-value=6.2e-28 Score=261.10 Aligned_cols=223 Identities=24% Similarity=0.283 Sum_probs=163.6
Q ss_pred CCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
.|+..+.||+|+||.||+|.... ..+.+.+|++++++++||||+++++++... ...++
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 79 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKG-----TKLWI 79 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccC-----CceEE
Confidence 35556789999999999986531 124688999999999999999999998543 34899
Q ss_pred EEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 725 VYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
||||+++++|.+++.... ..+.+++.|++|||+. +++|+||||+||++++++.+|++|||+++.+....
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06642 80 IMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ- 155 (277)
T ss_pred EEEccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcc-
Confidence 999999999999876432 2367899999999997 99999999999999999999999999998653211
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhcccchhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMTSNESQTIQ 876 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~ 876 (929)
.......|+..|+|||++.+..++.++||||+|++++++..+..++..... .... .+.. .. ...
T Consensus 156 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~----~~~~----~~--~~~ 220 (277)
T cd06642 156 -----IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF----LIPK----NS--PPT 220 (277)
T ss_pred -----hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh----hhhc----CC--CCC
Confidence 112234688999999999998999999999999887776544333221111 1000 0000 00 000
Q ss_pred hhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 877 LHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 877 ~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.......-+.+++.+||+.+|++||+|.|+++
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 221 LEGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred CCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 00111222334778999999999999999987
No 295
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.95 E-value=1.7e-28 Score=266.63 Aligned_cols=169 Identities=26% Similarity=0.414 Sum_probs=135.0
Q ss_pred CCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+|+..+.||+|+||.||+|+... ..+.+.+|++++++++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSD-----KKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccC-----CceE
Confidence 47778999999999999987641 123577899999999999999999998543 3489
Q ss_pred EEEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
+|+||++ ++|.+++... ..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 76 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 151 (284)
T cd07839 76 LVFEYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGI 151 (284)
T ss_pred EEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCC
Confidence 9999997 5787776532 23367899999999998 999999999999999999999999999986532
Q ss_pred ccCCCCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCcchhH
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEFNIVK 845 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~~~~~ 845 (929)
.. .......+++.|+|||++.+.. ++.++||||+|++++++....
T Consensus 152 ~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~ 197 (284)
T cd07839 152 PV------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG 197 (284)
T ss_pred CC------CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcC
Confidence 11 1112236789999999987754 799999999998888765443
No 296
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.94 E-value=3.2e-28 Score=264.60 Aligned_cols=173 Identities=26% Similarity=0.368 Sum_probs=139.5
Q ss_pred CCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
++|+..+.||+|+||.||+|+... ..+.+.+|++++++++|||++++++++.. ....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR-----KRKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee-----CCEE
Confidence 468888999999999999987641 12457899999999999999999999854 3358
Q ss_pred EEEEEecCCCCcccccccc--------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGE--------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~--------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
++||||++++.+..+.+.. ..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 76 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07847 76 HLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTG 152 (286)
T ss_pred EEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCC
Confidence 9999999998888776432 23467899999999997 999999999999999999999999999986632
Q ss_pred ccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWV 847 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~ 847 (929)
... ......++..|+|||++.+ ..++.++||||+|++++++.+...+
T Consensus 153 ~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p 200 (286)
T cd07847 153 PGD------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPL 200 (286)
T ss_pred Ccc------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCC
Confidence 211 1123357889999999876 4579999999999888876655433
No 297
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=7.1e-28 Score=242.02 Aligned_cols=217 Identities=26% Similarity=0.283 Sum_probs=164.0
Q ss_pred hCCCCCceeecccCceeEEeccccCc-------------------HHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTGS-------------------WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~~-------------------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
-++|+..+++|+|.||+|..++-+.. ...-..|-++++..+||.+..+...| +...
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsF-----Qt~d 241 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSF-----QTQD 241 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhh-----ccCc
Confidence 35788899999999999987765521 11233588899999999999988776 3445
Q ss_pred eEEEEEEecCCCCcccccccc--------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGE--------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~--------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
++|+||||+.||.|+-++... |.+..+|..||.|||++ +||.||+|.+|.|+|.+|.+||+|||+++.-
T Consensus 242 rlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~ 318 (516)
T KOG0690|consen 242 RLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEE 318 (516)
T ss_pred eEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhc
Confidence 699999999999999988743 34467899999999998 9999999999999999999999999999842
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhcccc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~ 871 (929)
-........++|||.|.|||++....|+.++|-|..|+++|||.-+.+++..-.. .+.+.+-..-..
T Consensus 319 ------I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~k------ 386 (516)
T KOG0690|consen 319 ------IKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLK------ 386 (516)
T ss_pred ------ccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhcc------
Confidence 1223345678999999999999999999999999999999988776666554433 333332221111
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCC
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRI 901 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP 901 (929)
.+-...+.... +....+..||.+|-
T Consensus 387 -FPr~ls~eAkt----LLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 387 -FPRTLSPEAKT----LLSGLLKKDPKKRL 411 (516)
T ss_pred -CCccCCHHHHH----HHHHHhhcChHhhc
Confidence 11111122233 44477889999995
No 298
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.94 E-value=5.3e-28 Score=266.97 Aligned_cols=230 Identities=24% Similarity=0.262 Sum_probs=165.5
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||+|+||.||++.... ..+.+.+|+++++.++||||+++++++.. ...
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQT-----ETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeec-----CCE
Confidence 368888999999999999987641 23457889999999999999999999854 345
Q ss_pred EEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
.++||||+++++|.+++.... .++.|++.||+|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 152 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQ 152 (316)
T ss_pred EEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhc
Confidence 899999999999999886431 1256899999999998 999999999999999999999999999876
Q ss_pred cccccCCCC-----------------------CccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 792 LLERVDNQS-----------------------SISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 792 ~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
......... .........||..|+|||++.+..++.++||||+|++++++.....++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf 232 (316)
T cd05574 153 SDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPF 232 (316)
T ss_pred ccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCC
Confidence 532111000 000112357899999999999999999999999998877765544443
Q ss_pred hcCCc--hhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCC----HHHHHH
Q 002376 849 SNLPE--NVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIG----IREALR 908 (929)
Q Consensus 849 ~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs----~~ev~~ 908 (929)
..... ...++.+.. .... ....+...+.+++.+|++.||++||+ ++|++.
T Consensus 233 ~~~~~~~~~~~~~~~~--------~~~~--~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 233 KGSNRDETFSNILKKE--------VTFP--GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred CCCchHHHHHHHhcCC--------ccCC--CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 22211 111111110 0000 00002223334777999999999999 555554
No 299
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=5.2e-29 Score=242.15 Aligned_cols=174 Identities=25% Similarity=0.435 Sum_probs=138.1
Q ss_pred CCCCceeecccCceeEEeccccCcH------------------HHHHHHHHHHHccCCccccceeeecccCCCC---Ccc
Q 002376 662 NFSHENLIGSGSFGSVLHNERTGSW------------------KSFIAECETLRNVRHRNLVKLITSCSSLDSK---NME 720 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~~~------------------~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~---~~~ 720 (929)
.|....+||+|.||+||+|+..... ....+|+.++..++|+|++.+++.|.+.+.. ...
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 4555678999999999999877332 2345899999999999999999999876543 234
Q ss_pred eEEEEEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
.+|+||++|+. +|.-.+... ++...++..||.|+|+. .|+|||+||+|+||+.+|.+||+|||+||.
T Consensus 98 t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGlar~ 173 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLARA 173 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccccccc
Confidence 58999999975 777666533 23356789999999998 899999999999999999999999999987
Q ss_pred cccccCCCCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEF 841 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~ 841 (929)
+........ ...+..+-|.+|++||.+.|.+ |+++.|||..||++.++
T Consensus 174 fs~~~n~~k--prytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeM 222 (376)
T KOG0669|consen 174 FSTSKNVVK--PRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEM 222 (376)
T ss_pred eecccccCC--CCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHH
Confidence 753322211 2234556799999999998865 89999999999987664
No 300
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.94 E-value=2.5e-28 Score=262.31 Aligned_cols=229 Identities=19% Similarity=0.285 Sum_probs=165.6
Q ss_pred CCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
++|+..+.||+|+||.||++.... ..+++.+|++++++++||||+++++++... ...+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNN-----GDIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecC-----CEEE
Confidence 357778899999999999987651 235688999999999999999999998543 4589
Q ss_pred EEEEecCCCCcccccccc-c--------cccccHHHHHHHhhh-CCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGE-R--------KNELDITSALDYLHN-DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~-~--------~~~~~ia~aL~yLH~-~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
+|+||+++++|.+++... . .++.+++.|++|||+ . +++||||||+||++++++.+||+|||.+....
T Consensus 76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~ 152 (265)
T cd06605 76 ICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLV 152 (265)
T ss_pred EEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhH
Confidence 999999999999998743 1 235789999999999 6 99999999999999999999999999987653
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
... .....|+..|+|||++.+..++.++||||+|++++++.....++........... ..+...... ...
T Consensus 153 ~~~--------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~-~~~ 222 (265)
T cd06605 153 NSL--------AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIF-ELLQYIVNE-PPP 222 (265)
T ss_pred HHH--------hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHH-HHHHHHhcC-CCC
Confidence 211 1115788999999999999999999999999877775544333322210000000 011111110 000
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
...... ....+.+++.+||..||++|||+.|++.
T Consensus 223 ~~~~~~-~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 223 RLPSGK-FSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred CCChhh-cCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 000000 2222334777999999999999999874
No 301
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.94 E-value=2e-28 Score=266.25 Aligned_cols=170 Identities=28% Similarity=0.430 Sum_probs=137.9
Q ss_pred CCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
++|+..+.||+|+||.||+|.+.. ..+.+.+|+++++.++||||+++++++.. ....
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRR-----KKRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhccc-----CCeE
Confidence 468888999999999999988641 13467889999999999999999999853 3458
Q ss_pred EEEEEecCCCCcccccccc--------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGE--------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~--------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
++||||++++++.++.... ..++.||+.|++|||+. +++|||+||+||++++++.+||+|||+++.+..
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07846 76 YLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 152 (286)
T ss_pred EEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence 9999999999888776432 13367899999999998 999999999999999999999999999886532
Q ss_pred ccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIV 844 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~ 844 (929)
.. .......|+..|+|||++.+. .++.++||||+|++++++.++
T Consensus 153 ~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g 197 (286)
T cd07846 153 PG------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTG 197 (286)
T ss_pred Cc------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcC
Confidence 21 112234678999999998764 478999999999888776554
No 302
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.94 E-value=8e-28 Score=262.09 Aligned_cols=220 Identities=25% Similarity=0.309 Sum_probs=163.1
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||+|+||.||++.... ..+.+.+|++++++++||||+++++++... ..
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDD-----SN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcC-----Ce
Confidence 468888999999999999887641 234577899999999999999999998543 34
Q ss_pred EEEEEEecCCCCcccccccccc--------ccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGERK--------NELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~~--------~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.++||||+++|+|.++++.... ++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 152 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVK 152 (290)
T ss_pred EEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccC
Confidence 8999999999999999864332 357899999999997 99999999999999999999999999998653
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
.. .....|++.|+|||.+.+..++.++||||+|++++++.....++..... .+. ..........
T Consensus 153 ~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~----~~~~~~~~~~- 216 (290)
T cd05580 153 GR---------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP--IQI----YEKILEGKVR- 216 (290)
T ss_pred CC---------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--HHH----HHHHhcCCcc-
Confidence 21 2234689999999999888899999999999877776554443322111 000 0000000000
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCC-----CHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRI-----GIREAL 907 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~ 907 (929)
.+.....-+++++.+||+.||++|| +++|++
T Consensus 217 ---~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 217 ---FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred ---CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 0111122233367799999999999 666665
No 303
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.94 E-value=7e-28 Score=262.22 Aligned_cols=173 Identities=27% Similarity=0.373 Sum_probs=140.0
Q ss_pred CCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
++|+..+.||+|+||.||+|.... ..+.+.+|++++++++||||+++++++... ...
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRK-----GRL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEEC-----CEE
Confidence 368888999999999999987641 134688999999999999999999998543 348
Q ss_pred EEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
++||||++++.+..+..... .++.+|+.|++|||+. +++|||+||+||++++++.+||+|||+++....
T Consensus 76 ~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~ 152 (288)
T cd07833 76 YLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRA 152 (288)
T ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCC
Confidence 99999999877766554221 2367899999999998 999999999999999999999999999987643
Q ss_pred ccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHH
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKW 846 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~ 846 (929)
... .......++..|+|||++.+. .++.++||||+|++++++.....
T Consensus 153 ~~~-----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~ 200 (288)
T cd07833 153 RPA-----SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEP 200 (288)
T ss_pred Ccc-----ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCC
Confidence 211 112234688999999999888 78999999999988877655443
No 304
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.94 E-value=3.8e-28 Score=264.85 Aligned_cols=174 Identities=25% Similarity=0.328 Sum_probs=137.1
Q ss_pred hhCCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++++|...+.||+|+||.||+|.... ....+.+|+.+++.++|+||+++++++... ..
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~-----~~ 77 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTK-----ET 77 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecC-----Ce
Confidence 46789999999999999999986531 123577899999999999999999998543 34
Q ss_pred EEEEEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.++||||++ +++.+++... +.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 78 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~ 153 (291)
T cd07870 78 LTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAK 153 (291)
T ss_pred EEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEecccccccc
Confidence 899999995 6776665421 22367899999999998 9999999999999999999999999999754
Q ss_pred ccccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHh
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWV 847 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~ 847 (929)
.... .......+++.|+|||++.+. .++.++||||+|++++++.....+
T Consensus 154 ~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~ 203 (291)
T cd07870 154 SIPS------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPA 203 (291)
T ss_pred CCCC------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 2211 111223578999999998764 478999999999887776554433
No 305
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.94 E-value=1.6e-27 Score=257.94 Aligned_cols=225 Identities=24% Similarity=0.297 Sum_probs=165.6
Q ss_pred CCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
.|+..+.||+|+||.||+|.... ..+.+.+|++++++++||||+++++++... ...++
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 79 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG-----TKLWI 79 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-----CEEEE
Confidence 56677889999999999987541 134688899999999999999999998543 35899
Q ss_pred EEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 725 VYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
||||+++|+|.+++.... ..+.+++.|++|+|+. +++|+||+|+||+++.++.++++|||+++......
T Consensus 80 v~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06640 80 IMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ- 155 (277)
T ss_pred EEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCc-
Confidence 999999999999886432 2356899999999998 99999999999999999999999999997653211
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQL 877 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 877 (929)
.......++..|+|||++.+..++.++||||+|++++++.....++..... .+ ......... ....
T Consensus 156 -----~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~--~~-----~~~~~~~~~--~~~~ 221 (277)
T cd06640 156 -----IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHP--MR-----VLFLIPKNN--PPTL 221 (277)
T ss_pred -----cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcCh--Hh-----HhhhhhcCC--CCCC
Confidence 112234688899999999988999999999999887776544333221110 00 000000000 0111
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 878 HDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 878 ~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
......-+.+++.+||+.+|++||++.|+++.
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 222 TGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred chhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 11122233348889999999999999999754
No 306
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.94 E-value=2.4e-27 Score=253.20 Aligned_cols=223 Identities=23% Similarity=0.354 Sum_probs=162.3
Q ss_pred CCCCceeecccCceeEEecccc------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERT------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+|+..+.||+|+||.||++... ...+.+.+|++++++++||||+++++++.. ....+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE-----DKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec-----CCEEE
Confidence 4778899999999999987653 124578899999999999999999998743 33589
Q ss_pred EEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC-CceEEecccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE-MTAKVGDFGLARFL 792 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~-~~~ki~DfGla~~~ 792 (929)
+||||+++++|.+++.... .++.+++.|++|||+. +++||||||+||+++++ +.+|++|||+++..
T Consensus 76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~ 152 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKIL 152 (256)
T ss_pred EEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceec
Confidence 9999999999999986432 2246899999999998 99999999999999855 46899999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
... .......|+..|+|||++.+..++.++||||+|++++++.....++.... ........... ...
T Consensus 153 ~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~--~~~~~~~~~~~----~~~ 219 (256)
T cd08220 153 SSK-------SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN--LPALVLKIMSG----TFA 219 (256)
T ss_pred CCC-------ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc--hHHHHHHHHhc----CCC
Confidence 321 11123468899999999998889999999999987777554433322111 11111010100 000
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
+..+....-+++++.+||+.+|++|||++|+++
T Consensus 220 ---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 220 ---PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred ---CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 001111222334777999999999999999975
No 307
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.94 E-value=1.1e-27 Score=263.35 Aligned_cols=221 Identities=27% Similarity=0.338 Sum_probs=158.1
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
+.|+..+.||+|+||.||+|.... ..+++.+|+++++.++||||++++++|...+ .
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~-----~ 89 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREH-----T 89 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCC-----e
Confidence 458888999999999999986531 1246889999999999999999999996533 3
Q ss_pred EEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.++||||++ |++.+++.... .++.|++.||.|||+. +|+||||+|+||++++++.+||+|||+++..
T Consensus 90 ~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~ 165 (307)
T cd06607 90 AWLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLV 165 (307)
T ss_pred EEEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceec
Confidence 799999996 57766554211 2357899999999998 9999999999999999999999999998754
Q ss_pred ccccCCCCCccccceeccccccccccccC---CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGL---GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTS 869 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 869 (929)
.. .....|+..|+|||++. .+.++.++||||+|++++++..+..++..... . . ..... ..
T Consensus 166 ~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~-~-~----~~~~~-~~ 228 (307)
T cd06607 166 SP----------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-M-S----ALYHI-AQ 228 (307)
T ss_pred CC----------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH-H-H----HHHHH-hc
Confidence 21 12346788999999874 45689999999999887775544322211110 0 0 00000 00
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
........ ......+.+++.+||+.+|++||+|.+++.
T Consensus 229 ~~~~~~~~-~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 229 NDSPTLSS-NDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred CCCCCCCc-hhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00000000 111222334778999999999999999986
No 308
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.94 E-value=8.5e-28 Score=267.40 Aligned_cols=242 Identities=21% Similarity=0.277 Sum_probs=167.9
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.++|+..+.||+|+||.||+|.... ..+.+.+|+.++++++||||+++++++.... .....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCce
Confidence 3688889999999999999886541 2346778999999999999999999876533 23456
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.++||||+. |+|.+++.... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGLS 158 (334)
T ss_pred EEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccceeec
Confidence 899999995 68988875332 2357899999999998 99999999999999999999999999998653
Q ss_pred cccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhhhcCCc----------------h-h
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVESNLPE----------------N-V 855 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~----------------~-~ 855 (929)
..... .........|+..|+|||++.+ ..++.++||||+|++++++.....++..... . .
T Consensus 159 ~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~ 236 (334)
T cd07855 159 SSPTE--HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVL 236 (334)
T ss_pred ccCcC--CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhh
Confidence 22111 1111233478999999998765 4589999999999988887655544321110 0 0
Q ss_pred hhccChHHHHhhcccchh-hhh---hhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 856 LQVLDPELRQLMTSNESQ-TIQ---LHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 856 ~~~~~~~l~~~~~~~~~~-~~~---~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
....+..+.......... ... .......-+.+++.+|++.+|++||+++|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 237 NRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 011111111110000000 000 00011223344777999999999999999876
No 309
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.94 E-value=6.9e-28 Score=257.84 Aligned_cols=223 Identities=26% Similarity=0.273 Sum_probs=164.5
Q ss_pred CCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
+|+..+.||+|+||.||+++... ..+.+.+|++++++++||||+++++++.. ....
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQD-----EENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcC-----CCeE
Confidence 47788999999999999987651 23578899999999999999999998853 3358
Q ss_pred EEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
++||||+++++|.+++.... .++.++++||+|||+. +++|+||||+||++++++.+||+|||.+.....
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 152 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTP 152 (258)
T ss_pred EEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCC
Confidence 99999999999999886441 2367899999999998 899999999999999999999999999876532
Q ss_pred ccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhc-ccchh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMT-SNESQ 873 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~ 873 (929)
.. ......|+..|+|||++.+..++.++||||+|++++++..+..++........ ..+..... .....
T Consensus 153 ~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~ 221 (258)
T cd05578 153 DT-------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIR----DQIRAKQETADVLY 221 (258)
T ss_pred Cc-------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHH----HHHHHHhccccccC
Confidence 11 12234688899999999988899999999999877776554444332221100 11111111 01111
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCH--HHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGI--REAL 907 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~--~ev~ 907 (929)
. ...+..+.+++.+||+.||++||++ +|+.
T Consensus 222 ~----~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 222 P----ATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred c----ccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 1 1122233347779999999999999 5543
No 310
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.94 E-value=2.7e-27 Score=267.15 Aligned_cols=241 Identities=22% Similarity=0.270 Sum_probs=177.6
Q ss_pred CChHHHHHhhCCCCCceeecccCceeEEecccc---------------CcHHHHHHHHHHHHcc-CCccccceeeecccC
Q 002376 651 ISYDELRRATGNFSHENLIGSGSFGSVLHNERT---------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSL 714 (929)
Q Consensus 651 ~~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~---------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~ 714 (929)
+.++.+...++-|.+.++||+|.+|+||+++.. ...++...|.++++.. +|||++.++|++.-.
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 345555667788999999999999999998765 2346777888888887 699999999999887
Q ss_pred CCCCcceEEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEe
Q 002376 715 DSKNMEFLALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVG 784 (929)
Q Consensus 715 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~ 784 (929)
+....+.+|+|||||.+||..|+++... .+..++++|+.+||.. .++|||||-.|||++.++.+|+.
T Consensus 89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLv 165 (953)
T KOG0587|consen 89 DPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLV 165 (953)
T ss_pred cCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEe
Confidence 7777788999999999999999887432 2356789999999998 89999999999999999999999
Q ss_pred ccccccccccccCCCCCccccceeccccccccccccCCC-----CCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhcc
Q 002376 785 DFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE-----RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVL 859 (929)
Q Consensus 785 DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~ 859 (929)
|||++..+.. .......++||+.|||||++... .|+.++|+||+|+++.|+.-+.-+....- ++..
T Consensus 166 DFGvSaQlds------T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmH-Pmra-- 236 (953)
T KOG0587|consen 166 DFGVSAQLDS------TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMH-PMRA-- 236 (953)
T ss_pred eeeeeeeeec------ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcc-hhhh--
Confidence 9999987742 22334557899999999998754 38899999999998888643332221110 0000
Q ss_pred ChHHHHhhcccchhhhhhhHH-HHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 860 DPELRQLMTSNESQTIQLHDC-LITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 860 ~~~l~~~~~~~~~~~~~~~~~-~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
+.. .+..+++....++. ..++.. ++..|+..|-++||++.++++
T Consensus 237 ---LF~-IpRNPPPkLkrp~kWs~~Fnd-FIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 237 ---LFL-IPRNPPPKLKRPKKWSKKFND-FISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ---hcc-CCCCCCccccchhhHHHHHHH-HHHHHHhhccccCcchhhhcc
Confidence 000 00011111110111 122333 777999999999999988764
No 311
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.94 E-value=6.8e-28 Score=267.02 Aligned_cols=165 Identities=30% Similarity=0.401 Sum_probs=137.1
Q ss_pred CCCCceeecccCceeEEeccccCc---------------HHHHHHHHHHHHccC-Cc-----cccceeeecccCCCCCcc
Q 002376 662 NFSHENLIGSGSFGSVLHNERTGS---------------WKSFIAECETLRNVR-HR-----NLVKLITSCSSLDSKNME 720 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~~---------------~~~~~~E~~~l~~l~-Hp-----niv~l~~~~~~~~~~~~~ 720 (929)
+|.+.++||+|+||.|.||++.++ ..+-..|+.+|..++ |. |+|++++||...+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~----- 261 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN----- 261 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc-----
Confidence 788899999999999999988742 234456999999996 43 7999999996544
Q ss_pred eEEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC--ceEEecccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM--TAKVGDFGL 788 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~--~~ki~DfGl 788 (929)
+.|||+|.++ .+|+++++..+ .++.||+.||.+||.. +|||+||||+|||+.+-. .+||+|||.
T Consensus 262 HlciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGS 337 (586)
T KOG0667|consen 262 HLCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGS 337 (586)
T ss_pred ceeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEeccc
Confidence 4899999995 59999998543 4578999999999998 999999999999997544 799999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchh
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIV 844 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~ 844 (929)
|....+. ....+-+..|+|||++.|.+|+.+.||||+||++.|+.++
T Consensus 338 Sc~~~q~---------vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG 384 (586)
T KOG0667|consen 338 SCFESQR---------VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTG 384 (586)
T ss_pred ccccCCc---------ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcC
Confidence 9865321 1134568899999999999999999999999999887655
No 312
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.94 E-value=1.1e-27 Score=260.22 Aligned_cols=226 Identities=24% Similarity=0.261 Sum_probs=163.4
Q ss_pred CCCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV 725 (929)
.|...+.||+|++|.||++.... ..+.+.+|+.+++.++||||+++++++... .+.++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~-----~~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVG-----DELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcC-----CeEEEE
Confidence 34456799999999999987541 234678999999999999999999988543 347999
Q ss_pred EEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 726 YEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
+||+++++|.+++...+ .++.+++.|++|||+. +++||||||+||++++++.+|++|||+++......
T Consensus 95 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~-- 169 (285)
T cd06648 95 MEFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV-- 169 (285)
T ss_pred EeccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCC--
Confidence 99999999999886532 2467899999999998 99999999999999999999999999987553211
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLH 878 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 878 (929)
.......|++.|+|||+..+..++.++||||+|++++++.....++.... ..+.. ..+... ........
T Consensus 170 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~--~~~~~-~~~~~~----~~~~~~~~ 238 (285)
T cd06648 170 ----PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP--PLQAM-KRIRDN----LPPKLKNL 238 (285)
T ss_pred ----cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC--HHHHH-HHHHhc----CCCCCccc
Confidence 11123468999999999998889999999999987777554433221111 00000 011110 00000000
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 879 DCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 879 ~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
......+.+++.+||+.+|++||++.|+++
T Consensus 239 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 239 HKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred ccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 001122334777999999999999999985
No 313
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.94 E-value=7.3e-28 Score=263.54 Aligned_cols=168 Identities=23% Similarity=0.361 Sum_probs=135.8
Q ss_pred CCCCceeecccCceeEEeccccC---------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG---------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~---------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
+|+..+.||+|+||.||+|.... ....+..|++++++++||||+++++++.+ ..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH-----KS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec-----CC
Confidence 47778899999999999987541 12346689999999999999999999854 34
Q ss_pred eEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..++||||+ +|+|.++++... .++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~ 151 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARS 151 (298)
T ss_pred EEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeee
Confidence 589999999 899999986433 2367899999999998 999999999999999999999999999986
Q ss_pred cccccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchh
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIV 844 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~ 844 (929)
..... .......+++.|+|||++.+ ..++.++||||+|++++++...
T Consensus 152 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g 199 (298)
T cd07841 152 FGSPN------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLR 199 (298)
T ss_pred ccCCC------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcC
Confidence 53211 11122356888999998865 4579999999999888776544
No 314
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.94 E-value=9.1e-28 Score=266.20 Aligned_cols=178 Identities=28% Similarity=0.346 Sum_probs=142.9
Q ss_pred CCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCC-CCcceEEEE
Q 002376 664 SHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS-KNMEFLALV 725 (929)
Q Consensus 664 ~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-~~~~~~~lV 725 (929)
...+.||+||||.||+|+.+. ..+...+|+++|++++|||||+++++=.+... --.....+|
T Consensus 16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv 95 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV 95 (732)
T ss_pred eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence 345789999999999999662 23456689999999999999999987533220 003457899
Q ss_pred EEecCCCCccccccccc-----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeec--CCC--ceEEecccccc
Q 002376 726 YEFLSNGSLGDWIHGER-----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLD--EEM--TAKVGDFGLAR 790 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~~~-----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~--~~~--~~ki~DfGla~ 790 (929)
||||++|||+..+.+.. ....+++.||.|||++ +|+||||||.||++- ++| ..||+|||.||
T Consensus 96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar 172 (732)
T KOG4250|consen 96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR 172 (732)
T ss_pred EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence 99999999999997422 1245788999999988 999999999999983 334 57999999999
Q ss_pred ccccccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhhhcC
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVESNL 851 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~~~~ 851 (929)
.+.+. .....++||..|.+||++.. +.|+..+|-||+|+++|+..++..++...
T Consensus 173 el~d~-------s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 173 ELDDN-------SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred cCCCC-------CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 77432 24566899999999999984 88999999999999999988888877544
No 315
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.94 E-value=1.5e-27 Score=260.67 Aligned_cols=238 Identities=21% Similarity=0.267 Sum_probs=163.2
Q ss_pred CCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccC-CccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||+|+||.||+|.... ..+.+.+|+.++++++ ||||+++++++...+......
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 468889999999999999987641 1246788999999995 699999999987654434445
Q ss_pred EEEEEEecCCCCccccccccc-------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC-CCceEEeccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER-------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE-EMTAKVGDFG 787 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~-------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~-~~~~ki~DfG 787 (929)
.|+||||+++ +|.+++.... .++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999985 8888765321 2357899999999998 9999999999999998 8899999999
Q ss_pred cccccccccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhcc----C
Q 002376 788 LARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQVL----D 860 (929)
Q Consensus 788 la~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~~----~ 860 (929)
+++...... .......+++.|+|||++.+ ..++.++||||+|++++++.....++....+ ...+++ +
T Consensus 157 ~~~~~~~~~------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~ 230 (295)
T cd07837 157 LGRAFSIPV------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGT 230 (295)
T ss_pred cceecCCCc------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCC
Confidence 988652210 11122357889999998865 4579999999999888876555443322211 000000 0
Q ss_pred hH------H-----HHhhcccchhhh-hhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 861 PE------L-----RQLMTSNESQTI-QLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 861 ~~------l-----~~~~~~~~~~~~-~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
+. . ............ .....+...+.+++.+|+++||++||+++|++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 231 PTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred CChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00 0 000000000000 000112222334888999999999999999874
No 316
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.94 E-value=2.5e-28 Score=240.28 Aligned_cols=222 Identities=22% Similarity=0.242 Sum_probs=151.7
Q ss_pred ceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccC-CccccceeeecccCCCCCcceEEEEEE
Q 002376 666 ENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNMEFLALVYE 727 (929)
Q Consensus 666 ~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~~~~~lV~e 727 (929)
...||.|+.|.|++++... ..+++.+.+.++.+.+ .|.||+.+|||..... +++.||
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~d-----V~IcMe 171 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTD-----VFICME 171 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCch-----HHHHHH
Confidence 4569999999999987662 2355667777766665 8999999999976433 788899
Q ss_pred ecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 728 FLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 728 ~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
.|. .-+...++.. .+....+..||.||...+ +|||||+||+|||+|+.|.+|+||||.+..+....
T Consensus 172 lMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk-- 246 (391)
T KOG0983|consen 172 LMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK-- 246 (391)
T ss_pred HHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeeccc--
Confidence 884 2333443321 123456789999999886 89999999999999999999999999998764221
Q ss_pred CCCccccceeccccccccccccCCC---CCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGE---RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTI 875 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 875 (929)
..+..+|-+.|||||-+.-. .|+.++||||+|+.++|+.++..++..-.-. .+++..-+ . ++++..
T Consensus 247 -----AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td-Fe~ltkvl----n-~ePP~L 315 (391)
T KOG0983|consen 247 -----AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD-FEVLTKVL----N-EEPPLL 315 (391)
T ss_pred -----ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc-HHHHHHHH----h-cCCCCC
Confidence 12334789999999988643 5999999999998777766555544331111 11111111 1 111111
Q ss_pred hhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 876 QLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 876 ~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
+.....+...++++..|+..|+.+||...++++
T Consensus 316 ~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 316 PGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred CcccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 111112222333666999999999999887654
No 317
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.94 E-value=9.3e-28 Score=260.56 Aligned_cols=226 Identities=19% Similarity=0.275 Sum_probs=157.1
Q ss_pred CCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHH-HHccCCccccceeeecccCCCCCcceE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECET-LRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~-l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
++|+..+.||+|+||.||+++... ...++..|+.. ++..+||||+++++++... ...
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~-----~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFRE-----GDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecC-----CcE
Confidence 468888999999999999987641 12345566665 5667899999999998643 348
Q ss_pred EEEEEecCCCCcccccccc------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGE------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
|+||||++ |+|.++++.. ..++.|++.|++|||+.+ +++||||||+||++++++.+||+|||+++
T Consensus 76 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~ 152 (283)
T cd06617 76 WICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISG 152 (283)
T ss_pred EEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccccc
Confidence 99999996 6887766421 123678999999999853 79999999999999999999999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCC----CCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHh
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLG----ERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQL 866 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 866 (929)
..... .......|+..|+|||++.+ ..++.++||||+|++++++.....++........ .+...
T Consensus 153 ~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-----~~~~~ 220 (283)
T cd06617 153 YLVDS-------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQ-----QLKQV 220 (283)
T ss_pred ccccc-------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHH-----HHHHH
Confidence 65321 11123468899999998865 4468999999999887776554443322211111 11111
Q ss_pred hcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 867 MTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
... ...... .+..+.-+.+++.+||+.+|++||++.++++
T Consensus 221 ~~~-~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 221 VEE-PSPQLP-AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred Hhc-CCCCCC-ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 100 000000 0112222333777999999999999999986
No 318
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.94 E-value=4.6e-28 Score=264.44 Aligned_cols=172 Identities=24% Similarity=0.333 Sum_probs=137.4
Q ss_pred CCCCCceeecccCceeEEeccccCc------------------HHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTGS------------------WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~~------------------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
++|+..+.||+|+||.||+|....+ ...+.+|+.++++++||||+++++++...+ ....
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~---~~~~ 81 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSN---LDKI 81 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC---CCcE
Confidence 5788889999999999999887521 224678999999999999999999986532 2458
Q ss_pred EEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
|+||||++ ++|.+++.... .++.||+.||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 82 ~lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 82 YMVMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred EEEehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 99999997 58888775322 3467899999999998 89999999999999999999999999998653
Q ss_pred cccCCCCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCcchhH
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEFNIVK 845 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~~~~~ 845 (929)
... .......+++.|+|||++.+.. ++.++||||+|++++++....
T Consensus 158 ~~~------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~ 204 (293)
T cd07843 158 SPL------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKK 204 (293)
T ss_pred CCc------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCC
Confidence 211 1112335788999999987654 689999999998877765543
No 319
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.94 E-value=2.3e-27 Score=254.55 Aligned_cols=231 Identities=26% Similarity=0.321 Sum_probs=165.5
Q ss_pred CCCCceeecccCceeEEecccc---------------C---cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERT---------------G---SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~---------------~---~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+|+..+.||+|+||.||+|... . ..+.+.+|+.++++++|+||+++++++... ...+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHR-----EKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecC-----CEEE
Confidence 4777899999999999998643 1 346788999999999999999999987543 3489
Q ss_pred EEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
+|+||+++++|.++++... .++.+++.|++|||+. +|+||||||+||++++++.+||+|||.+......
T Consensus 76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~ 152 (264)
T cd06626 76 IFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNN 152 (264)
T ss_pred EEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCC
Confidence 9999999999999986432 2357899999999998 8999999999999999999999999998865322
Q ss_pred cCCCCCccccceeccccccccccccCCCC---CCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGER---PSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
... .........++..|+|||++.+.. ++.++|||++|++++++.....++......... ..........
T Consensus 153 ~~~--~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~-----~~~~~~~~~~ 225 (264)
T cd06626 153 TTT--MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQI-----MFHVGAGHKP 225 (264)
T ss_pred CCc--ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHH-----HHHHhcCCCC
Confidence 111 001012346889999999998776 899999999998877765544433222111100 0000000000
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..+.. ......+.+++.+||+.+|++||++.|++.
T Consensus 226 ~~~~~-~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 226 PIPDS-LQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CCCcc-cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000 001222233777999999999999999864
No 320
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=6.7e-28 Score=255.17 Aligned_cols=221 Identities=23% Similarity=0.278 Sum_probs=168.3
Q ss_pred CCCCCceeecccCceeEEecccc------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
+-|+.++.||+|.|.+|-.+++. .....+.+|++-|+-++|||||++|++.- ....+
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViD-----TQTKl 92 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVID-----TQTKL 92 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhc-----ccceE
Confidence 45777889999999998665543 12345779999999999999999999973 33448
Q ss_pred EEEEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeec-CCCceEEecccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLD-EEMTAKVGDFGLARFL 792 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~-~~~~~ki~DfGla~~~ 792 (929)
|+|+|.-.+|+|+||+-++ +++..||..|+.|+|+. .+||||+||+||.+- .-|.+|+.|||++..+
T Consensus 93 yLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf 169 (864)
T KOG4717|consen 93 YLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKF 169 (864)
T ss_pred EEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccC
Confidence 9999999999999998632 35578999999999998 799999999999874 5679999999999765
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCC-CCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhccChHHHHhhcc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERP-STAGDVPTSESFAGEFNIVKWVESNLPE--NVLQVLDPELRQLMTS 869 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~ 869 (929)
.++ ......+|+..|-|||++.|..| .+++||||+|+++|-+.-+..++....+ .+..++|...
T Consensus 170 ~PG-------~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKY------ 236 (864)
T KOG4717|consen 170 QPG-------KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKY------ 236 (864)
T ss_pred CCc-------chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccc------
Confidence 332 33456799999999999999988 5788999999766554444444433322 2223333221
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..+.-+.+-.++++..|+.+||.+|.+.+||+.
T Consensus 237 ------tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 237 ------TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred ------cCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 122334555666888999999999999998864
No 321
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.94 E-value=1.3e-27 Score=266.22 Aligned_cols=245 Identities=24% Similarity=0.296 Sum_probs=169.4
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.++|...+.||+|+||.||+++... ..+.+.+|+.+++.++||||+++++++..........
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 3578889999999999999887531 2345778999999999999999999886544333345
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.|+||||+. ++|.+++.... .++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 159 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLARTTS 159 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccccccC
Confidence 899999995 68888775432 2367899999999998 99999999999999999999999999998653
Q ss_pred cccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhhhcCC-----------------chh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVESNLP-----------------ENV 855 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~-----------------~~~ 855 (929)
... .......|+..|+|||++.+ ..++.++||||+|++++++..+..++.... +..
T Consensus 160 ~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 233 (337)
T cd07858 160 EKG------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDL 233 (337)
T ss_pred CCc------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHh
Confidence 211 11223467899999998765 468999999999988877655443332110 001
Q ss_pred hhccChHHHHhhcc---cchhh-hhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH--HHhhH
Q 002376 856 LQVLDPELRQLMTS---NESQT-IQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR--LKSSQ 914 (929)
Q Consensus 856 ~~~~~~~l~~~~~~---~~~~~-~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~--L~~~~ 914 (929)
..+.+......... ..... ......+...+.+++.+|++.+|++|||++|+++. ++.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 234 GFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred hhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 11111111111000 00000 00000112223348889999999999999999865 65543
No 322
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.94 E-value=3.4e-27 Score=252.21 Aligned_cols=224 Identities=27% Similarity=0.320 Sum_probs=164.1
Q ss_pred CCCCceeecccCceeEEeccccC---------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG---------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~---------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
+|+..+.||+|+||+||+|.... ..+.+.+|++++++++||||+++++++... .
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREE-----D 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecC-----C
Confidence 36677899999999999987541 235688999999999999999999998543 3
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
..++||||+++++|.++++... .++.+++.|++|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~ 152 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQV 152 (258)
T ss_pred eEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceec
Confidence 4899999999999999886433 2356899999999998 9999999999999999999999999998765
Q ss_pred ccccCCCCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
.... ......|+..|+|||.+.... ++.++||||+|++++++.....++..... .... ..... .
T Consensus 153 ~~~~-------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~-~~~~-----~~~~~--~ 217 (258)
T cd06632 153 VEFS-------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG-VAAV-----FKIGR--S 217 (258)
T ss_pred cccc-------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH-HHHH-----HHHHh--c
Confidence 3211 122346889999999987776 89999999999877776554433322221 0000 00000 0
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
......++.....+++++.+||+.+|++||++.|++.
T Consensus 218 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 218 KELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 0000111112223334777999999999999999875
No 323
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.94 E-value=9.7e-28 Score=260.59 Aligned_cols=170 Identities=30% Similarity=0.410 Sum_probs=135.6
Q ss_pred CCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+|+..+.||+|+||.||+|+... ..+.+.+|++++++++||||+++++++... ...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-----NKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccC-----CcEE
Confidence 47788999999999999987541 124688999999999999999999998543 3489
Q ss_pred EEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
+||||++ ++|.+++.... .++.+++.|++|||+. +++||||||+||++++++.+|++|||+++...
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~ 151 (284)
T cd07860 76 LVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 151 (284)
T ss_pred EEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcc
Confidence 9999995 68888775321 2356899999999998 89999999999999999999999999987653
Q ss_pred cccCCCCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCcchhHH
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEFNIVKW 846 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~~~~~~ 846 (929)
... .......+++.|+|||++.+.. ++.++||||+|++++++.+...
T Consensus 152 ~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~ 199 (284)
T cd07860 152 VPV------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 199 (284)
T ss_pred cCc------cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 211 1112235788999999887655 6899999999988887655543
No 324
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.94 E-value=1.4e-28 Score=241.33 Aligned_cols=231 Identities=22% Similarity=0.265 Sum_probs=162.2
Q ss_pred CCChHHHHHhhCCCCCceeecccCceeEEecccc-----------------CcHHHHHHHHHHHH-ccCCccccceeeec
Q 002376 650 KISYDELRRATGNFSHENLIGSGSFGSVLHNERT-----------------GSWKSFIAECETLR-NVRHRNLVKLITSC 711 (929)
Q Consensus 650 ~~~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~-----------------~~~~~~~~E~~~l~-~l~Hpniv~l~~~~ 711 (929)
.|+-++++. ...||.|+||+|+|..++ ++.+++..|.++.. .-+.||||+++|.+
T Consensus 60 ~F~~~~Lqd-------lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~ 132 (361)
T KOG1006|consen 60 TFTSDNLQD-------LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGAL 132 (361)
T ss_pred ccccchHHH-------HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhh
Confidence 355455544 356999999999987665 34567888887644 45789999999999
Q ss_pred ccCCCCCcceEEEEEEecCCCCcccccc---c--c--------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC
Q 002376 712 SSLDSKNMEFLALVYEFLSNGSLGDWIH---G--E--------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE 778 (929)
Q Consensus 712 ~~~~~~~~~~~~lV~e~~~~gsL~~~l~---~--~--------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~ 778 (929)
+..+ ..|+.||.|. -|+..+.+ . . .++......||.||.... .|||||+||+|||+|..
T Consensus 133 F~EG-----dcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~ 204 (361)
T KOG1006|consen 133 FSEG-----DCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRH 204 (361)
T ss_pred hcCC-----ceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecC
Confidence 6544 3899999994 46655433 1 1 133455678999999865 89999999999999999
Q ss_pred CceEEeccccccccccccCCCCCccccceeccccccccccccCCC--CCCCCCCCCCCcCCCCCcchhHHhhhcCCchhh
Q 002376 779 MTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE--RPSTAGDVPTSESFAGEFNIVKWVESNLPENVL 856 (929)
Q Consensus 779 ~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~ 856 (929)
|.+|+||||.+..+... ...+..+|...|||||-+... .|+.++||||+|++++|+.++.++...+..
T Consensus 205 G~vKLCDFGIcGqLv~S-------iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--- 274 (361)
T KOG1006|consen 205 GDVKLCDFGICGQLVDS-------IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--- 274 (361)
T ss_pred CCEeeecccchHhHHHH-------HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH---
Confidence 99999999999876321 234456889999999988643 489999999999999998776666554443
Q ss_pred hccChHHHHhhcccchhhhhhhH---HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 857 QVLDPELRQLMTSNESQTIQLHD---CLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 857 ~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
++++ +......+++.-....+ .-.++++ .+.-|+-.|-.+||...++.+
T Consensus 275 -vfeq-l~~Vv~gdpp~l~~~~~~~~~s~~~~~-fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 275 -VFEQ-LCQVVIGDPPILLFDKECVHYSFSMVR-FINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred -HHHH-HHHHHcCCCCeecCcccccccCHHHHH-HHHHHhhcccccCcchhhhhc
Confidence 2221 11111111111111111 1123444 666999999999999988754
No 325
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.94 E-value=2.1e-27 Score=258.32 Aligned_cols=230 Identities=22% Similarity=0.271 Sum_probs=169.1
Q ss_pred HhhCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 658 RATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 658 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
..++.|+..+.||+|+||.||++.+.. ..+.+.+|++.+++++|||++++++++... ...
