Query 002376
Match_columns 929
No_of_seqs 996 out of 5504
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 23:51:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002376.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002376hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 6.7E-80 2.3E-84 759.8 37.2 563 21-598 5-751 (768)
2 3rgz_A Protein brassinosteroid 100.0 2.6E-60 9E-65 585.3 29.7 473 72-567 179-742 (768)
3 4eco_A Uncharacterized protein 100.0 5.3E-60 1.8E-64 569.5 24.6 499 22-567 24-601 (636)
4 3t6q_A CD180 antigen; protein- 100.0 7.4E-58 2.5E-62 550.4 37.3 502 61-591 14-562 (606)
5 1ziw_A TOLL-like receptor 3; i 100.0 4.1E-57 1.4E-61 551.4 38.1 504 71-591 25-624 (680)
6 3j0a_A TOLL-like receptor 5; m 100.0 2.7E-56 9.4E-61 555.2 40.0 494 59-590 14-561 (844)
7 4ecn_A Leucine-rich repeat pro 100.0 4.6E-57 1.6E-61 552.1 31.1 510 21-590 262-865 (876)
8 3vq2_A TLR4, TOLL-like recepto 100.0 7.8E-57 2.7E-61 541.5 31.4 485 71-591 32-560 (606)
9 1ziw_A TOLL-like receptor 3; i 100.0 1.2E-53 4E-58 520.9 42.1 494 76-588 9-596 (680)
10 3t6q_A CD180 antigen; protein- 100.0 6.5E-54 2.2E-58 516.1 36.4 487 59-570 43-564 (606)
11 3vq2_A TLR4, TOLL-like recepto 100.0 7.6E-53 2.6E-57 506.8 31.1 465 72-571 57-563 (606)
12 3j0a_A TOLL-like receptor 5; m 100.0 2.5E-51 8.7E-56 510.5 39.9 497 75-591 8-541 (844)
13 2z81_A CD282 antigen, TOLL-lik 100.0 3.3E-52 1.1E-56 495.2 28.5 483 58-570 3-514 (549)
14 2z63_A TOLL-like receptor 4, v 100.0 4.1E-51 1.4E-55 488.1 33.2 487 72-591 29-533 (570)
15 2z63_A TOLL-like receptor 4, v 100.0 3.4E-50 1.2E-54 480.1 29.2 467 72-572 53-537 (570)
16 2z81_A CD282 antigen, TOLL-lik 100.0 8E-50 2.7E-54 474.6 29.4 488 65-591 3-512 (549)
17 2z7x_B TOLL-like receptor 1, v 100.0 1.4E-49 4.8E-54 469.2 29.0 454 75-591 4-483 (520)
18 4g8a_A TOLL-like receptor 4; l 100.0 2.5E-47 8.5E-52 461.2 35.1 486 72-591 53-582 (635)
19 4ecn_A Leucine-rich repeat pro 100.0 5E-48 1.7E-52 472.4 25.5 462 95-592 323-843 (876)
20 2z7x_B TOLL-like receptor 1, v 100.0 3.2E-48 1.1E-52 457.6 17.9 439 71-569 21-484 (520)
21 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.3E-46 7.7E-51 445.7 30.7 458 74-591 34-512 (562)
22 4eco_A Uncharacterized protein 100.0 1.2E-47 4.1E-52 461.9 16.1 514 26-592 25-603 (636)
23 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4.4E-45 1.5E-49 434.6 21.4 444 71-570 52-514 (562)
24 1jl5_A Outer protein YOPM; leu 100.0 5.6E-44 1.9E-48 411.3 22.8 410 88-590 4-430 (454)
25 3v47_A TOLL-like receptor 5B a 100.0 4.1E-43 1.4E-47 406.6 28.7 378 95-571 30-413 (455)
26 3omv_A RAF proto-oncogene seri 100.0 5.8E-46 2E-50 400.7 3.2 240 660-916 35-301 (307)
27 4aoj_A High affinity nerve gro 100.0 1.3E-45 4.6E-50 403.6 3.0 235 661-916 41-320 (329)
28 4asz_A BDNF/NT-3 growth factor 100.0 3.7E-46 1.3E-50 402.3 -1.6 236 661-917 13-291 (299)
29 4g8a_A TOLL-like receptor 4; l 100.0 1.3E-42 4.5E-47 419.8 29.1 466 72-569 77-583 (635)
30 4gt4_A Tyrosine-protein kinase 100.0 8.8E-46 3E-50 401.2 -0.1 231 662-913 27-304 (308)
31 1ogq_A PGIP-2, polygalacturona 100.0 2.5E-43 8.4E-48 386.6 17.8 293 24-388 2-302 (313)
32 1jl5_A Outer protein YOPM; leu 100.0 1.7E-42 5.8E-47 399.0 24.1 407 71-572 11-435 (454)
33 3v47_A TOLL-like receptor 5B a 100.0 9.3E-42 3.2E-46 395.3 28.5 364 200-591 30-410 (455)
34 4ase_A Vascular endothelial gr 100.0 7.5E-45 2.6E-49 400.8 0.3 247 651-917 54-349 (353)
35 3hmm_A TGF-beta receptor type- 100.0 1.2E-44 4.2E-49 393.3 1.6 251 662-916 4-298 (303)
36 4g3f_A NF-kappa-beta-inducing 100.0 2.1E-44 7.2E-49 392.1 -0.3 244 659-918 56-319 (336)
37 3fpq_A Serine/threonine-protei 100.0 1.2E-43 4.2E-48 379.8 4.4 227 664-908 29-282 (290)
38 4fih_A Serine/threonine-protei 100.0 6.4E-44 2.2E-48 389.4 1.6 227 661-908 74-323 (346)
39 4fie_A Serine/threonine-protei 100.0 5.6E-43 1.9E-47 391.3 2.7 227 661-908 151-400 (423)
40 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.6E-43 5.6E-48 380.4 -1.8 225 661-907 32-283 (311)
41 3bz5_A Internalin-J, INLJ; leu 100.0 3.3E-40 1.1E-44 380.2 25.6 364 83-572 30-393 (457)
42 4b9d_A Serine/threonine-protei 100.0 1.1E-42 3.7E-47 380.3 3.4 225 661-908 24-276 (350)
43 3bz5_A Internalin-J, INLJ; leu 100.0 4.5E-40 1.5E-44 379.1 24.1 352 72-549 43-394 (457)
44 3hyh_A Carbon catabolite-derep 100.0 3E-42 1E-46 365.6 3.0 223 660-908 12-262 (275)
45 4g31_A Eukaryotic translation 100.0 6.6E-42 2.3E-46 369.9 4.7 234 661-908 5-279 (299)
46 1o6v_A Internalin A; bacterial 100.0 2E-38 6.7E-43 368.1 32.1 119 95-232 46-164 (466)
47 1o6v_A Internalin A; bacterial 100.0 3E-38 1E-42 366.6 30.5 345 117-542 44-388 (466)
48 3ubd_A Ribosomal protein S6 ki 100.0 4.3E-42 1.5E-46 369.5 -3.3 219 661-903 24-271 (304)
49 2id5_A Lingo-1, leucine rich r 100.0 2.9E-38 9.8E-43 368.2 25.8 346 228-593 15-360 (477)
50 2id5_A Lingo-1, leucine rich r 100.0 4.8E-37 1.6E-41 357.9 27.9 315 81-440 21-335 (477)
51 3o6n_A APL1; leucine-rich repe 100.0 2.3E-36 8E-41 342.4 25.3 349 49-462 3-352 (390)
52 3oja_B Anopheles plasmodium-re 100.0 3.6E-36 1.2E-40 359.8 25.7 350 46-463 6-359 (597)
53 4b99_A Mitogen-activated prote 100.0 1.8E-38 6.2E-43 356.1 5.2 182 661-848 54-263 (398)
54 4f9c_A Cell division cycle 7-r 100.0 1.8E-38 6E-43 352.5 4.0 183 658-848 18-247 (361)
55 1ogq_A PGIP-2, polygalacturona 100.0 1.9E-36 6.5E-41 331.9 17.1 255 328-593 50-308 (313)
56 3v5w_A G-protein coupled recep 100.0 1E-37 3.6E-42 363.7 1.6 224 661-908 189-449 (689)
57 4fcg_A Uncharacterized protein 100.0 9.8E-36 3.4E-40 328.2 16.2 275 22-311 21-315 (328)
58 3o6n_A APL1; leucine-rich repe 100.0 6.7E-35 2.3E-39 330.4 23.3 335 199-593 44-378 (390)
59 3uto_A Twitchin; kinase, muscl 100.0 3.5E-37 1.2E-41 362.9 3.9 228 660-908 156-410 (573)
60 3oja_B Anopheles plasmodium-re 100.0 5.2E-35 1.8E-39 349.8 22.0 335 199-593 50-384 (597)
61 4fmz_A Internalin; leucine ric 100.0 1.4E-33 4.8E-38 314.3 26.8 307 196-566 40-346 (347)
62 2qkw_B Protein kinase; three-h 100.0 9.7E-36 3.3E-40 328.0 5.4 254 650-915 28-315 (321)
63 4fmz_A Internalin; leucine ric 100.0 3.6E-33 1.2E-37 311.0 25.4 319 149-542 28-346 (347)
64 3gxj_A TGF-beta receptor type- 100.0 1.4E-35 4.6E-40 323.8 5.1 248 661-916 3-298 (303)
65 3s95_A LIMK-1, LIM domain kina 100.0 2.3E-35 7.7E-40 323.3 6.8 245 660-919 9-286 (310)
66 3soc_A Activin receptor type-2 100.0 4.4E-36 1.5E-40 330.8 -0.5 251 660-916 23-319 (322)
67 3fxz_A Serine/threonine-protei 100.0 2E-35 6.7E-40 321.6 4.7 228 660-908 19-269 (297)
68 3q4u_A Activin receptor type-1 100.0 1.8E-35 6.1E-40 322.6 3.0 248 660-913 7-300 (301)
69 3uim_A Brassinosteroid insensi 100.0 6.7E-35 2.3E-39 322.0 7.1 245 648-912 17-308 (326)
70 3p86_A Serine/threonine-protei 100.0 7.2E-35 2.5E-39 318.8 6.5 244 654-919 30-302 (309)
71 2nru_A Interleukin-1 receptor- 100.0 6.6E-35 2.3E-39 319.1 5.7 250 648-915 12-306 (307)
72 2psq_A Fibroblast growth facto 100.0 2.3E-34 7.7E-39 323.0 10.1 238 660-918 80-367 (370)
73 2c30_A Serine/threonine-protei 100.0 8E-35 2.7E-39 320.4 6.2 240 648-908 22-294 (321)
74 2ft3_A Biglycan; proteoglycan, 100.0 1.9E-32 6.4E-37 303.1 24.9 288 225-564 34-331 (332)
75 3lb7_A RAF proto-oncogene seri 100.0 7.6E-35 2.6E-39 318.4 5.0 241 660-917 35-302 (307)
76 3ugc_A Tyrosine-protein kinase 100.0 1.9E-35 6.4E-40 321.5 -1.3 247 660-917 9-293 (295)
77 3vhe_A Vascular endothelial gr 100.0 4.9E-35 1.7E-39 327.7 1.7 249 650-917 11-357 (359)
78 2qol_A Ephrin receptor; recept 100.0 7.7E-35 2.6E-39 327.0 2.9 238 661-918 45-312 (373)
79 1xku_A Decorin; proteoglycan, 100.0 6.6E-32 2.3E-36 298.5 25.7 289 225-564 32-330 (330)
80 2ft3_A Biglycan; proteoglycan, 100.0 3.6E-32 1.2E-36 300.9 23.6 252 194-492 72-331 (332)
81 2eva_A TAK1 kinase - TAB1 chim 100.0 1.2E-34 4.1E-39 316.9 2.9 238 661-921 8-269 (307)
82 3op5_A Serine/threonine-protei 100.0 1.3E-34 4.4E-39 324.8 2.4 256 659-920 33-334 (364)
83 3kul_A Ephrin type-A receptor 100.0 5.3E-34 1.8E-38 314.4 7.1 236 661-916 49-314 (325)
84 3kex_A Receptor tyrosine-prote 100.0 1.3E-34 4.5E-39 319.5 2.1 234 661-918 13-279 (325)
85 2yab_A Death-associated protei 100.0 4.7E-34 1.6E-38 318.5 6.3 228 660-908 11-272 (361)
86 1xku_A Decorin; proteoglycan, 100.0 1.2E-31 4.2E-36 296.4 25.3 291 120-492 32-330 (330)
87 3zgw_A Maternal embryonic leuc 100.0 1.9E-34 6.4E-39 319.7 2.4 227 659-908 8-260 (347)
88 3fe3_A MAP/microtubule affinit 100.0 2.9E-34 1E-38 316.2 3.8 225 659-908 13-264 (328)
89 3g2f_A Bone morphogenetic prot 100.0 1.4E-34 4.9E-39 320.8 1.0 261 660-921 12-324 (336)
90 4eqm_A Protein kinase; transfe 100.0 7.3E-34 2.5E-38 308.7 6.5 239 660-916 10-276 (294)
91 3poz_A Epidermal growth factor 100.0 1E-33 3.5E-38 312.6 7.4 234 661-917 15-280 (327)
92 1tki_A Titin; serine kinase, m 100.0 5.4E-34 1.9E-38 313.5 5.0 228 660-908 4-257 (321)
93 1o6l_A RAC-beta serine/threoni 100.0 1.1E-33 3.9E-38 312.4 7.1 225 660-908 4-260 (337)
94 3qd2_B Eukaryotic translation 100.0 1.2E-33 4.1E-38 312.6 7.3 234 660-908 5-325 (332)
95 4euu_A Serine/threonine-protei 100.0 1E-33 3.4E-38 311.6 6.5 239 661-912 9-306 (319)
96 3mdy_A Bone morphogenetic prot 100.0 1.4E-33 4.6E-38 313.0 7.2 257 657-917 33-333 (337)
97 3cbl_A C-FES, proto-oncogene t 100.0 5.1E-34 1.8E-38 321.2 3.3 237 659-916 112-375 (377)
98 2y0a_A Death-associated protei 100.0 1.1E-33 3.7E-38 312.1 5.2 227 661-908 11-271 (326)
99 4aw2_A Serine/threonine-protei 100.0 1.3E-34 4.4E-39 330.2 -2.4 237 652-908 65-338 (437)
100 4hcu_A Tyrosine-protein kinase 100.0 2.1E-33 7E-38 301.0 6.9 234 661-916 10-267 (269)
101 1z7x_W Ribonuclease inhibitor; 100.0 8.2E-36 2.8E-40 345.9 -12.7 369 143-543 3-412 (461)
102 3l9p_A Anaplastic lymphoma kin 100.0 1.1E-33 3.9E-38 317.0 4.7 237 661-918 71-348 (367)
103 3v8s_A RHO-associated protein 100.0 2.4E-34 8.1E-39 325.6 -1.0 235 653-908 61-329 (410)
104 3tt0_A Basic fibroblast growth 100.0 2.4E-33 8.2E-38 316.5 7.2 241 660-921 68-358 (382)
105 2izr_A Casein kinase I isoform 100.0 1.1E-33 3.7E-38 312.8 4.2 245 660-917 8-283 (330)
106 3lzb_A Epidermal growth factor 100.0 2.9E-33 9.9E-38 308.7 7.5 238 660-920 14-283 (327)
107 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.9E-33 6.7E-38 301.0 5.8 235 660-916 7-265 (268)
108 1z7x_W Ribonuclease inhibitor; 100.0 1.3E-35 4.5E-40 344.2 -12.0 311 201-547 86-445 (461)
109 3c1x_A Hepatocyte growth facto 100.0 2E-33 7E-38 315.1 6.2 240 662-920 90-360 (373)
110 3lxp_A Non-receptor tyrosine-p 100.0 5E-34 1.7E-38 313.8 1.0 246 663-919 33-314 (318)
111 4dc2_A Protein kinase C IOTA t 100.0 9.3E-34 3.2E-38 318.9 3.2 226 660-903 51-307 (396)
112 1rjb_A FL cytokine receptor; k 100.0 7.6E-34 2.6E-38 316.0 2.3 241 658-920 42-339 (344)
113 3hko_A Calcium/calmodulin-depe 100.0 1.6E-33 5.6E-38 313.5 4.9 237 656-908 21-330 (345)
114 2bdw_A Hypothetical protein K1 100.0 9.4E-34 3.2E-38 316.9 2.9 228 660-908 28-284 (362)
115 3og7_A AKAP9-BRAF fusion prote 100.0 7.4E-34 2.5E-38 308.0 1.8 240 659-915 22-288 (289)
116 1k9a_A Carboxyl-terminal SRC k 100.0 6.6E-33 2.3E-37 319.4 9.9 232 660-916 192-446 (450)
117 3f66_A Hepatocyte growth facto 100.0 4.4E-33 1.5E-37 303.3 7.9 240 661-918 25-294 (298)
118 1csn_A Casein kinase-1; phosph 100.0 2.2E-33 7.5E-38 305.5 5.4 249 660-920 9-288 (298)
119 2i1m_A Macrophage colony-stimu 100.0 5.8E-34 2E-38 315.5 0.5 246 655-920 40-331 (333)
120 2zv2_A Calcium/calmodulin-depe 100.0 1.8E-33 6.3E-38 306.3 4.4 229 660-908 12-292 (298)
121 3soa_A Calcium/calmodulin-depe 100.0 6.5E-33 2.2E-37 317.4 8.9 230 659-908 9-267 (444)
122 2v62_A Serine/threonine-protei 100.0 1.3E-33 4.4E-38 314.2 2.7 249 661-915 37-328 (345)
123 3txo_A PKC-L, NPKC-ETA, protei 100.0 1E-33 3.5E-38 314.9 1.9 226 659-908 21-280 (353)
124 1mp8_A Focal adhesion kinase 1 100.0 3E-33 1E-37 301.8 5.5 236 660-918 14-279 (281)
125 3lxl_A Tyrosine-protein kinase 100.0 6E-34 2E-38 314.5 -0.4 247 661-918 23-306 (327)
126 3h4j_B AMPK kdaid, SNF1-like p 100.0 6.9E-34 2.4E-38 313.8 0.0 223 660-908 8-258 (336)
127 1fot_A TPK1 delta, CAMP-depend 100.0 4.4E-33 1.5E-37 305.5 6.1 222 660-908 5-258 (318)
128 1kob_A Twitchin; kinase, intra 100.0 1.8E-33 6.3E-38 316.5 3.1 228 660-908 50-304 (387)
129 4fvq_A Tyrosine-protein kinase 100.0 1.2E-33 4.2E-38 306.2 1.6 226 661-915 8-275 (289)
130 3c0i_A Peripheral plasma membr 100.0 7.8E-33 2.7E-37 308.4 7.7 227 661-908 24-286 (351)
131 2z80_A TOLL-like receptor 2, v 100.0 2.5E-31 8.5E-36 296.8 19.9 294 51-417 22-317 (353)
132 3gen_A Tyrosine-protein kinase 100.0 8.5E-33 2.9E-37 298.6 7.6 236 659-916 22-281 (283)
133 2ivs_A Proto-oncogene tyrosine 100.0 7E-33 2.4E-37 304.0 6.9 236 660-916 22-312 (314)
134 1b6c_B TGF-B superfamily recep 100.0 2.3E-33 7.8E-38 311.9 2.8 251 657-916 38-337 (342)
135 1luf_A Muscle-specific tyrosin 100.0 2.9E-33 1E-37 311.1 3.6 242 656-918 42-338 (343)
136 3qup_A Tyrosine-protein kinase 100.0 4.2E-33 1.4E-37 307.2 4.8 245 657-917 19-300 (323)
137 1qcf_A Haematopoetic cell kina 100.0 2.5E-33 8.5E-38 323.5 3.0 238 657-917 184-446 (454)
138 3tki_A Serine/threonine-protei 100.0 1.1E-32 3.9E-37 303.4 8.1 230 660-908 6-261 (323)
139 3ttj_A Mitogen-activated prote 100.0 4.9E-33 1.7E-37 321.0 5.5 178 660-848 61-263 (464)
140 3brb_A Proto-oncogene tyrosine 100.0 4.1E-33 1.4E-37 305.8 4.6 249 654-918 27-311 (313)
141 3niz_A Rhodanese family protei 100.0 6.1E-33 2.1E-37 303.9 5.8 174 660-848 20-220 (311)
142 1xjd_A Protein kinase C, theta 100.0 1.7E-33 5.7E-38 312.0 1.1 227 657-907 13-268 (345)
143 2x4f_A Myosin light chain kina 100.0 2.7E-33 9.2E-38 314.3 2.8 230 665-915 93-351 (373)
144 3a8x_A Protein kinase C IOTA t 100.0 4.3E-33 1.5E-37 309.2 4.3 226 661-903 9-264 (345)
145 1t46_A HOMO sapiens V-KIT hard 100.0 1.5E-33 5.2E-38 309.1 0.6 239 659-917 21-309 (313)
146 2w4o_A Calcium/calmodulin-depe 100.0 7.2E-33 2.4E-37 308.3 6.0 230 659-908 51-305 (349)
147 3rp9_A Mitogen-activated prote 100.0 7.9E-33 2.7E-37 320.2 6.5 180 660-843 52-279 (458)
148 3ork_A Serine/threonine protei 100.0 1E-33 3.5E-38 310.2 -0.9 242 660-914 11-280 (311)
149 1opk_A P150, C-ABL, proto-onco 100.0 7.1E-33 2.4E-37 322.8 6.1 233 660-914 219-477 (495)
150 2vd5_A DMPK protein; serine/th 100.0 1.1E-33 3.7E-38 320.4 -0.9 237 651-908 51-327 (412)
151 1rdq_E PKA C-alpha, CAMP-depen 100.0 6.1E-33 2.1E-37 308.5 5.1 222 660-908 40-293 (350)
152 3dtc_A Mitogen-activated prote 100.0 8.1E-33 2.8E-37 296.7 5.8 233 660-913 6-271 (271)
153 3pls_A Macrophage-stimulating 100.0 2.4E-32 8.1E-37 297.4 9.2 240 662-920 22-292 (298)
154 3gni_B Strad alpha; kinase fol 100.0 3.4E-33 1.1E-37 316.3 2.6 182 660-849 24-238 (389)
155 4e5w_A Tyrosine-protein kinase 100.0 1.1E-33 3.9E-38 308.5 -1.3 243 661-914 21-301 (302)
156 3kn6_A Ribosomal protein S6 ki 100.0 2.4E-33 8.2E-38 309.1 1.1 228 666-907 16-269 (325)
157 4eut_A Serine/threonine-protei 100.0 2.3E-33 7.7E-38 318.2 0.7 243 661-916 9-310 (396)
158 3kmu_A ILK, integrin-linked ki 100.0 1.5E-33 5.1E-38 302.2 -0.8 232 661-915 10-270 (271)
159 2i0e_A Protein kinase C-beta I 100.0 8.8E-33 3E-37 307.2 5.2 226 659-908 18-276 (353)
160 4fr4_A YANK1, serine/threonine 100.0 3E-32 1E-36 305.6 9.5 225 661-908 15-271 (384)
161 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4.7E-33 1.6E-37 320.9 3.0 240 659-921 182-446 (452)
162 3kfa_A Tyrosine-protein kinase 100.0 6.1E-33 2.1E-37 300.5 3.7 241 656-918 8-274 (288)
163 4hgt_A Casein kinase I isoform 100.0 7.4E-33 2.5E-37 301.0 4.2 249 659-918 7-283 (296)
164 2pmi_A Negative RE, cyclin-dep 100.0 3.7E-33 1.3E-37 306.6 1.8 174 660-848 4-209 (317)
165 3o0g_A Cell division protein k 100.0 6.9E-33 2.3E-37 300.8 3.8 169 661-844 2-198 (292)
166 1mqb_A Ephrin type-A receptor 100.0 2.1E-32 7.1E-37 302.8 7.3 237 661-919 44-313 (333)
167 3cc6_A Protein tyrosine kinase 100.0 1.6E-32 5.5E-37 296.1 6.2 237 659-918 10-276 (281)
168 3p1a_A MYT1 kinase, membrane-a 100.0 3.8E-33 1.3E-37 305.7 1.2 217 661-908 57-304 (311)
169 2a2a_A Death-associated protei 100.0 1.3E-32 4.5E-37 302.9 5.6 228 660-908 11-272 (321)
170 2xir_A Vascular endothelial gr 100.0 1.1E-32 3.7E-37 302.7 4.8 249 651-918 17-313 (316)
171 4f0f_A Serine/threonine-protei 100.0 2.3E-32 7.7E-37 295.9 7.2 229 660-913 18-287 (287)
172 1qpc_A LCK kinase; alpha beta 100.0 1.2E-32 4.2E-37 296.7 5.0 241 658-921 10-275 (279)
173 1t4h_A Serine/threonine-protei 100.0 1.4E-32 4.9E-37 298.0 5.4 227 662-908 27-282 (290)
174 3fdn_A Serine/threonine-protei 100.0 1.2E-32 4.1E-37 296.8 4.8 225 659-909 7-258 (279)
175 1xbb_A Tyrosine-protein kinase 100.0 1E-32 3.4E-37 299.4 4.0 246 659-925 14-289 (291)
176 2ozo_A Tyrosine-protein kinase 100.0 8.6E-33 2.9E-37 329.7 3.7 235 663-919 337-602 (613)
177 2pvf_A Fibroblast growth facto 100.0 2.6E-32 9E-37 302.2 7.3 240 660-920 34-323 (334)
178 2r5t_A Serine/threonine-protei 100.0 3.4E-33 1.2E-37 312.7 0.0 227 660-910 37-291 (373)
179 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.4E-34 2.2E-38 313.1 -5.8 259 653-929 25-316 (319)
180 1p4o_A Insulin-like growth fac 100.0 9.2E-33 3.2E-37 304.3 3.2 242 651-915 15-299 (322)
181 3g33_A Cell division protein k 100.0 1.3E-32 4.5E-37 301.0 4.4 237 659-908 7-296 (308)
182 3uzp_A CKI-delta, CKID, casein 100.0 1.7E-32 5.8E-37 298.2 5.2 249 660-919 8-284 (296)
183 1u59_A Tyrosine-protein kinase 100.0 4.2E-32 1.4E-36 293.8 8.2 246 661-927 9-284 (287)
184 3n9x_A Phosphotransferase; mal 100.0 2.3E-32 7.9E-37 313.3 6.3 180 660-843 25-247 (432)
185 2wqm_A Serine/threonine-protei 100.0 2.5E-32 8.5E-37 299.1 6.2 242 660-921 31-303 (310)
186 3uc3_A Serine/threonine-protei 100.0 7.7E-33 2.6E-37 309.5 2.1 228 660-908 19-274 (361)
187 2acx_A G protein-coupled recep 100.0 5E-33 1.7E-37 324.5 0.5 228 660-908 183-444 (576)
188 3a62_A Ribosomal protein S6 ki 100.0 1.2E-32 4.2E-37 303.7 3.6 225 660-908 16-276 (327)
189 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2E-32 6.7E-37 307.2 5.2 236 657-918 61-342 (365)
190 2w1i_A JAK2; chromosomal rearr 100.0 5.8E-33 2E-37 306.4 0.9 247 661-918 41-325 (326)
191 2jii_A Serine/threonine-protei 100.0 5.4E-33 1.9E-37 310.1 0.6 251 661-920 42-341 (352)
192 2qr7_A Ribosomal protein S6 ki 100.0 2E-33 6.7E-38 311.6 -3.0 231 660-908 21-277 (342)
193 4ejn_A RAC-alpha serine/threon 100.0 5.6E-33 1.9E-37 320.1 0.3 225 660-908 147-404 (446)
194 3oz6_A Mitogen-activated prote 100.0 6.4E-33 2.2E-37 313.8 0.6 183 659-848 7-231 (388)
195 2y94_A 5'-AMP-activated protei 100.0 3E-32 1E-36 313.9 6.0 224 660-908 15-266 (476)
196 3i6u_A CDS1, serine/threonine- 100.0 6.1E-32 2.1E-36 308.4 8.5 229 659-908 133-399 (419)
197 3t9t_A Tyrosine-protein kinase 100.0 3.5E-32 1.2E-36 291.0 5.9 233 661-915 8-264 (267)
198 1nxk_A MAP kinase-activated pr 100.0 4.9E-32 1.7E-36 307.1 7.3 235 661-908 61-321 (400)
199 1byg_A CSK, protein (C-termina 100.0 3.2E-32 1.1E-36 293.3 5.4 232 660-916 20-274 (278)
200 1ob3_A PFPK5, cell division co 100.0 8.9E-33 3E-37 299.3 1.0 172 661-847 2-200 (288)
201 2a19_B Interferon-induced, dou 100.0 2.1E-32 7.1E-37 295.5 3.5 237 660-921 10-280 (284)
202 3bhy_A Death-associated protei 100.0 3.9E-32 1.3E-36 293.3 5.7 234 661-915 5-274 (283)
203 3cok_A Serine/threonine-protei 100.0 3.9E-32 1.3E-36 292.6 4.6 225 660-908 10-262 (278)
204 2vgo_A Serine/threonine-protei 100.0 2.9E-32 9.9E-37 294.6 3.6 223 660-908 13-262 (284)
205 3llt_A Serine/threonine kinase 100.0 1.6E-32 5.4E-37 307.4 1.4 182 649-848 23-259 (360)
206 3ogk_B Coronatine-insensitive 100.0 2.5E-33 8.4E-38 335.9 -5.6 455 57-538 40-547 (592)
207 1u46_A ACK-1, activated CDC42 100.0 5.5E-33 1.9E-37 301.3 -2.4 238 660-917 17-286 (291)
208 4fl3_A Tyrosine-protein kinase 100.0 8.6E-32 2.9E-36 321.9 7.6 230 667-917 375-633 (635)
209 3dls_A PAS domain-containing s 100.0 1.4E-32 4.8E-37 304.2 0.7 219 660-909 23-275 (335)
210 1u5q_A Serine/threonine protei 100.0 9.5E-33 3.3E-37 307.0 -0.7 221 661-908 54-305 (348)
211 1fvr_A Tyrosine-protein kinase 100.0 5.4E-32 1.9E-36 298.8 5.2 231 661-917 25-302 (327)
212 3f3z_A Calcium/calmodulin-depe 100.0 1.5E-31 5.2E-36 287.8 8.5 227 660-908 8-261 (277)
213 1zy4_A Serine/threonine-protei 100.0 3.3E-32 1.1E-36 296.8 3.3 237 660-908 5-283 (303)
214 2h34_A Serine/threonine-protei 100.0 1E-31 3.5E-36 294.0 7.2 240 659-918 32-299 (309)
215 3oja_A Leucine-rich immune mol 100.0 5E-32 1.7E-36 314.8 4.8 243 327-592 33-285 (487)
216 3kk8_A Calcium/calmodulin depe 100.0 1.7E-31 5.8E-36 288.5 8.4 228 660-908 5-261 (284)
217 2eue_A Carbon catabolite derep 100.0 4.1E-32 1.4E-36 291.9 3.5 223 660-908 12-262 (275)
218 3lm5_A Serine/threonine-protei 100.0 2.3E-32 7.8E-37 301.7 1.4 239 649-908 16-287 (327)
219 3c4z_A Rhodopsin kinase; Ser/T 100.0 4.8E-32 1.6E-36 315.6 4.1 223 660-903 184-438 (543)
220 2rku_A Serine/threonine-protei 100.0 4.3E-32 1.5E-36 294.8 3.4 225 660-908 14-265 (294)
221 4agu_A Cyclin-dependent kinase 100.0 2.9E-32 1E-36 298.7 2.0 173 661-847 3-202 (311)
222 2h8h_A Proto-oncogene tyrosine 100.0 2.3E-32 8E-37 321.4 1.2 238 658-918 264-526 (535)
223 3eb0_A Putative uncharacterize 100.0 7.3E-33 2.5E-37 312.7 -3.1 248 657-915 3-330 (383)
224 2xrw_A Mitogen-activated prote 100.0 9.3E-32 3.2E-36 302.2 5.5 178 660-848 24-226 (371)
225 1cm8_A Phosphorylated MAP kina 100.0 3.9E-32 1.3E-36 304.4 2.2 236 660-908 24-307 (367)
226 3eqc_A Dual specificity mitoge 100.0 1.7E-32 5.7E-37 307.2 -0.9 173 661-848 33-230 (360)
227 2owb_A Serine/threonine-protei 100.0 4.3E-32 1.5E-36 300.6 2.4 225 660-908 40-291 (335)
228 3pfq_A PKC-B, PKC-beta, protei 100.0 1E-31 3.4E-36 323.5 5.6 221 659-903 339-587 (674)
229 3dbq_A Dual specificity protei 100.0 2.4E-32 8.1E-37 303.7 0.0 228 660-908 8-273 (343)
230 3qyz_A Mitogen-activated prote 100.0 4.9E-32 1.7E-36 303.8 2.4 182 660-848 26-232 (364)
231 2buj_A Serine/threonine-protei 100.0 6.9E-32 2.3E-36 296.6 3.5 244 660-914 28-305 (317)
232 3byv_A Rhoptry kinase; malaria 100.0 5.8E-33 2E-37 312.8 -5.3 230 660-917 72-370 (377)
233 3nsz_A CK II alpha, casein kin 100.0 1.2E-31 4E-36 296.5 5.1 175 661-848 36-231 (330)
234 3q60_A ROP5B; pseudokinase, tr 100.0 2E-32 6.7E-37 307.9 -1.2 244 660-917 61-363 (371)
235 3is5_A Calcium-dependent prote 100.0 1.4E-31 4.8E-36 289.4 5.4 225 661-908 22-278 (285)
236 3com_A Serine/threonine-protei 100.0 6.7E-32 2.3E-36 296.3 2.7 229 659-908 27-278 (314)
237 2x7f_A TRAF2 and NCK-interacti 100.0 2.7E-32 9.3E-37 301.1 -0.5 242 650-908 13-286 (326)
238 2ac3_A MAP kinase-interacting 100.0 6.3E-32 2.2E-36 296.7 2.4 240 661-908 12-295 (316)
239 2yfx_A Tyrosine-protein kinase 100.0 1.2E-31 4E-36 296.1 4.6 238 660-918 29-307 (327)
240 3pg1_A Mitogen-activated prote 100.0 7.7E-32 2.6E-36 302.1 3.1 184 653-847 14-233 (362)
241 2y7j_A Phosphorylase B kinase 100.0 1.3E-31 4.6E-36 300.0 4.9 234 654-908 87-359 (365)
242 1vzo_A Ribosomal protein S6 ki 100.0 2.2E-32 7.5E-37 305.3 -1.5 229 660-909 53-322 (355)
243 3ll6_A Cyclin G-associated kin 100.0 4.7E-32 1.6E-36 300.5 1.1 244 659-918 26-311 (337)
244 3mtl_A Cell division protein k 100.0 2.7E-32 9.2E-37 300.7 -1.1 172 661-847 2-200 (324)
245 2zmd_A Dual specificity protei 100.0 5.1E-32 1.7E-36 306.0 1.2 227 661-908 56-320 (390)
246 2clq_A Mitogen-activated prote 100.0 6.8E-32 2.3E-36 293.3 1.4 227 661-908 22-278 (295)
247 3sv0_A Casein kinase I-like; t 100.0 1.8E-31 6E-36 308.0 4.9 246 660-916 6-279 (483)
248 3gbz_A Kinase, CMGC CDK; ssgci 100.0 5.6E-32 1.9E-36 298.8 0.5 175 658-847 31-237 (329)
249 2j7t_A Serine/threonine-protei 100.0 3.5E-32 1.2E-36 296.7 -1.2 228 660-908 18-275 (302)
250 2j0j_A Focal adhesion kinase 1 100.0 2.4E-31 8.1E-36 319.3 5.9 236 659-917 388-653 (656)
251 3lij_A Calcium/calmodulin depe 100.0 4.9E-31 1.7E-35 307.9 8.4 235 660-916 36-301 (494)
252 2jam_A Calcium/calmodulin-depe 100.0 1.1E-31 3.8E-36 293.0 2.6 227 660-908 8-261 (304)
253 2yex_A Serine/threonine-protei 100.0 7.6E-31 2.6E-35 282.1 9.0 230 660-908 6-261 (276)
254 3mwu_A Calmodulin-domain prote 100.0 6E-31 2.1E-35 306.6 8.8 227 660-908 21-276 (486)
255 1ua2_A CAK, cell division prot 100.0 1.4E-31 4.7E-36 297.9 3.2 173 657-844 6-209 (346)
256 4e7w_A Glycogen synthase kinas 100.0 5.7E-32 1.9E-36 306.2 -0.0 238 661-908 40-321 (394)
257 3mi9_A Cell division protein k 100.0 1.3E-31 4.5E-36 298.8 2.9 181 660-846 16-227 (351)
258 2vwi_A Serine/threonine-protei 100.0 1.2E-32 4.1E-37 300.4 -6.0 240 658-908 12-287 (303)
259 2w5a_A Serine/threonine-protei 100.0 1.2E-31 4.1E-36 288.9 1.8 230 660-910 5-269 (279)
260 3a7i_A MST3 kinase, serine/thr 100.0 4.8E-31 1.7E-35 287.8 6.6 226 660-908 21-270 (303)
261 2fst_X Mitogen-activated prote 100.0 8.3E-32 2.8E-36 301.5 0.2 236 660-908 28-311 (367)
262 2z66_A Variable lymphocyte rec 100.0 8E-30 2.7E-34 278.6 16.0 255 56-342 4-262 (306)
263 3rgf_A Cyclin-dependent kinase 100.0 9.4E-32 3.2E-36 306.0 0.6 176 663-848 22-236 (405)
264 1j1b_A Glycogen synthase kinas 100.0 5.4E-32 1.8E-36 308.9 -1.8 237 661-908 54-336 (420)
265 2h6d_A 5'-AMP-activated protei 100.0 3.4E-31 1.2E-35 284.9 4.3 224 660-908 10-261 (276)
266 2ycf_A Serine/threonine-protei 100.0 7.6E-31 2.6E-35 288.9 6.9 228 660-908 9-274 (322)
267 3nyv_A Calmodulin-domain prote 100.0 5.1E-31 1.8E-35 307.2 5.8 227 660-908 25-281 (484)
268 4fcg_A Uncharacterized protein 100.0 3.5E-29 1.2E-33 275.8 20.0 227 327-567 80-315 (328)
269 3g06_A SSPH2 (leucine-rich rep 100.0 1.4E-29 4.9E-34 299.9 18.1 294 45-448 8-307 (622)
270 2z80_A TOLL-like receptor 2, v 100.0 1.2E-29 4E-34 283.2 16.4 273 277-570 35-318 (353)
271 4aaa_A Cyclin-dependent kinase 100.0 5E-32 1.7E-36 299.6 -2.8 175 660-848 24-225 (331)
272 1x8b_A WEE1HU, WEE1-like prote 100.0 2.4E-31 8.4E-36 287.6 2.6 219 660-908 10-279 (289)
273 3q5i_A Protein kinase; CDPK, m 100.0 1.6E-30 5.6E-35 304.2 9.7 228 659-908 34-301 (504)
274 2b9h_A MAP kinase FUS3, mitoge 100.0 3.4E-31 1.2E-35 295.7 3.8 245 660-908 10-305 (353)
275 2wtk_C Serine/threonine-protei 100.0 7.4E-31 2.5E-35 286.6 5.9 228 660-908 4-263 (305)
276 3kvw_A DYRK2, dual specificity 100.0 2.2E-31 7.4E-36 304.6 1.4 169 660-846 96-297 (429)
277 2i6l_A Mitogen-activated prote 100.0 2.7E-31 9.2E-36 292.0 2.1 242 660-908 10-305 (320)
278 1phk_A Phosphorylase kinase; g 100.0 4.5E-31 1.5E-35 287.3 3.7 229 659-908 15-283 (298)
279 4exu_A Mitogen-activated prote 100.0 3.4E-31 1.2E-35 297.6 1.6 236 660-908 41-323 (371)
280 1wak_A Serine/threonine-protei 100.0 3.3E-31 1.1E-35 300.8 1.5 176 660-848 36-293 (397)
281 3e3p_A Protein kinase, putativ 100.0 3.7E-31 1.3E-35 296.2 1.9 185 653-848 15-232 (360)
282 1blx_A Cyclin-dependent kinase 100.0 3.5E-31 1.2E-35 292.1 1.5 238 658-908 8-296 (326)
283 2r3i_A Cell division protein k 100.0 5.2E-31 1.8E-35 286.9 2.5 173 661-848 3-204 (299)
284 2z66_A Variable lymphocyte rec 100.0 2.5E-29 8.6E-34 274.7 15.5 210 324-543 48-262 (306)
285 3zyj_A Leucine-rich repeat-con 100.0 1.4E-28 4.9E-33 282.9 22.5 250 329-591 44-294 (440)
286 3zyi_A Leucine-rich repeat-con 100.0 1.5E-28 5.1E-33 283.8 22.3 250 329-591 55-305 (452)
287 3fme_A Dual specificity mitoge 100.0 1.7E-31 5.8E-36 289.4 -2.3 227 660-908 6-266 (290)
288 3ogk_B Coronatine-insensitive 100.0 6E-32 2E-36 323.8 -7.0 419 111-568 65-528 (592)
289 1wwl_A Monocyte differentiatio 100.0 5.2E-30 1.8E-34 280.7 8.8 226 330-568 65-311 (312)
290 3an0_A Dual specificity mitoge 100.0 4E-31 1.4E-35 293.6 -0.6 228 659-908 49-310 (340)
291 2pml_X PFPK7, Ser/Thr protein 100.0 4.2E-30 1.4E-34 286.3 7.6 227 660-908 30-322 (348)
292 3fhr_A MAP kinase-activated pr 100.0 6.8E-31 2.3E-35 290.9 0.9 234 660-908 27-287 (336)
293 1ozn_A Reticulon 4 receptor; N 100.0 4.5E-29 1.5E-33 269.7 15.0 251 331-593 14-265 (285)
294 2rio_A Serine/threonine-protei 100.0 5.1E-30 1.7E-34 293.9 7.9 231 662-908 16-295 (434)
295 3p23_A Serine/threonine-protei 100.0 9.4E-31 3.2E-35 299.1 1.7 230 660-908 23-283 (432)
296 3coi_A Mitogen-activated prote 100.0 1.2E-30 4E-35 291.4 2.1 236 660-908 23-305 (353)
297 3zyi_A Leucine-rich repeat-con 100.0 3.5E-28 1.2E-32 280.7 22.8 231 328-569 75-306 (452)
298 1z57_A Dual specificity protei 100.0 1.5E-30 5E-35 288.6 2.2 170 660-847 13-233 (339)
299 1q8y_A SR protein kinase; tran 100.0 7.5E-31 2.6E-35 295.3 -0.3 176 660-848 18-235 (373)
300 2vx3_A Dual specificity tyrosi 100.0 4.5E-31 1.6E-35 297.9 -2.7 179 654-848 47-258 (382)
301 3zyj_A Leucine-rich repeat-con 100.0 5.9E-28 2E-32 277.8 21.7 230 328-568 64-294 (440)
302 2wei_A Calmodulin-domain prote 100.0 1.1E-29 3.8E-34 274.8 6.6 227 660-908 21-276 (287)
303 3cek_A Dual specificity protei 100.0 7.9E-31 2.7E-35 287.6 -3.0 237 651-908 18-292 (313)
304 3qa8_A MGC80376 protein; kinas 100.0 5.7E-30 1.9E-34 301.4 4.0 238 660-907 13-296 (676)
305 2eu9_A Dual specificity protei 100.0 4.7E-30 1.6E-34 286.5 2.0 171 660-848 18-239 (355)
306 1wwl_A Monocyte differentiatio 100.0 9.5E-30 3.2E-34 278.6 4.4 250 324-589 39-309 (312)
307 2pzi_A Probable serine/threoni 100.0 7.7E-30 2.6E-34 309.3 2.8 227 660-917 79-330 (681)
308 3aln_A Dual specificity mitoge 100.0 1.7E-30 5.8E-35 286.8 -2.7 229 660-908 21-285 (327)
309 1ozn_A Reticulon 4 receptor; N 100.0 4.9E-28 1.7E-32 261.5 16.4 235 328-572 32-267 (285)
310 3a99_A Proto-oncogene serine/t 100.0 1.9E-30 6.5E-35 285.4 -3.2 220 657-908 39-293 (320)
311 2iwi_A Serine/threonine-protei 100.0 4.5E-30 1.6E-34 281.4 -0.8 222 655-908 25-283 (312)
312 2dyl_A Dual specificity mitoge 99.9 2.4E-29 8.4E-34 276.2 2.5 228 660-908 24-283 (318)
313 3o53_A Protein LRIM1, AGAP0063 99.9 7.5E-29 2.6E-33 272.1 5.8 270 71-371 10-281 (317)
314 3o53_A Protein LRIM1, AGAP0063 99.9 4.9E-29 1.7E-33 273.6 3.8 246 248-547 33-281 (317)
315 2vuw_A Serine/threonine-protei 99.9 4.6E-29 1.6E-33 276.4 2.8 161 660-835 19-263 (336)
316 3uqc_A Probable conserved tran 99.9 2.5E-29 8.7E-34 271.4 0.5 213 661-919 31-269 (286)
317 2o6q_A Variable lymphocyte rec 99.9 1.3E-26 4.6E-31 248.0 20.7 217 56-286 2-218 (270)
318 3g06_A SSPH2 (leucine-rich rep 99.9 2.6E-26 8.9E-31 272.0 24.0 267 201-552 41-307 (622)
319 3oja_A Leucine-rich immune mol 99.9 5.8E-28 2E-32 280.6 9.2 237 271-561 32-270 (487)
320 3dzo_A Rhoptry kinase domain; 99.9 3.2E-29 1.1E-33 285.3 -1.8 222 659-908 76-363 (413)
321 2p1m_B Transport inhibitor res 99.9 1.7E-30 5.7E-35 311.4 -15.0 459 57-564 33-542 (594)
322 2z62_A TOLL-like receptor 4, v 99.9 3.3E-26 1.1E-30 245.9 18.6 228 332-571 11-242 (276)
323 3m2w_A MAP kinase-activated pr 99.9 7E-28 2.4E-32 262.2 0.7 214 660-908 16-256 (299)
324 2p1m_B Transport inhibitor res 99.9 9.2E-29 3.2E-33 296.2 -12.4 422 98-567 46-520 (594)
325 2o6q_A Variable lymphocyte rec 99.9 2.1E-24 7.1E-29 231.0 21.3 202 329-566 17-218 (270)
326 2z62_A TOLL-like receptor 4, v 99.9 1E-24 3.4E-29 234.3 17.6 209 328-546 28-241 (276)
327 4azs_A Methyltransferase WBDD; 99.9 2.4E-26 8.3E-31 270.6 4.5 142 686-842 285-432 (569)
328 1p9a_G Platelet glycoprotein I 99.9 1.8E-24 6.1E-29 233.7 18.0 205 373-591 6-210 (290)
329 3rfs_A Internalin B, repeat mo 99.9 4E-25 1.4E-29 236.7 12.5 186 325-552 60-245 (272)
330 3rfs_A Internalin B, repeat mo 99.9 3.3E-25 1.1E-29 237.4 10.6 200 354-572 42-241 (272)
331 4glp_A Monocyte differentiatio 99.9 3.3E-24 1.1E-28 234.4 17.2 228 328-567 64-308 (310)
332 2xwt_C Thyrotropin receptor; s 99.9 3.7E-24 1.3E-28 224.7 16.8 186 86-287 25-219 (239)
333 1p9a_G Platelet glycoprotein I 99.9 1E-23 3.5E-28 227.7 18.0 205 323-567 5-209 (290)
334 3m19_A Variable lymphocyte rec 99.9 9.5E-24 3.2E-28 223.2 17.4 191 57-263 3-193 (251)
335 2xwt_C Thyrotropin receptor; s 99.9 3.2E-23 1.1E-27 217.5 15.5 196 354-563 32-236 (239)
336 3goz_A Leucine-rich repeat-con 99.9 7.2E-25 2.5E-29 245.1 2.6 234 277-517 2-265 (362)
337 3goz_A Leucine-rich repeat-con 99.9 2.3E-25 7.8E-30 249.2 -2.7 37 201-237 23-64 (362)
338 2ca6_A RAN GTPase-activating p 99.9 4.2E-25 1.4E-29 249.5 -1.7 240 324-567 28-317 (386)
339 3m19_A Variable lymphocyte rec 99.9 1.7E-22 5.9E-27 213.6 18.3 179 354-543 15-193 (251)
340 2ast_B S-phase kinase-associat 99.9 7E-25 2.4E-29 242.7 -0.3 271 56-375 34-315 (336)
341 4ay9_X Follicle-stimulating ho 99.9 1.8E-22 6E-27 224.6 18.0 244 58-338 8-256 (350)
342 2ca6_A RAN GTPase-activating p 99.9 9.8E-25 3.3E-29 246.5 -0.3 249 265-546 24-320 (386)
343 2o6s_A Variable lymphocyte rec 99.9 2E-22 6.8E-27 206.5 15.8 188 55-274 3-190 (208)
344 4glp_A Monocyte differentiatio 99.9 4.5E-23 1.5E-27 225.3 11.5 225 354-589 65-307 (310)
345 3cvr_A Invasion plasmid antige 99.9 2.5E-23 8.7E-28 243.3 10.1 207 49-295 33-252 (571)
346 3en9_A Glycoprotease, O-sialog 99.9 3.1E-24 1E-28 251.3 0.6 161 664-834 339-524 (540)
347 2ast_B S-phase kinase-associat 99.9 7.6E-24 2.6E-28 234.4 3.3 232 328-572 70-312 (336)
348 1h6u_A Internalin H; cell adhe 99.9 2E-22 6.9E-27 219.7 13.2 189 355-567 43-231 (308)
349 1h6u_A Internalin H; cell adhe 99.9 7.2E-22 2.4E-26 215.4 17.2 199 323-547 36-234 (308)
350 4ay9_X Follicle-stimulating ho 99.9 2.3E-21 8E-26 215.5 18.0 105 200-304 30-135 (350)
351 2o6s_A Variable lymphocyte rec 99.9 4.1E-21 1.4E-25 196.7 15.2 181 331-530 10-190 (208)
352 3e6j_A Variable lymphocyte rec 99.8 1.1E-20 3.6E-25 196.7 15.9 165 51-240 11-175 (229)
353 3cvr_A Invasion plasmid antige 99.8 1.1E-20 3.7E-25 221.1 16.5 188 329-553 60-254 (571)
354 4b8c_D Glucose-repressible alc 99.8 1.3E-21 4.4E-26 237.5 4.5 231 25-283 129-369 (727)
355 2v9t_B SLIT homolog 2 protein 99.8 7.3E-20 2.5E-24 189.0 14.5 159 55-237 7-165 (220)
356 2v70_A SLIT-2, SLIT homolog 2 99.8 4.6E-20 1.6E-24 190.5 10.2 136 427-570 34-170 (220)
357 2xot_A Amphoterin-induced prot 99.8 9.3E-20 3.2E-24 203.4 11.4 74 480-553 111-187 (361)
358 1h6t_A Internalin B; cell adhe 99.8 2.9E-19 9.8E-24 193.0 14.5 168 354-567 47-214 (291)
359 2v9t_B SLIT homolog 2 protein 99.8 3.5E-19 1.2E-23 183.9 14.4 153 380-567 14-166 (220)
360 1h6t_A Internalin B; cell adhe 99.8 2.4E-19 8.1E-24 193.6 13.7 145 298-462 25-169 (291)
361 2v70_A SLIT-2, SLIT homolog 2 99.8 3.4E-19 1.2E-23 184.0 13.8 155 381-546 15-170 (220)
362 2xot_A Amphoterin-induced prot 99.8 2.6E-19 8.9E-24 199.8 13.8 179 331-518 21-202 (361)
363 1m9s_A Internalin B; cell inva 99.8 1.7E-19 5.8E-24 213.4 12.2 190 275-496 23-212 (605)
364 1dce_A Protein (RAB geranylger 99.8 7.7E-22 2.6E-26 232.2 -9.2 206 324-572 345-552 (567)
365 1m9s_A Internalin B; cell inva 99.8 6.6E-19 2.3E-23 208.4 14.6 169 354-544 44-212 (605)
366 4b8c_D Glucose-repressible alc 99.8 9.1E-20 3.1E-24 221.3 5.7 191 359-568 207-406 (727)
367 1zar_A RIO2 kinase; serine kin 99.8 1.3E-19 4.5E-24 194.2 5.8 136 654-822 83-253 (282)
368 3e6j_A Variable lymphocyte rec 99.8 3.2E-18 1.1E-22 177.8 15.2 153 355-543 21-173 (229)
369 1dce_A Protein (RAB geranylger 99.8 5.7E-21 1.9E-25 224.8 -6.8 170 265-464 364-548 (567)
370 1xeu_A Internalin C; cellular 99.7 7.6E-19 2.6E-23 186.6 7.7 167 354-543 20-186 (263)
371 4ezg_A Putative uncharacterize 99.7 8E-18 2.7E-22 170.5 13.5 154 374-542 41-194 (197)
372 1xeu_A Internalin C; cellular 99.7 1.2E-18 4.1E-23 185.1 6.3 182 185-440 6-187 (263)
373 1w8a_A SLIT protein; signaling 99.7 1E-17 3.5E-22 168.9 10.9 155 426-592 30-186 (192)
374 1w8a_A SLIT protein; signaling 99.7 4E-18 1.4E-22 171.9 7.9 156 428-593 11-166 (192)
375 4ezg_A Putative uncharacterize 99.7 2.9E-17 1E-21 166.4 13.1 150 354-519 45-195 (197)
376 3sb4_A Hypothetical leucine ri 99.7 1.5E-17 5.2E-22 183.0 9.3 125 328-455 202-327 (329)
377 3sb4_A Hypothetical leucine ri 99.7 5.2E-18 1.8E-22 186.8 3.2 294 85-408 13-328 (329)
378 2ell_A Acidic leucine-rich nuc 99.6 2.8E-16 9.7E-21 154.7 10.7 85 482-566 72-160 (168)
379 2ell_A Acidic leucine-rich nuc 99.6 6.9E-16 2.4E-20 151.9 12.4 132 328-462 24-160 (168)
380 2o6r_A Variable lymphocyte rec 99.6 1E-15 3.5E-20 152.1 13.2 109 56-180 4-112 (177)
381 2wfh_A SLIT homolog 2 protein 99.6 1E-15 3.6E-20 154.1 13.1 128 428-567 13-140 (193)
382 2je0_A Acidic leucine-rich nuc 99.6 4.3E-16 1.5E-20 150.0 8.3 81 481-561 64-148 (149)
383 2je0_A Acidic leucine-rich nuc 99.6 4.7E-16 1.6E-20 149.7 8.3 130 399-538 15-149 (149)
384 2wfh_A SLIT homolog 2 protein 99.6 2E-15 7E-20 152.0 13.2 125 76-237 15-139 (193)
385 4fdw_A Leucine rich hypothetic 99.6 1.4E-14 4.7E-19 162.9 19.5 129 354-493 249-382 (401)
386 4fdw_A Leucine rich hypothetic 99.6 2.5E-14 8.4E-19 160.9 20.4 266 94-390 112-383 (401)
387 2o6r_A Variable lymphocyte rec 99.6 3.9E-15 1.3E-19 147.8 12.3 131 330-464 9-139 (177)