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~ 90 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVG-----DEL 90 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEEC-----CEE
Confidence 356678888999999999999987751 145788999999999999999999998653 358
Q ss_pred EEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
++|+||+++++|.+++.... .++.+++.||+|||+. +++|+|+||+||+++.++.+||+|||++....
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 167 (286)
T cd06614 91 WVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLT 167 (286)
T ss_pred EEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence 99999999999999987542 2367899999999997 99999999999999999999999999987543
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
... .......++..|+|||++.+..++.++||||+|++++++.....++..... . . .......... .
T Consensus 168 ~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~-~-~----~~~~~~~~~~-~ 234 (286)
T cd06614 168 KEK------SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP-L-R----ALFLITTKGI-P 234 (286)
T ss_pred cch------hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH-H-H----HHHHHHhcCC-C
Confidence 211 111233578899999999988899999999999887776544433322211 0 0 0000000000 0
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.....+.+...+++++.+|++.+|.+||++.++++
T Consensus 235 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 235 PLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred CCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 00001112223334777999999999999999975
No 326
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.94 E-value=1e-27 Score=267.15 Aligned_cols=181 Identities=28% Similarity=0.385 Sum_probs=141.2
Q ss_pred hhCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCCc
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~ 719 (929)
..++|+..+.||+|+||.||+|.+.. ..+.+.+|+.+++++ +||||++++++|...+ .
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~---~ 81 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEN---D 81 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCC---C
Confidence 34678888999999999999987541 123467899999999 9999999999985422 2
Q ss_pred ceEEEEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
...++||||++ ++|.++++... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 82 KDIYLVFEYME-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSL 157 (337)
T ss_pred ceEEEEecccc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence 35799999997 58988775421 2467899999999997 9999999999999999999999999999866
Q ss_pred ccccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHh
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWV 847 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~ 847 (929)
....... .........||..|+|||++.+ ..++.++||||+|++++++.....+
T Consensus 158 ~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~p 212 (337)
T cd07852 158 SELEENP-ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPL 212 (337)
T ss_pred ccccccc-cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCC
Confidence 4321110 1112334578999999998765 4578999999999888876655433
No 327
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.94 E-value=5.2e-27 Score=253.92 Aligned_cols=225 Identities=24% Similarity=0.294 Sum_probs=164.3
Q ss_pred CCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
-|+..+.||+|+||.||+|.... ..+.+.+|+.++++++||||+++++++... ...++
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~l 79 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD-----TKLWI 79 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeC-----CeEEE
Confidence 35677899999999999986531 124688899999999999999999998543 34899
Q ss_pred EEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 725 VYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
||||+++|+|.+++.... ..+.+++.|++|||+. +++|+||||+||+++.++.++|+|||+++.+....
T Consensus 80 v~e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06641 80 IMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ- 155 (277)
T ss_pred EEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccch-
Confidence 999999999999886422 3367899999999998 99999999999999999999999999987653211
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQL 877 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 877 (929)
.......|+..|+|||++.+..++.++||||+|++++++.+...++..... . .......... ....
T Consensus 156 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~--~-----~~~~~~~~~~--~~~~ 221 (277)
T cd06641 156 -----IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP--M-----KVLFLIPKNN--PPTL 221 (277)
T ss_pred -----hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch--H-----HHHHHHhcCC--CCCC
Confidence 111234688999999999888899999999999877776544333322111 0 0000000000 0001
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 878 HDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 878 ~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
......-+.+++.+||+.+|++||+|.++++.
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 222 EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 11112223347779999999999999999873
No 328
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.94 E-value=1.9e-27 Score=261.74 Aligned_cols=179 Identities=26% Similarity=0.386 Sum_probs=138.6
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCC---C
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSK---N 718 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~---~ 718 (929)
.++|+..+.||+|+||.||+|.... ....+.+|++++++++||||++++++|...+.. .
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 4578999999999999999987641 123456899999999999999999998654321 2
Q ss_pred cceEEEEEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
....++||||++ +++.+++... ..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 345799999996 5787766532 13367899999999998 9999999999999999999999999999
Q ss_pred cccccccCCCCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCcchh
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEFNIV 844 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~~~~ 844 (929)
+......... ........++..|+|||++.+.. ++.++||||+|++++++...
T Consensus 167 ~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~ 220 (310)
T cd07865 167 RAFSLSKNSK--PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTR 220 (310)
T ss_pred ccccCCcccC--CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhC
Confidence 8664321111 11122346788999999887654 78999999999888776443
No 329
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.94 E-value=1.6e-27 Score=279.05 Aligned_cols=177 Identities=21% Similarity=0.219 Sum_probs=122.9
Q ss_pred hhCCCCCceeecccCceeEEeccccCc----H---------HHHHHHHHHHHcc---CCccccceeeecccCC-CCCcce
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTGS----W---------KSFIAECETLRNV---RHRNLVKLITSCSSLD-SKNMEF 721 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~----~---------~~~~~E~~~l~~l---~Hpniv~l~~~~~~~~-~~~~~~ 721 (929)
..++|+..+.||+|+||.||+|++... . +.-..|+....++ .+.+++.+...+.... ......
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNERVRRACPNSCADFVYGFLEPVSSKKEDE 209 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHHHHhhchhhHHHHHHhhhcccccccCCc
Confidence 567899999999999999999987533 0 0111233333333 2333443333222111 123445
Q ss_pred EEEEEEecCCCCccccccccc----------------------------cccccHHHHHHHhhhCCCCCEEecCCCCCCe
Q 002376 722 LALVYEFLSNGSLGDWIHGER----------------------------KNELDITSALDYLHNDCEVPVVHSDLKPGNI 773 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~----------------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NI 773 (929)
.++||||+++++|.++++... .++.|++.||+|||+. +|+||||||+||
T Consensus 210 ~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP~NI 286 (566)
T PLN03225 210 YWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKPQNI 286 (566)
T ss_pred eEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCHHHE
Confidence 899999999999988875321 2456889999999998 999999999999
Q ss_pred eecC-CCceEEeccccccccccccCCCCCccccceeccccccccccccCCC----------------------CCCCCCC
Q 002376 774 LLDE-EMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE----------------------RPSTAGD 830 (929)
Q Consensus 774 Ll~~-~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~D 830 (929)
|+++ ++.+||+|||+|+.+.... ......+.||+.|||||.+... .++.++|
T Consensus 287 Ll~~~~~~~KL~DFGlA~~l~~~~-----~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 287 IFSEGSGSFKIIDLGAAADLRVGI-----NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred EEeCCCCcEEEEeCCCcccccccc-----ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 9985 6799999999998653221 1122446789999999965322 2345679
Q ss_pred CCCCcCCCCCcch
Q 002376 831 VPTSESFAGEFNI 843 (929)
Q Consensus 831 V~s~g~~~~~~~~ 843 (929)
|||+||+++++..
T Consensus 362 VwSlGviL~el~~ 374 (566)
T PLN03225 362 IYSAGLIFLQMAF 374 (566)
T ss_pred cHHHHHHHHHHHh
Confidence 9999998887654
No 330
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.94 E-value=6.4e-27 Score=255.12 Aligned_cols=172 Identities=26% Similarity=0.353 Sum_probs=136.7
Q ss_pred CCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
++|+..+.||+|+||.||+|.... ....+.+|++++++++||||+++++++.+. ...+
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 79 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTK-----KTLT 79 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecC-----CeEE
Confidence 578889999999999999987641 123567899999999999999999998543 3589
Q ss_pred EEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
+||||++ ++|.+++.... ..+.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 80 lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 155 (291)
T cd07844 80 LVFEYLD-TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSV 155 (291)
T ss_pred EEEecCC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCC
Confidence 9999997 58988875322 2256899999999998 999999999999999999999999999875321
Q ss_pred ccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWV 847 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~ 847 (929)
. ........++..|+|||++.+ ..++.++||||+|++++++.....+
T Consensus 156 ~------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~ 203 (291)
T cd07844 156 P------SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPL 203 (291)
T ss_pred C------CccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCC
Confidence 1 011122356889999999876 4589999999999888876554433
No 331
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.94 E-value=8.1e-27 Score=249.25 Aligned_cols=225 Identities=24% Similarity=0.358 Sum_probs=162.5
Q ss_pred CCceeecccCceeEEeccccC---------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 664 SHENLIGSGSFGSVLHNERTG---------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 664 ~~~~~iG~G~~g~Vy~~~~~~---------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
+..+.||+|+||.||+++... ..+.+.+|++.++.++||||+++++++.+. ...
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~ 76 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE-----EPL 76 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCC-----Cee
Confidence 456889999999999876642 345788999999999999999999998653 348
Q ss_pred EEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
++||||+++++|.+++.... .++.|++.|++|||+. +++||||||+||++++++.+|++|||+++..
T Consensus 77 ~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~ 153 (258)
T smart00219 77 MIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDL 153 (258)
T ss_pred EEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceec
Confidence 99999999999999886432 2356899999999998 9999999999999999999999999999866
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
....... .....+++.|+|||.+.+..++.++|||++|++++++.. ...++.... . ..+........
T Consensus 154 ~~~~~~~-----~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~--~-----~~~~~~~~~~~ 221 (258)
T smart00219 154 YDDDYYK-----KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS--N-----EEVLEYLKKGY 221 (258)
T ss_pred ccccccc-----cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--H-----HHHHHHHhcCC
Confidence 4321111 111236789999999988889999999999987776533 111111111 0 11111000000
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRL 910 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L 910 (929)
.. ........-+.+++.+|+..||++|||+.|+++.|
T Consensus 222 ~~--~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 222 RL--PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CC--CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 00 00011122233377799999999999999998764
No 332
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.94 E-value=5.3e-27 Score=250.68 Aligned_cols=224 Identities=23% Similarity=0.284 Sum_probs=163.1
Q ss_pred CCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+|+..+.||+|+||.||++.... ..+.+.+|++++++++||||+++++++... ...+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~-----~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQEN-----GRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccC-----CeEE
Confidence 47778999999999999987641 234678999999999999999999988543 3589
Q ss_pred EEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC-ceEEecccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM-TAKVGDFGLARFL 792 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~-~~ki~DfGla~~~ 792 (929)
+|+||+++++|.+++.... .++.+++.|++|||+. +++|||+||+||++++++ .+|++|||.+...
T Consensus 76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~ 152 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQL 152 (257)
T ss_pred EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhc
Confidence 9999999999999886422 2356899999999998 899999999999999886 5699999998865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
.... .......|++.|+|||+..+..++.++||||+|++++++.....++.... ..+.+......... .
T Consensus 153 ~~~~------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~---~ 221 (257)
T cd08225 153 NDSM------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN--LHQLVLKICQGYFA---P 221 (257)
T ss_pred cCCc------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHhcccCC---C
Confidence 3211 11122468999999999988889999999999988777654443332111 11111000000000 0
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.... ...-+++++.+|++.+|++|||+.|+++
T Consensus 222 ~~~~----~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 222 ISPN----FSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred CCCC----CCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 0011 1122333777999999999999999975
No 333
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.94 E-value=1.7e-27 Score=257.76 Aligned_cols=225 Identities=22% Similarity=0.316 Sum_probs=161.9
Q ss_pred CCCCceeecccCceeEEecccc-----------------CcHHHHHHHHHHHHccC---CccccceeeecccCCCCCcce
Q 002376 662 NFSHENLIGSGSFGSVLHNERT-----------------GSWKSFIAECETLRNVR---HRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~-----------------~~~~~~~~E~~~l~~l~---Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.|+..+.||+|+||.||+|... ...+++.+|++++++++ |||++++++++.. ...
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~-----~~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK-----GPR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-----CCE
Confidence 4677789999999999998753 12346888999999997 9999999999854 235
Q ss_pred EEEEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
.++||||+++++|.++++... .++.+++.|++|||+. +|+||||+|+||++++++.++++|||.+.....
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ 153 (277)
T ss_pred EEEEEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence 899999999999999886432 2356899999999998 999999999999999999999999999986642
Q ss_pred ccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
.. .......|+..|+|||++.++ .++.++||||+|++++++..+..++..... .+... ........
T Consensus 154 ~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~--~~~~~-----~~~~~~~~ 220 (277)
T cd06917 154 NS------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA--FRAMM-----LIPKSKPP 220 (277)
T ss_pred Cc------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh--hhhhh-----ccccCCCC
Confidence 21 112234689999999988754 479999999999877776544433322111 00000 00000000
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.... +.....+.+++.+||+.||++||++.|++.
T Consensus 221 ~~~~-~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 221 RLED-NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred CCCc-ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 0000 001122334778999999999999999975
No 334
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.94 E-value=2.7e-27 Score=264.10 Aligned_cols=250 Identities=22% Similarity=0.278 Sum_probs=170.5
Q ss_pred hHHHHHh----hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeee
Q 002376 653 YDELRRA----TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITS 710 (929)
Q Consensus 653 ~~~l~~~----~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~ 710 (929)
.+|+.++ .++|...+.||+|+||.||+|.... ..+.+.+|++++++++||||++++++
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~ 82 (342)
T cd07879 3 REEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDV 82 (342)
T ss_pred hhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhhe
Confidence 3455544 3789999999999999999987531 12357789999999999999999999
Q ss_pred cccCCC-CCcceEEEEEEecCCCCccccccc------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEE
Q 002376 711 CSSLDS-KNMEFLALVYEFLSNGSLGDWIHG------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKV 783 (929)
Q Consensus 711 ~~~~~~-~~~~~~~lV~e~~~~gsL~~~l~~------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki 783 (929)
+..... ......++|+||+. +++.++... ...++.|++.||+|||+. +|+||||||+||+++.++.+|+
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL 158 (342)
T cd07879 83 FTSAVSGDEFQDFYLVMPYMQ-TDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKI 158 (342)
T ss_pred ecccccCCCCceEEEEecccc-cCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEE
Confidence 865332 12234699999996 467665431 123467899999999998 8999999999999999999999
Q ss_pred eccccccccccccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhcc-
Q 002376 784 GDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQVL- 859 (929)
Q Consensus 784 ~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~~- 859 (929)
+|||+++.... ......|+..|+|||++.+ ..++.++||||+|++++++..+..++..... .+..++
T Consensus 159 ~dfg~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~ 229 (342)
T cd07879 159 LDFGLARHADA---------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK 229 (342)
T ss_pred eeCCCCcCCCC---------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 99999875421 1123467889999999876 4589999999999988886655544332111 000000
Q ss_pred -----ChHHHH---------hhcccch-hhhhh----hHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHHhhHHH
Q 002376 860 -----DPELRQ---------LMTSNES-QTIQL----HDCLITIIGSVGLSCTTESPGGRIGIREALR--RLKSSQEI 916 (929)
Q Consensus 860 -----~~~l~~---------~~~~~~~-~~~~~----~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~--~L~~~~~~ 916 (929)
.+.... ....... ..... +..-..+. +++.+||+.||++||+++|++. .+++.++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 230 VTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAV-DLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred hcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHH-HHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 000000 0000000 00000 00111233 4888999999999999999984 47776553
No 335
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.94 E-value=1.2e-27 Score=260.48 Aligned_cols=228 Identities=20% Similarity=0.221 Sum_probs=155.4
Q ss_pred CCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccC-CccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+|...+.||+|+||.||++.... ....+.+|+.++.++. ||||+++++++... ...+
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~-----~~~~ 79 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE-----GDCW 79 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC-----CcEE
Confidence 34456789999999999877641 2346788999999996 99999999988643 3379
Q ss_pred EEEEecCCCCccccc---cc----------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 724 LVYEFLSNGSLGDWI---HG----------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 724 lV~e~~~~gsL~~~l---~~----------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
+||||++. ++.++. .. ...++.+++.||+|||+.. +++||||||+||+++.++.+||+|||+++
T Consensus 80 ~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 156 (288)
T cd06616 80 ICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISG 156 (288)
T ss_pred EEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhH
Confidence 99999864 544432 11 1234678999999999742 89999999999999999999999999997
Q ss_pred ccccccCCCCCccccceeccccccccccccCCC---CCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhh
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE---RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLM 867 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 867 (929)
..... .......|++.|+|||++.+. .++.++||||+|++++++..+..++..... ..+ .+....
T Consensus 157 ~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~~----~~~~~~ 224 (288)
T cd06616 157 QLVDS-------IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-VFD----QLTQVV 224 (288)
T ss_pred HhccC-------CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-HHH----HHhhhc
Confidence 65321 111233688999999998876 689999999999877775444333322211 000 111110
Q ss_pred cccc-hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 868 TSNE-SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 868 ~~~~-~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
.... .........+...+.+++.+||+.+|++|||++||+..
T Consensus 225 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 225 KGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 00000000122223337889999999999999998763
No 336
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.94 E-value=3.9e-27 Score=252.74 Aligned_cols=229 Identities=23% Similarity=0.364 Sum_probs=169.4
Q ss_pred CCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
++|+..+.||+|++|.||++.... ..+.+.+|++.+++++|||++++++++... ...+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKE-----GEIS 75 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccC-----CeEE
Confidence 367888999999999999987652 246788999999999999999999998643 4589
Q ss_pred EEEEecCCCCccccccccc--------cccccHHHHHHHhhh-CCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHN-DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~-~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
+||||+++++|.+++.... .++.|+++|++|||+ . +++||||+|+||+++.++.+|++|||.++....
T Consensus 76 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~ 152 (264)
T cd06623 76 IVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLEN 152 (264)
T ss_pred EEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 9999999999999986422 346789999999999 7 999999999999999999999999999986532
Q ss_pred ccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhcccchh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~ 873 (929)
... ......++..|+|||.+.+..++.++|||++|++++++.+...++..... ...+...... .....
T Consensus 153 ~~~------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-----~~~~~ 221 (264)
T cd06623 153 TLD------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC-----DGPPP 221 (264)
T ss_pred CCC------cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh-----cCCCC
Confidence 211 11234688999999999999999999999999888776655544433321 1111111100 00000
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
... ....+..+.+++.+|++.+|++||++.|+++.
T Consensus 222 ~~~-~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 222 SLP-AEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCC-cccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 000 01011223337779999999999999999863
No 337
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.94 E-value=2.5e-27 Score=257.90 Aligned_cols=232 Identities=23% Similarity=0.248 Sum_probs=165.7
Q ss_pred CCCCceeecccCceeEEecccc-----------------------CcHHHHHHHHHHHHcc-CCccccceeeecccCCCC
Q 002376 662 NFSHENLIGSGSFGSVLHNERT-----------------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSLDSK 717 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~-----------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~ 717 (929)
+|+..+.||+|+||.||+++.. ...+.+.+|++++.++ +||||+++++++..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~---- 76 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT---- 76 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeec----
Confidence 3677899999999999987532 0124577899999999 59999999988743
Q ss_pred CcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 718 NMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 718 ~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
....++||||+++|+|.+++.... .++.|+++||+|||+. +++||||||+||++++++.+|++|||++
T Consensus 77 -~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~ 152 (288)
T cd05583 77 -DTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLS 152 (288)
T ss_pred -CCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccc
Confidence 234799999999999998876432 2356899999999997 9999999999999999999999999998
Q ss_pred cccccccCCCCCccccceeccccccccccccCCCC--CCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHh
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER--PSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQL 866 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~ 866 (929)
+....... .......|+..|+|||.+.+.. .+.++||||+|++++++.....++..... .....+......
T Consensus 153 ~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~- 226 (288)
T cd05583 153 KEFLAEEE-----ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK- 226 (288)
T ss_pred cccccccc-----cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc-
Confidence 86532211 1112346899999999987765 78999999999887776555444321111 000001111111
Q ss_pred hcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 867 MTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
.... .+..+...+++++.+||+.||++|||+++|.+.|+..
T Consensus 227 --~~~~----~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 227 --SKPP----FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred --cCCC----CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 1111 1111222334477799999999999999888776653
No 338
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.94 E-value=1.7e-27 Score=257.89 Aligned_cols=219 Identities=21% Similarity=0.252 Sum_probs=151.3
Q ss_pred eecccCceeEEeccccC-------------------cHHHHHHHHHHHHc---cCCccccceeeecccCCCCCcceEEEE
Q 002376 668 LIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRN---VRHRNLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 668 ~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~---l~Hpniv~l~~~~~~~~~~~~~~~~lV 725 (929)
.||+|+||.||++.... ..+.+.+|..+++. .+||||+.+++++... +..++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTP-----DKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecC-----CeEEEE
Confidence 48999999999877541 01234445444433 4799999999988543 348999
Q ss_pred EEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 726 YEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
|||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||++++++.+|++|||+++.....
T Consensus 76 ~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~-- 150 (279)
T cd05633 76 LDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-- 150 (279)
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceecccc--
Confidence 99999999998876432 3467899999999998 8999999999999999999999999998754211
Q ss_pred CCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQ 876 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 876 (929)
......||..|+|||.+.+ ..++.++||||+|++++++.+...++........+ .+..... .....
T Consensus 151 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~----~~~~~~~---~~~~~ 217 (279)
T cd05633 151 ------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH----EIDRMTL---TVNVE 217 (279)
T ss_pred ------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH----HHHHHhh---cCCcC
Confidence 1122368999999999864 56899999999998887765544443322111101 1111000 00001
Q ss_pred hhHHHHHHHHHHhccccCCCCCCCC-----CHHHHHHH
Q 002376 877 LHDCLITIIGSVGLSCTTESPGGRI-----GIREALRR 909 (929)
Q Consensus 877 ~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~~ 909 (929)
.++....-+.+++.+|++.||++|| +++|+++.
T Consensus 218 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 218 LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 1111222233367799999999999 59988773
No 339
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=9.8e-28 Score=249.63 Aligned_cols=236 Identities=22% Similarity=0.253 Sum_probs=170.4
Q ss_pred CCCCCceeecccCceeEEecccc--------------C---------cHHHHHHHHHHHHccCCccccceeeecccCCCC
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT--------------G---------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSK 717 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~--------------~---------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 717 (929)
++|-..+++|+|||++||++-+- + ..+...+|.++-+.++||.||++++|+.-...
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd- 541 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD- 541 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc-
Confidence 45667789999999999987653 1 12456789999999999999999999965332
Q ss_pred CcceEEEEEEecCCCCcccccccc--------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeec---CCCceEEecc
Q 002376 718 NMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLD---EEMTAKVGDF 786 (929)
Q Consensus 718 ~~~~~~lV~e~~~~gsL~~~l~~~--------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~---~~~~~ki~Df 786 (929)
.+|-|+|||+|.+|.-|++.. |.+..||..||.||... .++|||-|+||.|||+. ..|.+||.||
T Consensus 542 ---sFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 542 ---SFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred ---cceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeec
Confidence 379999999999999999743 45578999999999987 67999999999999995 4578999999
Q ss_pred ccccccccccCCCC-CccccceeccccccccccccCCC----CCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccCh
Q 002376 787 GLARFLLERVDNQS-SISSTHVFMGSIGYVPPEYGLGE----RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDP 861 (929)
Q Consensus 787 Gla~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (929)
|+++.+..+..... ....+...+||.+|++||.+.-+ +++.|+||||.|++.|....+.-+++.-.. ..+++..
T Consensus 618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs-QQdILqe 696 (775)
T KOG1151|consen 618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS-QQDILQE 696 (775)
T ss_pred chhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh-HHHHHhh
Confidence 99999865433322 22334567899999999977644 479999999999988887666555554322 1111111
Q ss_pred H--HHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHH
Q 002376 862 E--LRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREAL 907 (929)
Q Consensus 862 ~--l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~ 907 (929)
. +...-...+ ..+ -+....++++++|++..-++|....++.
T Consensus 697 NTIlkAtEVqFP-~KP----vVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 697 NTILKATEVQFP-PKP----VVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred hchhcceeccCC-CCC----ccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 1 111000000 111 1222233477799999999998877664
No 340
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.94 E-value=4.5e-27 Score=252.17 Aligned_cols=219 Identities=22% Similarity=0.315 Sum_probs=158.5
Q ss_pred ecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEec
Q 002376 669 IGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFL 729 (929)
Q Consensus 669 iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~ 729 (929)
||+|+||.||+++... ..+.+.+|++++++++||||+++++++.+. ...++||||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDK-----KYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcC-----CccEEEEecC
Confidence 6999999999987751 134688899999999999999999988543 3479999999
Q ss_pred CCCCcccccccccc--------ccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCC
Q 002376 730 SNGSLGDWIHGERK--------NELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSS 801 (929)
Q Consensus 730 ~~gsL~~~l~~~~~--------~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 801 (929)
++|+|.++++.... .+.+++.||+|+|+. +++|+||||+||+++.++.+|++|||+++......
T Consensus 76 ~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~----- 147 (262)
T cd05572 76 LGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ----- 147 (262)
T ss_pred CCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-----
Confidence 99999999875432 356899999999997 99999999999999999999999999998663221
Q ss_pred ccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHHH
Q 002376 802 ISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCL 881 (929)
Q Consensus 802 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 881 (929)
......|+..|+|||++.+..++.++|||++|+++|++.....++....+...+.. ...... ......+...
T Consensus 148 --~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~ 219 (262)
T cd05572 148 --KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIY----NDILKG--NGKLEFPNYI 219 (262)
T ss_pred --ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHH----HHHhcc--CCCCCCCccc
Confidence 12234688999999999888899999999999887776554444332221011111 111100 0000111111
Q ss_pred HHHHHHHhccccCCCCCCCCC-----HHHHHH
Q 002376 882 ITIIGSVGLSCTTESPGGRIG-----IREALR 908 (929)
Q Consensus 882 ~~~~~~l~~~Cl~~dP~~RPs-----~~ev~~ 908 (929)
..-+.+++.+||+.+|++||+ ++|+++
T Consensus 220 ~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 220 DKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 222334777999999999999 555543
No 341
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.94 E-value=1.7e-27 Score=258.84 Aligned_cols=169 Identities=24% Similarity=0.344 Sum_probs=137.6
Q ss_pred CCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+|+..+.||+|+||.||+|++.. ..+.+.+|+.++++++||||+++++++.. ....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH-----GSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec-----CCeeE
Confidence 47788999999999999987541 13578899999999999999999999854 33589
Q ss_pred EEEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
+||||+ +++|.+++... +.++.||+.||+|||+. +++|+||||+||++++++.+|++|||+++....
T Consensus 76 ~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~ 151 (286)
T cd07832 76 LVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSE 151 (286)
T ss_pred EEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccC
Confidence 999999 99999987532 23367899999999998 999999999999999999999999999986532
Q ss_pred ccCCCCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCcchh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEFNIV 844 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~~~~ 844 (929)
... .......|+..|+|||++.+.. ++.++||||+|++++++...
T Consensus 152 ~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg 197 (286)
T cd07832 152 EEP-----RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNG 197 (286)
T ss_pred CCC-----CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcC
Confidence 211 1122346899999999987654 68999999999888776554
No 342
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.94 E-value=2.3e-26 Score=236.84 Aligned_cols=245 Identities=19% Similarity=0.201 Sum_probs=187.0
Q ss_pred HHHHHhhCCCCCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHccCCccccceeeec
Q 002376 654 DELRRATGNFSHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVRHRNLVKLITSC 711 (929)
Q Consensus 654 ~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~ 711 (929)
+|+.....+++...++-+|.||.||+|.+.. +...|..|...+..+.|||+.++.+++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 4555556678888899999999999996541 123466788888888999999999999
Q ss_pred ccCCCCCcceEEEEEEecCCCCccccccccc----------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeee
Q 002376 712 SSLDSKNMEFLALVYEFLSNGSLGDWIHGER----------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILL 775 (929)
Q Consensus 712 ~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl 775 (929)
.+.. ...+++|.++.-|+|..++...| ..+.|++.|++|||.+ +|||.||.++|.+|
T Consensus 357 ie~~----~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvI 429 (563)
T KOG1024|consen 357 IEDY----ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVI 429 (563)
T ss_pred eecc----CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhccee
Confidence 7633 34789999999999999997322 1256899999999998 99999999999999
Q ss_pred cCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchh
Q 002376 776 DEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENV 855 (929)
Q Consensus 776 ~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~ 855 (929)
|+..++|++|=.++|.+.+.+-.-- ....-....||+||.+....|+.++||||||+.+||+.+ -+..|
T Consensus 430 dd~LqVkltDsaLSRDLFP~DYhcL----GDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmt----lg~~P--- 498 (563)
T KOG1024|consen 430 DDQLQVKLTDSALSRDLFPGDYHCL----GDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMT----LGKLP--- 498 (563)
T ss_pred hhheeEEeccchhccccCccccccc----CCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHh----cCCCC---
Confidence 9999999999999998754322110 011123568999999999999999999999988777432 11222
Q ss_pred hhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 856 LQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 856 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
..-+||.-...+-+++..-.+...|..++.. ++..||+.+|++||++++++.-|.+...+.
T Consensus 499 yaeIDPfEm~~ylkdGyRlaQP~NCPDeLf~-vMacCWallpeeRPsf~Qlv~cLseF~~ql 559 (563)
T KOG1024|consen 499 YAEIDPFEMEHYLKDGYRLAQPFNCPDELFT-VMACCWALLPEERPSFSQLVICLSEFHTQL 559 (563)
T ss_pred ccccCHHHHHHHHhccceecCCCCCcHHHHH-HHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence 2234554444444444444455577778888 999999999999999999999999877654
No 343
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.93 E-value=3.4e-27 Score=256.14 Aligned_cols=168 Identities=29% Similarity=0.408 Sum_probs=134.6
Q ss_pred CCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 663 FSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
|+..+.||+|++|.||+|.... ..+.+.+|++++++++|||++++++++.+. ...++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~-----~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSE-----NKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccC-----CeEEE
Confidence 5667899999999999987541 124688999999999999999999998543 45899
Q ss_pred EEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
||||++ ++|.+++.... .++.|+++||+|||+. +++||||+|+||++++++.+||+|||+++....
T Consensus 76 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~ 151 (283)
T cd07835 76 VFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGV 151 (283)
T ss_pred EEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCC
Confidence 999995 68998876433 2357899999999997 999999999999999999999999999976532
Q ss_pred ccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhH
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVK 845 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~ 845 (929)
.. .......++..|+|||++.+. .++.++||||+|++++++....
T Consensus 152 ~~------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~ 197 (283)
T cd07835 152 PV------RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRR 197 (283)
T ss_pred Cc------cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCC
Confidence 11 111223568899999988665 4799999999998887765544
No 344
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.93 E-value=1.1e-26 Score=252.50 Aligned_cols=235 Identities=23% Similarity=0.289 Sum_probs=162.1
Q ss_pred CCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHcc---CCccccceeeecccCCCCCcce
Q 002376 663 FSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNV---RHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l---~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
|+..+.||+|+||.||+|+... ....+.+|+.+++++ +|||++++++++...+......
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 5677899999999999998651 123466788777666 5999999999997655433345
Q ss_pred EEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
.++||||++ ++|.+++.... .++.|++.||+|||+. +++|+|+||+||++++++.+||+|||.++.
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCccee
Confidence 899999996 58888775321 2367899999999998 899999999999999999999999999986
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhccChH----H--
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQVLDPE----L-- 863 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~----l-- 863 (929)
.... .......++..|+|||++.+..++.++||||+|++++++.....++..... ....+.+.. .
T Consensus 157 ~~~~-------~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07838 157 YSFE-------MALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEE 229 (287)
T ss_pred ccCC-------cccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHh
Confidence 5321 111223578899999999999999999999999888876544333221111 011111000 0
Q ss_pred --------HHhhcccchhh-hhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 864 --------RQLMTSNESQT-IQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 864 --------~~~~~~~~~~~-~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
........... ......+...+.+++.+||+.||++||+++|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 230 WPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00000000000 0000112233344888999999999999999874
No 345
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.93 E-value=7.7e-27 Score=259.48 Aligned_cols=177 Identities=27% Similarity=0.355 Sum_probs=136.8
Q ss_pred CCCCceeecccCceeEEeccccCc--------------------HHHHHHHHHHHHcc-CCccccceeeecccCCCCCcc
Q 002376 662 NFSHENLIGSGSFGSVLHNERTGS--------------------WKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~~--------------------~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~ 720 (929)
+|+..+.||+|+||.||+++.... .+.+.+|+++++++ +||||+++++++.... ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP-GNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc-ccCC
Confidence 477789999999999999886522 24577899999999 5999999998764322 2233
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
..++++||++ ++|.+++.... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARGF 155 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence 4789999986 68988875332 3467899999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhH
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVK 845 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~ 845 (929)
...... .........||..|+|||++.+ ..++.++||||+|++++++....
T Consensus 156 ~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~ 207 (332)
T cd07857 156 SENPGE--NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRK 207 (332)
T ss_pred cccccc--ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 432111 1111234578999999998766 46899999999998877764443
No 346
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.93 E-value=2.9e-27 Score=260.37 Aligned_cols=183 Identities=25% Similarity=0.359 Sum_probs=140.5
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCC---CC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS---KN 718 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~---~~ 718 (929)
.++|+..+.||+|+||.||+|.... ....+.+|++++++++||||+++++++.+... ..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 5689999999999999999987641 12357789999999999999999998765432 12
Q ss_pred cceEEEEEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
....++||||+++ ++...+... ..++.|+++||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 162 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGLA 162 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCccc
Confidence 3457999999964 666655422 13467899999999998 9999999999999999999999999999
Q ss_pred cccccccCCCC-----CccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHH
Q 002376 790 RFLLERVDNQS-----SISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKW 846 (929)
Q Consensus 790 ~~~~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~ 846 (929)
+.......... .........|++.|+|||++.+. .++.++||||+|++++++.++..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~ 225 (311)
T cd07866 163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRP 225 (311)
T ss_pred hhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCC
Confidence 86543221111 11112345678999999987654 58999999999998888765543
No 347
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.93 E-value=3.7e-27 Score=256.82 Aligned_cols=221 Identities=23% Similarity=0.259 Sum_probs=159.9
Q ss_pred eeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEecC
Q 002376 667 NLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLS 730 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~ 730 (929)
.+||+|+||.||++.... ..+.+.+|+.+++.++|||++++++++... ...++||||++
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e~~~ 100 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-----DELWVVMEFLE 100 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeC-----CEEEEEEecCC
Confidence 579999999999886641 234688899999999999999999998543 34899999999
Q ss_pred CCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCCcc
Q 002376 731 NGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSIS 803 (929)
Q Consensus 731 ~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 803 (929)
+++|.+++...+ .++.|++.|++|||+. +++||||||+||++++++.++|+|||++....... .
T Consensus 101 ~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~------~ 171 (292)
T cd06657 101 GGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV------P 171 (292)
T ss_pred CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccc------c
Confidence 999998875322 3467899999999998 99999999999999999999999999987553211 1
Q ss_pred ccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHHHHH
Q 002376 804 STHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLIT 883 (929)
Q Consensus 804 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 883 (929)
......|+++|+|||++.+..++.++||||+|++++++.+...++..... .+.+ ..+....+........ ...
T Consensus 172 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--~~~~-~~~~~~~~~~~~~~~~----~~~ 244 (292)
T cd06657 172 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAM-KMIRDNLPPKLKNLHK----VSP 244 (292)
T ss_pred cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHH-HHHHhhCCcccCCccc----CCH
Confidence 12234689999999999888899999999999877775543333221111 0000 0111111110000001 111
Q ss_pred HHHHHhccccCCCCCCCCCHHHHHH
Q 002376 884 IIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 884 ~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.+.+++.+||+.+|++||++.|+++
T Consensus 245 ~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 245 SLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHHHHHhCCcccCcCHHHHhc
Confidence 2233777999999999999999887
No 348
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.93 E-value=6.1e-27 Score=258.49 Aligned_cols=220 Identities=25% Similarity=0.333 Sum_probs=157.6
Q ss_pred CCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 663 FSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
|+..+.||+|+||.||+++... ..+.+.+|++++++++|||++++++++.+.. ..+
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 101 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREH-----TAW 101 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC-----eEE
Confidence 5667889999999999987531 1246888999999999999999999986533 479
Q ss_pred EEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
+||||++ |++.+.+.... .++.+++.|+.|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 102 lv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (317)
T cd06635 102 LVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASP 177 (317)
T ss_pred EEEeCCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCC
Confidence 9999996 57777664211 2357899999999998 999999999999999999999999999875421
Q ss_pred ccCCCCCccccceeccccccccccccC---CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGL---GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
.....|++.|+|||++. .+.++.++||||+|++++++.....++..... .+. .........
T Consensus 178 ----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--~~~----~~~~~~~~~ 241 (317)
T cd06635 178 ----------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MSA----LYHIAQNES 241 (317)
T ss_pred ----------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH--HHH----HHHHHhccC
Confidence 12346889999999974 45689999999999877765443322211110 000 011000000
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
... ..+.....+++++.+||+.+|++||++.|+++.
T Consensus 242 -~~~-~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 277 (317)
T cd06635 242 -PTL-QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKH 277 (317)
T ss_pred -CCC-CCccccHHHHHHHHHHccCCcccCcCHHHHHhC
Confidence 000 011122334458889999999999999999874
No 349
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.93 E-value=2.2e-26 Score=247.14 Aligned_cols=230 Identities=22% Similarity=0.263 Sum_probs=166.0
Q ss_pred CCCCCceeecccCceeEEeccccC---------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG---------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~---------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
.+|+..+.||+|+||.||+|.... ..+.+.+|++++++++||||+++++++.+.+ .
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~---~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPE---E 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCC---C
Confidence 468889999999999999986531 1246788999999999999999999885432 2
Q ss_pred ceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
...++||||+++++|.+++.... .++.+++.|++|||+. +++||||||+||+++.++.+||+|||+++.
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 35789999999999998876322 2357899999999998 999999999999999999999999999986
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
...... .........|+..|+|||++.+..++.++||||+|++++++.....++..... ... +......
T Consensus 156 ~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~-----~~~~~~~-- 224 (264)
T cd06653 156 IQTICM---SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA-MAA-----IFKIATQ-- 224 (264)
T ss_pred cccccc---cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH-HHH-----HHHHHcC--
Confidence 532111 11112335689999999999988899999999999877775544333322111 111 1111100
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
......++.+.+.+++++.+|++ +|.+||++.+++.
T Consensus 225 ~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 225 PTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred CCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 00111222344445557779999 5799999998764
No 350
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.93 E-value=9.1e-27 Score=248.76 Aligned_cols=230 Identities=26% Similarity=0.327 Sum_probs=168.3
Q ss_pred CCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+|+..+.||+|++|.||+|.... ..+.+.+|+.++++++||||+++++++.... ....+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE---KNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC---CCeEE
Confidence 46778999999999999987641 1457889999999999999999999986531 24589
Q ss_pred EEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
+||||+++++|.+++.... .++.+++.|++|||+. +++|+|++|+||++++++.+||+|||.+......
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 78 IFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred EEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 9999999999999886442 2367899999999997 9999999999999999999999999999876432
Q ss_pred cCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTI 875 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 875 (929)
... .......++..|+|||...+..++.++|||++|++++++.....++......... ...... .....
T Consensus 155 ~~~----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-----~~~~~~--~~~~~ 223 (260)
T cd06606 155 ETG----EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAA-----LYKIGS--SGEPP 223 (260)
T ss_pred ccc----ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH-----HHhccc--cCCCc
Confidence 110 0123346889999999999888999999999998776654433333222211000 011000 00001
Q ss_pred hhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 876 QLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 876 ~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..++.....+.+++.+|++.+|++||++.|+++
T Consensus 224 ~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 224 EIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 111122333444777999999999999999975
No 351
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.93 E-value=8.1e-27 Score=258.45 Aligned_cols=177 Identities=27% Similarity=0.318 Sum_probs=142.1
Q ss_pred HHHHhhCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCC
Q 002376 655 ELRRATGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS 716 (929)
Q Consensus 655 ~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~ 716 (929)
++...+++|+..+.||+|+||.||++.... ..+.+.+|++++++++||||+++++++....
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~- 82 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPL- 82 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC-
Confidence 345678899999999999999999986441 2356788999999999999999999885422
Q ss_pred CCcceEEEEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 717 KNMEFLALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 717 ~~~~~~~lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
...++||||+ +++|.++++... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||.+
T Consensus 83 ---~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~ 155 (328)
T cd07856 83 ---EDIYFVTELL-GTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLA 155 (328)
T ss_pred ---CcEEEEeehh-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccc
Confidence 2479999999 568888775322 2367899999999998 9999999999999999999999999998
Q ss_pred cccccccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
+..... .....++..|+|||++.+ ..++.++||||+|++++++.++..++
T Consensus 156 ~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f 206 (328)
T cd07856 156 RIQDPQ---------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLF 206 (328)
T ss_pred cccCCC---------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCC
Confidence 754211 122367889999998766 56899999999998888876554433
No 352
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.93 E-value=8e-27 Score=259.29 Aligned_cols=247 Identities=24% Similarity=0.268 Sum_probs=171.6
Q ss_pred CCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+|+..+.||+|+||.||+|+... ..+.+.+|+.+++.++||||+++.+++...+.......|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 47788999999999999987541 235788999999999999999999998765432334589
Q ss_pred EEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
+||||++ ++|.++++... .++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 9999997 58888876432 2467899999999998 9999999999999999999999999999876432
Q ss_pred cCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhhhcCCc-h-hhh---------------
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVESNLPE-N-VLQ--------------- 857 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~-~~~--------------- 857 (929)
... ........++..|+|||++.+. .++.++||||+|++++++.....++..... . ...
T Consensus 157 ~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 233 (330)
T cd07834 157 EDE---KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKF 233 (330)
T ss_pred ccc---cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhh
Confidence 110 0112334678999999999888 799999999999887776555443322111 0 000
Q ss_pred ccChHHHHhhcccc-hhhhhh---hHHHHHHHHHHhccccCCCCCCCCCHHHHHHH--HHhhHH
Q 002376 858 VLDPELRQLMTSNE-SQTIQL---HDCLITIIGSVGLSCTTESPGGRIGIREALRR--LKSSQE 915 (929)
Q Consensus 858 ~~~~~l~~~~~~~~-~~~~~~---~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~--L~~~~~ 915 (929)
.............. ...... ...+...+.+++.+||+.+|++||+++++++. ++++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 234 ITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred ccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 00000000000000 000000 00112223348889999999999999999863 655443
No 353
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.93 E-value=6.6e-27 Score=258.22 Aligned_cols=174 Identities=27% Similarity=0.405 Sum_probs=135.9
Q ss_pred CCCCceeecccCceeEEeccccC---------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG---------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~---------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
+|+..+.||+|+||.||+|.... ..+.+.+|+.++++++||||+++++++... ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH---ADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC---CCc
Confidence 46778899999999999988642 124567899999999999999999999653 224
Q ss_pred eEEEEEEecCCCCcccccccc-------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC----CCceEE
Q 002376 721 FLALVYEFLSNGSLGDWIHGE-------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE----EMTAKV 783 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~-------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~----~~~~ki 783 (929)
..++||||+++ ++.+++... ..++.|++.|++|||+. +|+||||||+||+++. ++.+||
T Consensus 78 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl 153 (316)
T cd07842 78 SVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKI 153 (316)
T ss_pred eEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEE
Confidence 58999999974 666655311 12357899999999998 8999999999999999 999999
Q ss_pred eccccccccccccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhH
Q 002376 784 GDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVK 845 (929)
Q Consensus 784 ~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~ 845 (929)
+|||+++....... .........+++.|+|||++.+. .++.++||||+|++++++....
T Consensus 154 ~Dfg~~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~ 213 (316)
T cd07842 154 GDLGLARLFNAPLK---PLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLE 213 (316)
T ss_pred CCCccccccCCCcc---cccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcC
Confidence 99999986532211 11122345789999999988764 5899999999998887765443
No 354
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.93 E-value=5e-27 Score=258.32 Aligned_cols=175 Identities=29% Similarity=0.361 Sum_probs=137.8
Q ss_pred hCCCCCceeecccCceeEEeccccCc------------------HHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTGS------------------WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~~------------------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.++|+..+.||+|+||.||+|..... ...+.+|+.++++++||||+++++++.... ...