388 1ds9_A Outer arm dynein; leuci 99.6 5E-17 1.7E-21 164.8 -5.2 132 420-566 43-185 (198)
389 4fs7_A Uncharacterized protein 99.5 2.1E-13 7.3E-18 153.8 22.1 311 90-459 66-376 (394)
390 1a9n_A U2A', U2A'; complex (nu 99.5 3.3E-15 1.1E-19 148.3 6.0 136 89-237 13-153 (176)
391 1ds9_A Outer arm dynein; leuci 99.5 7.5E-17 2.6E-21 163.5 -6.4 157 354-543 19-186 (198)
392 1zth_A RIO1 serine protein kin 99.5 3.6E-15 1.2E-19 157.7 6.2 116 663-792 49-219 (258)
393 1a9n_A U2A', U2A'; complex (nu 99.5 1.6E-14 5.5E-19 143.2 9.0 134 323-462 14-153 (176)
394 4fs7_A Uncharacterized protein 99.5 3.6E-13 1.2E-17 151.9 18.9 315 190-562 61-375 (394)
395 3g39_A Variable lymphocyte rec 99.5 2E-13 6.7E-18 134.4 11.9 104 75-182 13-116 (170)
396 3g39_A Variable lymphocyte rec 99.5 1.3E-13 4.4E-18 135.7 10.2 109 451-570 11-119 (170)
397 2r9u_A Variable lymphocyte rec 99.4 3.1E-13 1.1E-17 133.5 11.9 103 75-181 16-118 (174)
398 2r9u_A Variable lymphocyte rec 99.4 2.6E-13 8.8E-18 134.0 10.3 106 452-568 15-120 (174)
399 4gyi_A RIO2 kinase; protein ki 99.4 1.1E-13 3.8E-18 151.7 4.6 134 655-791 89-264 (397)
400 2ifg_A High affinity nerve gro 99.3 1.9E-12 6.3E-17 143.4 10.5 109 58-181 7-116 (347)
401 3un9_A NLR family member X1; l 99.3 2.3E-14 7.9E-19 159.5 -7.0 13 354-366 73-85 (372)
402 4gt6_A Cell surface protein; l 99.3 3.5E-10 1.2E-14 127.3 26.8 329 90-461 58-390 (394)
403 4gt6_A Cell surface protein; l 99.3 1.2E-10 4.1E-15 131.2 21.4 334 110-518 54-391 (394)
404 3un9_A NLR family member X1; l 99.3 2.6E-13 8.9E-18 151.0 -1.7 87 481-567 155-253 (372)
405 2ifg_A High affinity nerve gro 99.2 2.4E-11 8.1E-16 134.4 10.1 106 452-568 11-118 (347)
406 4h09_A Hypothetical leucine ri 99.0 1.9E-08 6.6E-13 112.4 22.6 128 91-235 42-169 (379)
407 4h09_A Hypothetical leucine ri 99.0 1.5E-08 5.2E-13 113.2 20.0 132 395-538 211-342 (379)
408 2ra8_A Uncharacterized protein 98.9 2.4E-10 8.2E-15 126.0 0.6 161 72-238 108-293 (362)
409 2ra8_A Uncharacterized protein 98.8 4.9E-10 1.7E-14 123.5 1.3 64 480-543 251-321 (362)
410 3rw6_A Nuclear RNA export fact 98.8 3.4E-11 1.2E-15 125.9 -8.1 162 58-230 77-257 (267)
411 3tm0_A Aminoglycoside 3'-phosp 98.8 4.7E-09 1.6E-13 110.9 6.4 132 655-791 8-213 (263)
412 1nd4_A Aminoglycoside 3'-phosp 98.6 2E-08 6.8E-13 105.8 4.9 127 659-791 18-214 (264)
413 3rw6_A Nuclear RNA export fact 98.5 2.5E-08 8.5E-13 104.2 2.3 108 445-559 137-257 (267)
414 1io0_A Tropomodulin; LRR prote 98.4 3.6E-08 1.2E-12 97.9 -0.7 42 525-566 117-164 (185)
415 1io0_A Tropomodulin; LRR prote 98.3 5.2E-08 1.8E-12 96.7 -0.2 122 417-542 28-164 (185)
416 3dxp_A Putative acyl-COA dehyd 98.2 9.7E-07 3.3E-11 97.7 6.8 124 666-791 43-248 (359)
417 3sg8_A APH(2'')-ID; antibiotic 97.8 2.4E-05 8.3E-10 84.1 7.2 124 666-791 25-223 (304)
418 3r70_A Aminoglycoside phosphot 97.7 6.1E-05 2.1E-09 81.6 7.9 121 662-791 38-237 (320)
419 3ovc_A Hygromycin-B 4-O-kinase 97.5 0.00039 1.3E-08 76.5 11.0 125 664-792 44-244 (362)
420 3e4g_A ATP synthase subunit S, 97.4 5.9E-05 2E-09 72.9 3.2 34 378-411 62-95 (176)
421 3d1u_A Putative fructosamine-3 97.4 0.00028 9.5E-09 74.9 7.9 62 665-735 19-98 (288)
422 3e4g_A ATP synthase subunit S, 97.4 4.9E-05 1.7E-09 73.5 1.7 83 354-436 62-150 (176)
423 3tdw_A Gentamicin resistance p 97.2 0.00038 1.3E-08 74.7 7.2 122 666-791 24-224 (306)
424 4gkh_A Aminoglycoside 3'-phosp 96.9 0.00086 2.9E-08 70.4 5.9 101 686-791 63-223 (272)
425 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00033 1.1E-08 69.0 0.9 62 504-565 97-169 (197)
426 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00041 1.4E-08 68.3 1.3 16 527-542 96-111 (197)
427 3rfe_A Platelet glycoprotein I 96.6 0.0029 9.8E-08 58.1 6.2 34 121-154 33-66 (130)
428 3rfe_A Platelet glycoprotein I 96.6 0.003 1E-07 58.0 6.3 35 530-564 32-66 (130)
429 2q83_A YTAA protein; 2635576, 96.5 0.0026 9E-08 69.1 6.7 32 760-791 221-252 (346)
430 3ats_A Putative uncharacterize 96.4 0.002 6.9E-08 70.6 4.6 32 760-791 221-252 (357)
431 3jr1_A Putative fructosamine-3 96.3 0.0087 3E-07 64.0 8.8 64 666-734 41-118 (312)
432 2olc_A MTR kinase, methylthior 96.1 0.0088 3E-07 66.6 8.1 31 761-792 227-257 (397)
433 2ppq_A HSK, HK, homoserine kin 95.8 0.018 6.1E-07 61.9 8.5 141 650-791 6-217 (322)
434 3f7w_A Putative fructosamine-3 95.2 0.032 1.1E-06 58.8 7.7 63 664-735 18-98 (288)
435 2pyw_A Uncharacterized protein 94.9 0.034 1.2E-06 62.3 7.2 32 760-792 231-262 (420)
436 3dxq_A Choline/ethanolamine ki 94.8 0.028 9.5E-07 59.8 5.9 118 666-791 23-202 (301)
437 1zyl_A Hypothetical protein YI 94.0 0.11 3.7E-06 55.8 8.4 30 760-791 194-223 (328)
438 1nw1_A Choline kinase (49.2 KD 93.9 0.047 1.6E-06 61.3 5.3 39 687-734 120-159 (429)
439 3feg_A Choline/ethanolamine ki 93.4 0.11 3.7E-06 57.0 7.1 31 761-791 220-254 (379)
440 3csv_A Aminoglycoside phosphot 92.4 0.17 5.7E-06 54.5 6.8 32 760-791 182-217 (333)
441 2qg7_A Ethanolamine kinase PV0 91.8 0.21 7.1E-06 56.3 6.9 36 690-734 152-188 (458)
442 3c5i_A Choline kinase; choline 91.5 0.13 4.4E-06 56.3 4.7 30 761-791 212-241 (369)
443 2ks1_B Epidermal growth factor 89.2 0.52 1.8E-05 33.3 4.4 29 608-636 13-41 (44)
444 3f2s_A CK, chetk-alpha, cholin 88.8 0.41 1.4E-05 52.7 5.7 31 761-791 244-280 (401)
445 3mes_A Choline kinase; malaria 82.6 0.65 2.2E-05 51.6 3.3 30 761-791 262-291 (424)
446 2l2t_A Receptor tyrosine-prote 80.7 1.2 4.2E-05 31.4 2.9 13 624-636 28-40 (44)
447 3g15_A CK, chetk-alpha, cholin 71.8 3.7 0.00013 45.1 5.5 29 763-791 246-280 (401)
448 2jwa_A Receptor tyrosine-prote 67.9 4.8 0.00017 28.3 3.3 18 619-636 24-41 (44)
449 3i1a_A Spectinomycin phosphotr 62.6 2.4 8.1E-05 45.5 1.5 31 761-791 206-236 (339)
450 2lz0_A Uncharacterized protein 49.7 29 0.001 29.3 5.9 16 159-174 11-26 (100)
451 2lz0_A Uncharacterized protein 37.4 39 0.0013 28.6 4.8 46 188-234 8-53 (100)
452 3cxl_A N-chimerin; SH2, RHO-GA 33.3 8.8 0.0003 43.0 -0.1 44 666-712 147-214 (463)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=6.7e-80 Score=759.83 Aligned_cols=563 Identities=33% Similarity=0.517 Sum_probs=430.9
Q ss_pred CCCcCChhhHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcceeeCCCCCcEEEEEcCCCCCccc---cC---------
Q 002376 21 SASVGINTDKEALMSFKSQISQESPSSPLSYWNPSSSPCTWPGVICNNFGNRVIGLNLSSFGLEGT---IS--------- 88 (929)
Q Consensus 21 ~~~~~~~~~~~aLl~~k~~~~~~~~~~~l~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~---i~--------- 88 (929)
+++++.++||+|||+||+++. | |. .+++|+.+.+||+|.||+|+ ++||+.|||+++++.|. +|
T Consensus 5 ~~~~~~~~~~~all~~k~~~~-~-~~-~l~~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L 79 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLP-D-KN-LLPDWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGL 79 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCS-C-TT-SSTTCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTC
T ss_pred ccccCCHHHHHHHHHHHhhCC-C-cc-cccCCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcc
Confidence 345557899999999999997 3 56 89999988899999999999 57999999999999987 44
Q ss_pred --------------CCCCCCCCCCEEEeecCCCCCCCCc--CCCCCCCCcEEeCCCCCCCCCccccc-ccccccceeccc
Q 002376 89 --------------PHIGNLSFLRSIQLQNNKLSGNLPR--EIGNLFRLRVLNISFNNLQGELPVNI-SKLTELKMLDLM 151 (929)
Q Consensus 89 --------------~~l~~L~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls 151 (929)
+.|+.+++|++|||++|.++|.+|. .++++++|++|||++|.+++.+|..+ .++++|++|||+
T Consensus 80 ~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls 159 (768)
T 3rgz_A 80 ESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 159 (768)
T ss_dssp CEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECC
T ss_pred cccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECC
Confidence 5777888889999999888888877 77777777777777777766665543 333333333333
Q ss_pred ccccC-------------------------------------------------CCCChhhhccCCCCcEEEccccccCC
Q 002376 152 ANKIT-------------------------------------------------GRVTDDQLRNLRSLQVLNFGKNLLWG 182 (929)
Q Consensus 152 ~N~l~-------------------------------------------------~~i~~~~~~~l~~L~~L~Ls~N~l~~ 182 (929)
+|+++ +.+|. ++++++|++|+|++|++++
T Consensus 160 ~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--l~~l~~L~~L~Ls~n~l~~ 237 (768)
T 3rgz_A 160 ANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF--LGDCSALQHLDISGNKLSG 237 (768)
T ss_dssp SSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB--CTTCCSCCEEECCSSCCCS
T ss_pred CCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc--cccCCCCCEEECcCCcCCC
Confidence 33333 22221 3334444444444444433
Q ss_pred CCCccccc--------------------------------------cCCCccCCC-CcccEEEeecccCCCccCCccccC
Q 002376 183 SIPPSIAN--------------------------------------LIPSDLSRL-ENLKVLDLTINRLAGTVPSTIYNM 223 (929)
Q Consensus 183 ~~p~~i~~--------------------------------------l~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l 223 (929)
.+|..+.. .+|..+..+ ++|++|+|++|++++..|..|.++
T Consensus 238 ~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l 317 (768)
T 3rgz_A 238 DFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC 317 (768)
T ss_dssp CHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGC
T ss_pred cccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcC
Confidence 33322211 122333222 444444444444444444445555
Q ss_pred CCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccc-cccEEeccCccCcCCccCCCCC--CCccc
Q 002376 224 TSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLT-NIQIIRMTHNLLEGTLPPGLGN--LPFLR 300 (929)
Q Consensus 224 ~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~--l~~L~ 300 (929)
++|++|+|++|+++|.+|...+..+++|++|++++|++++.+|..+.++. +|+.|++++|.+++.+|..+.. +++|+
T Consensus 318 ~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~ 397 (768)
T 3rgz_A 318 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQ 397 (768)
T ss_dssp TTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCC
T ss_pred CCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCcc
Confidence 55555555555554445544333355555555555555555555555554 5555555555555555555444 55555
Q ss_pred eeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCccc
Q 002376 301 TYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLT 380 (929)
Q Consensus 301 ~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 380 (929)
+|++++|++... .+..+.++++|++|+|++|++++.+|..++.++ +|+.|+|++|++++.+|..++.+++|+
T Consensus 398 ~L~L~~n~l~~~-------~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~ 469 (768)
T 3rgz_A 398 ELYLQNNGFTGK-------IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS-KLRDLKLWLNMLEGEIPQELMYVKTLE 469 (768)
T ss_dssp EEECCSSEEEEE-------CCGGGGGCTTCCEEECCSSEEESCCCGGGGGCT-TCCEEECCSSCCCSCCCGGGGGCTTCC
T ss_pred EEECCCCccccc-------cCHHHhcCCCCCEEECcCCcccCcccHHHhcCC-CCCEEECCCCcccCcCCHHHcCCCCce
Confidence 555555555432 235688899999999999999999999999987 799999999999999999999999999
Q ss_pred EEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCc
Q 002376 381 LLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNR 460 (929)
Q Consensus 381 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 460 (929)
+|+|++|++++.+|..+..+++|++|+|++|++++.+|.+++.+++|++|+|++|+++|.+|..+.++++|+.|++++|+
T Consensus 470 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 549 (768)
T 3rgz_A 470 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNL 549 (768)
T ss_dssp EEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSE
T ss_pred EEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccc--------------------------------------------------------------CCchhhh
Q 002376 461 INGNIPKGILR--------------------------------------------------------------PLPEEIS 478 (929)
Q Consensus 461 l~g~i~~~~~~--------------------------------------------------------------~~p~~~~ 478 (929)
++|.+|..++. ..|..+.
T Consensus 550 l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~ 629 (768)
T 3rgz_A 550 FNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFD 629 (768)
T ss_dssp EESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCS
T ss_pred cCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhh
Confidence 99999875432 1234556
Q ss_pred cccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeE
Q 002376 479 RLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSL 558 (929)
Q Consensus 479 ~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 558 (929)
.+++|+.|||++|+++|.+|..|+++++|+.|+|++|+++|.+|..|+.+++|++||||+|+++|.+|..+.++++|++|
T Consensus 630 ~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L 709 (768)
T 3rgz_A 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI 709 (768)
T ss_dssp SSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEE
T ss_pred ccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEE
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCcCcccCCCCCCCCCCCcccccCCCCCcCCC--CCCCC
Q 002376 559 NLTFNNLEGVVPSEGIFRNMSNVHLKGNPKLCLQL--GCENP 598 (929)
Q Consensus 559 ~Ls~N~l~~~~p~~~~~~~l~~l~l~~N~~~c~~~--~c~~~ 598 (929)
||++|+++|.+|..++|.++....+.|||++||.| .|...
T Consensus 710 ~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~~ 751 (768)
T 3rgz_A 710 DLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPS 751 (768)
T ss_dssp ECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCSC
T ss_pred ECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCCC
Confidence 99999999999999999999999999999999987 78643
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.6e-60 Score=585.32 Aligned_cols=473 Identities=30% Similarity=0.493 Sum_probs=380.0
Q ss_pred cEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceeccc
Q 002376 72 RVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLM 151 (929)
Q Consensus 72 ~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 151 (929)
+++.|++++|.++|.+|. ..+++|++|+|++|++++.+|. ++++++|++|+|++|++++.+|..|.++++|++|+|+
T Consensus 179 ~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls 255 (768)
T 3rgz_A 179 ELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNIS 255 (768)
T ss_dssp TCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECC
T ss_pred CCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECC
Confidence 566666666666655443 5666666666666666666655 6666666666666666666666666666666666666
Q ss_pred ccccCCCCChhhhccCCCCcEEEccccccCCCCCccccc-----------------cCCCccCCCCcccEEEeecccCCC
Q 002376 152 ANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIAN-----------------LIPSDLSRLENLKVLDLTINRLAG 214 (929)
Q Consensus 152 ~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~-----------------l~p~~~~~l~~L~~L~Ls~N~l~~ 214 (929)
+|++++.+|.. .+++|++|+|++|+++|.+|..+.. ..|..|+.+++|++|+|++|++++
T Consensus 256 ~n~l~~~~~~~---~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 332 (768)
T 3rgz_A 256 SNQFVGPIPPL---PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSG 332 (768)
T ss_dssp SSCCEESCCCC---CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEE
T ss_pred CCcccCccCcc---ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccC
Confidence 66666544432 5566666666666666555544322 256677888999999999999988
Q ss_pred ccCCc-cccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccc--cccccEEeccCccCcCCccC
Q 002376 215 TVPST-IYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHN--LTNIQIIRMTHNLLEGTLPP 291 (929)
Q Consensus 215 ~~p~~-~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~--l~~L~~L~Ls~N~l~~~~p~ 291 (929)
.+|.. |.++++|++|+|++|+++|.+|..+....++|+.|++++|++++.+|..+.. +++|+.|++++|.+++.+|.
T Consensus 333 ~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~ 412 (768)
T 3rgz_A 333 ELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPP 412 (768)
T ss_dssp ECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCG
T ss_pred cCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCH
Confidence 77765 8889999999999999988888888773348899999999988888888877 78889999999998888888
Q ss_pred CCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCC
Q 002376 292 GLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPA 371 (929)
Q Consensus 292 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~ 371 (929)
.|.++++|++|++++|++..... ..+.++++|++|+|++|++++.+|..+..+. +|++|+|++|++++.+|.
T Consensus 413 ~l~~l~~L~~L~Ls~N~l~~~~p-------~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~ 484 (768)
T 3rgz_A 413 TLSNCSELVSLHLSFNYLSGTIP-------SSLGSLSKLRDLKLWLNMLEGEIPQELMYVK-TLETLILDFNDLTGEIPS 484 (768)
T ss_dssp GGGGCTTCCEEECCSSEEESCCC-------GGGGGCTTCCEEECCSSCCCSCCCGGGGGCT-TCCEEECCSSCCCSCCCG
T ss_pred HHhcCCCCCEEECcCCcccCccc-------HHHhcCCCCCEEECCCCcccCcCCHHHcCCC-CceEEEecCCcccCcCCH
Confidence 88888999999999888875432 4677888888888888888888888888876 788888888888888888
Q ss_pred CCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcc-------
Q 002376 372 SIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPIS------- 444 (929)
Q Consensus 372 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~------- 444 (929)
.++++++|++|+|++|++++.+|.+++.+++|++|+|++|++++.+|..+.++++|++|||++|+++|.+|..
T Consensus 485 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~ 564 (768)
T 3rgz_A 485 GLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK 564 (768)
T ss_dssp GGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTC
T ss_pred HHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccch
Confidence 8888888888888888888888888888888888888888888888888888888888888888888776654
Q ss_pred ---------------------------------------------------------------cccccccceecccCCcC
Q 002376 445 ---------------------------------------------------------------FGNFQSLLSIDLSNNRI 461 (929)
Q Consensus 445 ---------------------------------------------------------------~~~l~~L~~L~Ls~N~l 461 (929)
|.++++|+.|||++|++
T Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l 644 (768)
T 3rgz_A 565 IAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNML 644 (768)
T ss_dssp BCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCC
T ss_pred hhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcc
Confidence 34467899999999999
Q ss_pred CCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcC
Q 002376 462 NGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKL 541 (929)
Q Consensus 462 ~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 541 (929)
+|.+ |.+++.+++|+.|||++|+++|.+|..|+++++|+.|||++|+++|.+|..++.+++|++||||+|++
T Consensus 645 ~g~i--------p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l 716 (768)
T 3rgz_A 645 SGYI--------PKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 716 (768)
T ss_dssp BSCC--------CGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEE
T ss_pred cccC--------CHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcc
Confidence 9887 78899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCcccccCCCCCeEeCCCCc-Ccc
Q 002376 542 SGSIPSDLQNLQALRSLNLTFNN-LEG 567 (929)
Q Consensus 542 ~~~~p~~~~~l~~L~~L~Ls~N~-l~~ 567 (929)
+|.+|.. ..+..+....+.+|. +.|
T Consensus 717 ~g~iP~~-~~~~~~~~~~~~gN~~Lcg 742 (768)
T 3rgz_A 717 SGPIPEM-GQFETFPPAKFLNNPGLCG 742 (768)
T ss_dssp EEECCSS-SSGGGSCGGGGCSCTEEES
T ss_pred cccCCCc-hhhccCCHHHhcCCchhcC
Confidence 9999974 344555666677775 554
No 3
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.3e-60 Score=569.46 Aligned_cols=499 Identities=23% Similarity=0.310 Sum_probs=295.8
Q ss_pred CCcCChhhHHHHHHHHhhcCCCC------CCCCCCCCCCCCCCCCC---cceeeCCCCCcEEEEEcCCCCCccccCCCCC
Q 002376 22 ASVGINTDKEALMSFKSQISQES------PSSPLSYWNPSSSPCTW---PGVICNNFGNRVIGLNLSSFGLEGTISPHIG 92 (929)
Q Consensus 22 ~~~~~~~~~~aLl~~k~~~~~~~------~~~~l~~w~~~~~~c~w---~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~ 92 (929)
+++...+|++||.+||.++..+. +....++|+.+.+||.| .||+|+.. +||+.|+|++++++|.+|++|+
T Consensus 24 ~~~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~ 102 (636)
T 4eco_A 24 RTAEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIG 102 (636)
T ss_dssp CCCHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGG
T ss_pred hhhhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHh
Confidence 33444689999999999986541 22345689999999999 99999876 6999999999999999999999
Q ss_pred CCCCCCEEEeecCCC------CC------CCCcCCCCCCCCcEEeCCCCCCCCCcccccccc-cccceecccccccCCCC
Q 002376 93 NLSFLRSIQLQNNKL------SG------NLPREIGNLFRLRVLNISFNNLQGELPVNISKL-TELKMLDLMANKITGRV 159 (929)
Q Consensus 93 ~L~~L~~L~Ls~N~l------~~------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~i 159 (929)
+|++|++|+|++|.+ .| .+|... +.+|+ +++++|.+.+.+|..+..+ ..+..+++....+..
T Consensus 103 ~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~-- 177 (636)
T 4eco_A 103 QLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK-- 177 (636)
T ss_dssp GCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC--
T ss_pred cCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccccc--
Confidence 999999999999976 33 445444 56777 8888888888888777633 344445544332220
Q ss_pred ChhhhccCCCCcEEEcc--ccccCCCCCccccccCCCccCCCCcccEEEeecccCCCc-----------------cCCcc
Q 002376 160 TDDQLRNLRSLQVLNFG--KNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGT-----------------VPSTI 220 (929)
Q Consensus 160 ~~~~~~~l~~L~~L~Ls--~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~ 220 (929)
.....++.+.+. .|+++| +| ..|+++++|++|+|++|++++. +|..+
T Consensus 178 -----~~~~~l~~l~l~~~~n~l~~-ip--------~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l 243 (636)
T 4eco_A 178 -----SSRITLKDTQIGQLSNNITF-VS--------KAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDL 243 (636)
T ss_dssp -----CCCCCCCTTTTTCCSCEEEE-EC--------GGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCC
T ss_pred -----ccccchhhhhhccccCCCcc-CC--------HHHhcccCCCEEECcCCccccccccccccccccchhcccCchhh
Confidence 011111111111 233332 22 2233444455555555554443 44444
Q ss_pred c--cCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCc-CCC-CCCCccccc------ccccEEeccCccCcCCcc
Q 002376 221 Y--NMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNR-FTG-KIPGSLHNL------TNIQIIRMTHNLLEGTLP 290 (929)
Q Consensus 221 ~--~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~-l~~-~~p~~~~~l------~~L~~L~Ls~N~l~~~~p 290 (929)
. ++++|++|+|++|++.|.+|..+.. +++|++|++++|+ ++| .+|..++++ ++|+.|++++|+++ .+|
T Consensus 244 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~-l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip 321 (636)
T 4eco_A 244 KWDNLKDLTDVEVYNCPNLTKLPTFLKA-LPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFP 321 (636)
T ss_dssp CGGGCTTCCEEEEECCTTCSSCCTTTTT-CSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCC
T ss_pred hhcccCCCCEEEecCCcCCccChHHHhc-CCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccC
Confidence 4 5555555555555554444443333 4444444444444 444 445444443 56666666666666 555
Q ss_pred C--CCCCCCccceecccccccc-CCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCcccc
Q 002376 291 P--GLGNLPFLRTYNIGFNKIV-SSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYG 367 (929)
Q Consensus 291 ~--~~~~l~~L~~L~L~~N~i~-~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~ 367 (929)
. .|+++++|++|++++|++. .++ .+.++++|++|+|++|+++ .+|..+..+..+|++|++++|+++
T Consensus 322 ~~~~l~~l~~L~~L~L~~N~l~g~ip---------~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~- 390 (636)
T 4eco_A 322 VETSLQKMKKLGMLECLYNQLEGKLP---------AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK- 390 (636)
T ss_dssp CHHHHTTCTTCCEEECCSCCCEEECC---------CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-
T ss_pred chhhhccCCCCCEEeCcCCcCccchh---------hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-
Confidence 4 4544444444444444443 211 2344556666666777666 666666666522677777777666
Q ss_pred ccCCCCCCCC--cccEEEeeCCCCCcccCcccc-------CCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccc
Q 002376 368 KIPASIGRLR--SLTLLDLSYNSISGEIPIEIG-------QLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELT 438 (929)
Q Consensus 368 ~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 438 (929)
.+|..+..++ +|++|+|++|++++.+|..+. .+++|++|+|++|++++..+..+..+++|++|+|++|+++
T Consensus 391 ~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~ 470 (636)
T 4eco_A 391 YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT 470 (636)
T ss_dssp SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS
T ss_pred ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC
Confidence 5566665544 666777777776666666666 5566666666666666444444555666666666666666
Q ss_pred cccCc-ccccc-------cccceecccCCcCCCCCCCCcccCCchhhh--cccCccEEEecCCCCCCCCCcchhcCcCcc
Q 002376 439 GEIPI-SFGNF-------QSLLSIDLSNNRINGNIPKGILRPLPEEIS--RLENVVTIDLSDNSLSGNLPNSLKNCKSLE 508 (929)
Q Consensus 439 ~~~p~-~~~~l-------~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~--~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~ 508 (929)
.+|. .+... ++|+.|+|++|+|+ .+ |..+. .+++|+.|||++|++++ +|..+.++++|+
T Consensus 471 -~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l--------p~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~ 539 (636)
T 4eco_A 471 -EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KL--------SDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLK 539 (636)
T ss_dssp -BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BC--------CGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCC
T ss_pred -CcCHHHhccccccccccCCccEEECcCCcCC-cc--------ChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCC
Confidence 3333 22222 26666666666665 23 44444 55666666666666665 566666666666
Q ss_pred eeec------ccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcc
Q 002376 509 ELLM------AYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEG 567 (929)
Q Consensus 509 ~L~L------s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 567 (929)
.|+| ++|++.+.+|..++.+++|++|||++|++ +.+|..+. ++|+.|||++|++..
T Consensus 540 ~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 540 GFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp EEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCE
T ss_pred EEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCcc
Confidence 6666 33455555555555555555555555555 34555443 455555555555544
No 4
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=7.4e-58 Score=550.44 Aligned_cols=502 Identities=22% Similarity=0.252 Sum_probs=439.1
Q ss_pred CcceeeCCCC---------CcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCC
Q 002376 61 WPGVICNNFG---------NRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNL 131 (929)
Q Consensus 61 w~gv~c~~~~---------~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 131 (929)
+.-+.|...+ ..++.|||++|.+++..|..|+++++|++|+|++|++++..|.+|+++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 4456786532 3688999999999988889999999999999999999999999999999999999999999
Q ss_pred CCCcccccccccccceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeeccc
Q 002376 132 QGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINR 211 (929)
Q Consensus 132 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~ 211 (929)
++..|..|+++++|++|+|++|+++ .+++..|.++++|++|+|++|++.+.. ...+..+++|++|+|++|+
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~-~l~~~~~~~l~~L~~L~L~~n~l~~~~--------~~~~~~l~~L~~L~L~~n~ 164 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGIS-SIDFIPLHNQKTLESLYLGSNHISSIK--------LPKGFPTEKLKVLDFQNNA 164 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCS-CGGGSCCTTCTTCCEEECCSSCCCCCC--------CCTTCCCTTCCEEECCSSC
T ss_pred cccChhhhcccccccEeeccccCcc-cCCcchhccCCcccEEECCCCcccccC--------cccccCCcccCEEEcccCc
Confidence 9999999999999999999999998 465556999999999999999986522 1233448999999999999
Q ss_pred CCCccCCccccCCCCc--eEEeeecCCCCcCCcccccCCCCcceeeccCCcC--------------------------CC
Q 002376 212 LAGTVPSTIYNMTSLV--HLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRF--------------------------TG 263 (929)
Q Consensus 212 l~~~~p~~~~~l~~L~--~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l--------------------------~~ 263 (929)
+++..|..|..+++|+ +|++++|++++..|. .+. ..+|+.++++.|.. ..
T Consensus 165 l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~-~~~-~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~ 242 (606)
T 3t6q_A 165 IHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPG-AFD-SAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDED 242 (606)
T ss_dssp CCEECHHHHHTTTTCCSEEEECTTCCCCEECTT-TTT-TCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCC
T ss_pred ccccChhhhhhhcccceeEEecCCCccCccChh-Hhh-hccccccccCCchhHHHHhhhccccchhheechhhccccccc
Confidence 9999899999999999 899999999965444 444 46788888877641 01
Q ss_pred CCCCcccccc--cccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccc
Q 002376 264 KIPGSLHNLT--NIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFE 341 (929)
Q Consensus 264 ~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 341 (929)
..+..+..+. +|+.|++++|.+++..+..|+.+++|++|++++|++..++ ..+.++++|++|++++|+++
T Consensus 243 i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp--------~~l~~l~~L~~L~l~~n~l~ 314 (606)
T 3t6q_A 243 ISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELP--------SGLVGLSTLKKLVLSANKFE 314 (606)
T ss_dssp CCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCC--------SSCCSCTTCCEEECTTCCCS
T ss_pred cChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCCC--------hhhcccccCCEEECccCCcC
Confidence 1122333333 7999999999999988889999999999999999998654 45788999999999999999
Q ss_pred cccCchhhhccccccEEEecCCccccccCC-CCCCCCcccEEEeeCCCCCccc--CccccCCCCCCEEEecCCcCCCCCc
Q 002376 342 GKIPESIGNFSNELSKLYLGGNHIYGKIPA-SIGRLRSLTLLDLSYNSISGEI--PIEIGQLQGLQVLGLAGNEIPGGIP 418 (929)
Q Consensus 342 ~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p 418 (929)
+..|..+..++ +|++|++++|.+.+.+|. .+..+++|++|++++|.+++.. |..+..+++|++|++++|++.+..|
T Consensus 315 ~~~~~~~~~l~-~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 393 (606)
T 3t6q_A 315 NLCQISASNFP-SLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKT 393 (606)
T ss_dssp BGGGGCGGGCT-TCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECT
T ss_pred cCchhhhhccC-cCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCH
Confidence 88888888887 899999999999977765 4999999999999999999776 7889999999999999999999999
Q ss_pred ccccCCCCCceecccCcccccccCcc-cccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCC--
Q 002376 419 NSLANLKKLNQIDLSGNELTGEIPIS-FGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSG-- 495 (929)
Q Consensus 419 ~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~-- 495 (929)
..|..+++|++|++++|++++..|.. |.++++|+.|++++|.+++.. |..+..+++|++|+|++|++++
T Consensus 394 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~--------~~~~~~l~~L~~L~L~~n~l~~~~ 465 (606)
T 3t6q_A 394 EAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISS--------EQLFDGLPALQHLNLQGNHFPKGN 465 (606)
T ss_dssp TTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTC--------TTTTTTCTTCCEEECTTCBCGGGE
T ss_pred HHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcC--------HHHHhCCCCCCEEECCCCCCCccc
Confidence 99999999999999999999876654 899999999999999998654 6677889999999999999987
Q ss_pred -CCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCCCC-C
Q 002376 496 -NLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSE-G 573 (929)
Q Consensus 496 -~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~ 573 (929)
..+..+..+++|++|+|++|++++.+|..|+.+++|+.|||++|++++..|..+.+++.| +|++++|++++.+|.. .
T Consensus 466 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~ 544 (606)
T 3t6q_A 466 IQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLP 544 (606)
T ss_dssp ECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHH
T ss_pred cccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcc
Confidence 334679999999999999999999999999999999999999999999999999999999 9999999999887764 4
Q ss_pred CCCCCCcccccCCCCCcC
Q 002376 574 IFRNMSNVHLKGNPKLCL 591 (929)
Q Consensus 574 ~~~~l~~l~l~~N~~~c~ 591 (929)
.+++++.+++++||+.|.
T Consensus 545 ~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 545 ILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp HHHTSSEEECTTCCEECS
T ss_pred cCCCCCEEeCCCCCcccc
Confidence 578899999999999983
No 5
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=4.1e-57 Score=551.42 Aligned_cols=504 Identities=25% Similarity=0.274 Sum_probs=380.1
Q ss_pred CcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecc
Q 002376 71 NRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDL 150 (929)
Q Consensus 71 ~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 150 (929)
.+++.|+|++|.+++..+..|+++++|++|+|++|.+++..|..|+++++|++|+|++|++++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 47899999999999877778999999999999999999999999999999999999999999766678999999999999
Q ss_pred cccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccc--cCCCCce
Q 002376 151 MANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIY--NMTSLVH 228 (929)
Q Consensus 151 s~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~ 228 (929)
++|+++ .+++..|+++++|++|+|++|.+++..| ..|.++++|++|+|++|++++..+..+. .+++|++
T Consensus 105 ~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--------~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~ 175 (680)
T 1ziw_A 105 MSNSIQ-KIKNNPFVKQKNLITLDLSHNGLSSTKL--------GTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKK 175 (680)
T ss_dssp CSSCCC-CCCSCTTTTCTTCCEEECCSSCCSCCCC--------CSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESE
T ss_pred CCCccC-ccChhHccccCCCCEEECCCCcccccCc--------hhhcccccCCEEEccCCcccccCHHHhhccccccccE
Confidence 999998 5676669999999999999998866544 4456677788888888877776666543 4577777
Q ss_pred EEeeecCCCCcCCccccc--------------------------CCCCcceeeccCCcCCCCCCCccccccc--ccEEec
Q 002376 229 LRLASNQLGGEIPYDVRD--------------------------TLPNLLDFIYCFNRFTGKIPGSLHNLTN--IQIIRM 280 (929)
Q Consensus 229 L~Ls~N~l~~~ip~~~~~--------------------------~l~~L~~l~l~~N~l~~~~p~~~~~l~~--L~~L~L 280 (929)
|+|++|++++..|..+.. ..++|+.|++++|++++..|..|.+++. |+.|++
T Consensus 176 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~L 255 (680)
T 1ziw_A 176 LELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDL 255 (680)
T ss_dssp EECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEEC
T ss_pred EECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEEC
Confidence 777777777554433221 0144556666666666666666666544 666666
Q ss_pred cCccCcCCccCCCCCCCccceeccccccccCCCCCC--C---C-----------------ccc----cccCCCCCCCEEE
Q 002376 281 THNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDE--G---L-----------------SFI----TSLTNSTHLNYLA 334 (929)
Q Consensus 281 s~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~--~---~-----------------~~~----~~~~~l~~L~~L~ 334 (929)
++|.+++..|..|+.+++|++|++++|++....... + + ..+ ..+..+++|++|+
T Consensus 256 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~ 335 (680)
T 1ziw_A 256 SYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLN 335 (680)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEE
T ss_pred CCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEE
Confidence 666666666666666666666666666654432210 0 0 000 1456677888888
Q ss_pred ccCCccccccCchhhhcc---------------------------ccccEEEecCCccccccCCCCCCCCcccEEEeeCC
Q 002376 335 LDGNQFEGKIPESIGNFS---------------------------NELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYN 387 (929)
Q Consensus 335 Ls~N~l~~~~p~~~~~~~---------------------------~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 387 (929)
+++|++++..|..+..+. .+|+.|++++|++++..|..|..+++|++|+|++|
T Consensus 336 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 415 (680)
T 1ziw_A 336 MEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLN 415 (680)
T ss_dssp CCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCC
Confidence 888888776666555443 13445555556666666777777777888888888
Q ss_pred CCCcccC-ccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccc--cccCcccccccccceecccCCcCCCC
Q 002376 388 SISGEIP-IEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELT--GEIPISFGNFQSLLSIDLSNNRINGN 464 (929)
Q Consensus 388 ~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~g~ 464 (929)
.+++.+| ..|.++++|++|++++|++.+..+..|..+++|+.|++++|.++ +.+|..|.++++|+.|+|++|+|++.