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~~~ 82 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKH---LDS 82 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCC---CCe
Confidence 46789999999999999999876410 124668999999999999999999986422 235
Q ss_pred EEEEEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.++||||++ ++|.+++... ..++.|++.|++|||+. +++||||||+||++++++.+||+|||+++..
T Consensus 83 ~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 83 IFLVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEEEEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeec
Confidence 799999996 4787776532 23467899999999998 8999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHh
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWV 847 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~ 847 (929)
.... .......+++.|+|||++.+ ..++.++||||+|++++++.....+
T Consensus 159 ~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~ 208 (309)
T cd07845 159 GLPA------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPL 208 (309)
T ss_pred CCcc------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCC
Confidence 3211 11122345788999999876 4579999999999888886555433
No 355
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.93 E-value=7.5e-27 Score=256.64 Aligned_cols=221 Identities=28% Similarity=0.353 Sum_probs=156.7
Q ss_pred CCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
.|+..+.||+|+||.||+|+... ..+++.+|+++++.++|||++++.+++... ...
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 90 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE-----HTA 90 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC-----Cee
Confidence 36667889999999999887531 124677899999999999999999998653 347
Q ss_pred EEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
++||||+. |++.+++.... ..+.+++.|++|||+. +++||||||+||+++.++.+|++|||++....
T Consensus 91 ~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 166 (308)
T cd06634 91 WLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166 (308)
T ss_pred EEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeec
Confidence 99999996 68777664211 2356899999999998 99999999999999999999999999987542
Q ss_pred cccCCCCCccccceeccccccccccccC---CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhccc
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGL---GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
. .....|++.|+|||++. ...++.++||||+|++++++.....++..... . ........ .
T Consensus 167 ~----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~----~~~~~~~~-~ 229 (308)
T cd06634 167 P----------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--M----SALYHIAQ-N 229 (308)
T ss_pred C----------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH--H----HHHHHHhh-c
Confidence 1 12346889999999974 35688999999999887765443322211110 0 00010000 0
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
...... .......+.+++.+||+.+|++||++.+++..
T Consensus 230 ~~~~~~-~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 230 ESPALQ-SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred CCCCcC-cccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 000000 01122233347779999999999999998754
No 356
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.93 E-value=1.8e-26 Score=247.14 Aligned_cols=223 Identities=22% Similarity=0.308 Sum_probs=158.9
Q ss_pred CCCCceeecccCceeEEeccccC---------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG---------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~---------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
+|...+.||+|+||.||+++... ...++..|+.++++++||||+++++++.+.+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERD----- 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCC-----
Confidence 47778999999999999875531 1224667999999999999999999985433
Q ss_pred eEEEEEEecCCCCcccccccc------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGE------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGl 788 (929)
..++||||+++++|.+++... ..++.|++.|++|||+. +++|+|+||+||++++ +.+|++|||+
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~ 151 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGV 151 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCc
Confidence 379999999999999887531 12356899999999998 9999999999999986 5699999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhc
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMT 868 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 868 (929)
++...... .......|++.|+|||...+..++.++||||+|++++++.....++... ...+.. .....
T Consensus 152 ~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~--~~~~~~----~~~~~ 219 (260)
T cd08222 152 SRLLMGSC------DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ--NFLSVV----LRIVE 219 (260)
T ss_pred eeecCCCc------ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc--cHHHHH----HHHHc
Confidence 88653211 1112346789999999998888999999999998776654433322111 111100 01000
Q ss_pred ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 869 SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.. ...........+.+++.+||+.+|++||++.|+++
T Consensus 220 -~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 220 -GP--TPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred -CC--CCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 00 00111122223334777999999999999999975
No 357
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.93 E-value=8.8e-27 Score=252.10 Aligned_cols=218 Identities=24% Similarity=0.254 Sum_probs=154.6
Q ss_pred ecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEec
Q 002376 669 IGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFL 729 (929)
Q Consensus 669 iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~ 729 (929)
||+|+||+||++.... ..+.+.+|++++++++||||+++++++.. ....|+||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFET-----KDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec-----CCeEEEEEecC
Confidence 6999999999886441 12356789999999999999999998854 33589999999
Q ss_pred CCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCC
Q 002376 730 SNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799 (929)
Q Consensus 730 ~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~ 799 (929)
++++|.+++.... .++.|++.|+.|||+. +++||||||+||++++++.+|++|||.++.....
T Consensus 76 ~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~---- 148 (277)
T cd05577 76 NGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG---- 148 (277)
T ss_pred CCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC----
Confidence 9999998886432 1256899999999998 9999999999999999999999999998765321
Q ss_pred CCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhH
Q 002376 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHD 879 (929)
Q Consensus 800 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 879 (929)
.......|+..|+|||++.+..++.++||||+|++++++.....++...... .....+........ ...+.
T Consensus 149 ---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~---~~~~~ 219 (277)
T cd05577 149 ---KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK---VEKEELKRRTLEMA---VEYPD 219 (277)
T ss_pred ---CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc---ccHHHHHhcccccc---ccCCc
Confidence 1112346788999999998888999999999998777765444433222110 00111111000000 00111
Q ss_pred HHHHHHHHHhccccCCCCCCCC-----CHHHHH
Q 002376 880 CLITIIGSVGLSCTTESPGGRI-----GIREAL 907 (929)
Q Consensus 880 ~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~ 907 (929)
....-+.+++.+||+.||++|| ++.+++
T Consensus 220 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll 252 (277)
T cd05577 220 KFSPEAKDLCEALLQKDPEKRLGCRGGSADEVR 252 (277)
T ss_pred cCCHHHHHHHHHHccCChhHccCCCcccHHHHH
Confidence 1122233477799999999999 555554
No 358
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.93 E-value=8.7e-27 Score=258.58 Aligned_cols=173 Identities=17% Similarity=0.206 Sum_probs=130.2
Q ss_pred eeeccc--CceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 667 NLIGSG--SFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 667 ~~iG~G--~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
..||+| +||+||++++.. ..+.+.+|+.+++.++||||+++++++... ...++||
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-----~~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTG-----SWLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecC-----CceEEEE
Confidence 356666 999999987641 135678899999999999999999999653 3479999
Q ss_pred EecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccccc
Q 002376 727 EFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 796 (929)
||+++|++.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+|++|||.+.......
T Consensus 79 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~ 155 (328)
T cd08226 79 PFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNG 155 (328)
T ss_pred ecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccC
Confidence 9999999999886421 2367899999999987 99999999999999999999999998654332111
Q ss_pred CCCC-CccccceeccccccccccccCCC--CCCCCCCCCCCcCCCCCcchhHHh
Q 002376 797 DNQS-SISSTHVFMGSIGYVPPEYGLGE--RPSTAGDVPTSESFAGEFNIVKWV 847 (929)
Q Consensus 797 ~~~~-~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DV~s~g~~~~~~~~~~~~ 847 (929)
.... .........++..|||||++.+. .++.++||||+|++++++.....+
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p 209 (328)
T cd08226 156 QKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVP 209 (328)
T ss_pred ccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 1100 00011122456779999998764 478999999999888776544333
No 359
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.93 E-value=9.8e-27 Score=253.56 Aligned_cols=226 Identities=20% Similarity=0.257 Sum_probs=160.5
Q ss_pred CCCCceeecccCceeEEecccc-----------------------CcHHHHHHHHHHHHcc-CCccccceeeecccCCCC
Q 002376 662 NFSHENLIGSGSFGSVLHNERT-----------------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSLDSK 717 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~-----------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~ 717 (929)
+|+..+.||+|+||.||+++.. ...+.+.+|+++++++ +||||+++++++..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~---- 76 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT---- 76 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeec----
Confidence 4677899999999999987642 1124577899999999 59999999988743
Q ss_pred CcceEEEEEEecCCCCcccccccccc--------ccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 718 NMEFLALVYEFLSNGSLGDWIHGERK--------NELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 718 ~~~~~~lV~e~~~~gsL~~~l~~~~~--------~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
....++||||+++|+|.+++..... ++.|++.||+|||+. +++||||||+||++++++.+||+|||++
T Consensus 77 -~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~ 152 (290)
T cd05613 77 -DTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 152 (290)
T ss_pred -CCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccc
Confidence 2347999999999999998864322 245899999999998 9999999999999999999999999999
Q ss_pred cccccccCCCCCccccceeccccccccccccCCC--CCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhccChHHHH
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE--RPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQVLDPELRQ 865 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ 865 (929)
+...... ........|+..|+|||++.+. .++.++||||+|++++++.....++..... ...++.+. ..
T Consensus 153 ~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~-~~- 225 (290)
T cd05613 153 KEFHEDE-----VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRR-IL- 225 (290)
T ss_pred eeccccc-----ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHH-hh-
Confidence 8653211 1112235689999999998753 468899999999888776655444321111 11111110 00
Q ss_pred hhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 002376 866 LMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRI-----GIREALR 908 (929)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 908 (929)
..... .+..+...+.+++.+|++.||++|| ++++++.
T Consensus 226 --~~~~~----~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 226 --KSEPP----YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred --ccCCC----CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 00111 1111223344477799999999997 6666654
No 360
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.93 E-value=2.5e-26 Score=246.94 Aligned_cols=230 Identities=21% Similarity=0.240 Sum_probs=160.1
Q ss_pred HHHHHhhCCCCCceee--cccCceeEEeccccCc----------HHHH-HHHHHHHHcc-CCccccceeeecccCCCCCc
Q 002376 654 DELRRATGNFSHENLI--GSGSFGSVLHNERTGS----------WKSF-IAECETLRNV-RHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 654 ~~l~~~~~~~~~~~~i--G~G~~g~Vy~~~~~~~----------~~~~-~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~ 719 (929)
.+.....++|+..+.+ |+|+||.||++..... .+.+ ..|+.....+ +||||+++++++...+
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~---- 82 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAIEPMVHQLMKDNPNFIKLYYSVTTLK---- 82 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchhhHHHHHHhhcCCCEEEEEEEEecCC----
Confidence 4445555677777766 9999999999876521 1111 1133333323 7999999999986533
Q ss_pred ceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC-ceEEecccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM-TAKVGDFGLAR 790 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~-~~ki~DfGla~ 790 (929)
..++||||+++|+|.++++... .++.|+++|++|||+. +++||||||+||+++.++ .++|+|||+++
T Consensus 83 -~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~ 158 (267)
T PHA03390 83 -GHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCK 158 (267)
T ss_pred -eeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccce
Confidence 4899999999999999986542 2367899999999998 899999999999999998 99999999987
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChH-HHHhhcc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE-LRQLMTS 869 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~ 869 (929)
.... .....|+..|+|||++.+..++.++||||+|++++++.....++..... +.++.. +......
T Consensus 159 ~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~ 225 (267)
T PHA03390 159 IIGT----------PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDED---EELDLESLLKRQQK 225 (267)
T ss_pred ecCC----------CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCc---chhhHHHHHHhhcc
Confidence 5421 1123688999999999998999999999999887776555444332111 111111 1111111
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCC-HHHHHH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIG-IREALR 908 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-~~ev~~ 908 (929)
.....+.....+.+++.+|++.+|++||+ ++|+++
T Consensus 226 ----~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 226 ----KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred ----cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 01111112233344777999999999996 588763
No 361
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.93 E-value=1e-26 Score=253.99 Aligned_cols=171 Identities=28% Similarity=0.370 Sum_probs=134.4
Q ss_pred CCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
++|+..+.||+|++|.||+|.... ..+.+.+|++++++++||||+++++++... ...
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE-----KRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecC-----CeE
Confidence 578889999999999999987541 124678899999999999999999998543 358
Q ss_pred EEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC-CCceEEeccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE-EMTAKVGDFGLARF 791 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~-~~~~ki~DfGla~~ 791 (929)
++||||++ +++.+++.... ..+.||+.||+|||+. +++||||||+||++++ ++.+||+|||+++.
T Consensus 77 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~ 152 (294)
T PLN00009 77 YLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARA 152 (294)
T ss_pred EEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccc
Confidence 99999996 57877664221 2356899999999998 9999999999999985 55799999999975
Q ss_pred cccccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHH
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKW 846 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~ 846 (929)
.... ........|++.|+|||++.+. .++.++||||+|++++++.....
T Consensus 153 ~~~~------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~ 202 (294)
T PLN00009 153 FGIP------VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKP 202 (294)
T ss_pred cCCC------ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 4221 1111233678999999988764 57999999999988777655433
No 362
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.93 E-value=6.8e-27 Score=256.39 Aligned_cols=178 Identities=29% Similarity=0.411 Sum_probs=138.2
Q ss_pred HhhCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCC---
Q 002376 658 RATGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS--- 716 (929)
Q Consensus 658 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~--- 716 (929)
.+.++|+..+.||+|+||.||+|.... ....+.+|++++++++||||+++++++.+...
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 456789999999999999999988641 12456789999999999999999999865431
Q ss_pred --CCcceEEEEEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEec
Q 002376 717 --KNMEFLALVYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGD 785 (929)
Q Consensus 717 --~~~~~~~lV~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~D 785 (929)
......++|+||+++ ++.+.+... ..++.|++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeCc
Confidence 112368999999975 666655432 13357899999999998 999999999999999999999999
Q ss_pred cccccccccccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchh
Q 002376 786 FGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIV 844 (929)
Q Consensus 786 fGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~ 844 (929)
||.++....... .......++..|+|||++.+. .++.++||||+|++++++...
T Consensus 160 fg~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g 214 (302)
T cd07864 160 FGLARLYNSEES-----RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTK 214 (302)
T ss_pred ccccccccCCcc-----cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhC
Confidence 999986532211 111223567889999988654 578999999999887776543
No 363
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.93 E-value=4.7e-27 Score=217.21 Aligned_cols=165 Identities=28% Similarity=0.459 Sum_probs=134.6
Q ss_pred CCCCceeecccCceeEEecccc------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERT------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
.|+..++||+|.||+||+|+.. +......+|+.+++.++|.|||+++++..+ .....
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhs-----dkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-----DKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhcc-----CceeE
Confidence 4667789999999999999865 223567899999999999999999999854 33489
Q ss_pred EEEEecCCCCccccccc---------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHG---------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~---------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
+|+|||. .+|..+... .+....|+.+|+.|+|++ .+.|||+||.|.||+.+|+.|++|||+||.+.-
T Consensus 78 lvfe~cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgi 153 (292)
T KOG0662|consen 78 LVFEFCD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGI 153 (292)
T ss_pred EeHHHhh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCC
Confidence 9999995 466665542 234578999999999998 899999999999999999999999999997632
Q ss_pred ccCCCCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCc
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEF 841 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~ 841 (929)
. .......+-|.+|++|.++.|.+ |+++.|+||.||+..|+
T Consensus 154 p------vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifael 195 (292)
T KOG0662|consen 154 P------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195 (292)
T ss_pred c------eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHH
Confidence 1 22223346799999999998876 89999999999876554
No 364
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.93 E-value=2.1e-26 Score=249.78 Aligned_cols=231 Identities=23% Similarity=0.294 Sum_probs=156.7
Q ss_pred CCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccC-CccccceeeecccCCCCCcceEEE
Q 002376 663 FSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
|+..+.||+|+||.||+|.... ......+|+.+++++. |||++++++++.+.. .+..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~---~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRK---TGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCC---CCcEEE
Confidence 5667899999999999987541 1123457888999885 999999999986531 235899
Q ss_pred EEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
||||++ |++.+++.... .++.|++.||+|||+. +++||||||+||++++ +.+||+|||+++.+...
T Consensus 78 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 78 VFELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSK 152 (282)
T ss_pred EEecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence 999996 58877775322 2367899999999998 9999999999999999 99999999999865321
Q ss_pred cCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hh---hhcc---ChHHHHh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NV---LQVL---DPELRQL 866 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~---~~~~---~~~l~~~ 866 (929)
.......++..|+|||++.. ..++.++||||+|++++++.....++..... .+ .+.. .+.+...
T Consensus 153 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (282)
T cd07831 153 -------PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKK 225 (282)
T ss_pred -------CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHh
Confidence 11122457899999997654 5578999999999888876554333321110 00 0000 0000000
Q ss_pred hcccchhhh-----------hhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 867 MTSNESQTI-----------QLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 867 ~~~~~~~~~-----------~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
......... ......+..+.+++.+||+.+|++||+++|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 226 FRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred hcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 000000000 000111233334888999999999999999875
No 365
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.93 E-value=7.1e-27 Score=260.72 Aligned_cols=181 Identities=24% Similarity=0.337 Sum_probs=138.0
Q ss_pred CCCCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCC------
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN------ 718 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~------ 718 (929)
.+|...+.||+|+||.||+|.... ..+.+.+|++++++++||||+++++++.......
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 578889999999999999987641 2456889999999999999999998876533211
Q ss_pred ---cceEEEEEEecCCCCcccccccc-------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeec-CCCceEEeccc
Q 002376 719 ---MEFLALVYEFLSNGSLGDWIHGE-------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLD-EEMTAKVGDFG 787 (929)
Q Consensus 719 ---~~~~~lV~e~~~~gsL~~~l~~~-------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~-~~~~~ki~DfG 787 (929)
....++||||++ ++|.+++... +.++.|++.||+|||+. +|+||||||+||+++ +++.+|++|||
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl~dfg 160 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKIGDFG 160 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEECCcc
Confidence 135799999997 5888776532 23467999999999998 999999999999997 45678999999
Q ss_pred cccccccccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 788 LARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 788 la~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
.++.+...... ........|+..|+|||++.+ ..++.++||||+|++++++.....++
T Consensus 161 ~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf 219 (342)
T cd07854 161 LARIVDPHYSH---KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLF 219 (342)
T ss_pred cceecCCcccc---ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCC
Confidence 99865321111 111122367889999998654 45889999999998888765544433
No 366
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.93 E-value=1.2e-26 Score=252.12 Aligned_cols=169 Identities=24% Similarity=0.402 Sum_probs=135.3
Q ss_pred CCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
+|+..+.||+|++|.||+|+... ..+.+.+|++++++++||||+++++++...+ ..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTEN-----KLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCC-----cEEE
Confidence 47888999999999999988641 1346778999999999999999999986533 4799
Q ss_pred EEEecCCCCccccccccc-----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGER-----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~-----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
||||++ |+|.+++.... .++.|++.||+|||+. +++||||||+||++++++.+|++|||+++...
T Consensus 76 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~ 151 (284)
T cd07836 76 VFEYMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFG 151 (284)
T ss_pred EEecCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhc
Confidence 999998 48888765321 2357899999999987 99999999999999999999999999997653
Q ss_pred cccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhH
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVK 845 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~ 845 (929)
... .......++..|+|||++.+. .++.++|||++|++++++....
T Consensus 152 ~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~ 198 (284)
T cd07836 152 IPV------NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGR 198 (284)
T ss_pred CCc------cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 211 111223578899999988664 4789999999998877765443
No 367
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.93 E-value=1.4e-26 Score=255.53 Aligned_cols=235 Identities=17% Similarity=0.186 Sum_probs=158.5
Q ss_pred ceeecccCceeEEecccc----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEec
Q 002376 666 ENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFL 729 (929)
Q Consensus 666 ~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~ 729 (929)
.+.+|.|+++.||+++.. ...+.+.+|++++++++||||+++++++... ...+++|||+
T Consensus 7 ~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~-----~~~~~~~e~~ 81 (314)
T cd08216 7 GKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVD-----SELYVVSPLM 81 (314)
T ss_pred hHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecC-----CeEEEEEecc
Confidence 445566677777766553 1235788999999999999999999988543 3489999999
Q ss_pred CCCCcccccccc----------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCC
Q 002376 730 SNGSLGDWIHGE----------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ 799 (929)
Q Consensus 730 ~~gsL~~~l~~~----------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~ 799 (929)
++|+|.++++.. ..++.|++.||+|||+. +|+||||||+||++++++.+|++|||.+..+.......
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~ 158 (314)
T cd08216 82 AYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ 158 (314)
T ss_pred CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccc
Confidence 999999988642 12367899999999998 99999999999999999999999999987653221110
Q ss_pred -CCccccceeccccccccccccCCC--CCCCCCCCCCCcCCCCCcchhHHhhhcCCch--hhhc--------cChHHHHh
Q 002376 800 -SSISSTHVFMGSIGYVPPEYGLGE--RPSTAGDVPTSESFAGEFNIVKWVESNLPEN--VLQV--------LDPELRQL 866 (929)
Q Consensus 800 -~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~--~~~~--------~~~~l~~~ 866 (929)
..........++..|+|||++.+. .++.++||||+|++++++.....++...+.. ..+. ++......
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (314)
T cd08216 159 RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPL 238 (314)
T ss_pred cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhh
Confidence 011112334678899999998764 5889999999998887765544443322210 0000 00000000
Q ss_pred h----c----------ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 867 M----T----------SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 867 ~----~----------~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
. . ............+...+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 239 YEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred hcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 0 0 0000000011112223344888999999999999999985
No 368
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.93 E-value=1.7e-26 Score=250.67 Aligned_cols=231 Identities=24% Similarity=0.311 Sum_probs=162.1
Q ss_pred CCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 663 FSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
|+..+.||+|++|.||++.... ..+.+.+|++++++++||||+++++++... ...++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHK-----GDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccC-----CCEEE
Confidence 5567899999999999987641 134678899999999999999999998653 34899
Q ss_pred EEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
||||+++ ++.+++... ..++.+++.|++|||+. +|+||||||+||++++++.+||+|||.+......
T Consensus 76 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~ 151 (283)
T cd05118 76 VFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSP 151 (283)
T ss_pred EEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCC
Confidence 9999975 888777542 12367899999999998 9999999999999999999999999999866432
Q ss_pred cCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhc----cC--hHHHH-
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQV----LD--PELRQ- 865 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~----~~--~~l~~- 865 (929)
. .......++..|+|||.+.+. .++.++||||+|++++++.....++..... ....+ .+ +....
T Consensus 152 ~------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (283)
T cd05118 152 V------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPK 225 (283)
T ss_pred c------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhccc
Confidence 1 111224578899999998877 789999999999888776555433221110 00000 00 00000
Q ss_pred ----------hhcccch-hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 866 ----------LMTSNES-QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 866 ----------~~~~~~~-~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
....... ........+...+.+++.+||++||.+||++.|++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 226 FTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred chhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0000000 000011122333445888999999999999999875
No 369
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.93 E-value=1.1e-26 Score=251.41 Aligned_cols=218 Identities=21% Similarity=0.229 Sum_probs=151.4
Q ss_pred eecccCceeEEeccccCc-------------------HHHHHHHHH---HHHccCCccccceeeecccCCCCCcceEEEE
Q 002376 668 LIGSGSFGSVLHNERTGS-------------------WKSFIAECE---TLRNVRHRNLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 668 ~iG~G~~g~Vy~~~~~~~-------------------~~~~~~E~~---~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV 725 (929)
.||+|+||.||+++.... ...+..|.. .++..+||+|+++.+++.+. ...++|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP-----DKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecC-----CEEEEE
Confidence 489999999998765310 112344443 34445799999999988543 358999
Q ss_pred EEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 726 YEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
|||+++|+|.+++.... .++.|+++|++|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 76 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~-- 150 (278)
T cd05606 76 LDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-- 150 (278)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--
Confidence 99999999998875332 3467899999999997 8999999999999999999999999998754211
Q ss_pred CCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQ 876 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 876 (929)
......|+..|+|||++.++ .++.++||||+|++++++.....++...........+.... .....
T Consensus 151 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~---- 217 (278)
T cd05606 151 ------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL---TMAVE---- 217 (278)
T ss_pred ------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhh---ccCCC----
Confidence 11234689999999998755 58999999999988877665554443221100010111110 00011
Q ss_pred hhHHHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 002376 877 LHDCLITIIGSVGLSCTTESPGGRI-----GIREALR 908 (929)
Q Consensus 877 ~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 908 (929)
.+...+.-+.+++.+|+..+|++|| ++.|+++
T Consensus 218 ~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 218 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 1111122233477799999999999 9999985
No 370
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.93 E-value=5.9e-26 Score=242.39 Aligned_cols=224 Identities=24% Similarity=0.354 Sum_probs=164.3
Q ss_pred CCCCceeecccCceeEEecccc------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERT------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+|+..+.||+|+||.||++... ...+.+.+|+++++.++|||++++.+.+... ...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~-----~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK-----GKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC-----CEEE
Confidence 4777899999999999988765 1235688999999999999999999988543 4589
Q ss_pred EEEEecCCCCccccccccc------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
+|+||+++++|.++++... .++.+++.|++|||+. +++|+||+|+||++++++.+||+|||++..
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~ 152 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKV 152 (258)
T ss_pred EEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceee
Confidence 9999999999999886532 2356899999999998 999999999999999999999999999986
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
..... .......|++.|+|||...+..++.++|||++|++++++.....++... ...++..........
T Consensus 153 ~~~~~------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~--~~~~~~~~~~~~~~~--- 221 (258)
T cd08215 153 LSSTV------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGE--NLLELALKILKGQYP--- 221 (258)
T ss_pred cccCc------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCC--cHHHHHHHHhcCCCC---
Confidence 53221 1122346889999999999989999999999997766644333222111 111111111110000
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..+......+.+++.+||+.+|++||++.|+++
T Consensus 222 ----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 222 ----PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred ----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 001111222334777999999999999999875
No 371
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.93 E-value=1.3e-26 Score=251.94 Aligned_cols=173 Identities=26% Similarity=0.393 Sum_probs=136.8
Q ss_pred CCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 663 FSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
|+..+.||+|+||.||+|.... ..+.+.+|++++++++|||++++++++...+ ....++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG---KGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC---CCcEEE
Confidence 5667899999999999987642 1346889999999999999999999986531 245899
Q ss_pred EEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
||||++ ++|.+++... ..++.+++.|++|||+. +++|+||||+||++++++.+||+|||+++.....
T Consensus 78 v~e~~~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 78 VFEYMD-HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred Eecccc-ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 999997 4888877543 13367899999999998 8999999999999999999999999999865322
Q ss_pred cCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWV 847 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~ 847 (929)
.. .......++..|+|||.+.+. .++.++|||++|++++++.....+
T Consensus 154 ~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p 201 (287)
T cd07840 154 NS-----ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPI 201 (287)
T ss_pred Cc-----ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCC
Confidence 11 112233568899999987654 579999999999888876554433
No 372
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.93 E-value=1.9e-26 Score=246.98 Aligned_cols=221 Identities=24% Similarity=0.267 Sum_probs=154.6
Q ss_pred eeecccCceeEEeccccCc-------------------HHHHHHHHHHH-HccCCccccceeeecccCCCCCcceEEEEE
Q 002376 667 NLIGSGSFGSVLHNERTGS-------------------WKSFIAECETL-RNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~~-------------------~~~~~~E~~~l-~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
+.||+|+||.||+|..... ...+..|..++ ...+|||++++++++... ...|+||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~-----~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSK-----DYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcC-----CeEEEEE
Confidence 4689999999999876410 11234454443 445899999999998543 3589999
Q ss_pred EecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 727 EFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
||+++|+|.++++... .++.|++.||+|||+. +++||||||+||++++++.+||+|||+++....
T Consensus 77 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---- 149 (260)
T cd05611 77 EYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE---- 149 (260)
T ss_pred eccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc----
Confidence 9999999999886422 3367899999999998 999999999999999999999999999875421
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLH 878 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 878 (929)
.....|++.|+|||.+.+..++.++||||+|++++++.++..++..... .+.......... .......
T Consensus 150 ------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~----~~~~~~~ 217 (260)
T cd05611 150 ------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP--DAVFDNILSRRI----NWPEEVK 217 (260)
T ss_pred ------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhccc----CCCCccc
Confidence 1234688999999999888899999999999888776555544322211 111111111000 0000011
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 002376 879 DCLITIIGSVGLSCTTESPGGRIGIREALRRLK 911 (929)
Q Consensus 879 ~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 911 (929)
+.+..-+.+++.+||+.+|++||++.++.+.+.
T Consensus 218 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 218 EFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred ccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 112222334777999999999998876655543
No 373
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=6.4e-27 Score=269.89 Aligned_cols=183 Identities=26% Similarity=0.314 Sum_probs=149.2
Q ss_pred hHHHHHhhCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeeccc
Q 002376 653 YDELRRATGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSS 713 (929)
Q Consensus 653 ~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~ 713 (929)
..+++...++|.+.++||+|+||.|..++.+. +...|..|-.+|..-+.+.||+++..|
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF-- 144 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF-- 144 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh--
Confidence 35666677899999999999999998877752 234577899999999999999999888
Q ss_pred CCCCCcceEEEEEEecCCCCcccccccc--------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEec
Q 002376 714 LDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGD 785 (929)
Q Consensus 714 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~--------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~D 785 (929)
++..++|+|||||+||+|-..+.+. +.+...|..||.-+|+. |+|||||||.|||+|..|++|++|
T Consensus 145 ---QD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLAD 218 (1317)
T KOG0612|consen 145 ---QDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLAD 218 (1317)
T ss_pred ---cCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeecc
Confidence 4456699999999999998877643 34466788999999997 999999999999999999999999
Q ss_pred cccccccccccCCCCCccccceeccccccccccccC----C-CCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 786 FGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGL----G-ERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 786 fGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
||.+-.+... ........+|||-|++||++. + +.|+..+|-||+|+++|||..+.-++
T Consensus 219 FGsClkm~~d-----G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPF 281 (1317)
T KOG0612|consen 219 FGSCLKMDAD-----GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPF 281 (1317)
T ss_pred chhHHhcCCC-----CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcc
Confidence 9988766432 112334568999999999875 3 56999999999999888876555443
No 374
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.93 E-value=1.1e-26 Score=259.18 Aligned_cols=177 Identities=24% Similarity=0.346 Sum_probs=139.7
Q ss_pred HHHhhCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCC
Q 002376 656 LRRATGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSK 717 (929)
Q Consensus 656 l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 717 (929)
+....++|+..+.||+|+||.||++.... ..+.+.+|++++++++||||+++++++......
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 33456789999999999999999986531 124577899999999999999999988653321
Q ss_pred -CcceEEEEEEecCCCCcccccccc-------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 718 -NMEFLALVYEFLSNGSLGDWIHGE-------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 718 -~~~~~~lV~e~~~~gsL~~~l~~~-------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
.....++||||+ +++|.+++... +.++.|++.|++|||+. +|+||||||+||++++++.+|++|||++
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~~ 165 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLA 165 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccc
Confidence 123469999999 67888877532 23467999999999998 9999999999999999999999999999
Q ss_pred cccccccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhH
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVK 845 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~ 845 (929)
+..... .....+++.|+|||++.+ ..++.++||||+|++++++....
T Consensus 166 ~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~ 213 (343)
T cd07880 166 RQTDSE---------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGK 213 (343)
T ss_pred cccccC---------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 854211 123467899999999876 45899999999998877765443
No 375
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.93 E-value=3.3e-26 Score=248.38 Aligned_cols=167 Identities=26% Similarity=0.395 Sum_probs=133.6
Q ss_pred CCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccC-CccccceeeecccCCCCCcceEEE
Q 002376 663 FSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
|+..+.||+|+||+||+|.... ......+|+..+++++ |||++++++++... ...++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~-----~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFREN-----DELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcC-----CcEEE
Confidence 5667899999999999998642 1123457999999999 99999999998653 34899
Q ss_pred EEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
||||+ +|+|.+++.... ..+.|++.||+|||+. +++|+||||+||++++++.+||+|||.++....
T Consensus 76 v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~ 151 (283)
T cd07830 76 VFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRS 151 (283)
T ss_pred EEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccC
Confidence 99999 889988876432 2356899999999998 999999999999999999999999999986532
Q ss_pred ccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhH
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVK 845 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~ 845 (929)
. .......|+..|+|||++.+ ..++.++||||+|++++++....
T Consensus 152 ~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~ 196 (283)
T cd07830 152 R-------PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLR 196 (283)
T ss_pred C-------CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCC
Confidence 1 11123467889999998754 45799999999998887765544
No 376
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.93 E-value=2.1e-26 Score=249.41 Aligned_cols=230 Identities=26% Similarity=0.334 Sum_probs=164.9
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccC-CccccceeeecccCCCCCcc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~~ 720 (929)
++|...+.||+|+||.||++.... ..+.+.+|++++++++ ||||+++++++... .
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~-----~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDE-----E 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCC-----c
Confidence 468888999999999999987641 1245778999999998 99999999988543 3
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
..++||||+++++|.+++.... .++.|++.||+|||+. +++|+||||+||+++.++.++++|||++...
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~ 152 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVL 152 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCcccccc
Confidence 4899999999999999987542 2367899999999998 9999999999999999999999999999866
Q ss_pred ccccCCCC--------------CccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhc
Q 002376 793 LERVDNQS--------------SISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQV 858 (929)
Q Consensus 793 ~~~~~~~~--------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~ 858 (929)
........ .........|+..|+|||+..+..++.++|||++|++++++.....++..... .+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~- 229 (280)
T cd05581 153 DPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE--YL- 229 (280)
T ss_pred CCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH--HH-
Confidence 43221100 01122345688999999999888899999999999776665433332222111 00
Q ss_pred cChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCH----HHHHH
Q 002376 859 LDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGI----REALR 908 (929)
Q Consensus 859 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~----~ev~~ 908 (929)
............. ....+.+.+++.+|++.+|++||++ +|+++
T Consensus 230 ---~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 230 ---TFQKILKLEYSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ---HHHHHHhcCCCCC----CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 0111100011111 1112223337779999999999999 66653
No 377
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.93 E-value=8.8e-26 Score=240.06 Aligned_cols=225 Identities=25% Similarity=0.313 Sum_probs=164.6
Q ss_pred CCCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV 725 (929)
+|+..+.||+|++|.||++.... ..+.+.+|++.+++++||+++++++++... ...++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKK-----DELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-----CeEEEE
Confidence 46778999999999999987641 245788999999999999999999998543 348999
Q ss_pred EEecCCCCcccccccc-c--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccccc
Q 002376 726 YEFLSNGSLGDWIHGE-R--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~~-~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 796 (929)
+||+++++|.+++... + .++.+++.|++|||+. +++||||+|+||++++++.+||+|||.+.......
T Consensus 76 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 152 (253)
T cd05122 76 MEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK 152 (253)
T ss_pred EecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccccccccc
Confidence 9999999999988654 1 2357899999999997 99999999999999999999999999988654221
Q ss_pred CCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhh
Q 002376 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQ 876 (929)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 876 (929)
. .....|+..|+|||++.+..++.++|||++|++++++.....++..... .+............ ....
T Consensus 153 ~-------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~-~~~~-- 220 (253)
T cd05122 153 A-------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP--MKALFKIATNGPPG-LRNP-- 220 (253)
T ss_pred c-------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch--HHHHHHHHhcCCCC-cCcc--
Confidence 1 2345688999999999988899999999999877765444333222211 00000000000000 0000
Q ss_pred hhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 877 LHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 877 ~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.....-+.+++.+||+.||++|||+.|+++
T Consensus 221 --~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 221 --EKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred --cccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000122333777999999999999999875
No 378
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.93 E-value=1.7e-26 Score=245.10 Aligned_cols=218 Identities=23% Similarity=0.275 Sum_probs=157.7
Q ss_pred ceeecccCceeEEecccc------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEE
Q 002376 666 ENLIGSGSFGSVLHNERT------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYE 727 (929)
Q Consensus 666 ~~~iG~G~~g~Vy~~~~~------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e 727 (929)
.+++|+|-||+||-|+++ +...+..+|+++|+.++||.||.+...|.+ .+.+++|||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET-----~ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFET-----PERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecC-----CceEEEEeh
Confidence 478999999999988776 234678899999999999999999988854 445999999
Q ss_pred ecCCCCccccc-ccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC---CceEEecccccccccc
Q 002376 728 FLSNGSLGDWI-HGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE---MTAKVGDFGLARFLLE 794 (929)
Q Consensus 728 ~~~~gsL~~~l-~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~---~~~ki~DfGla~~~~~ 794 (929)
-+ +|+..+++ ... +....||+.||.|||.. +|+|+|+||+|||+.+. -.+|+||||+||.+.+
T Consensus 644 Kl-~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE 719 (888)
T KOG4236|consen 644 KL-HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE 719 (888)
T ss_pred hh-cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecch
Confidence 99 45655544 211 12257999999999998 99999999999999643 3799999999998864
Q ss_pred ccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQT 874 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 874 (929)
. .....++||+.|.|||+++.+.|...-|+||.|++.|--. .+.+|....+-+...+.... ....
T Consensus 720 k-------sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsL-----SGTFPFNEdEdIndQIQNAa---FMyP 784 (888)
T KOG4236|consen 720 K-------SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSL-----SGTFPFNEDEDINDQIQNAA---FMYP 784 (888)
T ss_pred h-------hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEe-----cccccCCCccchhHHhhccc---cccC
Confidence 3 2345579999999999999999999999999998776533 34444422222222222111 1111
Q ss_pred hhhhHHHHHHHHHHhccccCCCCCCCCCHHHHH
Q 002376 875 IQLHDCLITIIGSVGLSCTTESPGGRIGIREAL 907 (929)
Q Consensus 875 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~ 907 (929)
+..|..+....-+++...++..-.+|-+.+..+
T Consensus 785 p~PW~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 785 PNPWSEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred CCchhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 222223332222377788888888888877654
No 379
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1e-26 Score=256.19 Aligned_cols=221 Identities=25% Similarity=0.261 Sum_probs=171.4
Q ss_pred hCCCCCceeecccCceeEEeccccCcHH------------HHHHHHHHHHcc-CCccccceeeecccCCCCCcceEEEEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTGSWK------------SFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~------------~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
++.|.....+|.|+|+.|-++....+.+ +-.+|+.++... +||||+++.++|.+ ..+.|+||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~-----~~~~~~v~ 395 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYED-----GKEIYLVM 395 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeecceecC-----Cceeeeee
Confidence 5567777889999999998877663322 233577665555 79999999999943 44589999
Q ss_pred EecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeee-cCCCceEEeccccccccccccCC
Q 002376 727 EFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILL-DEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl-~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
|++.+|-+.+.+...+ .++.+++.|+.|||++ +|||||+||+|||+ ++.+.++|+|||.++.....
T Consensus 396 e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~--- 469 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS--- 469 (612)
T ss_pred hhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh---
Confidence 9999998877665322 3567889999999998 99999999999999 58999999999999976432
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLH 878 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 878 (929)
....+-|..|.|||++....|++++|+||+|+++|+|..+.-++...|.. ..+...+. .....
T Consensus 470 ------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~------~ei~~~i~-----~~~~s 532 (612)
T KOG0603|consen 470 ------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG------IEIHTRIQ-----MPKFS 532 (612)
T ss_pred ------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch------HHHHHhhc-----CCccc
Confidence 22335688999999999999999999999999988888777777766653 12222111 11122
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 879 DCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 879 ~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
++++...++|+..|++.||.+||+|.++..
T Consensus 533 ~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 533 ECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 566677777888999999999999999863
No 380
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.93 E-value=6.3e-26 Score=242.12 Aligned_cols=222 Identities=22% Similarity=0.273 Sum_probs=163.4
Q ss_pred CCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+|+..+.||+|+||.||+++... ...++.+|++++++++||||+++++++... ...+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG-----NKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC-----CEEE
Confidence 47778999999999999986541 134677899999999999999999998643 4589
Q ss_pred EEEEecCCCCccccccccc------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
+||||+++++|.+++.... .++.+++.|++|||+. +++||||||+||++++++.+|++|||+++.
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~ 152 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKV 152 (256)
T ss_pred EEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhh
Confidence 9999999999999886411 2356899999999998 999999999999999999999999999987
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
.... ......|++.|+|||.+.+..++.++||||+|++++++.....++..... . .+........
T Consensus 153 ~~~~--------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--~-----~~~~~~~~~~ 217 (256)
T cd08530 153 LKKN--------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM--Q-----DLRYKVQRGK 217 (256)
T ss_pred hccC--------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--H-----HHHHHHhcCC
Confidence 6432 11123578899999999999999999999999877775443333221111 0 1111000000
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
. ..........+.+++.+|++.+|++||++.|+++
T Consensus 218 ~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 218 Y--PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred C--CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 0011112223344778999999999999999875
No 381
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.92 E-value=1.9e-26 Score=257.49 Aligned_cols=181 Identities=23% Similarity=0.350 Sum_probs=143.5
Q ss_pred ChHHHHHhhCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeeccc
Q 002376 652 SYDELRRATGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSS 713 (929)
Q Consensus 652 ~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~ 713 (929)
...++..++++|...+.||+|+||.||++.... ..+.+.+|+.++++++||||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 446677788999999999999999999986431 13457789999999999999999998754
Q ss_pred CCC-CCcceEEEEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEec
Q 002376 714 LDS-KNMEFLALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGD 785 (929)
Q Consensus 714 ~~~-~~~~~~~lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~D 785 (929)
... ......++|+|++ +++|.++++..+ .++.|+++|++|||+. +|+||||||+||++++++.+||+|
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~d 163 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILD 163 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEEEec
Confidence 321 1223468888887 788987765322 3467899999999998 999999999999999999999999
Q ss_pred cccccccccccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhH
Q 002376 786 FGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVK 845 (929)
Q Consensus 786 fGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~ 845 (929)
||+++.... ......|+..|+|||++.+ ..++.++||||+|++++++..+.
T Consensus 164 fg~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~ 215 (345)
T cd07877 164 FGLARHTDD---------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 215 (345)
T ss_pred ccccccccc---------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCC
Confidence 999875421 1123468899999999876 46899999999998887765443
No 382
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.92 E-value=1.2e-25 Score=239.47 Aligned_cols=224 Identities=26% Similarity=0.356 Sum_probs=164.2
Q ss_pred CCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
+|+..+.||+|++|.||++.... ..+.+.+|++++++++|||++++++++... ...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS-----DSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC-----CEEE
Confidence 46778999999999999986531 235688999999999999999999998542 4589
Q ss_pred EEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
+||||+++++|.+++.... .++.+++.|++|||+. +|+||||||+||+++.++.+||+|||.++.....
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (254)
T cd06627 76 IILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDV 152 (254)
T ss_pred EEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCC
Confidence 9999999999999886432 2367899999999998 9999999999999999999999999999866432
Q ss_pred cCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTI 875 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 875 (929)
.. ......|+..|+|||+..+..++.++|||++|++++++.....++..... ... ........ ..
T Consensus 153 ~~------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~-~~~-----~~~~~~~~---~~ 217 (254)
T cd06627 153 SK------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP-MAA-----LFRIVQDD---HP 217 (254)
T ss_pred cc------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH-HHH-----HHHHhccC---CC
Confidence 11 12234688999999999888899999999999877765443322221111 000 01100000 00
Q ss_pred hhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 876 QLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 876 ~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..+..+...+.+++.+|++.+|++||++.|++.
T Consensus 218 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 218 PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 111112223334777999999999999999874
No 383
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=2.5e-27 Score=244.83 Aligned_cols=433 Identities=23% Similarity=0.237 Sum_probs=241.4
Q ss_pred EcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccc-ccc
Q 002376 77 NLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMA-NKI 155 (929)
Q Consensus 77 ~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l 155 (929)
|-++.+|+ .||..+- ..-+.++|..|+|+...|.+|+.+++||.||||+|+|+.+-|..|.++.+|.+|-+-+ |+|
T Consensus 52 dCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI 128 (498)
T KOG4237|consen 52 DCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKI 128 (498)
T ss_pred EccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCch
Confidence 33444455 5555443 3458899999999988888999999999999999999999999999999987766555 999
Q ss_pred CCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecC
Q 002376 156 TGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQ 235 (929)
Q Consensus 156 ~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 235 (929)
+ .+|.+.|++|.+|+.|.+.-|++.- +....|..|++|..|.|..|.+..+--.+|..+.+++++.+..|.
T Consensus 129 ~-~l~k~~F~gL~slqrLllNan~i~C--------ir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np 199 (498)
T KOG4237|consen 129 T-DLPKGAFGGLSSLQRLLLNANHINC--------IRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNP 199 (498)
T ss_pred h-hhhhhHhhhHHHHHHHhcChhhhcc--------hhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCc
Confidence 8 8999999999999999999888733 344577888999999999999996666699999999999999887
Q ss_pred CCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCC-CccceeccccccccCCCC
Q 002376 236 LGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNL-PFLRTYNIGFNKIVSSGD 314 (929)
Q Consensus 236 l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~i~~~~~ 314 (929)
+--. . .++.+.... ...|.+++...-..-..+.++++..+-+..|..- ..+..=..+........
T Consensus 200 ~icd-----C-nL~wla~~~-------a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~c- 265 (498)
T KOG4237|consen 200 FICD-----C-NLPWLADDL-------AMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSIC- 265 (498)
T ss_pred cccc-----c-ccchhhhHH-------hhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcC-
Confidence 4310 0 011111100 0122223333333333333333332222222111 00000000000000000
Q ss_pred CCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccC
Q 002376 315 DEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIP 394 (929)
Q Consensus 315 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 394 (929)
....|..+++|+.|+|++|++++.-+.+|.... .+++|+|..|+|...-...|.++..|+.|+|.+|+|+..-|
T Consensus 266 -----P~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a-~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~ 339 (498)
T KOG4237|consen 266 -----PAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAA-ELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAP 339 (498)
T ss_pred -----hHHHHhhcccceEeccCCCccchhhhhhhcchh-hhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEec
Confidence 012344455555555555555544444444444 45555555555554444455555555555555555555555
Q ss_pred ccccCCCCCCEEEecCCcCCCCCcccccCCCCCcee--cccCcccccccCcccccccccceecccCCcCCCCCCCCcccC
Q 002376 395 IEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQI--DLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRP 472 (929)
Q Consensus 395 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L--~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~ 472 (929)
..|..+.+|.+|+|-.|.+-- ++ .|.+| .|..+.-.|..|- +.-..++.++++.+.+...--.
T Consensus 340 ~aF~~~~~l~~l~l~~Np~~C-------nC-~l~wl~~Wlr~~~~~~~~~C--q~p~~~~~~~~~dv~~~~~~c~----- 404 (498)
T KOG4237|consen 340 GAFQTLFSLSTLNLLSNPFNC-------NC-RLAWLGEWLRKKSVVGNPRC--QSPGFVRQIPISDVAFGDFRCG----- 404 (498)
T ss_pred ccccccceeeeeehccCcccC-------cc-chHHHHHHHhhCCCCCCCCC--CCCchhccccchhccccccccC-----
Confidence 555555555555555544320 00 00000 0111111111111 1111233444444433211000
Q ss_pred Cchhhh---------cccCcc-EEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCC
Q 002376 473 LPEEIS---------RLENVV-TIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLS 542 (929)
Q Consensus 473 ~p~~~~---------~l~~L~-~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 542 (929)
.|++.+ ..+-+. +..-|++.+. .+|..+- ..-.+|++.+|.++ .+|.. .+.+| .+|+|+|+++
T Consensus 405 ~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~ 477 (498)
T KOG4237|consen 405 GPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGIP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRIS 477 (498)
T ss_pred CccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCCC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCcee
Confidence 011111 011111 1223333333 4443321 23467888888888 55655 56777 8899999888
Q ss_pred CcCCcccccCCCCCeEeCCCC
Q 002376 543 GSIPSDLQNLQALRSLNLTFN 563 (929)
Q Consensus 543 ~~~p~~~~~l~~L~~L~Ls~N 563 (929)
-.--..|.++++|.+|-||+|
T Consensus 478 ~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 478 SLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred hhhcccccchhhhheeEEecC
Confidence 666678888999999988886
No 384
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.92 E-value=6e-26 Score=248.12 Aligned_cols=228 Identities=22% Similarity=0.254 Sum_probs=157.0
Q ss_pred hCCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccC-CccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.++|+..+.||+|+||.||+|++.. ..+++.+|+.++.+.. ||||++++++|.+. ..
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~-----~~ 88 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITD-----SD 88 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecC-----Ce
Confidence 3567888999999999999988751 1234667887777775 99999999998643 34
Q ss_pred EEEEEEecCCCCccccccc---------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHG---------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~---------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.|+||||++ +++.++... ...++.+++.|++|||+. .+|+||||||+||++++++.+||+|||+++.+
T Consensus 89 ~~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~ 165 (296)
T cd06618 89 VFICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRL 165 (296)
T ss_pred EEEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhc
Confidence 899999985 466555432 123577899999999973 28999999999999999999999999998765
Q ss_pred ccccCCCCCccccceeccccccccccccCCCC----CCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGER----PSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMT 868 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 868 (929)
.... ......|+..|+|||++.+.. ++.++||||+|++++++.....++...... .+. +.....
T Consensus 166 ~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~----~~~~~~ 233 (296)
T cd06618 166 VDSK-------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-FEV----LTKILQ 233 (296)
T ss_pred cCCC-------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-HHH----HHHHhc
Confidence 3211 112235788999999987654 889999999998777765443333211110 000 111111
Q ss_pred ccchhhhhhh-HHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 869 SNESQTIQLH-DCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 869 ~~~~~~~~~~-~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
... ...... .+..++. +++.+||+.||++||++.++++.
T Consensus 234 ~~~-~~~~~~~~~~~~l~-~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 234 EEP-PSLPPNEGFSPDFC-SFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCC-CCCCCCCCCCHHHH-HHHHHHccCChhhCCCHHHHhcC
Confidence 100 000000 0112233 37779999999999999999754
No 385
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.92 E-value=3.4e-26 Score=245.36 Aligned_cols=227 Identities=23% Similarity=0.292 Sum_probs=159.4
Q ss_pred ecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEec
Q 002376 669 IGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFL 729 (929)
Q Consensus 669 iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~ 729 (929)
||+|+||.||+++... ..+.+.+|++++++++||||+++++.+.. ....|+||||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQG-----KKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheec-----CcEEEEEEecC
Confidence 6899999999988651 13467889999999999999999988743 33589999999
Q ss_pred CCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCC--
Q 002376 730 SNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQ-- 799 (929)
Q Consensus 730 ~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~-- 799 (929)
++++|.++++... .++.|++.||+|||+. +++||||+|+||++++++.+||+|||++..........
T Consensus 76 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 152 (265)
T cd05579 76 PGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLN 152 (265)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccc
Confidence 9999999886432 2367899999999998 99999999999999999999999999987543211100
Q ss_pred CCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhH
Q 002376 800 SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHD 879 (929)
Q Consensus 800 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 879 (929)
..........++..|+|||+..+..++.++||||+|++++++.....++..... .+..+. ... ..... +....
T Consensus 153 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--~~~~~~-~~~---~~~~~-~~~~~ 225 (265)
T cd05579 153 DDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP--EEIFQN-ILN---GKIEW-PEDVE 225 (265)
T ss_pred cccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH--HHHHHH-Hhc---CCcCC-Ccccc
Confidence 001122334688899999999888899999999999887776544333322111 111111 110 00000 00000
Q ss_pred HHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 002376 880 CLITIIGSVGLSCTTESPGGRIGIREALRRLK 911 (929)
Q Consensus 880 ~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 911 (929)
....+.+++.+||+.+|++|||+.++.+.|+
T Consensus 226 -~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 226 -VSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred -CCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 1222233777999999999999966655554
No 386
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.92 E-value=2.2e-26 Score=256.83 Aligned_cols=176 Identities=24% Similarity=0.355 Sum_probs=140.1
Q ss_pred HhhCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCC-CC
Q 002376 658 RATGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS-KN 718 (929)
Q Consensus 658 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-~~ 718 (929)
...++|+..+.||+|+||.||+|+... ..+.+.+|+.++++++|||++++++++...+. ..
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 346789999999999999999987641 12456689999999999999999998765432 22
Q ss_pred cceEEEEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
....++|+||+ +++|.+++...+ .++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARH 167 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccccccc
Confidence 23479999999 679988875422 3467899999999998 999999999999999999999999999986
Q ss_pred cccccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHH
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKW 846 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~ 846 (929)
.... .....++..|+|||++.+. .++.++||||+|++++++..+..
T Consensus 168 ~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~ 214 (343)
T cd07851 168 TDDE---------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKT 214 (343)
T ss_pred cccc---------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCC
Confidence 5211 2234678899999998653 67899999999988887655443
No 387
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=4.3e-26 Score=235.74 Aligned_cols=173 Identities=27% Similarity=0.315 Sum_probs=142.2
Q ss_pred CCCCceeecccCceeEEeccccCcHHHH-------------------HHHHHHHHcc-CCccccceeeecccCCCCCcce
Q 002376 662 NFSHENLIGSGSFGSVLHNERTGSWKSF-------------------IAECETLRNV-RHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~~~~~~-------------------~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
+|....+||+|+||+|..+..+++.+-+ +.|-++|+-- +-|.+|+++.++. ....
T Consensus 350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQ-----TmDR 424 (683)
T KOG0696|consen 350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQ-----TMDR 424 (683)
T ss_pred ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhh-----hhhh
Confidence 7888999999999999999888654432 2466666665 4678999998884 4555
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
+|+||||+.||+|.-++++.. .++.+||-||-|||++ +||.||+|..|||+|.+|.+||+|||+++.-
T Consensus 425 LyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn- 500 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN- 500 (683)
T ss_pred eeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccccccc-
Confidence 999999999999998887433 3477899999999998 9999999999999999999999999999832
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
......+..++||+-|+|||++...+|+.++|-|++|+.+||+..+.-++
T Consensus 501 -----i~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPF 550 (683)
T KOG0696|consen 501 -----IFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPF 550 (683)
T ss_pred -----ccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCC
Confidence 22233456789999999999999999999999999998877765544443
No 388
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.92 E-value=3.2e-25 Score=244.22 Aligned_cols=219 Identities=26% Similarity=0.324 Sum_probs=154.6
Q ss_pred CCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 663 FSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
|...+.||+|+||+||+|+... ..+.+.+|+++++.++|||++++++++.+. ...|
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 97 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE-----HTAW 97 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC-----CEEE
Confidence 4556789999999999987531 124678899999999999999999998653 3479
Q ss_pred EEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
+||||+. |++.+++.... .++.|++.|++|||+. +++||||||+||++++++.+||+|||++....
T Consensus 98 lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~- 172 (313)
T cd06633 98 LVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSS- 172 (313)
T ss_pred EEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccC-
Confidence 9999995 57777664321 2356899999999998 99999999999999999999999999986421
Q ss_pred ccCCCCCccccceeccccccccccccC---CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGL---GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
......|+..|+|||++. ...++.++||||+|++++++.....++..... ... +........
T Consensus 173 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~-~~~-----~~~~~~~~~ 237 (313)
T cd06633 173 ---------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-MSA-----LYHIAQNDS 237 (313)
T ss_pred ---------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-HHH-----HHHHHhcCC
Confidence 112346899999999974 45689999999999877765433222111110 000 000000000
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
. ... .......+++++.+||+.+|++||++.|++.
T Consensus 238 ~-~~~-~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 238 P-TLQ-SNEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred C-CCC-ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 000 0011122334777999999999999999985
No 389
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1e-26 Score=246.40 Aligned_cols=225 Identities=20% Similarity=0.274 Sum_probs=169.9
Q ss_pred cCCCCChHHHHHhhCCCCCceeecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCCccccce
Q 002376 647 CHPKISYDELRRATGNFSHENLIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRHRNLVKL 707 (929)
Q Consensus 647 ~~~~~~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~Hpniv~l 707 (929)
....+.++++++ ...+|-|+||.|-..+.. ++.+....|-.+|...+.|.||++
T Consensus 413 e~a~v~l~dl~~-------iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrL 485 (732)
T KOG0614|consen 413 EFAQVKLSDLKR-------IATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRL 485 (732)
T ss_pred hhcccchhhhhh-------hhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHH
Confidence 334455555544 467999999999655443 234456689999999999999999
Q ss_pred eeecccCCCCCcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC
Q 002376 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM 779 (929)
Q Consensus 708 ~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~ 779 (929)
|..| ++.+++|+.||-|-||.+...++++. .++..|.+|++|||+. +||.||+||+|.++|.+|
T Consensus 486 YrTf-----rd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~G 557 (732)
T KOG0614|consen 486 YRTF-----RDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRG 557 (732)
T ss_pred HHHh-----ccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCC
Confidence 9998 45567999999999999999998554 3456788999999998 999999999999999999
Q ss_pred ceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhc
Q 002376 780 TAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQV 858 (929)
Q Consensus 780 ~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~ 858 (929)
.+|+.|||+|+.+.. ...+..++||+.|.|||++..+..+.++|.|++|+++||+.++.-+++.... .....
T Consensus 558 y~KLVDFGFAKki~~-------g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ 630 (732)
T KOG0614|consen 558 YLKLVDFGFAKKIGS-------GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNL 630 (732)
T ss_pred ceEEeehhhHHHhcc-------CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHH
Confidence 999999999998742 2345678999999999999999999999999999888887666655554433 22222
Q ss_pred cChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCC
Q 002376 859 LDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIG 902 (929)
Q Consensus 859 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs 902 (929)
+-..+..+ ..+..+.+-..+++.+.+..+|.+|--
T Consensus 631 ILkGid~i---------~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 631 ILKGIDKI---------EFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred HHhhhhhh---------hcccccchhHHHHHHHHHhcCcHhhhc
Confidence 22222111 111122222333777888999999975
No 390
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.92 E-value=1.7e-25 Score=231.44 Aligned_cols=175 Identities=26% Similarity=0.338 Sum_probs=140.4
Q ss_pred hCCCCCceeecccCceeEEeccccCc---------------HHHHHHHHHHHHccC--Ccc----ccceeeecccCCCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTGS---------------WKSFIAECETLRNVR--HRN----LVKLITSCSSLDSKN 718 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~~---------------~~~~~~E~~~l~~l~--Hpn----iv~l~~~~~~~~~~~ 718 (929)
+++|.....+|+|+||+|.++++... .++.+-|+++++++. -|+ +|++.+++ .-
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF-----dy 162 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWF-----DY 162 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh-----hc
Confidence 67899999999999999998877632 334556999999993 233 77887777 44
Q ss_pred cceEEEEEEecCCCCcccccccc----------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC-----------
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGE----------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE----------- 777 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~----------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~----------- 777 (929)
.++.|+|+|.+ |-|++++++.. +.++.|++++++|||+. +++|-|+||+|||+.+
T Consensus 163 rghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~ 238 (415)
T KOG0671|consen 163 RGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKK 238 (415)
T ss_pred cCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCC
Confidence 55689999998 56999999753 34467999999999998 9999999999999832
Q ss_pred ---------CCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 778 ---------EMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 778 ---------~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
+..+||.|||-|+.-.+. ...++.|..|+|||++.+-.++.++||||+||++.|+.++...+
T Consensus 239 ~~~~~r~~ks~~I~vIDFGsAtf~~e~---------hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LF 309 (415)
T KOG0671|consen 239 KVCFIRPLKSTAIKVIDFGSATFDHEH---------HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLF 309 (415)
T ss_pred ccceeccCCCcceEEEecCCcceeccC---------cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceec
Confidence 235899999999864221 24467899999999999999999999999999999987777666
Q ss_pred hcCC
Q 002376 849 SNLP 852 (929)
Q Consensus 849 ~~~~ 852 (929)
...+
T Consensus 310 qtHe 313 (415)
T KOG0671|consen 310 QTHE 313 (415)
T ss_pred ccCC
Confidence 5544
No 391
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.92 E-value=8.2e-26 Score=245.05 Aligned_cols=167 Identities=26% Similarity=0.391 Sum_probs=135.3
Q ss_pred CCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 663 FSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
|+..+.||+|+||.||+|+... ..+.+.+|+.++++++|||++++++++.+. ...++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE-----RKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC-----CceEE
Confidence 4566789999999999987652 124677899999999999999999998643 34899
Q ss_pred EEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
||||++ ++|.+++... ..++.+++.|++|||+. +|+||||+|+||++++++.+||+|||.++.....
T Consensus 76 v~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~ 151 (282)
T cd07829 76 VFEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIP 151 (282)
T ss_pred EecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCC
Confidence 999997 5899988654 12367899999999998 9999999999999999999999999999865321
Q ss_pred cCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIV 844 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~ 844 (929)
.. ......++..|+|||++.+. .++.++|||++|++++++...
T Consensus 152 ~~------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~ 195 (282)
T cd07829 152 LR------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITG 195 (282)
T ss_pred cc------ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhC
Confidence 11 11223567889999998777 789999999999888776544
No 392
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.92 E-value=6.1e-26 Score=252.67 Aligned_cols=178 Identities=22% Similarity=0.293 Sum_probs=135.2
Q ss_pred CCCCC-ceeecccCceeEEeccccCc------------------------------HHHHHHHHHHHHccCCccccceee
Q 002376 661 GNFSH-ENLIGSGSFGSVLHNERTGS------------------------------WKSFIAECETLRNVRHRNLVKLIT 709 (929)
Q Consensus 661 ~~~~~-~~~iG~G~~g~Vy~~~~~~~------------------------------~~~~~~E~~~l~~l~Hpniv~l~~ 709 (929)
++|.. .+.||+|+||+||+|..... ...+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 34543 46799999999999975410 014678999999999999999999
Q ss_pred ecccCCCCCcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCce
Q 002376 710 SCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA 781 (929)
Q Consensus 710 ~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ 781 (929)
++... ...++||||++ |+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 88 ~~~~~-----~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~ 158 (335)
T PTZ00024 88 VYVEG-----DFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGIC 158 (335)
T ss_pred EEecC-----CcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCE
Confidence 98543 35899999996 68988875322 2367899999999997 99999999999999999999
Q ss_pred EEeccccccccccccCCC--------CCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCcchhHHh
Q 002376 782 KVGDFGLARFLLERVDNQ--------SSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEFNIVKWV 847 (929)
Q Consensus 782 ki~DfGla~~~~~~~~~~--------~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~~~~~~~ 847 (929)
|++|||+++......... ..........+++.|+|||++.+.. ++.++||||+|++++++.....+
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p 233 (335)
T PTZ00024 159 KIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPL 233 (335)
T ss_pred EECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 999999998653110000 0011112335788999999987654 79999999999888876554433
No 393
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.92 E-value=9.2e-26 Score=271.27 Aligned_cols=122 Identities=32% Similarity=0.465 Sum_probs=105.9
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|...++||+|+||.||+|++.. ..+.+.+|+.+++.++||||+++++++.. ...
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-----~~~ 78 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS-----ANN 78 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE-----CCE
Confidence 578889999999999999987651 12567889999999999999999988743 345
Q ss_pred EEEEEEecCCCCcccccccc--------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGE--------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~--------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
.|+||||+++|+|.++++.. +.++.||+.||+|||+. +||||||||+|||++.++.+||+|||+++
T Consensus 79 ~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 79 VYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 89999999999999988632 23467899999999998 99999999999999999999999999986
No 394
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.92 E-value=9.7e-26 Score=226.53 Aligned_cols=244 Identities=21% Similarity=0.207 Sum_probs=168.4
Q ss_pred ChHHHHHhhCCCCCceeecccCceeEEecccc----------------CcHHHHHHHHHHHHccC-CccccceeeecccC
Q 002376 652 SYDELRRATGNFSHENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNVR-HRNLVKLITSCSSL 714 (929)
Q Consensus 652 ~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~ 714 (929)
+++|+-+-|+ +.+|+|+|+.|-.+... -.+.+..+|++++.+.+ |+||++++++|.+
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd- 147 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFED- 147 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc-
Confidence 4677777663 78999999999654432 13567889999999995 9999999999954
Q ss_pred CCCCcceEEEEEEecCCCCcccccccccc--------ccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC---ceEE
Q 002376 715 DSKNMEFLALVYEFLSNGSLGDWIHGERK--------NELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM---TAKV 783 (929)
Q Consensus 715 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~--------~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~---~~ki 783 (929)
...+|+|||-|.||.|..++++++. +..+||.||.|||.. +|.|||+||+|||..+.. -+||
T Consensus 148 ----d~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKi 220 (463)
T KOG0607|consen 148 ----DTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKI 220 (463)
T ss_pred ----cceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceee
Confidence 3348999999999999999976553 357899999999998 999999999999996543 4799
Q ss_pred eccccccccccccCC-CCCccccceeccccccccccccC-----CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc---h
Q 002376 784 GDFGLARFLLERVDN-QSSISSTHVFMGSIGYVPPEYGL-----GERPSTAGDVPTSESFAGEFNIVKWVESNLPE---N 854 (929)
Q Consensus 784 ~DfGla~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~---~ 854 (929)
+||-++.-+....+- ..........+|+..|||||+.. ...|+.++|.||+|+++|-|.-+..++...-. .
T Consensus 221 CDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCG 300 (463)
T KOG0607|consen 221 CDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCG 300 (463)
T ss_pred eccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCC
Confidence 999887654322111 11112234568999999999753 23589999999999887765444443322211 1
Q ss_pred hh-----hccChHHHHhhcc-cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 855 VL-----QVLDPELRQLMTS-NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 855 ~~-----~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
+. .+-...+.+.+.+ ..+.+...|.-++...++++...+..|+.+|-++.+++.
T Consensus 301 WdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 301 WDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred ccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 11 1111112211111 111222233445666666788888899999999988876
No 395
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=1.4e-23 Score=266.63 Aligned_cols=344 Identities=22% Similarity=0.318 Sum_probs=228.1
Q ss_pred CCCCCCCCCCEEEeecCC------CCCCCCcCCCCCC-CCcEEeCCCCCCCCCcccccccccccceecccccccCCCCCh
Q 002376 89 PHIGNLSFLRSIQLQNNK------LSGNLPREIGNLF-RLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTD 161 (929)
Q Consensus 89 ~~l~~L~~L~~L~Ls~N~------l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~ 161 (929)
..|..+++|+.|.+..+. +...+|..|..++ +|+.|++.+|.+. .+|..| ...+|++|+|++|++. .++.
T Consensus 552 ~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~ 628 (1153)
T PLN03210 552 NAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWD 628 (1153)
T ss_pred HHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cccc
Confidence 458889999999997764 3446788887764 6999999999987 678777 5789999999999997 6766
Q ss_pred hhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCC
Q 002376 162 DQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIP 241 (929)
Q Consensus 162 ~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip 241 (929)
. +..+++|+.|+|++|...+.+| .++.+++|+.|+|++|..-..+|..+.++++|++|++++|..-+.+|
T Consensus 629 ~-~~~l~~Lk~L~Ls~~~~l~~ip---------~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp 698 (1153)
T PLN03210 629 G-VHSLTGLRNIDLRGSKNLKEIP---------DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILP 698 (1153)
T ss_pred c-cccCCCCCEEECCCCCCcCcCC---------ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccC
Confidence 6 7889999999999876544444 35678999999999988777889999999999999999976555788
Q ss_pred cccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccc
Q 002376 242 YDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFI 321 (929)
Q Consensus 242 ~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~ 321 (929)
..+ .+++|+.|++++|...+.+|.. ..+|+.|++++|.++ .+|..+ .+++|+.|++..+.......
T Consensus 699 ~~i--~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~------- 764 (1153)
T PLN03210 699 TGI--NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWE------- 764 (1153)
T ss_pred CcC--CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccc-------
Confidence 765 4788888888888766666643 357788888888876 455544 46667777665533211100
Q ss_pred cccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCC
Q 002376 322 TSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQ 401 (929)
Q Consensus 322 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 401 (929)
.+. .++......+.+|+.|+|++|...+.+|.+++++++|+.|+|++|..-+.+|..+ .++
T Consensus 765 -----------------~~~-~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~ 825 (1153)
T PLN03210 765 -----------------RVQ-PLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLE 825 (1153)
T ss_pred -----------------ccc-ccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-Ccc
Confidence 000 0111111122246666666665555556666666666666666554333455444 456
Q ss_pred CCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccC-CcCCCCCCCCcccCCchhhhcc
Q 002376 402 GLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSN-NRINGNIPKGILRPLPEEISRL 480 (929)
Q Consensus 402 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~i~~~~~~~~p~~~~~l 480 (929)
+|+.|++++|..-..+|.. .++|+.|+|++|.++ .+|.++..+++|+.|+|++ |+++ .+ |..+..+
T Consensus 826 sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l--------~~~~~~L 892 (1153)
T PLN03210 826 SLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RV--------SLNISKL 892 (1153)
T ss_pred ccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-cc--------Ccccccc
Confidence 6666666665433333332 245666666666665 4566666666666666665 3333 12 3444556
Q ss_pred cCccEEEecCC
Q 002376 481 ENVVTIDLSDN 491 (929)
Q Consensus 481 ~~L~~LdLs~N 491 (929)
+.|+.++++++
T Consensus 893 ~~L~~L~l~~C 903 (1153)
T PLN03210 893 KHLETVDFSDC 903 (1153)
T ss_pred cCCCeeecCCC
Confidence 66666666665
No 396
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.91 E-value=3.2e-25 Score=235.81 Aligned_cols=213 Identities=28% Similarity=0.329 Sum_probs=155.0
Q ss_pred ecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEec
Q 002376 669 IGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFL 729 (929)
Q Consensus 669 iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~ 729 (929)
||+|+||.||++.... ..+.+..|+.++++++||||+++++++.. ....++||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQT-----EEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeec-----CCeeEEEEecC
Confidence 6999999999887541 23368889999999999999999998843 34589999999
Q ss_pred CCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCC
Q 002376 730 SNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSS 801 (929)
Q Consensus 730 ~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 801 (929)
++++|.+++.... ....|++.|+.|+|+. +++|+||||+||++++++.++|+|||++.......
T Consensus 76 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~----- 147 (250)
T cd05123 76 PGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG----- 147 (250)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC-----
Confidence 9999999886432 2256899999999997 99999999999999999999999999988653211
Q ss_pred ccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHHH
Q 002376 802 ISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCL 881 (929)
Q Consensus 802 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 881 (929)
.......|+..|+|||...+...+.++|||++|++++++.....++..... .+. .......... .+...
T Consensus 148 -~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--~~~----~~~~~~~~~~----~~~~~ 216 (250)
T cd05123 148 -SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--KEI----YEKILKDPLR----FPEFL 216 (250)
T ss_pred -CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHH----HHHHhcCCCC----CCCCC
Confidence 112334688999999999888899999999999877665443333221111 000 1111111111 11111
Q ss_pred HHHHHHHhccccCCCCCCCCCHHH
Q 002376 882 ITIIGSVGLSCTTESPGGRIGIRE 905 (929)
Q Consensus 882 ~~~~~~l~~~Cl~~dP~~RPs~~e 905 (929)
...+.+++.+||..||++||++++
T Consensus 217 ~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 217 SPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CHHHHHHHHHHhcCCHhhCCCccc
Confidence 222233777999999999999955
No 397
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.91 E-value=3.1e-25 Score=252.95 Aligned_cols=243 Identities=21% Similarity=0.258 Sum_probs=153.4
Q ss_pred HhhCCCCCceeecccCceeEEecccc--------------------------------CcHHHH--------------HH
Q 002376 658 RATGNFSHENLIGSGSFGSVLHNERT--------------------------------GSWKSF--------------IA 691 (929)
Q Consensus 658 ~~~~~~~~~~~iG~G~~g~Vy~~~~~--------------------------------~~~~~~--------------~~ 691 (929)
...++|+..++||+|+||.||+|... +..++| ..
T Consensus 142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 35779999999999999999998531 011223 34
Q ss_pred HHHHHHccCCccc-----cceeeecccCCC---CCcceEEEEEEecCCCCccccccccc---------------------
Q 002376 692 ECETLRNVRHRNL-----VKLITSCSSLDS---KNMEFLALVYEFLSNGSLGDWIHGER--------------------- 742 (929)
Q Consensus 692 E~~~l~~l~Hpni-----v~l~~~~~~~~~---~~~~~~~lV~e~~~~gsL~~~l~~~~--------------------- 742 (929)
|+.++.+++|.++ ++++++|..... ...+..++||||+++|+|.++++...
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 6667777766554 678888764321 12345799999999999998886311
Q ss_pred -----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCCccccceeccc
Q 002376 743 -----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGS 811 (929)
Q Consensus 743 -----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt 811 (929)
.++.|++.||+|+|+. +|+||||||+||+++.++.+||+|||+++.+.... ........+|
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~-----~~~~~~g~~t 373 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI-----NFNPLYGMLD 373 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCC-----ccCccccCCC
Confidence 1245789999999998 89999999999999999999999999997653211 0111123458
Q ss_pred cccccccccCCCCC----------------------CCCCCCCCCcCCCCCcchhHH-hhhcCCc--hhhhccChHHHHh
Q 002376 812 IGYVPPEYGLGERP----------------------STAGDVPTSESFAGEFNIVKW-VESNLPE--NVLQVLDPELRQL 866 (929)
Q Consensus 812 ~~y~aPE~~~~~~~----------------------~~~~DV~s~g~~~~~~~~~~~-~~~~~~~--~~~~~~~~~l~~~ 866 (929)
+.|+|||.+..... ..+.||||+|++++++..... ++..... ...+..+..+..+
T Consensus 374 p~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~ 453 (507)
T PLN03224 374 PRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRW 453 (507)
T ss_pred cceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHH
Confidence 89999998764321 234799999988777654332 1110000 0000011111100
Q ss_pred h-cccchhhhhhhHHHHHHHHHHhccccCCCC---CCCCCHHHHHH
Q 002376 867 M-TSNESQTIQLHDCLITIIGSVGLSCTTESP---GGRIGIREALR 908 (929)
Q Consensus 867 ~-~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP---~~RPs~~ev~~ 908 (929)
. ...........+.......+++.+++..+| .+|+|++|+++
T Consensus 454 r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 454 RMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred HhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 0 000111111112233344457778888766 68999999974
No 398
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.91 E-value=1e-25 Score=246.64 Aligned_cols=227 Identities=24% Similarity=0.309 Sum_probs=162.7
Q ss_pred hhCCCCCceeecccCceeEEeccccCc----------------HHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTGS----------------WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~----------------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
..++|....++|+|+||.|||+++... .+-...|+-+++..+|||||.++|.|...+. .
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dk-----l 87 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDK-----L 87 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcC-----c
Confidence 346788899999999999999998732 2334579999999999999999999865443 7
Q ss_pred EEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
|+.||||.+|+|++..+... ....+..+|++|||+. +=+|||||-.|||+.+.|.+|++|||.+..+..
T Consensus 88 wicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 88 WICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITA 164 (829)
T ss_pred EEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhh
Confidence 99999999999999877433 2245677899999998 889999999999999999999999999886632
Q ss_pred ccCCCCCccccceecccccccccccc---CCCCCCCCCCCCCCcCCCCCcchhHHh-hhcCCchhhhccChHHHHhhccc
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYG---LGERPSTAGDVPTSESFAGEFNIVKWV-ESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DV~s~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
.......+.||+.|||||+. +.+.|..++|||+.|+.+.|..-.+-+ +...|......+.. .
T Consensus 165 ------ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTk--------S 230 (829)
T KOG0576|consen 165 ------TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTK--------S 230 (829)
T ss_pred ------hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhc--------c
Confidence 23344568999999999975 345699999999999887763211100 11111111111111 1
Q ss_pred chhhhhhhH--HHHHHHHHHhccccCCCCCCCCCHHHHH
Q 002376 871 ESQTIQLHD--CLITIIGSVGLSCTTESPGGRIGIREAL 907 (929)
Q Consensus 871 ~~~~~~~~~--~~~~~~~~l~~~Cl~~dP~~RPs~~ev~ 907 (929)
..+.+...+ .-.+...++++.|+..+|++||++.-.+
T Consensus 231 ~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL 269 (829)
T KOG0576|consen 231 GFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLL 269 (829)
T ss_pred CCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhe
Confidence 111111000 0122333466699999999999987654
No 399
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.91 E-value=5.5e-26 Score=215.34 Aligned_cols=175 Identities=22% Similarity=0.309 Sum_probs=133.9
Q ss_pred CCCceeecccCceeEEecccc-----------------CcHHHHHHHHHHHHc-cCCccccceeeecccCCCCCcceEEE
Q 002376 663 FSHENLIGSGSFGSVLHNERT-----------------GSWKSFIAECETLRN-VRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~-----------------~~~~~~~~E~~~l~~-l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
......||+|+||.|-+.++. +..++..+|+.+..+ ...|.+|.++|.++... .+++
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg-----dvwI 122 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG-----DVWI 122 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc-----cEEE
Confidence 334577999999998554433 234567788887555 47999999999875433 3899
Q ss_pred EEEecCCCCcccccccc------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 725 VYEFLSNGSLGDWIHGE------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.||.|. .||..+.++. .+++..|..||.|||++. .+||||+||+||||+.+|++||||||.+..+
T Consensus 123 cME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L 199 (282)
T KOG0984|consen 123 CMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYL 199 (282)
T ss_pred eHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceee
Confidence 999995 5777665421 244677899999999975 8999999999999999999999999999876
Q ss_pred ccccCCCCCccccceeccccccccccccCCC----CCCCCCCCCCCcCCCCCcchhHHhhhcCC
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGE----RPSTAGDVPTSESFAGEFNIVKWVESNLP 852 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DV~s~g~~~~~~~~~~~~~~~~~ 852 (929)
... ...+...|.-.|||||.+..+ .|+.|+||||+|+.+.|+.+..++.....
T Consensus 200 ~dS-------iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 200 VDS-------IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred hhh-------hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence 422 122334688899999987643 59999999999999888877766655443
No 400
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=5.1e-26 Score=223.54 Aligned_cols=177 Identities=27% Similarity=0.355 Sum_probs=138.6
Q ss_pred CCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 663 FSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
.+..+.||-|+||+||...++. ..+.+.+|++++..++|.||+..+++..-.....-+++|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 3456889999999999776652 2356789999999999999999988875544333456799
Q ss_pred EEEecCCCCcccccccc--------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGE--------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~--------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 796 (929)
|+|.|. .+|.+.+-.. +.+..||.+||.|||+. +|.||||||.|.|++.+...||||||+||....+
T Consensus 135 ~TELmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d- 209 (449)
T KOG0664|consen 135 LTELMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQR- 209 (449)
T ss_pred HHHHHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccchh-
Confidence 999994 5787766422 23467999999999998 9999999999999999999999999999975432
Q ss_pred CCCCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCcchhHHhh
Q 002376 797 DNQSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
.....+..+-|..|+|||+++|.+ |+.+.||||.||+..|+.-....+
T Consensus 210 ----~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILF 258 (449)
T KOG0664|consen 210 ----DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILF 258 (449)
T ss_pred ----hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhh
Confidence 112234456789999999999865 899999999998866654444433
No 401
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=4.3e-23 Score=262.08 Aligned_cols=345 Identities=22% Similarity=0.273 Sum_probs=218.6
Q ss_pred CChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCC-CcccEEEeecccCCCccCCccccCCCCceEEeeecCCC
Q 002376 159 VTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRL-ENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLG 237 (929)
Q Consensus 159 i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 237 (929)
+...+|.++++|+.|.+.++..... ..+..-+|..|..+ .+|+.|++.+|.+. .+|..| ...+|++|+|++|++.
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~--~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~ 624 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQK--KEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE 624 (1153)
T ss_pred ecHHHHhcCccccEEEEeccccccc--ccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc
Confidence 4556688888888888876643210 01111244555555 35888888888886 556666 5688889999988887
Q ss_pred CcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceecccccc-ccCCCCCC
Q 002376 238 GEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNK-IVSSGDDE 316 (929)
Q Consensus 238 ~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-i~~~~~~~ 316 (929)
.+|..+.. +++|+.++++++...+.+|. +..+++|+.|+|++|..-..+|..++++++|+.|++++|. +..++.
T Consensus 625 -~L~~~~~~-l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~-- 699 (1153)
T PLN03210 625 -KLWDGVHS-LTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPT-- 699 (1153)
T ss_pred -cccccccc-CCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCC--
Confidence 67766644 88888888888766566664 7788888899998877666788888888888888888753 433321
Q ss_pred CCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCC------
Q 002376 317 GLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSIS------ 390 (929)
Q Consensus 317 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~------ 390 (929)
..++++|++|+|++|...+.+|.. ..+|+.|+|++|.+. .+|..+ .+++|+.|++.++...
T Consensus 700 -------~i~l~sL~~L~Lsgc~~L~~~p~~----~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~ 766 (1153)
T PLN03210 700 -------GINLKSLYRLNLSGCSRLKSFPDI----STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERV 766 (1153)
T ss_pred -------cCCCCCCCEEeCCCCCCccccccc----cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccc
Confidence 125778888888888665555542 236888888888876 455554 5677777777764321
Q ss_pred -cccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCc
Q 002376 391 -GEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGI 469 (929)
Q Consensus 391 -~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~ 469 (929)
...+..+...++|+.|+|++|...+.+|..+.++++|+.|+|++|..-+.+|..+ ++++|+.|++++|..-..+
T Consensus 767 ~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~---- 841 (1153)
T PLN03210 767 QPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTF---- 841 (1153)
T ss_pred cccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccc----
Confidence 1112222234566666666666555666666666666666666654333455544 5666666666665432222
Q ss_pred ccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeeccc-ccccccCCccccCCCCCCEEECCCC
Q 002376 470 LRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAY-NQFSGPIPNIVAELKGLEVLDLSSN 539 (929)
Q Consensus 470 ~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N 539 (929)
|. ..++|+.|+|++|.++ .+|.++..+++|+.|+|++ |+++ .+|..+..+++|+.|+++++
T Consensus 842 ----p~---~~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 842 ----PD---ISTNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred ----cc---cccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCC
Confidence 21 1235666666666665 4555666666666666665 3344 34445555666666666555
No 402
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.91 E-value=2.9e-25 Score=234.27 Aligned_cols=204 Identities=22% Similarity=0.135 Sum_probs=146.9
Q ss_pred cCceeEEeccccCc-----------HHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEecCCCCccccccc
Q 002376 672 GSFGSVLHNERTGS-----------WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG 740 (929)
Q Consensus 672 G~~g~Vy~~~~~~~-----------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~ 740 (929)
|.||+||++++..+ ...+.+|...+....||||+++++++.+. ...++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSEYSRERLTIIPHCVPNMVCLHKYIVSE-----DSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhhhhhHHHHHHhcCCCceeehhhheecC-----CeEEEEEecCCCCCHHHHHHH
Confidence 78999998877522 22455676666667899999999998543 358999999999999998754
Q ss_pred cc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCCccccceecccc
Q 002376 741 ER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSI 812 (929)
Q Consensus 741 ~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~ 812 (929)
.. .++.|++.||+|+|+. +|+||||||+||+++.++.+|++|||.+...... .....++.
T Consensus 79 ~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---------~~~~~~~~ 146 (237)
T cd05576 79 FLNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---------CDGEAVEN 146 (237)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc---------cccCCcCc
Confidence 32 2357899999999997 9999999999999999999999999988754321 11234577
Q ss_pred ccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccc
Q 002376 813 GYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSC 892 (929)
Q Consensus 813 ~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 892 (929)
.|+|||+..+..++.++||||+|++++++.....+....+.......... .+..+..-+++++.+|
T Consensus 147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~li~~~ 212 (237)
T cd05576 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGINTHTTLN--------------IPEWVSEEARSLLQQL 212 (237)
T ss_pred cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcccccccC--------------CcccCCHHHHHHHHHH
Confidence 89999999888899999999999888876554433322221110000000 0001112223377799
Q ss_pred cCCCCCCCCCHHHH
Q 002376 893 TTESPGGRIGIREA 906 (929)
Q Consensus 893 l~~dP~~RPs~~ev 906 (929)
++.||++||++.+.
T Consensus 213 l~~dp~~R~~~~~~ 226 (237)
T cd05576 213 LQFNPTERLGAGVA 226 (237)
T ss_pred ccCCHHHhcCCCcc
Confidence 99999999997443
No 403
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.90 E-value=1.2e-25 Score=232.54 Aligned_cols=405 Identities=21% Similarity=0.229 Sum_probs=244.0
Q ss_pred ceeeCCCCC---------cEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCC-CCCC
Q 002376 63 GVICNNFGN---------RVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISF-NNLQ 132 (929)
Q Consensus 63 gv~c~~~~~---------~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~ 132 (929)
-|.|+..+- ..++++|..|+++...|.+|..+++|+.||||+|+|+.+-|++|.+|.+|..|-+-+ |+|+
T Consensus 50 ~VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~ 129 (498)
T KOG4237|consen 50 IVDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT 129 (498)
T ss_pred eEEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh
Confidence 367887542 567999999999966566899999999999999999999999999999998886665 9999
Q ss_pred CCcccccccccccceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccC
Q 002376 133 GELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRL 212 (929)
Q Consensus 133 ~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l 212 (929)
...-..|++|..|+.|.+.-|++. -++.++|..|++|..|.+..|.+. .+.-..|..+..++.+.+..|.+
T Consensus 130 ~l~k~~F~gL~slqrLllNan~i~-Cir~~al~dL~~l~lLslyDn~~q--------~i~~~tf~~l~~i~tlhlA~np~ 200 (498)
T KOG4237|consen 130 DLPKGAFGGLSSLQRLLLNANHIN-CIRQDALRDLPSLSLLSLYDNKIQ--------SICKGTFQGLAAIKTLHLAQNPF 200 (498)
T ss_pred hhhhhHhhhHHHHHHHhcChhhhc-chhHHHHHHhhhcchhcccchhhh--------hhccccccchhccchHhhhcCcc
Confidence 777789999999999999999998 788899999999999999999862 22334788999999999999983
Q ss_pred C------------CccCCccccCCCCceEEeeecCCCCcCCc-ccccCCCCcceeeccCCcCCCCCC-CcccccccccEE
Q 002376 213 A------------GTVPSTIYNMTSLVHLRLASNQLGGEIPY-DVRDTLPNLLDFIYCFNRFTGKIP-GSLHNLTNIQII 278 (929)
Q Consensus 213 ~------------~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~-~~~~~l~~L~~l~l~~N~l~~~~p-~~~~~l~~L~~L 278 (929)
. -..|..++...-..-..|.++++. .++. .+...+..+..-..+.+..-++-| ..|..+++|+.|
T Consensus 201 icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~-q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~l 279 (498)
T KOG4237|consen 201 ICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRIN-QEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKL 279 (498)
T ss_pred ccccccchhhhHHhhchhhcccceecchHHHHHHHhc-ccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEe
Confidence 2 223333444333333334444443 1221 111111111111111222222222 235555566666
Q ss_pred eccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEE
Q 002376 279 RMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKL 358 (929)
Q Consensus 279 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L 358 (929)
+|++|+|+++-+.+|..+..++.|.|..|+|..+.. ..|.++. .|+.|
T Consensus 280 nlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~-------~~f~~ls-------------------------~L~tL 327 (498)
T KOG4237|consen 280 NLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSS-------GMFQGLS-------------------------GLKTL 327 (498)
T ss_pred ccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHH-------Hhhhccc-------------------------cceee
Confidence 666666655555555555555555555555443322 2233333 45556
Q ss_pred EecCCccccccCCCCCCCCcccEEEeeCCCCCccc-Ccccc---------------CCCCCCEEEecCCcCCCC---Ccc
Q 002376 359 YLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEI-PIEIG---------------QLQGLQVLGLAGNEIPGG---IPN 419 (929)
Q Consensus 359 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~---------------~l~~L~~L~L~~N~l~~~---~p~ 419 (929)
+|.+|+|+..-|.+|..+.+|.+|+|-.|.+.-.- -.|++ .-..++.+.++.+.+... .|+
T Consensus 328 ~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~e 407 (498)
T KOG4237|consen 328 SLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPE 407 (498)
T ss_pred eecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCCCCCCchhccccchhccccccccCCcc
Confidence 66666665555666666666666666555443110 00111 111233333333332210 111
Q ss_pred cccCCCCCceecccCcccccccCccccccccccee-cccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCC
Q 002376 420 SLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSI-DLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLP 498 (929)
Q Consensus 420 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L-~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p 498 (929)
..+.. -++.-| ..++.+.+. .-|++.+ ..+|+++ |. ..++|++.+|.++ .+|
T Consensus 408 e~~~~------------~s~~cP---~~c~c~~tVvRcSnk~l-k~lp~~i----P~------d~telyl~gn~~~-~vp 460 (498)
T KOG4237|consen 408 ELGCL------------TSSPCP---PPCTCLDTVVRCSNKLL-KLLPRGI----PV------DVTELYLDGNAIT-SVP 460 (498)
T ss_pred ccCCC------------CCCCCC---CCcchhhhhHhhcccch-hhcCCCC----Cc------hhHHHhcccchhc-ccC
Confidence 10000 000011 123334333 3333333 3555443 43 3456778888887 566
Q ss_pred cchhcCcCcceeecccccccccCCccccCCCCCCEEECCCC
Q 002376 499 NSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSN 539 (929)
Q Consensus 499 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 539 (929)
.. .+++| .+|+++|+++..-...|.+++.|.+|-||+|
T Consensus 461 ~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 461 DE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred HH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 65 56677 8888888888777778888888888888876
No 404
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.90 E-value=2e-24 Score=242.95 Aligned_cols=224 Identities=26% Similarity=0.293 Sum_probs=157.7
Q ss_pred CCCceeecccCcee-EEeccccCc---HH--------HHHHHHHHHHcc-CCccccceeeecccCCCCCcceEEEEEEec
Q 002376 663 FSHENLIGSGSFGS-VLHNERTGS---WK--------SFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVYEFL 729 (929)
Q Consensus 663 ~~~~~~iG~G~~g~-Vy~~~~~~~---~~--------~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~ 729 (929)
|...+++|.|+.|. ||+|.+.+. .+ ...+|+..++.- +|||||++++.- +..++.|+..|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E-----~d~qF~YIalELC 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSE-----QDRQFLYIALELC 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeCCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeec-----cCCceEEEEehHh
Confidence 44557889998875 588887643 12 234799998888 599999988764 4556799999999
Q ss_pred CCCCcccccccc-c-----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC---C--CceEEecccccccc
Q 002376 730 SNGSLGDWIHGE-R-----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE---E--MTAKVGDFGLARFL 792 (929)
Q Consensus 730 ~~gsL~~~l~~~-~-----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~---~--~~~ki~DfGla~~~ 792 (929)
. .+|.++++.. . ....|++.|+++||+. +|||||+||.||||+. + .+++|+|||+++.+
T Consensus 586 ~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 586 A-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred h-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 5 5999998752 1 1245799999999997 9999999999999975 3 47999999999988
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchh-HHhhhcCCchhhhccChHHHHhhcccc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIV-KWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
..+..+- .......||-||+|||++...+-+.++||+|+||+.|..... .-+++..-++-..++.-. ... ..