T Consensus 416 ~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i 495 (680)
T 1ziw_A 416 EIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANI 495 (680)
T ss_dssp CCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCC
T ss_pred cCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcC
Confidence 7776555 56777777888888888777777777777788888888888776 46777888888888888888888743
Q ss_pred CCCCcccCCchhhhcccCccEEEecCCCCCCCC--------CcchhcCcCcceeecccccccccCCccccCCCCCCEEEC
Q 002376 465 IPKGILRPLPEEISRLENVVTIDLSDNSLSGNL--------PNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDL 536 (929)
Q Consensus 465 i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~--------p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 536 (929)
. |..+..+++|++|||++|++++.. +..|.++++|++|+|++|+|+...+..|..+++|+.|||
T Consensus 496 ~--------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 567 (680)
T 1ziw_A 496 N--------DDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDL 567 (680)
T ss_dssp C--------TTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred C--------hhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeEC
Confidence 2 455777888999999999887542 234788899999999999999666677999999999999
Q ss_pred CCCcCCCcCCcccccCCCCCeEeCCCCcCcccCCCC-C-CCCCCCcccccCCCCCcC
Q 002376 537 SSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSE-G-IFRNMSNVHLKGNPKLCL 591 (929)
Q Consensus 537 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~-~~~~l~~l~l~~N~~~c~ 591 (929)
++|++++..+..|.++++|+.|+|++|++++.+|.. . .+++++.+++.+||+.|.
T Consensus 568 s~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 568 GLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred CCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 999999877777889999999999999999877653 2 478899999999999994
No 6
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-56 Score=555.18 Aligned_cols=494 Identities=21% Similarity=0.229 Sum_probs=414.7
Q ss_pred CCCcceeeCCCCCcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCC-CcCCCCCCCCcEEeCCCCCCCCCccc
Q 002376 59 CTWPGVICNNFGNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNL-PREIGNLFRLRVLNISFNNLQGELPV 137 (929)
Q Consensus 59 c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~ 137 (929)
|.|..|-+ ...+++.|||++|.+++..|.+|.++++|++|||++|.+.+.+ |.+|+++++|++|+|++|.|++..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 56888776 3458999999999999999999999999999999999777666 78899999999999999999999999
Q ss_pred ccccccccceecccccccCCCCCh-hhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCcc
Q 002376 138 NISKLTELKMLDLMANKITGRVTD-DQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTV 216 (929)
Q Consensus 138 ~~~~l~~L~~L~Ls~N~l~~~i~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~ 216 (929)
.|.++++|++|+|++|++++.++. ..|+++++|++|+|++|.+++..| +..|+++++|++|+|++|++++..
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~-------~~~~~~L~~L~~L~Ls~N~i~~~~ 164 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYL-------HPSFGKLNSLKSIDFSSNQIFLVC 164 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCC-------CGGGGTCSSCCEEEEESSCCCCCC
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCccccccc-------chhHhhCCCCCEEECCCCcCCeeC
Confidence 999999999999999999975554 458999999999999999865432 245788999999999999999999
Q ss_pred CCccccC--CCCceEEeeecCCCCcCCcccccCCC------CcceeeccCCcCCCCCCCccccc----------------
Q 002376 217 PSTIYNM--TSLVHLRLASNQLGGEIPYDVRDTLP------NLLDFIYCFNRFTGKIPGSLHNL---------------- 272 (929)
Q Consensus 217 p~~~~~l--~~L~~L~Ls~N~l~~~ip~~~~~~l~------~L~~l~l~~N~l~~~~p~~~~~l---------------- 272 (929)
+..|..+ ++|+.|+|++|.+.+.+|..+.. ++ .|+.|++++|++++.++..+...
T Consensus 165 ~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~-~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~ 243 (844)
T 3j0a_A 165 EHELEPLQGKTLSFFSLAANSLYSRVSVDWGK-CMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIM 243 (844)
T ss_dssp SGGGHHHHHCSSCCCEECCSBSCCCCCCCCCS-SSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCC
T ss_pred HHHcccccCCccceEECCCCccccccccchhh-cCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccc
Confidence 9999988 89999999999999888876544 33 38999999999888777655432
Q ss_pred ----------------------ccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCC
Q 002376 273 ----------------------TNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHL 330 (929)
Q Consensus 273 ----------------------~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L 330 (929)
++|+.|++++|.+.+..|..|..+++|+.|++++|+|..... ..|.++++|
T Consensus 244 ~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~-------~~~~~l~~L 316 (844)
T 3j0a_A 244 GAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIAD-------EAFYGLDNL 316 (844)
T ss_dssp BCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECT-------TTTTTCSSC
T ss_pred cccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCCh-------HHhcCCCCC
Confidence 578888888888888888888888888888888888876543 356778888
Q ss_pred CEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecC
Q 002376 331 NYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAG 410 (929)
Q Consensus 331 ~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 410 (929)
++|+|++|++++..|..+..++ +|+.|+|++|++.+..+..|..+++|++|+|++|.+++. ..+++|+.|++++
T Consensus 317 ~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~ 390 (844)
T 3j0a_A 317 QVLNLSYNLLGELYSSNFYGLP-KVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSG 390 (844)
T ss_dssp CEEEEESCCCSCCCSCSCSSCT-TCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEES
T ss_pred CEEECCCCCCCccCHHHhcCCC-CCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCC
Confidence 8888888888877777777776 688888888888877777888888888888888888742 2377888888888
Q ss_pred CcCCCCCcccccCCCCCceecccCcccccccC-cccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEec
Q 002376 411 NEIPGGIPNSLANLKKLNQIDLSGNELTGEIP-ISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLS 489 (929)
Q Consensus 411 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs 489 (929)
|+++ .+|.. ..+++.|++++|++++... ..+.++++|+.|+|++|++++..+. ..+..+++|+.|+|+
T Consensus 391 N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-------~~~~~~~~L~~L~Ls 459 (844)
T 3j0a_A 391 NKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGD-------QTPSENPSLEQLFLG 459 (844)
T ss_dssp CCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSS-------SSSCSCTTCCBCEEE
T ss_pred CCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccc-------cccccCCccccccCC
Confidence 8887 34443 4578889999999886422 2356889999999999999864322 123446789999999
Q ss_pred CCCCC-----CCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCc
Q 002376 490 DNSLS-----GNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNN 564 (929)
Q Consensus 490 ~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 564 (929)
+|.++ +..|..|.++++|+.|+|++|+|++.+|..|..+++|+.|+|++|+|++..|..+. ++|+.|||++|+
T Consensus 460 ~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~ 537 (844)
T 3j0a_A 460 ENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQ 537 (844)
T ss_dssp SCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEEC
T ss_pred CCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCc
Confidence 99997 55567899999999999999999999999999999999999999999987777776 899999999999
Q ss_pred CcccCCCCCCCCCCCcccccCCCCCc
Q 002376 565 LEGVVPSEGIFRNMSNVHLKGNPKLC 590 (929)
Q Consensus 565 l~~~~p~~~~~~~l~~l~l~~N~~~c 590 (929)
+++.+|.. |.+++.+++.+||+.|
T Consensus 538 l~~~~~~~--~~~L~~l~l~~Np~~C 561 (844)
T 3j0a_A 538 LLAPNPDV--FVSLSVLDITHNKFIC 561 (844)
T ss_dssp CCCCCSCC--CSSCCEEEEEEECCCC
T ss_pred CCCCChhH--hCCcCEEEecCCCccc
Confidence 99998864 7789999999999999
No 7
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.6e-57 Score=552.10 Aligned_cols=510 Identities=23% Similarity=0.308 Sum_probs=311.0
Q ss_pred CCCcCChhhHHHHHHHHhhcCCCCCCCCCCCCCCCC-----CC--CCC------------cceeeCCCCCcEEEEEcCCC
Q 002376 21 SASVGINTDKEALMSFKSQISQESPSSPLSYWNPSS-----SP--CTW------------PGVICNNFGNRVIGLNLSSF 81 (929)
Q Consensus 21 ~~~~~~~~~~~aLl~~k~~~~~~~~~~~l~~w~~~~-----~~--c~w------------~gv~c~~~~~~v~~l~l~~~ 81 (929)
+++++..+|++||++||+++.+ | +|+.+. +| |.| .||+|+. .+||+.|+|+++
T Consensus 262 ~~~~~~~~d~~ALl~~k~~l~~--~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~ 333 (876)
T 4ecn_A 262 KETAEYIKDYKALKAIWEALDG--K-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGF 333 (876)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTG--G-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTT
T ss_pred cccccchHHHHHHHHHHHHcCC--C-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccC
Confidence 3445567899999999999853 3 897654 56 999 9999997 579999999999
Q ss_pred CCccccCCCCCCCCCCCEEEe-ecCCCCCCCCcCCCCC----CC-----CcE------Ee-CCCCCCCC-----------
Q 002376 82 GLEGTISPHIGNLSFLRSIQL-QNNKLSGNLPREIGNL----FR-----LRV------LN-ISFNNLQG----------- 133 (929)
Q Consensus 82 ~l~g~i~~~l~~L~~L~~L~L-s~N~l~~~~p~~~~~l----~~-----L~~------L~-Ls~N~l~~----------- 133 (929)
++.|.+|++|++|++|++||| ++|.++|..|..-... .. ++. ++ .....+.+
T Consensus 334 ~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~ 413 (876)
T 4ecn_A 334 GAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPE 413 (876)
T ss_dssp CCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTT
T ss_pred CCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcc
Confidence 999999999999999999999 9999988855432211 00 000 00 00011111
Q ss_pred Ccccccccccccceecccc--cccCCCCChhhhccCCCCcEEEccccccCC-CCCccccc--------cCCCccC--CCC
Q 002376 134 ELPVNISKLTELKMLDLMA--NKITGRVTDDQLRNLRSLQVLNFGKNLLWG-SIPPSIAN--------LIPSDLS--RLE 200 (929)
Q Consensus 134 ~~p~~~~~l~~L~~L~Ls~--N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~i~~--------l~p~~~~--~l~ 200 (929)
..+........++.+.+.. |+++| ||.. |+++++|++|+|++|+++| .+|..+.. .+|..++ +++
T Consensus 414 ~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~-l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~ 491 (876)
T 4ecn_A 414 MKPIKKDSRISLKDTQIGNLTNRITF-ISKA-IQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLK 491 (876)
T ss_dssp SCCCCCCCCCCCCTTTTTCCSCEEEE-ECGG-GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCT
T ss_pred ccccccccccchhhceeccccCcccc-hhHH-HhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCC
Confidence 1111122334455555554 88886 7776 8888888888888888877 23322211 1455555 788
Q ss_pred cccEEEeecccCCCccCCccccCCCCceEEeeecC-CCC-cCCccccc------CCCCcceeeccCCcCCCCCCC--ccc
Q 002376 201 NLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQ-LGG-EIPYDVRD------TLPNLLDFIYCFNRFTGKIPG--SLH 270 (929)
Q Consensus 201 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~ip~~~~~------~l~~L~~l~l~~N~l~~~~p~--~~~ 270 (929)
+|++|+|++|++.+.+|..|.++++|++|+|++|+ ++| .+|..+.. .+++|+.|++++|+++ .+|. .+.
T Consensus 492 ~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~ 570 (876)
T 4ecn_A 492 DLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQ 570 (876)
T ss_dssp TCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHT
T ss_pred CCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhh
Confidence 88888888888888888888888888888888887 776 67765443 2335666666666665 5555 566
Q ss_pred ccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhh
Q 002376 271 NLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGN 350 (929)
Q Consensus 271 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 350 (929)
++++|+.|+|++|.++ .+| .|+.+++|+.|++++|+ ++ .+|..++.
T Consensus 571 ~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~-------------------------------l~-~lp~~l~~ 616 (876)
T 4ecn_A 571 KMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQ-------------------------------IE-EIPEDFCA 616 (876)
T ss_dssp TCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSC-------------------------------CS-CCCTTSCE
T ss_pred cCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCc-------------------------------cc-cchHHHhh
Confidence 6666666666666665 444 55555555555555554 44 44444444
Q ss_pred ccccccEEEecCCccccccCCCCCCCCc--ccEEEeeCCCCCcccCccc---c--CCCCCCEEEecCCcCCCCCcccccC
Q 002376 351 FSNELSKLYLGGNHIYGKIPASIGRLRS--LTLLDLSYNSISGEIPIEI---G--QLQGLQVLGLAGNEIPGGIPNSLAN 423 (929)
Q Consensus 351 ~~~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~~~p~~~---~--~l~~L~~L~L~~N~l~~~~p~~~~~ 423 (929)
+..+|+.|+|++|+|+ .+|..+..++. |+.|+|++|++++.+|... . .+++|+.|+|++|+++...+..+..
T Consensus 617 l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~ 695 (876)
T 4ecn_A 617 FTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFAT 695 (876)
T ss_dssp ECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHT
T ss_pred ccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHcc
Confidence 4411555555555554 44444444432 5555555555554433211 1 2235555555555555332233335
Q ss_pred CCCCceecccCcccccccCcccc--------cccccceecccCCcCCCCCCCCcccCCchhhh--cccCccEEEecCCCC
Q 002376 424 LKKLNQIDLSGNELTGEIPISFG--------NFQSLLSIDLSNNRINGNIPKGILRPLPEEIS--RLENVVTIDLSDNSL 493 (929)
Q Consensus 424 l~~L~~L~Ls~N~l~~~~p~~~~--------~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~--~l~~L~~LdLs~N~l 493 (929)
+++|+.|+|++|+++ .+|..+. ++++|+.|+|++|+|+ .+ |..+. .+++|+.|+|++|++
T Consensus 696 l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~l--------p~~l~~~~l~~L~~L~Ls~N~L 765 (876)
T 4ecn_A 696 GSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SL--------SDDFRATTLPYLSNMDVSYNCF 765 (876)
T ss_dssp TCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CC--------CGGGSTTTCTTCCEEECCSSCC
T ss_pred CCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cc--------hHHhhhccCCCcCEEEeCCCCC
Confidence 555555555555555 3333221 1225666666666655 23 44443 555666666666666
Q ss_pred CCCCCcchhcCcCcceeeccc------ccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcc
Q 002376 494 SGNLPNSLKNCKSLEELLMAY------NQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEG 567 (929)
Q Consensus 494 ~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 567 (929)
++ +|..+.++++|+.|+|++ |++.+.+|..|..+++|+.|+|++|++ +.+|..+. ++|+.|||++|++..
T Consensus 766 ~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 766 SS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNIS 841 (876)
T ss_dssp SS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCE
T ss_pred Cc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCc
Confidence 65 555666666666666654 677777777777777777777777777 56776655 577778888777766
Q ss_pred cCCCCC-CCCCCCcccccCCCCCc
Q 002376 568 VVPSEG-IFRNMSNVHLKGNPKLC 590 (929)
Q Consensus 568 ~~p~~~-~~~~l~~l~l~~N~~~c 590 (929)
..+..- .........+.+|+..+
T Consensus 842 i~~~~~~~~~~~~~~~L~~n~~~~ 865 (876)
T 4ecn_A 842 IDVTSVCPYIEAGMYVLLYDKTQD 865 (876)
T ss_dssp EECGGGHHHHHTTCCEEECCTTSE
T ss_pred cChHHccccccchheeecCCCccc
Confidence 544321 11123344555665443
No 8
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=7.8e-57 Score=541.53 Aligned_cols=485 Identities=21% Similarity=0.215 Sum_probs=430.5
Q ss_pred CcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecc
Q 002376 71 NRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDL 150 (929)
Q Consensus 71 ~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 150 (929)
.+++.|+|++|.+++..+..|.++++|++|+|++|++++..|.+|+++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 47899999999999888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCChhhhccCCCCcEEEccccccCC-CCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCc--
Q 002376 151 MANKITGRVTDDQLRNLRSLQVLNFGKNLLWG-SIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLV-- 227 (929)
Q Consensus 151 s~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-- 227 (929)
++|+++ .+++..|+++++|++|+|++|++.+ .+ |..|+++++|++|+|++|++++..|..|..+++|+
T Consensus 112 ~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~l--------p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~ 182 (606)
T 3vq2_A 112 VETKLA-SLESFPIGQLITLKKLNVAHNFIHSCKL--------PAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQV 182 (606)
T ss_dssp TTSCCC-CSSSSCCTTCTTCCEEECCSSCCCCCCC--------CGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTC
T ss_pred cCCccc-cccccccCCCCCCCEEeCCCCcccceec--------hHhHhhcCCCCEEEccCCcceecChhhhhhhhccccc
Confidence 999998 4665569999999999999999864 33 45677899999999999999999999998888776
Q ss_pred --eEEeeecCCCCcCCcccccCCCCcceeeccCCcCC-CCCCCcccccccccEEec------------------------
Q 002376 228 --HLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFT-GKIPGSLHNLTNIQIIRM------------------------ 280 (929)
Q Consensus 228 --~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~-~~~p~~~~~l~~L~~L~L------------------------ 280 (929)
+|++++|+++ .+|...+... +|+.|++++|.++ +.+|..+.++++|+.+++
T Consensus 183 l~~L~l~~n~l~-~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~ 260 (606)
T 3vq2_A 183 NLSLDMSLNPID-FIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCD 260 (606)
T ss_dssp CCEEECTTCCCC-EECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGG
T ss_pred cceeeccCCCcc-eeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhh
Confidence 8999999998 6777776644 8999999999987 455666777777666665
Q ss_pred ---------cCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhc
Q 002376 281 ---------THNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNF 351 (929)
Q Consensus 281 ---------s~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 351 (929)
..|.+++.+|. +..+++|+.|++++|.+...+ .+..+++|++|++++|++ +.+|. + .+
T Consensus 261 l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l~---------~l~~~~~L~~L~l~~n~l-~~lp~-~-~l 327 (606)
T 3vq2_A 261 VTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYLE---------DVPKHFKWQSLSIIRCQL-KQFPT-L-DL 327 (606)
T ss_dssp SEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCCC---------CCCTTCCCSEEEEESCCC-SSCCC-C-CC
T ss_pred ccHhheeccccccccccccc-cccCCCCCEEEecCccchhhh---------hccccccCCEEEcccccC-ccccc-C-CC
Confidence 67788888887 999999999999999987653 567789999999999999 68884 4 66
Q ss_pred cccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcc--cCccccCCCCCCEEEecCCcCCCCCcccccCCCCCce
Q 002376 352 SNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGE--IPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQ 429 (929)
Q Consensus 352 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 429 (929)
+ +|++|++++|+..+.+ .+..+++|++|++++|++++. .|..+..+++|++|++++|.+++ +|..+..+++|++
T Consensus 328 ~-~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~ 403 (606)
T 3vq2_A 328 P-FLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQH 403 (606)
T ss_dssp S-SCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCE
T ss_pred C-ccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCe
Confidence 5 8999999999766544 678999999999999999876 48889999999999999999985 6688999999999
Q ss_pred ecccCcccccccC-cccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCC-CCCcchhcCcCc
Q 002376 430 IDLSGNELTGEIP-ISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSG-NLPNSLKNCKSL 507 (929)
Q Consensus 430 L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~-~~p~~~~~l~~L 507 (929)
|++++|++++..| ..|.++++|+.|++++|++++.+ |..+..+++|++|++++|++++ .+|..|+.+++|
T Consensus 404 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~--------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 475 (606)
T 3vq2_A 404 LDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDF--------DGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNL 475 (606)
T ss_dssp EECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECC--------TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC
T ss_pred eECCCCccCCccChhhhhccccCCEEECcCCCCCccc--------hhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCC
Confidence 9999999998887 68999999999999999998655 6678889999999999999998 479999999999
Q ss_pred ceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCCCCCCCC-CCCcccccCC
Q 002376 508 EELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFR-NMSNVHLKGN 586 (929)
Q Consensus 508 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~l~~l~l~~N 586 (929)
++|+|++|++++.+|..|..+++|++|+|++|++++.+|..+.++++|++|++++|+++..++....++ +++.+++++|
T Consensus 476 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N 555 (606)
T 3vq2_A 476 TFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNN 555 (606)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSC
T ss_pred CEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCC
Confidence 999999999999999999999999999999999999999999999999999999999996554434454 6999999999
Q ss_pred CCCcC
Q 002376 587 PKLCL 591 (929)
Q Consensus 587 ~~~c~ 591 (929)
|+.|.
T Consensus 556 ~~~c~ 560 (606)
T 3vq2_A 556 SVACI 560 (606)
T ss_dssp CCCCS
T ss_pred CcccC
Confidence 99994
No 9
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.2e-53 Score=520.91 Aligned_cols=494 Identities=22% Similarity=0.283 Sum_probs=366.9
Q ss_pred EEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceeccccccc
Q 002376 76 LNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKI 155 (929)
Q Consensus 76 l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 155 (929)
+|+++++++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|.+++..|..|+++++|++|+|++|++
T Consensus 9 ~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 85 (680)
T 1ziw_A 9 ADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNEL 85 (680)
T ss_dssp EECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCC
T ss_pred eECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCcc
Confidence 556666676 6887775 7999999999999988888999999999999999999999999999999999999999999
Q ss_pred CCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecC
Q 002376 156 TGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQ 235 (929)
Q Consensus 156 ~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 235 (929)
+ .+|+..|.++++|++|+|++|++++ +.|..|+++++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 86 ~-~l~~~~~~~l~~L~~L~L~~n~l~~--------~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 156 (680)
T 1ziw_A 86 S-QLSDKTFAFCTNLTELHLMSNSIQK--------IKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNK 156 (680)
T ss_dssp C-CCCTTTTTTCTTCSEEECCSSCCCC--------CCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSC
T ss_pred C-ccChhhhccCCCCCEEECCCCccCc--------cChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCc
Confidence 8 6888779999999999999998854 344567889999999999999999999999999999999999999
Q ss_pred CCCcCCcccc-cCCCCcceeeccCCcCCCCCCCccccc---------------------------ccccEEeccCccCcC
Q 002376 236 LGGEIPYDVR-DTLPNLLDFIYCFNRFTGKIPGSLHNL---------------------------TNIQIIRMTHNLLEG 287 (929)
Q Consensus 236 l~~~ip~~~~-~~l~~L~~l~l~~N~l~~~~p~~~~~l---------------------------~~L~~L~Ls~N~l~~ 287 (929)
+++..+..+. ..+++|+.|++++|++++..|..+..+ ++|+.|++++|.+++
T Consensus 157 l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~ 236 (680)
T 1ziw_A 157 IQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLST 236 (680)
T ss_dssp CCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCE
T ss_pred ccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccc
Confidence 9865554432 236899999999999999998877655 457888889999999
Q ss_pred CccCCCCCCCc--cceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhcc-------------
Q 002376 288 TLPPGLGNLPF--LRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFS------------- 352 (929)
Q Consensus 288 ~~p~~~~~l~~--L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~------------- 352 (929)
..|..|.+++. |+.|++++|++..... ..+..+++|++|+|++|++++..|..+..+.
T Consensus 237 ~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~-------~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~ 309 (680)
T 1ziw_A 237 TSNTTFLGLKWTNLTMLDLSYNNLNVVGN-------DSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTK 309 (680)
T ss_dssp ECTTTTGGGGGSCCCEEECTTSCCCEECT-------TTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCC
T ss_pred cChhHhhccCcCCCCEEECCCCCcCccCc-------ccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhh
Confidence 99999999876 9999999999987653 4577888999999999988877776655543
Q ss_pred -------------------ccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcc--cCccccCC--CCCCEEEec
Q 002376 353 -------------------NELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGE--IPIEIGQL--QGLQVLGLA 409 (929)
Q Consensus 353 -------------------~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l--~~L~~L~L~ 409 (929)
.+|++|++++|++++..+..|.++++|++|+|++|.++.. .+..|..+ ++|++|+++
T Consensus 310 ~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~ 389 (680)
T 1ziw_A 310 QSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLT 389 (680)
T ss_dssp C------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECT
T ss_pred cccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECC
Confidence 1344555555555555555555555555555444432211 01111111 234444445
Q ss_pred CCcCCCCCcccccCCCCCceecccCcccccccC-cccccccccceecccCCcCCCCCCCCc------------------c
Q 002376 410 GNEIPGGIPNSLANLKKLNQIDLSGNELTGEIP-ISFGNFQSLLSIDLSNNRINGNIPKGI------------------L 470 (929)
Q Consensus 410 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~i~~~~------------------~ 470 (929)
+|++++..|..|..+++|++|+|++|++++.+| ..|.++++|++|++++|++++..+..+ .
T Consensus 390 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~ 469 (680)
T 1ziw_A 390 KNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNV 469 (680)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCT
T ss_pred CCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhcccccccc
Confidence 555555566667777777777777777766554 566677777777777777654322111 1
Q ss_pred cCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCC--------ccccCCCCCCEEECCCCcCC
Q 002376 471 RPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIP--------NIVAELKGLEVLDLSSNKLS 542 (929)
Q Consensus 471 ~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~ 542 (929)
...|..+..+++|+.|||++|++++..|..|.++++|++|+|++|++++..+ ..|+.+++|++|+|++|+++
T Consensus 470 ~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 549 (680)
T 1ziw_A 470 DSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD 549 (680)
T ss_dssp TCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC
T ss_pred ccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC
Confidence 2346667777778888888888777777777777788888888887775422 23677777888888888877
Q ss_pred CcCCcccccCCCCCeEeCCCCcCcccCCCC-CCCCCCCcccccCCCC
Q 002376 543 GSIPSDLQNLQALRSLNLTFNNLEGVVPSE-GIFRNMSNVHLKGNPK 588 (929)
Q Consensus 543 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~~~l~~l~l~~N~~ 588 (929)
...+..|.++++|+.|+|++|++++.++.. ..+++++.+++++|..
T Consensus 550 ~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l 596 (680)
T 1ziw_A 550 EIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLI 596 (680)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred CCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcC
Confidence 544456777788888888888887655543 3456777777777753
No 10
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.5e-54 Score=516.11 Aligned_cols=487 Identities=21% Similarity=0.222 Sum_probs=426.9
Q ss_pred CCCcceeeCCCC--CcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcc
Q 002376 59 CTWPGVICNNFG--NRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELP 136 (929)
Q Consensus 59 c~w~gv~c~~~~--~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 136 (929)
+.-.++...... .+++.|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|
T Consensus 43 n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~ 122 (606)
T 3t6q_A 43 NVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDF 122 (606)
T ss_dssp CCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGG
T ss_pred CccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCc
Confidence 344455332222 378899999999999889999999999999999999999999999999999999999999998888
Q ss_pred cccccccccceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCccc--EEEeecccCCC
Q 002376 137 VNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLK--VLDLTINRLAG 214 (929)
Q Consensus 137 ~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~--~L~Ls~N~l~~ 214 (929)
..|+++++|++|+|++|++++ ++...+..+++|++|+|++|.+++ +.|..|+.+++|+ .|++++|++++
T Consensus 123 ~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~--------~~~~~~~~l~~L~~l~L~l~~n~l~~ 193 (606)
T 3t6q_A 123 IPLHNQKTLESLYLGSNHISS-IKLPKGFPTEKLKVLDFQNNAIHY--------LSKEDMSSLQQATNLSLNLNGNDIAG 193 (606)
T ss_dssp SCCTTCTTCCEEECCSSCCCC-CCCCTTCCCTTCCEEECCSSCCCE--------ECHHHHHTTTTCCSEEEECTTCCCCE
T ss_pred chhccCCcccEEECCCCcccc-cCcccccCCcccCEEEcccCcccc--------cChhhhhhhcccceeEEecCCCccCc
Confidence 999999999999999999985 432335669999999999998754 3445677888998 89999999998
Q ss_pred ccCCccccCCCCceEEeeecCCC-------------------------CcCCcccccCCC--CcceeeccCCcCCCCCCC
Q 002376 215 TVPSTIYNMTSLVHLRLASNQLG-------------------------GEIPYDVRDTLP--NLLDFIYCFNRFTGKIPG 267 (929)
Q Consensus 215 ~~p~~~~~l~~L~~L~Ls~N~l~-------------------------~~ip~~~~~~l~--~L~~l~l~~N~l~~~~p~ 267 (929)
..|..|.. .+|++|++++|... ..++...+..+. +|+.+++++|++++..+.
T Consensus 194 ~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~ 272 (606)
T 3t6q_A 194 IEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSN 272 (606)
T ss_dssp ECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTT
T ss_pred cChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHH
Confidence 88877655 68999999887510 122333333333 789999999999999999
Q ss_pred cccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCch
Q 002376 268 SLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPES 347 (929)
Q Consensus 268 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 347 (929)
.|.++++|+.|++++|.++ .+|..+.++++|++|++++|++..... ..+.++++|++|++++|.+.+.+|..
T Consensus 273 ~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~-------~~~~~l~~L~~L~l~~n~~~~~~~~~ 344 (606)
T 3t6q_A 273 TFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQ-------ISASNFPSLTHLSIKGNTKRLELGTG 344 (606)
T ss_dssp TTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGG-------GCGGGCTTCSEEECCSCSSCCBCCSS
T ss_pred HhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCch-------hhhhccCcCCEEECCCCCcccccchh
Confidence 9999999999999999999 788899999999999999999976532 46788999999999999999888765
Q ss_pred -hhhccccccEEEecCCcccccc--CCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcc-cccC
Q 002376 348 -IGNFSNELSKLYLGGNHIYGKI--PASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPN-SLAN 423 (929)
Q Consensus 348 -~~~~~~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~ 423 (929)
+..+. +|++|++++|.+++.. +..++.+++|++|++++|++++..|..|..+++|++|++++|++++..|. .+.+
T Consensus 345 ~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 423 (606)
T 3t6q_A 345 CLENLE-NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQN 423 (606)
T ss_dssp TTTTCT-TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTT
T ss_pred hhhccC-cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhC
Confidence 66666 8999999999999877 88999999999999999999999999999999999999999999987665 4899
Q ss_pred CCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhc
Q 002376 424 LKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKN 503 (929)
Q Consensus 424 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~ 503 (929)
+++|++|++++|.+++..|..|.++++|++|++++|++++... ..+..+..+++|++|+|++|++++..|..|++
T Consensus 424 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-----~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 498 (606)
T 3t6q_A 424 LHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNI-----QKTNSLQTLGRLEILVLSFCDLSSIDQHAFTS 498 (606)
T ss_dssp CTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEE-----CSSCGGGGCTTCCEEECTTSCCCEECTTTTTT
T ss_pred cccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCcccc-----ccchhhccCCCccEEECCCCccCccChhhhcc
Confidence 9999999999999999999999999999999999999976321 11467889999999999999999999999999
Q ss_pred CcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCC
Q 002376 504 CKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVP 570 (929)
Q Consensus 504 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 570 (929)
+++|++|+|++|++++.+|..+..++.| .|||++|++++.+|..+..+++|+.|++++|++++..+
T Consensus 499 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 499 LKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp CTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred ccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 9999999999999999999999999999 99999999999999999999999999999999998655
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=7.6e-53 Score=506.81 Aligned_cols=465 Identities=22% Similarity=0.187 Sum_probs=407.1
Q ss_pred cEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceeccc
Q 002376 72 RVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLM 151 (929)
Q Consensus 72 ~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 151 (929)
+++.|+|++|.+++..|..|.++++|++|+|++|.+++..|.+|+++++|++|+|++|.+++..|..|+++++|++|+|+
T Consensus 57 ~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 136 (606)
T 3vq2_A 57 ELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVA 136 (606)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECC
T ss_pred cCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCC
Confidence 78999999999998888899999999999999999999999999999999999999999998888999999999999999
Q ss_pred ccccCC-CCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCccc----EEEeecccCCCccCCccccCCCC
Q 002376 152 ANKITG-RVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLK----VLDLTINRLAGTVPSTIYNMTSL 226 (929)
Q Consensus 152 ~N~l~~-~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L 226 (929)
+|++++ .+|.. |+++++|++|+|++|++++..| ..|+.+++|+ .|++++|+++++.+..+... +|
T Consensus 137 ~n~l~~~~lp~~-~~~l~~L~~L~Ls~n~l~~~~~--------~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L 206 (606)
T 3vq2_A 137 HNFIHSCKLPAY-FSNLTNLVHVDLSYNYIQTITV--------NDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KL 206 (606)
T ss_dssp SSCCCCCCCCGG-GGTCTTCCEEECCSSCCCEECT--------TTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EE
T ss_pred CCcccceechHh-HhhcCCCCEEEccCCcceecCh--------hhhhhhhccccccceeeccCCCcceeCcccccCc-ee
Confidence 999985 45655 9999999999999999866444 3445555554 89999999997777666655 89
Q ss_pred ceEEeeecCCCCcCCcccccCCCCcceeec---------------------------------cCCcCCCCCCCcccccc
Q 002376 227 VHLRLASNQLGGEIPYDVRDTLPNLLDFIY---------------------------------CFNRFTGKIPGSLHNLT 273 (929)
Q Consensus 227 ~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l---------------------------------~~N~l~~~~p~~~~~l~ 273 (929)
++|+|++|.+++.........++.++.+.+ ..|.+++.+|. +..++
T Consensus 207 ~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~ 285 (606)
T 3vq2_A 207 HELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLA 285 (606)
T ss_dssp EEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGT
T ss_pred eeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCC
Confidence 999999998874333333334555554444 67788888887 99999
Q ss_pred cccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccc
Q 002376 274 NIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSN 353 (929)
Q Consensus 274 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 353 (929)
+|+.|++++|.+.. +| .+..+++|+.|++++|.+..++ .+ .+++|++|++++|+..+.+ .++.++
T Consensus 286 ~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l~~lp---------~~-~l~~L~~L~l~~n~~~~~~--~~~~l~- 350 (606)
T 3vq2_A 286 NVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQLKQFP---------TL-DLPFLKSLTLTMNKGSISF--KKVALP- 350 (606)
T ss_dssp TCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCCSSCC---------CC-CCSSCCEEEEESCSSCEEC--CCCCCT-
T ss_pred CCCEEEecCccchh-hh-hccccccCCEEEcccccCcccc---------cC-CCCccceeeccCCcCccch--hhccCC-
Confidence 99999999999974 56 8999999999999999996543 34 7899999999999766555 455666
Q ss_pred cccEEEecCCccccc--cCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCc-ccccCCCCCcee
Q 002376 354 ELSKLYLGGNHIYGK--IPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIP-NSLANLKKLNQI 430 (929)
Q Consensus 354 ~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L 430 (929)
+|++|++++|++++. .|..+..+++|++|+|++|.+++ +|..+..+++|++|++++|++.+..| ..+.++++|++|
T Consensus 351 ~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 429 (606)
T 3vq2_A 351 SLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYL 429 (606)
T ss_dssp TCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEE
T ss_pred CCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEE
Confidence 899999999999977 48889999999999999999985 67899999999999999999998888 789999999999
Q ss_pred cccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCccee
Q 002376 431 DLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEEL 510 (929)
Q Consensus 431 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L 510 (929)
++++|++++..|..|.++++|++|++++|++++.+ +|..+..+++|++|||++|++++..|..|.++++|++|
T Consensus 430 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-------~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 502 (606)
T 3vq2_A 430 DISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNT-------LSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLL 502 (606)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGE-------ECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcc-------hHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEE
Confidence 99999999999999999999999999999998742 16677889999999999999999999999999999999
Q ss_pred ecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCC-CCCeEeCCCCcCcccCCC
Q 002376 511 LMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQ-ALRSLNLTFNNLEGVVPS 571 (929)
Q Consensus 511 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~ 571 (929)
+|++|++++.+|..|..+++|++|||++|+++ .+|..+..++ +|++|++++|++.+..+.
T Consensus 503 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 503 NMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp ECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred ECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 99999999999999999999999999999999 5777799997 599999999999987664
No 12
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-51 Score=510.49 Aligned_cols=497 Identities=20% Similarity=0.181 Sum_probs=375.0
Q ss_pred EEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCc-ccccccccccceeccccc
Q 002376 75 GLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGEL-PVNISKLTELKMLDLMAN 153 (929)
Q Consensus 75 ~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N 153 (929)
..|.++++++ .+|. -.++|++|||++|.+++..|..|.++++|++|||++|.+.+.+ |..|.++++|++|+|++|
T Consensus 8 ~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 8 IAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 4566778887 5666 4589999999999999999999999999999999999777666 789999999999999999
Q ss_pred ccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccC-CccccCCCCceEEee
Q 002376 154 KITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVP-STIYNMTSLVHLRLA 232 (929)
Q Consensus 154 ~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls 232 (929)
+|++ ++++.|.++++|++|+|++|.+++.+|.. ..|+.+++|++|+|++|++++..+ ..|.++++|++|+|+
T Consensus 84 ~l~~-~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~------~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls 156 (844)
T 3j0a_A 84 KIYF-LHPDAFQGLFHLFELRLYFCGLSDAVLKD------GYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFS 156 (844)
T ss_dssp CCCE-ECTTSSCSCSSCCCEECTTCCCSSCCSTT------CCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEE
T ss_pred cCcc-cCHhHccCCcccCEeeCcCCCCCcccccC------ccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECC
Confidence 9985 55556999999999999999997765532 247889999999999999998766 579999999999999
Q ss_pred ecCCCCcCCcccccCC--CCcceeeccCCcCCCCCCCccccccc------ccEEeccCccCcCCccCCCCCC---Cccce
Q 002376 233 SNQLGGEIPYDVRDTL--PNLLDFIYCFNRFTGKIPGSLHNLTN------IQIIRMTHNLLEGTLPPGLGNL---PFLRT 301 (929)
Q Consensus 233 ~N~l~~~ip~~~~~~l--~~L~~l~l~~N~l~~~~p~~~~~l~~------L~~L~Ls~N~l~~~~p~~~~~l---~~L~~ 301 (929)
+|++++..|..+.. + ++|+.|+++.|.+++..|..+..+.+ |+.|++++|.+++..+..+... +.++.
T Consensus 157 ~N~i~~~~~~~l~~-l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~ 235 (844)
T 3j0a_A 157 SNQIFLVCEHELEP-LQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFS 235 (844)
T ss_dssp SSCCCCCCSGGGHH-HHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSE
T ss_pred CCcCCeeCHHHccc-ccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccc
Confidence 99999877776654 5 89999999999999999988877766 9999999999998877766543 44555
Q ss_pred eccccccccCCCCCCCC--ccccccCCC--CCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCC
Q 002376 302 YNIGFNKIVSSGDDEGL--SFITSLTNS--THLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLR 377 (929)
Q Consensus 302 L~L~~N~i~~~~~~~~~--~~~~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 377 (929)
+.++.+.+........+ .....|.++ ++|+.|+|++|.+.+..|..+..+. +|+.|+|++|++++..|..|.+++
T Consensus 236 L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l~ 314 (844)
T 3j0a_A 236 LILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLK-DLKVLNLAYNKINKIADEAFYGLD 314 (844)
T ss_dssp EECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCC-CCCEEEEESCCCCEECTTTTTTCS
T ss_pred eecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCC-CCCEEECCCCcCCCCChHHhcCCC
Confidence 55553322111000000 000122222 5666667766666666566665555 566677777766666666666666
Q ss_pred cccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceeccc
Q 002376 378 SLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLS 457 (929)
Q Consensus 378 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 457 (929)
+|++|+|++|++++..|..|..+++|++|++++|++++..+..|.++++|++|+|++|.+++. + .+++|+.|+++
T Consensus 315 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-~----~~~~L~~L~l~ 389 (844)
T 3j0a_A 315 NLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-H----FIPSIPDIFLS 389 (844)
T ss_dssp SCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-S----SCCSCSEEEEE
T ss_pred CCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-c----CCCCcchhccC
Confidence 677777777666666666666666677777776666666666666666666666666666532 1 14455555555
Q ss_pred CCcCCCCCCCCc------------cc--CCchhhhcccCccEEEecCCCCCCCCCc-chhcCcCcceeeccccccc----
Q 002376 458 NNRINGNIPKGI------------LR--PLPEEISRLENVVTIDLSDNSLSGNLPN-SLKNCKSLEELLMAYNQFS---- 518 (929)
Q Consensus 458 ~N~l~g~i~~~~------------~~--~~p~~~~~l~~L~~LdLs~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~---- 518 (929)
+|+++ .+|... +. ..+..+..+++|+.|||++|++++..+. .+..+++|+.|+|++|.++
T Consensus 390 ~N~l~-~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~ 468 (844)
T 3j0a_A 390 GNKLV-TLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWE 468 (844)
T ss_dssp SCCCC-CCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCC
T ss_pred CCCcc-cccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccc
Confidence 55554 222211 00 1134466889999999999999976554 4567899999999999997
Q ss_pred -ccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCCCCCCCCCCCcccccCCCCCcC
Q 002376 519 -GPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVHLKGNPKLCL 591 (929)
Q Consensus 519 -~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~N~~~c~ 591 (929)
+..|..|..+++|++|||++|+|++.+|..|.++++|+.|+|++|+|++.+|.... ++++.+++++|.....