T Consensus 662 ~~~~sS~---~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~-~~L---~~ 734 (903)
T KOG1027|consen 662 AGGKSSF---SRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGN-YTL---VH 734 (903)
T ss_pred CCCcchh---hcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCc-cce---ee
Confidence 6543322 224556899999999999999999999999999987764332 222221111111111100 000 00
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREAL 907 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~ 907 (929)
- ....++ ..++|+.++++++|..||++.+|+
T Consensus 735 L--~~~~d~---eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 735 L--EPLPDC---EAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred e--ccCchH---HHHHHHHHhcCCCcccCCCHHHHh
Confidence 0 001112 233488899999999999999986
No 405
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=1.5e-24 Score=235.07 Aligned_cols=189 Identities=24% Similarity=0.310 Sum_probs=146.1
Q ss_pred ChHHHHHhh---CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceee
Q 002376 652 SYDELRRAT---GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLIT 709 (929)
Q Consensus 652 ~~~~l~~~~---~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~ 709 (929)
.|-.|++|. .-|...+.||-|+||+|..++... .....++|-.+|+.-+.+.||+|+.
T Consensus 617 nYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 617 NYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYY 696 (1034)
T ss_pred hHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEE
Confidence 344555554 347788999999999998765431 2234567999999999999999999
Q ss_pred ecccCCCCCcceEEEEEEecCCCCcccccccc--------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCce
Q 002376 710 SCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTA 781 (929)
Q Consensus 710 ~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~--------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ 781 (929)
.|.+.+ .+|+||||++||++..+|-+. |.+..+++.|+++.|.. |+|||||||.|||||.+|.+
T Consensus 697 SFQDkd-----nLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHI 768 (1034)
T KOG0608|consen 697 SFQDKD-----NLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHI 768 (1034)
T ss_pred EeccCC-----ceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCce
Confidence 885544 499999999999999887532 34456788999999987 99999999999999999999
Q ss_pred EEeccccccccc---------cccCCCC---------------------------CccccceeccccccccccccCCCCC
Q 002376 782 KVGDFGLARFLL---------ERVDNQS---------------------------SISSTHVFMGSIGYVPPEYGLGERP 825 (929)
Q Consensus 782 ki~DfGla~~~~---------~~~~~~~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~ 825 (929)
|+.|||++.-+. +...... ........+||+.|+|||++....|
T Consensus 769 KLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~ 848 (1034)
T KOG0608|consen 769 KLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGY 848 (1034)
T ss_pred eeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCc
Confidence 999999986321 0000000 0001234579999999999999999
Q ss_pred CCCCCCCCCcCCCCCcchhHHhh
Q 002376 826 STAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 826 ~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
+..+|-||.|+++|||.++.-++
T Consensus 849 ~q~cdwws~gvil~em~~g~~pf 871 (1034)
T KOG0608|consen 849 TQLCDWWSVGVILYEMLVGQPPF 871 (1034)
T ss_pred cccchhhHhhHHHHHHhhCCCCc
Confidence 99999999999988876665554
No 406
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=3.6e-23 Score=243.63 Aligned_cols=265 Identities=25% Similarity=0.328 Sum_probs=152.8
Q ss_pred CCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhccCCCCcEEEcc
Q 002376 97 LRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFG 176 (929)
Q Consensus 97 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls 176 (929)
-..|+|++|.|+ .+|+.+. .+|+.|++++|+|+. +|.. +++|++|+|++|+|+ .+|.. .++|+.|+|+
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~l---p~~Lk~LdLs~N~Lt-sLP~l----p~sL~~L~Ls 270 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPAL---PPELRTLEVSGNQLT-SLPVL----PPGLLELSIF 270 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCCC---CCCCcEEEecCCccC-cccCc----ccccceeecc
Confidence 456666666666 5666554 356666666666663 4432 356666666666666 44431 2456666666
Q ss_pred ccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeec
Q 002376 177 KNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIY 256 (929)
Q Consensus 177 ~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l 256 (929)
+|.++. +| . ..++|+.|+|++|+|+. +|.. .++|++|+|++|+|+ .+|.. ..+|..|++
T Consensus 271 ~N~L~~-Lp--------~---lp~~L~~L~Ls~N~Lt~-LP~~---p~~L~~LdLS~N~L~-~Lp~l----p~~L~~L~L 329 (788)
T PRK15387 271 SNPLTH-LP--------A---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLA-SLPAL----PSELCKLWA 329 (788)
T ss_pred CCchhh-hh--------h---chhhcCEEECcCCcccc-cccc---ccccceeECCCCccc-cCCCC----ccccccccc
Confidence 665532 11 1 11345566666666653 2321 345666666666665 23321 123444444
Q ss_pred cCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEcc
Q 002376 257 CFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALD 336 (929)
Q Consensus 257 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls 336 (929)
++|++++ +|.. ..+|+.|+|++|+|++ +|.. ..+|+.|+++
T Consensus 330 s~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l----------------------------------p~~L~~L~Ls 370 (788)
T PRK15387 330 YNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL----------------------------------PSELYKLWAY 370 (788)
T ss_pred ccCcccc-cccc---ccccceEecCCCccCC-CCCC----------------------------------Ccccceehhh
Confidence 4444443 2221 1244555555555542 2211 1345566666
Q ss_pred CCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCC
Q 002376 337 GNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGG 416 (929)
Q Consensus 337 ~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 416 (929)
+|+|+ .+|... .+|+.|+|++|+|++ +|.. .++|+.|++++|+|++ +|.. ..+|+.|++++|+|+ .
T Consensus 371 ~N~L~-~LP~l~----~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~ 436 (788)
T PRK15387 371 NNRLT-SLPALP----SGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-R 436 (788)
T ss_pred ccccc-cCcccc----cccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-c
Confidence 66666 355422 257777777777774 4433 2567788888888874 5543 245777888888887 5
Q ss_pred CcccccCCCCCceecccCcccccccCccccc
Q 002376 417 IPNSLANLKKLNQIDLSGNELTGEIPISFGN 447 (929)
Q Consensus 417 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 447 (929)
+|..+.++++|+.|+|++|+|++..+..+..
T Consensus 437 LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~ 467 (788)
T PRK15387 437 LPESLIHLSSETTVNLEGNPLSERTLQALRE 467 (788)
T ss_pred cChHHhhccCCCeEECCCCCCCchHHHHHHH
Confidence 7888888888888888888888776665533
No 407
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=2.6e-24 Score=217.02 Aligned_cols=175 Identities=25% Similarity=0.291 Sum_probs=141.8
Q ss_pred hCCCCCceeecccCceeEEeccccCc-------------------HHHHHHHHHHHHcc-CCccccceeeecccCCCCCc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTGS-------------------WKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~~-------------------~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~ 719 (929)
.++|+..++||+|+|.+|..++.+++ ..-...|..+..+. +||.+|.++.+|. ..
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfq-----te 323 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQ-----TE 323 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhc-----cc
Confidence 45788999999999999988776532 12234566566554 7999999998883 44
Q ss_pred ceEEEEEEecCCCCcccccccccc--------ccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGERK--------NELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~~--------~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..+++|.||+++|+|.-+++++|+ +..+|+.||.|||++ +||.||+|..|||+|..|.+|+.|+|+++.
T Consensus 324 srlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke 400 (593)
T KOG0695|consen 324 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKE 400 (593)
T ss_pred ceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhc
Confidence 458999999999999988875553 356799999999998 999999999999999999999999999984
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
- -.....+..++|||.|+|||++++..|+.++|-|++|+.++||....-++
T Consensus 401 ~------l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspf 451 (593)
T KOG0695|consen 401 G------LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPF 451 (593)
T ss_pred C------CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCc
Confidence 2 12233456789999999999999999999999999998877765554444
No 408
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.89 E-value=4.3e-24 Score=230.19 Aligned_cols=168 Identities=22% Similarity=0.321 Sum_probs=139.5
Q ss_pred hCCCCCceeecccCceeEEeccccCcH------------------------HHHHHHHHHHHccC---Cccccceeeecc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTGSW------------------------KSFIAECETLRNVR---HRNLVKLITSCS 712 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~------------------------~~~~~E~~~l~~l~---Hpniv~l~~~~~ 712 (929)
..+|...+.+|+|+||.|+.|.++... -..-.|+++|+.++ |+||++++++|
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF- 638 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF- 638 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee-
Confidence 346888999999999999988876221 12336999999997 99999999999
Q ss_pred cCCCCCcceEEEEEEec-CCCCccccccc--------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEE
Q 002376 713 SLDSKNMEFLALVYEFL-SNGSLGDWIHG--------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKV 783 (929)
Q Consensus 713 ~~~~~~~~~~~lV~e~~-~~gsL~~~l~~--------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki 783 (929)
++.+++|++||-- ++-+|++++.. .+.+..||+.|+++||++ +|||||||-+||.+|.+|-+|+
T Consensus 639 ----Eddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~kl 711 (772)
T KOG1152|consen 639 ----EDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKL 711 (772)
T ss_pred ----ecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEE
Confidence 4455689999964 55689999863 234568999999999998 9999999999999999999999
Q ss_pred eccccccccccccCCCCCccccceeccccccccccccCCCCC-CCCCCCCCCcCCCCCcch
Q 002376 784 GDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERP-STAGDVPTSESFAGEFNI 843 (929)
Q Consensus 784 ~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~s~g~~~~~~~~ 843 (929)
.|||.|.... ......++||.+|.|||++.|.+| +..-|||++|+.+|.+..
T Consensus 712 idfgsaa~~k--------sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivy 764 (772)
T KOG1152|consen 712 IDFGSAAYTK--------SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVY 764 (772)
T ss_pred eeccchhhhc--------CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEe
Confidence 9999987652 123456899999999999999987 888999999998887543
No 409
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=1.1e-22 Score=239.65 Aligned_cols=264 Identities=25% Similarity=0.316 Sum_probs=120.7
Q ss_pred cccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEec
Q 002376 201 NLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRM 280 (929)
Q Consensus 201 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~L 280 (929)
+-..|+|+.|.|+ .+|..+. ++|+.|++++|+|+ .+|.. .++ |++|+|
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l----p~~------------------------Lk~LdL 249 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL----PPE------------------------LRTLEV 249 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC----CCC------------------------CcEEEe
Confidence 4567788888887 4566554 36777888887776 34431 234 444444
Q ss_pred cCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEe
Q 002376 281 THNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYL 360 (929)
Q Consensus 281 s~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L 360 (929)
++|+|+. +|.. .++|+.|++++|.+..++. ..++|+.|+|++|+++ .+|.. +++|+.|+|
T Consensus 250 s~N~Lts-LP~l---p~sL~~L~Ls~N~L~~Lp~-----------lp~~L~~L~Ls~N~Lt-~LP~~----p~~L~~LdL 309 (788)
T PRK15387 250 SGNQLTS-LPVL---PPGLLELSIFSNPLTHLPA-----------LPSGLCKLWIFGNQLT-SLPVL----PPGLQELSV 309 (788)
T ss_pred cCCccCc-ccCc---ccccceeeccCCchhhhhh-----------chhhcCEEECcCCccc-ccccc----ccccceeEC
Confidence 4444442 2321 1233333444443332211 0123444555555554 23321 124555555
Q ss_pred cCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccc
Q 002376 361 GGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGE 440 (929)
Q Consensus 361 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 440 (929)
++|+|++ +|... .+|+.|++++|+|++ +|.. ..+|++|+|++|+|++ +|.. ..+|+.|++++|+|++
T Consensus 310 S~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~- 376 (788)
T PRK15387 310 SDNQLAS-LPALP---SELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS- 376 (788)
T ss_pred CCCcccc-CCCCc---ccccccccccCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-
Confidence 5555543 22211 234445555555542 3321 1245555555555543 2221 1234445555555542
Q ss_pred cCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeeccccccccc
Q 002376 441 IPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGP 520 (929)
Q Consensus 441 ~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 520 (929)
+|.. ..+|+.|++++|+|++ +| .. .++|+.||+++|+|++ +|..+ .+|+.|++++|+|+ .
T Consensus 377 LP~l---~~~L~~LdLs~N~Lt~-LP--------~l---~s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~ 436 (788)
T PRK15387 377 LPAL---PSGLKELIVSGNRLTS-LP--------VL---PSELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-R 436 (788)
T ss_pred Cccc---ccccceEEecCCcccC-CC--------Cc---ccCCCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-c
Confidence 3322 1345555555555542 21 11 1244555555555542 33322 23444555555554 3
Q ss_pred CCccccCCCCCCEEECCCCcCCCcCCccc
Q 002376 521 IPNIVAELKGLEVLDLSSNKLSGSIPSDL 549 (929)
Q Consensus 521 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 549 (929)
+|..+..+++|+.|+|++|+|++.+|..+
T Consensus 437 LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 437 LPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred cChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 44445555555555555555555444433
No 410
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.88 E-value=4.3e-22 Score=236.41 Aligned_cols=356 Identities=19% Similarity=0.288 Sum_probs=190.3
Q ss_pred CChhhHHHHHHHHhhcCCCCCCCCCCC----CCCCCCCCCCcc----------------eeeCCCCCcEEEEEcCCCCCc
Q 002376 25 GINTDKEALMSFKSQISQESPSSPLSY----WNPSSSPCTWPG----------------VICNNFGNRVIGLNLSSFGLE 84 (929)
Q Consensus 25 ~~~~~~~aLl~~k~~~~~~~~~~~l~~----w~~~~~~c~w~g----------------v~c~~~~~~v~~l~l~~~~l~ 84 (929)
..++|.+.+++..+.+.. .+.+.+ |+.+.+.|.-.. |.|.. +.|+.+...+....
T Consensus 60 ~~~~~~~~~~~~~~~l~~---p~~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~--~~vt~l~~~g~~~~ 134 (754)
T PRK15370 60 ASPEEIKSKFECLRMLAF---PAYADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGG--KSVTYTRVTESEQA 134 (754)
T ss_pred CCHHHHHHHHHHHHHhcC---CchhhccccccCCCCcccccCCcchhhheeeecCCceEEecCC--Cccccccccccccc
Confidence 357899999999999854 345555 998889996554 55653 45666554442211
Q ss_pred cccCC--CC-------------------------------CCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCC
Q 002376 85 GTISP--HI-------------------------------GNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNL 131 (929)
Q Consensus 85 g~i~~--~l-------------------------------~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 131 (929)
..... +. +--.+.+.|+|++++++ .+|..+. ++|+.|+|++|+|
T Consensus 135 ~~~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~L 211 (754)
T PRK15370 135 SSASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT-TIPACIP--EQITTLILDNNEL 211 (754)
T ss_pred ccCCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCC
Confidence 11100 00 00123444555554444 3343332 2444555555554
Q ss_pred CCCcccccccccccceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeeccc
Q 002376 132 QGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINR 211 (929)
Q Consensus 132 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~ 211 (929)
+ .+|..+. ++|++|+|++|+|+ .+|.. +. .+| +.|+|++|+
T Consensus 212 t-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~-l~--~~L--------------------------------~~L~Ls~N~ 252 (754)
T PRK15370 212 K-SLPENLQ--GNIKTLYANSNQLT-SIPAT-LP--DTI--------------------------------QEMELSINR 252 (754)
T ss_pred C-cCChhhc--cCCCEEECCCCccc-cCChh-hh--ccc--------------------------------cEEECcCCc
Confidence 4 2333222 24455555555444 33332 11 234 444555554
Q ss_pred CCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccC
Q 002376 212 LAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPP 291 (929)
Q Consensus 212 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 291 (929)
+. .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|++++|++++ +|..+. ++|+.|++++|.++. +|.
T Consensus 253 L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~---~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-LP~ 321 (754)
T PRK15370 253 IT-ELPERLP--SALQSLDLFHNKIS-CLPENLP---EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-LPE 321 (754)
T ss_pred cC-cCChhHh--CCCCEEECcCCccC-ccccccC---CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-CCc
Confidence 44 2333332 24455555555554 3443332 244555555555543 233222 356666666666663 343
Q ss_pred CCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCC
Q 002376 292 GLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPA 371 (929)
Q Consensus 292 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~ 371 (929)
.+. ++|+.|++++|.+..++. .+ .++|+.|+|++|+|+ .+|..+. ..|+.|+|++|+|+. +|.
T Consensus 322 ~l~--~sL~~L~Ls~N~Lt~LP~--------~l--~~sL~~L~Ls~N~L~-~LP~~lp---~~L~~LdLs~N~Lt~-LP~ 384 (754)
T PRK15370 322 TLP--PGLKTLEAGENALTSLPA--------SL--PPELQVLDVSKNQIT-VLPETLP---PTITTLDVSRNALTN-LPE 384 (754)
T ss_pred ccc--ccceeccccCCccccCCh--------hh--cCcccEEECCCCCCC-cCChhhc---CCcCEEECCCCcCCC-CCH
Confidence 322 466666777776655432 11 257888888888887 5676543 368888888888874 454
Q ss_pred CCCCCCcccEEEeeCCCCCcccCccc----cCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCccccc-ccCcccc
Q 002376 372 SIGRLRSLTLLDLSYNSISGEIPIEI----GQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTG-EIPISFG 446 (929)
Q Consensus 372 ~~~~l~~L~~L~Ls~N~l~~~~p~~~----~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~ 446 (929)
.+. .+|+.|++++|+|+ .+|..+ +.++++..|++.+|.++. ..+.+|+.| ++.+.+.| .++...+
T Consensus 385 ~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~------~tl~~L~~L-l~s~~~~gp~i~~~~~ 454 (754)
T PRK15370 385 NLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE------RTIQNMQRL-MSSVGYQGPRVLFAMG 454 (754)
T ss_pred hHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH------HHHHHHHHh-hhcccccCCccccccc
Confidence 443 36888888888887 445443 445778889999998862 334455555 44455543 3344445
Q ss_pred cccccceecccCCcCCCCC
Q 002376 447 NFQSLLSIDLSNNRINGNI 465 (929)
Q Consensus 447 ~l~~L~~L~Ls~N~l~g~i 465 (929)
.+.+++....-.+.+++.+
T Consensus 455 ~~~~l~~~~~l~~a~~~Wl 473 (754)
T PRK15370 455 DFSIVRVTRPLHQAVQGWL 473 (754)
T ss_pred ccccccccchHHHHHhccC
Confidence 5555555444444444433
No 411
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.88 E-value=6.5e-23 Score=216.44 Aligned_cols=201 Identities=29% Similarity=0.317 Sum_probs=145.8
Q ss_pred HHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhh
Q 002376 686 WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHN 757 (929)
Q Consensus 686 ~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~ 757 (929)
.+.+.+|++.+++++|+|++++++++... ...++||||+++++|.+++.... ....++++|++|||+
T Consensus 31 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 105 (244)
T smart00220 31 RERILREISILKKLKHPNIVRLYDVFEDE-----DKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHS 105 (244)
T ss_pred HHHHHHHHHHHHhCCCCcHHHHHhheeeC-----CEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999998643 34899999999999999886433 235689999999999
Q ss_pred CCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCC
Q 002376 758 DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESF 837 (929)
Q Consensus 758 ~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~ 837 (929)
. +++|+||+|+||++++++.++++|||.+....... ......|+..|+|||...+..++.++|||++|++
T Consensus 106 ~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~ 175 (244)
T smart00220 106 N---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVI 175 (244)
T ss_pred c---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHH
Confidence 8 99999999999999999999999999998764321 1233468889999999988889999999999977
Q ss_pred CCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhH-HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 838 AGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHD-CLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
++++.....++....+ . ................... ...++.. ++.+|+..+|++||++.++++
T Consensus 176 l~~l~~~~~p~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 176 LYELLTGKPPFPGDDQ-L-----LELFKKIGKPKPPFPPPEWKISPEAKD-LIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHhCCCCCCCCCc-H-----HHHHHHHhccCCCCccccccCCHHHHH-HHHHHccCCchhccCHHHHhh
Confidence 6664433222211110 0 0111111111100000000 1122333 777999999999999999986
No 412
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.87 E-value=2.2e-23 Score=210.84 Aligned_cols=213 Identities=22% Similarity=0.300 Sum_probs=150.6
Q ss_pred cHHHHHHHHHHHHccCCccccceeeecccCCC-CCcceEEEEEEecCCCCcccccc------ccccccccHHHHHHHhhh
Q 002376 685 SWKSFIAECETLRNVRHRNLVKLITSCSSLDS-KNMEFLALVYEFLSNGSLGDWIH------GERKNELDITSALDYLHN 757 (929)
Q Consensus 685 ~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-~~~~~~~lV~e~~~~gsL~~~l~------~~~~~~~~ia~aL~yLH~ 757 (929)
..++..+|...+..+.|+||++++.++.-... .....+|+|||||. ++|...+. ..+.+..|++.|++|||+
T Consensus 58 ~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~-~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs 136 (369)
T KOG0665|consen 58 HAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMD-ANLCQVILMELDHETISYILYQMLCGIKHLHS 136 (369)
T ss_pred cchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhh-hHHHHHHHHhcchHHHHHHHHHHHHHHHHHHh
Confidence 34566789999999999999999999865332 12345799999994 68877765 123457899999999999
Q ss_pred CCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCC
Q 002376 758 DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESF 837 (929)
Q Consensus 758 ~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~ 837 (929)
. +|+||||||+||++..++.+||.|||+|+.-. .. ...+..+.|..|.|||++.+..+.+.+||||.||+
T Consensus 137 ~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~------~~-~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci 206 (369)
T KOG0665|consen 137 A---GIIHRDLKPSNIVVNSDCTLKILDFGLARTED------TD-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 206 (369)
T ss_pred c---ceeecccCcccceecchhheeeccchhhcccC------cc-cccCchhheeeccCchheeccCCcccchhhhhhhH
Confidence 8 99999999999999999999999999998431 11 23455678999999999999999999999999998
Q ss_pred CCCcchhHHhhhc---------------CCc-hhhhccChHHHHhhcccch--------------hhh--hhhHHHHHHH
Q 002376 838 AGEFNIVKWVESN---------------LPE-NVLQVLDPELRQLMTSNES--------------QTI--QLHDCLITII 885 (929)
Q Consensus 838 ~~~~~~~~~~~~~---------------~~~-~~~~~~~~~l~~~~~~~~~--------------~~~--~~~~~~~~~~ 885 (929)
..|+......+.. .|+ .+.+.+.+..+-.....+. ... +....-..+.
T Consensus 207 ~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~a 286 (369)
T KOG0665|consen 207 MGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLA 286 (369)
T ss_pred HHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHH
Confidence 8776544332211 011 1211111111111110000 000 0000113466
Q ss_pred HHHhccccCCCCCCCCCHHHHHH
Q 002376 886 GSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 886 ~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
++++.+++..||++|.+++++++
T Consensus 287 rdll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 287 RDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HHHHHHhhccChhhcccHHHHhc
Confidence 77899999999999999999875
No 413
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.87 E-value=1.1e-23 Score=202.40 Aligned_cols=170 Identities=23% Similarity=0.345 Sum_probs=137.5
Q ss_pred hhCCCCCceeecccCceeEEecccc-------------CcHHHHHHHHHHHHccC-CccccceeeecccCCCCCcceEEE
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERT-------------GSWKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~-------------~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
..++|+..+++|+|-|++||.|... ...+...+|+.+++.+. ||||++++++..++.++ ...+
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sk---tpaL 112 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESK---TPSL 112 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCcccc---Cchh
Confidence 3568888999999999999998743 23567899999999997 99999999999876553 3689
Q ss_pred EEEecCCCCcccccc-----ccccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC-CceEEeccccccccccccCC
Q 002376 725 VYEFLSNGSLGDWIH-----GERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE-MTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 725 V~e~~~~gsL~~~l~-----~~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~-~~~ki~DfGla~~~~~~~~~ 798 (929)
|+||+.+.+...... +.+....+++.||.|+|+. ||+|||+||.||+||.. -..++.|+|+|.+..++.
T Consensus 113 iFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~-- 187 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-- 187 (338)
T ss_pred HhhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcCCCc--
Confidence 999999887765543 3455678999999999998 99999999999999965 479999999999875331
Q ss_pred CCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCc
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEF 841 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~ 841 (929)
.....+.+..|--||.+..-+ |+.+-|+||+||.+.++
T Consensus 188 -----eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~m 226 (338)
T KOG0668|consen 188 -----EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 226 (338)
T ss_pred -----eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHH
Confidence 123346678889999987654 88999999999765443
No 414
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.86 E-value=3.2e-22 Score=197.29 Aligned_cols=229 Identities=20% Similarity=0.210 Sum_probs=158.4
Q ss_pred CCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcceEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
+.|.+.+.+|+|.||++..+++++ ..++|.+|...--.+ .|.||+.-+++-++ ..+++++
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFq----t~d~YvF 99 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQ----TSDAYVF 99 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhh----cCceEEE
Confidence 467788999999999999888763 357888888765555 58999998887654 4456889
Q ss_pred EEEecCCCCcccccccc-------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeee-c-CCCceEEeccccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGE-------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILL-D-EEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~-------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl-~-~~~~~ki~DfGla~~~~~~ 795 (929)
++||+|.|+|..-+... ++++.|++.|++|||+. .+||||||.+|||| + +..++|+||||..+....
T Consensus 100 ~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~- 175 (378)
T KOG1345|consen 100 VQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT- 175 (378)
T ss_pred eeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccCc-
Confidence 99999999999887632 34578999999999998 99999999999999 3 344899999999875421
Q ss_pred cCCCCCccccceeccccccccccccCCC-----CCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhccc
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGE-----RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
.-.....+..|-|||..... ...+..|||.||++.+.+.++..+|.. ..+.|+....+..-.
T Consensus 176 --------tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQk-----a~~~d~~Y~~~~~w~ 242 (378)
T KOG1345|consen 176 --------TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQK-----ASIMDKPYWEWEQWL 242 (378)
T ss_pred --------eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchh-----hhccCchHHHHHHHh
Confidence 11112345679999976432 257889999999888777666555542 223344333322111
Q ss_pred chhhhhhh----HHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 002376 871 ESQTIQLH----DCLITIIGSVGLSCTTESPGGRIGIREALRRLK 911 (929)
Q Consensus 871 ~~~~~~~~----~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 911 (929)
.......+ ..-.++++ +..+-+.++|++|-...++.++..
T Consensus 243 ~rk~~~~P~~F~~fs~~a~r-~Fkk~lt~~~~drcki~~~kk~rk 286 (378)
T KOG1345|consen 243 KRKNPALPKKFNPFSEKALR-LFKKSLTPRFKDRCKIWTAKKMRK 286 (378)
T ss_pred cccCccCchhhcccCHHHHH-HHHHhcCCcccccchhHHHHHHHH
Confidence 11111111 11233444 666889999999966666655543
No 415
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.85 E-value=3.6e-22 Score=209.92 Aligned_cols=183 Identities=24% Similarity=0.298 Sum_probs=138.7
Q ss_pred HHHhhCCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccC-CccccceeeecccCCCC
Q 002376 656 LRRATGNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVR-HRNLVKLITSCSSLDSK 717 (929)
Q Consensus 656 l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~ 717 (929)
+....+.|..+++||+|.|++||++.... ......+|++.|..+. +.||+++.+++ +
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~-----r 105 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCF-----R 105 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhh-----c
Confidence 33445678899999999999999987642 3456889999999995 99999999998 4
Q ss_pred CcceEEEEEEecCCCCccccccc-----cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC-CCceEEeccccccc
Q 002376 718 NMEFLALVYEFLSNGSLGDWIHG-----ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE-EMTAKVGDFGLARF 791 (929)
Q Consensus 718 ~~~~~~lV~e~~~~gsL~~~l~~-----~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~-~~~~ki~DfGla~~ 791 (929)
......+|+||++.-+..++... .+.+......||+|+|.. |||||||||+|+|.+. .+.-.|.|||+|..
T Consensus 106 nnd~v~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~ 182 (418)
T KOG1167|consen 106 NNDQVAIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQR 182 (418)
T ss_pred cCCeeEEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhHHH
Confidence 45568999999999888777653 345567889999999998 9999999999999975 45789999999983
Q ss_pred ccccc------C------C--------------------------CCCccccceeccccccccccccCCCC-CCCCCCCC
Q 002376 792 LLERV------D------N--------------------------QSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVP 832 (929)
Q Consensus 792 ~~~~~------~------~--------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~ 832 (929)
...+. . . ..........+||+||+|||++...+ .++++|||
T Consensus 183 ~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiw 262 (418)
T KOG1167|consen 183 YDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIW 262 (418)
T ss_pred HHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcccee
Confidence 21100 0 0 00000112346999999999987654 79999999
Q ss_pred CCcCCCCCcchhHH
Q 002376 833 TSESFAGEFNIVKW 846 (929)
Q Consensus 833 s~g~~~~~~~~~~~ 846 (929)
|.|++...+.....
T Consensus 263 s~GVI~Lslls~~~ 276 (418)
T KOG1167|consen 263 SAGVILLSLLSRRY 276 (418)
T ss_pred eccceeehhhcccc
Confidence 99988665443333
No 416
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.85 E-value=1.1e-21 Score=201.92 Aligned_cols=186 Identities=31% Similarity=0.470 Sum_probs=150.6
Q ss_pred ecccCceeEEeccccC-------------c----HHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEecCC
Q 002376 669 IGSGSFGSVLHNERTG-------------S----WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSN 731 (929)
Q Consensus 669 iG~G~~g~Vy~~~~~~-------------~----~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~~ 731 (929)
||+|++|.||++.... . .+.+.+|++.++.++|++++++++++... ...++||||+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDE-----NHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecC-----CeEEEEEecCCC
Confidence 6899999999987651 1 25789999999999999999999998543 458999999999
Q ss_pred CCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC-CCceEEeccccccccccccCCCCC
Q 002376 732 GSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE-EMTAKVGDFGLARFLLERVDNQSS 801 (929)
Q Consensus 732 gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~-~~~~ki~DfGla~~~~~~~~~~~~ 801 (929)
++|.+++... .....+++++++|||+. +++|+||+|.||+++. ++.++|+|||.+........
T Consensus 76 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---- 148 (215)
T cd00180 76 GSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS---- 148 (215)
T ss_pred CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc----
Confidence 9999998643 12356899999999998 9999999999999999 89999999999986532210
Q ss_pred ccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHH
Q 002376 802 ISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDC 880 (929)
Q Consensus 802 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 880 (929)
......+...|++||..... .++.+.|+|++|++++++ ..
T Consensus 149 --~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~ 189 (215)
T cd00180 149 --LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PE 189 (215)
T ss_pred --hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HH
Confidence 12234578899999999887 789999999999766553 01
Q ss_pred HHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 881 LITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 881 ~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
+.+ ++.+|++.+|++||+++++++.
T Consensus 190 ~~~----~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 190 LKD----LIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHH----HHHHHhhCCcccCcCHHHHhhC
Confidence 222 6669999999999999999864
No 417
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.83 E-value=1e-20 Score=224.78 Aligned_cols=118 Identities=25% Similarity=0.478 Sum_probs=56.0
Q ss_pred CCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEe
Q 002376 329 HLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGL 408 (929)
Q Consensus 329 ~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 408 (929)
+|++|+|++|+|+ .+|..+. .+|+.|++++|+++. +|..+. ++|+.|++++|.+++ +|..+. ++|+.|++
T Consensus 284 sL~~L~Ls~N~Lt-~LP~~lp---~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~L 353 (754)
T PRK15370 284 ELRYLSVYDNSIR-TLPAHLP---SGITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDV 353 (754)
T ss_pred CCcEEECCCCccc-cCcccch---hhHHHHHhcCCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEEC
Confidence 4555555555555 2443322 245555666665553 233221 355555555555553 343332 45555555
Q ss_pred cCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCC
Q 002376 409 AGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRIN 462 (929)
Q Consensus 409 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 462 (929)
++|+|+ .+|..+. ++|+.|+|++|+|+. +|..+. .+|+.|++++|+|+
T Consensus 354 s~N~L~-~LP~~lp--~~L~~LdLs~N~Lt~-LP~~l~--~sL~~LdLs~N~L~ 401 (754)
T PRK15370 354 SKNQIT-VLPETLP--PTITTLDVSRNALTN-LPENLP--AALQIMQASRNNLV 401 (754)
T ss_pred CCCCCC-cCChhhc--CCcCEEECCCCcCCC-CCHhHH--HHHHHHhhccCCcc
Confidence 555554 2333332 345555555555552 333322 23555555555554
No 418
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.83 E-value=4e-22 Score=246.07 Aligned_cols=196 Identities=16% Similarity=0.150 Sum_probs=125.3
Q ss_pred HccCC-ccccceeeecccCCCC--CcceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEE
Q 002376 697 RNVRH-RNLVKLITSCSSLDSK--NMEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVV 764 (929)
Q Consensus 697 ~~l~H-pniv~l~~~~~~~~~~--~~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~ii 764 (929)
+.++| +||++++++|...... ....++.++||+ +++|.++++... .++.||++||+|||++ +|+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---gIv 102 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQ---GIV 102 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 45567 6899999987433211 123467889988 569999996422 2367999999999998 999
Q ss_pred ecCCCCCCeeecC-------------------CCceEEeccccccccccccCC----------CCCccccceeccccccc
Q 002376 765 HSDLKPGNILLDE-------------------EMTAKVGDFGLARFLLERVDN----------QSSISSTHVFMGSIGYV 815 (929)
Q Consensus 765 HrDlk~~NILl~~-------------------~~~~ki~DfGla~~~~~~~~~----------~~~~~~~~~~~gt~~y~ 815 (929)
||||||+|||++. ++.+|++|||+++........ ..........+||+.||
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 9999999999954 445667777776542110000 00000112246899999
Q ss_pred cccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCch-hhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccC
Q 002376 816 PPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPEN-VLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTT 894 (929)
Q Consensus 816 aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~ 894 (929)
|||++.+..++.++||||+||++||+.... .+.. ....+........+. .......+... ++.+||+
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~-----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~~~L~ 250 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPV-----SSREEKSRTMSSLRHRVLPP------QILLNWPKEAS-FCLWLLH 250 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCC-----CchhhHHHHHHHHHHhhcCh------hhhhcCHHHHH-HHHHhCC
Confidence 999999999999999999999888864321 1211 001111000111100 00011222333 7779999
Q ss_pred CCCCCCCCHHHHHH
Q 002376 895 ESPGGRIGIREALR 908 (929)
Q Consensus 895 ~dP~~RPs~~ev~~ 908 (929)
++|.+||+|+|+++
T Consensus 251 ~~P~~Rps~~eil~ 264 (793)
T PLN00181 251 PEPSCRPSMSELLQ 264 (793)
T ss_pred CChhhCcChHHHhh
Confidence 99999999999975
No 419
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.83 E-value=6.1e-21 Score=208.77 Aligned_cols=158 Identities=20% Similarity=0.178 Sum_probs=119.7
Q ss_pred HHHhhCCCCCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHccCCccccceeeeccc
Q 002376 656 LRRATGNFSHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVRHRNLVKLITSCSS 713 (929)
Q Consensus 656 l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~ 713 (929)
.....++|...+.||+|+||+||+|.+.. ..+.|.+|++++++++|+|+++.+..+
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-- 90 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-- 90 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence 34456789999999999999999986531 023588999999999999998633222
Q ss_pred CCCCCcceEEEEEEecCCCCcccccc-ccccccccHHHHHHHhhhCCCCCEEecCC-CCCCeeecCCCceEEeccccccc
Q 002376 714 LDSKNMEFLALVYEFLSNGSLGDWIH-GERKNELDITSALDYLHNDCEVPVVHSDL-KPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 714 ~~~~~~~~~~lV~e~~~~gsL~~~l~-~~~~~~~~ia~aL~yLH~~~~~~iiHrDl-k~~NILl~~~~~~ki~DfGla~~ 791 (929)
+..|+||||+++++|..... ....+..++++||+|||+. +|+|||| ||+|||++.++.+||+|||+|+.
T Consensus 91 ------~~~~LVmE~~~G~~L~~~~~~~~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~ 161 (365)
T PRK09188 91 ------GKDGLVRGWTEGVPLHLARPHGDPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQLASV 161 (365)
T ss_pred ------CCcEEEEEccCCCCHHHhCccchHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECcccee
Confidence 12699999999999974321 1234567899999999998 9999999 99999999999999999999997
Q ss_pred cccccCCCC--CccccceeccccccccccccCCCC
Q 002376 792 LLERVDNQS--SISSTHVFMGSIGYVPPEYGLGER 824 (929)
Q Consensus 792 ~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~ 824 (929)
+........ .....+...|++.|+|||++.-+.
T Consensus 162 ~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~ 196 (365)
T PRK09188 162 FRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRE 196 (365)
T ss_pred cccCcchhhhhhhhhhhhhhccCccCCcccCChhh
Confidence 753321111 011124567899999999987554
No 420
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.82 E-value=5.6e-21 Score=203.04 Aligned_cols=113 Identities=28% Similarity=0.468 Sum_probs=93.6
Q ss_pred hCCCCCceeecccCceeEEeccccCc---------------HHHHHHHHHHHHccC-----Cc---cccceeeecccCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTGS---------------WKSFIAECETLRNVR-----HR---NLVKLITSCSSLDS 716 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~~---------------~~~~~~E~~~l~~l~-----Hp---niv~l~~~~~~~~~ 716 (929)
..+|...++||-|.|++||.+++.+. .+....||++|++++ |+ .||+++++|...+
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG- 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG- 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC-
Confidence 35888999999999999999988632 345668999999983 43 5999999998766
Q ss_pred CCcceEEEEEEecCCCCccccccc----------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeec
Q 002376 717 KNMEFLALVYEFLSNGSLGDWIHG----------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLD 776 (929)
Q Consensus 717 ~~~~~~~lV~e~~~~gsL~~~l~~----------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~ 776 (929)
.+..++|||+|+. |-+|..+|.. .+.++.||+.||.|||+.| +|||-||||+|||+.
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 4667899999999 6688888763 2345789999999999987 999999999999983
No 421
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.80 E-value=4.5e-21 Score=188.85 Aligned_cols=220 Identities=20% Similarity=0.258 Sum_probs=164.9
Q ss_pred ceeecccCceeEEeccccCc----------------HHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEec
Q 002376 666 ENLIGSGSFGSVLHNERTGS----------------WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFL 729 (929)
Q Consensus 666 ~~~iG~G~~g~Vy~~~~~~~----------------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~ 729 (929)
..+|.+...|+.|+|++++. .++|..|.-.++.+.||||.+++|.|.++ ....++..||
T Consensus 195 ~tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsp-----pnlv~isq~m 269 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSP-----PNLVIISQYM 269 (448)
T ss_pred hhhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCC-----CCceEeeeec
Confidence 34688888999999999842 35788899999999999999999999543 4589999999
Q ss_pred CCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEe--ccccccccccccC
Q 002376 730 SNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVG--DFGLARFLLERVD 797 (929)
Q Consensus 730 ~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~--DfGla~~~~~~~~ 797 (929)
+.|+|+..+++.. +++++||+|++|||+. ++-|..--+.+..|+||++.+++|+ |--++-.
T Consensus 270 p~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfq------ 342 (448)
T KOG0195|consen 270 PFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ------ 342 (448)
T ss_pred cchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeee------
Confidence 9999999998543 4578999999999997 4344445688999999999998875 2222111
Q ss_pred CCCCccccceeccccccccccccCCCCC---CCCCCCCCCcCCCCCcchhHHhhhcCCc-h-hhhccChHHHHhhcccch
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERP---STAGDVPTSESFAGEFNIVKWVESNLPE-N-VLQVLDPELRQLMTSNES 872 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~-~~~~~~~~l~~~~~~~~~ 872 (929)
.......+.||+||.++..+. -.++|+|||.+.++|+.+.+.++..++. + -.++.-..++-.++
T Consensus 343 -------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ip---- 411 (448)
T KOG0195|consen 343 -------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIP---- 411 (448)
T ss_pred -------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCC----
Confidence 112245789999999987763 4679999999999998888888877765 1 22222223332222
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQ 914 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~ 914 (929)
..+..-+.+++.-|++.||.+||.++.|+-.||++.
T Consensus 412 ------pgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 412 ------PGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ------CCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 223333344777999999999999999999999874
No 422
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.78 E-value=4.9e-20 Score=196.55 Aligned_cols=171 Identities=26% Similarity=0.319 Sum_probs=134.2
Q ss_pred hCCCCCceeecccCceeEEeccccCc---------------HHHHHHHHHHHHccC------CccccceeeecccCCCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTGS---------------WKSFIAECETLRNVR------HRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~~---------------~~~~~~E~~~l~~l~------Hpniv~l~~~~~~~~~~~ 718 (929)
..+|.+....|+|-|+.|.+|.+... .+.=.+|+++|.++. --++++++..|..
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h----- 505 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH----- 505 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh-----
Confidence 35788888899999999999987622 123347999999994 3378999888854
Q ss_pred cceEEEEEEecCCCCcccccccc-----------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC-ceEEecc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGE-----------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM-TAKVGDF 786 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~-----------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~-~~ki~Df 786 (929)
..++|||+|-.. -+|.+++++. +.++.|+.-||..|... +|+|.||||.|||+.+.- ..|||||
T Consensus 506 knHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCDf 581 (752)
T KOG0670|consen 506 KNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCDF 581 (752)
T ss_pred cceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeeccC
Confidence 345999999874 5888887632 34467889999999987 999999999999998765 6899999
Q ss_pred ccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHh
Q 002376 787 GLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWV 847 (929)
Q Consensus 787 Gla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~ 847 (929)
|.|....+. ..+.+.-+..|.|||++.|.+|+...|+||.||.+||+.++...
T Consensus 582 GSA~~~~en--------eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIl 634 (752)
T KOG0670|consen 582 GSASFASEN--------EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKIL 634 (752)
T ss_pred ccccccccc--------cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeecccee
Confidence 998765321 11122346679999999999999999999999999998665543
No 423
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.78 E-value=1.2e-19 Score=189.27 Aligned_cols=168 Identities=32% Similarity=0.455 Sum_probs=137.2
Q ss_pred CCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEE
Q 002376 663 FSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV 725 (929)
|+..+.||+|++|.||++.... ..+.+.+|++.+++++|+|++++++++... ...++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-----~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDP-----EPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecC-----CceEEE
Confidence 4567899999999999987642 356788999999999999999999998543 347999
Q ss_pred EEecCCCCcccccccccc---------ccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccccc
Q 002376 726 YEFLSNGSLGDWIHGERK---------NELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~~~~---------~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 796 (929)
+||+++++|.+++...+. ...+++.++.|||+. +++|+|++|+||+++.++.++|+|||.+.......
T Consensus 76 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~ 152 (225)
T smart00221 76 MEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL 152 (225)
T ss_pred EeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc
Confidence 999999999999875432 256789999999998 99999999999999999999999999998764321
Q ss_pred CCCCCccccceecccccccccccc-CCCCCCCCCCCCCCcCCCCCcch
Q 002376 797 DNQSSISSTHVFMGSIGYVPPEYG-LGERPSTAGDVPTSESFAGEFNI 843 (929)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DV~s~g~~~~~~~~ 843 (929)
........++..|++||.. ....++.++|||++|++++++..
T Consensus 153 -----~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~ 195 (225)
T smart00221 153 -----AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLW 195 (225)
T ss_pred -----cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHH
Confidence 0012335678899999998 66678889999999976666443
No 424
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.76 E-value=4.2e-20 Score=204.22 Aligned_cols=160 Identities=24% Similarity=0.352 Sum_probs=72.0
Q ss_pred CCCCEEEecCCcCCCC----CcccccCCCCCceecccCcccccc----cCcccccccccceecccCCcCCCCCCCCcccC
Q 002376 401 QGLQVLGLAGNEIPGG----IPNSLANLKKLNQIDLSGNELTGE----IPISFGNFQSLLSIDLSNNRINGNIPKGILRP 472 (929)
Q Consensus 401 ~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~ 472 (929)
++|+.|++++|.+++. ++..+..+++|++|++++|.+++. ++..+..+++|+.|++++|.+++.- ...
T Consensus 137 ~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~----~~~ 212 (319)
T cd00116 137 PALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEG----ASA 212 (319)
T ss_pred CCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHH----HHH
Confidence 4455555555554421 222344444555555555555421 1222333345555555555554211 011
Q ss_pred CchhhhcccCccEEEecCCCCCCCCCcchhc-----CcCcceeeccccccc----ccCCccccCCCCCCEEECCCCcCCC
Q 002376 473 LPEEISRLENVVTIDLSDNSLSGNLPNSLKN-----CKSLEELLMAYNQFS----GPIPNIVAELKGLEVLDLSSNKLSG 543 (929)
Q Consensus 473 ~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~ 543 (929)
++..+..+++|++||+++|.+++.....+.. .+.|+.|++++|.++ ..+...+..+++|+++|+++|.++.
T Consensus 213 l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~ 292 (319)
T cd00116 213 LAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGE 292 (319)
T ss_pred HHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcH
Confidence 1223334455555555555555322222211 245566666666554 1223334444566666666666653
Q ss_pred c----CCcccccC-CCCCeEeCCCCc
Q 002376 544 S----IPSDLQNL-QALRSLNLTFNN 564 (929)
Q Consensus 544 ~----~p~~~~~l-~~L~~L~Ls~N~ 564 (929)
. ....+... +.|+++++.+|.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 293 EGAQLLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred HHHHHHHHHHhhcCCchhhcccCCCC
Confidence 3 22222223 455555555554
No 425
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.75 E-value=2.2e-19 Score=180.00 Aligned_cols=161 Identities=18% Similarity=0.106 Sum_probs=108.0
Q ss_pred CCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCCc
Q 002376 732 GSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSI 802 (929)
Q Consensus 732 gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~ 802 (929)
|+|.++++.. ..++.||+.||+|||+. + ||+||++++++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~------- 62 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPE------- 62 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccc-------
Confidence 5667766532 23467999999999997 4 999999999999999 9999865321
Q ss_pred cccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHHHH
Q 002376 803 SSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLI 882 (929)
Q Consensus 803 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 882 (929)
...||+.|||||++.+..++.++||||+|+++|++..+..++..... ....+..............+ .......
T Consensus 63 ----~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 136 (176)
T smart00750 63 ----QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERE-LSAILEILLNGMPADDPRDR-SNLESVS 136 (176)
T ss_pred ----cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccch-hcHHHHHHHHHhccCCcccc-ccHHHHH
Confidence 12589999999999999999999999999888887655544322111 11111111111111100000 0111122
Q ss_pred H--HHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 883 T--IIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 883 ~--~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
. -+++++.+||+.+|++||++.|+++.+..+...
T Consensus 137 ~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 137 AARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred hhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 2 234488899999999999999999988776544
No 426
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=1.6e-19 Score=199.55 Aligned_cols=209 Identities=23% Similarity=0.304 Sum_probs=121.6
Q ss_pred CCCCCCCEEEccCCccccccCchhhhccc--cccEEEecCCcccc----ccCCCCCCC-CcccEEEeeCCCCCcc----c
Q 002376 325 TNSTHLNYLALDGNQFEGKIPESIGNFSN--ELSKLYLGGNHIYG----KIPASIGRL-RSLTLLDLSYNSISGE----I 393 (929)
Q Consensus 325 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~--~L~~L~Ls~N~l~~----~~p~~~~~l-~~L~~L~Ls~N~l~~~----~ 393 (929)
..+++|+.|++++|.+.+..+..+..+.. +|++|++++|++.+ .+...+..+ ++|+.|+|++|.+++. +
T Consensus 78 ~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~ 157 (319)
T cd00116 78 TKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEAL 157 (319)
T ss_pred HhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHH
Confidence 34455555555555555444444443331 26666666665552 222333444 6667777777766632 2
Q ss_pred CccccCCCCCCEEEecCCcCCCC----CcccccCCCCCceecccCcccccc----cCcccccccccceecccCCcCCCCC
Q 002376 394 PIEIGQLQGLQVLGLAGNEIPGG----IPNSLANLKKLNQIDLSGNELTGE----IPISFGNFQSLLSIDLSNNRINGNI 465 (929)
Q Consensus 394 p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~i 465 (929)
+..+..+++|++|++++|.+++. ++..+..+++|++|+|++|.+++. ++..+..+++|++|++++|.+++..
T Consensus 158 ~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~ 237 (319)
T cd00116 158 AKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAG 237 (319)
T ss_pred HHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHH
Confidence 33455556677777777776632 233344556777777777776533 2334556677777777777776421
Q ss_pred CCCcccCCchhhh-----cccCccEEEecCCCCCC----CCCcchhcCcCcceeeccccccccc----CCccccCC-CCC
Q 002376 466 PKGILRPLPEEIS-----RLENVVTIDLSDNSLSG----NLPNSLKNCKSLEELLMAYNQFSGP----IPNIVAEL-KGL 531 (929)
Q Consensus 466 ~~~~~~~~p~~~~-----~l~~L~~LdLs~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l-~~L 531 (929)
...+. ..+.|+.|++++|.++. .+...+..+++|+++++++|.++.. ....+... +.|
T Consensus 238 --------~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~ 309 (319)
T cd00116 238 --------AAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNEL 309 (319)
T ss_pred --------HHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCch
Confidence 11111 13577888888887762 2334555667888888888888744 34444445 678
Q ss_pred CEEECCCCcC
Q 002376 532 EVLDLSSNKL 541 (929)
Q Consensus 532 ~~L~Ls~N~l 541 (929)
+.||+.+|.+
T Consensus 310 ~~~~~~~~~~ 319 (319)
T cd00116 310 ESLWVKDDSF 319 (319)
T ss_pred hhcccCCCCC
Confidence 8888888754
No 427
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.73 E-value=1.3e-19 Score=167.05 Aligned_cols=178 Identities=32% Similarity=0.540 Sum_probs=120.8
Q ss_pred CCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCccccccccccee
Q 002376 375 RLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSI 454 (929)
Q Consensus 375 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 454 (929)
++++.+.|.||+|+++ .+|..+..+.+|++|++++|+|. .+|..+..+++|+.|+++-|++. ..|..|+.++.|++|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 4556666777777776 55666777777777777777776 56677777777777777777776 677788888888888
Q ss_pred cccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEE
Q 002376 455 DLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVL 534 (929)
Q Consensus 455 ~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 534 (929)
||.+|+++.. .+|..|..+..|+.|+|+.|.+. .+|..++.+++|+.|
T Consensus 108 dltynnl~e~-------------------------------~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil 155 (264)
T KOG0617|consen 108 DLTYNNLNEN-------------------------------SLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQIL 155 (264)
T ss_pred hccccccccc-------------------------------cCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEE
Confidence 8887776521 34555556666666666666666 556666777777777
Q ss_pred ECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCCCCCCC---CCCCcccccCCCC
Q 002376 535 DLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIF---RNMSNVHLKGNPK 588 (929)
Q Consensus 535 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~---~~l~~l~l~~N~~ 588 (929)
.+..|.+- ..|..++.+++|+.|.+.+|+++-.+|+.+.+ .+-+......|||
T Consensus 156 ~lrdndll-~lpkeig~lt~lrelhiqgnrl~vlppel~~l~l~~~k~v~r~E~NPw 211 (264)
T KOG0617|consen 156 SLRDNDLL-SLPKEIGDLTRLRELHIQGNRLTVLPPELANLDLVGNKQVMRMEENPW 211 (264)
T ss_pred eeccCchh-hCcHHHHHHHHHHHHhcccceeeecChhhhhhhhhhhHHHHhhhhCCC
Confidence 77777665 46777777777777777777777666654432 2224456677776
No 428
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.72 E-value=1.8e-19 Score=166.10 Aligned_cols=165 Identities=32% Similarity=0.496 Sum_probs=84.9
Q ss_pred CCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhccCCCC
Q 002376 91 IGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSL 170 (929)
Q Consensus 91 l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L 170 (929)
+.++++.+.|-||+|+++ .+|+.+..|.+|+.|++++|+|. ..|.+++.+++|+.|+++-|++. .+|.+ |+.++.|
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprg-fgs~p~l 104 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRG-FGSFPAL 104 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccc-cCCCchh
Confidence 344555555566666655 55555555555555555555555 45555555555555555555554 33333 5555555
Q ss_pred cEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCC
Q 002376 171 QVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPN 250 (929)
Q Consensus 171 ~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~ 250 (929)
++|||.+|++.. ...|+.|+.|+.|+-|+|++|.+. .+|.++.. +.+
T Consensus 105 evldltynnl~e-------------------------------~~lpgnff~m~tlralyl~dndfe-~lp~dvg~-lt~ 151 (264)
T KOG0617|consen 105 EVLDLTYNNLNE-------------------------------NSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGK-LTN 151 (264)
T ss_pred hhhhcccccccc-------------------------------ccCCcchhHHHHHHHHHhcCCCcc-cCChhhhh-hcc
Confidence 555555444422 234555555555555555555554 34444433 344
Q ss_pred cceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCC
Q 002376 251 LLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLG 294 (929)
Q Consensus 251 L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 294 (929)
|+.|.+..|.+- .+|..++.++.|+.|.+.+|+++ .+|+.++
T Consensus 152 lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~-vlppel~ 193 (264)
T KOG0617|consen 152 LQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELA 193 (264)
T ss_pred eeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee-ecChhhh
Confidence 444444333332 34555555566666666666665 3443333
No 429
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.71 E-value=4.2e-18 Score=199.00 Aligned_cols=232 Identities=20% Similarity=0.197 Sum_probs=155.3
Q ss_pred CceeecccCceeEEeccccCc-----HH-----------------HHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 665 HENLIGSGSFGSVLHNERTGS-----WK-----------------SFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 665 ~~~~iG~G~~g~Vy~~~~~~~-----~~-----------------~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
..+++|.|++|.|+....... .+ .+..|..+-..++|||++..+..+.+... .
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~-----~ 396 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDG-----I 396 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhccc-----c
Confidence 457899999996654332211 11 13345555666899999988887765432 3
Q ss_pred EEEEEecCCCCcccccccc-c-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGE-R-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~-~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
+-+||||++ +|+..+... + ....|+..|++|+|+. +|.|||+|++|++++.+|.+||+|||.+....-
T Consensus 397 ~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~ 472 (601)
T KOG0590|consen 397 LQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRY 472 (601)
T ss_pred hhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeecc
Confidence 344999999 999888653 1 2357899999999998 999999999999999999999999999876532
Q ss_pred ccCCCCCccccceeccccccccccccCCCCC-CCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERP-STAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
... ........++|+..|+|||++.+..| ....||||.|++...|.+...+|......-.+..+........ ....
T Consensus 473 ~~e--~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~-~~~~ 549 (601)
T KOG0590|consen 473 PWE--KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRN-IFEG 549 (601)
T ss_pred Ccc--hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccc-cccC
Confidence 211 11233456789999999999999888 4668999999887776666555543322100000000000000 0111
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.......++.-.+.++.+++++||.+|.||++|++
T Consensus 550 ~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 550 PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred hHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 11122334444455777999999999999999985
No 430
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.71 E-value=7.5e-18 Score=171.23 Aligned_cols=157 Identities=13% Similarity=0.124 Sum_probs=119.8
Q ss_pred hCCCCCceeecccCceeEEeccccC--------------cHH---------HHHHHHHHHHccCCccccceeeecccCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG--------------SWK---------SFIAECETLRNVRHRNLVKLITSCSSLDS 716 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~--------------~~~---------~~~~E~~~l~~l~Hpniv~l~~~~~~~~~ 716 (929)
.++|+..+++|+|+||.||...... ..+ .|.+|++.+.+++||+|..+..++...+.
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~ 109 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAER 109 (232)
T ss_pred hCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccc
Confidence 5789999999999999999865421 111 26799999999999999999888654321
Q ss_pred C---CcceEEEEEEecCCCCccccccccccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 717 K---NMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 717 ~---~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
. .....++||||++|.+|.++.........+++.+++.+|+. +++|||+||+||++++++ ++++|||..+...
T Consensus 110 ~~~~~~~~~~lvmEyi~G~tL~~~~~~~~~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~ 185 (232)
T PRK10359 110 KTLRYAHTYIMLIEYIEGVELNDMPEISEDVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTA 185 (232)
T ss_pred ccccccCCeEEEEEEECCccHHHhhhccHHHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-EEEEECCCccccc
Confidence 1 12347999999999999887543333456899999999998 999999999999999998 9999999887542
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCC
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFA 838 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~ 838 (929)
+. ... ..+.....|..++|+|++|++.
T Consensus 186 e~-----~a~-------------d~~vler~y~~~~di~~lg~~~ 212 (232)
T PRK10359 186 QR-----KAK-------------DRIDLERHYGIKNEIKDLGYYL 212 (232)
T ss_pred ch-----hhH-------------HHHHHHhHhcccccccceeEee
Confidence 11 000 1144455677899999999754
No 431
>PLN03150 hypothetical protein; Provisional
Probab=99.68 E-value=1.1e-16 Score=190.01 Aligned_cols=151 Identities=34% Similarity=0.606 Sum_probs=126.4
Q ss_pred CcCChhhHHHHHHHHhhcCCCCCCCCCCCCCCCCCCC-----CCcceeeCC--CC--CcEEEEEcCCCCCccccCCCCCC
Q 002376 23 SVGINTDKEALMSFKSQISQESPSSPLSYWNPSSSPC-----TWPGVICNN--FG--NRVIGLNLSSFGLEGTISPHIGN 93 (929)
Q Consensus 23 ~~~~~~~~~aLl~~k~~~~~~~~~~~l~~w~~~~~~c-----~w~gv~c~~--~~--~~v~~l~l~~~~l~g~i~~~l~~ 93 (929)
..+.++|.+||++||+++.. +.. .+|+. ++| .|.||.|+. .. .+|+.|+|+++++.|.+|+.++.
T Consensus 367 ~~t~~~~~~aL~~~k~~~~~--~~~--~~W~g--~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~ 440 (623)
T PLN03150 367 SKTLLEEVSALQTLKSSLGL--PLR--FGWNG--DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISK 440 (623)
T ss_pred cccCchHHHHHHHHHHhcCC--ccc--CCCCC--CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhC
Confidence 34567899999999999853 222 48973 344 799999953 22 25899999999999999999999
Q ss_pred CCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhcc-CCCCcE
Q 002376 94 LSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRN-LRSLQV 172 (929)
Q Consensus 94 L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~-l~~L~~ 172 (929)
|++|+.|+|++|++.|.+|..++.+++|+.|||++|+++|.+|..++++++|++|+|++|+++|.+|.. ++. +.++..
T Consensus 441 L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~-l~~~~~~~~~ 519 (623)
T PLN03150 441 LRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAA-LGGRLLHRAS 519 (623)
T ss_pred CCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChH-HhhccccCce
Confidence 999999999999999999999999999999999999999999999999999999999999999988877 554 356677
Q ss_pred EEcccccc
Q 002376 173 LNFGKNLL 180 (929)
Q Consensus 173 L~Ls~N~l 180 (929)
+++++|..
T Consensus 520 l~~~~N~~ 527 (623)
T PLN03150 520 FNFTDNAG 527 (623)
T ss_pred EEecCCcc
Confidence 77777754
No 432
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.67 E-value=1.8e-16 Score=174.57 Aligned_cols=241 Identities=18% Similarity=0.252 Sum_probs=160.3
Q ss_pred CCCCceeecccCceeEEeccccCc-----------------HHHHHHHHHHHHccCC----ccccceeeecccCCCCCcc
Q 002376 662 NFSHENLIGSGSFGSVLHNERTGS-----------------WKSFIAECETLRNVRH----RNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~~-----------------~~~~~~E~~~l~~l~H----pniv~l~~~~~~~~~~~~~ 720 (929)
+|...+.||+|+||.||++..... ...+..|+.++..+.. +++.++++... ....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCCc
Confidence 799999999999999999875421 1157789999999873 57777777763 1234
Q ss_pred eEEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC-----CceEEec
Q 002376 721 FLALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE-----MTAKVGD 785 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~-----~~~ki~D 785 (929)
+.|+||+.+ |.+|.++.+... .++.|+..||+++|+. +++||||||.|+++... ..+.+.|
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEe
Confidence 579999988 779988764221 2367899999999998 99999999999999754 4689999
Q ss_pred cccccccc--cccCC--CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhcc--
Q 002376 786 FGLARFLL--ERVDN--QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVL-- 859 (929)
Q Consensus 786 fGla~~~~--~~~~~--~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~-- 859 (929)
||+|+... ..... .........+.||..|+++..-.+...+.+.|+||+. ..+.++..+.+|....+..
T Consensus 171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~-----Y~l~el~~g~LPW~~~~~~~~ 245 (322)
T KOG1164|consen 171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLF-----YMLLELLKGSLPWEALEMTDL 245 (322)
T ss_pred cCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHH-----HHHHHHhcCCCCCccccccch
Confidence 99998332 11111 1111112346799999999999999999999999966 3344555454554111111
Q ss_pred ChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 860 DPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 860 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
...+........... ...+.+....++...+-..+..++|....+...+++.....
T Consensus 246 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 246 KSKFEKDPRKLLTDR--FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred HHHHHHHhhhhcccc--ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 111111100000000 00111112222445666689999999999999988876654
No 433
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.65 E-value=1.6e-16 Score=157.73 Aligned_cols=117 Identities=23% Similarity=0.208 Sum_probs=95.1
Q ss_pred CCceeecccCceeEEeccccCc------------------HHHHHHHHHHHHccC-CccccceeeecccCCCCCcceEEE
Q 002376 664 SHENLIGSGSFGSVLHNERTGS------------------WKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 664 ~~~~~iG~G~~g~Vy~~~~~~~------------------~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
.....|++|+||+||.+...+. ...|.+|+++|++++ |+++.+++++. . .++
T Consensus 5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~-----~----~~l 75 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD-----G----RHL 75 (218)
T ss_pred ccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc-----C----EEE
Confidence 3457899999999997655411 125789999999995 58899998863 1 599
Q ss_pred EEEecCCCCccccccc-cccccccHHHHHHHhhhCCCCCEEecCC-CCCCeeecCCCceEEecccccccc
Q 002376 725 VYEFLSNGSLGDWIHG-ERKNELDITSALDYLHNDCEVPVVHSDL-KPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~-~~~~~~~ia~aL~yLH~~~~~~iiHrDl-k~~NILl~~~~~~ki~DfGla~~~ 792 (929)
||||++|.+|.+.+.. ......+++.+++|+|+. +|+|||| ||+|||++.++.++|+|||+|...
T Consensus 76 vmeyI~G~~L~~~~~~~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~ 142 (218)
T PRK12274 76 DRSYLAGAAMYQRPPRGDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRG 142 (218)
T ss_pred EEeeecCccHHhhhhhhhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceec
Confidence 9999999999766532 223467889999999998 9999999 799999999999999999999854
No 434
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.65 E-value=3.6e-17 Score=169.83 Aligned_cols=198 Identities=22% Similarity=0.165 Sum_probs=125.8
Q ss_pred CCccccceeeecccCCC----------------------CCcceEEEEEEecCCCCcccccccc-------ccccccHHH
Q 002376 700 RHRNLVKLITSCSSLDS----------------------KNMEFLALVYEFLSNGSLGDWIHGE-------RKNELDITS 750 (929)
Q Consensus 700 ~Hpniv~l~~~~~~~~~----------------------~~~~~~~lV~e~~~~gsL~~~l~~~-------~~~~~~ia~ 750 (929)
+|||||++.++|.+.-. ......|+||.-.+ -+|.+++..+ +.+..|+.+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~~s~r~~~~~laQlLE 352 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRHRSYRTGRVILAQLLE 352 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCCCchHHHHHHHHHHHH
Confidence 69999999998876421 11234788888775 4788877532 233678999
Q ss_pred HHHHhhhCCCCCEEecCCCCCCeee--cCCC--ceEEeccccccccccccCCCCCccccceeccccccccccccCCCC--
Q 002376 751 ALDYLHNDCEVPVVHSDLKPGNILL--DEEM--TAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER-- 824 (929)
Q Consensus 751 aL~yLH~~~~~~iiHrDlk~~NILl--~~~~--~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-- 824 (929)
|+.|||.+ +|.|||+|+.|||+ |+|+ ...|+|||++-.-....-.-...+..-..-|...-||||+....+
T Consensus 353 av~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp 429 (598)
T KOG4158|consen 353 AVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGP 429 (598)
T ss_pred HHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCC
Confidence 99999998 99999999999999 4555 578999998753211000001111111224677899999876432
Q ss_pred ----CCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCC
Q 002376 825 ----PSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGR 900 (929)
Q Consensus 825 ----~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~R 900 (929)
-..|+|.|+.|.++||+....-++..-. ....+.+-.+ +.+-+..++....++++++...+++||++|
T Consensus 430 ~avvny~kAD~WA~GalaYEIfg~~NPFY~rG---em~L~~r~Yq-----e~qLPalp~~vpp~~rqlV~~lL~r~pskR 501 (598)
T KOG4158|consen 430 NAVVNYEKADTWAAGALAYEIFGRSNPFYKRG---EMLLDTRTYQ-----ESQLPALPSRVPPVARQLVFDLLKRDPSKR 501 (598)
T ss_pred ceeeccchhhhhhhhhhHHHHhccCCcccccc---hheechhhhh-----hhhCCCCcccCChHHHHHHHHHhcCCcccc
Confidence 3578999999998888533222222111 1112222111 122223344455667778889999999999
Q ss_pred CCHHHHHHH
Q 002376 901 IGIREALRR 909 (929)
Q Consensus 901 Ps~~ev~~~ 909 (929)
|+..-+...
T Consensus 502 vsp~iAANv 510 (598)
T KOG4158|consen 502 VSPNIAANV 510 (598)
T ss_pred CCccHHHhH
Confidence 986654443
No 435
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.63 E-value=3e-16 Score=173.66 Aligned_cols=234 Identities=26% Similarity=0.346 Sum_probs=159.3
Q ss_pred CCCceeecccCceeEEecccc--------------C--cHHHHHHHHHHHHccCCc-cccceeeecccCCCCCcceEEEE
Q 002376 663 FSHENLIGSGSFGSVLHNERT--------------G--SWKSFIAECETLRNVRHR-NLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~--------------~--~~~~~~~E~~~l~~l~Hp-niv~l~~~~~~~~~~~~~~~~lV 725 (929)
|...+.||.|+||.||++... . ..+.|.+|+.+++.+.|+ +++++.+++.... ..+++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~ 76 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEG-----SLYLV 76 (384)
T ss_pred ceeEEeecCCCCeEEEEEEeccEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCC-----EEEEE
Confidence 566788999999999998765 1 256789999999999988 7999999984322 27999
Q ss_pred EEecCCCCccccccccc-----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC-ceEEeccccccccc
Q 002376 726 YEFLSNGSLGDWIHGER-----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM-TAKVGDFGLARFLL 793 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~~~-----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~-~~ki~DfGla~~~~ 793 (929)
+||+.++++.+++.... .+..+++.+++|+|+. +++|||+||+||+++..+ .+|++|||.++...
T Consensus 77 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~ 153 (384)
T COG0515 77 MEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLP 153 (384)
T ss_pred EecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecC
Confidence 99999999997765432 2256889999999998 899999999999999988 79999999998553
Q ss_pred cccCCCCCccccceeccccccccccccCC---CCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhc--cChHHHHhhc
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLG---ERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQV--LDPELRQLMT 868 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~ 868 (929)
................||..|+|||.+.+ ..++...|+|++|+..++ ...+..|...... ..........
T Consensus 154 ~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~-----~~~~~~p~~~~~~~~~~~~~~~~~~ 228 (384)
T COG0515 154 DPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYE-----LLTGLPPFEGEKNSSATSQTLKIIL 228 (384)
T ss_pred CCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHH-----HHhCCCCCCCCCccccHHHHHHHHH
Confidence 32111100012345689999999999988 578999999999854444 2333322110000 0011111111
Q ss_pred ccchh--hhhhhHH----HHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 869 SNESQ--TIQLHDC----LITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 869 ~~~~~--~~~~~~~----~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
..... ....... ....+.++..+|+..+|..|.++.+....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 229 ELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred hcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 11100 0000000 01233347779999999999998887664
No 436
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.63 E-value=1.1e-16 Score=178.18 Aligned_cols=204 Identities=24% Similarity=0.303 Sum_probs=142.5
Q ss_pred HHccCCccccceeeecccCCCCCcceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCE-Ee
Q 002376 696 LRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPV-VH 765 (929)
Q Consensus 696 l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~i-iH 765 (929)
|+.+.|.|+.+++|.+... ...+.|.+||+.|+|.|.+.... ....+|+.||+|+|+- +| .|
T Consensus 1 l~~l~h~n~~~f~g~~~~~-----~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~h 72 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-----PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS---PIGYH 72 (484)
T ss_pred CcccchhhhhhheeeEecC-----CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC---cceee
Confidence 4578999999999999765 34899999999999999987422 1256899999999986 44 99
Q ss_pred cCCCCCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCC-------CCCCCCCCCCcCCC
Q 002376 766 SDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER-------PSTAGDVPTSESFA 838 (929)
Q Consensus 766 rDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DV~s~g~~~ 838 (929)
+.++++|.++|..+.+|++|||+......... ........-..-|.|||.+++.. .+.++||||+|+++
T Consensus 73 g~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~----~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~ 148 (484)
T KOG1023|consen 73 GALKSSNCLVDSRWVLKLTDFGLNSLLEETAE----PEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIM 148 (484)
T ss_pred eeeccccceeeeeEEEEechhhhccccccccc----ccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHH
Confidence 99999999999999999999999887642100 01111122355699999988742 47789999999988
Q ss_pred CCcchhHHhhhcCCc--hhhhccChHHHHhhcccchhhhhhh---HHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 839 GEFNIVKWVESNLPE--NVLQVLDPELRQLMTSNESQTIQLH---DCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 839 ~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
+|+....-++..... ...+++.. +.. ......++... +....++. ++.+||..+|++||+++.|-..++.+
T Consensus 149 ~ei~~r~~~~~~~~~~~~~~eii~~-~~~--~~~~~~rP~i~~~~e~~~~l~~-l~~~cw~e~P~~rPs~~~i~~~~~~~ 224 (484)
T KOG1023|consen 149 YEILFRSGPFDLRNLVEDPDEIILR-VKK--GGSNPFRPSIELLNELPPELLL-LVARCWEEIPEKRPSIEQIRSKLLTI 224 (484)
T ss_pred HHHHhccCccccccccCChHHHHHH-HHh--cCCCCcCcchhhhhhcchHHHH-HHHHhcccChhhCccHHHHHhhhhhh
Confidence 887666655544332 11222222 111 01111122111 12223455 78899999999999999998888776
Q ss_pred HH
Q 002376 914 QE 915 (929)
Q Consensus 914 ~~ 915 (929)
..
T Consensus 225 ~~ 226 (484)
T KOG1023|consen 225 NK 226 (484)
T ss_pred cc
Confidence 54
No 437
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.61 E-value=4.5e-16 Score=183.19 Aligned_cols=132 Identities=20% Similarity=0.293 Sum_probs=107.3
Q ss_pred ChHHHHHhhCCCCCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHccCCccccceee
Q 002376 652 SYDELRRATGNFSHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVRHRNLVKLIT 709 (929)
Q Consensus 652 ~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~Hpniv~l~~ 709 (929)
++.........|...+.||+|+||.||+|.+.+ ..+++.+|++++++++|++++....
T Consensus 324 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~ 403 (535)
T PRK09605 324 TWIKEEEVKRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVI 403 (535)
T ss_pred eeccccccccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEE
Confidence 333334445556778999999999999965431 0235788999999999999988777
Q ss_pred ecccCCCCCcceEEEEEEecCCCCccccccccccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 710 SCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 710 ~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
++...+ ..++||||+++++|.+++.....++.+++++++|||+. +++|||+||+|||+ +++.++|+|||++
T Consensus 404 ~~~~~~-----~~~lv~E~~~g~~L~~~l~~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla 474 (535)
T PRK09605 404 YDVDPE-----EKTIVMEYIGGKDLKDVLEGNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLG 474 (535)
T ss_pred EEEeCC-----CCEEEEEecCCCcHHHHHHHHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccc
Confidence 665432 25899999999999999876667788999999999998 99999999999999 5779999999999
Q ss_pred ccc
Q 002376 790 RFL 792 (929)
Q Consensus 790 ~~~ 792 (929)
+..
T Consensus 475 ~~~ 477 (535)
T PRK09605 475 KYS 477 (535)
T ss_pred ccC
Confidence 854
No 438
>PRK10345 hypothetical protein; Provisional
Probab=99.60 E-value=2e-15 Score=153.46 Aligned_cols=122 Identities=18% Similarity=0.249 Sum_probs=92.7
Q ss_pred CCCceeecccCceeEEecccc-------------CcHHHHHHHHHHHHcc-----CCccccceeeecccCCCCCcce-EE
Q 002376 663 FSHENLIGSGSFGSVLHNERT-------------GSWKSFIAECETLRNV-----RHRNLVKLITSCSSLDSKNMEF-LA 723 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~-------------~~~~~~~~E~~~l~~l-----~Hpniv~l~~~~~~~~~~~~~~-~~ 723 (929)
++..+.||+|+||.||.-... ...+.+.+|+.+++.+ .||||++++|++.+.. +.+. +.
T Consensus 4 L~~~~~LG~G~~~~Vy~hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~--g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC--GTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEECCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC--CCeEEEE
Confidence 345678999999999962211 1356789999999999 5799999999986543 2234 34
Q ss_pred EEEEe--cCCCCcccccccccc-----ccccHHHHH-HHhhhCCCCCEEecCCCCCCeeecC----CCceEEeccccc
Q 002376 724 LVYEF--LSNGSLGDWIHGERK-----NELDITSAL-DYLHNDCEVPVVHSDLKPGNILLDE----EMTAKVGDFGLA 789 (929)
Q Consensus 724 lV~e~--~~~gsL~~~l~~~~~-----~~~~ia~aL-~yLH~~~~~~iiHrDlk~~NILl~~----~~~~ki~DfGla 789 (929)
+|+|| +++|+|.+++.+.+. ...+++.++ +|||+. +|+||||||+|||++. ++.++|+||+-+
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred EEecCCCCcchhHHHHHHcccccHhHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 89999 558999999964321 235667677 999998 9999999999999974 348999995444
No 439
>PLN03150 hypothetical protein; Provisional
Probab=99.55 E-value=1e-14 Score=173.38 Aligned_cols=115 Identities=33% Similarity=0.533 Sum_probs=100.9
Q ss_pred CccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCC
Q 002376 482 NVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLT 561 (929)
Q Consensus 482 ~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 561 (929)
.++.|+|++|.++|.+|..++.+++|+.|+|++|+|+|.+|..++.+++|+.|||++|+++|.+|..+.++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 36788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCcccCCCCC--CCCCCCcccccCCCCCcCCC---CCC
Q 002376 562 FNNLEGVVPSEG--IFRNMSNVHLKGNPKLCLQL---GCE 596 (929)
Q Consensus 562 ~N~l~~~~p~~~--~~~~l~~l~l~~N~~~c~~~---~c~ 596 (929)
+|+++|.+|..- .+.++..+++.+|+.+|+.+ .|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCCCCCCc
Confidence 999999998752 23455678899999999875 575
No 440
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.55 E-value=4.2e-15 Score=149.82 Aligned_cols=116 Identities=19% Similarity=0.188 Sum_probs=84.4
Q ss_pred ceeecccCceeEEeccccC-----------c-------------HHHH-----------------HHHHHHHHccCCccc
Q 002376 666 ENLIGSGSFGSVLHNERTG-----------S-------------WKSF-----------------IAECETLRNVRHRNL 704 (929)
Q Consensus 666 ~~~iG~G~~g~Vy~~~~~~-----------~-------------~~~~-----------------~~E~~~l~~l~Hpni 704 (929)
...||+|+||.||+|.... . ...| .+|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3579999999999997641 0 0122 239999999988876
Q ss_pred cceeeecccCCCCCcceEEEEEEecCCCCcccc-ccc-------cccccccHHHHHHHh-hhCCCCCEEecCCCCCCeee
Q 002376 705 VKLITSCSSLDSKNMEFLALVYEFLSNGSLGDW-IHG-------ERKNELDITSALDYL-HNDCEVPVVHSDLKPGNILL 775 (929)
Q Consensus 705 v~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~-l~~-------~~~~~~~ia~aL~yL-H~~~~~~iiHrDlk~~NILl 775 (929)
.....+.. . ..++||||++++++... +.. ...++.|++.||+|+ |+. +|+||||||+||++
T Consensus 82 ~~p~~~~~--~-----~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli 151 (190)
T cd05147 82 PCPEPILL--K-----SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLY 151 (190)
T ss_pred CCCcEEEe--c-----CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEE
Confidence 43332211 1 13899999998877544 222 123367899999999 576 89999999999999
Q ss_pred cCCCceEEecccccccc
Q 002376 776 DEEMTAKVGDFGLARFL 792 (929)
Q Consensus 776 ~~~~~~ki~DfGla~~~ 792 (929)
+ ++.++++|||+|...
T Consensus 152 ~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 152 H-DGKLYIIDVSQSVEH 167 (190)
T ss_pred E-CCcEEEEEccccccC
Confidence 8 478999999999743
No 441
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.54 E-value=5.8e-16 Score=171.73 Aligned_cols=161 Identities=27% Similarity=0.240 Sum_probs=126.5
Q ss_pred ecccCceeEEecccc---------------------CcHHHHHHHHHHHHccC-CccccceeeecccCCCCCcceEEEEE
Q 002376 669 IGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 669 iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
+|+|+||+|+.++.. +.......|..++..++ ||.+|++...+.. ....++++
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt-----~~kl~l~l 76 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQT-----DGKLYLIL 76 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecc-----ccchhHhh
Confidence 688999998654321 11224556888899997 9999999887744 33489999
Q ss_pred EecCCCCccccccccccc--------cccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 727 EFLSNGSLGDWIHGERKN--------ELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~~~--------~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
+|..+|++...+...... ...++-|++++|.. +|+|||+|++||+++.+|.+|+.|||+++..-+.
T Consensus 77 d~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~--- 150 (612)
T KOG0603|consen 77 DFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKE--- 150 (612)
T ss_pred hhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhh---
Confidence 999999999888755433 34678899999998 9999999999999999999999999999865321
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVES 849 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~ 849 (929)
...+||..|||||++. .....+|-||+|+.++++.+...++.
T Consensus 151 -------~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~ 192 (612)
T KOG0603|consen 151 -------KIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFG 192 (612)
T ss_pred -------hhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCc
Confidence 1128999999999987 57788999999988887665544443
No 442
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.54 E-value=1.1e-14 Score=147.57 Aligned_cols=116 Identities=20% Similarity=0.172 Sum_probs=87.8
Q ss_pred ceeecccCceeEEecccc-C----------c------------------------------HHHHHHHHHHHHccCCccc
Q 002376 666 ENLIGSGSFGSVLHNERT-G----------S------------------------------WKSFIAECETLRNVRHRNL 704 (929)
Q Consensus 666 ~~~iG~G~~g~Vy~~~~~-~----------~------------------------------~~~~~~E~~~l~~l~Hpni 704 (929)
...||+|+||.||+|... + . ...+.+|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 367999999999998764 0 0 0113578899999999987
Q ss_pred cceeeecccCCCCCcceEEEEEEecCCCCcccc-ccc-------cccccccHHHHHHHhhh-CCCCCEEecCCCCCCeee
Q 002376 705 VKLITSCSSLDSKNMEFLALVYEFLSNGSLGDW-IHG-------ERKNELDITSALDYLHN-DCEVPVVHSDLKPGNILL 775 (929)
Q Consensus 705 v~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~-l~~-------~~~~~~~ia~aL~yLH~-~~~~~iiHrDlk~~NILl 775 (929)
.....+... ..++||||++++++... +.. ...++.+++.|+.|+|+ . +|+||||||+||++
T Consensus 82 ~~p~~~~~~-------~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll 151 (190)
T cd05145 82 PVPEPILLK-------KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILY 151 (190)
T ss_pred CCceEEEec-------CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEE
Confidence 544443321 13899999998755332 322 12346789999999999 7 99999999999999
Q ss_pred cCCCceEEecccccccc
Q 002376 776 DEEMTAKVGDFGLARFL 792 (929)
Q Consensus 776 ~~~~~~ki~DfGla~~~ 792 (929)
+ ++.++|+|||+|+.+
T Consensus 152 ~-~~~~~liDFG~a~~~ 167 (190)
T cd05145 152 H-DGKPYIIDVSQAVEL 167 (190)
T ss_pred E-CCCEEEEEcccceec
Confidence 9 789999999999865
No 443
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.54 E-value=1e-15 Score=177.55 Aligned_cols=211 Identities=22% Similarity=0.300 Sum_probs=141.2
Q ss_pred CCCCCceeecccCceeEEeccccCcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEecCCCCccccccc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTGSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG 740 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~ 740 (929)
.+|..++.|-.|+||.||..+++...+.|...+.. +.+--+||..+.+. .+.| |+-...++.
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~lilRnilt~a~n-----------pfvv------gDc~tllk~ 144 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QNLILRNILTFAGN-----------PFVV------GDCATLLKN 144 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcccc-cchhhhccccccCC-----------ccee------chhhhhccc
Confidence 47888999999999999999999888888752210 11112233333222 2334 555555655
Q ss_pred cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc---------cCCCCCccccceeccc
Q 002376 741 ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER---------VDNQSSISSTHVFMGS 811 (929)
Q Consensus 741 ~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~---------~~~~~~~~~~~~~~gt 811 (929)
....-.+.+.|++|+|+. +|+|||+||+|.+|+.-|.+|+.|||+++..-.. ............++||
T Consensus 145 ~g~lPvdmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgT 221 (1205)
T KOG0606|consen 145 IGPLPVDMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGT 221 (1205)
T ss_pred CCCCcchhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCC
Confidence 555556668999999998 9999999999999999999999999999864211 1111111233567999
Q ss_pred cccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhh-hcCCchh-hhccChHHHHhhcccchhhhhhhHHHHHHHHHHh
Q 002376 812 IGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVE-SNLPENV-LQVLDPELRQLMTSNESQTIQLHDCLITIIGSVG 889 (929)
Q Consensus 812 ~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~-~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 889 (929)
+.|+|||++....|+..+|=|++|++.|++.+...++ +..|+.+ .+++... ..+..+++. ...-+++++
T Consensus 222 PeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~-i~wpE~dea--------~p~Ea~dli 292 (1205)
T KOG0606|consen 222 PEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDD-IEWPEEDEA--------LPPEAQDLI 292 (1205)
T ss_pred ccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhh-ccccccCcC--------CCHHHHHHH
Confidence 9999999999999999999999999999876665543 3334432 2222221 122211111 112223366
Q ss_pred ccccCCCCCCCC
Q 002376 890 LSCTTESPGGRI 901 (929)
Q Consensus 890 ~~Cl~~dP~~RP 901 (929)
.+.++.+|..|-
T Consensus 293 ~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 293 EQLLRQNPLCRL 304 (1205)
T ss_pred HHHHHhChHhhc
Confidence 688889999985
No 444
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.50 E-value=3.5e-14 Score=138.63 Aligned_cols=189 Identities=23% Similarity=0.289 Sum_probs=135.6
Q ss_pred hHHHHHhhCCCCCceeecccCceeEEeccccCc--------------HHHHHHHHHHHHccCCc-cccceeeecccCCCC
Q 002376 653 YDELRRATGNFSHENLIGSGSFGSVLHNERTGS--------------WKSFIAECETLRNVRHR-NLVKLITSCSSLDSK 717 (929)
Q Consensus 653 ~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~--------------~~~~~~E~~~l~~l~Hp-niv~l~~~~~~~~~~ 717 (929)
.+++.+ .+.|...++||+|+||.+|.|..-.. .-+...|.++.+.++|- .|..+..|..+
T Consensus 8 ~~~~iv-~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e---- 82 (341)
T KOG1163|consen 8 LEELIV-GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTE---- 82 (341)
T ss_pred hhhhee-ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccc----
Confidence 344444 35899999999999999999876522 22466799999999874 44444444432
Q ss_pred CcceEEEEEEecCCCCccccccc--cc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC---CceEEec
Q 002376 718 NMEFLALVYEFLSNGSLGDWIHG--ER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE---MTAKVGD 785 (929)
Q Consensus 718 ~~~~~~lV~e~~~~gsL~~~l~~--~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~---~~~ki~D 785 (929)
..+-.+|||.. |.+|.+...- ++ ..+-|+..-++|+|.+ ++|||||||+|.|..-+ ..+.+.|
T Consensus 83 -~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LID 157 (341)
T KOG1163|consen 83 -KDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLID 157 (341)
T ss_pred -cccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEe
Confidence 33458999998 7899887652 11 2256888899999998 89999999999998633 3688999
Q ss_pred cccccccccccC-CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcC
Q 002376 786 FGLARFLLERVD-NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNL 851 (929)
Q Consensus 786 fGla~~~~~~~~-~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~ 851 (929)
||+|+.+..-.. .+..........||.+|.+--...+...+.+.|+-|.|-++..+.-..++|..+
T Consensus 158 FGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQgl 224 (341)
T KOG1163|consen 158 FGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGL 224 (341)
T ss_pred ccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccccc
Confidence 999997643211 122223345678999999987777777889999999997766665555565544
No 445
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.49 E-value=3.5e-14 Score=145.32 Aligned_cols=115 Identities=23% Similarity=0.313 Sum_probs=93.0
Q ss_pred eecccCceeEEeccccC----------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEE
Q 002376 668 LIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 668 ~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV 725 (929)
.||+|+||.||+|.+.+ ..+++.+|+++++.++|+++.....++...+ ..++|
T Consensus 1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~-----~~~lv 75 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPD-----NKTIV 75 (199)
T ss_pred CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC-----CCEEE
Confidence 48999999999998441 0145668999999999887554444443222 25899
Q ss_pred EEecCCCCccccccccc-cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 726 YEFLSNGSLGDWIHGER-KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~~~-~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
|||+++++|.+++.... ..+.+++.+++++|+. +++|||+||.||+++ ++.+++.|||+++.