T Consensus 469 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l~~~ 541 (844)
T 3j0a_A 469 TELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQLLAP 541 (844)
T ss_dssp SCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECCCCC
T ss_pred cccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh-ccccEEECCCCcCCCC
Confidence 45567799999999999999999999999999999999999999999987765533 7899999999986653
No 13
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=3.3e-52 Score=495.18 Aligned_cols=483 Identities=19% Similarity=0.213 Sum_probs=300.2
Q ss_pred CCCCcceeeCCCC-----------CcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeC
Q 002376 58 PCTWPGVICNNFG-----------NRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNI 126 (929)
Q Consensus 58 ~c~w~gv~c~~~~-----------~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 126 (929)
.|.|.|+ |+..+ .+++.|+|++|.+++..|..|.++++|++|+|++|++++..|.+|+++++|++|||
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5899998 86432 25667777777777666667777777777777777777666677777777777777
Q ss_pred CCCCCCCCcccccccccccceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEE
Q 002376 127 SFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLD 206 (929)
Q Consensus 127 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~ 206 (929)
++|++++..|..|+++++|++|+|++|++++.-.+..++++++|++|++++|.+.+.+ .+..|.++++|++|+
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~-------~~~~~~~l~~L~~L~ 154 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEI-------RRIDFAGLTSLNELE 154 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEE-------CTTTTTTCCEEEEEE
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCcccccc-------CHhhhhcccccCeee
Confidence 7777776666667777777777777777764211223667777777777777643322 234566677777777
Q ss_pred eecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCC--C-CcccccccccEEeccCc
Q 002376 207 LTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKI--P-GSLHNLTNIQIIRMTHN 283 (929)
Q Consensus 207 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~--p-~~~~~l~~L~~L~Ls~N 283 (929)
|++|++++..|..|.++++|++|+++.|.+. .+|..+...+++|++|++++|++++.. | .....+++|+.|++++|
T Consensus 155 L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n 233 (549)
T 2z81_A 155 IKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGS 233 (549)
T ss_dssp EEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESC
T ss_pred ccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceecccc
Confidence 7777777777777777777777777777665 455555555677777777777776642 1 12234566777777777
Q ss_pred cCcCCcc----CCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccc-----cCchhhhcccc
Q 002376 284 LLEGTLP----PGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGK-----IPESIGNFSNE 354 (929)
Q Consensus 284 ~l~~~~p----~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-----~p~~~~~~~~~ 354 (929)
.+++..+ ..+..++.|+.+++++|.+......... ....+..+.+|+.|+++++.+... ++.. .....+
T Consensus 234 ~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~-~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~-~~~~~~ 311 (549)
T 2z81_A 234 VLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPS-ESDVVSELGKVETVTIRRLHIPQFYLFYDLSTV-YSLLEK 311 (549)
T ss_dssp EEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCC-TTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHH-HHHSTT
T ss_pred ccchhHHHHHHHHhhhhcccccccccccccccccccccc-chhhhhhhcccccccccccccchhhhcccchhh-hhhccc
Confidence 6665332 3345566677777777766554322111 112344556667777766655421 1111 122235
Q ss_pred ccEEEecCCccccccCCCC-CCCCcccEEEeeCCCCCcccC---ccccCCCCCCEEEecCCcCCCCCc--ccccCCCCCc
Q 002376 355 LSKLYLGGNHIYGKIPASI-GRLRSLTLLDLSYNSISGEIP---IEIGQLQGLQVLGLAGNEIPGGIP--NSLANLKKLN 428 (929)
Q Consensus 355 L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~ 428 (929)
|+.|++++|++. .+|..+ ..+++|++|+|++|++++.+| ..++.+++|++|+|++|++++..+ ..+..+++|+
T Consensus 312 L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~ 390 (549)
T 2z81_A 312 VKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLT 390 (549)
T ss_dssp CCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCC
T ss_pred ceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCC
Confidence 777777777765 344443 456777777777777766553 235666777777777777765432 4466667777
Q ss_pred eecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcc
Q 002376 429 QIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLE 508 (929)
Q Consensus 429 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~ 508 (929)
+||+++|+++ .+|..+..+++|++|++++|++++ +|. .+ .++|++|||++|++++.+ .++++|+
T Consensus 391 ~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~--------~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~ 454 (549)
T 2z81_A 391 SLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKT--------CI--PQTLEVLDVSNNNLDSFS----LFLPRLQ 454 (549)
T ss_dssp EEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCT--------TS--CTTCSEEECCSSCCSCCC----CCCTTCC
T ss_pred EEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccc--------hh--cCCceEEECCCCChhhhc----ccCChhc
Confidence 7777777776 456666666777777777777652 221 11 135667777777766542 3566677
Q ss_pred eeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCC
Q 002376 509 ELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVP 570 (929)
Q Consensus 509 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 570 (929)
+|+|++|+|+ .+|. ...+++|++|||++|++++.+|..+..+++|+.|++++|++++..|
T Consensus 455 ~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 455 ELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp EEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred EEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 7777777776 4444 3456667777777777776666666666777777777766665544
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.1e-51 Score=488.08 Aligned_cols=487 Identities=21% Similarity=0.232 Sum_probs=312.3
Q ss_pred cEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceeccc
Q 002376 72 RVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLM 151 (929)
Q Consensus 72 ~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 151 (929)
+++.|||++|.+++..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 56777777777776666677777777777777777777667777777777777777777776666777777777777777
Q ss_pred ccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCC----c
Q 002376 152 ANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSL----V 227 (929)
Q Consensus 152 ~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L----~ 227 (929)
+|+++ .++...|+++++|++|+|++|.+.+. -+|..|+++++|++|++++|++++..|..|..+++| +
T Consensus 109 ~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~-------~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~ 180 (570)
T 2z63_A 109 ETNLA-SLENFPIGHLKTLKELNVAHNLIQSF-------KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL 180 (570)
T ss_dssp TSCCC-CSTTCSCTTCTTCCEEECCSSCCCCC-------CCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCC
T ss_pred ccccc-cCCCccccccccccEEecCCCcccee-------cChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhh
Confidence 77776 45554477777777777777776431 023445667777777777777777777777777777 6
Q ss_pred eEEeeecCCCCcCCcccccCCCCcceeeccCCcCCC-CCCCcccccccccEEeccCccCc------CCccCCCCCCCc--
Q 002376 228 HLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTG-KIPGSLHNLTNIQIIRMTHNLLE------GTLPPGLGNLPF-- 298 (929)
Q Consensus 228 ~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~------~~~p~~~~~l~~-- 298 (929)
+|++++|.+++. +...+... +|+.+++++|.... .++..+.++++++.+++..+.+. ......|..+++
T Consensus 181 ~L~l~~n~l~~~-~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~ 258 (570)
T 2z63_A 181 SLDLSLNPMNFI-QPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLT 258 (570)
T ss_dssp EEECTTCCCCEE-CTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSE
T ss_pred hcccCCCCceec-CHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccc
Confidence 777777777743 33333323 67777777664321 23333444444444433322111 111122333322
Q ss_pred cceeccccc-cccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCC
Q 002376 299 LRTYNIGFN-KIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLR 377 (929)
Q Consensus 299 L~~L~L~~N-~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 377 (929)
++.++++.| .+.... +..+..+++|++|++++|.++ .+|..+... +|++|++++|.+. .+|. ..++
T Consensus 259 l~~l~l~~~~~~~~~~-------~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~--~L~~L~l~~n~~~-~l~~--~~l~ 325 (570)
T 2z63_A 259 IEEFRLAYLDYYLDDI-------IDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF--GWQHLELVNCKFG-QFPT--LKLK 325 (570)
T ss_dssp EEEEEEEETTEEESCS-------TTTTGGGTTCSEEEEESCEEC-SCCBCCSCC--CCSEEEEESCBCS-SCCB--CBCS
T ss_pred hhhhhhhcchhhhhhc-------hhhhcCcCcccEEEecCccch-hhhhhhccC--CccEEeeccCccc-ccCc--cccc
Confidence 233334333 222211 134555667777777777776 466666555 5777777777766 3343 3566
Q ss_pred cccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCC--cccccCCCCCceecccCcccccccCcccccccccceec
Q 002376 378 SLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGI--PNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSID 455 (929)
Q Consensus 378 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 455 (929)
+|+.|++++|.+.+..+. ..+++|++|++++|++++.. |..+.++++|++|++++|.+++..+. |..+++|+.|+
T Consensus 326 ~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~ 402 (570)
T 2z63_A 326 SLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLD 402 (570)
T ss_dssp SCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEE
T ss_pred ccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEE
Confidence 777777777776655544 56677777777777776543 56666777777777777777654443 66777777777
Q ss_pred ccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeeccccccc-ccCCccccCCCCCCEE
Q 002376 456 LSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFS-GPIPNIVAELKGLEVL 534 (929)
Q Consensus 456 Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L 534 (929)
+++|++++..+ +..+..+++|++|++++|.+++..|..|.++++|++|++++|+++ +.+|..+..+++|++|
T Consensus 403 l~~n~l~~~~~-------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 475 (570)
T 2z63_A 403 FQHSNLKQMSE-------FSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 475 (570)
T ss_dssp CTTSEEESCTT-------SCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred ccCCccccccc-------hhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEE
Confidence 77777665432 134556667777777777777777777777777777777777776 4667777777777777
Q ss_pred ECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCCCC-CCCCCCCcccccCCCCCcC
Q 002376 535 DLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSE-GIFRNMSNVHLKGNPKLCL 591 (929)
Q Consensus 535 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~~~l~~l~l~~N~~~c~ 591 (929)
+|++|++++..|..+.++++|++|++++|++++.+|.. ..+++++.+++++|++.|.
T Consensus 476 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 533 (570)
T 2z63_A 476 DLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 533 (570)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCC
Confidence 77777777666777777777777777777777765543 3456667777777777663
No 15
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-50 Score=480.08 Aligned_cols=467 Identities=21% Similarity=0.216 Sum_probs=399.2
Q ss_pred cEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceeccc
Q 002376 72 RVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLM 151 (929)
Q Consensus 72 ~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 151 (929)
+++.|+|++|.+++..+..|+++++|++|+|++|++++..|.+|+++++|++|+|++|++++..+..|+++++|++|+|+
T Consensus 53 ~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~ 132 (570)
T 2z63_A 53 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVA 132 (570)
T ss_dssp SCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECC
T ss_pred CceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecC
Confidence 68899999999998778889999999999999999998888999999999999999999998777789999999999999
Q ss_pred ccccCC-CCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcc----cEEEeecccCCCccCCccccCCCC
Q 002376 152 ANKITG-RVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENL----KVLDLTINRLAGTVPSTIYNMTSL 226 (929)
Q Consensus 152 ~N~l~~-~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L----~~L~Ls~N~l~~~~p~~~~~l~~L 226 (929)
+|.+++ .+|.. |+++++|++|++++|++++. .|..|+.+++| +.|++++|++++..|..|..+ +|
T Consensus 133 ~n~l~~~~lp~~-~~~l~~L~~L~l~~n~l~~~--------~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L 202 (570)
T 2z63_A 133 HNLIQSFKLPEY-FSNLTNLEHLDLSSNKIQSI--------YCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RL 202 (570)
T ss_dssp SSCCCCCCCCGG-GGGCTTCCEEECTTSCCCEE--------CGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EE
T ss_pred CCccceecChhh-hcccCCCCEEeCcCCcccee--------cHHHccchhccchhhhhcccCCCCceecCHHHhccC-cc
Confidence 999985 35655 99999999999999988543 34556667777 899999999999999888776 89
Q ss_pred ceEEeeecCCCCcCCcccccCCCCcceeeccCCcC------CCCCCCcccccc--cccEEeccCc-cCcCCccCCCCCCC
Q 002376 227 VHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRF------TGKIPGSLHNLT--NIQIIRMTHN-LLEGTLPPGLGNLP 297 (929)
Q Consensus 227 ~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l------~~~~p~~~~~l~--~L~~L~Ls~N-~l~~~~p~~~~~l~ 297 (929)
++|+|++|......-......+++++...+..+.+ .......+..+. .++.+++++| .+.+..|..|..++
T Consensus 203 ~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~ 282 (570)
T 2z63_A 203 HKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLT 282 (570)
T ss_dssp EEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGT
T ss_pred eeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcC
Confidence 99999999655322223333466666555543322 222223344443 3677888888 88888999999999
Q ss_pred ccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCC
Q 002376 298 FLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLR 377 (929)
Q Consensus 298 ~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 377 (929)
+|+.|++++|.+..++ ..+..+ +|++|++++|.+. .+|. ..++ +|+.|++++|.+.+..+. ..++
T Consensus 283 ~L~~L~l~~~~l~~l~--------~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~-~L~~L~l~~n~~~~~~~~--~~~~ 347 (570)
T 2z63_A 283 NVSSFSLVSVTIERVK--------DFSYNF-GWQHLELVNCKFG-QFPT--LKLK-SLKRLTFTSNKGGNAFSE--VDLP 347 (570)
T ss_dssp TCSEEEEESCEECSCC--------BCCSCC-CCSEEEEESCBCS-SCCB--CBCS-SCCEEEEESCBSCCBCCC--CBCT
T ss_pred cccEEEecCccchhhh--------hhhccC-CccEEeeccCccc-ccCc--cccc-ccCEEeCcCCcccccccc--ccCC
Confidence 9999999999998654 345667 9999999999998 6776 3444 799999999999877665 7899
Q ss_pred cccEEEeeCCCCCccc--CccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccC-ccccccccccee
Q 002376 378 SLTLLDLSYNSISGEI--PIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIP-ISFGNFQSLLSI 454 (929)
Q Consensus 378 ~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L 454 (929)
+|++|++++|++++.. |..+..+++|++|++++|.+++..+. +..+++|++|++++|++++..| ..|.++++|++|
T Consensus 348 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 426 (570)
T 2z63_A 348 SLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 426 (570)
T ss_dssp TCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEE
T ss_pred CCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEE
Confidence 9999999999998664 77889999999999999999875554 9999999999999999998766 578999999999
Q ss_pred cccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCC-CCCCcchhcCcCcceeecccccccccCCccccCCCCCCE
Q 002376 455 DLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLS-GNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEV 533 (929)
Q Consensus 455 ~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 533 (929)
++++|++++.+ |..+..+++|++|+|++|.++ +.+|..+..+++|++|+|++|++++.+|..|..+++|++
T Consensus 427 ~l~~n~l~~~~--------~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 498 (570)
T 2z63_A 427 DISHTHTRVAF--------NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 498 (570)
T ss_dssp ECTTSCCEECC--------TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred eCcCCcccccc--------hhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCE
Confidence 99999998654 667888999999999999998 678999999999999999999999999999999999999
Q ss_pred EECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCCCC
Q 002376 534 LDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSE 572 (929)
Q Consensus 534 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 572 (929)
|+|++|++++..|..+.++++|+.|++++|+++|.+|..
T Consensus 499 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 499 LNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp EECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred EeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 999999999988889999999999999999999988864
No 16
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=8e-50 Score=474.59 Aligned_cols=488 Identities=17% Similarity=0.205 Sum_probs=401.4
Q ss_pred eeCCCCCcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccc
Q 002376 65 ICNNFGNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTE 144 (929)
Q Consensus 65 ~c~~~~~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 144 (929)
.|.+.+ | .|+++++++ .+|+.+. ++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|.++++
T Consensus 3 ~C~~~~--~--c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 75 (549)
T 2z81_A 3 SCDASG--V--CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGS 75 (549)
T ss_dssp EECTTS--E--EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred cCCCCc--e--EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhcccccc
Confidence 577643 3 799999998 7888775 89999999999999999999999999999999999999988899999999
Q ss_pred cceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCcc-CCccccC
Q 002376 145 LKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTV-PSTIYNM 223 (929)
Q Consensus 145 L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l 223 (929)
|++|||++|+++ .+++..|+++++|++|+|++|++++. -.|..|+++++|++|+|++|++.+.+ +..|.++
T Consensus 76 L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~-------~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l 147 (549)
T 2z81_A 76 LEHLDLSDNHLS-SLSSSWFGPLSSLKYLNLMGNPYQTL-------GVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGL 147 (549)
T ss_dssp CCEEECTTSCCC-SCCHHHHTTCTTCCEEECTTCCCSSS-------CSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC
T ss_pred CCEEECCCCccC-ccCHHHhccCCCCcEEECCCCccccc-------chhhhhhccCCccEEECCCCccccccCHhhhhcc
Confidence 999999999998 56777799999999999999998642 12456788999999999999954444 4789999
Q ss_pred CCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCc--c-CCCCCCCccc
Q 002376 224 TSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTL--P-PGLGNLPFLR 300 (929)
Q Consensus 224 ~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p-~~~~~l~~L~ 300 (929)
++|++|+|++|++++.+|..+.. +++|+.|+++.|.+....+..+..+++|+.|++++|++++.. | .....+++|+
T Consensus 148 ~~L~~L~L~~n~l~~~~~~~l~~-l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~ 226 (549)
T 2z81_A 148 TSLNELEIKALSLRNYQSQSLKS-IRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMK 226 (549)
T ss_dssp CEEEEEEEEETTCCEECTTTTTT-CSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCC
T ss_pred cccCeeeccCCcccccChhhhhc-cccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhccc
Confidence 99999999999999888877765 899999999999986543334467899999999999999752 2 3345688999
Q ss_pred eeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccC------chhhhccccccEEEecCCcccccc-----
Q 002376 301 TYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIP------ESIGNFSNELSKLYLGGNHIYGKI----- 369 (929)
Q Consensus 301 ~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p------~~~~~~~~~L~~L~Ls~N~l~~~~----- 369 (929)
.|++++|.+...... .....+..+++|+.|++++|.+.+... ..+..+. +|+.|+++++.+....
T Consensus 227 ~L~l~~n~l~~~~~~---~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~-~L~~L~l~~~~i~~~~~~~~l 302 (549)
T 2z81_A 227 KLAFRGSVLTDESFN---ELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELG-KVETVTIRRLHIPQFYLFYDL 302 (549)
T ss_dssp EEEEESCEEEHHHHH---HHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCT-TCCEEEEESCBCSCGGGSCCC
T ss_pred ceeccccccchhHHH---HHHHHhhhhccccccccccccccccccccccchhhhhhhc-ccccccccccccchhhhcccc
Confidence 999999988642110 112345677899999999999876321 1223344 7999999999876421
Q ss_pred CCCCCCCCcccEEEeeCCCCCcccCccc-cCCCCCCEEEecCCcCCCCCcc---cccCCCCCceecccCcccccccC--c
Q 002376 370 PASIGRLRSLTLLDLSYNSISGEIPIEI-GQLQGLQVLGLAGNEIPGGIPN---SLANLKKLNQIDLSGNELTGEIP--I 443 (929)
Q Consensus 370 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~p--~ 443 (929)
+..+....+|+.|++++|+++ .+|..+ ..+++|++|++++|++++.+|. .+..+++|++|+|++|++++..+ .
T Consensus 303 ~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 381 (549)
T 2z81_A 303 STVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGE 381 (549)
T ss_dssp CHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHH
T ss_pred hhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchh
Confidence 111233568999999999998 677766 5799999999999999987653 47889999999999999986543 5
Q ss_pred ccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCc
Q 002376 444 SFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPN 523 (929)
Q Consensus 444 ~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 523 (929)
.+..+++|++|++++|+++ .+ |..+..+++|++|+|++|++++ +|..+ .++|++|+|++|+|++.+
T Consensus 382 ~~~~l~~L~~L~Ls~N~l~-~l--------p~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~-- 447 (549)
T 2z81_A 382 ILLTLKNLTSLDISRNTFH-PM--------PDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS-- 447 (549)
T ss_dssp HGGGCTTCCEEECTTCCCC-CC--------CSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC--
T ss_pred hhhcCCCCCEEECCCCCCc-cC--------ChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc--
Confidence 6889999999999999997 34 6667788999999999999984 44433 268999999999999754
Q ss_pred cccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCCCC-CCCCCCCcccccCCCCCcC
Q 002376 524 IVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSE-GIFRNMSNVHLKGNPKLCL 591 (929)
Q Consensus 524 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~~~l~~l~l~~N~~~c~ 591 (929)
..+++|++|||++|+|+ .+|. ...+++|++|+|++|++++.+|.. ..+++++.+++++||+.|.
T Consensus 448 --~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 448 --LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp --CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred --ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 57899999999999999 6776 567999999999999999988864 5688999999999999883
No 17
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.4e-49 Score=469.16 Aligned_cols=454 Identities=21% Similarity=0.259 Sum_probs=340.5
Q ss_pred EEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccccc
Q 002376 75 GLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANK 154 (929)
Q Consensus 75 ~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 154 (929)
.+|+++++++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|||++|+
T Consensus 4 ~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 80 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80 (520)
T ss_dssp EEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSC
T ss_pred eEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCc
Confidence 4677777777 5776665 777777777777776666777777777777777777777777777777777777777777
Q ss_pred cCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCC--ceEEee
Q 002376 155 ITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSL--VHLRLA 232 (929)
Q Consensus 155 l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~Ls 232 (929)
|+ .+|.. .+++|++|+|++|++++. -.|..|+++++|++|+|++|++++ ..|..+++| ++|+|+
T Consensus 81 l~-~lp~~---~l~~L~~L~L~~N~l~~~-------~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~ 146 (520)
T 2z7x_B 81 LV-KISCH---PTVNLKHLDLSFNAFDAL-------PICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLV 146 (520)
T ss_dssp CC-EEECC---CCCCCSEEECCSSCCSSC-------CCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEE
T ss_pred ee-ecCcc---ccCCccEEeccCCccccc-------cchhhhccCCcceEEEecCcccch---hhccccccceeeEEEee
Confidence 76 45554 677777777777776541 023445566777777777777765 345556666 777777
Q ss_pred ecCC--CCcCCcccccCCCCcceeeccCCcCCCCCCCcccccc-cccEEeccCccCcCCccC-CCCCCCccceecccccc
Q 002376 233 SNQL--GGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLT-NIQIIRMTHNLLEGTLPP-GLGNLPFLRTYNIGFNK 308 (929)
Q Consensus 233 ~N~l--~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~ 308 (929)
+|++ .+.+| ..+..+. +...+++++|.+.+.++. .+.++++|+.+++++|.
T Consensus 147 ~n~l~~~~~~~-------------------------~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 201 (520)
T 2z7x_B 147 LGETYGEKEDP-------------------------EGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVL 201 (520)
T ss_dssp ECTTTTSSCCT-------------------------TTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECC
T ss_pred ccccccccccc-------------------------ccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccc
Confidence 7766 44444 3333332 233445566665554443 45666666666666664
Q ss_pred -------ccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhc--cccccEEEecCCccccccCCCC-----C
Q 002376 309 -------IVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNF--SNELSKLYLGGNHIYGKIPASI-----G 374 (929)
Q Consensus 309 -------i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~--~~~L~~L~Ls~N~l~~~~p~~~-----~ 374 (929)
+.. .+..+..+++|+.|++++|.+++..+..+... ..+|++|++++|+++|.+|..+ +
T Consensus 202 ~~~~~~~~~~--------~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~ 273 (520)
T 2z7x_B 202 EDNKCSYFLS--------ILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGT 273 (520)
T ss_dssp STTTTHHHHH--------HHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSC
T ss_pred cccccceeec--------chhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccc
Confidence 211 11356677888888888888876544333221 1279999999999999999988 9
Q ss_pred CCCcccEEEeeCCCCCcccC-ccccCC---CCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccc
Q 002376 375 RLRSLTLLDLSYNSISGEIP-IEIGQL---QGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQS 450 (929)
Q Consensus 375 ~l~~L~~L~Ls~N~l~~~~p-~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 450 (929)
++++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.+.. .+..+++|++|++++|++++.+|..|.++++
T Consensus 274 ~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 349 (520)
T 2z7x_B 274 SLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTE 349 (520)
T ss_dssp CCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSS
T ss_pred cCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCC
Confidence 999999999999999 455 555555 67999999999987532 1368899999999999999989999999999
Q ss_pred cceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCc-chhcCcCcceeecccccccccCCccccCCC
Q 002376 451 LLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPN-SLKNCKSLEELLMAYNQFSGPIPNIVAELK 529 (929)
Q Consensus 451 L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 529 (929)
|+.|+|++|++++. ..+|..+..+++|++|||++|++++.+|. .+..+++|++|++++|++++.+|..+. +
T Consensus 350 L~~L~L~~N~l~~l------~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~ 421 (520)
T 2z7x_B 350 LETLILQMNQLKEL------SKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--P 421 (520)
T ss_dssp CCEEECCSSCCCBH------HHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--T
T ss_pred CCEEEccCCccCcc------ccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--c
Confidence 99999999999851 12367789999999999999999986665 488899999999999999988887765 7
Q ss_pred CCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCCC-CCCCCCCCcccccCCCCCcC
Q 002376 530 GLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPS-EGIFRNMSNVHLKGNPKLCL 591 (929)
Q Consensus 530 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~~~l~~l~l~~N~~~c~ 591 (929)
+|++|||++|+++ .+|..+..+++|++|++++|++++..+. ...+++++.+++++||+.|.
T Consensus 422 ~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 422 RIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp TCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred cCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCccc
Confidence 9999999999999 7888888999999999999999965444 34578899999999999883
No 18
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.5e-47 Score=461.23 Aligned_cols=486 Identities=19% Similarity=0.197 Sum_probs=345.6
Q ss_pred cEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceeccc
Q 002376 72 RVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLM 151 (929)
Q Consensus 72 ~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 151 (929)
.++.|||++|.+++..+.+|.+|++|++|||++|+|++..|.+|.+|++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 46677777777775555567777777777777777776666667777777777777777776666667777777777777
Q ss_pred ccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCc----
Q 002376 152 ANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLV---- 227 (929)
Q Consensus 152 ~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~---- 227 (929)
+|+|+ .+++..|+++++|++|+|++|++++.. .|..++.+++|++|+|++|+|++..+..|..+.+++
T Consensus 133 ~N~l~-~l~~~~~~~L~~L~~L~Ls~N~l~~~~-------~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~ 204 (635)
T 4g8a_A 133 ETNLA-SLENFPIGHLKTLKELNVAHNLIQSFK-------LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL 204 (635)
T ss_dssp TSCCC-CSTTCCCTTCTTCCEEECCSSCCCCCC-------CCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCC
T ss_pred CCcCC-CCChhhhhcCcccCeeccccCccccCC-------CchhhccchhhhhhcccCccccccccccccchhhhhhhhh
Confidence 77776 455555777777777777777664311 233455667777777777777766666666554433
Q ss_pred eEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCC-CCCcccccccccEEec--------------------------
Q 002376 228 HLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGK-IPGSLHNLTNIQIIRM-------------------------- 280 (929)
Q Consensus 228 ~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~-~p~~~~~l~~L~~L~L-------------------------- 280 (929)
.++++.|.++ .++...+. ...+..+++..|..... .+..+..+..++...+
T Consensus 205 ~~~ls~n~l~-~i~~~~~~-~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~ 282 (635)
T 4g8a_A 205 SLDLSLNPMN-FIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLT 282 (635)
T ss_dssp EEECTTCCCC-EECTTTTT-TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSE
T ss_pred hhhcccCccc-ccCccccc-chhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchh
Confidence 4666666665 34433333 22344455554433321 1122233333333333
Q ss_pred ----cCccCcC---CccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccc
Q 002376 281 ----THNLLEG---TLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSN 353 (929)
Q Consensus 281 ----s~N~l~~---~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 353 (929)
..+.... ..+..+..+.+++.+++..|.+... ..+.....|+.|++++|.+.+..+.. +.
T Consensus 283 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~---------~~~~~~~~L~~L~l~~~~~~~~~~~~---l~- 349 (635)
T 4g8a_A 283 IEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV---------KDFSYNFGWQHLELVNCKFGQFPTLK---LK- 349 (635)
T ss_dssp EEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC---------GGGGSCCCCSEEEEESCEESSCCCCB---CT-
T ss_pred hhhhhhhhhcccccchhhhhhhhcccccccccccccccc---------cccccchhhhhhhcccccccCcCccc---ch-
Confidence 2222111 1122334444555555555555432 23455677888888888887544432 22
Q ss_pred cccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCc--ccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceec
Q 002376 354 ELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISG--EIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQID 431 (929)
Q Consensus 354 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 431 (929)
.|+.++++.|.+... ..+..+++|+.|++++|.+.. ..+..+..+.+|++++++.|.+.. .+..+..+++|+.++
T Consensus 350 ~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~ 426 (635)
T 4g8a_A 350 SLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLD 426 (635)
T ss_dssp TCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEE
T ss_pred hhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchh
Confidence 688888888887643 345678999999999999863 456667788999999999998874 556788899999999
Q ss_pred ccCcccccccC-cccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCC-CCCCCcchhcCcCcce
Q 002376 432 LSGNELTGEIP-ISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSL-SGNLPNSLKNCKSLEE 509 (929)
Q Consensus 432 Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l-~~~~p~~~~~l~~L~~ 509 (929)
++.|+.....+ ..|.++.+++.++++.|.+++.. |..+..++.++.|+|++|++ .+.+|..|..+++|++
T Consensus 427 l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~--------~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~ 498 (635)
T 4g8a_A 427 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAF--------NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 498 (635)
T ss_dssp CTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECC--------TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred hhhcccccccccccccccccccccccccccccccc--------ccccccchhhhhhhhhhcccccccCchhhhhccccCE
Confidence 99988876554 46888999999999999998654 56677888999999999985 4567889999999999
Q ss_pred eecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCCCCC-CC-CCCCcccccCCC
Q 002376 510 LLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEG-IF-RNMSNVHLKGNP 587 (929)
Q Consensus 510 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~-~~l~~l~l~~N~ 587 (929)
|+|++|+|++.+|..|.++++|++|+|++|+|++..|..|.++++|++|||++|+|++.+|..- .+ .+++.+++++||
T Consensus 499 L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np 578 (635)
T 4g8a_A 499 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQND 578 (635)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCC
T ss_pred EECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCC
Confidence 9999999999999999999999999999999999999999999999999999999999988752 23 689999999999
Q ss_pred CCcC
Q 002376 588 KLCL 591 (929)
Q Consensus 588 ~~c~ 591 (929)
+.|.
T Consensus 579 ~~C~ 582 (635)
T 4g8a_A 579 FACT 582 (635)
T ss_dssp BCCS
T ss_pred Cccc
Confidence 9993
No 19
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=5e-48 Score=472.39 Aligned_cols=462 Identities=20% Similarity=0.278 Sum_probs=325.8
Q ss_pred CCCCEEEeecCCCCCCCCcCCCCCCCCcEEeC-CCCCCCCCcccccccc----ccc--ceeccc----------ccccCC
Q 002376 95 SFLRSIQLQNNKLSGNLPREIGNLFRLRVLNI-SFNNLQGELPVNISKL----TEL--KMLDLM----------ANKITG 157 (929)
Q Consensus 95 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L-s~N~l~~~~p~~~~~l----~~L--~~L~Ls----------~N~l~~ 157 (929)
.+++.|+|++|.+.|.+|++|++|++|++||| ++|.++|..|-.-... ..+ +.+... ...+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 46789999999999999999999999999999 8998887754321111 000 000000 000000
Q ss_pred CCChh----------hhccCCCCcEEEccc--cccCCCCCccccccCCCccCCCCcccEEEeecccCCCc-cCCccccCC
Q 002376 158 RVTDD----------QLRNLRSLQVLNFGK--NLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGT-VPSTIYNMT 224 (929)
Q Consensus 158 ~i~~~----------~~~~l~~L~~L~Ls~--N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~ 224 (929)
.++.. .......++.+.++. |+++| + |..|+++++|++|+|++|+|++. +|..+..
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-I--------P~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~-- 471 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-I--------SKAIQRLTKLQIIYFANSPFTYDNIAVDWED-- 471 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-E--------CGGGGGCTTCCEEEEESCCCCGGGBSSSCSC--
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-h--------hHHHhcCCCCCEEECcCCcCCCCcccccccc--
Confidence 00000 001111222222222 33332 2 22334455555555555555541 0000000
Q ss_pred CCceEEeeecCCCCcCCcccc-cCCCCcceeeccCCcCCCCCCCcccccccccEEeccCcc-CcC-CccCCCCCC-----
Q 002376 225 SLVHLRLASNQLGGEIPYDVR-DTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNL-LEG-TLPPGLGNL----- 296 (929)
Q Consensus 225 ~L~~L~Ls~N~l~~~ip~~~~-~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l----- 296 (929)
++.|.++|.+|..+. ..+++|+.|++++|++.+.+|..|.++++|+.|+|++|+ ++| .+|..++++
T Consensus 472 ------~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~ 545 (876)
T 4ecn_A 472 ------ANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDED 545 (876)
T ss_dssp ------TTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTT
T ss_pred ------cccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhccc
Confidence 000111112555542 235556666666666666666666666666666666665 665 555443333
Q ss_pred --CccceeccccccccCCCCCCCCcccc--ccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCC
Q 002376 297 --PFLRTYNIGFNKIVSSGDDEGLSFIT--SLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPAS 372 (929)
Q Consensus 297 --~~L~~L~L~~N~i~~~~~~~~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~ 372 (929)
++|+.|++++|++..++ . .+.++++|++|+|++|+++ .+| .++.+. +|+.|+|++|+++ .+|..
T Consensus 546 ~l~~L~~L~Ls~N~L~~ip--------~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~-~L~~L~Ls~N~l~-~lp~~ 613 (876)
T 4ecn_A 546 TGPKIQIFYMGYNNLEEFP--------ASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNV-KLTDLKLDYNQIE-EIPED 613 (876)
T ss_dssp TTTTCCEEECCSSCCCBCC--------CHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTS-EESEEECCSSCCS-CCCTT
T ss_pred ccCCccEEEeeCCcCCccC--------ChhhhhcCCCCCEEECCCCCcc-cch-hhcCCC-cceEEECcCCccc-cchHH
Confidence 37777777777765432 3 5778889999999999998 888 777776 7999999999999 88999
Q ss_pred CCCCCc-ccEEEeeCCCCCcccCccccCCCC--CCEEEecCCcCCCCCcccc---c--CCCCCceecccCcccccccCcc
Q 002376 373 IGRLRS-LTLLDLSYNSISGEIPIEIGQLQG--LQVLGLAGNEIPGGIPNSL---A--NLKKLNQIDLSGNELTGEIPIS 444 (929)
Q Consensus 373 ~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~p~~~---~--~l~~L~~L~Ls~N~l~~~~p~~ 444 (929)
+.++++ |++|+|++|+++ .+|..+..++. |+.|+|++|++.+.+|... . .+++|+.|+|++|+++. +|..
T Consensus 614 l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~-lp~~ 691 (876)
T 4ecn_A 614 FCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQK-FPTE 691 (876)
T ss_dssp SCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCS-CCHH
T ss_pred HhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCc-cCHH
Confidence 999999 999999999999 78888887755 9999999999998776433 2 34589999999999994 5554
Q ss_pred -cccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchh--cCcCcceeecccccccccC
Q 002376 445 -FGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLK--NCKSLEELLMAYNQFSGPI 521 (929)
Q Consensus 445 -~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~ 521 (929)
+..+++|+.|+|++|+|+ .+|...+...+....++++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +
T Consensus 692 ~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-l 768 (876)
T 4ecn_A 692 LFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-F 768 (876)
T ss_dssp HHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-C
T ss_pred HHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-c
Confidence 558999999999999998 7777665544434556679999999999999 7888887 99999999999999998 7
Q ss_pred CccccCCCCCCEEECCC------CcCCCcCCcccccCCCCCeEeCCCCcCcccCCCCCCCCCCCcccccCCCCCcCC
Q 002376 522 PNIVAELKGLEVLDLSS------NKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVHLKGNPKLCLQ 592 (929)
Q Consensus 522 p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~N~~~c~~ 592 (929)
|..+..+++|+.|+|++ |++.+.+|..+.++++|+.|+|++|++ +.+|.. .+++++.+++++|+.....
T Consensus 769 p~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~-l~~~L~~LdLs~N~l~~i~ 843 (876)
T 4ecn_A 769 PTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEK-LTPQLYILDIADNPNISID 843 (876)
T ss_dssp CCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCSSSCEEECCSCTTCEEE
T ss_pred chhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHh-hcCCCCEEECCCCCCCccC
Confidence 88999999999999977 889999999999999999999999999 777776 4579999999999976543
No 20
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.2e-48 Score=457.56 Aligned_cols=439 Identities=18% Similarity=0.215 Sum_probs=290.5
Q ss_pred CcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecc
Q 002376 71 NRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDL 150 (929)
Q Consensus 71 ~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 150 (929)
.+++.|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|||++|+|+ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 57899999999999888889999999999999999999998999999999999999999999 57766 8999999999
Q ss_pred cccccCC-CCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcc--cEEEeecccC--CCccCCccccCC-
Q 002376 151 MANKITG-RVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENL--KVLDLTINRL--AGTVPSTIYNMT- 224 (929)
Q Consensus 151 s~N~l~~-~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L--~~L~Ls~N~l--~~~~p~~~~~l~- 224 (929)
++|++++ .+|.. |+++++|++|+|++|++.+ ..|..+++| +.|+|++|++ .+..|..|..+.
T Consensus 98 ~~N~l~~~~~p~~-~~~l~~L~~L~L~~n~l~~-----------~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~ 165 (520)
T 2z7x_B 98 SFNAFDALPICKE-FGNMSQLKFLGLSTTHLEK-----------SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNT 165 (520)
T ss_dssp CSSCCSSCCCCGG-GGGCTTCCEEEEEESSCCG-----------GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCE
T ss_pred cCCccccccchhh-hccCCcceEEEecCcccch-----------hhccccccceeeEEEeeccccccccccccccccccc
Confidence 9999986 34454 9999999999999998854 235667777 9999999999 888999888876
Q ss_pred CCceEEeeecCCCCcCCcccccCCCCcceeeccCCc-------CCCCCCCcccccccccEEeccCccCcCCccCCCCCCC
Q 002376 225 SLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNR-------FTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLP 297 (929)
Q Consensus 225 ~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~-------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 297 (929)
+...+++++|++.+.++...+..+++|+.++++.|. +.+.+| .+..+++|+.|++++|.+++..+..+..
T Consensus 166 ~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~-- 242 (520)
T 2z7x_B 166 ESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQ-- 242 (520)
T ss_dssp EEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHH--
T ss_pred ceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHH--
Confidence 455678889998888877777777888888888776 666555 6677777777777777666432211100
Q ss_pred ccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchh-----hhccccccEEEecCCccccccC-C
Q 002376 298 FLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESI-----GNFSNELSKLYLGGNHIYGKIP-A 371 (929)
Q Consensus 298 ~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-----~~~~~~L~~L~Ls~N~l~~~~p-~ 371 (929)
....++|++|++++|+++|.+|..+ ..+. .|+.+++++|.+ .+| .
T Consensus 243 --------------------------~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~-~L~~l~l~~n~~--~~p~~ 293 (520)
T 2z7x_B 243 --------------------------LVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLK-ALSIHQVVSDVF--GFPQS 293 (520)
T ss_dssp --------------------------HHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCC-EEEEEEEEECCC--CSCTH
T ss_pred --------------------------HhhhCcccEEEeecccccCccccchhhcccccCc-eeEeccccccce--ecchh
Confidence 0012344455555555544444444 3333 455555555544 222 2
Q ss_pred CCCCC---CcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCccccc--ccCcccc
Q 002376 372 SIGRL---RSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTG--EIPISFG 446 (929)
Q Consensus 372 ~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~ 446 (929)
.+..+ .+|+.|++++|.+.+.. .+..+++|++|++++|++++.+|..+.++++|++|+|++|++++ .+|..|.
T Consensus 294 ~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~ 371 (520)
T 2z7x_B 294 YIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTT 371 (520)
T ss_dssp HHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHT
T ss_pred hhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHh
Confidence 22222 34555555555544221 11345555555555555555555555555555555555555554 3344455
Q ss_pred cccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCcccc
Q 002376 447 NFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVA 526 (929)
Q Consensus 447 ~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 526 (929)
++++|++|++++|++++.+|.+ .+..+++|++|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|..+.
T Consensus 372 ~l~~L~~L~Ls~N~l~~~l~~~-------~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~ 441 (520)
T 2z7x_B 372 QMKSLQQLDISQNSVSYDEKKG-------DCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVV 441 (520)
T ss_dssp TCTTCCEEECCSSCCBCCGGGC-------SCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGG
T ss_pred hCCCCCEEECCCCcCCcccccc-------hhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhh
Confidence 5555555555555555434221 133445556666666666555554443 56666666666666 4555555
Q ss_pred CCCCCCEEECCCCcCCCcCCc-ccccCCCCCeEeCCCCcCcccC
Q 002376 527 ELKGLEVLDLSSNKLSGSIPS-DLQNLQALRSLNLTFNNLEGVV 569 (929)
Q Consensus 527 ~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~ 569 (929)
.+++|++|+|++|++++ +|. .+..+++|++|++++|++++..
T Consensus 442 ~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 442 KLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp GCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCcccC
Confidence 66666666666666663 443 3666667777777777766543
No 21
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.3e-46 Score=445.68 Aligned_cols=458 Identities=19% Similarity=0.223 Sum_probs=348.9
Q ss_pred EEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceeccccc
Q 002376 74 IGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMAN 153 (929)
Q Consensus 74 ~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 153 (929)
..+|++++++++ +|..+. ++|++|+|++|++++..|..|.++++|++|+|++|+|++..|..|.++++|++|||++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 678999999995 887775 89999999999999888889999999999999999999888999999999999999999
Q ss_pred ccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCC--ceEEe
Q 002376 154 KITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSL--VHLRL 231 (929)
Q Consensus 154 ~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~L 231 (929)
+|+ .+|.. .+++|++|+|++|++++. | .|..|+++++|++|+|++|++++. .+..+++| ++|+|
T Consensus 111 ~l~-~lp~~---~l~~L~~L~Ls~N~l~~l-~------~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L 176 (562)
T 3a79_B 111 RLQ-NISCC---PMASLRHLDLSFNDFDVL-P------VCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILL 176 (562)
T ss_dssp CCC-EECSC---CCTTCSEEECCSSCCSBC-C------CCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEE
T ss_pred cCC-ccCcc---ccccCCEEECCCCCcccc-C------chHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEe
Confidence 998 67765 799999999999988541 1 235677889999999999998863 45555555 99999
Q ss_pred eecCC--CCcCCcccccCCC-CcceeeccCCcCCCCCCC-cccccccccEEeccCccCcCCccCCCCCCCccceeccccc
Q 002376 232 ASNQL--GGEIPYDVRDTLP-NLLDFIYCFNRFTGKIPG-SLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFN 307 (929)
Q Consensus 232 s~N~l--~~~ip~~~~~~l~-~L~~l~l~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 307 (929)
++|++ ++..|..+.. +. ....++++.|.+.+.++. .+.++++|+.+++++|.....
T Consensus 177 ~~n~l~~~~~~~~~l~~-l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~------------------- 236 (562)
T 3a79_B 177 DLVSYHIKGGETESLQI-PNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQ------------------- 236 (562)
T ss_dssp EESSCCCCSSSCCEEEE-CCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHH-------------------
T ss_pred ecccccccccCcccccc-cCcceEEEEecCccchhhhhhhcccccceEEEecccccccccc-------------------
Confidence 99988 7666655443 22 122445556665554432 234555555555555531100
Q ss_pred cccCCCCCCCCccccccCCCCCCCEEEccCCcccccc----CchhhhccccccEEEecCCccccccCCCC-----CCCCc
Q 002376 308 KIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKI----PESIGNFSNELSKLYLGGNHIYGKIPASI-----GRLRS 378 (929)
Q Consensus 308 ~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~-----~~l~~ 378 (929)
.+. ..+..+..+++|+.|+|+++.+++.. +..+. .. +|++|++++|.++|.+|..+ .+++.
T Consensus 237 ~l~--------~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~-~~-~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~ 306 (562)
T 3a79_B 237 RLM--------TFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFW-PR-PVEYLNIYNLTITERIDREEFTYSETALKS 306 (562)
T ss_dssp HHH--------HHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHT-TS-SEEEEEEEEEEECSCCCCCCCCCCSCSCCE
T ss_pred hHH--------HHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhh-cc-cccEEEEeccEeeccccchhhhcccccchh
Confidence 000 01123455666777777666665432 22221 22 79999999999998888887 88888
Q ss_pred ccEEEeeCCCCCcccC-ccccCC---CCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCccccccccccee
Q 002376 379 LTLLDLSYNSISGEIP-IEIGQL---QGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSI 454 (929)
Q Consensus 379 L~~L~Ls~N~l~~~~p-~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 454 (929)
|+.++++.|.+ .+| ..+..+ .+|++|++++|.+.... ....+++|++|++++|++++.+|..|.++++|+.|
T Consensus 307 L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 382 (562)
T 3a79_B 307 LMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTL 382 (562)
T ss_dssp EEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEE
T ss_pred eehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEE
Confidence 88888888887 345 333332 67999999999986432 12678899999999999998889999999999999
Q ss_pred cccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCc-chhcCcCcceeecccccccccCCccccCCCCCCE
Q 002376 455 DLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPN-SLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEV 533 (929)
Q Consensus 455 ~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 533 (929)
+|++|++++. + .+|..+..+++|++|||++|++++.+|. .+..+++|++|+|++|++++.+|..+. ++|++
T Consensus 383 ~L~~N~l~~~-~-----~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~ 454 (562)
T 3a79_B 383 ILQRNGLKNF-F-----KVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKV 454 (562)
T ss_dssp ECCSSCCCBT-T-----HHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSE
T ss_pred ECCCCCcCCc-c-----cchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCE
Confidence 9999999752 1 2256688899999999999999985554 588899999999999999988776654 78999
Q ss_pred EECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCCC-CCCCCCCCcccccCCCCCcC
Q 002376 534 LDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPS-EGIFRNMSNVHLKGNPKLCL 591 (929)
Q Consensus 534 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~~~l~~l~l~~N~~~c~ 591 (929)
|||++|+++ .+|..+..+++|++|+|++|++++.++. ...+++++.+++++||+.|.
T Consensus 455 L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 455 LDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 512 (562)
T ss_dssp EECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCC
T ss_pred EECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCC
Confidence 999999998 6777777999999999999999965544 35578889999999999883
No 22
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.2e-47 Score=461.87 Aligned_cols=514 Identities=22% Similarity=0.278 Sum_probs=416.3
Q ss_pred ChhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC----CCCCc-ceeeCCCC--CcEEEEEcCCCCCccccCCCCCCCCCCC
Q 002376 26 INTDKEALMSFKSQISQESPSSPLSYWNPSSS----PCTWP-GVICNNFG--NRVIGLNLSSFGLEGTISPHIGNLSFLR 98 (929)
Q Consensus 26 ~~~~~~aLl~~k~~~~~~~~~~~l~~w~~~~~----~c~w~-gv~c~~~~--~~v~~l~l~~~~l~g~i~~~l~~L~~L~ 98 (929)
.+.+...-.++++-...- .-..|+...+ .|.|. +..|+.++ ..|++ + .. .+++
T Consensus 25 ~~~~~~d~~aL~~~~~~~----~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C-~--~~-------------~~V~ 84 (636)
T 4eco_A 25 TAEYIKDYLALKEIWDAL----NGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSL-N--SN-------------GRVT 84 (636)
T ss_dssp CCHHHHHHHHHHHHHHHT----TGGGCCCCC------CCCCCSSCGGGTTCCTTEEE-C--TT-------------CCEE
T ss_pred hhhHHHHHHHHHHHHHHc----CCCCcccCCcCCccCCCCCCCCCcccccCCCCeEE-c--CC-------------CCEE
Confidence 345556667777655432 1237985442 24896 44455441 13543 1 10 3578
Q ss_pred EEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCC------CC------CcccccccccccceecccccccCCCCChhhhcc
Q 002376 99 SIQLQNNKLSGNLPREIGNLFRLRVLNISFNNL------QG------ELPVNISKLTELKMLDLMANKITGRVTDDQLRN 166 (929)
Q Consensus 99 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l------~~------~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~ 166 (929)
.|+|++|.++|.+|++|++|++|++|||++|.+ .| .+|... +..|+ +++++|.+.+.++...-..
T Consensus 85 ~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~ 161 (636)
T 4eco_A 85 GLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDL 161 (636)
T ss_dssp EEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHH
T ss_pred EEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHH
Confidence 999999999999999999999999999999976 33 344433 56777 8888888887666552222
Q ss_pred CCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEe--ecccCCCccCCccccCCCCceEEeeecCCCCc-----
Q 002376 167 LRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDL--TINRLAGTVPSTIYNMTSLVHLRLASNQLGGE----- 239 (929)
Q Consensus 167 l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~L--s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~----- 239 (929)
+..+..+++....+.. .....++.+++ ..|++++ +|..|+++++|++|+|++|+++|.
T Consensus 162 ~~~l~~~~l~~~~~~~--------------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~ 226 (636)
T 4eco_A 162 IKDCINSDPQQKSIKK--------------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEA 226 (636)
T ss_dssp HHHHHHHCTTSCCCCC--------------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSS
T ss_pred HHHHhhcCcccccccc--------------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccc
Confidence 3344444544433211 11112222223 3689998 899999999999999999999986
Q ss_pred ------------CCcccc-cCCCCcceeeccCCcCCCCCCCcccccccccEEeccCcc-CcC-CccCCCCCC------Cc
Q 002376 240 ------------IPYDVR-DTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNL-LEG-TLPPGLGNL------PF 298 (929)
Q Consensus 240 ------------ip~~~~-~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~ 298 (929)
+|..+. ..+++|++|++++|++.+.+|..+.++++|++|++++|+ ++| .+|..++++ ++
T Consensus 227 ~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~ 306 (636)
T 4eco_A 227 WENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEK 306 (636)
T ss_dssp CSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGT
T ss_pred ccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCC
Confidence 998887 239999999999999999999999999999999999998 998 899888877 99
Q ss_pred cceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCc
Q 002376 299 LRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRS 378 (929)
Q Consensus 299 L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~ 378 (929)
|++|++++|++..++.. ..+.++++|++|+|++|+++|.+| .+..+. +|++|+|++|+++ .+|..+.++++
T Consensus 307 L~~L~L~~n~l~~ip~~------~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~-~L~~L~L~~N~l~-~lp~~l~~l~~ 377 (636)
T 4eco_A 307 IQIIYIGYNNLKTFPVE------TSLQKMKKLGMLECLYNQLEGKLP-AFGSEI-KLASLNLAYNQIT-EIPANFCGFTE 377 (636)
T ss_dssp CCEEECCSSCCSSCCCH------HHHTTCTTCCEEECCSCCCEEECC-CCEEEE-EESEEECCSSEEE-ECCTTSEEECT
T ss_pred CCEEECCCCcCCccCch------hhhccCCCCCEEeCcCCcCccchh-hhCCCC-CCCEEECCCCccc-cccHhhhhhcc
Confidence 99999999999854310 168899999999999999999999 888877 8999999999999 88999999999
Q ss_pred -ccEEEeeCCCCCcccCccccCCC--CCCEEEecCCcCCCCCccccc-------CCCCCceecccCcccccccCcccccc
Q 002376 379 -LTLLDLSYNSISGEIPIEIGQLQ--GLQVLGLAGNEIPGGIPNSLA-------NLKKLNQIDLSGNELTGEIPISFGNF 448 (929)
Q Consensus 379 -L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~~~l 448 (929)
|++|+|++|+++ .+|..+..+. +|++|++++|++++.+|..+. .+++|++|+|++|+++...+..+..+
T Consensus 378 ~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l 456 (636)
T 4eco_A 378 QVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTG 456 (636)
T ss_dssp TCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTT
T ss_pred cCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccC
Confidence 999999999999 7888887765 899999999999999999998 88899999999999995544556679
Q ss_pred cccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchh--cCcCcceeecccccccccCCcccc
Q 002376 449 QSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLK--NCKSLEELLMAYNQFSGPIPNIVA 526 (929)
Q Consensus 449 ~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~ 526 (929)
++|+.|+|++|+++ .+|...+...+..+.++++|+.|||++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+.
T Consensus 457 ~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~ 533 (636)
T 4eco_A 457 SPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPL 533 (636)
T ss_dssp CCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGG
T ss_pred CCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhh
Confidence 99999999999998 7876665544434455669999999999999 7888887 99999999999999998 899999
Q ss_pred CCCCCCEEEC------CCCcCCCcCCcccccCCCCCeEeCCCCcCcccCCCCCCCCCCCcccccCCCCCcCC
Q 002376 527 ELKGLEVLDL------SSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVHLKGNPKLCLQ 592 (929)
Q Consensus 527 ~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~N~~~c~~ 592 (929)
.+++|++|+| ++|++.+.+|..+.++++|++|+|++|++ +.+|.. .+++++.+++++|+..|..
T Consensus 534 ~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 534 NSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPNISID 603 (636)
T ss_dssp GCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTTCEEE
T ss_pred cCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHh-HhCcCCEEECcCCCCcccc
Confidence 9999999999 56889999999999999999999999999 667765 4489999999999998854
No 23
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4.4e-45 Score=434.59 Aligned_cols=444 Identities=21% Similarity=0.211 Sum_probs=283.5
Q ss_pred CcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecc
Q 002376 71 NRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDL 150 (929)
Q Consensus 71 ~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 150 (929)
.+++.|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|||++|+|+ .+|.. .+++|++|||
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 47899999999999888889999999999999999999999999999999999999999999 67766 8999999999
Q ss_pred cccccCCCCC-hhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcc--cEEEeecccC--CCccCCccccCC-
Q 002376 151 MANKITGRVT-DDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENL--KVLDLTINRL--AGTVPSTIYNMT- 224 (929)
Q Consensus 151 s~N~l~~~i~-~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L--~~L~Ls~N~l--~~~~p~~~~~l~- 224 (929)
++|++++ ++ +..|+++++|++|+|++|++++. .|..+++| +.|+|++|++ ++..|..|.++.
T Consensus 129 s~N~l~~-l~~p~~~~~l~~L~~L~L~~n~l~~~-----------~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~ 196 (562)
T 3a79_B 129 SFNDFDV-LPVCKEFGNLTKLTFLGLSAAKFRQL-----------DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNT 196 (562)
T ss_dssp CSSCCSB-CCCCGGGGGCTTCCEEEEECSBCCTT-----------TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCE
T ss_pred CCCCccc-cCchHhhcccCcccEEecCCCccccC-----------chhhhhhceeeEEEeecccccccccCcccccccCc
Confidence 9999984 44 35599999999999999998541 34445555 9999999999 889999998875
Q ss_pred CCceEEeeecCCCCcCCcccccCCCCcceeeccCCc-----CCCCCCCcccccccccEEeccCccCcCCc----cCCCCC
Q 002376 225 SLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNR-----FTGKIPGSLHNLTNIQIIRMTHNLLEGTL----PPGLGN 295 (929)
Q Consensus 225 ~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~-----l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~ 295 (929)
+.-++++++|.+.+.++...+..+++|+.+++++|+ +.+. ...+..+++|+.|+++++.+++.. ++.+ .
T Consensus 197 ~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~-~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~-~ 274 (562)
T 3a79_B 197 TVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF-LSELTRGPTLLNVTLQHIETTWKCSVKLFQFF-W 274 (562)
T ss_dssp EEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHH-HHHHHSCSSCEEEEEEEEEECHHHHHHHHHHH-T
T ss_pred ceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHH-HHHHhccCcceEEEecCCcCcHHHHHHHHHhh-h
Confidence 233679999999998988888889999999999985 2222 234667788888888877765421 1111 1
Q ss_pred CCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccC-chhhhccccccEEEecCCccccccCCCCC
Q 002376 296 LPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIP-ESIGNFSNELSKLYLGGNHIYGKIPASIG 374 (929)
Q Consensus 296 l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~ 374 (929)
.++|++|++++|.+....+...+. ....+++.|+.++++.|.+ .+| ..+..+.
T Consensus 275 ~~~L~~L~l~~n~l~~~ip~~~~~--~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~---------------------- 328 (562)
T 3a79_B 275 PRPVEYLNIYNLTITERIDREEFT--YSETALKSLMIEHVKNQVF--LFSKEALYSVF---------------------- 328 (562)
T ss_dssp TSSEEEEEEEEEEECSCCCCCCCC--CCSCSCCEEEEEEEEECCC--SSCHHHHHHHH----------------------
T ss_pred cccccEEEEeccEeeccccchhhh--cccccchheehhhccccee--ecChhhhhhhh----------------------
Confidence 224555555555544211110000 0013334444444444444 233 1221110
Q ss_pred CCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCccccc--ccCcccccccccc
Q 002376 375 RLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTG--EIPISFGNFQSLL 452 (929)
Q Consensus 375 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~ 452 (929)
...+|++|++++|.+.... ....+++|++|++++|++++.+|..+.++++|++|+|++|++++ .+|..|.++++|+
T Consensus 329 ~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~ 406 (562)
T 3a79_B 329 AEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLE 406 (562)
T ss_dssp HTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCC
T ss_pred ccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCC
Confidence 0123445555555443211 01344555555555555555455555555555555555555554 2234455555555
Q ss_pred eecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCC
Q 002376 453 SIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLE 532 (929)
Q Consensus 453 ~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 532 (929)
.|++++|++++.+|.+ .+..+++|++|+|++|++++.+|..+. ++|++|+|++|+|+ .+|..+..+++|+
T Consensus 407 ~L~l~~N~l~~~~~~~-------~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~ 476 (562)
T 3a79_B 407 TLDVSLNSLNSHAYDR-------TCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQ 476 (562)
T ss_dssp EEECTTSCCBSCCSSC-------CCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCS
T ss_pred EEECCCCcCCCccChh-------hhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCC
Confidence 5555555555434322 123344555555555555554444332 45666666666666 3444444666666
Q ss_pred EEECCCCcCCCcCCcc-cccCCCCCeEeCCCCcCcccCC
Q 002376 533 VLDLSSNKLSGSIPSD-LQNLQALRSLNLTFNNLEGVVP 570 (929)
Q Consensus 533 ~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p 570 (929)
+|+|++|+|++ +|.. +..+++|+.|++++|++++..|
T Consensus 477 ~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 477 ELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp EEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred EEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 66666666663 3433 6666666666666666665443
No 24
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=5.6e-44 Score=411.31 Aligned_cols=410 Identities=23% Similarity=0.311 Sum_probs=207.2
Q ss_pred CCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhccC
Q 002376 88 SPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNL 167 (929)
Q Consensus 88 ~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l 167 (929)
.|.-...++|++|++++|++ |.+|++|++|++|++|++++|.++|.+|..++++++|+.++++.|..
T Consensus 4 ~p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~------------ 70 (454)
T 1jl5_A 4 NPRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD------------ 70 (454)
T ss_dssp -------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH------------
T ss_pred cccccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc------------
Confidence 34444568889999999998 78898899999999999999999888898888888875555554432
Q ss_pred CCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccC
Q 002376 168 RSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDT 247 (929)
Q Consensus 168 ~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~ 247 (929)
.++++|++++|.+++ +|. -.++|++|++++|++++ +|.. +++|++|++++|++++ +|..
T Consensus 71 ~~l~~L~l~~~~l~~-lp~-----------~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---- 129 (454)
T 1jl5_A 71 RQAHELELNNLGLSS-LPE-----------LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---- 129 (454)
T ss_dssp HTCSEEECTTSCCSC-CCS-----------CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC----
T ss_pred cCCCEEEecCCcccc-CCC-----------CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC----
Confidence 345556666665543 111 01356666666666665 3432 2556666666666652 3221
Q ss_pred CCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCC
Q 002376 248 LPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNS 327 (929)
Q Consensus 248 l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l 327 (929)
.++|++|++++|++++ +| .+.++++|++|++++|++++ +|..+ ++|++|++++|++..++ .+.++
T Consensus 130 ~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l~---------~~~~l 194 (454)
T 1jl5_A 130 PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEELP---------ELQNL 194 (454)
T ss_dssp CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSCC---------CCTTC
T ss_pred CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcCc---------cccCC
Confidence 2456666666666665 44 36666666666666666664 44332 36666666666665431 34566
Q ss_pred CCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEE
Q 002376 328 THLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLG 407 (929)
Q Consensus 328 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 407 (929)
++|++|++++|++++ +|... .+|++|++++|+++ .+| .++.+++|++|++++|++++ +|.. +++|++|+
T Consensus 195 ~~L~~L~l~~N~l~~-l~~~~----~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ 263 (454)
T 1jl5_A 195 PFLTAIYADNNSLKK-LPDLP----LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALN 263 (454)
T ss_dssp TTCCEEECCSSCCSS-CCCCC----TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEE
T ss_pred CCCCEEECCCCcCCc-CCCCc----CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEE
Confidence 666666666666664 44322 25667777777666 445 36667777777777777664 3332 35667777
Q ss_pred ecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEE
Q 002376 408 LAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTID 487 (929)
Q Consensus 408 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~Ld 487 (929)
+++|++++ +|.. .++|++|++++|++++. |.. .++|+.|++++|++++ ++ .+| ++|+.|+
T Consensus 264 l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~-----~~~------~~L~~L~ 323 (454)
T 1jl5_A 264 VRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LC-----DLP------PSLEELN 323 (454)
T ss_dssp CCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-EC-----CCC------TTCCEEE
T ss_pred CCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-cc-----CCc------CcCCEEE
Confidence 77777665 3432 25667777777777652 211 1466677777776653 21 111 3567777
Q ss_pred ecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCC--cCCcccccC-------------
Q 002376 488 LSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSG--SIPSDLQNL------------- 552 (929)
Q Consensus 488 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l------------- 552 (929)
+++|++++ +|.. +++|++|++++|++++ +|. .+++|++|++++|++++ .+|.++..+
T Consensus 324 Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~ 395 (454)
T 1jl5_A 324 VSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELP 395 (454)
T ss_dssp CCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC---------
T ss_pred CCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhccccccccccc
Confidence 77777765 4443 4666777777777763 444 35667777777777776 566666655
Q ss_pred CCCCeEeCCCCcCcc--cCCCCCCCCCCCcccccCCCCCc
Q 002376 553 QALRSLNLTFNNLEG--VVPSEGIFRNMSNVHLKGNPKLC 590 (929)
Q Consensus 553 ~~L~~L~Ls~N~l~~--~~p~~~~~~~l~~l~l~~N~~~c 590 (929)
++|++|++++|++++ .+|. .++.+.+.+|...|
T Consensus 396 ~~L~~L~ls~N~l~~~~~iP~-----sl~~L~~~~~~~~~ 430 (454)
T 1jl5_A 396 QNLKQLHVETNPLREFPDIPE-----SVEDLRMNSERVVD 430 (454)
T ss_dssp ----------------------------------------
T ss_pred CcCCEEECCCCcCCccccchh-----hHhheeCcCcccCC
Confidence 788999999999987 4553 35556666665444
No 25
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=4.1e-43 Score=406.65 Aligned_cols=378 Identities=20% Similarity=0.239 Sum_probs=230.1
Q ss_pred CCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCc-ccccccccccceecccccccCCCCChhhhccCCCCcEE
Q 002376 95 SFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGEL-PVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVL 173 (929)
Q Consensus 95 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L 173 (929)
++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++ +++..|+++++|++|
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L 108 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQ-LETGAFNGLANLEVL 108 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCE-ECTTTTTTCTTCCEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCc-cChhhccCcccCCEE
Confidence 67888888888888777888888888888888888877555 4567777788888888877764 333347777777777
Q ss_pred EccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCc-cccCCCCceEEeeecCCCCcCCcccccCCCCcc
Q 002376 174 NFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPST-IYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLL 252 (929)
Q Consensus 174 ~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~ 252 (929)
+|++|++++.+|. +..|..+++|++|+|++|++++..|.. |.++++|++|+|++|++++
T Consensus 109 ~L~~n~l~~~~~~------~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~-------------- 168 (455)
T 3v47_A 109 TLTQCNLDGAVLS------GNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS-------------- 168 (455)
T ss_dssp ECTTSCCBTHHHH------SSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC--------------
T ss_pred eCCCCCCCccccC------cccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc--------------
Confidence 7777766443221 122555666666666666666555554 5555666666665555553
Q ss_pred eeeccCCcCCCCCCCccccc--ccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCC
Q 002376 253 DFIYCFNRFTGKIPGSLHNL--TNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHL 330 (929)
Q Consensus 253 ~l~l~~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L 330 (929)
..|..+..+ .+|+.|++++|.+.+..+..++. .....+..+++|
T Consensus 169 -----------~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~-----------------------~~~~~~~~~~~L 214 (455)
T 3v47_A 169 -----------ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW-----------------------EKCGNPFKNTSI 214 (455)
T ss_dssp -----------CCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH-----------------------HHHCCTTTTCEE
T ss_pred -----------cChhhhhccccccccccccccCcccccchhhccc-----------------------ccccccccccee
Confidence 344444433 56777777777777544422210 001223455778
Q ss_pred CEEEccCCccccccCchhhhcc--ccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEe
Q 002376 331 NYLALDGNQFEGKIPESIGNFS--NELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGL 408 (929)
Q Consensus 331 ~~L~Ls~N~l~~~~p~~~~~~~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 408 (929)
++|+|++|++++.+|..+.... .+|+.|++++|.+.+.. +..+.+.+..+..+..+
T Consensus 215 ~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~-------- 272 (455)
T 3v47_A 215 TTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS--------------FGHTNFKDPDNFTFKGL-------- 272 (455)
T ss_dssp EEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC--------------TTCCSSCCCCTTTTGGG--------
T ss_pred eeEecCCCcccccchhhhhccccccceeeEeeccccccccc--------------cchhhhccCcccccccc--------
Confidence 8888888888877777766541 25666666666554321 11122222222222221
Q ss_pred cCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEe
Q 002376 409 AGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDL 488 (929)
Q Consensus 409 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdL 488 (929)
..++|++|++++|++++..|..|.++++|+.|+|++|++++.. |..+..+++|++|+|
T Consensus 273 --------------~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~--------~~~~~~l~~L~~L~L 330 (455)
T 3v47_A 273 --------------EASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKID--------DNAFWGLTHLLKLNL 330 (455)
T ss_dssp --------------TTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEEC--------TTTTTTCTTCCEEEC
T ss_pred --------------cccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccC--------hhHhcCcccCCEEEC
Confidence 1134555555555555445555555555555555555554322 334445555566666
Q ss_pred cCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCccc
Q 002376 489 SDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGV 568 (929)
Q Consensus 489 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 568 (929)
++|++++..|..|+++++|++|+|++|++++.+|..|..+++|++|+|++|++++..+..+..+++|++|++++|++++.
T Consensus 331 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 410 (455)
T 3v47_A 331 SQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 410 (455)
T ss_dssp CSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccC
Confidence 66666555566667777777777777777777677777777777777777777766556667777777777777777777
Q ss_pred CCC
Q 002376 569 VPS 571 (929)
Q Consensus 569 ~p~ 571 (929)
+|.
T Consensus 411 ~~~ 413 (455)
T 3v47_A 411 CPR 413 (455)
T ss_dssp TTT
T ss_pred CCc
Confidence 664
No 26
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=5.8e-46 Score=400.65 Aligned_cols=240 Identities=23% Similarity=0.282 Sum_probs=175.1
Q ss_pred hCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
.++|...++||+|+||+||+|++.+ ..++|.+|++++++++|||||+++|+|.+. .+|+
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~------~~~i 108 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD------NLAI 108 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS------SCEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC------eEEE
Confidence 4577788999999999999998752 246799999999999999999999998532 2699
Q ss_pred EEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
|||||++|+|.++++... .++.|||.||+|||+. +||||||||+|||+++++.+||+|||+|+.....
T Consensus 109 VmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 109 VTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp EEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred EEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 999999999999996432 3467999999999998 9999999999999999999999999999876422
Q ss_pred cCCCCCccccceeccccccccccccCC---CCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLG---ERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
.. .......+||+.|||||++.+ ++|+.++||||+|+++||+.++..++...... +.+...+..... .+.
T Consensus 186 ~~----~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~--~~~~~~~~~~~~-~p~ 258 (307)
T 3omv_A 186 SG----SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR--DQIIFMVGRGYA-SPD 258 (307)
T ss_dssp ------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--HHHHHHHHTTCC-CCC
T ss_pred Cc----ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH--HHHHHHHhcCCC-CCC
Confidence 11 122345689999999999864 46899999999998888876665555433221 011111111000 000
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
....+...++.+++++.+||+.||++||||+||++.|+.+...
T Consensus 259 -~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 259 -LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp -STTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred -cccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 0011111222233488899999999999999999999887543
No 27
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.3e-45 Score=403.58 Aligned_cols=235 Identities=22% Similarity=0.315 Sum_probs=171.8
Q ss_pred CCCCCceeecccCceeEEecccc---------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
++|...++||+|+||+||+|++. ...++|.+|+++|++++|||||+++|+|.+.+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~---- 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR---- 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC----
Confidence 35667789999999999999642 12467999999999999999999999996543
Q ss_pred ceEEEEEEecCCCCccccccccc-----------------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeec
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER-----------------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLD 776 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~-----------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~ 776 (929)
..|+|||||++|+|.++++..+ .++.|||+||+|||+. +||||||||+|||++
T Consensus 117 -~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 117 -PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVG 192 (329)
T ss_dssp -SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred -EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEEC
Confidence 3899999999999999986421 3467999999999998 999999999999999
Q ss_pred CCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchh
Q 002376 777 EEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENV 855 (929)
Q Consensus 777 ~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~ 855 (929)
+++.+||+|||+|+.+.... ........+||+.|||||++.+..|+.++||||+|+++||+.+ ...++.....
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~----~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~-- 266 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTD----YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN-- 266 (329)
T ss_dssp TTTEEEECCCC--------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH--
T ss_pred CCCcEEEcccccceeccCCC----cceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH--
Confidence 99999999999999763221 1112234579999999999999999999999999988888654 3444332221
Q ss_pred hhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 856 LQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 856 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
.++++.-..+ . +.+.++..++-+.+++.+||+.||++||||+||+++|+.+.+.
T Consensus 267 ~~~~~~i~~g-----~--~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 267 TEAIDCITQG-----R--ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HHHHHHHHHT-----C--CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHcC-----C--CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 1222111111 0 0111111222233488899999999999999999999998764
No 28
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.7e-46 Score=402.35 Aligned_cols=236 Identities=25% Similarity=0.323 Sum_probs=177.8
Q ss_pred CCCCCceeecccCceeEEecccc---------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
++|...+.||+|+||+||+|++. ...++|.+|+++|++++|||||+++|+|.+.+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~---- 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD---- 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC----
Confidence 46778899999999999999642 12467999999999999999999999996543
Q ss_pred ceEEEEEEecCCCCccccccccc---------------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER---------------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE 778 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~---------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~ 778 (929)
..|+|||||++|+|.++++..+ .++.|||+||+|||+. +||||||||+|||++++
T Consensus 89 -~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 89 -PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 164 (299)
T ss_dssp -SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred -EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCC
Confidence 3899999999999999996421 3467999999999998 99999999999999999
Q ss_pred CceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhh
Q 002376 779 MTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQ 857 (929)
Q Consensus 779 ~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~ 857 (929)
+.+||+|||+|+...... ........+||+.|||||++.++.|+.++||||+|+++||+.+ +..++..... .+
T Consensus 165 ~~~Ki~DFGla~~~~~~~----~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~--~~ 238 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTD----YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--NE 238 (299)
T ss_dssp GCEEECCCSCHHHHTGGG----CEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--HH
T ss_pred CcEEECCcccceecCCCC----ceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HH
Confidence 999999999998763221 1112234579999999999999999999999999988888654 3444433221 12
Q ss_pred ccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 858 VLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 858 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
++..-..+.. .+.++..++-+.+++.+||+.||++||||+||++.|+++.+..
T Consensus 239 ~~~~i~~~~~-------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~ 291 (299)
T 4asz_A 239 VIECITQGRV-------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291 (299)
T ss_dssp HHHHHHHTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHcCCC-------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 2111111110 0111112222334888999999999999999999999987653
No 29
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.3e-42 Score=419.80 Aligned_cols=466 Identities=21% Similarity=0.190 Sum_probs=377.4
Q ss_pred cEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceeccc
Q 002376 72 RVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLM 151 (929)
Q Consensus 72 ~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 151 (929)
+++.|||++|++++..+..|.+|++|++|+|++|+|++..+..|.+|++|++|+|++|+|++..+..|+++++|++|+|+
T Consensus 77 ~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls 156 (635)
T 4g8a_A 77 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVA 156 (635)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccc
Confidence 68899999999998777789999999999999999998888899999999999999999998888889999999999999
Q ss_pred ccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCc----ccEEEeecccCCCccCCccccCCCCc
Q 002376 152 ANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLEN----LKVLDLTINRLAGTVPSTIYNMTSLV 227 (929)
Q Consensus 152 ~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~----L~~L~Ls~N~l~~~~p~~~~~l~~L~ 227 (929)
+|++++...+..++++++|++|+|++|++++..|..+ ..+.+ +..++++.|.++.+.+..+.. ..++
T Consensus 157 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l--------~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~-~~~~ 227 (635)
T 4g8a_A 157 HNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL--------RVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLH 227 (635)
T ss_dssp SSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG--------HHHHTCTTCCCEEECTTCCCCEECTTTTTT-CEEE
T ss_pred cCccccCCCchhhccchhhhhhcccCccccccccccc--------cchhhhhhhhhhhhcccCcccccCcccccc-hhhh
Confidence 9999854344558999999999999999876555443 33333 346788888888666555443 4567
Q ss_pred eEEeeecCCCCcCCcccccCCCCcceeecc------------------------------CCc---CCCCCCCccccccc
Q 002376 228 HLRLASNQLGGEIPYDVRDTLPNLLDFIYC------------------------------FNR---FTGKIPGSLHNLTN 274 (929)
Q Consensus 228 ~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~------------------------------~N~---l~~~~p~~~~~l~~ 274 (929)
.|++++|.....++...+..++.++...+. .+. ....++..+..+.+
T Consensus 228 ~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 307 (635)
T 4g8a_A 228 KLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTN 307 (635)
T ss_dssp EEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTT
T ss_pred hhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcc
Confidence 777877766544433333334444333221 111 11123345566778
Q ss_pred ccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhcccc
Q 002376 275 IQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNE 354 (929)
Q Consensus 275 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 354 (929)
++.+++.+|.+.... .+.....|+.|++..|.+..... ..+..|+.++++.|.+....+ ...++ +
T Consensus 308 l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~----------~~l~~L~~l~l~~n~~~~~~~--~~~l~-~ 372 (635)
T 4g8a_A 308 VSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPT----------LKLKSLKRLTFTSNKGGNAFS--EVDLP-S 372 (635)
T ss_dssp CSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCC----------CBCTTCCEEEEESCCSCCBCC--CCBCT-T
T ss_pred ccccccccccccccc--ccccchhhhhhhcccccccCcCc----------ccchhhhhcccccccCCCCcc--ccccc-c
Confidence 999999999887543 35667789999999998876532 346789999999998874432 23455 7
Q ss_pred ccEEEecCCcccc--ccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCc-ccccCCCCCceec
Q 002376 355 LSKLYLGGNHIYG--KIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIP-NSLANLKKLNQID 431 (929)
Q Consensus 355 L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ 431 (929)
|+.|+++.|.+.. ..+..+..+.+|++|+++.|.+.. .+..+..+++|+.++++.|......+ ..|..+++++.++
T Consensus 373 L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ 451 (635)
T 4g8a_A 373 LEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 451 (635)
T ss_dssp CCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEE
T ss_pred cccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccccccccccccccc
Confidence 9999999999864 455667788999999999999874 56678899999999999988766554 5688999999999
Q ss_pred ccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceee
Q 002376 432 LSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELL 511 (929)
Q Consensus 432 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~ 511 (929)
++.|.+++..|..+..+++|+.|+|++|++.+.++ |..+..+++|++|||++|++++.+|..|.++++|++|+
T Consensus 452 ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~-------~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~ 524 (635)
T 4g8a_A 452 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFL-------PDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 524 (635)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEE-------CSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred ccccccccccccccccchhhhhhhhhhcccccccC-------chhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEE
Confidence 99999999999999999999999999998654332 56778889999999999999999999999999999999
Q ss_pred cccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccC-CCCCeEeCCCCcCcccC
Q 002376 512 MAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNL-QALRSLNLTFNNLEGVV 569 (929)
Q Consensus 512 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~ 569 (929)
|++|+|++.+|..|..+++|++|||++|+|++..|..+..+ ++|++|+|++|+|++..
T Consensus 525 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 525 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp CTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred CCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 99999999999999999999999999999999999999988 68999999999998753
No 30
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=8.8e-46 Score=401.18 Aligned_cols=231 Identities=19% Similarity=0.248 Sum_probs=175.0
Q ss_pred CCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 662 NFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
+++..+.||+|+||+||+|++. ...++|.+|+.++++++|||||+++|+|.+.+
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~---- 102 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ---- 102 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC----
Confidence 4556789999999999998752 12468999999999999999999999996543
Q ss_pred ceEEEEEEecCCCCccccccccc------------------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeee
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER------------------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILL 775 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~------------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl 775 (929)
..++|||||++|+|.++++... .++.|||+||+|||+. +||||||||+|||+
T Consensus 103 -~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl 178 (308)
T 4gt4_A 103 -PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLV 178 (308)
T ss_dssp -SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred -EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEE
Confidence 3799999999999999985321 2467999999999998 89999999999999
Q ss_pred cCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCch
Q 002376 776 DEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPEN 854 (929)
Q Consensus 776 ~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~ 854 (929)
++++.+||+|||+|+.+..... .......+||++|||||++.++.|+.++||||||+++||+.+ ...++.....
T Consensus 179 ~~~~~~Ki~DFGlar~~~~~~~----~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~- 253 (308)
T 4gt4_A 179 YDKLNVKISDLGLFREVYAADY----YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN- 253 (308)
T ss_dssp CGGGCEEECCSCCBCGGGGGGC----BCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH-
T ss_pred CCCCCEEECCcccceeccCCCc----eeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH-
Confidence 9999999999999997643211 112334579999999999999999999999999988888654 2333322221
Q ss_pred hhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 855 VLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 855 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
.+ +...+...... +...++...+. +++.+||+.||++||||+||+++|+.+
T Consensus 254 -~~-----~~~~i~~~~~~-~~p~~~~~~~~-~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 254 -QD-----VVEMIRNRQVL-PCPDDCPAWVY-ALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp -HH-----HHHHHHTTCCC-CCCTTCCHHHH-HHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred -HH-----HHHHHHcCCCC-CCcccchHHHH-HHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 11 11111111100 01112223333 488899999999999999999999864
No 31
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.5e-43 Score=386.64 Aligned_cols=293 Identities=29% Similarity=0.502 Sum_probs=229.1
Q ss_pred cCChhhHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCC--CcceeeCCCC--CcEEEEEcCCCCCcc--ccCCCCCCCCCC
Q 002376 24 VGINTDKEALMSFKSQISQESPSSPLSYWNPSSSPCT--WPGVICNNFG--NRVIGLNLSSFGLEG--TISPHIGNLSFL 97 (929)
Q Consensus 24 ~~~~~~~~aLl~~k~~~~~~~~~~~l~~w~~~~~~c~--w~gv~c~~~~--~~v~~l~l~~~~l~g--~i~~~l~~L~~L 97 (929)
.|.++|++||++||+++.+ |. .+++|+.+.+||. |.||+|+..+ ++|+.|+|++++++| .+|+.|+++++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~~--~~-~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGN--PT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTC--CG-GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCHHHHHHHHHHHHhcCC--cc-cccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 5889999999999999853 44 7899998889998 9999999765 799999999999999 999999999999
Q ss_pred CEEEeec-CCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhccCCCCcEEEcc
Q 002376 98 RSIQLQN-NKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFG 176 (929)
Q Consensus 98 ~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls 176 (929)
++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|.++++|++|+|++|++++.+|.. |.++++|++|+|+
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~ 157 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPS-ISSLPNLVGITFD 157 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGG-GGGCTTCCEEECC
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChH-HhcCCCCCeEECc
Confidence 9999995 9999999999999999999999999999999999999999999999999998777665 8888888888888
Q ss_pred ccccCCCCCccccccCCCccCCCC-cccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceee
Q 002376 177 KNLLWGSIPPSIANLIPSDLSRLE-NLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFI 255 (929)
Q Consensus 177 ~N~l~~~~p~~i~~l~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~ 255 (929)
+|++++.+|.. |..++ +|++|+|++|++++..|..|..++ |++|+|++|+++
T Consensus 158 ~N~l~~~~p~~--------l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~------------------ 210 (313)
T 1ogq_A 158 GNRISGAIPDS--------YGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLE------------------ 210 (313)
T ss_dssp SSCCEEECCGG--------GGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEE------------------
T ss_pred CCcccCcCCHH--------HhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCccc------------------
Confidence 88876655543 34455 777777777777777777777665 777777666665
Q ss_pred ccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEc
Q 002376 256 YCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLAL 335 (929)
Q Consensus 256 l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~L 335 (929)
+.+|..|..+++|+.|+|++|.+++.+|. +..+++|++|+|
T Consensus 211 -------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--------------------------------~~~l~~L~~L~L 251 (313)
T 1ogq_A 211 -------GDASVLFGSDKNTQKIHLAKNSLAFDLGK--------------------------------VGLSKNLNGLDL 251 (313)
T ss_dssp -------ECCGGGCCTTSCCSEEECCSSEECCBGGG--------------------------------CCCCTTCCEEEC
T ss_pred -------CcCCHHHhcCCCCCEEECCCCceeeecCc--------------------------------ccccCCCCEEEC
Confidence 34555566667777777777777655442 233455666666
Q ss_pred cCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCC
Q 002376 336 DGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNS 388 (929)
Q Consensus 336 s~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 388 (929)
++|++++.+|..+..+. +|++|+|++|+++|.+|.. +.+++|+.|++++|.
T Consensus 252 s~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 252 RNNRIYGTLPQGLTQLK-FLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp CSSCCEECCCGGGGGCT-TCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred cCCcccCcCChHHhcCc-CCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 66666666666666655 5666666666666666665 666666666676666
No 32
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.7e-42 Score=398.98 Aligned_cols=407 Identities=23% Similarity=0.263 Sum_probs=273.1
Q ss_pred CcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCC-------------cEEeCCCCCCCCCccc
Q 002376 71 NRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRL-------------RVLNISFNNLQGELPV 137 (929)
Q Consensus 71 ~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------------~~L~Ls~N~l~~~~p~ 137 (929)
.++..++++++++ |.+|+++++|++|++|+|++|.+.|.+|.+++++++| ++|++++|.+++ +|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC
Confidence 3788999999999 8999999999999999999999999999999999875 999999999996 444
Q ss_pred ccccccccceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccC
Q 002376 138 NISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVP 217 (929)
Q Consensus 138 ~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p 217 (929)
. .++|++|++++|++++ +|.. +++|++|++++|++++ +|. ..++|++|+|++|++++ +|
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~----~~~L~~L~l~~n~l~~-l~~-----------~~~~L~~L~L~~n~l~~-lp 147 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPEL----PQSLKSLLVDNNNLKA-LSD-----------LPPLLEYLGVSNNQLEK-LP 147 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCC----CTTCCEEECCSSCCSC-CCS-----------CCTTCCEEECCSSCCSS-CC
T ss_pred C---cCCCCEEEccCCcCCc-cccc----cCCCcEEECCCCccCc-ccC-----------CCCCCCEEECcCCCCCC-Cc
Confidence 2 3789999999999996 7753 4899999999999864 221 01689999999999997 66
Q ss_pred CccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCC
Q 002376 218 STIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLP 297 (929)
Q Consensus 218 ~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 297 (929)
.|.++++|++|++++|++++ +|.. .++|++|++++|++++ +| .+.++++|+.|++++|.+++ +|... +
T Consensus 148 -~~~~l~~L~~L~l~~N~l~~-lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~ 215 (454)
T 1jl5_A 148 -ELQNSSFLKIIDVDNNSLKK-LPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---L 215 (454)
T ss_dssp -CCTTCTTCCEEECCSSCCSC-CCCC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---T
T ss_pred -ccCCCCCCCEEECCCCcCcc-cCCC----cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---C
Confidence 59999999999999999984 6653 4589999999999998 56 68999999999999999996 45433 5
Q ss_pred ccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCC
Q 002376 298 FLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLR 377 (929)
Q Consensus 298 ~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 377 (929)
+|++|++++|.+..++ .+..+++|++|++++|++++ +|... .+|++|++++|++++ +|.. .+
T Consensus 216 ~L~~L~l~~n~l~~lp---------~~~~l~~L~~L~l~~N~l~~-l~~~~----~~L~~L~l~~N~l~~-l~~~---~~ 277 (454)
T 1jl5_A 216 SLESIVAGNNILEELP---------ELQNLPFLTTIYADNNLLKT-LPDLP----PSLEALNVRDNYLTD-LPEL---PQ 277 (454)
T ss_dssp TCCEEECCSSCCSSCC---------CCTTCTTCCEEECCSSCCSS-CCSCC----TTCCEEECCSSCCSC-CCCC---CT
T ss_pred cccEEECcCCcCCccc---------ccCCCCCCCEEECCCCcCCc-ccccc----cccCEEECCCCcccc-cCcc---cC
Confidence 8999999999987543 36788999999999999985 56532 479999999999986 5544 37
Q ss_pred cccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCC-CCCceecccCcccccccCcccccccccceecc
Q 002376 378 SLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANL-KKLNQIDLSGNELTGEIPISFGNFQSLLSIDL 456 (929)
Q Consensus 378 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 456 (929)
+|++|++++|++++. |.. .++|++|++++|++++ ++ .+ ++|++|++++|++++ +|.. +++|++|++
T Consensus 278 ~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L 344 (454)
T 1jl5_A 278 SLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIA 344 (454)
T ss_dssp TCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEEC
T ss_pred cCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEEC
Confidence 899999999999862 321 2689999999999985 22 23 589999999999986 5654 578999999
Q ss_pred cCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCC--CCCcchhcCcCcceeecccccccccCCccccCCCCCCEE
Q 002376 457 SNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSG--NLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVL 534 (929)
Q Consensus 457 s~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 534 (929)
++|+++ .+ |. .+++|++|||++|++++ .+|.++++ |+.|.+.|.+|.. +++|++|
T Consensus 345 ~~N~l~-~l--------p~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L 401 (454)
T 1jl5_A 345 SFNHLA-EV--------PE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQL 401 (454)
T ss_dssp CSSCCS-CC--------CC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC------------------
T ss_pred CCCccc-cc--------cc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEE
Confidence 999987 34 33 35789999999999998 67776654 3457777788764 5789999
Q ss_pred ECCCCcCCC--cCCcccccCCCCCeEeCCCCcCcccCCCC
Q 002376 535 DLSSNKLSG--SIPSDLQNLQALRSLNLTFNNLEGVVPSE 572 (929)
Q Consensus 535 ~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 572 (929)
|+++|++++ .+|.+ ++.|.+.+|.+.+.+|..
T Consensus 402 ~ls~N~l~~~~~iP~s------l~~L~~~~~~~~~~~~~~ 435 (454)
T 1jl5_A 402 HVETNPLREFPDIPES------VEDLRMNSERVVDPYEFA 435 (454)
T ss_dssp ----------------------------------------
T ss_pred ECCCCcCCccccchhh------HhheeCcCcccCCccccC
Confidence 999999997 66644 566778999998877644
No 33
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=9.3e-42 Score=395.31 Aligned_cols=364 Identities=21% Similarity=0.252 Sum_probs=273.3
Q ss_pred CcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEe
Q 002376 200 ENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIR 279 (929)
Q Consensus 200 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~ 279 (929)
++|++|+|++|++++..|..|.++++|++|+|++|.+.+.++...+..+++|++|++++|++++..|..|.++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 35555556666665555556666666666666666665555555444566666666666666666677777777777777
Q ss_pred ccCccCcCCccCC--CCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhcc-cccc
Q 002376 280 MTHNLLEGTLPPG--LGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFS-NELS 356 (929)
Q Consensus 280 Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-~~L~ 356 (929)
|++|.+++..|.. |..+++|++|++++|++...... ..+.++++|++|+|++|++++..|..+..+. .+|+
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~------~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~ 183 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPA------SFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFT 183 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCC------GGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEE
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcc------cccCCCCcccEEeCCCCcccccChhhhhcccccccc
Confidence 7777777644433 77777777777777776654321 1256777888888888888877777766552 2688
Q ss_pred EEEecCCccccccCCCC--------CCCCcccEEEeeCCCCCcccCccccCC---CCCCEEEecCCcCCCCCcccccCCC
Q 002376 357 KLYLGGNHIYGKIPASI--------GRLRSLTLLDLSYNSISGEIPIEIGQL---QGLQVLGLAGNEIPGGIPNSLANLK 425 (929)
Q Consensus 357 ~L~Ls~N~l~~~~p~~~--------~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~ 425 (929)
.|++++|.+.+..+..+ ..+++|++|+|++|++++..|..+..+ ++|+.|++++|.+.+..
T Consensus 184 ~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~-------- 255 (455)
T 3v47_A 184 LLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS-------- 255 (455)
T ss_dssp EEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC--------
T ss_pred ccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccc--------
Confidence 88888888876655443 356788888888888888777776554 77888888888765421
Q ss_pred CCceecccCcccccccCccccc--ccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhc
Q 002376 426 KLNQIDLSGNELTGEIPISFGN--FQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKN 503 (929)
Q Consensus 426 ~L~~L~Ls~N~l~~~~p~~~~~--l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~ 503 (929)
+..+.+.+..+..|.. .++|+.|++++|++++.+ |..+..+++|++|+|++|++++..|..|.+
T Consensus 256 ------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~--------~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 321 (455)
T 3v47_A 256 ------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALL--------KSVFSHFTDLEQLTLAQNEINKIDDNAFWG 321 (455)
T ss_dssp ------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEEC--------TTTTTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred ------cchhhhccCcccccccccccCceEEEecCccccccc--------hhhcccCCCCCEEECCCCcccccChhHhcC
Confidence 1222333333334443 368999999999998654 677888999999999999999999999999
Q ss_pred CcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCCCC-CCCCCCCccc
Q 002376 504 CKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSE-GIFRNMSNVH 582 (929)
Q Consensus 504 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~~~l~~l~ 582 (929)
+++|++|+|++|++++..|..|+.+++|++|||++|++++..|..|.++++|++|+|++|++++.++.. ..+++++.++
T Consensus 322 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 401 (455)
T 3v47_A 322 LTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIW 401 (455)
T ss_dssp CTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred cccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999876654 5678999999
Q ss_pred ccCCCCCcC
Q 002376 583 LKGNPKLCL 591 (929)
Q Consensus 583 l~~N~~~c~ 591 (929)
+++|++.|.
T Consensus 402 l~~N~l~~~ 410 (455)
T 3v47_A 402 LHTNPWDCS 410 (455)
T ss_dssp CCSSCBCCC
T ss_pred ccCCCcccC
Confidence 999999885
No 34
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=7.5e-45 Score=400.80 Aligned_cols=247 Identities=19% Similarity=0.290 Sum_probs=185.5
Q ss_pred CChHHHHHhhCCCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHccCC-ccccce
Q 002376 651 ISYDELRRATGNFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNVRH-RNLVKL 707 (929)
Q Consensus 651 ~~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l~H-pniv~l 707 (929)
++.++++...++|+..+.||+|+||+||+|++. ...++|.+|+++|++++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 344566667789999999999999999998643 124579999999999965 999999
Q ss_pred eeecccCCCCCcceEEEEEEecCCCCccccccccc------------------------cccccHHHHHHHhhhCCCCCE
Q 002376 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER------------------------KNELDITSALDYLHNDCEVPV 763 (929)
Q Consensus 708 ~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~------------------------~~~~~ia~aL~yLH~~~~~~i 763 (929)
+|+|.+.+ ..+++|||||++|+|.++++..+ .++.|||+||+|||+. +|
T Consensus 134 ~g~~~~~~----~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~i 206 (353)
T 4ase_A 134 LGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KC 206 (353)
T ss_dssp EEEECCTT----SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred EEEEEecC----CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---Ce
Confidence 99996533 23799999999999999996422 2356999999999998 99
Q ss_pred EecCCCCCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch
Q 002376 764 VHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI 843 (929)
Q Consensus 764 iHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~ 843 (929)
|||||||+|||+++++.+||+|||+|+.+... .........+||+.|||||++.++.|+.++||||+||++||+.+
T Consensus 207 iHRDLK~~NILl~~~~~vKi~DFGlar~~~~~----~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t 282 (353)
T 4ase_A 207 IHRDLAARNILLSEKNVVKICDFGLARDIYKD----PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282 (353)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCGGGSCTTTC----TTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTT
T ss_pred ecCccCccceeeCCCCCEEECcchhhhhcccC----CCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHh
Confidence 99999999999999999999999999976322 11122345689999999999999999999999999988888653
Q ss_pred -hHHhhhcCCchhhhccChHHHHhhcccchhhhhhhH-HHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 844 -VKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHD-CLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 844 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
+..++.... ..+.+...+.. .. +...++ +..++. +++.+||+.||++||||+||++.|+++.+..