T Consensus 76 ~e~~~g~~l~~~~~~~~~~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 76 MEYIEGKPLKDVIEEGNDELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred EEEECCccHHHHHhhcHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999999999876544 5688999999999998 999999999999999 78999999999874
No 446
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.48 E-value=1.8e-15 Score=164.65 Aligned_cols=116 Identities=26% Similarity=0.428 Sum_probs=94.3
Q ss_pred ceEEEEEEecCCCCccccccccc-----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER-----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~-----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGl 788 (929)
.+.|+.|++|...+|.+|+...+ .+..|++.|++| + +.+|||+||.||....+..+||.|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhh
Confidence 35899999999999999996433 225678889999 4 899999999999999999999999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCc
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEF 841 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~ 841 (929)
.................+..+||..||+||.+.+..|+.|+|||++|.+++|+
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL 455 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAEL 455 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHH
Confidence 87664332111222234556899999999999999999999999999887774
No 447
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.48 E-value=4.8e-14 Score=145.74 Aligned_cols=116 Identities=22% Similarity=0.322 Sum_probs=95.1
Q ss_pred eeecccCceeEEeccccC----------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 667 NLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
+.||+|++|.||+|...+ ....+.+|++++..++|+++.....++...+ ..++
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~-----~~~l 76 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPE-----NFII 76 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCC-----CCEE
Confidence 579999999999985431 0135778999999999999877766654322 2689
Q ss_pred EEEecCCCCccccccccc----cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 725 VYEFLSNGSLGDWIHGER----KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~----~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
||||+++++|.+++.... .++.+++.+++++|+. +++|||++|.||+++ ++.++++|||.++.
T Consensus 77 v~e~~~G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 77 VMEYIEGEPLKDLINSNGMEELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEEEeCCcCHHHHHHhccHHHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999999999886432 4567899999999998 999999999999999 78999999999874
No 448
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.47 E-value=4.6e-15 Score=161.18 Aligned_cols=196 Identities=30% Similarity=0.503 Sum_probs=161.8
Q ss_pred CCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCE
Q 002376 326 NSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQV 405 (929)
Q Consensus 326 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 405 (929)
.++.-...||+.|++. .+|..+..+. .|+.+.|..|.|. .+|..+.++..|++|||+.|+++ .+|..++.|+ |++
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~-~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFV-SLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKV 147 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHH-HHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-cee
Confidence 3455567899999998 8999988887 7999999999998 78999999999999999999998 7888888886 999
Q ss_pred EEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccE
Q 002376 406 LGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVT 485 (929)
Q Consensus 406 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~ 485 (929)
|-+++|+++ .+|+.++.+..|..||.+.|.+. .+|..++++.+|+.|.+..|++. .+|+++..| .|..
T Consensus 148 li~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~---------~lp~El~~L-pLi~ 215 (722)
T KOG0532|consen 148 LIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE---------DLPEELCSL-PLIR 215 (722)
T ss_pred EEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh---------hCCHHHhCC-ceee
Confidence 999999997 67888888899999999999998 67888899999999999999986 236666654 4888
Q ss_pred EEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCC---CCCCEEECCCCc
Q 002376 486 IDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAEL---KGLEVLDLSSNK 540 (929)
Q Consensus 486 LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~ 540 (929)
||+|.|+++ .+|-.|.+|+.|++|-|.+|.++ .+|..+... .-.++|+..-++
T Consensus 216 lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 216 LDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred eecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 999999998 78888999999999999999888 455554332 224556655553
No 449
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.47 E-value=8.8e-14 Score=142.07 Aligned_cols=127 Identities=19% Similarity=0.104 Sum_probs=97.0
Q ss_pred HHHHHhhCCCCCceeecccCceeEEeccccCc-------------------------------------HHHHHHHHHHH
Q 002376 654 DELRRATGNFSHENLIGSGSFGSVLHNERTGS-------------------------------------WKSFIAECETL 696 (929)
Q Consensus 654 ~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~-------------------------------------~~~~~~E~~~l 696 (929)
+++.+....|...+.||+|+||.||++..... ...+..|...+
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 34444444477789999999999999876310 01256788889
Q ss_pred HccCCcc--ccceeeecccCCCCCcceEEEEEEecCCCCcccccc--ccccccccHHHHHHHhhhCCCCCEEecCCCCCC
Q 002376 697 RNVRHRN--LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIH--GERKNELDITSALDYLHNDCEVPVVHSDLKPGN 772 (929)
Q Consensus 697 ~~l~Hpn--iv~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~--~~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~N 772 (929)
.++.|++ +.+.++.+ ..++||||+++++|.+... .....+.+++.++.++|+. +|+||||||+|
T Consensus 88 ~~l~~~~i~v~~~~~~~---------~~~lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~N 155 (198)
T cd05144 88 KALYEEGFPVPKPIDWN---------RHAVVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAYKH---GIIHGDLSEFN 155 (198)
T ss_pred HHHHHcCCCCCceeecC---------CceEEEEEeCCcchhhccccccHHHHHHHHHHHHHHHHHC---CCCcCCCCccc
Confidence 9888874 44444321 2489999999999987653 1223467899999999997 99999999999
Q ss_pred eeecCCCceEEecccccccc
Q 002376 773 ILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 773 ILl~~~~~~ki~DfGla~~~ 792 (929)
|++++++.++|+|||++...
T Consensus 156 ill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 156 ILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred EEEcCCCcEEEEECCccccC
Confidence 99999999999999999754
No 450
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.46 E-value=1.3e-13 Score=140.70 Aligned_cols=180 Identities=18% Similarity=0.254 Sum_probs=131.5
Q ss_pred CCCCceeecccCceeEEecccc--------------CcHHHHHHHHHHHHccC-CccccceeeecccCCCCCcceEEEEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERT--------------GSWKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~--------------~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
+|++.++||+|+||+++.|+.- ...-+..-|.+..+.+. .+.|..++.|- +...+-.||+
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFG-----qeG~~NiLVi 103 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFG-----QEGKYNILVI 103 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeec-----cccchhhhhh
Confidence 7888999999999999998753 22345677888888875 57777766553 2233458999
Q ss_pred EecCCCCccccccc--c-------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC-----ceEEecccccccc
Q 002376 727 EFLSNGSLGDWIHG--E-------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM-----TAKVGDFGLARFL 792 (929)
Q Consensus 727 e~~~~gsL~~~l~~--~-------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~-----~~ki~DfGla~~~ 792 (929)
|.. |.||.|...- + ..++.|+..-++|+|++ ..|.|||||+|.||..-+ .+.|.|||+|+.+
T Consensus 104 dLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Y 179 (449)
T KOG1165|consen 104 DLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEY 179 (449)
T ss_pred hhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhh
Confidence 998 7788877652 1 23467888899999998 899999999999997543 5899999999987
Q ss_pred ccccCC-CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhc
Q 002376 793 LERVDN-QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESN 850 (929)
Q Consensus 793 ~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~ 850 (929)
...... +..........||.+||+----.|+.-+.+-|.-++|-+.+.+.-+.++|..
T Consensus 180 rDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQG 238 (449)
T KOG1165|consen 180 RDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG 238 (449)
T ss_pred cCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccc
Confidence 543222 2222334556899999999888899999999999988543333334444433
No 451
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.41 E-value=8.1e-15 Score=159.29 Aligned_cols=169 Identities=30% Similarity=0.463 Sum_probs=82.6
Q ss_pred EEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcc
Q 002376 357 KLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNE 436 (929)
Q Consensus 357 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 436 (929)
..||+.|++. .+|..+..+..|+.+.|..|.+. .+|..++++..|.+|||+.|+++ ..|..++.|+ |+.|-+++|+
T Consensus 79 ~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNk 154 (722)
T KOG0532|consen 79 FADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNK 154 (722)
T ss_pred hhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCc
Confidence 4455555554 44444455555555555555554 44555555555555555555554 3444444443 4555555555
Q ss_pred cccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeeccccc
Q 002376 437 LTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQ 516 (929)
Q Consensus 437 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 516 (929)
++ .+|..++.+..|..||.+.|.+. .+|..++.+..|+.|.+..|++. .+|..+..| .|..||+|.|+
T Consensus 155 l~-~lp~~ig~~~tl~~ld~s~nei~---------slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNk 222 (722)
T KOG0532|consen 155 LT-SLPEEIGLLPTLAHLDVSKNEIQ---------SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNK 222 (722)
T ss_pred cc-cCCcccccchhHHHhhhhhhhhh---------hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCc
Confidence 54 34444444445555555555442 22444555555555555555554 333344422 34455555555
Q ss_pred ccccCCccccCCCCCCEEECCCCcCC
Q 002376 517 FSGPIPNIVAELKGLEVLDLSSNKLS 542 (929)
Q Consensus 517 l~~~~p~~~~~l~~L~~L~Ls~N~l~ 542 (929)
++ .+|-.|.+|+.|++|-|.+|.|.
T Consensus 223 is-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 223 IS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred ee-ecchhhhhhhhheeeeeccCCCC
Confidence 54 44445555555555555555554
No 452
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.39 E-value=2.1e-13 Score=162.34 Aligned_cols=235 Identities=15% Similarity=0.116 Sum_probs=151.7
Q ss_pred HHHHhhCCCCCceeecccCceeEEeccccCcHH------------HHHHHHHHHHccC---CccccceeeecccCCCCCc
Q 002376 655 ELRRATGNFSHENLIGSGSFGSVLHNERTGSWK------------SFIAECETLRNVR---HRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 655 ~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~------------~~~~E~~~l~~l~---Hpniv~l~~~~~~~~~~~~ 719 (929)
+.+...+.|.+.+.||+|+||+||+|....... +|--=.+++.+++ -+-|..+...+.-.+.
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~--- 768 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNA--- 768 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCc---
Confidence 444556678888999999999999998763110 1111223444444 1234444433322222
Q ss_pred ceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeec-------CCCceEEe
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLD-------EEMTAKVG 784 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~-------~~~~~ki~ 784 (929)
-++|+||.+.|+|.+++...+ .+..++++-+++||.. +|||+||||.|.||. +...++|+
T Consensus 769 --S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 769 --SVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred --ceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEE
Confidence 489999999999999987433 2357899999999998 999999999999994 23468999
Q ss_pred ccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHH
Q 002376 785 DFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELR 864 (929)
Q Consensus 785 DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 864 (929)
|||.+..+.- .........+++|-++-.+|+..|++++..+|-|.+..+++-|..+..+. .... ....++..+.
T Consensus 844 DfG~siDm~l----fp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-~~~g-~~~~~~~~~~ 917 (974)
T KOG1166|consen 844 DFGRSIDMKL----FPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-VKNG-SSWMVKTNFP 917 (974)
T ss_pred ecccceeeeE----cCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-hcCC-cceeccccch
Confidence 9999976532 12223445678999999999999999999999987765544444444443 1111 1111222222
Q ss_pred HhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 865 QLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
... -..+..++....+++|-..=|...++...++++...
T Consensus 918 Ry~-------------~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~ 956 (974)
T KOG1166|consen 918 RYW-------------KRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAE 956 (974)
T ss_pred hhh-------------hHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHH
Confidence 211 011222355567775555567777777777776554
No 453
>smart00090 RIO RIO-like kinase.
Probab=99.39 E-value=5.5e-13 Score=139.19 Aligned_cols=118 Identities=23% Similarity=0.143 Sum_probs=89.3
Q ss_pred CCCCceeecccCceeEEecc-cc-------------Cc---------------------------HHHHHHHHHHHHccC
Q 002376 662 NFSHENLIGSGSFGSVLHNE-RT-------------GS---------------------------WKSFIAECETLRNVR 700 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~-~~-------------~~---------------------------~~~~~~E~~~l~~l~ 700 (929)
.|+..+.||+|+||.||+|. .. .. ...+.+|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46677899999999999997 21 00 012457999999997
Q ss_pred Ccc--ccceeeecccCCCCCcceEEEEEEecCCCCccccccc--------cccccccHHHHHHHhhhCCCCC-EEecCCC
Q 002376 701 HRN--LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDCEVP-VVHSDLK 769 (929)
Q Consensus 701 Hpn--iv~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~--------~~~~~~~ia~aL~yLH~~~~~~-iiHrDlk 769 (929)
+.. +.+.+++. ..++||||++++++..+... ...++.+++.|++|||+. + |+|||+|
T Consensus 109 ~~~i~~p~~~~~~---------~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dik 176 (237)
T smart00090 109 EAGVPVPKPIAWR---------RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLS 176 (237)
T ss_pred hcCCCCCeeeEec---------CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCC
Confidence 632 33333321 14899999999888765421 124567899999999998 8 9999999
Q ss_pred CCCeeecCCCceEEecccccccc
Q 002376 770 PGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 770 ~~NILl~~~~~~ki~DfGla~~~ 792 (929)
|+||+++ ++.++++|||.|...
T Consensus 177 p~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 177 EYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred hhhEEEE-CCCEEEEEChhhhcc
Confidence 9999999 889999999998754
No 454
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.38 E-value=1.5e-13 Score=140.15 Aligned_cols=197 Identities=23% Similarity=0.288 Sum_probs=135.3
Q ss_pred HHHccCCccccceeeecccCCCCCcceEEEEEEecCCCCccccccccc------------cccccHHHHHHHhhhCCCCC
Q 002376 695 TLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER------------KNELDITSALDYLHNDCEVP 762 (929)
Q Consensus 695 ~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~------------~~~~~ia~aL~yLH~~~~~~ 762 (929)
-+-++.|-|+|+++.|+.+....+..+..++.|||+.|++.++|++.+ ++..||..||.|||+. .|+
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Pp 198 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCc
Confidence 345567999999999998876656677899999999999999998543 3467899999999994 789
Q ss_pred EEecCCCCCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcc
Q 002376 763 VVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFN 842 (929)
Q Consensus 763 iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~ 842 (929)
|+|+++..+-|.+..+|-+||.--.-..... . ...........-.|-++|-|||+-.....+..+|||+||+.+.++.
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~-s-~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHP-S-VNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccch-h-hhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 9999999999999999999985322111000 0 0000011122345788999999988888899999999998777766
Q ss_pred hhHHhhhcCCc--hhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 843 IVKWVESNLPE--NVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 843 ~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
+.+.-...... ...+-+...+.. .....+ ++.+..|++.+|..||+|++.+.
T Consensus 277 ilEiq~tnseS~~~~ee~ia~~i~~--len~lq------------r~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEVEENIANVIIG--LENGLQ------------RGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred HheeccCCCcceeehhhhhhhheee--ccCccc------------cCcCcccccCCCCCCcchhhhhc
Confidence 55544322221 111111111111 011111 12667999999999999998753
No 455
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.34 E-value=4.2e-14 Score=164.31 Aligned_cols=225 Identities=19% Similarity=0.182 Sum_probs=143.2
Q ss_pred CCCCceeecccCceeEEeccccC---------------cHHHHHHHHHH--HHccCCccccceeeecccCCCCCcceEEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECET--LRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~--l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
+|...+.+|++.|=+|.+|++.. ..+.|.++++- ....+|||++++..+-.. ....||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t-----~kAAyl 98 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVT-----DKAAYL 98 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHh-----hHHHHH
Confidence 45667889999998888887662 23455554443 445689999998776432 233688
Q ss_pred EEEecCCCCccccccc--------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccccc
Q 002376 725 VYEFLSNGSLGDWIHG--------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~--------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 796 (929)
|=+|..+ +|+|.+.. .+.++.|+..|+.-+|.. +|+|+|||.+||||+.--.+.++||.--|...-..
T Consensus 99 vRqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 99 VRQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred HHHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 8888854 89888763 345688999999999998 99999999999999999999999998766432111
Q ss_pred CCCCC-ccccceeccccccccccccCCC----------C-CCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHH-
Q 002376 797 DNQSS-ISSTHVFMGSIGYVPPEYGLGE----------R-PSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPEL- 863 (929)
Q Consensus 797 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l- 863 (929)
++... ......-.--..|+|||-+... . .+++-||+|.||+..|+.+ .+.-+....+.+.-+-
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~----Eg~PlF~LSQL~aYr~~ 250 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFL----EGRPLFTLSQLLAYRSG 250 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHh----cCCCcccHHHHHhHhcc
Confidence 11110 0000001112369999965431 1 5678899999987655322 2222222222111100
Q ss_pred -----HHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 864 -----RQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 864 -----~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
...+.+-+.. -++.++..|++.||++|-++++.++.
T Consensus 251 ~~~~~e~~Le~Ied~----------~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 251 NADDPEQLLEKIEDV----------SLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred CccCHHHHHHhCcCc----------cHHHHHHHHHccCchhccCHHHHHHh
Confidence 0001111110 12336669999999999999999987
No 456
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.33 E-value=1.4e-12 Score=148.46 Aligned_cols=180 Identities=41% Similarity=0.628 Sum_probs=99.4
Q ss_pred CcccEEEeeCCCCCcccCccccCCC-CCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceec
Q 002376 377 RSLTLLDLSYNSISGEIPIEIGQLQ-GLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSID 455 (929)
Q Consensus 377 ~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 455 (929)
+.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..+..+++|+.|++++|+++ .+|...+..+.|+.|+
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ 192 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLD 192 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhee
Confidence 44555555555554 3333444442 5555555555554 33344555555666666666655 3343333555566666
Q ss_pred ccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEE
Q 002376 456 LSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLD 535 (929)
Q Consensus 456 Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 535 (929)
+++|+++ .+ |..+.....|++|++++|++. .++..+.++..+..|.+++|++.. ++..++.+++|++|+
T Consensus 193 ls~N~i~-~l--------~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~~~~~l~~l~~L~ 261 (394)
T COG4886 193 LSGNKIS-DL--------PPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPESIGNLSNLETLD 261 (394)
T ss_pred ccCCccc-cC--------chhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-ccchhccccccceec
Confidence 6666654 22 443344445666666666433 344556666666666666666652 355566666677777
Q ss_pred CCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCCCC
Q 002376 536 LSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSE 572 (929)
Q Consensus 536 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 572 (929)
+++|.++. ++. +..+.+|+.|++++|.++..+|..
T Consensus 262 ~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 262 LSNNQISS-ISS-LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred cccccccc-ccc-ccccCccCEEeccCccccccchhh
Confidence 77776663 333 666666777777777666655543
No 457
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.31 E-value=4.1e-12 Score=132.91 Aligned_cols=101 Identities=20% Similarity=0.188 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHccCCccc--cceeeecccCCCCCcceEEEEEEecCC-CCccccccccc---cccccHHHHHHHhhhCCC
Q 002376 687 KSFIAECETLRNVRHRNL--VKLITSCSSLDSKNMEFLALVYEFLSN-GSLGDWIHGER---KNELDITSALDYLHNDCE 760 (929)
Q Consensus 687 ~~~~~E~~~l~~l~Hpni--v~l~~~~~~~~~~~~~~~~lV~e~~~~-gsL~~~l~~~~---~~~~~ia~aL~yLH~~~~ 760 (929)
..+.+|++++.+++|+++ ++.+++..... ......++||||+++ .+|.+++.... ....+++.++.+||+.
T Consensus 85 ~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~-~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~~-- 161 (239)
T PRK01723 85 TRAFAEFRLLAQLYEAGLPVPRPIAARVVRH-GLFYRADILIERIEGARDLVALLQEAPLSEEQWQAIGQLIARFHDA-- 161 (239)
T ss_pred hHHHHHHHHHHHHHhCCCCCceeEeeeeeec-CcceeeeEEEEecCCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHC--
Confidence 356789999999998875 66676644322 112224699999997 68888875432 2256799999999998
Q ss_pred CCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 761 ~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
+|+|||+||.|||++.++.++|+|||.++.
T Consensus 162 -GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 162 -GVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred -CCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 999999999999999989999999999874
No 458
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.29 E-value=3.8e-12 Score=123.58 Aligned_cols=122 Identities=20% Similarity=0.221 Sum_probs=97.1
Q ss_pred ceeecccCceeEEeccccC----------c--HHHHHHHHHHHHccCC--ccccceeeecccCCCCCcceEEEEEEecCC
Q 002376 666 ENLIGSGSFGSVLHNERTG----------S--WKSFIAECETLRNVRH--RNLVKLITSCSSLDSKNMEFLALVYEFLSN 731 (929)
Q Consensus 666 ~~~iG~G~~g~Vy~~~~~~----------~--~~~~~~E~~~l~~l~H--pniv~l~~~~~~~~~~~~~~~~lV~e~~~~ 731 (929)
.+.||+|.++.||++...+ . ...+.+|+..++.++| +.+.++++++... ...+++|||+++
T Consensus 3 ~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~-----~~~~~v~e~~~g 77 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKDEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESD-----GWSYLLMEWIEG 77 (155)
T ss_pred ceecccccccceEEEEecCCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC-----CccEEEEEecCC
Confidence 4679999999999887631 1 2478999999999987 4888888877432 347999999998
Q ss_pred CCccccc-cccccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 732 GSLGDWI-HGERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 732 gsL~~~l-~~~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
+.+..+- ........+++++++++|.....+++|||+||+||++++.+.+++.|||.++..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 78 ETLDEVSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred eecccCCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 8887541 112234678999999999865557999999999999999899999999998753
No 459
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.29 E-value=4.8e-12 Score=144.15 Aligned_cols=201 Identities=37% Similarity=0.545 Sum_probs=157.2
Q ss_pred EEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCC-cccEEEeeCCCCCcccCccccCCCCCCEEEecC
Q 002376 332 YLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLR-SLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAG 410 (929)
Q Consensus 332 ~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 410 (929)
.++++.|.+...+ ..+.... .++.|++.+|.++ .+|.....++ +|+.|++++|++. .+|..++.+++|+.|++++
T Consensus 97 ~l~~~~~~~~~~~-~~~~~~~-~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLRSNI-SELLELT-NLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccccCc-hhhhccc-ceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCC
Confidence 5777777774332 2333333 6888889988888 5666667774 8999999999998 5667788899999999999
Q ss_pred CcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecC
Q 002376 411 NEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSD 490 (929)
Q Consensus 411 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~ 490 (929)
|+++ .+|.....++.|+.|++++|+++ .+|........|++|++++|++. ..+..+..+.++..+.+++
T Consensus 173 N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~---------~~~~~~~~~~~l~~l~l~~ 241 (394)
T COG4886 173 NDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII---------ELLSSLSNLKNLSGLELSN 241 (394)
T ss_pred chhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce---------ecchhhhhcccccccccCC
Confidence 9998 45655557889999999999998 56666556667999999999532 1266778888999999999
Q ss_pred CCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccc
Q 002376 491 NSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQ 550 (929)
Q Consensus 491 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 550 (929)
|++. .++..++++.++++|++++|+++...+ ++.+.+|+.||+++|.++...|....
T Consensus 242 n~~~-~~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 242 NKLE-DLPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred ceee-eccchhccccccceecccccccccccc--ccccCccCEEeccCccccccchhhhc
Confidence 9887 347788999999999999999985444 88999999999999999977665543
No 460
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.28 E-value=9.8e-13 Score=138.07 Aligned_cols=209 Identities=18% Similarity=0.135 Sum_probs=117.7
Q ss_pred CCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCC-----------ccccceeeecc
Q 002376 663 FSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRH-----------RNLVKLITSCS 712 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~H-----------pniv~l~~~~~ 712 (929)
+...+.||.|+++.||.+++.. ..+++.+|.-....+.+ ..++++--.-.
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 3456889999999999988762 35667777655544322 22222211111
Q ss_pred cCCC------CCcc-----eEEEEEEecCCCCccccccc-----cc----------cccccHHHHHHHhhhCCCCCEEec
Q 002376 713 SLDS------KNME-----FLALVYEFLSNGSLGDWIHG-----ER----------KNELDITSALDYLHNDCEVPVVHS 766 (929)
Q Consensus 713 ~~~~------~~~~-----~~~lV~e~~~~gsL~~~l~~-----~~----------~~~~~ia~aL~yLH~~~~~~iiHr 766 (929)
.... .+.. ..+++|+-+ .+||.+++.. .. ....|+.+.+++||+. |+||+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEec
Confidence 1000 0001 236778877 5688877641 00 1136788999999998 99999
Q ss_pred CCCCCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCC--------CCCCCCCCCCCcCCC
Q 002376 767 DLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE--------RPSTAGDVPTSESFA 838 (929)
Q Consensus 767 Dlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--------~~~~~~DV~s~g~~~ 838 (929)
||||+|++++.+|.++++||+........ ......+..|.+||..... .++.+.|.|++|+++
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~---------~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~l 240 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTR---------YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITL 240 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEE---------EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCce---------eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHH
Confidence 99999999999999999999977643211 0102345789999976432 478899999999544
Q ss_pred CCcchhHHhhhcCCch--hhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCC
Q 002376 839 GEFNIVKWVESNLPEN--VLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGR 900 (929)
Q Consensus 839 ~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~R 900 (929)
+.+....+|.. ..+..+....... . .+++.++.|+...++++|++|
T Consensus 241 -----y~lWC~~lPf~~~~~~~~~~~~f~~C----------~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 241 -----YSLWCGRLPFGLSSPEADPEWDFSRC----------R-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp -----HHHHHSS-STCCCGGGSTSGGGGTTS----------S----HHHHHHHHHHT-SSGGGS
T ss_pred -----HHHHHccCCCCCCCccccccccchhc----------C-CcCHHHHHHHHHHccCCcccC
Confidence 44444555542 1111111111111 1 244555567779999999988
No 461
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.26 E-value=7.5e-13 Score=155.12 Aligned_cols=231 Identities=25% Similarity=0.264 Sum_probs=155.8
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccC-CccccceeeecccCCCCCcc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~~ 720 (929)
..|...+.||+|+|+.|-...... ..+....|..+-..+. |+|++.+++..... .
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~-----~ 94 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSP-----R 94 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCC-----c
Confidence 356667789999999985544321 1222334666666666 99999999987544 3
Q ss_pred eEEEEEEecCCCCccccc-ccc---------ccccccHHHHHHHhh-hCCCCCEEecCCCCCCeeecCCC-ceEEecccc
Q 002376 721 FLALVYEFLSNGSLGDWI-HGE---------RKNELDITSALDYLH-NDCEVPVVHSDLKPGNILLDEEM-TAKVGDFGL 788 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l-~~~---------~~~~~~ia~aL~yLH-~~~~~~iiHrDlk~~NILl~~~~-~~ki~DfGl 788 (929)
..+++.||..+|++.+.+ +.. ..+..|+..|+.|+| .. ++.|||+||+|.+++..+ ..|++|||+
T Consensus 95 ~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~ 171 (601)
T KOG0590|consen 95 SYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGL 171 (601)
T ss_pred ccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchh
Confidence 479999999999999988 422 233568889999999 65 899999999999999999 999999999
Q ss_pred ccccccccCCCCCccccceecc-ccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHh
Q 002376 789 ARFLLERVDNQSSISSTHVFMG-SIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQL 866 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 866 (929)
|..+... ..........+| ++.|+|||...+. ......|+||.|+.+..+...+.++..... .+.....+
T Consensus 172 At~~~~~---~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~-----~~~~~~~~ 243 (601)
T KOG0590|consen 172 ATAYRNK---NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSR-----KDGRYSSW 243 (601)
T ss_pred hcccccc---CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccc-----ccccceee
Confidence 9876431 111222344578 9999999998885 458889999999887776665555433322 11111111
Q ss_pred hcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHH
Q 002376 867 MTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREAL 907 (929)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~ 907 (929)
...........+..+..-..++..+++..+|+.|.+.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 244 KSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred cccccccccCccccCChhhhhcccccccCCchhcccccccc
Confidence 11110001111112222222266688889999999987764
No 462
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.20 E-value=1.7e-11 Score=124.05 Aligned_cols=67 Identities=27% Similarity=0.233 Sum_probs=54.8
Q ss_pred EEEEEEecCCCC-----cccccc--ccccccccHHHHHHHhhh-CCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 722 LALVYEFLSNGS-----LGDWIH--GERKNELDITSALDYLHN-DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 722 ~~lV~e~~~~gs-----L~~~l~--~~~~~~~~ia~aL~yLH~-~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.++||||++++. +.+... ..+..+.+++.++.++|. . +|+|||+||+||+++ ++.++++|||.++..
T Consensus 90 ~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 90 HVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred CEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE-CCcEEEEECcccccc
Confidence 589999999853 433322 234457789999999998 6 999999999999999 889999999999754
No 463
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.11 E-value=2e-11 Score=122.93 Aligned_cols=137 Identities=31% Similarity=0.351 Sum_probs=84.0
Q ss_pred ccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCC
Q 002376 419 NSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLP 498 (929)
Q Consensus 419 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p 498 (929)
..+..+..|+.+|||+|.|+ .+..+..-.+.++.|++|+|.|.. + ..+..+.+|+.||||+|.++ .+.
T Consensus 278 ~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v---------~nLa~L~~L~~LDLS~N~Ls-~~~ 345 (490)
T KOG1259|consen 278 VSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-V---------QNLAELPQLQLLDLSGNLLA-ECV 345 (490)
T ss_pred EecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceee-e---------hhhhhcccceEeecccchhH-hhh
Confidence 33444456667777777776 455555556667777777776652 1 23555666777777777666 344
Q ss_pred cchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcC-CcccccCCCCCeEeCCCCcCcccC
Q 002376 499 NSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSI-PSDLQNLQALRSLNLTFNNLEGVV 569 (929)
Q Consensus 499 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~ 569 (929)
.+-..+-+.+.|.|+.|.|... +.++.+-+|..||+++|++.... -..+++++-|+.+.|.+|.+++.+
T Consensus 346 Gwh~KLGNIKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 346 GWHLKLGNIKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hhHhhhcCEeeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 4445566667777777776532 34556667777777777765322 235666777777777777776543
No 464
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.11 E-value=8.9e-12 Score=132.23 Aligned_cols=212 Identities=21% Similarity=0.205 Sum_probs=104.3
Q ss_pred CCCCCCCEEEeecCCCCCCCC--cCCCCCCCCcEEeCCCCCCCCCcc--cccccccccceecccccccCCCCChhhhccC
Q 002376 92 GNLSFLRSIQLQNNKLSGNLP--REIGNLFRLRVLNISFNNLQGELP--VNISKLTELKMLDLMANKITGRVTDDQLRNL 167 (929)
Q Consensus 92 ~~L~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l 167 (929)
.++.+|+...|.+.... ..+ .....|++++.||||+|-|....| .....|++|+.|+||.|++.-.+....-..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 34556666666665554 222 234456666666666666553322 2334556666666666666432222222344
Q ss_pred CCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccC
Q 002376 168 RSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDT 247 (929)
Q Consensus 168 ~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~ 247 (929)
++|+.|.|+.+.|+..- +. .....+++|+.|+|..|....+.......+..|++|||++|++-. .+.
T Consensus 197 ~~lK~L~l~~CGls~k~---V~----~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~----- 263 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKD---VQ----WILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQ----- 263 (505)
T ss_pred hhhheEEeccCCCCHHH---HH----HHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-ccc-----
Confidence 55555666555543210 00 112234555566666554333333344445555556665555531 110
Q ss_pred CCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCC-ccCC-----CCCCCccceeccccccccCCCCCCCCccc
Q 002376 248 LPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGT-LPPG-----LGNLPFLRTYNIGFNKIVSSGDDEGLSFI 321 (929)
Q Consensus 248 l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~-----~~~l~~L~~L~L~~N~i~~~~~~~~~~~~ 321 (929)
-...+.++.|+.|+++.+.++.. .|+. ....++|++|++..|+|.... ..
T Consensus 264 ------------------~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~------sl 319 (505)
T KOG3207|consen 264 ------------------GYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWR------SL 319 (505)
T ss_pred ------------------ccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCcccccc------cc
Confidence 12234455555555555555432 1222 345566666666666664332 22
Q ss_pred cccCCCCCCCEEEccCCccc
Q 002376 322 TSLTNSTHLNYLALDGNQFE 341 (929)
Q Consensus 322 ~~~~~l~~L~~L~Ls~N~l~ 341 (929)
..+..+.+|+.|....|.++
T Consensus 320 ~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 320 NHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred chhhccchhhhhhccccccc
Confidence 34444556666666666665
No 465
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.10 E-value=1.8e-11 Score=123.36 Aligned_cols=132 Identities=33% Similarity=0.352 Sum_probs=69.9
Q ss_pred CCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCccccccccccee
Q 002376 375 RLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSI 454 (929)
Q Consensus 375 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 454 (929)
.+..|+.+|||+|.|+ .+..+..-++.++.|++|+|.|... +.+..+++|+.||||+|.++ .+-.+-..+-++++|
T Consensus 282 TWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 282 TWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTL 357 (490)
T ss_pred hHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeee
Confidence 3445555666666555 3444444555555555555555421 22555556666666666655 223333334455555
Q ss_pred cccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccC-CccccCCCCCCE
Q 002376 455 DLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPI-PNIVAELKGLEV 533 (929)
Q Consensus 455 ~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~ 533 (929)
.|+.|.|.. -+ .++.+-+|..||+++|+|...- -..+++++-|+.
T Consensus 358 ~La~N~iE~----------LS------------------------GL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~ 403 (490)
T KOG1259|consen 358 KLAQNKIET----------LS------------------------GLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLET 403 (490)
T ss_pred ehhhhhHhh----------hh------------------------hhHhhhhheeccccccchhhHHHhcccccccHHHH
Confidence 555555431 11 2334445555555555554221 235677777788
Q ss_pred EECCCCcCCCc
Q 002376 534 LDLSSNKLSGS 544 (929)
Q Consensus 534 L~Ls~N~l~~~ 544 (929)
|.|.+|.+.+.
T Consensus 404 l~L~~NPl~~~ 414 (490)
T KOG1259|consen 404 LRLTGNPLAGS 414 (490)
T ss_pred HhhcCCCcccc
Confidence 88888877753
No 466
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.09 E-value=4.8e-11 Score=116.60 Aligned_cols=130 Identities=32% Similarity=0.434 Sum_probs=45.7
Q ss_pred CCCCCCCCCEEEeecCCCCCCCCcCCC-CCCCCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhccCC
Q 002376 90 HIGNLSFLRSIQLQNNKLSGNLPREIG-NLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLR 168 (929)
Q Consensus 90 ~l~~L~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~ 168 (929)
.+.+...+++|+|++|.|+. + +.++ .+.+|+.||||+|.|+.. + .+..+++|++|+|++|+|+ .+.+.....++
T Consensus 14 ~~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~l-~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp 88 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITKL-E-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLP 88 (175)
T ss_dssp ------------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-T
T ss_pred cccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCccc-c-CccChhhhhhcccCCCCCC-ccccchHHhCC
Confidence 34556678999999999873 3 3455 578899999999999843 3 4778899999999999998 56654234688
Q ss_pred CCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccC---CccccCCCCceEEe
Q 002376 169 SLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVP---STIYNMTSLVHLRL 231 (929)
Q Consensus 169 ~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L 231 (929)
+|+.|+|++|++.. +..+ ..++.+++|++|+|.+|.++...- ..+..+++|+.||-
T Consensus 89 ~L~~L~L~~N~I~~-----l~~l--~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 89 NLQELYLSNNKISD-----LNEL--EPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp T--EEE-TTS---S-----CCCC--GGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred cCCEEECcCCcCCC-----hHHh--HHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 99999999998743 2221 234567777777777777763211 13445666666553
No 467
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.06 E-value=2.5e-11 Score=138.46 Aligned_cols=213 Identities=32% Similarity=0.363 Sum_probs=136.4
Q ss_pred cccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceeccc
Q 002376 354 ELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLS 433 (929)
Q Consensus 354 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 433 (929)
+|..|++.+|+|... ...+..+++|++|+|++|+|+... .+..++.|+.|++++|.|+.. ..+..++.|+.++++
T Consensus 96 ~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~ 170 (414)
T KOG0531|consen 96 SLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLS 170 (414)
T ss_pred ceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchhhheeccCcchhc--cCCccchhhhcccCC
Confidence 455555555555432 222556677777777777776443 244556677777777777632 344557778888888
Q ss_pred CcccccccC-cccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCc--Cccee
Q 002376 434 GNELTGEIP-ISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCK--SLEEL 510 (929)
Q Consensus 434 ~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~--~L~~L 510 (929)
+|++....+ . ...+.+++.+++.+|.+.- ...+..+..+..+++..|.++-.-+ +..+. .|+.+
T Consensus 171 ~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~----------i~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l 237 (414)
T KOG0531|consen 171 YNRIVDIENDE-LSELISLEELDLGGNSIRE----------IEGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLREL 237 (414)
T ss_pred cchhhhhhhhh-hhhccchHHHhccCCchhc----------ccchHHHHHHHHhhcccccceeccC--cccchhHHHHHH
Confidence 888875444 2 4667788888888888752 2334445556666888888763322 11222 38899
Q ss_pred ecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccC---CC--CCCCCCCCcccccC
Q 002376 511 LMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVV---PS--EGIFRNMSNVHLKG 585 (929)
Q Consensus 511 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~---p~--~~~~~~l~~l~l~~ 585 (929)
++++|.+. .++..+..+..+..||+++|++... ..+.....+..+.+..|.+...- .. .....++..+.+.+
T Consensus 238 ~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (414)
T KOG0531|consen 238 YLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLEL 314 (414)
T ss_pred hcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhcccccccccccccccccc
Confidence 99999987 3435677788899999999998754 23555667777888888876321 11 23345666677777
Q ss_pred CC
Q 002376 586 NP 587 (929)
Q Consensus 586 N~ 587 (929)
||
T Consensus 315 ~~ 316 (414)
T KOG0531|consen 315 NP 316 (414)
T ss_pred Cc
Confidence 76
No 468
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.05 E-value=2.3e-11 Score=138.70 Aligned_cols=248 Identities=27% Similarity=0.368 Sum_probs=142.3
Q ss_pred CCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhccCCCCc
Q 002376 92 GNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQ 171 (929)
Q Consensus 92 ~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~ 171 (929)
..+..++.+++..|.+. .+-..+..+++|+.|++.+|+|.. +...+..+++|++|||++|+|+ .+.. +..++.|+
T Consensus 69 ~~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~-~i~~--l~~l~~L~ 143 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKIT-KLEG--LSTLTLLK 143 (414)
T ss_pred HHhHhHHhhccchhhhh-hhhcccccccceeeeeccccchhh-cccchhhhhcchheeccccccc-cccc--hhhccchh
Confidence 35566777777777776 344456777788888888888874 3333667788888888888887 3322 56666678
Q ss_pred EEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccC-CccccCCCCceEEeeecCCCCcCCcccccCCCC
Q 002376 172 VLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVP-STIYNMTSLVHLRLASNQLGGEIPYDVRDTLPN 250 (929)
Q Consensus 172 ~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~ 250 (929)
.|++++|.++.. ..+..+.+|+.+++++|++..+.+ . ...+.+++.+++++|.+.. +
T Consensus 144 ~L~l~~N~i~~~----------~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~-i---------- 201 (414)
T KOG0531|consen 144 ELNLSGNLISDI----------SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE-I---------- 201 (414)
T ss_pred hheeccCcchhc----------cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc-c----------
Confidence 888888876421 234457777777888887775554 2 4566777777777777651 1
Q ss_pred cceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCC--ccceeccccccccCCCCCCCCccccccCCCC
Q 002376 251 LLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLP--FLRTYNIGFNKIVSSGDDEGLSFITSLTNST 328 (929)
Q Consensus 251 L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~ 328 (929)
..+..+..+..+++..|.++..-+ +..+. +|+.+++++|.+.... ..+..+.
T Consensus 202 ----------------~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~~~~--------~~~~~~~ 255 (414)
T KOG0531|consen 202 ----------------EGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRISRSP--------EGLENLK 255 (414)
T ss_pred ----------------cchHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCcccccc--------ccccccc
Confidence 112222233333444444442211 11111 2555555555554431 1234455
Q ss_pred CCCEEEccCCccccccCchhhhccccccEEEecCCccccc---cCCC-CCCCCcccEEEeeCCCCCcccCc
Q 002376 329 HLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGK---IPAS-IGRLRSLTLLDLSYNSISGEIPI 395 (929)
Q Consensus 329 ~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~---~p~~-~~~l~~L~~L~Ls~N~l~~~~p~ 395 (929)
.+..|++.+|++...-. +.... .+..+.+..|.+... .... ....+.++...+..|.+....+.
T Consensus 256 ~l~~l~~~~n~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (414)
T KOG0531|consen 256 NLPVLDLSSNRISNLEG--LERLP-KLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISSL 323 (414)
T ss_pred cccccchhhcccccccc--ccccc-hHHHhccCcchhcchhhhhccccccccccccccccccCcccccccc
Confidence 66666666666653211 11122 455556666655421 1111 45567788888888877755443
No 469
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.99 E-value=2.5e-10 Score=111.59 Aligned_cols=79 Identities=30% Similarity=0.442 Sum_probs=25.3
Q ss_pred cccCccEEEecCCCCCCCCCcch-hcCcCcceeecccccccccCC-ccccCCCCCCEEECCCCcCCCcCCc----ccccC
Q 002376 479 RLENVVTIDLSDNSLSGNLPNSL-KNCKSLEELLMAYNQFSGPIP-NIVAELKGLEVLDLSSNKLSGSIPS----DLQNL 552 (929)
Q Consensus 479 ~l~~L~~LdLs~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l 552 (929)
.++.|++|++++|+++. ++..+ ..+++|++|+|++|+|...-. ..++.+++|++|+|.+|.++.. +. .+..+
T Consensus 62 ~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~l 139 (175)
T PF14580_consen 62 GLPRLKTLDLSNNRISS-ISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKL 139 (175)
T ss_dssp --TT--EEE--SS---S--CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-
T ss_pred ChhhhhhcccCCCCCCc-cccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHc
Confidence 34445555555555542 22222 235555555555555543211 2344556666666666665532 21 23445
Q ss_pred CCCCeEe
Q 002376 553 QALRSLN 559 (929)
Q Consensus 553 ~~L~~L~ 559 (929)
|+|+.||
T Consensus 140 P~Lk~LD 146 (175)
T PF14580_consen 140 PSLKVLD 146 (175)
T ss_dssp TT-SEET
T ss_pred ChhheeC
Confidence 6666655
No 470
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.98 E-value=7.1e-11 Score=125.49 Aligned_cols=167 Identities=23% Similarity=0.218 Sum_probs=96.5
Q ss_pred ccccccceecccccccCCCCCh-hhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCC
Q 002376 140 SKLTELKMLDLMANKITGRVTD-DQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPS 218 (929)
Q Consensus 140 ~~l~~L~~L~Ls~N~l~~~i~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 218 (929)
+++.+|++..|.+.... ..+. .....|++++.||||+|-|+..-| +..-...|++|+.|+|+.|++.....+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~------v~~i~eqLp~Le~LNls~Nrl~~~~~s 190 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFP------VLKIAEQLPSLENLNLSSNRLSNFISS 190 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHH------HHHHHHhcccchhcccccccccCCccc
Confidence 34556666666666554 2221 345566666666666665543211 111234566666666666666533222
Q ss_pred cc-ccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCc-cCCCCCC
Q 002376 219 TI-YNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTL-PPGLGNL 296 (929)
Q Consensus 219 ~~-~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l 296 (929)
.. ..++.|+.|.|++|.|+..--..+....|+|+.|+|..|...+....+...+..|+.|||++|++-... -...+.+
T Consensus 191 ~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l 270 (505)
T KOG3207|consen 191 NTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTL 270 (505)
T ss_pred cchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccc
Confidence 11 145667777777777763211223334677777777777544444455566778888888888876322 1456777
Q ss_pred CccceeccccccccCCC
Q 002376 297 PFLRTYNIGFNKIVSSG 313 (929)
Q Consensus 297 ~~L~~L~L~~N~i~~~~ 313 (929)
+.|+.|+++.+.|.++.
T Consensus 271 ~~L~~Lnls~tgi~si~ 287 (505)
T KOG3207|consen 271 PGLNQLNLSSTGIASIA 287 (505)
T ss_pred cchhhhhccccCcchhc
Confidence 78888888777776653
No 471
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.97 E-value=7.9e-12 Score=129.31 Aligned_cols=265 Identities=25% Similarity=0.324 Sum_probs=122.0
Q ss_pred CCCCCCCCcEEeCCCCCCCCC----cccccccccccceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCcccc
Q 002376 114 EIGNLFRLRVLNISFNNLQGE----LPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIA 189 (929)
Q Consensus 114 ~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~ 189 (929)
.+..+..++.|+||+|.|... +-..+.+.++|+..++|+ -++|..-. .+|..+.
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd-~ftGR~~~---------------------Ei~e~L~ 82 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSD-MFTGRLKD---------------------EIPEALK 82 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHh-hhcCCcHH---------------------HHHHHHH
Confidence 344556677777777766533 223344555666666553 23333221 1222221
Q ss_pred ccCCCccCCCCcccEEEeecccCCCccCCc----cccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCC
Q 002376 190 NLIPSDLSRLENLKVLDLTINRLAGTVPST----IYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKI 265 (929)
Q Consensus 190 ~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~ 265 (929)
. +...+.+.++|++||||.|-+.-..+.. +..++.|++|+|.+|.+.-.--..+...+. .+. .|+.