T Consensus 283 ~G~~Pf~~~~--~~~~~~~~i~~----g~--~~~~p~~~~~~~~-~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 283 LGASPYPGVK--IDEEFCRRLKE----GT--RMRAPDYTTPEMY-QTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp TSCCSSTTCC--CSHHHHHHHHH----TC--CCCCCTTCCHHHH-HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCC--HHHHHHHHHHc----CC--CCCCCccCCHHHH-HHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 333332221 11111111211 11 111111 222333 3888999999999999999999999987653
No 35
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.2e-44 Score=393.27 Aligned_cols=251 Identities=22% Similarity=0.252 Sum_probs=175.2
Q ss_pred CCCCceeecccCceeEEeccccC-----------cHHHHH--HHHHHHHccCCccccceeeecccCCCCCcceEEEEEEe
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG-----------SWKSFI--AECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF 728 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~-----------~~~~~~--~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~ 728 (929)
+|...++||+|+||+||+|++.+ ..+.+. +|+..+.+++|||||+++|+|.+.+. ....+|+||||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~-~~~~~~lV~Ey 82 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNG-TWTQLWLVSDY 82 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS-SSEEEEEEEEC
T ss_pred EEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCC-CceEEEEEecC
Confidence 56778999999999999998763 233444 45556678899999999999976442 23458999999
Q ss_pred cCCCCccccccccc-------cccccHHHHHHHhhhC-----CCCCEEecCCCCCCeeecCCCceEEecccccccccccc
Q 002376 729 LSNGSLGDWIHGER-------KNELDITSALDYLHND-----CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796 (929)
Q Consensus 729 ~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~-----~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 796 (929)
|++|+|.++++... .++.|+|+||+|||++ +.++||||||||+|||+|+++.+||+|||+|+......
T Consensus 83 ~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 162 (303)
T 3hmm_A 83 HEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 162 (303)
T ss_dssp CTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTT
T ss_pred CCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCC
Confidence 99999999997432 4478999999999986 25689999999999999999999999999998764321
Q ss_pred CCCCCccccceeccccccccccccCCC------CCCCCCCCCCCcCCCCCcchhHHhhhcCCc---hhhhcc--C---hH
Q 002376 797 DNQSSISSTHVFMGSIGYVPPEYGLGE------RPSTAGDVPTSESFAGEFNIVKWVESNLPE---NVLQVL--D---PE 862 (929)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~---~~~~~~--~---~~ 862 (929)
.. ........+||++|||||++.+. .++.++||||+|+++||+.+...++....+ ...... + ..
T Consensus 163 ~~--~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~ 240 (303)
T 3hmm_A 163 DT--IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE 240 (303)
T ss_dssp TE--ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHH
T ss_pred Cc--eeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHH
Confidence 11 11122346899999999999765 367899999999998887654333222111 111110 0 11
Q ss_pred HHHhhccc-----chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 863 LRQLMTSN-----ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 863 l~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
+....... .+......++...+.+ ++.+||+.||++||||+||+++|+++.++
T Consensus 241 ~~~~~~~~~~rp~~p~~~~~~~~~~~l~~-li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 241 MRKVVCEQKLRPNIPNRWQSCEALRVMAK-IMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHTTSCCCCCCCGGGGSSHHHHHHHH-HHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHhcccCCCCCCccccchHHHHHHHH-HHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 11111100 0111111123333444 89999999999999999999999998753
No 36
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.1e-44 Score=392.08 Aligned_cols=244 Identities=18% Similarity=0.175 Sum_probs=179.1
Q ss_pred hhCCCCCceeecccCceeEEeccccCc-----------HHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEE
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTGS-----------WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYE 727 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~-----------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e 727 (929)
..+.|+..++||+|+||+||+|++... ...+.+|+.++++++|||||++++++.+ ...+|+|||
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~~~E~~il~~l~HpnIV~l~~~~~~-----~~~~~ivmE 130 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVRE-----GPWVNIFME 130 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCTHHHHTTTTCCCTTBCCEEEEEEE-----TTEEEEEEC
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhHHHHHHHHHhCCCCCCCcEEEEEEE-----CCEEEEEEe
Confidence 345678888999999999999987622 1223589999999999999999999854 345899999
Q ss_pred ecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC-ceEEeccccccccccccCC
Q 002376 728 FLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM-TAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 728 ~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~-~~ki~DfGla~~~~~~~~~ 798 (929)
||++|+|.+++++.. .++.||+.||+|||++ +||||||||+|||++.+| .+||+|||+|+.+......
T Consensus 131 y~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 131 LLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred ccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 999999999997433 3467999999999998 999999999999999988 6999999999976432111
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLH 878 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 878 (929)
........++||+.|||||++.+..|+.++||||+||++|++..+..++..... .+++ ..+.. ... .....+
T Consensus 208 -~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~--~~~~-~~i~~---~~~-~~~~~~ 279 (336)
T 4g3f_A 208 -KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR--GPLC-LKIAS---EPP-PIREIP 279 (336)
T ss_dssp -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC--SCCH-HHHHH---SCC-GGGGSC
T ss_pred -cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH--HHHH-HHHHc---CCC-CchhcC
Confidence 111122346899999999999999999999999999888777655544432211 1111 11111 111 001111
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 879 DCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 879 ~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
..++..+++++.+||+.||++|||++|+++.|..+.+...
T Consensus 280 ~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 280 PSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred ccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence 2233344457779999999999999999999988877654
No 37
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-43 Score=379.77 Aligned_cols=227 Identities=24% Similarity=0.357 Sum_probs=167.4
Q ss_pred CCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEE
Q 002376 664 SHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 664 ~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV 725 (929)
+..++||+|+||+||+|.+.. ..+.|.+|++++++++|||||+++++|.+.. .....+|+|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~-~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE-TTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc-CCCcEEEEE
Confidence 566789999999999997651 2457999999999999999999999985432 234568999
Q ss_pred EEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeec-CCCceEEecccccccccccc
Q 002376 726 YEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLD-EEMTAKVGDFGLARFLLERV 796 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~-~~~~~ki~DfGla~~~~~~~ 796 (929)
||||++|+|.+++++.. .++.||+.||+|||++ .++||||||||+|||++ +++.+||+|||+|+....
T Consensus 108 mEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~-- 184 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA-- 184 (290)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT--
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC--
Confidence 99999999999997432 3467999999999997 22499999999999998 479999999999985421
Q ss_pred CCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhh
Q 002376 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQ 876 (929)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 876 (929)
......+||+.|||||++.+ +|+.++||||+||++|++.++..++..... ..+ +......... ...
T Consensus 185 ------~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~-~~~-----~~~~i~~~~~-~~~ 250 (290)
T 3fpq_A 185 ------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-AAQ-----IYRRVTSGVK-PAS 250 (290)
T ss_dssp ------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-HHH-----HHHHHTTTCC-CGG
T ss_pred ------CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-HHH-----HHHHHHcCCC-CCC
Confidence 12345689999999999865 699999999999888887666555533221 011 1111111100 001
Q ss_pred hhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 877 LHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 877 ~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.+.....-+++++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 251 FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11111122334777999999999999999875
No 38
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=6.4e-44 Score=389.38 Aligned_cols=227 Identities=22% Similarity=0.249 Sum_probs=175.1
Q ss_pred CCCCCceeecccCceeEEecccc----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
+.|+..+.||+|+||+||+|++. ...+.+.+|+++|++++|||||++++++.+. ..+|+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~-----~~~~i 148 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-----DELWV 148 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEET-----TEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-----CEEEE
Confidence 46888999999999999999875 2345688999999999999999999999653 35899
Q ss_pred EEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 725 VYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
|||||++|+|.++++..+ .++.||+.||+|||+. +||||||||+|||++.+|.+||+|||+|+.+...
T Consensus 149 vmEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-- 223 (346)
T 4fih_A 149 VMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-- 223 (346)
T ss_dssp EECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSS--
T ss_pred EEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCC--
Confidence 999999999999986432 3467999999999998 9999999999999999999999999999876322
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQL 877 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 877 (929)
.......+||+.|||||++.+..|+.++||||+||++|++..+..++..... .+.+. .+...... ....
T Consensus 224 ----~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~-~i~~~~~~----~~~~ 292 (346)
T 4fih_A 224 ----VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMK-MIRDNLPP----RLKN 292 (346)
T ss_dssp ----SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHH-HHHHSSCC----CCSC
T ss_pred ----CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHH-HHHcCCCC----CCCc
Confidence 1223456899999999999999999999999999888887665555433221 11111 11111111 1111
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 878 HDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 878 ~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
+..++..+++++.+||+.||++|||++|+++
T Consensus 293 ~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 293 LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1222333444777999999999999999875
No 39
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=5.6e-43 Score=391.31 Aligned_cols=227 Identities=22% Similarity=0.250 Sum_probs=175.2
Q ss_pred CCCCCceeecccCceeEEecccc----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
+.|+..+.||+|+||+||+|++. ...+.+.+|+.+|++++|||||+++++|.+. ..+|+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~-----~~~~i 225 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-----DELWV 225 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEET-----TEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEEC-----CEEEE
Confidence 56899999999999999999865 2345688999999999999999999999653 35899
Q ss_pred EEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 725 VYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
|||||++|+|.++++..+ .++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+...
T Consensus 226 VmEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~-- 300 (423)
T 4fie_A 226 VMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-- 300 (423)
T ss_dssp EEECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSS--
T ss_pred EEeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCC--
Confidence 999999999999986432 3467999999999998 9999999999999999999999999999876322
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQL 877 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 877 (929)
.......+||+.|||||++.+..|+.++||||+||++|++..+..++..... .+.+. .+....... ...
T Consensus 301 ----~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~-~i~~~~~~~----~~~ 369 (423)
T 4fie_A 301 ----VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMK-MIRDNLPPR----LKN 369 (423)
T ss_dssp ----CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHH-HHHHSCCCC----CSC
T ss_pred ----CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHH-HHHcCCCCC----Ccc
Confidence 1223456899999999999999999999999999888877665555433221 11111 111111111 111
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 878 HDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 878 ~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
+..++..+++++.+||+.||++|||++|+++
T Consensus 370 ~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 370 LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1112233344777999999999999999875
No 40
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.6e-43 Score=380.36 Aligned_cols=225 Identities=23% Similarity=0.295 Sum_probs=174.1
Q ss_pred CCCCCceeecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||+|+||+||+|++. ...+.+.+|++++++++|||||++++++.+ ...
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-----~~~ 106 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD-----DEK 106 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SSE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----CCE
Confidence 57999999999999999999765 124568899999999999999999999854 345
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
+|+|||||++|+|.+++++.. .++.||+.||+|||++ +||||||||+|||+++++.+||+|||+|+.+.
T Consensus 107 ~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 107 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp EEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence 899999999999999987432 3467999999999998 99999999999999999999999999999764
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
.. ........++||+.|||||++.+..|+.++||||+||++|++..+..++.... ..+++...... ...
T Consensus 184 ~~----~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~~~----~~~- 252 (311)
T 4aw0_A 184 PE----SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--EGLIFAKIIKL----EYD- 252 (311)
T ss_dssp TT----TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHT----CCC-
T ss_pred CC----CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHcC----CCC-
Confidence 22 11122345689999999999999999999999999988777665554443221 11222111111 111
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREAL 907 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~ 907 (929)
.++.++.-+++++.+|++.||++|||++|+.
T Consensus 253 ---~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 253 ---FPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp ---CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred ---CCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 1112223344577799999999999999874
No 41
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=3.3e-40 Score=380.20 Aligned_cols=364 Identities=20% Similarity=0.217 Sum_probs=258.0
Q ss_pred CccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChh
Q 002376 83 LEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDD 162 (929)
Q Consensus 83 l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~ 162 (929)
..+..+.+++++++|++|+|++|.+++. | .|+.+++|++|+|++|+|++. | ++.+++|++|+|++|+|++ ++
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~-- 101 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD-- 101 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--
T ss_pred cCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee--
Confidence 3445556788888999999999988864 5 688888999999999998864 4 8888888888888888885 43
Q ss_pred hhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCc
Q 002376 163 QLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPY 242 (929)
Q Consensus 163 ~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~ 242 (929)
++++++|++|++++|++++ + | ++.+++|++|++++|++++. .+.++++|++|++++|+..+.++
T Consensus 102 -~~~l~~L~~L~L~~N~l~~-l--------~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~~- 165 (457)
T 3bz5_A 102 -VTPLTKLTYLNCDTNKLTK-L--------D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKLD- 165 (457)
T ss_dssp -CTTCTTCCEEECCSSCCSC-C--------C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCCC-
T ss_pred -cCCCCcCCEEECCCCcCCe-e--------c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCcccccc-
Confidence 7788888888888887754 1 1 56777888888888888764 26677777777777775443332
Q ss_pred ccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCcccc
Q 002376 243 DVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFIT 322 (929)
Q Consensus 243 ~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~ 322 (929)
+..+++|+.|++++|++++ +| ++.+++|+.|++++|++...
T Consensus 166 --------------------------~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---------- 206 (457)
T 3bz5_A 166 --------------------------VTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---------- 206 (457)
T ss_dssp --------------------------CTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC----------
T ss_pred --------------------------cccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee----------
Confidence 3344555555555555554 23 55555555555555555432
Q ss_pred ccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCC
Q 002376 323 SLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQG 402 (929)
Q Consensus 323 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 402 (929)
.+..+++|++|+|++|++++ +| +..++ +|+.|++++|++++.. ++.+++|+.|++++|+
T Consensus 207 ~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~-~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n~-------------- 265 (457)
T 3bz5_A 207 DLNQNIQLTFLDCSSNKLTE-ID--VTPLT-QLTYFDCSVNPLTELD---VSTLSKLTTLHCIQTD-------------- 265 (457)
T ss_dssp CCTTCTTCSEEECCSSCCSC-CC--CTTCT-TCSEEECCSSCCSCCC---CTTCTTCCEEECTTCC--------------
T ss_pred ccccCCCCCEEECcCCcccc-cC--ccccC-CCCEEEeeCCcCCCcC---HHHCCCCCEEeccCCC--------------
Confidence 24455667777777777765 45 45554 5777777777776643 3455667777766653
Q ss_pred CCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccC
Q 002376 403 LQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLEN 482 (929)
Q Consensus 403 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~ 482 (929)
|+.|++++|.+.+.+| +..+++|+.|++++|.+.+.+|. ...+|+.|++++| ++
T Consensus 266 L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~---------------------~~ 319 (457)
T 3bz5_A 266 LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN---------------------PK 319 (457)
T ss_dssp CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC---------------------TT
T ss_pred CCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc---------------------cc
Confidence 4456677777666665 45677777888888777766664 3355666666555 36
Q ss_pred ccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCC
Q 002376 483 VVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTF 562 (929)
Q Consensus 483 L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 562 (929)
|++|+|++|++++. + ++++++|+.|++++|+|++ ++.|..|++++|+++|. ..+..|..+++++
T Consensus 320 L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~ 383 (457)
T 3bz5_A 320 LVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTN 383 (457)
T ss_dssp CCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBT
T ss_pred CCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCcccccc
Confidence 88999999999984 3 8889999999999999986 35677788999999876 3556788899999
Q ss_pred CcCcccCCCC
Q 002376 563 NNLEGVVPSE 572 (929)
Q Consensus 563 N~l~~~~p~~ 572 (929)
|+++|.+|..
T Consensus 384 N~l~g~ip~~ 393 (457)
T 3bz5_A 384 NSLTIAVSPD 393 (457)
T ss_dssp TBEEEECCTT
T ss_pred CcEEEEcChh
Confidence 9999999865
No 42
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.1e-42 Score=380.35 Aligned_cols=225 Identities=21% Similarity=0.293 Sum_probs=167.9
Q ss_pred CCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
++|+..+.||+|+||+||+|++.. ..+.|.+|++++++++|||||++++++.+ ...+
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~-----~~~~ 98 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE-----NGSL 98 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE-----CCEE
Confidence 689999999999999999997651 24578999999999999999999999854 3458
Q ss_pred EEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
|+|||||++|+|.++++..+ .++.||+.||+|||+. +||||||||+|||+++++.+||+|||+|+.+
T Consensus 99 yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 175 (350)
T 4b9d_A 99 YIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175 (350)
T ss_dssp EEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCC
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceee
Confidence 99999999999999986322 2367999999999998 9999999999999999999999999999876
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
... .......+||+.|||||++.+..|+.++||||+||++|++..+..++.... ..+++........+ .
T Consensus 176 ~~~------~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--~~~~~~~i~~~~~~---~ 244 (350)
T 4b9d_A 176 NST------VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS--MKNLVLKIISGSFP---P 244 (350)
T ss_dssp CHH------HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHTCCC---C
T ss_pred cCC------cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHHcCCCC---C
Confidence 321 112345689999999999999999999999999988877665554443221 12222221221111 1
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.... ++.-+++++.+||+.||++|||++|+++
T Consensus 245 ~~~~----~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 245 VSLH----YSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp CCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCcc----CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1111 2223344777999999999999999975
No 43
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=4.5e-40 Score=379.12 Aligned_cols=352 Identities=18% Similarity=0.211 Sum_probs=243.8
Q ss_pred cEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceeccc
Q 002376 72 RVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLM 151 (929)
Q Consensus 72 ~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 151 (929)
+++.|+++++.+++. | .++.+++|++|+|++|++++. | ++.+++|++|+|++|+|++. | ++++++|++|+|+
T Consensus 43 ~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCD 114 (457)
T ss_dssp TCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECC
T ss_pred CCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECC
Confidence 688999999999974 4 799999999999999999975 4 99999999999999999975 4 8999999999999
Q ss_pred ccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEe
Q 002376 152 ANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRL 231 (929)
Q Consensus 152 ~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 231 (929)
+|++++ ++ ++++++|++|++++|++++. .++.+++|++|++++|+..+.+ .+..+++|++|++
T Consensus 115 ~N~l~~-l~---~~~l~~L~~L~l~~N~l~~l-----------~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l 177 (457)
T 3bz5_A 115 TNKLTK-LD---VSQNPLLTYLNCARNTLTEI-----------DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDC 177 (457)
T ss_dssp SSCCSC-CC---CTTCTTCCEEECTTSCCSCC-----------CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEEC
T ss_pred CCcCCe-ec---CCCCCcCCEEECCCCcccee-----------ccccCCcCCEEECCCCCccccc--ccccCCcCCEEEC
Confidence 999995 54 89999999999999998662 2678899999999999765555 5889999999999
Q ss_pred eecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccC
Q 002376 232 ASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVS 311 (929)
Q Consensus 232 s~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~ 311 (929)
++|++++ +| ...+++|+.|++++|++++. .+..+++|+.|++++|++++ +| ++.+++|+.|++++|++..
T Consensus 178 s~n~l~~-l~---l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 178 SFNKITE-LD---VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp CSSCCCC-CC---CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC
T ss_pred CCCccce-ec---cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCC
Confidence 9999985 55 33477788888888887765 36777778888888887776 44 6666666666666666654
Q ss_pred CCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCc
Q 002376 312 SGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISG 391 (929)
Q Consensus 312 ~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 391 (929)
.+ +..+++|+.|++++| +|+.|++++|.+.+.+| ++.+++|+.|+|++|.+.+
T Consensus 248 ~~----------~~~l~~L~~L~l~~n---------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~ 300 (457)
T 3bz5_A 248 LD----------VSTLSKLTTLHCIQT---------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLY 300 (457)
T ss_dssp CC----------CTTCTTCCEEECTTC---------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCC
T ss_pred cC----------HHHCCCCCEEeccCC---------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccc
Confidence 32 223445555555443 23444555555544444 3444555555555555444
Q ss_pred ccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCccc
Q 002376 392 EIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILR 471 (929)
Q Consensus 392 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~ 471 (929)
.+|. ...+|+.|++++| ++|+.|++++|+|++ +
T Consensus 301 ~l~~---------------------------~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~-l------ 333 (457)
T 3bz5_A 301 LLDC---------------------------QAAGITELDLSQN-------------PKLVYLYLNNTELTE-L------ 333 (457)
T ss_dssp EEEC---------------------------TTCCCSCCCCTTC-------------TTCCEEECTTCCCSC-C------
T ss_pred eecc---------------------------CCCcceEechhhc-------------ccCCEEECCCCcccc-c------
Confidence 4432 2233444444433 345555555555553 1
Q ss_pred CCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCccc
Q 002376 472 PLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDL 549 (929)
Q Consensus 472 ~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 549 (929)
+ ++.+++|+.||+++|++++ ++.|+.|++++|.++|. ..+..|+.+++++|+++|.+|..+
T Consensus 334 --~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~ 394 (457)
T 3bz5_A 334 --D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDL 394 (457)
T ss_dssp --C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTC
T ss_pred --c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhH
Confidence 1 3445556666666665554 23455566666666654 233455666666666666666543
No 44
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3e-42 Score=365.58 Aligned_cols=223 Identities=26% Similarity=0.329 Sum_probs=158.6
Q ss_pred hCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.++|+..+.||+|+||+||+|++.. ..+.+.+|++++++++|||||++++++.+ ..
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-----~~ 86 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-----KD 86 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-----CC
Confidence 3689999999999999999997651 23578999999999999999999999854 34
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.+|+||||| +|+|.+++.+.. .+..||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+..
T Consensus 87 ~~~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~ 162 (275)
T 3hyh_A 87 EIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM 162 (275)
T ss_dssp EEEEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC---
T ss_pred EEEEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeec
Confidence 589999999 689999886433 3467999999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCC-CCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERP-STAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
... ......+||+.|||||++.+..+ +.++||||+||++|++..+..++.... ..+++.. +.. ...
T Consensus 163 ~~~-------~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~--~~~~~~~-i~~---~~~ 229 (275)
T 3hyh_A 163 TDG-------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--IPVLFKN-ISN---GVY 229 (275)
T ss_dssp -------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHH-HHH---TCC
T ss_pred CCC-------CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC--HHHHHHH-HHc---CCC
Confidence 321 12334689999999999998886 579999999988777665554443211 1111111 111 111
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
. .++.++.-+++++.+|++.||++|||++|+++
T Consensus 230 ~----~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 230 T----LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp C----CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred C----CCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 1 11122233344777999999999999999976
No 45
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=6.6e-42 Score=369.85 Aligned_cols=234 Identities=20% Similarity=0.291 Sum_probs=161.3
Q ss_pred CCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCC-------
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS------- 716 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~------- 716 (929)
++|+..+.||+|+||+||+|++.. ..+.+.+|+++|++++|||||++++++.+.+.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 468889999999999999997651 23578899999999999999999999875432
Q ss_pred CCcceEEEEEEecCCCCccccccccc-----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEec
Q 002376 717 KNMEFLALVYEFLSNGSLGDWIHGER-----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGD 785 (929)
Q Consensus 717 ~~~~~~~lV~e~~~~gsL~~~l~~~~-----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~D 785 (929)
....++|+|||||++|+|.++++... .++.||+.||+|||++ +||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEcc
Confidence 12345799999999999999986432 2457999999999998 999999999999999999999999
Q ss_pred cccccccccccCCCC------CccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhcc
Q 002376 786 FGLARFLLERVDNQS------SISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVL 859 (929)
Q Consensus 786 fGla~~~~~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~ 859 (929)
||+|+.+........ .....+..+||+.|||||++.+..|+.++||||+||++|++.. ++ ...... .
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf---~~~~~~-~ 234 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PF---STQMER-V 234 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CC---SSHHHH-H
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CC---CCccHH-H
Confidence 999997754322111 1112244689999999999999999999999999998888642 11 111100 0
Q ss_pred ChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 860 DPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 860 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..+....... .+....+..+.. .+++.+||+.||++|||+.|+++
T Consensus 235 -~~~~~~~~~~--~p~~~~~~~~~~-~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 235 -RTLTDVRNLK--FPPLFTQKYPCE-YVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp -HHHHHHHTTC--CCHHHHHHCHHH-HHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHHHHHhcCC--CCCCCcccCHHH-HHHHHHHcCCChhHCcCHHHHhc
Confidence 0011110000 011111111222 33778999999999999999986
No 46
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2e-38 Score=368.12 Aligned_cols=119 Identities=26% Similarity=0.340 Sum_probs=52.1
Q ss_pred CCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhccCCCCcEEE
Q 002376 95 SFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLN 174 (929)
Q Consensus 95 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~ 174 (929)
++|+.|++++|.+. .+| .+..+++|++|+|++|.+++..| +.++++|++|+|++|++++ +++ +.++++|++|+
T Consensus 46 ~~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 46 DQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-ITP--LANLTNLTGLT 118 (466)
T ss_dssp HTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CGG--GTTCTTCCEEE
T ss_pred ccccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCcccc-Chh--hcCCCCCCEEE
Confidence 34444444444443 222 24444444444444444443322 4444444444444444442 221 44444444444
Q ss_pred ccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEee
Q 002376 175 FGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLA 232 (929)
Q Consensus 175 Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 232 (929)
|++|.+++. + .+..+++|++|+|++|++++. + .+.++++|++|+++
T Consensus 119 L~~n~l~~~---------~-~~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~ 164 (466)
T 1o6v_A 119 LFNNQITDI---------D-PLKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG 164 (466)
T ss_dssp CCSSCCCCC---------G-GGTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE
T ss_pred CCCCCCCCC---------h-HHcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC
Confidence 444443221 0 134444555555555544432 1 24445555555553
No 47
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=3e-38 Score=366.56 Aligned_cols=345 Identities=30% Similarity=0.414 Sum_probs=185.2
Q ss_pred CCCCCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCcc
Q 002376 117 NLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDL 196 (929)
Q Consensus 117 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~ 196 (929)
.+++|+.|++++|.++. +|. +..+++|++|||++|.+++ +++ +.++++|++|++++|.+.+.. + +
T Consensus 44 ~l~~l~~L~l~~~~i~~-l~~-~~~l~~L~~L~Ls~n~l~~-~~~--~~~l~~L~~L~l~~n~l~~~~--------~--~ 108 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKS-IDG-VEYLNNLTQINFSNNQLTD-ITP--LKNLTKLVDILMNNNQIADIT--------P--L 108 (466)
T ss_dssp HHHTCCEEECCSSCCCC-CTT-GGGCTTCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCCCG--------G--G
T ss_pred HhccccEEecCCCCCcc-Ccc-hhhhcCCCEEECCCCccCC-chh--hhccccCCEEECCCCccccCh--------h--h
Confidence 45678888888888874 553 7788888888888888874 443 788888888888888775421 1 6
Q ss_pred CCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCccccccccc
Q 002376 197 SRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQ 276 (929)
Q Consensus 197 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~ 276 (929)
+.+++|++|+|++|++++..+ +.++++|++|+|++|.+++ ++ .+..+++|+
T Consensus 109 ~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~--------------------------~~~~l~~L~ 159 (466)
T 1o6v_A 109 ANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS--------------------------ALSGLTSLQ 159 (466)
T ss_dssp TTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG--------------------------GGTTCTTCS
T ss_pred cCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch--------------------------hhccCCccc
Confidence 677888888888888876544 7778888888888887763 22 133344444
Q ss_pred EEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhcccccc
Q 002376 277 IIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELS 356 (929)
Q Consensus 277 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~ 356 (929)
.|+++ |.+.+..+ +.++++|+.|++++|.+... ..+..+++|++|++++|++++..| ++.+. +|+
T Consensus 160 ~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~~~---------~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~-~L~ 224 (466)
T 1o6v_A 160 QLSFG-NQVTDLKP--LANLTTLERLDISSNKVSDI---------SVLAKLTNLESLIATNNQISDITP--LGILT-NLD 224 (466)
T ss_dssp EEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCCCC---------GGGGGCTTCSEEECCSSCCCCCGG--GGGCT-TCC
T ss_pred EeecC-CcccCchh--hccCCCCCEEECcCCcCCCC---------hhhccCCCCCEEEecCCccccccc--ccccC-CCC
Confidence 44443 23332211 44444444444444443321 123445555555555555554333 33333 455
Q ss_pred EEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcc
Q 002376 357 KLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNE 436 (929)
Q Consensus 357 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 436 (929)
.|++++|++++. ..+..+++|++|++++|.+++..| +..+++|++|++++|++++..+ +..+++|+.|++++|+
T Consensus 225 ~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~ 298 (466)
T 1o6v_A 225 ELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQ 298 (466)
T ss_dssp EEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSC
T ss_pred EEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCc
Confidence 555555555432 234445555555555555554332 4445555555555555544322 4444555555555555
Q ss_pred cccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeeccccc
Q 002376 437 LTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQ 516 (929)
Q Consensus 437 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 516 (929)
+++..+ +..+++|+.|++++|++++.. | +..+++|+.|++++|++++. ..+.++++|+.|++++|+
T Consensus 299 l~~~~~--~~~l~~L~~L~L~~n~l~~~~--------~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~ 364 (466)
T 1o6v_A 299 LEDISP--ISNLKNLTYLTLYFNNISDIS--------P--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQ 364 (466)
T ss_dssp CSCCGG--GGGCTTCSEEECCSSCCSCCG--------G--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSC
T ss_pred ccCchh--hcCCCCCCEEECcCCcCCCch--------h--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCc
Confidence 543322 344444444444444444321 1 33344444444444444432 234444444444444444
Q ss_pred ccccCCccccCCCCCCEEECCCCcCC
Q 002376 517 FSGPIPNIVAELKGLEVLDLSSNKLS 542 (929)
Q Consensus 517 l~~~~p~~~~~l~~L~~L~Ls~N~l~ 542 (929)
+++.+| +..+++|+.|++++|+++
T Consensus 365 l~~~~~--~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 365 ISDLTP--LANLTRITQLGLNDQAWT 388 (466)
T ss_dssp CCBCGG--GTTCTTCCEEECCCEEEE
T ss_pred cCccch--hhcCCCCCEEeccCCccc
Confidence 444333 344444444444444444
No 48
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=4.3e-42 Score=369.45 Aligned_cols=219 Identities=25% Similarity=0.286 Sum_probs=161.3
Q ss_pred CCCCCceeecccCceeEEecccc---------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
++|+..+.||+|+||+||+|+.. .....+.+|++++++++|||||++++++.+ .
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-----~ 98 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT-----E 98 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE-----T
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-----C
Confidence 47999999999999999988642 113468899999999999999999999854 3
Q ss_pred ceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..+|+|||||++|+|.+++++.. .++.||+.||+|||++ +||||||||+|||+++++.+||+|||+|+.
T Consensus 99 ~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 99 GKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp TEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred CEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 45899999999999999987433 3467999999999998 999999999999999999999999999986
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
.... .......+||+.|||||++.+..|+.++||||+||++|++.++..++.... ..+++...... ..
T Consensus 176 ~~~~------~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--~~~~~~~i~~~----~~ 243 (304)
T 3ubd_A 176 SIDH------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD--RKETMTMILKA----KL 243 (304)
T ss_dssp -----------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHC----CC
T ss_pred ccCC------CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC--HHHHHHHHHcC----CC
Confidence 5321 112334689999999999999999999999999988877766555443222 11111111111 11
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGI 903 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 903 (929)
. .++.++.-+++++.+||+.||++|||+
T Consensus 244 ~----~p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 244 G----MPQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp C----CCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred C----CCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 1 111222334447779999999999985
No 49
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=368.21 Aligned_cols=346 Identities=18% Similarity=0.183 Sum_probs=285.2
Q ss_pred eEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccc
Q 002376 228 HLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFN 307 (929)
Q Consensus 228 ~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 307 (929)
.++.++++++ .+|..+. ++++.|++++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 15 ~v~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP---TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp EEECCSCCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-cCCCCCC---CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 4444555554 4444332 34556666666666666677777777888888888877777777888888888888888
Q ss_pred cccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCC
Q 002376 308 KIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYN 387 (929)
Q Consensus 308 ~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 387 (929)
++..++. ..|.++++|++|+|++|++++..|..+..+. +|++|+|++|.+++..+..|.++++|++|+|++|
T Consensus 91 ~l~~~~~-------~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 162 (477)
T 2id5_A 91 RLKLIPL-------GVFTGLSNLTKLDISENKIVILLDYMFQDLY-NLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC 162 (477)
T ss_dssp CCCSCCT-------TSSTTCTTCCEEECTTSCCCEECTTTTTTCT-TCCEEEECCTTCCEECTTSSTTCTTCCEEEEESC
T ss_pred cCCccCc-------ccccCCCCCCEEECCCCccccCChhHccccc-cCCEEECCCCccceeChhhccCCCCCCEEECCCC
Confidence 7776543 3567788999999999999888888888877 7999999999999999999999999999999999
Q ss_pred CCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCC
Q 002376 388 SISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPK 467 (929)
Q Consensus 388 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~ 467 (929)
++++..+..+..+++|+.|+|++|.+.+..+..|..+++|++|++++|.+.+.+|..+....+|+.|+|++|++++ +|
T Consensus 163 ~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~-~~- 240 (477)
T 2id5_A 163 NLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTA-VP- 240 (477)
T ss_dssp CCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCS-CC-
T ss_pred cCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccc-cC-
Confidence 9998777789999999999999999998888899999999999999999888888777777799999999999974 32
Q ss_pred CcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCc
Q 002376 468 GILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPS 547 (929)
Q Consensus 468 ~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 547 (929)
+..+..+++|+.|||++|.+++..+..|.++++|++|+|++|++++..|..|..+++|+.|+|++|++++..+.
T Consensus 241 ------~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 314 (477)
T 2id5_A 241 ------YLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEES 314 (477)
T ss_dssp ------HHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGG
T ss_pred ------HHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHh
Confidence 35788899999999999999988888999999999999999999999999999999999999999999988778
Q ss_pred ccccCCCCCeEeCCCCcCcccCCCCCCCCCCCcccccCCCCCcCCC
Q 002376 548 DLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVHLKGNPKLCLQL 593 (929)
Q Consensus 548 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~N~~~c~~~ 593 (929)
.|..+++|+.|+|++|++++..+....+.....+.+.++...|..|
T Consensus 315 ~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 315 VFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp GBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred HcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 8899999999999999998765433333444456677777777544
No 50
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.8e-37 Score=357.89 Aligned_cols=315 Identities=19% Similarity=0.201 Sum_probs=256.7
Q ss_pred CCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccccccCCCCC
Q 002376 81 FGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVT 160 (929)
Q Consensus 81 ~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~ 160 (929)
++++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+++ .++
T Consensus 21 ~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~ 96 (477)
T 2id5_A 21 KRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LIP 96 (477)
T ss_dssp CCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-SCC
T ss_pred CCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCC-ccC
Confidence 3444 5676654 68999999999999988999999999999999999999988999999999999999999998 688
Q ss_pred hhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcC
Q 002376 161 DDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEI 240 (929)
Q Consensus 161 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i 240 (929)
...|.++++|++|+|++|++.+ +.|..|..+++|+.|+|++|++++..+..|.++++|++|+|++|+++ .+
T Consensus 97 ~~~~~~l~~L~~L~Ls~n~i~~--------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~ 167 (477)
T 2id5_A 97 LGVFTGLSNLTKLDISENKIVI--------LLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT-SI 167 (477)
T ss_dssp TTSSTTCTTCCEEECTTSCCCE--------ECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCS-SC
T ss_pred cccccCCCCCCEEECCCCcccc--------CChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCc-cc
Confidence 8779999999999999998754 34566788999999999999999999999999999999999999998 45
Q ss_pred CcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCcc
Q 002376 241 PYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSF 320 (929)
Q Consensus 241 p~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~ 320 (929)
|...+..+++|+.|++++|++++..+..|..+++|+.|++++|.+.+.+|..+.
T Consensus 168 ~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~-------------------------- 221 (477)
T 2id5_A 168 PTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCL-------------------------- 221 (477)
T ss_dssp CHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTT--------------------------
T ss_pred ChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccc--------------------------
Confidence 655555577777777777777776666777777777777777666555553322
Q ss_pred ccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCC
Q 002376 321 ITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQL 400 (929)
Q Consensus 321 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 400 (929)
...+|++|+|++|++++..+..+..+. +|+.|+|++|.|++..+..|.++++|++|+|++|++++..|..|..+
T Consensus 222 -----~~~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 295 (477)
T 2id5_A 222 -----YGLNLTSLSITHCNLTAVPYLAVRHLV-YLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGL 295 (477)
T ss_dssp -----TTCCCSEEEEESSCCCSCCHHHHTTCT-TCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTC
T ss_pred -----cCccccEEECcCCcccccCHHHhcCcc-ccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCc
Confidence 234677777777777733224555555 78888888888888878888888888888888888888888888888
Q ss_pred CCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccc
Q 002376 401 QGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGE 440 (929)
Q Consensus 401 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 440 (929)
++|++|+|++|+|++..+..|..+++|+.|+|++|.+...
T Consensus 296 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 296 NYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp TTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECS
T ss_pred ccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCc
Confidence 8888888888888887777888888888899988888753
No 51
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.3e-36 Score=342.43 Aligned_cols=349 Identities=17% Similarity=0.178 Sum_probs=232.9
Q ss_pred CCCCCCCCCCCC-CcceeeCCCCCcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCC
Q 002376 49 LSYWNPSSSPCT-WPGVICNNFGNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNIS 127 (929)
Q Consensus 49 l~~w~~~~~~c~-w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 127 (929)
+++|.++.+||. |.+..|.....++ ............-..++++++|++++|.++...+..|..+++|++|+|+
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~~~i-----~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~ 77 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYDVHI-----DMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLN 77 (390)
T ss_dssp ----CCEECBCC------EEEESCEE-----CSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECT
T ss_pred cCCCCCccceehhhhhhccceeeeee-----ecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECC
Confidence 578988777774 4444443222122 2222222223334457899999999999986555567899999999999
Q ss_pred CCCCCCCcccccccccccceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEe
Q 002376 128 FNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDL 207 (929)
Q Consensus 128 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~L 207 (929)
+|.+++..|..|..+++|++|+|++|+++ .+++..|+++++|++|+|++|++.. +.+..|..+++|++|+|
T Consensus 78 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~--------l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 78 DLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSS--------LPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCC--------CCTTTTTTCTTCCEEEC
T ss_pred CCcccccChhhccCCCCcCEEECCCCCCC-cCCHHHhcCCCCCCEEECCCCccCc--------CCHHHhcCCCCCcEEEC
Confidence 99999888889999999999999999998 4666669999999999999998752 23344688999999999
Q ss_pred ecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcC
Q 002376 208 TINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEG 287 (929)
Q Consensus 208 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 287 (929)
++|++++..|..|.++++|++|+|++|++++ ++ ...+++|+.+++++|.+++. ....+|+.|++++|.++.
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~---~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~ 219 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLTH-VD---LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINV 219 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCSB-CC---GGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCE
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCCc-cc---cccccccceeeccccccccc-----CCCCcceEEECCCCeeee
Confidence 9999999889999999999999999999984 33 22366777777777766542 233456666666666653
Q ss_pred CccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCcccc
Q 002376 288 TLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYG 367 (929)
Q Consensus 288 ~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~ 367 (929)
. |.. ..++|++|+|++|++++. ..+..++ +|++|+|++|.+++
T Consensus 220 ~-~~~---------------------------------~~~~L~~L~l~~n~l~~~--~~l~~l~-~L~~L~Ls~n~l~~ 262 (390)
T 3o6n_A 220 V-RGP---------------------------------VNVELTILKLQHNNLTDT--AWLLNYP-GLVEVDLSYNELEK 262 (390)
T ss_dssp E-ECC---------------------------------CCSSCCEEECCSSCCCCC--GGGGGCT-TCSEEECCSSCCCE
T ss_pred c-ccc---------------------------------ccccccEEECCCCCCccc--HHHcCCC-CccEEECCCCcCCC
Confidence 3 211 124555555555555532 3444444 56666666666666
Q ss_pred ccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCccccc
Q 002376 368 KIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGN 447 (929)
Q Consensus 368 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 447 (929)
..|..|..+++|++|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|++|+|++|+++.. | +..
T Consensus 263 ~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~ 337 (390)
T 3o6n_A 263 IMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LST 337 (390)
T ss_dssp EESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCT
T ss_pred cChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chh
Confidence 666666666666666666666653 3445556666666666666665 3455556666666666666666543 2 455
Q ss_pred ccccceecccCCcCC
Q 002376 448 FQSLLSIDLSNNRIN 462 (929)
Q Consensus 448 l~~L~~L~Ls~N~l~ 462 (929)
+++|+.|++++|+++
T Consensus 338 ~~~L~~L~l~~N~~~ 352 (390)
T 3o6n_A 338 HHTLKNLTLSHNDWD 352 (390)
T ss_dssp TCCCSEEECCSSCEE
T ss_pred hccCCEEEcCCCCcc
Confidence 666666666666665
No 52
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.6e-36 Score=359.84 Aligned_cols=350 Identities=17% Similarity=0.198 Sum_probs=259.8
Q ss_pred CCCCCCCCCCCCCCC----CcceeeCCCCCcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCC
Q 002376 46 SSPLSYWNPSSSPCT----WPGVICNNFGNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRL 121 (929)
Q Consensus 46 ~~~l~~w~~~~~~c~----w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L 121 (929)
...+++|.++.+||. |.++.|+. ++ +...... ..+..-..+++++.|++++|.+....+..|.++++|
T Consensus 6 ~~~l~~~~~~~~C~~~~~~~~c~~~~~---~i---~~~~~~~--~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L 77 (597)
T 3oja_B 6 RYNVKPRQPEYKCIDSNLQYDCVFYDV---HI---DMQTQDV--YFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQV 77 (597)
T ss_dssp -----CCCSEECCCCC--CCSEEECSC---EE---CSSCCCC--EESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCC
T ss_pred cccccCCCCCCcCcccCcCceeEecCc---ee---ccccccc--ccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCC
Confidence 456789998888774 66666542 11 1111111 122223357899999999999987666678899999
Q ss_pred cEEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCc
Q 002376 122 RVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLEN 201 (929)
Q Consensus 122 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~ 201 (929)
++|+|++|.|++..|..|+.+++|++|+|++|.|++ +++..|+++++|++|+|++|.+++ +.+..|+.+++
T Consensus 78 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~--------l~~~~~~~l~~ 148 (597)
T 3oja_B 78 ELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY-LPPHVFQNVPLLTVLVLERNDLSS--------LPRGIFHNTPK 148 (597)
T ss_dssp SEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCC--------CCTTTTTTCTT
T ss_pred cEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCC-CCHHHHcCCCCCCEEEeeCCCCCC--------CCHHHhccCCC
Confidence 999999999998888899999999999999999985 666668999999999999998753 23345688999
Q ss_pred ccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEecc
Q 002376 202 LKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMT 281 (929)
Q Consensus 202 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls 281 (929)
|++|+|++|++++..|..|.++++|++|+|++|.+++ ++ ...+++|+.+++++|.+++. ....+|+.|+++
T Consensus 149 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~---~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls 219 (597)
T 3oja_B 149 LTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH-VD---LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDAS 219 (597)
T ss_dssp CCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB-CC---GGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECC
T ss_pred CCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCC-cC---hhhhhhhhhhhcccCccccc-----cCCchhheeecc
Confidence 9999999999999999999999999999999999884 33 22256666666666665532 233455556666
Q ss_pred CccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEec
Q 002376 282 HNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLG 361 (929)
Q Consensus 282 ~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls 361 (929)
+|.++...+. ..++|+.|+|++|.+++ +..+..++ +|+.|+|+
T Consensus 220 ~n~l~~~~~~----------------------------------~~~~L~~L~L~~n~l~~--~~~l~~l~-~L~~L~Ls 262 (597)
T 3oja_B 220 HNSINVVRGP----------------------------------VNVELTILKLQHNNLTD--TAWLLNYP-GLVEVDLS 262 (597)
T ss_dssp SSCCCEEECS----------------------------------CCSCCCEEECCSSCCCC--CGGGGGCT-TCSEEECC
T ss_pred CCcccccccc----------------------------------cCCCCCEEECCCCCCCC--ChhhccCC-CCCEEECC
Confidence 6555432211 12467777777777775 35666666 68888888
Q ss_pred CCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCccccccc
Q 002376 362 GNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEI 441 (929)
Q Consensus 362 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 441 (929)
+|.+++.+|..|+.+++|++|+|++|.+++ +|..+..+++|++|+|++|.++ .+|..+..+++|++|+|++|.+++.
T Consensus 263 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~- 339 (597)
T 3oja_B 263 YNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL- 339 (597)
T ss_dssp SSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-
T ss_pred CCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-
Confidence 888888888888888888888888888875 5666777888888888888887 5677778888888888888888754
Q ss_pred CcccccccccceecccCCcCCC
Q 002376 442 PISFGNFQSLLSIDLSNNRING 463 (929)
Q Consensus 442 p~~~~~l~~L~~L~Ls~N~l~g 463 (929)
| +..+++|+.|++++|.+++
T Consensus 340 ~--~~~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 340 K--LSTHHTLKNLTLSHNDWDC 359 (597)
T ss_dssp C--CCTTCCCSEEECCSSCEEH
T ss_pred C--hhhcCCCCEEEeeCCCCCC
Confidence 2 5667888888888888875
No 53
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=356.12 Aligned_cols=182 Identities=24% Similarity=0.353 Sum_probs=146.3
Q ss_pred CCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCC-CCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS-KNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-~~~~~ 721 (929)
++|+..+.||+|+||+||+|++.. ..+.+.+|+++|++++|||||++++++..... .....
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 579999999999999999997651 23568899999999999999999999865432 23356
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
+|+|||||+ |+|.+++...+ .++.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+.+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 899999995 78999887443 3467999999999998 99999999999999999999999999998764
Q ss_pred cccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
.... .........+||+.|||||++.+. .++.++||||+||++|++.++..++
T Consensus 210 ~~~~--~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF 263 (398)
T 4b99_A 210 TSPA--EHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 263 (398)
T ss_dssp --------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSS
T ss_pred cCcc--ccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCC
Confidence 2211 111223456899999999998876 4699999999999888876665444
No 54
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.8e-38 Score=352.54 Aligned_cols=183 Identities=22% Similarity=0.240 Sum_probs=145.7
Q ss_pred HhhCCCCCceeecccCceeEEecccc-----------------CcHHHHHHHHHHHHcc-CCccccceeeecccCCCCCc
Q 002376 658 RATGNFSHENLIGSGSFGSVLHNERT-----------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 658 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-----------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~ 719 (929)
+..+.|+..+.||+|+||+||+|+.+ ....++.+|+++++.+ +|||||++++++.+ .