T Consensus 83 ~-l~~aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~---~l~--~~kk---- 152 (382)
T KOG1909|consen 83 M-LSKALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALF---ELA--VNKK---- 152 (382)
T ss_pred H-HHHHHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHH---HHH--HHhc----
Confidence 1 2223444556777777777665443333 345778888888888775111111111111 111 1111
Q ss_pred CCcccccccccEEeccCccCcCC----ccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccc
Q 002376 266 PGSLHNLTNIQIIRMTHNLLEGT----LPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFE 341 (929)
Q Consensus 266 p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 341 (929)
...-..|+++...+|++... +...|...+.|+.+.+..|.|..-+.. .....+..+++|+.|||.+|-|+
T Consensus 153 ---~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~---al~eal~~~~~LevLdl~DNtft 226 (382)
T KOG1909|consen 153 ---AASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVT---ALAEALEHCPHLEVLDLRDNTFT 226 (382)
T ss_pred ---cCCCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhH---HHHHHHHhCCcceeeecccchhh
Confidence 12234566666666666532 112334444455555555544322210 01123344444444444444443
Q ss_pred cccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccc-----cCCCCCCEEEecCCcCCCC
Q 002376 342 GKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEI-----GQLQGLQVLGLAGNEIPGG 416 (929)
Q Consensus 342 ~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~ 416 (929)
..-.. .+...+..+++|+.|+++++.++..-...| ...++|++|.|.+|.|+..
T Consensus 227 ~egs~---------------------~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~d 285 (382)
T KOG1909|consen 227 LEGSV---------------------ALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRD 285 (382)
T ss_pred hHHHH---------------------HHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHH
Confidence 21111 122344555667777777776654332222 1245556666666655421
Q ss_pred ----CcccccCCCCCceecccCccc
Q 002376 417 ----IPNSLANLKKLNQIDLSGNEL 437 (929)
Q Consensus 417 ----~p~~~~~l~~L~~L~Ls~N~l 437 (929)
+.......+.|..|+|++|++
T Consensus 286 a~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 286 AALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHHHHHHHhcchhhHHhcCCcccc
Confidence 122233344555555555555
No 472
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.96 E-value=7.5e-10 Score=126.09 Aligned_cols=98 Identities=19% Similarity=0.207 Sum_probs=66.6
Q ss_pred HHHHHHHHHccC----CccccceeeecccCCCCCcceEEEEEEecCCCCcccccccc------ccccccHHH-HHHHhhh
Q 002376 689 FIAECETLRNVR----HRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE------RKNELDITS-ALDYLHN 757 (929)
Q Consensus 689 ~~~E~~~l~~l~----Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~------~~~~~~ia~-aL~yLH~ 757 (929)
|.+|++.+.+++ |.+-|.+-.+|.+.. ...++||||++|+++.++.... ...+..++. .+..+|.
T Consensus 200 f~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~----~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 200 LRREAANASELGENFKNDPGVYVPEVYWDRT----SERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEeCCEehhhc----CCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHh
Confidence 445666555552 333333333332211 1258999999999999876421 122333444 4667787
Q ss_pred CCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 758 DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 758 ~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
. +++|+|+||.||++++++.+++.|||+++.+.
T Consensus 276 ~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 276 D---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred C---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 6 99999999999999999999999999998764
No 473
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=98.96 E-value=1.1e-09 Score=108.94 Aligned_cols=118 Identities=21% Similarity=0.178 Sum_probs=85.6
Q ss_pred ceeecccCceeEEeccccC-------------cHHHHHHHHHHHHccCCccccc-eeeecccCCCCCcceEEEEEEecCC
Q 002376 666 ENLIGSGSFGSVLHNERTG-------------SWKSFIAECETLRNVRHRNLVK-LITSCSSLDSKNMEFLALVYEFLSN 731 (929)
Q Consensus 666 ~~~iG~G~~g~Vy~~~~~~-------------~~~~~~~E~~~l~~l~Hpniv~-l~~~~~~~~~~~~~~~~lV~e~~~~ 731 (929)
.+.++.|.++.||+++..+ ....+.+|+++++.+.+.++++ ++.+.. + ..++||||+++
T Consensus 3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~-----~~~lv~e~i~G 75 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDP--E-----TGVLITEFIEG 75 (170)
T ss_pred eeecCCcccCceEEEEECCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeC--C-----CCeEEEEecCC
Confidence 3567888888888765431 1234678999999987666554 444321 1 13799999999
Q ss_pred CCccccccccccccccHHHHHHHhhhCC--CCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 732 GSLGDWIHGERKNELDITSALDYLHNDC--EVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 732 gsL~~~l~~~~~~~~~ia~aL~yLH~~~--~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
.++.+.-...+....+++++++.||+.. ...++|+|++|.||+++ ++.+++.|||.+..
T Consensus 76 ~~l~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 76 SELLTEDFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred CccccccccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 9887642223344678999999999873 22369999999999999 66899999999864
No 474
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.91 E-value=1.2e-09 Score=80.38 Aligned_cols=40 Identities=53% Similarity=1.184 Sum_probs=31.3
Q ss_pred hhhHHHHHHHHhhcCCCCCCCCCCCCCCC--CCCCCCcceeeC
Q 002376 27 NTDKEALMSFKSQISQESPSSPLSYWNPS--SSPCTWPGVICN 67 (929)
Q Consensus 27 ~~~~~aLl~~k~~~~~~~~~~~l~~w~~~--~~~c~w~gv~c~ 67 (929)
++|++||++||+++..+ |.+.+++|+.+ .+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~-~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNND-PSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-S-C-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccc-cCcccccCCCcCCCCCeeeccEEeC
Confidence 68999999999999865 67999999987 799999999996
No 475
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.91 E-value=8.7e-11 Score=121.72 Aligned_cols=231 Identities=21% Similarity=0.313 Sum_probs=130.1
Q ss_pred cCCCCCCCCCCCEEEeecCCCCC----CCCcCCCCCCCCcEEeCCCC---CCCCCccccc-------ccccccceecccc
Q 002376 87 ISPHIGNLSFLRSIQLQNNKLSG----NLPREIGNLFRLRVLNISFN---NLQGELPVNI-------SKLTELKMLDLMA 152 (929)
Q Consensus 87 i~~~l~~L~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~Ls~ 152 (929)
+-+.+..+..++.|+||+|.+.. .+-..+.+.++|+.-++|+- ++...+|+.+ -..++|++||||+
T Consensus 22 v~~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSD 101 (382)
T KOG1909|consen 22 VEEELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSD 101 (382)
T ss_pred HHHHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccc
Confidence 33556678899999999999963 35566788889999999864 3334556543 3456788888888
Q ss_pred cccCCCCCh---hhhccCCCCcEEEccccccCCCCCccccc----c-CCCccCCCCcccEEEeecccCCCcc----CCcc
Q 002376 153 NKITGRVTD---DQLRNLRSLQVLNFGKNLLWGSIPPSIAN----L-IPSDLSRLENLKVLDLTINRLAGTV----PSTI 220 (929)
Q Consensus 153 N~l~~~i~~---~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~----l-~p~~~~~l~~L~~L~Ls~N~l~~~~----p~~~ 220 (929)
|.|.-.-+. +.+.++.+|+.|.|.+|-+.-.--..++. + ...-...-++|+++...+|++.... ...|
T Consensus 102 NA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~ 181 (382)
T KOG1909|consen 102 NAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAF 181 (382)
T ss_pred cccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHH
Confidence 887522221 23456777888888877552100001100 0 1111223345666666666654321 2234
Q ss_pred ccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCC----ccCCCCCC
Q 002376 221 YNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGT----LPPGLGNL 296 (929)
Q Consensus 221 ~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l 296 (929)
...+.|+.+.++.|.|. |..+ ..+-..|..+++|++|||.+|-|+.. +...+..+
T Consensus 182 ~~~~~leevr~~qN~I~---~eG~------------------~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~ 240 (382)
T KOG1909|consen 182 QSHPTLEEVRLSQNGIR---PEGV------------------TALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSW 240 (382)
T ss_pred HhccccceEEEeccccc---Cchh------------------HHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhccc
Confidence 44455555555555543 1111 01223466777888888888877632 33456666
Q ss_pred CccceeccccccccCCCCCCCCccccccC-CCCCCCEEEccCCccc
Q 002376 297 PFLRTYNIGFNKIVSSGDDEGLSFITSLT-NSTHLNYLALDGNQFE 341 (929)
Q Consensus 297 ~~L~~L~L~~N~i~~~~~~~~~~~~~~~~-~l~~L~~L~Ls~N~l~ 341 (929)
++|+.++++++.+..-+... +...+. ..+.|++|.|.+|.++
T Consensus 241 ~~L~El~l~dcll~~~Ga~a---~~~al~~~~p~L~vl~l~gNeIt 283 (382)
T KOG1909|consen 241 PHLRELNLGDCLLENEGAIA---FVDALKESAPSLEVLELAGNEIT 283 (382)
T ss_pred chheeecccccccccccHHH---HHHHHhccCCCCceeccCcchhH
Confidence 67777777777765544321 111121 1345555555555554
No 476
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.79 E-value=1.1e-08 Score=124.54 Aligned_cols=148 Identities=30% Similarity=0.341 Sum_probs=105.8
Q ss_pred EEEEEcCCCCCccccCCCCCCCCCCCEEEeecCC--CCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecc
Q 002376 73 VIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNK--LSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDL 150 (929)
Q Consensus 73 v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~--l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 150 (929)
|....+.++.+. .++.+.. .+.|++|-+..|. +....++.|..++.|++||||+|.=-+.+|.++++|-+|++|+|
T Consensus 525 ~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L 602 (889)
T KOG4658|consen 525 VRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDL 602 (889)
T ss_pred eeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccc
Confidence 444444455443 2332222 2379999999996 55344455788999999999998777799999999999999999
Q ss_pred cccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccC--CCccCCccccCCCCce
Q 002376 151 MANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRL--AGTVPSTIYNMTSLVH 228 (929)
Q Consensus 151 s~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l--~~~~p~~~~~l~~L~~ 228 (929)
++..++ .+|.. +++|+.|.+||+..+.--.. +|.....+++|++|.|-.... ....-..+.++..|+.
T Consensus 603 ~~t~I~-~LP~~-l~~Lk~L~~Lnl~~~~~l~~--------~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ 672 (889)
T KOG4658|consen 603 SDTGIS-HLPSG-LGNLKKLIYLNLEVTGRLES--------IPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLEN 672 (889)
T ss_pred cCCCcc-ccchH-HHHHHhhheecccccccccc--------ccchhhhcccccEEEeeccccccchhhHHhhhcccchhh
Confidence 999998 78888 99999999999998853222 245566799999999876652 2233334455555555
Q ss_pred EEee
Q 002376 229 LRLA 232 (929)
Q Consensus 229 L~Ls 232 (929)
+...
T Consensus 673 ls~~ 676 (889)
T KOG4658|consen 673 LSIT 676 (889)
T ss_pred heee
Confidence 5553
No 477
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.77 E-value=4.5e-09 Score=84.45 Aligned_cols=59 Identities=36% Similarity=0.527 Sum_probs=31.7
Q ss_pred CccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCc
Q 002376 482 NVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNK 540 (929)
Q Consensus 482 ~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 540 (929)
+|++|++++|+++...+..|.++++|++|++++|+++...|..|..+++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34555555555554444455555555555555555555555555555555555555554
No 478
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.72 E-value=1.6e-08 Score=81.17 Aligned_cols=60 Identities=32% Similarity=0.434 Sum_probs=37.9
Q ss_pred cccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcC
Q 002376 354 ELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEI 413 (929)
Q Consensus 354 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 413 (929)
+|++|++++|+|+...+.+|.++++|++|++++|+++...|..|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 456666666666655556666666666666666666655555666666666666666653
No 479
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.67 E-value=1.8e-08 Score=116.00 Aligned_cols=73 Identities=18% Similarity=0.221 Sum_probs=49.6
Q ss_pred EEEEEEecCCCCccccc--cccccccccHHH--HHHHhhhCCCCCEEecCCCCCCeeecCCC----ceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWI--HGERKNELDITS--ALDYLHNDCEVPVVHSDLKPGNILLDEEM----TAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l--~~~~~~~~~ia~--aL~yLH~~~~~~iiHrDlk~~NILl~~~~----~~ki~DfGla~~~~ 793 (929)
.++||||++|+.+.++- .........+++ +-.|+++....+++|+|+||.||+++.++ .+++.|||++..+.
T Consensus 236 ~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 236 TVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred ceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 58999999999998742 222111111221 11222222223999999999999999888 99999999998764
Q ss_pred c
Q 002376 794 E 794 (929)
Q Consensus 794 ~ 794 (929)
+
T Consensus 316 ~ 316 (537)
T PRK04750 316 K 316 (537)
T ss_pred H
Confidence 3
No 480
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.67 E-value=8.8e-10 Score=123.49 Aligned_cols=110 Identities=25% Similarity=0.376 Sum_probs=47.3
Q ss_pred hhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCC
Q 002376 476 EISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQAL 555 (929)
Q Consensus 476 ~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 555 (929)
.+.-++.++.||||+|+++... .+..|..|+.|||++|.+...+--....+. |+.|.|++|.++.. ..+.+|.+|
T Consensus 182 SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL--~gie~LksL 256 (1096)
T KOG1859|consen 182 SLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTL--RGIENLKSL 256 (1096)
T ss_pred HHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhh--hhHHhhhhh
Confidence 3333444444455555444321 344445555555555555422222222222 55555555554421 234445555
Q ss_pred CeEeCCCCcCcccCCCC--CCCCCCCcccccCCCCCc
Q 002376 556 RSLNLTFNNLEGVVPSE--GIFRNMSNVHLKGNPKLC 590 (929)
Q Consensus 556 ~~L~Ls~N~l~~~~p~~--~~~~~l~~l~l~~N~~~c 590 (929)
+.|||++|-|++.-.-. ..+..+..+++.|||.-|
T Consensus 257 ~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 257 YGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred hccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 55555555554432111 123334445555555433
No 481
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.64 E-value=1.1e-08 Score=114.63 Aligned_cols=167 Identities=26% Similarity=0.274 Sum_probs=117.9
Q ss_pred CCCceeecc--cCceeEEeccc--cCc------------------HHHHHHHHHHHHccC-CccccceeeecccCCCCCc
Q 002376 663 FSHENLIGS--GSFGSVLHNER--TGS------------------WKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 663 ~~~~~~iG~--G~~g~Vy~~~~--~~~------------------~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~ 719 (929)
|.....+|. |.+|.||++.. ..+ ...=.+|...-.+++ |+|.|+.+..+.+ .
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~-----~ 190 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG-----S 190 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccccc-----C
Confidence 344567899 99999999887 311 112235666566664 9999997776643 3
Q ss_pred ceEEEEEEecCCCCcccccccccc---------ccccHHH----HHHHhhhCCCCCEEecCCCCCCeeecCC-CceEEec
Q 002376 720 EFLALVYEFLSNGSLGDWIHGERK---------NELDITS----ALDYLHNDCEVPVVHSDLKPGNILLDEE-MTAKVGD 785 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~~---------~~~~ia~----aL~yLH~~~~~~iiHrDlk~~NILl~~~-~~~ki~D 785 (929)
+..++-+|++. .++.++.+..-. ...+..+ |+.++|+. +++|-|+||.||....+ ..++..|
T Consensus 191 ~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~d 266 (524)
T KOG0601|consen 191 GILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTD 266 (524)
T ss_pred Ccceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCC
Confidence 44788889884 688777653221 1334455 99999998 89999999999999988 8999999
Q ss_pred cccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCC
Q 002376 786 FGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGE 840 (929)
Q Consensus 786 fGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~ 840 (929)
||+...+........... .....|...|++||... +.++.++|++++|.+..+
T Consensus 267 f~~v~~i~~~~~~~~~~~-~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~ 319 (524)
T KOG0601|consen 267 FGLVSKISDGNFSSVFKV-SKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILE 319 (524)
T ss_pred cceeEEccCCccccceee-eecCCCCceEeChhhhc-cccchHhhhcchhhhhHh
Confidence 999987754322211111 12225777899999874 578999999999966544
No 482
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.59 E-value=8.9e-08 Score=92.00 Aligned_cols=96 Identities=25% Similarity=0.296 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEecCCCCccccccccc-cccccHHHHHHHhhhCCCCCEEe
Q 002376 687 KSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER-KNELDITSALDYLHNDCEVPVVH 765 (929)
Q Consensus 687 ~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~ia~aL~yLH~~~~~~iiH 765 (929)
++-.+|++++++++--.|..-.=+..+.+ ...+||||++|..|.+.+...+ .....|-.-+.-||.. +|+|
T Consensus 44 ~Rt~~Earil~~a~~~GV~~P~v~dvD~~-----~~~I~me~I~G~~lkd~l~~~~~~~~r~vG~~vg~lH~~---givH 115 (204)
T COG3642 44 ERTRREARILAKAREAGVPVPIVYDVDPD-----NGLIVMEYIEGELLKDALEEARPDLLREVGRLVGKLHKA---GIVH 115 (204)
T ss_pred HHHHHHHHHHHHHHHcCCCCCeEEEEcCC-----CCEEEEEEeCChhHHHHHHhcchHHHHHHHHHHHHHHhc---Ceec
Confidence 45668999999886443322222222222 1479999999988988887552 3355666778889998 9999
Q ss_pred cCCCCCCeeecCCCceEEeccccccc
Q 002376 766 SDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 766 rDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
+|+.++||.+..+. +.+.|||++..
T Consensus 116 GDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 116 GDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CCCccceEEEeCCc-EEEEECCcccc
Confidence 99999999998764 99999999874
No 483
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.57 E-value=9.4e-10 Score=123.26 Aligned_cols=127 Identities=29% Similarity=0.303 Sum_probs=95.9
Q ss_pred cccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccc
Q 002376 274 NIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSN 353 (929)
Q Consensus 274 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 353 (929)
.|...+.++|.+. .+..++.-++.|+.|||++|+++.. ..+..+++|++|||++|.+. .+|..-....
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v---------~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc- 232 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV---------DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGC- 232 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh---------HHHHhcccccccccccchhc-cccccchhhh-
Confidence 5777888888887 6677788888889999999988765 35677889999999999988 5665332223
Q ss_pred cccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccC-ccccCCCCCCEEEecCCcCC
Q 002376 354 ELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIP-IEIGQLQGLQVLGLAGNEIP 414 (929)
Q Consensus 354 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~ 414 (929)
.|..|.+++|.++.. ..+.++++|+.|||++|-|++.-- ..++.|..|+.|+|.+|.+-
T Consensus 233 ~L~~L~lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 233 KLQLLNLRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred hheeeeecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 588999999988744 356788999999999998875321 22456677888888888774
No 484
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.56 E-value=7.9e-08 Score=117.20 Aligned_cols=128 Identities=24% Similarity=0.276 Sum_probs=82.0
Q ss_pred CcccEEEeecccCCCccCCccccCCCCceEEeeecC--CCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccE
Q 002376 200 ENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQ--LGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQI 277 (929)
Q Consensus 200 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~--l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~ 277 (929)
...+...+-+|.+.. ++.... .++|++|-+..|. +. .++..++..+|.|.+|+|++|.--+.+|..++++-+|++
T Consensus 523 ~~~rr~s~~~~~~~~-~~~~~~-~~~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIEH-IAGSSE-NPKLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred hheeEEEEeccchhh-ccCCCC-CCccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 456666677776652 233222 2367777777775 33 566676777777777777777766777777777777777
Q ss_pred EeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCC
Q 002376 278 IRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGN 338 (929)
Q Consensus 278 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N 338 (929)
|+|++..++ .+|..+++|..|.+||+.++.-.... +.....+++|++|.+..-
T Consensus 600 L~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~-------~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 600 LDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESI-------PGILLELQSLRVLRLPRS 652 (889)
T ss_pred ccccCCCcc-ccchHHHHHHhhheeccccccccccc-------cchhhhcccccEEEeecc
Confidence 777777777 67777777777777777665532221 122333566666655443
No 485
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.52 E-value=4.7e-08 Score=109.64 Aligned_cols=226 Identities=19% Similarity=0.090 Sum_probs=139.4
Q ss_pred HHhhCCCCCceeecccCceeEEecccc-------------C------cHHHHHHHHHHHHcc-CCccccceeeecccCCC
Q 002376 657 RRATGNFSHENLIGSGSFGSVLHNERT-------------G------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDS 716 (929)
Q Consensus 657 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~-------------~------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~ 716 (929)
...+.+|.....||.|.|+.|++.... . +...-..|+.+...+ .|.++++....+.....
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc
Confidence 344568888999999999999874422 0 011122455555555 48888887776654332
Q ss_pred CCcceEEEEEEecCCCCcccccc------c--cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC-CceEEeccc
Q 002376 717 KNMEFLALVYEFLSNGSLGDWIH------G--ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE-MTAKVGDFG 787 (929)
Q Consensus 717 ~~~~~~~lV~e~~~~gsL~~~l~------~--~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~-~~~ki~DfG 787 (929)
.|+--|||++++...... . ......+++.|+.++|+. .++|+|+||+||++..+ +..++.|||
T Consensus 341 -----~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~ 412 (524)
T KOG0601|consen 341 -----GYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFG 412 (524)
T ss_pred -----ccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccc
Confidence 578899999998765442 1 123356888999999976 89999999999999886 789999999
Q ss_pred cccccccccCCCCCccccceeccccccc--cccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHH
Q 002376 788 LARFLLERVDNQSSISSTHVFMGSIGYV--PPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQ 865 (929)
Q Consensus 788 la~~~~~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 865 (929)
++..+.-. .....++-+|+ +|+......+..++|++++|....+..+.......... +.. +......
T Consensus 413 ~~t~~~~~---------~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~-~~~-i~~~~~p 481 (524)
T KOG0601|consen 413 CWTRLAFS---------SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ-SLT-IRSGDTP 481 (524)
T ss_pred ccccccee---------cccccccccccccchhhccccccccccccccccccccccccCcccCccccc-cee-eeccccc
Confidence 98643211 11122334455 56666667789999999999665553332221111110 000 0000000
Q ss_pred hhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 866 LMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
.. . +.....+.+......+++..||.+.+.....+-
T Consensus 482 ~~---~--------~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 482 NL---P--------GLKLQLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred CC---C--------chHHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence 00 0 000112225567888999999998877655443
No 486
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.48 E-value=3.1e-07 Score=87.73 Aligned_cols=118 Identities=24% Similarity=0.296 Sum_probs=83.3
Q ss_pred CceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 665 HENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 665 ~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
....|-+|+=+.|+++.+.+ ..++..+|++.+.+++--.|.--.=++.+... -
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~-----~ 85 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYG-----G 85 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCC-----C
Confidence 35678889988888877652 13467789999998864333222222322222 3
Q ss_pred EEEEEecCC-CCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC---ceEEecccc
Q 002376 723 ALVYEFLSN-GSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM---TAKVGDFGL 788 (929)
Q Consensus 723 ~lV~e~~~~-gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~---~~ki~DfGl 788 (929)
.++|||+++ .++.+++.... ..+..|-+.+.-||.. .|||+|+.++||++..++ .+.+.|||+
T Consensus 86 ~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgl 162 (229)
T KOG3087|consen 86 QIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGL 162 (229)
T ss_pred eEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecc
Confidence 799999976 36777765221 2245677889999998 899999999999997665 458999999
Q ss_pred cc
Q 002376 789 AR 790 (929)
Q Consensus 789 a~ 790 (929)
+.
T Consensus 163 s~ 164 (229)
T KOG3087|consen 163 SS 164 (229)
T ss_pred hh
Confidence 85
No 487
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.39 E-value=6.1e-08 Score=114.06 Aligned_cols=231 Identities=23% Similarity=0.198 Sum_probs=141.1
Q ss_pred hhCCCCCceeecccCceeEEeccccCcH-------------------HHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTGSW-------------------KSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-------------------~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
..+++...+-+-+|+++.++-++-.+.. +...++-.+.-..+||.+++...-+....
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rs---- 877 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRS---- 877 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCC----
Confidence 4456666777888999998866544221 11112222222234566665544422222
Q ss_pred ceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
-.++|++|..+|+|...++... .....+..+.+|||.. .++|||+||.|.++..++..+++|||....
T Consensus 878 -P~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~ 953 (1205)
T KOG0606|consen 878 -PLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSK 953 (1205)
T ss_pred -CcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccccccc
Confidence 2699999999999999887433 2345677899999997 699999999999999999999999984432
Q ss_pred ccc---ccCC----------------------CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHH
Q 002376 792 LLE---RVDN----------------------QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846 (929)
Q Consensus 792 ~~~---~~~~----------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~ 846 (929)
..- .... ...........||+.|.|||...+......+|.|+.|+.+++..+..-
T Consensus 954 vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~p 1033 (1205)
T KOG0606|consen 954 VGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIP 1033 (1205)
T ss_pred cccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCC
Confidence 210 0000 000112345679999999999999999999999999988877554433
Q ss_pred hhhcCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHH
Q 002376 847 VESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIR 904 (929)
Q Consensus 847 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ 904 (929)
.+... ...++++..+... ...+.....+..-+++++.+-+..+|.+|-.|.
T Consensus 1034 p~na~--tpq~~f~ni~~~~-----~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1034 PFNAE--TPQQIFENILNRD-----IPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCCc--chhhhhhccccCC-----CCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 22211 1122222111111 111111112222333455577778888887655
No 488
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.30 E-value=2.3e-06 Score=97.14 Aligned_cols=115 Identities=23% Similarity=0.326 Sum_probs=89.1
Q ss_pred ecccCceeEEeccccCc--HHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEecCCCCcccccccccc---
Q 002376 669 IGSGSFGSVLHNERTGS--WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK--- 743 (929)
Q Consensus 669 iG~G~~g~Vy~~~~~~~--~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~--- 743 (929)
-..|++-.||..+.... .....+.++.++.++||||++++..+.. .+..|+|+|-+. -|..++++...
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~-----~~~~ylvTErV~--Pl~~~lk~l~~~~v 106 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEE-----EGTLYLVTERVR--PLETVLKELGKEEV 106 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcc-----cCceEEEeeccc--cHHHHHHHhHHHHH
Confidence 34466667766555544 4556788889999999999999998744 335899999874 45555543322
Q ss_pred --ccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 744 --NELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 744 --~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
...||+.||.|||+.+ +++|++|.-..|.+++.|.-||++|-.+...
T Consensus 107 ~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~ 155 (690)
T KOG1243|consen 107 CLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKA 155 (690)
T ss_pred HHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEecc
Confidence 2578999999999875 8999999999999999999999999987643
No 489
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.28 E-value=1.9e-06 Score=89.49 Aligned_cols=123 Identities=21% Similarity=0.252 Sum_probs=86.0
Q ss_pred eeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCc--cccceeeecccCCCCCcceEEEEEEe
Q 002376 667 NLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHR--NLVKLITSCSSLDSKNMEFLALVYEF 728 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hp--niv~l~~~~~~~~~~~~~~~~lV~e~ 728 (929)
+.||.|..+.||+++... ...++.+|+++++.+++. .+.+++.+..... ..+..++||||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~--~~~~~~~v~e~ 81 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS--VLGTPFYVMER 81 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC--ccCCceEEEEE
Confidence 567888888888754321 235688999999999763 4566777764322 11235899999
Q ss_pred cCCCCcccccc-------ccccccccHHHHHHHhhhC-------------------------------------------
Q 002376 729 LSNGSLGDWIH-------GERKNELDITSALDYLHND------------------------------------------- 758 (929)
Q Consensus 729 ~~~gsL~~~l~-------~~~~~~~~ia~aL~yLH~~------------------------------------------- 758 (929)
++++++.+.+. ....++.++++++.+||+.
T Consensus 82 i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (223)
T cd05154 82 VDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLL 161 (223)
T ss_pred eCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHH
Confidence 99998877652 1112345666667666642
Q ss_pred ----------CCCCEEecCCCCCCeeecC--CCceEEeccccccc
Q 002376 759 ----------CEVPVVHSDLKPGNILLDE--EMTAKVGDFGLARF 791 (929)
Q Consensus 759 ----------~~~~iiHrDlk~~NILl~~--~~~~ki~DfGla~~ 791 (929)
....++|+|++|.||++++ ++.+.|.||+.+..
T Consensus 162 ~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 162 RWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 1246899999999999998 66789999998874
No 490
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.26 E-value=1.4e-06 Score=87.22 Aligned_cols=90 Identities=17% Similarity=0.178 Sum_probs=64.4
Q ss_pred HHHHHHHHccCC--ccccceeeecccCCCCCcceEEEEEEecCCCCccc-cccc-------cccccccHHHHHHHh-hhC
Q 002376 690 IAECETLRNVRH--RNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGD-WIHG-------ERKNELDITSALDYL-HND 758 (929)
Q Consensus 690 ~~E~~~l~~l~H--pniv~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~-~l~~-------~~~~~~~ia~aL~yL-H~~ 758 (929)
.+|.+.|+++.. -++.+.+++. + -++||||+.++.+.. .+++ ......+++.+|.++ |..
T Consensus 74 ~kE~r~L~rl~~~Gv~vP~pi~~~-----~----~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~ 144 (197)
T cd05146 74 EKEMHNLKRMQKAGIPCPEVVVLK-----K----HVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKEC 144 (197)
T ss_pred HHHHHHHHHHHHcCCCCCeEEEec-----C----CEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhC
Confidence 389999999853 3555666542 1 489999997643321 1211 112346788999988 666
Q ss_pred CCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 759 CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 759 ~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
++||+|+++.||++++ +.+.++|||.|-..
T Consensus 145 ---glVHGDLs~~NIL~~~-~~v~iIDF~qav~~ 174 (197)
T cd05146 145 ---NLVHADLSEYNMLWHD-GKVWFIDVSQSVEP 174 (197)
T ss_pred ---CeecCCCCHHHEEEEC-CcEEEEECCCceeC
Confidence 9999999999999974 68999999988643
No 491
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.24 E-value=1e-07 Score=96.72 Aligned_cols=45 Identities=27% Similarity=0.328 Sum_probs=24.9
Q ss_pred CCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCcccc
Q 002376 292 GLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEG 342 (929)
Q Consensus 292 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 342 (929)
.+..++++..|+|+.|+|.+. ..+.++..+++|..|.+++|.+..
T Consensus 219 ~se~~p~~~~LnL~~~~idsw------asvD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 219 GSEPFPSLSCLNLGANNIDSW------ASVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred cCCCCCcchhhhhcccccccH------HHHHHHcCCchhheeeccCCcccc
Confidence 344455555666666665432 223455566666666666666653
No 492
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.10 E-value=3.4e-07 Score=82.73 Aligned_cols=104 Identities=27% Similarity=0.338 Sum_probs=47.2
Q ss_pred cccEEEecCCccccccCCC---CCCCCcccEEEeeCCCCCcccCccccC-CCCCCEEEecCCcCCCCCcccccCCCCCce
Q 002376 354 ELSKLYLGGNHIYGKIPAS---IGRLRSLTLLDLSYNSISGEIPIEIGQ-LQGLQVLGLAGNEIPGGIPNSLANLKKLNQ 429 (929)
Q Consensus 354 ~L~~L~Ls~N~l~~~~p~~---~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 429 (929)
.+..++|++++|. -+++. +.....|+..+|++|.+. .+|..|.. .+.+++|+|++|+|+ .+|..++.++.|+.
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~ 104 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRS 104 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhh
Confidence 3555666666553 12222 223334444555555555 23333322 234455555555554 23444555555555
Q ss_pred ecccCcccccccCcccccccccceecccCCcC
Q 002376 430 IDLSGNELTGEIPISFGNFQSLLSIDLSNNRI 461 (929)
Q Consensus 430 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 461 (929)
|+++.|.+. ..|..+..+.+|-.|+..+|.+
T Consensus 105 lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~ 135 (177)
T KOG4579|consen 105 LNLRFNPLN-AEPRVIAPLIKLDMLDSPENAR 135 (177)
T ss_pred cccccCccc-cchHHHHHHHhHHHhcCCCCcc
Confidence 555555554 2333333344444444444443
No 493
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.09 E-value=7.2e-06 Score=81.78 Aligned_cols=93 Identities=22% Similarity=0.231 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHccCCc--cccceeeecccCCCCCcceEEEEEEecC--CCCcccccccc------ccccccHHHHHHHh
Q 002376 686 WKSFIAECETLRNVRHR--NLVKLITSCSSLDSKNMEFLALVYEFLS--NGSLGDWIHGE------RKNELDITSALDYL 755 (929)
Q Consensus 686 ~~~~~~E~~~l~~l~Hp--niv~l~~~~~~~~~~~~~~~~lV~e~~~--~gsL~~~l~~~------~~~~~~ia~aL~yL 755 (929)
.....+|.+.|.++..- ++.+.+++. + -++||||++ +..+..+.... .....++...+..+
T Consensus 52 ~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-----~----~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~ 122 (188)
T PF01163_consen 52 REWAKKEFRNLKRLYEAGVPVPKPYDYN-----R----NVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKM 122 (188)
T ss_dssp HHHHHHHHHHHHHCCCTT-SS--EEEEE-----T----TEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCccCCcEEEEe-----C----CEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHH
Confidence 35677899999999765 455666553 1 389999998 44443332211 12244566655554
Q ss_pred -hhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 756 -HNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 756 -H~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
|.. +|+|+|+.+.||+++++ .+.|.|||.|..
T Consensus 123 ~~~~---givHGDLs~~NIlv~~~-~~~iIDf~qav~ 155 (188)
T PF01163_consen 123 LHKA---GIVHGDLSEYNILVDDG-KVYIIDFGQAVD 155 (188)
T ss_dssp HHCT---TEEESS-STTSEEEETT-CEEE--GTTEEE
T ss_pred HHhc---CceecCCChhhEEeecc-eEEEEecCccee
Confidence 565 99999999999999988 999999998864
No 494
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.07 E-value=4.5e-06 Score=88.43 Aligned_cols=101 Identities=15% Similarity=0.113 Sum_probs=72.3
Q ss_pred HHHHHHHHHHccCCcc--ccceeeecccCCCCCcceEEEEEEecCCC-Cccccccc----------cccccccHHHHHHH
Q 002376 688 SFIAECETLRNVRHRN--LVKLITSCSSLDSKNMEFLALVYEFLSNG-SLGDWIHG----------ERKNELDITSALDY 754 (929)
Q Consensus 688 ~~~~E~~~l~~l~Hpn--iv~l~~~~~~~~~~~~~~~~lV~e~~~~g-sL~~~l~~----------~~~~~~~ia~aL~y 754 (929)
.+.+|...+.++..-. +.+.+++...........-++|||++++. +|.+++.. .+.+..+++..+.-
T Consensus 74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~ 153 (268)
T PRK15123 74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRD 153 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 4778999888885333 33444454322111123468999999876 78887642 11234578999999
Q ss_pred hhhCCCCCEEecCCCCCCeeecC-------CCceEEeccccccc
Q 002376 755 LHNDCEVPVVHSDLKPGNILLDE-------EMTAKVGDFGLARF 791 (929)
Q Consensus 755 LH~~~~~~iiHrDlk~~NILl~~-------~~~~ki~DfGla~~ 791 (929)
||.. +|+|+|++++|||++. ++.+.++||+.++.
T Consensus 154 LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 154 MHAA---GINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred HHHC---cCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 9998 9999999999999975 46899999998863
No 495
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.06 E-value=9.7e-07 Score=89.85 Aligned_cols=119 Identities=29% Similarity=0.353 Sum_probs=67.8
Q ss_pred CCCCcCCCCCCCCcEEeCCCCCCCCCcc-ccc-ccccccceecccccccCCCCCh--hhhccCCCCcEEEccccccCCCC
Q 002376 109 GNLPREIGNLFRLRVLNISFNNLQGELP-VNI-SKLTELKMLDLMANKITGRVTD--DQLRNLRSLQVLNFGKNLLWGSI 184 (929)
Q Consensus 109 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~-~~l~~L~~L~Ls~N~l~~~i~~--~~~~~l~~L~~L~Ls~N~l~~~~ 184 (929)
|..+-.+..+.-++.|-+.+..|..+-- ..| ...+.+++|||.+|+|+ ...+ ..+.+|+.|++|+|+.|.+...|
T Consensus 35 g~s~~~v~s~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iS-dWseI~~ile~lP~l~~LNls~N~L~s~I 113 (418)
T KOG2982|consen 35 GLSYLGVSSLRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLIS-DWSEIGAILEQLPALTTLNLSCNSLSSDI 113 (418)
T ss_pred ccceeeeccccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhc-cHHHHHHHHhcCccceEeeccCCcCCCcc
Confidence 3333344444455566666666653211 123 34577888888888887 2211 12467788888888888775443
Q ss_pred CccccccCCCccCCCCcccEEEeecccCCCc-cCCccccCCCCceEEeeecCC
Q 002376 185 PPSIANLIPSDLSRLENLKVLDLTINRLAGT-VPSTIYNMTSLVHLRLASNQL 236 (929)
Q Consensus 185 p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l 236 (929)
- .+ | ..+.+|++|-|.+..+.-. ....+..++.+++|.+|.|.+
T Consensus 114 ~----~l-p---~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~ 158 (418)
T KOG2982|consen 114 K----SL-P---LPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSL 158 (418)
T ss_pred c----cC-c---ccccceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchh
Confidence 2 11 1 2356777777777666533 223445566666666666643
No 496
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.05 E-value=3.3e-07 Score=82.76 Aligned_cols=87 Identities=24% Similarity=0.365 Sum_probs=42.4
Q ss_pred CccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCC
Q 002376 482 NVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLT 561 (929)
Q Consensus 482 ~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 561 (929)
.++.|+|++|.++ .+|..+..++.|+.|+++.|.|. ..|..+..|.+|-.||.-+|.+. .+|..+-.-+.....++.
T Consensus 78 t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lg 154 (177)
T KOG4579|consen 78 TATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLG 154 (177)
T ss_pred hhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhc
Confidence 4444555555554 34555555555555555555555 34444444555555555555554 333332222222333445
Q ss_pred CCcCcccCCC
Q 002376 562 FNNLEGVVPS 571 (929)
Q Consensus 562 ~N~l~~~~p~ 571 (929)
++.+.+.-+.
T Consensus 155 nepl~~~~~~ 164 (177)
T KOG4579|consen 155 NEPLGDETKK 164 (177)
T ss_pred CCcccccCcc
Confidence 5555554443
No 497
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.04 E-value=1.4e-06 Score=97.86 Aligned_cols=160 Identities=20% Similarity=0.130 Sum_probs=113.1
Q ss_pred HHhhCCCCCceeecccCceeEEeccccCc----------HHHHHHHHHHHHccCCcc-ccceeeecccCCCCCcceEEEE
Q 002376 657 RRATGNFSHENLIGSGSFGSVLHNERTGS----------WKSFIAECETLRNVRHRN-LVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 657 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~----------~~~~~~E~~~l~~l~Hpn-iv~l~~~~~~~~~~~~~~~~lV 725 (929)
+..+.-+..-+-.++|+++++||.+.... .....-++++|.+++||| .|+.++-+ ..+.+.+++
T Consensus 238 kDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~l~~rl~~eLLdK~n~P~~~v~~~~d~-----~~E~~~~i~ 312 (829)
T KOG0576|consen 238 KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTLSRRLAIELLDKVNNPNPVVRYLEDY-----DGEDYLWIP 312 (829)
T ss_pred cCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccchhhHHHHHHHHHccCCCCcccccccC-----Ccccccchh
Confidence 33444444456678999999999887622 234456889999999999 55444443 345568999
Q ss_pred EEecCCC-Ccccccc---------ccccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 726 YEFLSNG-SLGDWIH---------GERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 726 ~e~~~~g-sL~~~l~---------~~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
++|+..| +-..-.. +.......-+++++|+|+. .=+||| ||+..+ +..|..||+....+.+.
T Consensus 313 ~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~ 384 (829)
T KOG0576|consen 313 MRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPPQLTRT 384 (829)
T ss_pred hhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCcccCcc
Confidence 9999887 2222111 0111123346789999986 458999 777665 68899999998877533
Q ss_pred cCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcC
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSES 836 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~ 836 (929)
. ......+|+.|+|||+.....+..+.|+|+.+.
T Consensus 385 ~-------~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~ 418 (829)
T KOG0576|consen 385 M-------KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAV 418 (829)
T ss_pred c-------ccccCCCCCCCCCchhhcccccccCCCccCCCc
Confidence 2 234467999999999999999999999999885
No 498
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.02 E-value=4.2e-06 Score=95.40 Aligned_cols=149 Identities=16% Similarity=0.180 Sum_probs=93.7
Q ss_pred ccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC---CCCccccceeccccccccccccCC
Q 002376 746 LDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN---QSSISSTHVFMGSIGYVPPEYGLG 822 (929)
Q Consensus 746 ~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~---~~~~~~~~~~~gt~~y~aPE~~~~ 822 (929)
.+++.|+.|+|.. .++||++|.|++|.++..+..||+.|+.+....+...- ........-..-...|.|||++.+
T Consensus 106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 4566899999986 48999999999999999999999999987654321110 000001111123457999999999
Q ss_pred CCCCCCCCCCCCcCCCCCcc-hhHHhhhcCCc----hhhhc-cChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCC
Q 002376 823 ERPSTAGDVPTSESFAGEFN-IVKWVESNLPE----NVLQV-LDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTES 896 (929)
Q Consensus 823 ~~~~~~~DV~s~g~~~~~~~-~~~~~~~~~~~----~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~d 896 (929)
...+.++|++|+|+..|-+. -+.|....... ..... .+..... +. . ..++.+.+-++ +.+..+
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~-~s--~----~~p~el~~~l~----k~l~~~ 252 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFG-YS--N----NLPSELRESLK----KLLNGD 252 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhccccccccc-cc--c----cCcHHHHHHHH----HHhcCC
Confidence 88999999999998766543 44554443322 11111 1111111 11 1 11122333333 777899
Q ss_pred CCCCCCHHHHH
Q 002376 897 PGGRIGIREAL 907 (929)
Q Consensus 897 P~~RPs~~ev~ 907 (929)
+..||++.++.
T Consensus 253 ~~~rp~~~~l~ 263 (700)
T KOG2137|consen 253 SAVRPTLDLLL 263 (700)
T ss_pred cccCcchhhhh
Confidence 99999877754
No 499
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=97.92 E-value=1.7e-05 Score=81.33 Aligned_cols=101 Identities=22% Similarity=0.258 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHccCCc--cccceeeecccCCCCCcceEEEEEEecCCC-Cccccccc--------cccccccHHHHHHHh
Q 002376 687 KSFIAECETLRNVRHR--NLVKLITSCSSLDSKNMEFLALVYEFLSNG-SLGDWIHG--------ERKNELDITSALDYL 755 (929)
Q Consensus 687 ~~~~~E~~~l~~l~Hp--niv~l~~~~~~~~~~~~~~~~lV~e~~~~g-sL~~~l~~--------~~~~~~~ia~aL~yL 755 (929)
..+.+|...+.++... .+.+.+++........ ...++|+|++++. +|.+++.. .+....+++..++-|
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~-~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~l 134 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGG-YRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKL 134 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCc-eeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHH
Confidence 4577888887777533 3445555554433222 4468999999874 78888764 123456789999999
Q ss_pred hhCCCCCEEecCCCCCCeeecCCC---ceEEeccccccc
Q 002376 756 HNDCEVPVVHSDLKPGNILLDEEM---TAKVGDFGLARF 791 (929)
Q Consensus 756 H~~~~~~iiHrDlk~~NILl~~~~---~~ki~DfGla~~ 791 (929)
|.. +|+|+|+++.|||++.+. .+.+.||+-++.
T Consensus 135 H~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 135 HDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 998 999999999999999886 899999998774
No 500
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.88 E-value=7e-06 Score=60.42 Aligned_cols=36 Identities=36% Similarity=0.595 Sum_probs=14.9
Q ss_pred CCcEEeCCCCCCCCCcccccccccccceecccccccC
Q 002376 120 RLRVLNISFNNLQGELPVNISKLTELKMLDLMANKIT 156 (929)
Q Consensus 120 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 156 (929)
+|++|+|++|+|+ .+|..|++|++|++|++++|+|+
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 3444444444444 23333444444444444444443
Done!