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~-----~ 92 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRK-----N 92 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEE-----T
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEE-----C
Confidence 44678999999999999999998642 2345788999999998 69999999999854 3
Q ss_pred ceEEEEEEecCCCCccccccc-----cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC-CceEEeccccccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHG-----ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE-MTAKVGDFGLARFLL 793 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~-----~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~-~~~ki~DfGla~~~~ 793 (929)
.++|+|||||++|+|.++++. .+.+..|++.||+|||+. +||||||||+|||++.+ +.+||+|||+|+...
T Consensus 93 ~~~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~ 169 (361)
T 4f9c_A 93 DHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH 169 (361)
T ss_dssp TEEEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred CEEEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence 458999999999999998863 345578999999999998 99999999999999876 799999999998653
Q ss_pred cccCCC----------------------CCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCcchhHHhh
Q 002376 794 ERVDNQ----------------------SSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 794 ~~~~~~----------------------~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
...... .........+||++|||||++.+.. |+.++||||+||++|++.++..++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp TCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred CccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence 211100 0001123457999999999998764 899999999999888876665544
No 55
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.9e-36 Score=331.85 Aligned_cols=255 Identities=33% Similarity=0.562 Sum_probs=242.6
Q ss_pred CCCCEEEccCCcccc--ccCchhhhccccccEEEecC-CccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCC
Q 002376 328 THLNYLALDGNQFEG--KIPESIGNFSNELSKLYLGG-NHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQ 404 (929)
Q Consensus 328 ~~L~~L~Ls~N~l~~--~~p~~~~~~~~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 404 (929)
.+++.|+|++|++++ .+|..+..+. +|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|..+++|+
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~-~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 128 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLP-YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCT-TCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred ceEEEEECCCCCccCCcccChhHhCCC-CCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCC
Confidence 578999999999999 8999999987 899999995 999999999999999999999999999999999999999999
Q ss_pred EEEecCCcCCCCCcccccCCCCCceecccCcccccccCccccccc-ccceecccCCcCCCCCCCCcccCCchhhhcccCc
Q 002376 405 VLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQ-SLLSIDLSNNRINGNIPKGILRPLPEEISRLENV 483 (929)
Q Consensus 405 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L 483 (929)
+|+|++|++++.+|..+..+++|++|+|++|++++.+|..|..++ +|+.|++++|++++.+ |..+..++ |
T Consensus 129 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~--------~~~~~~l~-L 199 (313)
T 1ogq_A 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKI--------PPTFANLN-L 199 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEEC--------CGGGGGCC-C
T ss_pred EEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccC--------ChHHhCCc-c
Confidence 999999999999999999999999999999999999999999998 9999999999998766 67778887 9
Q ss_pred cEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCC
Q 002376 484 VTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFN 563 (929)
Q Consensus 484 ~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 563 (929)
+.|+|++|++++.+|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+..+++|++|+|++|
T Consensus 200 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 278 (313)
T 1ogq_A 200 AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFN 278 (313)
T ss_dssp SEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSS
T ss_pred cEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCC
Confidence 9999999999999999999999999999999999988776 889999999999999999999999999999999999999
Q ss_pred cCcccCCCCCCCCCCCcccccCCCCCcCCC
Q 002376 564 NLEGVVPSEGIFRNMSNVHLKGNPKLCLQL 593 (929)
Q Consensus 564 ~l~~~~p~~~~~~~l~~l~l~~N~~~c~~~ 593 (929)
+++|.+|....+++++.+++.+||++|+.|
T Consensus 279 ~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 279 NLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp EEEEECCCSTTGGGSCGGGTCSSSEEESTT
T ss_pred cccccCCCCccccccChHHhcCCCCccCCC
Confidence 999999999889999999999999999876
No 56
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1e-37 Score=363.72 Aligned_cols=224 Identities=22% Similarity=0.263 Sum_probs=166.5
Q ss_pred CCCCCceeecccCceeEEeccccCc-------------------HHHHHHH---HHHHHccCCccccceeeecccCCCCC
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTGS-------------------WKSFIAE---CETLRNVRHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~~-------------------~~~~~~E---~~~l~~l~Hpniv~l~~~~~~~~~~~ 718 (929)
++|+..++||+|+||+||+|+...+ ...+.+| +.+++.++|||||++++++.+
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~----- 263 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT----- 263 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC-----
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE-----
Confidence 5799999999999999999986521 1223334 566777899999999999954
Q ss_pred cceEEEEEEecCCCCcccccccc--------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGE--------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~--------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
...+|+|||||+||+|.+++... +.++.||+.||+|||+. +||||||||+|||++.+|.+||+|||+|+
T Consensus 264 ~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 264 PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceee
Confidence 34599999999999999998743 24478999999999998 99999999999999999999999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMT 868 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~ 868 (929)
.+... .....+||+.|||||++.+ ..|+.++||||+||++|++..+..++..... ...++. .....
T Consensus 341 ~~~~~--------~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~----~~i~~ 408 (689)
T 3v5w_A 341 DFSKK--------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID----RMTLT 408 (689)
T ss_dssp ECSSC--------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHH----HHHHH
T ss_pred ecCCC--------CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH----HhhcC
Confidence 76321 1234689999999999975 5799999999999888877665555532211 111111 11111
Q ss_pred ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCC-----HHHHHH
Q 002376 869 SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIG-----IREALR 908 (929)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~ev~~ 908 (929)
.... .++.++.-+++++.+|++.||++|++ ++||.+
T Consensus 409 ~~~~----~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 409 MAVE----LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp CCCC----CCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CCCC----CCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 1111 11223333445777999999999998 677753
No 57
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=9.8e-36 Score=328.19 Aligned_cols=275 Identities=20% Similarity=0.230 Sum_probs=213.7
Q ss_pred CCcCChhhHHHHHHHHhhcCCCCCCCCCCCC----CCCCCCCCCcceeeCC--------CCCcEEEEEcCCCCCccccCC
Q 002376 22 ASVGINTDKEALMSFKSQISQESPSSPLSYW----NPSSSPCTWPGVICNN--------FGNRVIGLNLSSFGLEGTISP 89 (929)
Q Consensus 22 ~~~~~~~~~~aLl~~k~~~~~~~~~~~l~~w----~~~~~~c~w~gv~c~~--------~~~~v~~l~l~~~~l~g~i~~ 89 (929)
.+.+..+|++||++||+++..+ +.+.+++| +...++|.|.|+.|+. ...+|+.|+|++++++ .+|+
T Consensus 21 ~~~~~~~~~~aLl~~k~~~~~~-~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~ 98 (328)
T 4fcg_A 21 GSTALRPYHDVLSQWQRHYNAD-RNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPD 98 (328)
T ss_dssp --CCCCCHHHHHHHHHHHHHHC-CTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCS
T ss_pred ccccCchHHHHHHHHHHhccCC-chhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcCh
Confidence 3556689999999999998655 66778899 4567899999999953 2347888888888887 7888
Q ss_pred CCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChhh------
Q 002376 90 HIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQ------ 163 (929)
Q Consensus 90 ~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~------ 163 (929)
.++++++|++|+|++|.++ .+|..|+++++|++|+|++|+++ .+|..|+++++|++|+|++|++.+.+|...
T Consensus 99 ~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~ 176 (328)
T 4fcg_A 99 QAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDAS 176 (328)
T ss_dssp CGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-C
T ss_pred hhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccch
Confidence 8888888888888888888 88888888888888888888888 778888888888888888888777777652
Q ss_pred --hccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCC
Q 002376 164 --LRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIP 241 (929)
Q Consensus 164 --~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip 241 (929)
|.++++|++|+|++|+++ .+ |..|+.+++|++|+|++|++++ +|..|.++++|++|+|++|++.+.+|
T Consensus 177 ~~~~~l~~L~~L~L~~n~l~-~l--------p~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p 246 (328)
T 4fcg_A 177 GEHQGLVNLQSLRLEWTGIR-SL--------PASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYP 246 (328)
T ss_dssp CCEEESTTCCEEEEEEECCC-CC--------CGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCC
T ss_pred hhhccCCCCCEEECcCCCcC-cc--------hHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhH
Confidence 234788888888888774 33 3445667788888888888875 45567788888888888888777777
Q ss_pred cccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccC
Q 002376 242 YDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVS 311 (929)
Q Consensus 242 ~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~ 311 (929)
..+.. +++|+.|++++|++.+.+|..+.++++|+.|+|++|++.+.+|..++++++|+.+++..|.+..
T Consensus 247 ~~~~~-l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 247 PIFGG-RAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp CCTTC-CCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC
T ss_pred HHhcC-CCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHH
Confidence 66554 7788888888888888888778888888888888888877888777777777777777665543
No 58
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=6.7e-35 Score=330.43 Aligned_cols=335 Identities=19% Similarity=0.207 Sum_probs=176.7
Q ss_pred CCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEE
Q 002376 199 LENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQII 278 (929)
Q Consensus 199 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L 278 (929)
+.++++|++++|.++...+..|.++++|++|+|++|+++ .++...+..+++|++|++++|++++..|..|.++++|++|
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCccc-ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 566777777777776555555666777777777777766 3333333345666666666666665555556666666666
Q ss_pred eccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEE
Q 002376 279 RMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKL 358 (929)
Q Consensus 279 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L 358 (929)
+|++|.++...+..|.++++|++|++++|++..... ..+.++++|++|++++|++++. + +..++ +|+.|
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~-------~~~~~l~~L~~L~l~~n~l~~~-~--~~~l~-~L~~L 191 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIED-------DTFQATTSLQNLQLSSNRLTHV-D--LSLIP-SLFHA 191 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCT-------TTTSSCTTCCEEECCSSCCSBC-C--GGGCT-TCSEE
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccCh-------hhccCCCCCCEEECCCCcCCcc-c--ccccc-cccee
Confidence 666666654433344555555555555555544322 2344455555555555555432 1 22222 44555
Q ss_pred EecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccc
Q 002376 359 YLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELT 438 (929)
Q Consensus 359 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 438 (929)
++++|.+++. ...++|++|++++|.++.. |.. ..+ +|+.|++++|+++
T Consensus 192 ~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~------------------------~L~~L~l~~n~l~ 239 (390)
T 3o6n_A 192 NVSYNLLSTL-----AIPIAVEELDASHNSINVV-RGP--VNV------------------------ELTILKLQHNNLT 239 (390)
T ss_dssp ECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECC--CCS------------------------SCCEEECCSSCCC
T ss_pred eccccccccc-----CCCCcceEEECCCCeeeec-ccc--ccc------------------------cccEEECCCCCCc
Confidence 5555544432 1122444444444444422 211 123 4444444444444
Q ss_pred cccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeeccccccc
Q 002376 439 GEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFS 518 (929)
Q Consensus 439 ~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 518 (929)
+. ..+.++++|+.|+|++|++++.. |..+..+++|+.|+|++|++++ +|..+..+++|++|+|++|+++
T Consensus 240 ~~--~~l~~l~~L~~L~Ls~n~l~~~~--------~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~ 308 (390)
T 3o6n_A 240 DT--AWLLNYPGLVEVDLSYNELEKIM--------YHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL 308 (390)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCEEE--------SGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC
T ss_pred cc--HHHcCCCCccEEECCCCcCCCcC--------hhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce
Confidence 32 23444444444455444444322 3344444455555555555543 3344455566666666666665
Q ss_pred ccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCCCCCCCCCCCcccccCCCCCcCCC
Q 002376 519 GPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVHLKGNPKLCLQL 593 (929)
Q Consensus 519 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~N~~~c~~~ 593 (929)
.+|..+..+++|++|+|++|++++. | +..+++|+.|++++|++++.... ..+..+....+.+++..|..+
T Consensus 309 -~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 309 -HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp -CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTT
T ss_pred -ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceeccc
Confidence 3444555666666677777666643 2 55566777777777777664211 234555556667777777543
No 59
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3.5e-37 Score=362.93 Aligned_cols=228 Identities=21% Similarity=0.260 Sum_probs=172.2
Q ss_pred hCCCCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
.++|+..+.||+|+||+||+|++.. ..+.+.+|+++|+.++|||||++++++.+ ...+|
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-----~~~~~ 230 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED-----DNEMV 230 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEC-----SSEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEE-----CCEEE
Confidence 3689999999999999999987651 24568899999999999999999999954 34589
Q ss_pred EEEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC--CceEEecccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE--MTAKVGDFGLARFL 792 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~--~~~ki~DfGla~~~ 792 (929)
+|||||++|+|.+++... +.++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+
T Consensus 231 iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~ 307 (573)
T 3uto_A 231 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307 (573)
T ss_dssp EEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred EEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence 999999999999988533 23467999999999998 99999999999999854 89999999999976
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
... ......+||+.|||||++.+..|+.++||||+||++|++..+..++..... .+.+ .........
T Consensus 308 ~~~-------~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~--~~~~----~~i~~~~~~ 374 (573)
T 3uto_A 308 DPK-------QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--DETL----RNVKSCDWN 374 (573)
T ss_dssp CTT-------SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHH----HHHHTTCCC
T ss_pred cCC-------CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHH----HHHHhCCCC
Confidence 321 223456899999999999999999999999999887776554444322211 1111 111111111
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.....+..+++-+++++.+||+.||++|||++|+++
T Consensus 375 ~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 375 MDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp CCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111111122333344777999999999999999976
No 60
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=5.2e-35 Score=349.78 Aligned_cols=335 Identities=19% Similarity=0.216 Sum_probs=189.8
Q ss_pred CCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEE
Q 002376 199 LENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQII 278 (929)
Q Consensus 199 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L 278 (929)
+.+++.|++++|.+..+.+..|.++++|++|+|++|.|++ ++...+..+++|+.|++++|.+++..|..|.++++|++|
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEE-IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCC-CChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 5677777777777776666666777777777777777763 332223335666666666666666555555666666666
Q ss_pred eccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEE
Q 002376 279 RMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKL 358 (929)
Q Consensus 279 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L 358 (929)
+|++|.|++..+..|+++++|++|++++|.+ ++..|..+..+. +|++|
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l-------------------------------~~~~~~~~~~l~-~L~~L 176 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNL-------------------------------ERIEDDTFQATT-SLQNL 176 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCC-------------------------------CBCCTTTTTTCT-TCCEE
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcC-------------------------------CCCChhhhhcCC-cCcEE
Confidence 6666666544444445555555555555554 444444444433 34444
Q ss_pred EecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccc
Q 002376 359 YLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELT 438 (929)
Q Consensus 359 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 438 (929)
+|++|.+++.. ++.+++|+.|++++|.+++ +...++|+.|++++|.++...+. + .++|+.|+|++|.++
T Consensus 177 ~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~ 245 (597)
T 3oja_B 177 QLSSNRLTHVD---LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLT 245 (597)
T ss_dssp ECTTSCCSBCC---GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCC
T ss_pred ECcCCCCCCcC---hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCC
Confidence 44444444321 2334444455555554442 12233455555555554422111 1 134555555555555
Q ss_pred cccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeeccccccc
Q 002376 439 GEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFS 518 (929)
Q Consensus 439 ~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 518 (929)
+ +..+..+++|+.|+|++|.+++.+ |..++.+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++
T Consensus 246 ~--~~~l~~l~~L~~L~Ls~N~l~~~~--------~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~ 314 (597)
T 3oja_B 246 D--TAWLLNYPGLVEVDLSYNELEKIM--------YHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL 314 (597)
T ss_dssp C--CGGGGGCTTCSEEECCSSCCCEEE--------SGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC
T ss_pred C--ChhhccCCCCCEEECCCCccCCCC--------HHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC
Confidence 3 234555555555555555555433 4445555555666666665554 3445555667777777777776
Q ss_pred ccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCCCCCCCCCCCcccccCCCCCcCCC
Q 002376 519 GPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVHLKGNPKLCLQL 593 (929)
Q Consensus 519 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~N~~~c~~~ 593 (929)
.+|..+..+++|++|+|++|++++. | +..+++|+.|++++|++++..+. ..+..+....+.+++..|+.+
T Consensus 315 -~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 315 -HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp -CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred -ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 4555666777777777777777654 2 55667788888888888765322 235556666677888888754
No 61
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.4e-33 Score=314.28 Aligned_cols=307 Identities=25% Similarity=0.373 Sum_probs=203.9
Q ss_pred cCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccc
Q 002376 196 LSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNI 275 (929)
Q Consensus 196 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L 275 (929)
+..+++|+.|++++|.+... + .+..+++|++|+|++|++++ +|. +..+++|++|++++|+++.. ..+.++++|
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~-~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L 112 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITD-ISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNL 112 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTC
T ss_pred chhcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCcccc-chh--hhcCCcCCEEEccCCcccCc--hHHcCCCcC
Confidence 34567777777777777643 3 36677777777777777762 332 23345555555555554432 134444444
Q ss_pred cEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccc
Q 002376 276 QIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNEL 355 (929)
Q Consensus 276 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L 355 (929)
++|++++|.+++.. .+..+++|++|++++|.....++ .+..+. +|
T Consensus 113 ~~L~l~~n~i~~~~---------------------------------~~~~l~~L~~L~l~~n~~~~~~~-~~~~l~-~L 157 (347)
T 4fmz_A 113 RELYLNEDNISDIS---------------------------------PLANLTKMYSLNLGANHNLSDLS-PLSNMT-GL 157 (347)
T ss_dssp SEEECTTSCCCCCG---------------------------------GGTTCTTCCEEECTTCTTCCCCG-GGTTCT-TC
T ss_pred CEEECcCCcccCch---------------------------------hhccCCceeEEECCCCCCccccc-chhhCC-CC
Confidence 44444444444321 24455556666666664443332 244444 56
Q ss_pred cEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCc
Q 002376 356 SKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGN 435 (929)
Q Consensus 356 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 435 (929)
++|++++|.+.+..+ +..+++|++|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|++|++++|
T Consensus 158 ~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n 231 (347)
T 4fmz_A 158 NYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNN 231 (347)
T ss_dssp CEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred cEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCC
Confidence 666666666664433 6667777777777777765433 6677777777777777775544 677777888888888
Q ss_pred ccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccc
Q 002376 436 ELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYN 515 (929)
Q Consensus 436 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N 515 (929)
++++..+ +..+++|+.|++++|++++ + +.+..+++|++|++++|++++. ..+..+++|++|++++|
T Consensus 232 ~l~~~~~--~~~l~~L~~L~l~~n~l~~-~---------~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n 297 (347)
T 4fmz_A 232 KITDLSP--LANLSQLTWLEIGTNQISD-I---------NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNN 297 (347)
T ss_dssp CCCCCGG--GTTCTTCCEEECCSSCCCC-C---------GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSS
T ss_pred ccCCCcc--hhcCCCCCEEECCCCccCC-C---------hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCC
Confidence 7775443 7777888888888887764 1 3466777888888888888764 45788888888888888
Q ss_pred cccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCc
Q 002376 516 QFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLE 566 (929)
Q Consensus 516 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 566 (929)
++++..|..++.+++|++|+|++|++++..| +..+++|++|++++|.++
T Consensus 298 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 298 QLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred cCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 8888888888888889999999998887665 788888899999888875
No 62
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=9.7e-36 Score=327.98 Aligned_cols=254 Identities=26% Similarity=0.412 Sum_probs=185.2
Q ss_pred CCChHHHHHhhCCCCCceeecccCceeEEecccc---------------CcHHHHHHHHHHHHccCCccccceeeecccC
Q 002376 650 KISYDELRRATGNFSHENLIGSGSFGSVLHNERT---------------GSWKSFIAECETLRNVRHRNLVKLITSCSSL 714 (929)
Q Consensus 650 ~~~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~---------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~ 714 (929)
++++.++..++++|+..+.||+|+||.||+|+.. ...+.+.+|++++++++||||+++++++...
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 4555667778999999999999999999998754 2346789999999999999999999998543
Q ss_pred CCCCcceEEEEEEecCCCCccccccccc------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceE
Q 002376 715 DSKNMEFLALVYEFLSNGSLGDWIHGER------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAK 782 (929)
Q Consensus 715 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 782 (929)
...++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||++++++.+|
T Consensus 108 -----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~k 179 (321)
T 2qkw_B 108 -----NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPK 179 (321)
T ss_dssp -----TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEE
T ss_pred -----CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEE
Confidence 34799999999999999986432 2367899999999998 999999999999999999999
Q ss_pred EeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccCh
Q 002376 783 VGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDP 861 (929)
Q Consensus 783 i~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~ 861 (929)
|+|||+++...... .........||+.|+|||++.+..++.++||||+|++++++.....++..... ........
T Consensus 180 l~Dfg~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~ 255 (321)
T 2qkw_B 180 ITDFGISKKGTELD----QTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEW 255 (321)
T ss_dssp ECCCTTCEECSSSS----CCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHH
T ss_pred Eeeccccccccccc----ccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHH
Confidence 99999998643211 11122345699999999999989999999999999888776555444322111 10000000
Q ss_pred HHHHh----hcc--cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHH
Q 002376 862 ELRQL----MTS--NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQE 915 (929)
Q Consensus 862 ~l~~~----~~~--~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~ 915 (929)
..... ... ...............+.+++.+||+.||++|||++|+++.|+.+.+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 256 AVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp THHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 00000 000 0000001111222333348889999999999999999999998865
No 63
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3.6e-33 Score=311.04 Aligned_cols=319 Identities=23% Similarity=0.331 Sum_probs=221.1
Q ss_pred cccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCce
Q 002376 149 DLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVH 228 (929)
Q Consensus 149 ~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 228 (929)
.+..+.+++. ..+..+++|+.|++++|.+.. ++ .+..+++|++|+|++|++++..+ |.++++|++
T Consensus 28 ~~~~~~~~~~---~~~~~l~~L~~L~l~~~~i~~---------~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~ 92 (347)
T 4fmz_A 28 VLQKASVTDV---VTQEELESITKLVVAGEKVAS---------IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTN 92 (347)
T ss_dssp HHTCSCTTSE---ECHHHHTTCSEEECCSSCCCC---------CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred hccccccCCc---ccchhcccccEEEEeCCcccc---------ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCE
Confidence 3444555422 236788999999999998743 12 36789999999999999997655 999999999
Q ss_pred EEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceecccccc
Q 002376 229 LRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNK 308 (929)
Q Consensus 229 L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 308 (929)
|+|++|.+++ +| .+..+++|++|++++|++++..+ +..+++|+.|++++|.....++. +..+++|++|++++|.
T Consensus 93 L~L~~n~i~~-~~--~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~ 166 (347)
T 4fmz_A 93 LYIGTNKITD-IS--ALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESK 166 (347)
T ss_dssp EECCSSCCCC-CG--GGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSC
T ss_pred EEccCCcccC-ch--HHcCCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCC
Confidence 9999999984 54 35569999999999999987654 88999999999999966544442 5555555555555555
Q ss_pred ccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCC
Q 002376 309 IVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNS 388 (929)
Q Consensus 309 i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 388 (929)
+.... .+..+++ |++|++++|.+.+..+ +..+++|++|++++|.
T Consensus 167 ~~~~~---------~~~~l~~-------------------------L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~ 210 (347)
T 4fmz_A 167 VKDVT---------PIANLTD-------------------------LYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQ 210 (347)
T ss_dssp CCCCG---------GGGGCTT-------------------------CSEEECTTSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred cCCch---------hhccCCC-------------------------CCEEEccCCccccccc--ccCCCccceeecccCC
Confidence 43321 1333444 5555555555543322 5556666666666666
Q ss_pred CCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCC
Q 002376 389 ISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKG 468 (929)
Q Consensus 389 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~ 468 (929)
+++..+ +..+++|++|++++|++++..+ +..+++|++|++++|++++. ..+..+++|+.|++++|++++.
T Consensus 211 l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~---- 280 (347)
T 4fmz_A 211 ITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI---- 280 (347)
T ss_dssp CCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC----
T ss_pred CCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC----
Confidence 664433 5666666666666666665433 66667777777777776643 3466677777777777776531
Q ss_pred cccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCC
Q 002376 469 ILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLS 542 (929)
Q Consensus 469 ~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 542 (929)
..+..+++|+.|++++|.+++..|..++.+++|++|++++|++++..| +..+++|+.||+++|.|+
T Consensus 281 ------~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 281 ------SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp ------GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ------hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 235667777777787777777777777888888888888888877666 777888888888888775
No 64
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-35 Score=323.80 Aligned_cols=248 Identities=21% Similarity=0.258 Sum_probs=165.1
Q ss_pred CCCCCceeecccCceeEEeccccC-----------cHHHHHHHHHHHHc--cCCccccceeeecccCCCCCcceEEEEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------SWKSFIAECETLRN--VRHRNLVKLITSCSSLDSKNMEFLALVYE 727 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------~~~~~~~E~~~l~~--l~Hpniv~l~~~~~~~~~~~~~~~~lV~e 727 (929)
++|+..+.||+|+||.||+|++.+ ..+.+.+|.+++.. ++||||+++++++..... .....++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~-~~~~~~lv~e 81 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNG-TWTQLWLVSD 81 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CTTSCEEEEECC-TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECS-SSEEEEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEcCcceEEEEecccchhhHHHHHHHHHHHhccCcceeeeeeecccCCC-ccceeEEEEe
Confidence 578999999999999999998762 35677889998888 799999999999876442 2235899999
Q ss_pred ecCCCCccccccccc-------cccccHHHHHHHhh--------hCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 728 FLSNGSLGDWIHGER-------KNELDITSALDYLH--------NDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 728 ~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH--------~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
|+++|+|.++++... .++.|++.||+||| +. +|+||||||+|||++.++.+||+|||+|+..
T Consensus 82 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~ 158 (303)
T 3gxj_A 82 YHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp CCTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCCC-CCE
T ss_pred ccCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeecCcceec
Confidence 999999999986432 34679999999999 65 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCC------CCCCCCCCCCCcCCCCCcchh----------HHhhhcCCchhh
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGE------RPSTAGDVPTSESFAGEFNIV----------KWVESNLPENVL 856 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DV~s~g~~~~~~~~~----------~~~~~~~~~~~~ 856 (929)
...... .........||+.|+|||++.+. .++.++||||+|++++++... ..++...... .
T Consensus 159 ~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~-~ 235 (303)
T 3gxj_A 159 DSATDT--IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS-D 235 (303)
T ss_dssp ETTTTE--ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC--C
T ss_pred cCCCcc--cccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCC-C
Confidence 432111 11112334799999999999876 344689999999999998766 2222211110 0
Q ss_pred hccChHHHHh----hcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 857 QVLDPELRQL----MTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 857 ~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
...+...... .......+....++...+ .+++.+||+.||++|||++|++++|+++.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVM-AKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHH-HHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred ccHHHHHHHHHHhhcCCCccccccchhhHHHH-HHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 0001101110 001111111111222333 3488899999999999999999999987653
No 65
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.3e-35 Score=323.34 Aligned_cols=245 Identities=20% Similarity=0.316 Sum_probs=178.2
Q ss_pred hCCCCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
.++|...+.||+|+||.||+|++.. ..+.|.+|++++++++||||+++++++.+. ...+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~~~ 83 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKD-----KRLN 83 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-----TEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecC-----CeeE
Confidence 3578889999999999999987641 246788999999999999999999999643 3489
Q ss_pred EEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
+||||+++|+|.++++... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 160 (310)
T 3s95_A 84 FITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160 (310)
T ss_dssp EEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred EEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence 9999999999999987422 2367999999999998 999999999999999999999999999987643
Q ss_pred ccCCCC--------CccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHh
Q 002376 795 RVDNQS--------SISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQL 866 (929)
Q Consensus 795 ~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 866 (929)
...... ........+||+.|+|||++.+..++.++||||+|++++++.....++......... ........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~-~~~~~~~~ 239 (310)
T 3s95_A 161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD-FGLNVRGF 239 (310)
T ss_dssp -------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT-SSBCHHHH
T ss_pred ccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH-Hhhhhhcc
Confidence 211110 001112457999999999999999999999999998777754433322221111000 01111111
Q ss_pred hcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhh
Q 002376 867 MTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLK 919 (929)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 919 (929)
..... ....++.+. +++.+||+.||++|||++|+++.|+++++....
T Consensus 240 ~~~~~--~~~~~~~l~----~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~ 286 (310)
T 3s95_A 240 LDRYC--PPNCPPSFF----PITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG 286 (310)
T ss_dssp HHHTC--CTTCCTTHH----HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred ccccC--CCCCCHHHH----HHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence 11000 111112222 377799999999999999999999999887653
No 66
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=4.4e-36 Score=330.77 Aligned_cols=251 Identities=20% Similarity=0.229 Sum_probs=179.3
Q ss_pred hCCCCCceeecccCceeEEeccccC-------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
.++|+..++||+|+||.||+|++.+ ....+.+|+.++++++|||||++++++..... .....++||
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~-~~~~~~lv~ 101 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTS-VDVDLWLIT 101 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS-SSEEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEECCCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCC-CCceEEEEE
Confidence 4688899999999999999997652 13356678889999999999999999876432 234579999
Q ss_pred EecCCCCccccccccc-------cccccHHHHHHHhhhC-------CCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 727 EFLSNGSLGDWIHGER-------KNELDITSALDYLHND-------CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~-------~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
||+++|+|.++++... .++.|++.||+|||+. +.++|+||||||+|||++.++.+||+|||+|+..
T Consensus 102 e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~ 181 (322)
T 3soc_A 102 AFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF 181 (322)
T ss_dssp ECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEE
T ss_pred ecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccccc
Confidence 9999999999987432 3467999999999985 1348999999999999999999999999999876
Q ss_pred ccccCCCCCccccceeccccccccccccCCC-----CCCCCCCCCCCcCCCCCcchhHHhhhcCCc----hhh----hcc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGE-----RPSTAGDVPTSESFAGEFNIVKWVESNLPE----NVL----QVL 859 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~----~~~----~~~ 859 (929)
..... ........||+.|+|||++.+. .++.++||||+|++++++.....++....+ ... ...
T Consensus 182 ~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 257 (322)
T 3soc_A 182 EAGKS----AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP 257 (322)
T ss_dssp CTTSC----CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred ccccC----ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence 43211 1122335799999999999873 466788999999888887665444432111 000 000
Q ss_pred Ch-HHHHhhccc-c----hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 860 DP-ELRQLMTSN-E----SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 860 ~~-~l~~~~~~~-~----~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
.. .+....... . ........+..++. +++.+||+.||++|||++||+++|+++.+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 258 SLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLC-ETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHH-HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred chhhhhhhhhcccCCCCccccccccchHHHHH-HHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 00 111100000 0 00001112222333 488899999999999999999999998764
No 67
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2e-35 Score=321.56 Aligned_cols=228 Identities=23% Similarity=0.248 Sum_probs=172.4
Q ss_pred hCCCCCceeecccCceeEEecccc----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
.++|+..+.||+|+||.||+|.+. ...+.+.+|+.++++++||||+++++++... ...+
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~~~ 93 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-----DELW 93 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEEC-----CEEE
Confidence 458999999999999999999653 2356788999999999999999999998653 3489
Q ss_pred EEEEecCCCCcccccccc-------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGE-------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~-------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 796 (929)
+||||+++|+|.+++... ..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 94 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (297)
T 3fxz_A 94 VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (297)
T ss_dssp EEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEEECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence 999999999999998643 23467899999999998 99999999999999999999999999998653221
Q ss_pred CCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhh
Q 002376 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQ 876 (929)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 876 (929)
.......||+.|+|||++.+..++.++||||+|++++++.....++..... .+........ ......
T Consensus 171 ------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~~~~~-----~~~~~~ 237 (297)
T 3fxz_A 171 ------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP--LRALYLIATN-----GTPELQ 237 (297)
T ss_dssp ------CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHH-----CSCCCS
T ss_pred ------cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhC-----CCCCCC
Confidence 122345799999999999999999999999999877776554444322211 0000000000 000111
Q ss_pred hhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 877 LHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 877 ~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.++.+...+++++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 238 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 11222333444777999999999999999975
No 68
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.8e-35 Score=322.58 Aligned_cols=248 Identities=21% Similarity=0.262 Sum_probs=173.4
Q ss_pred hCCCCCceeecccCceeEEeccccC-----------cHHHHHHHHHHHHc--cCCccccceeeecccCCCCCcceEEEEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-----------SWKSFIAECETLRN--VRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-----------~~~~~~~E~~~l~~--l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
.++|+..+.||+|+||.||+|++.+ ..+.+.+|.+++.. ++||||+++++++.... ......++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~-~~~~~~~lv~ 85 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR-HSSTQLWLIT 85 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE-TTEEEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeecccc-CCCceeEEeh
Confidence 4678999999999999999997652 34567778777776 79999999999976533 2345689999
Q ss_pred EecCCCCccccccccc-------cccccHHHHHHHhh--------hCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 727 EFLSNGSLGDWIHGER-------KNELDITSALDYLH--------NDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH--------~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
||+++|+|.++++... .++.|++.||+||| +. +|+||||||+|||++.++.+||+|||+|+.
T Consensus 86 e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 162 (301)
T 3q4u_A 86 HYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADLGLAVM 162 (301)
T ss_dssp CCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred hhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeCCCeee
Confidence 9999999999986432 34679999999999 65 999999999999999999999999999986
Q ss_pred cccccCCCCCccccceeccccccccccccCCC------CCCCCCCCCCCcCCCCCcchhHHhhh-----cCCch--hh-h
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGE------RPSTAGDVPTSESFAGEFNIVKWVES-----NLPEN--VL-Q 857 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DV~s~g~~~~~~~~~~~~~~-----~~~~~--~~-~ 857 (929)
....... .........||+.|+|||++.+. .++.++||||+|++++++.....+.+ ..|.. .. +
T Consensus 163 ~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 163 HSQSTNQ--LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EETTTTE--EECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccccc--ccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 5432111 01112334799999999999877 45579999999988777654411111 11110 00 0
Q ss_pred ccChHHHHhhcccc---h-hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 858 VLDPELRQLMTSNE---S-QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 858 ~~~~~l~~~~~~~~---~-~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
.............. . ......+.....+.+++.+||+.||++||||+||+++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 00011111110000 0 00001112233344488899999999999999999999976
No 69
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=6.7e-35 Score=322.02 Aligned_cols=245 Identities=31% Similarity=0.470 Sum_probs=187.7
Q ss_pred CCCCChHHHHHhhCCCCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeec
Q 002376 648 HPKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSC 711 (929)
Q Consensus 648 ~~~~~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~ 711 (929)
...++++++..++++|+..+.||+|+||.||+|+... ....|.+|++++++++||||++++++|
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 3468899999999999999999999999999987641 123689999999999999999999999
Q ss_pred ccCCCCCcceEEEEEEecCCCCccccccccc------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC
Q 002376 712 SSLDSKNMEFLALVYEFLSNGSLGDWIHGER------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM 779 (929)
Q Consensus 712 ~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~ 779 (929)
...+ ..++||||+++|+|.++++... .++.|++.||+|||+.+.++|+||||||+||++++++
T Consensus 97 ~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~ 171 (326)
T 3uim_A 97 MTPT-----ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF 171 (326)
T ss_dssp CCSS-----CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTC
T ss_pred ecCC-----ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCC
Confidence 6543 3699999999999999987432 2367899999999998777899999999999999999
Q ss_pred ceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcC--------
Q 002376 780 TAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNL-------- 851 (929)
Q Consensus 780 ~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~-------- 851 (929)
.+||+|||+++..... .........||+.|+|||++.+..++.++||||+|++++++.....++...
T Consensus 172 ~~kl~Dfg~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 246 (326)
T 3uim_A 172 EAVVGDFGLAKLMDYK-----DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 246 (326)
T ss_dssp CEEECCCSSCEECCSS-----SSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCS
T ss_pred CEEeccCccccccCcc-----cccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccch
Confidence 9999999999865321 112233456999999999998889999999999998777755443332100
Q ss_pred ----------Cc-hhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 852 ----------PE-NVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 852 ----------~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
.. ......+..... ....+....+.+ ++.+||+.||++|||++||++.|++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~-li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 247 MLLDWVKGLLKEKKLEALVDVDLQG---------NYKDEEVEQLIQ-VALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp BHHHHHTTTTSSCCSTTSSCTTCTT---------SCCHHHHHHHHH-HHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred hHHHHHHHHhhchhhhhhcChhhcc---------ccCHHHHHHHHH-HHHHHhCcCCccCCCHHHHHHHhcC
Confidence 00 001111111100 001122334444 8889999999999999999999986
No 70
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=7.2e-35 Score=318.81 Aligned_cols=244 Identities=26% Similarity=0.369 Sum_probs=170.8
Q ss_pred HHHHHhhCCCCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCC
Q 002376 654 DELRRATGNFSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSK 717 (929)
Q Consensus 654 ~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 717 (929)
+++....++|+..+.||+|+||.||+|+..+ ..++|.+|++++++++||||+++++++...+
T Consensus 30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-- 107 (309)
T 3p86_A 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP-- 107 (309)
T ss_dssp --CBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT--
T ss_pred ccccCChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--
Confidence 3334445688999999999999999987552 2357889999999999999999999995433
Q ss_pred CcceEEEEEEecCCCCccccccccc-----------cccccHHHHHHHhhhCCCCC--EEecCCCCCCeeecCCCceEEe
Q 002376 718 NMEFLALVYEFLSNGSLGDWIHGER-----------KNELDITSALDYLHNDCEVP--VVHSDLKPGNILLDEEMTAKVG 784 (929)
Q Consensus 718 ~~~~~~lV~e~~~~gsL~~~l~~~~-----------~~~~~ia~aL~yLH~~~~~~--iiHrDlk~~NILl~~~~~~ki~ 784 (929)
..++||||+++|+|.++++... .++.|++.||+|||+. + |+||||||+||+++.++.+||+
T Consensus 108 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~ 181 (309)
T 3p86_A 108 ---NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVC 181 (309)
T ss_dssp ---CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEEC
T ss_pred ---ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEEC
Confidence 3799999999999999987432 2367899999999998 7 9999999999999999999999
Q ss_pred ccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHH
Q 002376 785 DFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELR 864 (929)
Q Consensus 785 DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 864 (929)
|||+++..... ........||+.|+|||++.+..++.++||||+|++++++.....++..... .+... .+.
T Consensus 182 Dfg~a~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~--~~~~~-~~~ 252 (309)
T 3p86_A 182 DFGLSRLKAST------FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP--AQVVA-AVG 252 (309)
T ss_dssp CCC-----------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH--HHHHH-HHH
T ss_pred CCCCCcccccc------ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHH-HHH
Confidence 99999854321 1122345799999999999999999999999999877776555444433221 11000 000
Q ss_pred HhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhh
Q 002376 865 QLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLK 919 (929)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 919 (929)
. ........ ..+...+.+++.+||+.||++|||++|+++.|+++.+...+
T Consensus 253 ~-~~~~~~~~----~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p 302 (309)
T 3p86_A 253 F-KCKRLEIP----RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302 (309)
T ss_dssp H-SCCCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred h-cCCCCCCC----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence 0 00000111 11122233477799999999999999999999998766443
No 71
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=6.6e-35 Score=319.13 Aligned_cols=250 Identities=28% Similarity=0.367 Sum_probs=185.4
Q ss_pred CCCCChHHHHHhhCCCCCc------eeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCcc
Q 002376 648 HPKISYDELRRATGNFSHE------NLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRN 703 (929)
Q Consensus 648 ~~~~~~~~l~~~~~~~~~~------~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpn 703 (929)
...|+++++.+++++|+.. +.||+|+||.||+|+..+ ..+.|.+|++++++++|||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 4568999999999999988 899999999999987541 2467899999999999999
Q ss_pred ccceeeecccCCCCCcceEEEEEEecCCCCccccccccc-----------cccccHHHHHHHhhhCCCCCEEecCCCCCC
Q 002376 704 LVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER-----------KNELDITSALDYLHNDCEVPVVHSDLKPGN 772 (929)
Q Consensus 704 iv~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~N 772 (929)
|+++++++...+ ..++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|
T Consensus 92 i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~N 163 (307)
T 2nru_A 92 LVELLGFSSDGD-----DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSAN 163 (307)
T ss_dssp BCCEEEEECSSS-----SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGG
T ss_pred eEEEEEEEecCC-----ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHH
Confidence 999999986533 3799999999999999886321 2367899999999998 99999999999
Q ss_pred eeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCC
Q 002376 773 ILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLP 852 (929)
Q Consensus 773 ILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~ 852 (929)
|++++++.+||+|||+++...... .........||+.|+|||++.+ .++.++||||+|++++++.....++....
T Consensus 164 ili~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 238 (307)
T 2nru_A 164 ILLDEAFTAKISDFGLARASEKFA----QTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHR 238 (307)
T ss_dssp EEECTTCCEEECCCTTCEECCSCS----SCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTB
T ss_pred EEEcCCCcEEEeeccccccccccc----ccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCc
Confidence 999999999999999998653211 1112234579999999998865 58999999999987777655443332221
Q ss_pred chhhhccCh----------HHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHH
Q 002376 853 ENVLQVLDP----------ELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQE 915 (929)
Q Consensus 853 ~~~~~~~~~----------~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~ 915 (929)
. .+.... .+........ . .......+.+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 239 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 239 E--PQLLLDIKEEIEDEEKTIEDYIDKKM--N-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp S--SSBTTHHHHHHHTTSCCHHHHSCSSC--S-CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred c--hHHHHHHHHHhhhhhhhhhhhccccc--c-ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 1 011111 0111111000 0 0011122333348889999999999999999999998754
No 72
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.3e-34 Score=323.04 Aligned_cols=238 Identities=19% Similarity=0.302 Sum_probs=176.9
Q ss_pred hCCCCCceeecccCceeEEecccc------------------------CcHHHHHHHHHHHHcc-CCccccceeeecccC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT------------------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSL 714 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~------------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~ 714 (929)
.++|+..+.||+|+||.||+|++. ...+++.+|+++++++ +|||||+++++|...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 467888999999999999988631 1235788999999999 899999999999653
Q ss_pred CCCCcceEEEEEEecCCCCccccccccc------------------------cccccHHHHHHHhhhCCCCCEEecCCCC
Q 002376 715 DSKNMEFLALVYEFLSNGSLGDWIHGER------------------------KNELDITSALDYLHNDCEVPVVHSDLKP 770 (929)
Q Consensus 715 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~------------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~ 770 (929)
+ ..|+||||+++|+|.++++..+ .++.||+.||+|||+. +|+||||||
T Consensus 160 ~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp 231 (370)
T 2psq_A 160 G-----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 231 (370)
T ss_dssp S-----SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred C-----CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccch
Confidence 3 3799999999999999987432 1356899999999998 999999999
Q ss_pred CCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhh
Q 002376 771 GNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVES 849 (929)
Q Consensus 771 ~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~ 849 (929)
+|||++.++.+||+|||+++....... ........||+.|||||++.+..++.++||||+|+++|++.+ ...++.
T Consensus 232 ~NIll~~~~~~kl~DFG~a~~~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~ 307 (370)
T 2psq_A 232 RNVLVTENNVMKIADFGLARDINNIDY----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 307 (370)
T ss_dssp GGEEECTTCCEEECCCSSCEETTCCCT----TCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred hhEEECCCCCEEEccccCCcccCcccc----eecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 999999999999999999986532211 111233467889999999999999999999999988777544 333332
Q ss_pred cCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 850 NLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 850 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
..+. .++.. .+..... ....... ...+ .+++.+||+.||++||+++|+++.|+++.....
T Consensus 308 ~~~~--~~~~~-~~~~~~~--~~~~~~~---~~~l-~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~ 367 (370)
T 2psq_A 308 GIPV--EELFK-LLKEGHR--MDKPANC---TNEL-YMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367 (370)
T ss_dssp TCCG--GGHHH-HHHTTCC--CCCCTTS---CHHH-HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred CCCH--HHHHH-HHhcCCC--CCCCCCC---CHHH-HHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 2221 11110 1111000 0011111 1223 337779999999999999999999999887654
No 73
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=8e-35 Score=320.36 Aligned_cols=240 Identities=22% Similarity=0.229 Sum_probs=178.5
Q ss_pred CCCCChHHHHHhhCC----------CCCceeecccCceeEEecccc----------------CcHHHHHHHHHHHHccCC
Q 002376 648 HPKISYDELRRATGN----------FSHENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNVRH 701 (929)
Q Consensus 648 ~~~~~~~~l~~~~~~----------~~~~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l~H 701 (929)
.+.+++++++.+++. |+..+.||+|+||.||+|+.. ...+.+.+|+.++++++|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC
T ss_pred CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC
Confidence 356889999988865 677789999999999998754 234678899999999999
Q ss_pred ccccceeeecccCCCCCcceEEEEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCee
Q 002376 702 RNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNIL 774 (929)
Q Consensus 702 pniv~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NIL 774 (929)
|||+++++++... ...++||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+||+
T Consensus 102 ~niv~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl 173 (321)
T 2c30_A 102 FNVVEMYKSYLVG-----EELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSIL 173 (321)
T ss_dssp TTBCCEEEEEEET-----TEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred CCcceEEEEEEEC-----CEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence 9999999998653 34899999999999999886432 3467899999999998 9999999999999
Q ss_pred ecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCch
Q 002376 775 LDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPEN 854 (929)
Q Consensus 775 l~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~ 854 (929)
++.++.+||+|||+++...... .......||+.|+|||++.+..++.++||||+|++++++.....++.....
T Consensus 174 l~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~- 246 (321)
T 2c30_A 174 LTLDGRVKLSDFGFCAQISKDV------PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP- 246 (321)
T ss_dssp ECTTCCEEECCCTTCEECCSSS------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-
T ss_pred ECCCCcEEEeeeeeeeecccCc------cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-
Confidence 9999999999999998653221 112345799999999999999999999999999877776544433322111
Q ss_pred hhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 855 VLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 855 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.+.. ..+........ .....+...+++++.+||+.||++|||++|+++
T Consensus 247 -~~~~-~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 247 -VQAM-KRLRDSPPPKL----KNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp -HHHH-HHHHHSSCCCC----TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -HHHH-HHHhcCCCCCc----CccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111 01111110000 011112223334777999999999999999986
No 74
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.9e-32 Score=303.14 Aligned_cols=288 Identities=18% Similarity=0.257 Sum_probs=184.6
Q ss_pred CCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceecc
Q 002376 225 SLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNI 304 (929)
Q Consensus 225 ~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 304 (929)
+++.+++++|.++ .+|..+. ++++.|++++|++++..|..|.++++|++|++++|.+++..|..|+++++|++|++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS---PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC---TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred cCCEEECCCCCcc-ccCCCCC---CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 4555556555554 4554432 34555555555555555566666777777777777777665655555555555555
Q ss_pred ccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEe
Q 002376 305 GFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDL 384 (929)
Q Consensus 305 ~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 384 (929)
++|++. .+|..++ .+|++|++++|++++..+..|.++++|++|++
T Consensus 110 ~~n~l~--------------------------------~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l 154 (332)
T 2ft3_A 110 SKNHLV--------------------------------EIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEM 154 (332)
T ss_dssp CSSCCC--------------------------------SCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEEC
T ss_pred CCCcCC--------------------------------ccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEEC
Confidence 444443 3333332 24666666666666555555666666666666
Q ss_pred eCCCCC--cccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCC
Q 002376 385 SYNSIS--GEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRIN 462 (929)
Q Consensus 385 s~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 462 (929)
++|.++ +..|..+..+ +|++|++++|++++ +|..+. ++|++|++++|++++..+..|.++++|+.|+|++|+++
T Consensus 155 ~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~ 230 (332)
T 2ft3_A 155 GGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIR 230 (332)
T ss_dssp CSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCC
T ss_pred CCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCC
Confidence 666664 2455556666 66777777777664 344333 56777777777777766677777777777777777776
Q ss_pred CCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCC------CCCCEEEC
Q 002376 463 GNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAEL------KGLEVLDL 536 (929)
Q Consensus 463 g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~L 536 (929)
+.. |..+..+++|+.|+|++|+++ .+|..+..+++|++|++++|+|++..+..|... ..|+.|++
T Consensus 231 ~~~--------~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l 301 (332)
T 2ft3_A 231 MIE--------NGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISL 301 (332)
T ss_dssp CCC--------TTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEEC
T ss_pred cCC--------hhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEe
Confidence 532 445667777777777777777 667777778888888888888877766666543 56888888
Q ss_pred CCCcCC--CcCCcccccCCCCCeEeCCCCc
Q 002376 537 SSNKLS--GSIPSDLQNLQALRSLNLTFNN 564 (929)
Q Consensus 537 s~N~l~--~~~p~~~~~l~~L~~L~Ls~N~ 564 (929)
++|.+. +..|..|..+++|+.+++++|+
T Consensus 302 ~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 302 FNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ecCcccccccCcccccccchhhhhhccccc
Confidence 888877 5667778888888888888774
No 75
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=7.6e-35 Score=318.40 Aligned_cols=241 Identities=24% Similarity=0.295 Sum_probs=172.9
Q ss_pred hCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
.++|...+.||+|+||.||+|++.+ ..+.|.+|++++++++||||+++++++... ..++
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~l 108 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD------NLAI 108 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS------SCEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECCEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC------cEEE
Confidence 4578899999999999999987652 246788999999999999999999987432 2699
Q ss_pred EEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+|+.....
T Consensus 109 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 109 VTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp EEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred EEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 999999999999886322 3467899999999998 9999999999999999999999999999865321
Q ss_pred cCCCCCccccceeccccccccccccC---CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGL---GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
. .........||+.|+|||++. +..++.++||||+|++++++.....++...... .++ ......... ...
T Consensus 186 ~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~-~~~-~~~~~~~~~-~~~ 258 (307)
T 3lb7_A 186 S----GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-DQI-IFMVGRGYA-SPD 258 (307)
T ss_dssp ------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-HHH-HHHHHHTCC-CCC
T ss_pred c----ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcH-HHH-HHHHhcCCC-Ccc
Confidence 1 111223457999999999986 667899999999998877765554444332221 000 001111000 000
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
.. ......++.+.+++.+||+.||++||++.|+++.|+.+...+
T Consensus 259 ~~-~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 259 LS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp ST-TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred hh-hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 00 000011122333777999999999999999999999887554
No 76
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.9e-35 Score=321.53 Aligned_cols=247 Identities=24% Similarity=0.325 Sum_probs=173.0
Q ss_pred hCCCCCceeecccCceeEEecccc--------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT--------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~--------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
.++|+..+.||+|+||.||+|++. ...+.|.+|++++++++||||+++++++...+ .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG---R 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH---H
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---C
Confidence 357888999999999999998731 12357889999999999999999999986422 2
Q ss_pred ceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
...++||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred CceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 34799999999999999986433 2367899999999998 99999999999999999999999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhcc---------Ch
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVL---------DP 861 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 861 (929)
....... .........||..|+|||++.+..++.++||||+|++++++.....++...+....+.. ..
T Consensus 163 ~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T 3ugc_A 163 VLPQDKE---FFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 239 (295)
T ss_dssp ----------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHH
T ss_pred cccCCcc---eeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHH
Confidence 7643211 11112234578889999999999999999999999887776553322221111110000 00
Q ss_pred HHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 862 ELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 862 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
.+........ +...+...+.-+.+++.+||+.||++|||++|++++|+++++.+
T Consensus 240 ~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 240 HLIELLKNNG--RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHHHHHTTC--CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHhccC--cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 1111111000 00001111222333777999999999999999999999998754
No 77
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=4.9e-35 Score=327.70 Aligned_cols=249 Identities=18% Similarity=0.260 Sum_probs=183.0
Q ss_pred CCChHHHHHhhCCCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHcc-CCccccc
Q 002376 650 KISYDELRRATGNFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNV-RHRNLVK 706 (929)
Q Consensus 650 ~~~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l-~Hpniv~ 706 (929)
.+...++....++|+..+.||+|+||.||+|++. ...+.+.+|+++++++ +|||||+
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 3556677777889999999999999999999621 1235689999999999 7999999
Q ss_pred eeeecccCCCCCcceEEEEEEecCCCCcccccccccc-------------------------------------------
Q 002376 707 LITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK------------------------------------------- 743 (929)
Q Consensus 707 l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~------------------------------------------- 743 (929)
++++|.+.+ ...++||||+++|+|.++++..+.
T Consensus 91 ~~~~~~~~~----~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (359)
T 3vhe_A 91 LLGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSG 166 (359)
T ss_dssp EEEEECSTT----SCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------
T ss_pred eeeeeecCC----CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccc
Confidence 999986533 237999999999999999864321
Q ss_pred -------------------------------ccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 744 -------------------------------NELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 744 -------------------------------~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 243 (359)
T 3vhe_A 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI 243 (359)
T ss_dssp -----------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCT
T ss_pred cccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeee
Confidence 246899999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
... ..........||+.|+|||++.+..++.++||||+|++++++.. ...++..... .+.+...+..... .
T Consensus 244 ~~~----~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~~~~~~~--~ 315 (359)
T 3vhe_A 244 YKD----PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI--DEEFCRRLKEGTR--M 315 (359)
T ss_dssp TSC----TTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC--SHHHHHHHHHTCC--C
T ss_pred ccc----ccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccch--hHHHHHHHHcCCC--C
Confidence 321 11122334578999999999999999999999999987777543 3333222111 1111111111100 0
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
....... .++. +++.+||+.||++||||+|+++.|+++.+..
T Consensus 316 ~~~~~~~---~~l~-~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 316 RAPDYTT---PEMY-QTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp CCCTTCC---HHHH-HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCC---HHHH-HHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 0001111 2233 3777999999999999999999999988754
No 78
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=7.7e-35 Score=327.04 Aligned_cols=238 Identities=22% Similarity=0.300 Sum_probs=165.4
Q ss_pred CCCCCceeecccCceeEEecccc--------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT--------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~--------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
++|+..+.||+|+||.||+|+.. ...++|.+|++++++++||||+++++++...+
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 119 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK----- 119 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS-----
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC-----
Confidence 47889999999999999998753 12357899999999999999999999996533
Q ss_pred eEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..++||||+++|+|.++++... .++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 120 PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred ceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 3799999999999999987432 2367899999999998 999999999999999999999999999987
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
...... .........+|+.|+|||++.+..++.++||||+|++++++.. ...++..... .++. ..+.....
T Consensus 197 ~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~--~~~~-~~i~~~~~-- 268 (373)
T 2qol_A 197 LEDDPE---AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN--QDVI-KAVDEGYR-- 268 (373)
T ss_dssp --------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH--HHHH-HHHHTTEE--
T ss_pred cccCCc---cceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHHH-HHHHcCCC--
Confidence 643211 1111222346789999999999999999999999987777543 3333322211 1111 01111000
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
..... .+...+. +++.+||+.||++||+|+||+++|+++.+...
T Consensus 269 ~~~~~---~~~~~l~-~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~ 312 (373)
T 2qol_A 269 LPPPM---DCPAALY-QLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312 (373)
T ss_dssp CCCCT---TCBHHHH-HHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGG
T ss_pred CCCCc---cccHHHH-HHHHHHhCcChhhCcCHHHHHHHHHHHHhCcc
Confidence 00011 1112233 37779999999999999999999999987643
No 79
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=6.6e-32 Score=298.51 Aligned_cols=289 Identities=19% Similarity=0.242 Sum_probs=157.1
Q ss_pred CCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceecc
Q 002376 225 SLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNI 304 (929)
Q Consensus 225 ~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 304 (929)
+++.++++++.++ .+|..+. ++++.|++++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP---PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC---TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCeEEEecCCCcc-ccCccCC---CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 4555666655555 4554332 35556666666666666666777777777777777777766766766666666666
Q ss_pred ccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCcccc--ccCCCCCCCCcccEE
Q 002376 305 GFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYG--KIPASIGRLRSLTLL 382 (929)
Q Consensus 305 ~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L 382 (929)
++|++..++.. + .++|++|++++|++++..+..+..+. +|+.|++++|.+.. ..+..|.++++|++|
T Consensus 108 s~n~l~~l~~~--------~--~~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L 176 (330)
T 1xku_A 108 SKNQLKELPEK--------M--PKTLQELRVHENEITKVRKSVFNGLN-QMIVVELGTNPLKSSGIENGAFQGMKKLSYI 176 (330)
T ss_dssp CSSCCSBCCSS--------C--CTTCCEEECCSSCCCBBCHHHHTTCT-TCCEEECCSSCCCGGGBCTTGGGGCTTCCEE
T ss_pred CCCcCCccChh--------h--cccccEEECCCCcccccCHhHhcCCc-cccEEECCCCcCCccCcChhhccCCCCcCEE
Confidence 66666543321 1 14556666666666544444444444 45555555555532 444455555555555
Q ss_pred EeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCC
Q 002376 383 DLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRIN 462 (929)
Q Consensus 383 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 462 (929)
++++|.++. +|..+. ++|++|++++|++++..|..|..+++|++|+|++|++++..+..|..+
T Consensus 177 ~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l-------------- 239 (330)
T 1xku_A 177 RIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT-------------- 239 (330)
T ss_dssp ECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGS--------------
T ss_pred ECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCC--------------
Confidence 555555542 333222 444555555555444444444444444555554444444444444444
Q ss_pred CCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccC------CCCCCEEEC
Q 002376 463 GNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAE------LKGLEVLDL 536 (929)
Q Consensus 463 g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~L 536 (929)
++|++|+|++|+++ .+|..+..+++|++|++++|+|++..+..|.. ...|+.|++
T Consensus 240 ------------------~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l 300 (330)
T 1xku_A 240 ------------------PHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSL 300 (330)
T ss_dssp ------------------TTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEEC
T ss_pred ------------------CCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEe
Confidence 44555555555554 44445555555555555555555544444432 256667777
Q ss_pred CCCcCCC--cCCcccccCCCCCeEeCCCCc
Q 002376 537 SSNKLSG--SIPSDLQNLQALRSLNLTFNN 564 (929)
Q Consensus 537 s~N~l~~--~~p~~~~~l~~L~~L~Ls~N~ 564 (929)
++|.+.. ..|..|..+..++.++|++|+
T Consensus 301 ~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 301 FSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred ecCcccccccCccccccccceeEEEecccC
Confidence 7776653 445666777777777777764
No 80
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3.6e-32 Score=300.87 Aligned_cols=252 Identities=25% Similarity=0.281 Sum_probs=142.9
Q ss_pred CccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccc
Q 002376 194 SDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLT 273 (929)
Q Consensus 194 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~ 273 (929)
..|.++++|++|+|++|++++..|..|.++++|++|+|++|+++ .+|..++ ++|++|++++|++++..+..|.+++
T Consensus 72 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~ 147 (332)
T 2ft3_A 72 DDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLR 147 (332)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCS
T ss_pred hHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc---ccCCEEECCCCccCccCHhHhCCCc
Confidence 34455555666666666666555666666666666666666665 4554433 4555555555555555455566666
Q ss_pred cccEEeccCccCc--CCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhc
Q 002376 274 NIQIIRMTHNLLE--GTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNF 351 (929)
Q Consensus 274 ~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 351 (929)
+|+.|++++|.++ +..|..|..+ +|+.|++++|++.. +|..+.
T Consensus 148 ~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~--------------------------------l~~~~~-- 192 (332)
T 2ft3_A 148 NMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG--------------------------------IPKDLP-- 192 (332)
T ss_dssp SCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS--------------------------------CCSSSC--
T ss_pred cCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc--------------------------------cCcccc--
Confidence 6667777666664 2444444444 44444444444433 333322
Q ss_pred cccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceec
Q 002376 352 SNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQID 431 (929)
Q Consensus 352 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 431 (929)
.+|++|++++|++++..+..|..+++|++|+|++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|++|+
T Consensus 193 -~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~ 270 (332)
T 2ft3_A 193 -ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVY 270 (332)
T ss_dssp -SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEE
T ss_pred -CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEE
Confidence 24566666666666555566666666666666666666555556666666666666666665 4555566666666666
Q ss_pred ccCcccccccCccccc------ccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCC
Q 002376 432 LSGNELTGEIPISFGN------FQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNS 492 (929)
Q Consensus 432 Ls~N~l~~~~p~~~~~------l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~ 492 (929)
+++|++++..+..|.. ..+|+.|++++|.+... ...|..+..+++|+.++|++|+
T Consensus 271 l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~------~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 271 LHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYW------EVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGG------GSCGGGGTTBCCSTTEEC----
T ss_pred CCCCCCCccChhHccccccccccccccceEeecCccccc------ccCcccccccchhhhhhccccc
Confidence 6666666555555543 24566677777766410 1124556666777777777664
No 81
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=316.95 Aligned_cols=238 Identities=25% Similarity=0.328 Sum_probs=171.9
Q ss_pred CCCCCceeecccCceeEEecccc------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEe
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF 728 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~ 728 (929)
++|+..+.||+|+||.||++++. ...+.|.+|++++++++||||+++++++.+ ..++||||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~lv~e~ 80 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLN-------PVCLVMEY 80 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEETTEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT-------TTEEEEEC
T ss_pred hHeeeeeEeecCCCceEEEEEECCeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-------CcEEEEEc
Confidence 46788899999999999998765 235679999999999999999999999852 15999999
Q ss_pred cCCCCccccccccc-----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCc-eEEecccccccccccc
Q 002376 729 LSNGSLGDWIHGER-----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMT-AKVGDFGLARFLLERV 796 (929)
Q Consensus 729 ~~~gsL~~~l~~~~-----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~-~ki~DfGla~~~~~~~ 796 (929)
+++|+|.++++... .++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||+++.....
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~- 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH- 159 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-
Confidence 99999999987432 22468999999999943348999999999999998886 799999999754211
Q ss_pred CCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhh
Q 002376 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQ 876 (929)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 876 (929)
.....||+.|+|||++.+..++.++||||+|++++++.....++........++.. .... .......
T Consensus 160 --------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~-~~~~--~~~~~~~-- 226 (307)
T 2eva_A 160 --------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW-AVHN--GTRPPLI-- 226 (307)
T ss_dssp -------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHH-HHHT--TCCCCCB--
T ss_pred --------cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHH-HHhc--CCCCCcc--
Confidence 12346899999999999999999999999998877765554443322211100000 0000 0000001
Q ss_pred hhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhhcc
Q 002376 877 LHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLKQQ 921 (929)
Q Consensus 877 ~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~ 921 (929)
..++..+++++.+||+.||++|||++|+++.|+++.+.++...
T Consensus 227 --~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~ 269 (307)
T 2eva_A 227 --KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGAD 269 (307)
T ss_dssp --TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTT
T ss_pred --cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCC
Confidence 1112223347779999999999999999999999987765433
No 82
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.3e-34 Score=324.83 Aligned_cols=256 Identities=15% Similarity=0.136 Sum_probs=177.1
Q ss_pred hhCCCCCceeecccCceeEEeccccC-----------------cHHH---------------HHHHHHHHHccCCccccc
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG-----------------SWKS---------------FIAECETLRNVRHRNLVK 706 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~---------------~~~E~~~l~~l~Hpniv~ 706 (929)
..++|+..+.||+|+||.||+|.+.. .... +..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 35689999999999999999996531 1112 334555666778999999
Q ss_pred eeeecccCCCCCcceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeec-
Q 002376 707 LITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLD- 776 (929)
Q Consensus 707 l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~- 776 (929)
+++++.... .+..+.++||||+ +|+|.+++.... .++.||+.||+|||+. +|+||||||+|||++
T Consensus 113 ~~~~~~~~~-~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 113 YWGSGLHDK-NGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEEE-TTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEES
T ss_pred EEeeeeecc-CCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEec
Confidence 999987643 2345689999999 999999986431 3467999999999998 999999999999999
Q ss_pred -CCCceEEeccccccccccccCCCC-CccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-
Q 002376 777 -EEMTAKVGDFGLARFLLERVDNQS-SISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE- 853 (929)
Q Consensus 777 -~~~~~ki~DfGla~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~- 853 (929)
.++.+||+|||+|+.+........ ........+||+.|||||++.+..++.++||||+|++++++.....++.....
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 889999999999987653322111 11122345699999999999999999999999999887776655555442111
Q ss_pred -hhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhhc
Q 002376 854 -NVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLKQ 920 (929)
Q Consensus 854 -~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~ 920 (929)
.......................... .+.-+.+++.+||+.||++||+++++++.|+++.+.....
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~ 334 (364)
T 3op5_A 268 PKYVRDSKIRYRENIASLMDKCFPAAN-APGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSK 334 (364)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHSCTTC-CCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhhhhHHHHHHHhccccc-CHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 11000000000000000000000000 1122333777999999999999999999999998875433
No 83
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=5.3e-34 Score=314.38 Aligned_cols=236 Identities=22% Similarity=0.265 Sum_probs=172.4
Q ss_pred CCCCCceeecccCceeEEecccc--------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT--------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~--------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
++|+..+.||+|+||.||+|++. ...+.|.+|++++++++||||+++++++... .
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~ 123 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRG-----R 123 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGG-----G
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-----C
Confidence 46778899999999999998763 1245789999999999999999999998543 3
Q ss_pred eEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..++||||+++|+|.++++... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 124 LAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp CCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred ccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 4799999999999999986332 2367899999999998 999999999999999999999999999987
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
...... .........||+.|+|||++.+..++.++||||+|++++++.. ...++..... .++. ..+.... .
T Consensus 201 ~~~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~-~~~~~~~--~ 272 (325)
T 3kul_A 201 LEDDPD---AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--RDVI-SSVEEGY--R 272 (325)
T ss_dssp CC-------CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH--HHHH-HHHHTTC--C
T ss_pred cccCcc---ceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH--HHHH-HHHHcCC--C
Confidence 643211 1112233456889999999998899999999999987776543 3333222211 1111 0111100 0
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
...... ....+.+++.+||+.||++|||++|++++|+++.+.
T Consensus 273 ~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 273 LPAPMG----CPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp CCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred CCCCCC----cCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 001111 122233377799999999999999999999998764
No 84
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.3e-34 Score=319.47 Aligned_cols=234 Identities=21% Similarity=0.234 Sum_probs=171.8
Q ss_pred CCCCCceeecccCceeEEeccccC---------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG---------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~---------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
++|+..+.||+|+||+||+|++.. ..+.+.+|+.++++++||||++++++|..
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 86 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG------ 86 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB------
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC------
Confidence 478889999999999999987531 12456789999999999999999999842
Q ss_pred ceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
...++||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 87 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 87 SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp SSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred CccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccc
Confidence 23799999999999999986432 2357899999999998 99999999999999999999999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTS 869 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~ 869 (929)
.+..... ........||++|+|||++.+..++.++||||+|++++++.+ ...++..... ..+......
T Consensus 164 ~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-------~~~~~~~~~ 232 (325)
T 3kex_A 164 LLPPDDK----QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL-------AEVPDLLEK 232 (325)
T ss_dssp GSCCCTT----CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT-------THHHHHHHT
T ss_pred ccCcccc----cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH-------HHHHHHHHc
Confidence 7643211 112234568889999999999999999999999987777544 3333322211 111111110
Q ss_pred cc--hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 870 NE--SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 870 ~~--~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
.. ......+. .+. +++.+||+.||++||+++|+++.|+++.+...
T Consensus 233 ~~~~~~~~~~~~---~~~-~li~~~l~~dp~~Rps~~el~~~l~~~~~~~~ 279 (325)
T 3kex_A 233 GERLAQPQICTI---DVY-MVMVKCWMIDENIRPTFKELANEFTRMARDPP 279 (325)
T ss_dssp TCBCCCCTTBCT---TTT-HHHHHHTCSCTTTSCCHHHHHHHHHHHTTSHH
T ss_pred CCCCCCCCcCcH---HHH-HHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 00 00001111 122 27779999999999999999999999876543
No 85
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=4.7e-34 Score=318.46 Aligned_cols=228 Identities=21% Similarity=0.238 Sum_probs=170.7
Q ss_pred hCCCCCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHccCCccccceeeecccCCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSK 717 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 717 (929)
.+.|+..+.||+|+||.||+|+... ..+.+.+|+.++++++||||+++++++.+
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~---- 86 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN---- 86 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC----
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe----
Confidence 4578999999999999999987541 24678999999999999999999999854
Q ss_pred CcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC----ceEEec
Q 002376 718 NMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM----TAKVGD 785 (929)
Q Consensus 718 ~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~----~~ki~D 785 (929)
....++||||+++|+|.+++.... .++.||+.||+|||+. +|+||||||+||++++++ .+||+|
T Consensus 87 -~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~D 162 (361)
T 2yab_A 87 -RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (361)
T ss_dssp -SSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred -CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence 345899999999999999986433 3367899999999998 999999999999998877 799999
Q ss_pred cccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHH
Q 002376 786 FGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQ 865 (929)
Q Consensus 786 fGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 865 (929)
||+++..... ......+||+.|+|||++.+..++.++||||+|+++|++..+..++..... .+.+. .+.
T Consensus 163 FG~a~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~--~~~~~-~i~- 231 (361)
T 2yab_A 163 FGLAHEIEDG-------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLA-NIT- 231 (361)
T ss_dssp CSSCEECCTT-------CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHH-HHH-
T ss_pred cCCceEcCCC-------CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--HHHHH-HHH-
Confidence 9999875321 112345799999999999999999999999999877765544433322111 11111 111
Q ss_pred hhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 866 LMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..........+..++..+++++.+|++.||++|||+.|+++
T Consensus 232 --~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 232 --AVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp --TTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --hcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111111111222333445777999999999999999984
No 86
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.2e-31 Score=296.38 Aligned_cols=291 Identities=24% Similarity=0.334 Sum_probs=148.7
Q ss_pred CCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCC
Q 002376 120 RLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRL 199 (929)
Q Consensus 120 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l 199 (929)
+|+.++++++.++ .+|..+. ++|++|+|++|+|+ .+++..|.++++|++|+|++|+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~-------------------- 87 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNK-------------------- 87 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCC-CBCTTTTTTCTTCCEEECCSSC--------------------
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCC-EeChhhhccCCCCCEEECCCCc--------------------
Confidence 5666666666666 4454443 45666666666665 3444335555555555555554
Q ss_pred CcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEe
Q 002376 200 ENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIR 279 (929)
Q Consensus 200 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~ 279 (929)
+++..|..|.++++|++|+|++|+++ .+|..++ ++|++|++++|++++..+..|.++++|+.|+
T Consensus 88 ------------l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 151 (330)
T 1xku_A 88 ------------ISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVE 151 (330)
T ss_dssp ------------CCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEE
T ss_pred ------------CCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEE
Confidence 44444444445555555555555544 3343332 3444444444444444444555556666666
Q ss_pred ccCccCcC--CccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccE
Q 002376 280 MTHNLLEG--TLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSK 357 (929)
Q Consensus 280 Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~ 357 (929)
+++|.++. ..+..|.++++ |++|++++|+++ .+|..+. .+|++
T Consensus 152 l~~n~l~~~~~~~~~~~~l~~-------------------------------L~~L~l~~n~l~-~l~~~~~---~~L~~ 196 (330)
T 1xku_A 152 LGTNPLKSSGIENGAFQGMKK-------------------------------LSYIRIADTNIT-TIPQGLP---PSLTE 196 (330)
T ss_dssp CCSSCCCGGGBCTTGGGGCTT-------------------------------CCEEECCSSCCC-SCCSSCC---TTCSE
T ss_pred CCCCcCCccCcChhhccCCCC-------------------------------cCEEECCCCccc-cCCcccc---ccCCE
Confidence 66665542 33333434444 444444444443 2333222 24555
Q ss_pred EEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCccc
Q 002376 358 LYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNEL 437 (929)
Q Consensus 358 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 437 (929)
|++++|++++..|..|.++++|++|+|++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|++|++++|++
T Consensus 197 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i 275 (330)
T 1xku_A 197 LHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNI 275 (330)
T ss_dssp EECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCC
T ss_pred EECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcC
Confidence 555555555555555555555555555555555554555555555555555555555 4455555555666666666666
Q ss_pred ccccCccccc------ccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCC
Q 002376 438 TGEIPISFGN------FQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNS 492 (929)
Q Consensus 438 ~~~~p~~~~~------l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~ 492 (929)
++..+..|.. ..+|+.|++++|.+... ...|..+..+.+++.+||++|+
T Consensus 276 ~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~------~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 276 SAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYW------EIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGG------GSCGGGGTTCCCGGGEEC----
T ss_pred CccChhhcCCcccccccccccceEeecCccccc------ccCccccccccceeEEEecccC
Confidence 5544444432 24566666666665421 1124556666667777777664
No 87
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.98 E-value=1.9e-34 Score=319.67 Aligned_cols=227 Identities=23% Similarity=0.258 Sum_probs=162.2
Q ss_pred hhCCCCCceeecccCceeEEecccc-----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERT-----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~-----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
..++|+..+.||+|+||+||+|++. ...+.+.+|++++++++||||+++++++... ..
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~-----~~ 82 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETA-----NK 82 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECS-----SE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeC-----CE
Confidence 4578999999999999999998753 1234688999999999999999999998543 35
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+|+...
T Consensus 83 ~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 159 (347)
T 3zgw_A 83 IFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPK 159 (347)
T ss_dssp EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC--
T ss_pred EEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCccccc
Confidence 899999999999999885332 3467999999999998 99999999999999999999999999987643
Q ss_pred cccCCCCCccccceeccccccccccccCCCCC-CCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERP-STAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
.. ........+||+.|+|||++.+..+ +.++||||+|++++++.....++.... ..+........ ...
T Consensus 160 ~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~--~~~~~~~i~~~----~~~ 228 (347)
T 3zgw_A 160 GN-----KDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN--VMALYKKIMRG----KYD 228 (347)
T ss_dssp -----------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHT----CCC
T ss_pred CC-----CCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHcC----CCC
Confidence 21 1112334579999999999998875 899999999987766554433332211 11111111111 111
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.... +...+.+++.+||+.||++|||++|+++
T Consensus 229 ~p~~----~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 229 VPKW----LSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCC----CCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 1111 1122233777999999999999999985
No 88
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.98 E-value=2.9e-34 Score=316.23 Aligned_cols=225 Identities=23% Similarity=0.299 Sum_probs=169.2
Q ss_pred hhCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
..++|+..+.||+|+||.||+|++.. ..+.+.+|+++++.++||||+++++++.. ..
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-----~~ 87 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET-----EK 87 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----CC
Confidence 35689999999999999999987631 23568899999999999999999999854 33
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
..|+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 164 (328)
T 3fe3_A 88 TLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEF 164 (328)
T ss_dssp EEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGG
T ss_pred EEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceec
Confidence 5899999999999999886432 3467999999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCC-CCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPS-TAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
... ......+||+.|+|||++.+..++ .++||||+|++++++..+..++.... ..+........ ..
T Consensus 165 ~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~i~~~----~~ 231 (328)
T 3fe3_A 165 TVG-------GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN--LKELRERVLRG----KY 231 (328)
T ss_dssp SSS-------CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHC----CC
T ss_pred CCC-------CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC--HHHHHHHHHhC----CC
Confidence 321 123345799999999999988875 79999999987776654443332211 11111111111 11
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..... ++.-+.+++.+|++.||++|||++|+++
T Consensus 232 ~~p~~----~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 232 RIPFY----MSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp CCCTT----SCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred CCCCC----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111 1222334777999999999999999975
No 89
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.98 E-value=1.4e-34 Score=320.81 Aligned_cols=261 Identities=21% Similarity=0.283 Sum_probs=177.9
Q ss_pred hCCCCCceeecccCceeEEeccccC-----------cHHHHHHHHHHHH--ccCCccccceeeecccCCCCCcceEEEEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-----------SWKSFIAECETLR--NVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-----------~~~~~~~E~~~l~--~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
.++|+..+.||+|+||.||+|+..+ ..+.+..|.++.. .++||||+++++++......+....++||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~ 91 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVM 91 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred hHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEE
Confidence 4688999999999999999997652 2445666665544 58999999999866543334455689999
Q ss_pred EecCCCCccccccccc-------cccccHHHHHHHhhhCC------CCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 727 EFLSNGSLGDWIHGER-------KNELDITSALDYLHNDC------EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~------~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
||+++|+|.++++... .++.|++.||+|||+.+ .++|+||||||+|||++.++.+||+|||+++.+.
T Consensus 92 e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~ 171 (336)
T 3g2f_A 92 EYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLT 171 (336)
T ss_dssp CCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred ecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeecc
Confidence 9999999999986433 34679999999999863 2389999999999999999999999999998764
Q ss_pred cccCCC--CCccccceeccccccccccccCC-------CCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhcc---
Q 002376 794 ERVDNQ--SSISSTHVFMGSIGYVPPEYGLG-------ERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQVL--- 859 (929)
Q Consensus 794 ~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~~--- 859 (929)
...... .........+||+.|+|||++.+ ..++.++||||+|++++++.+...++..... .....+
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~ 251 (336)
T 3g2f_A 172 GNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTE 251 (336)
T ss_dssp SSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHH
T ss_pred cccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcc
Confidence 321111 11112234579999999999987 4567899999999888886554333211111 000000
Q ss_pred ---Ch---HHHHhhcccchhhhhhh------HHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhhcc
Q 002376 860 ---DP---ELRQLMTSNESQTIQLH------DCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLKQQ 921 (929)
Q Consensus 860 ---~~---~l~~~~~~~~~~~~~~~------~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~ 921 (929)
.+ ....... ....+...+ ......+.+++.+||+.||++|||++|++++|+++...+.+..
T Consensus 252 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~ 324 (336)
T 3g2f_A 252 VGNHPTFEDMQVLVS-REKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNK 324 (336)
T ss_dssp HCSSCCHHHHHHHHT-TSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC--
T ss_pred cCCCchHHHHHhhhc-ccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhcc
Confidence 00 0000000 000000000 1122233348889999999999999999999999998877554
No 90
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.98 E-value=7.3e-34 Score=308.72 Aligned_cols=239 Identities=23% Similarity=0.338 Sum_probs=171.5
Q ss_pred hCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.++|+..+.||+|+||.||++++.. ..+.|.+|+.++++++||||+++++++.. ..
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-----~~ 84 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEE-----DD 84 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEEC-----SS
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeee-----CC
Confidence 3578999999999999999986541 13578899999999999999999999854 34
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
..++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 161 (294)
T 4eqm_A 85 CYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161 (294)
T ss_dssp EEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred eEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence 5899999999999999986432 3367899999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
... .........||+.|+|||++.+..++.++||||+|+++|++.....++..... .+. ...........
T Consensus 162 ~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~--~~~---~~~~~~~~~~~ 231 (294)
T 4eqm_A 162 SET-----SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA--VSI---AIKHIQDSVPN 231 (294)
T ss_dssp ------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH--HHH---HHHHHSSCCCC
T ss_pred ccc-----cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--HHH---HHHHhhccCCC
Confidence 322 11122345799999999999999999999999999877776554444322211 000 00000000000
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCC-CHHHHHHHHHhhHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRI-GIREALRRLKSSQEI 916 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-s~~ev~~~L~~~~~~ 916 (929)
........++..+.+++.+|++.||++|| +++++.+.|+++...
T Consensus 232 ~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 232 VTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp HHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred cchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 00001111222333477799999999999 899999999887544
No 91
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.98 E-value=1e-33 Score=312.58 Aligned_cols=234 Identities=20% Similarity=0.269 Sum_probs=174.6
Q ss_pred CCCCCceeecccCceeEEecccc---------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
++|+..+.||+|+||.||+|++. ...++|.+|+.++++++||||++++++|....
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 90 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST---- 90 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS----
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC----
Confidence 47888999999999999998753 12457899999999999999999999996422
Q ss_pred ceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
.++|+||+++|+|.++++... .++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+
T Consensus 91 --~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 91 --VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp --EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred --eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCccee
Confidence 689999999999999987432 2467899999999998 99999999999999999999999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCc-hhhhccChHHHHhhc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPE-NVLQVLDPELRQLMT 868 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~-~~~~~~~~~l~~~~~ 868 (929)
...... .........||+.|+|||++.+..++.++||||+|++++++.+ ...++...+. ...+ .+....
T Consensus 166 ~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~----~~~~~~- 236 (327)
T 3poz_A 166 LLGAEE----KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS----ILEKGE- 236 (327)
T ss_dssp HHTTTC----C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH----HHHTTC-
T ss_pred EccCCc----ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHH----HHHcCC-
Confidence 764321 1112233467889999999999999999999999988777554 4444332222 1111 111100
Q ss_pred ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 869 SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
...... .+...+.+ ++.+||+.||++||+|+|+++.|+++.+..
T Consensus 237 -~~~~~~---~~~~~~~~-li~~~l~~~p~~Rps~~ell~~l~~~~~~~ 280 (327)
T 3poz_A 237 -RLPQPP---ICTIDVYM-IMVKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp -CCCCCT---TBCHHHHH-HHHHHTCSCGGGSCCHHHHHHHHHHHHTSH
T ss_pred -CCCCCc---cCCHHHHH-HHHHHcCCChhhCCCHHHHHHHHHHHHhhh
Confidence 000111 11222333 777999999999999999999999987653
No 92
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=5.4e-34 Score=313.53 Aligned_cols=228 Identities=21% Similarity=0.223 Sum_probs=171.1
Q ss_pred hCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
.++|+..+.||+|+||.||+|.... ..+.+.+|+++++.++||||+++++++.+. ...++
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-----~~~~l 78 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESM-----EELVM 78 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEET-----TEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecC-----CEEEE
Confidence 4689999999999999999987641 245688999999999999999999998543 35899
Q ss_pred EEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC--CCceEEeccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE--EMTAKVGDFGLARFLL 793 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~--~~~~ki~DfGla~~~~ 793 (929)
||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++...
T Consensus 79 v~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 79 IFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp EECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred EEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence 999999999999986432 2367899999999998 9999999999999987 7899999999998753
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
.. .......||+.|+|||++.+..++.++||||+|+++|++.....++..... .+.+....... ...
T Consensus 156 ~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~~~----~~~ 222 (321)
T 1tki_A 156 PG-------DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN--QQIIENIMNAE----YTF 222 (321)
T ss_dssp TT-------CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHTC----CCC
T ss_pred CC-------CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH--HHHHHHHHcCC----CCC
Confidence 21 123446799999999999998899999999999877776554443322211 11111111111 111
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.......++..+.+++.+|++.||++|||+.|+++
T Consensus 223 ~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 223 DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111112223334777999999999999999986
No 93
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.98 E-value=1.1e-33 Score=312.44 Aligned_cols=225 Identities=24% Similarity=0.285 Sum_probs=169.1
Q ss_pred hCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.++|+..+.||+|+||+||+++... ..+.+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----~ 78 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH-----D 78 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS-----S
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeC-----C
Confidence 3578899999999999999987641 234678999999999999999999998543 3
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
..|+||||+++|+|.+++...+ .++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 79 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 155 (337)
T 1o6l_A 79 RLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG 155 (337)
T ss_dssp EEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence 5899999999999998886432 3467999999999998 9999999999999999999999999999853
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
... .......+||+.|||||++.+..++.++||||+|+++|++..+..++.... ..+....... ....
T Consensus 156 ~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--~~~~~~~i~~----~~~~ 223 (337)
T 1o6l_A 156 ISD------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--HERLFELILM----EEIR 223 (337)
T ss_dssp CCT------TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHH----CCCC
T ss_pred ccC------CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC--HHHHHHHHHc----CCCC
Confidence 211 112344689999999999999999999999999987777655443332211 1111111111 1111
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRI-----GIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 908 (929)
.. ..+...+++++.+|++.||++|| +++|+++
T Consensus 224 ~p----~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 224 FP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp CC----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CC----CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 11 11222233477799999999999 8888875
No 94
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.98 E-value=1.2e-33 Score=312.57 Aligned_cols=234 Identities=20% Similarity=0.316 Sum_probs=167.8
Q ss_pred hCCCCCceeecccCceeEEecccc-----------------CcHHHHHHHHHHHHccCCccccceeeecccCCC------
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT-----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDS------ 716 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~-----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~------ 716 (929)
.++|+..+.||+|+||.||+|++. ...+.+.+|++++++++|||||+++++|.+...
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457888999999999999998764 134678999999999999999999999865432
Q ss_pred ----------------------------------------------CCcceEEEEEEecCCCCccccccccc--------
Q 002376 717 ----------------------------------------------KNMEFLALVYEFLSNGSLGDWIHGER-------- 742 (929)
Q Consensus 717 ----------------------------------------------~~~~~~~lV~e~~~~gsL~~~l~~~~-------- 742 (929)
....+.++||||+++|+|.++++...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 11234799999999999999987422
Q ss_pred ---cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCC------ccccceeccccc
Q 002376 743 ---KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSS------ISSTHVFMGSIG 813 (929)
Q Consensus 743 ---~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~------~~~~~~~~gt~~ 813 (929)
.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........... .......+||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 3467999999999998 9999999999999999999999999999876432211100 112234579999
Q ss_pred cccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCch-hhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccc
Q 002376 814 YVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPEN-VLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSC 892 (929)
Q Consensus 814 y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 892 (929)
|+|||++.+..++.++||||+|++++++.. +..+.. ..+.. ...... . ...........+ .+++.+|
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~-----~~~~~~~~~~~~-~~~~~~---~--~~~~~~~~~~~~-~~li~~~ 309 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLY-----SFSTQMERVRII-TDVRNL---K--FPLLFTQKYPQE-HMMVQDM 309 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHS-----CCCCHHHHHHHH-HHHHTT---C--CCHHHHHHCHHH-HHHHHHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHH-----cCCChhHHHHHH-HHhhcc---C--CCcccccCChhH-HHHHHHH
Confidence 999999999999999999999987766532 322221 11100 001110 0 000111111223 3477899
Q ss_pred cCCCCCCCCCHHHHHH
Q 002376 893 TTESPGGRIGIREALR 908 (929)
Q Consensus 893 l~~dP~~RPs~~ev~~ 908 (929)
|+.||++|||++|+++
T Consensus 310 l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 310 LSPSPTERPEATDIIE 325 (332)
T ss_dssp HCSSGGGSCCHHHHHH
T ss_pred ccCCCCcCCCHHHHhh
Confidence 9999999999999985
No 95
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.98 E-value=1e-33 Score=311.55 Aligned_cols=239 Identities=18% Similarity=0.214 Sum_probs=177.2
Q ss_pred CCCCCceeecccCceeEEecccc-----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT-----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~-----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
++|...++||+|+||.||+|++. ...+.+.+|++++++++||||+++++++...+ ....+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~~~ 85 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT---TRHKV 85 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT---TCCEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCC---CceEE
Confidence 46888999999999999998765 12467889999999999999999999986533 23579
Q ss_pred EEEEecCCCCccccccccc-----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeee----cCCCceEEecccc
Q 002376 724 LVYEFLSNGSLGDWIHGER-----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILL----DEEMTAKVGDFGL 788 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~-----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl----~~~~~~ki~DfGl 788 (929)
+||||+++|+|.++++... .++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 9999999999999987432 2367899999999998 99999999999999 7888999999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccC--------CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhc
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGL--------GERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQV 858 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~ 858 (929)
++..... .......||+.|+|||++. +..++.++||||+|++++++.....++..... ...++
T Consensus 163 a~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~ 235 (319)
T 4euu_A 163 ARELEDD-------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235 (319)
T ss_dssp CEECCTT-------CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHH
T ss_pred ceecCCC-------CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHH
Confidence 9876322 1123357999999999986 57799999999999888776665554432221 11111
Q ss_pred cChHHHHhhcc-----------------cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHh
Q 002376 859 LDPELRQLMTS-----------------NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKS 912 (929)
Q Consensus 859 ~~~~l~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 912 (929)
+...+.+.... .........+.+...+.+++.+|++.||++|||++|+++...+
T Consensus 236 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d 306 (319)
T 4euu_A 236 MYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (319)
T ss_dssp HHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred HHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence 11111110000 0000112223455566668889999999999999999988765
No 96
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=1.4e-33 Score=312.97 Aligned_cols=257 Identities=23% Similarity=0.304 Sum_probs=178.0
Q ss_pred HHhhCCCCCceeecccCceeEEeccccC-----------cHHHHHHHHHHHHcc--CCccccceeeecccCCCCCcceEE
Q 002376 657 RRATGNFSHENLIGSGSFGSVLHNERTG-----------SWKSFIAECETLRNV--RHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 657 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~-----------~~~~~~~E~~~l~~l--~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
....++|+..+.||+|+||.||+|++.+ ....+.+|.+++... +||||+++++++..... .....+
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~-~~~~~~ 111 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTG-SWTQLY 111 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG-GGCEEE
T ss_pred cccccceEEEeEeecCCCeEEEEEEECCceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC-CCCceE
Confidence 3445689999999999999999998762 234566677776665 89999999999876432 224689
Q ss_pred EEEEecCCCCccccccccc-------cccccHHHHHHHhhhCC-----CCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDC-----EVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~-----~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
+||||+++|+|.++++... .++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+|||+++.
T Consensus 112 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~ 191 (337)
T 3mdy_A 112 LITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVK 191 (337)
T ss_dssp EEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCcee
Confidence 9999999999999986432 34678999999999752 34899999999999999999999999999986
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCC------CCCCCCcCCCCCcchhHHhhh-----cCCchhhhccC
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTA------GDVPTSESFAGEFNIVKWVES-----NLPENVLQVLD 860 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~------~DV~s~g~~~~~~~~~~~~~~-----~~~~~~~~~~~ 860 (929)
+...... .........||+.|+|||++.+..++.+ +||||+|+++|++.....++. ..|.......+
T Consensus 192 ~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 269 (337)
T 3mdy_A 192 FISDTNE--VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269 (337)
T ss_dssp CC-----------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ecccccc--ccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence 5432111 1111224579999999999988877666 999999988887655522221 11110000000
Q ss_pred ---hHHHHhhc-----ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 861 ---PELRQLMT-----SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 861 ---~~l~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
........ ..........++..++. +++.+||+.||++|||++|+++.|+++.+..
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 270 PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMG-KLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHH-HHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CchhhhHHHHhhhccCccccccchhhHHHHHHH-HHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 01111110 00011111112333344 4888999999999999999999999987754
No 97
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.98 E-value=5.1e-34 Score=321.24 Aligned_cols=237 Identities=22% Similarity=0.283 Sum_probs=174.2
Q ss_pred hhCCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
..++|...+.||+|+||.||+|++.. ..++|.+|++++++++|||||+++++|...+ .
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~ 186 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ-----P 186 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS-----S
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC-----C
Confidence 34678889999999999999987641 1246889999999999999999999996533 3
Q ss_pred EEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.++||||+++|+|.++++... .++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 187 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~ 263 (377)
T 3cbl_A 187 IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREE 263 (377)
T ss_dssp CEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceec
Confidence 799999999999999986432 2367899999999998 9999999999999999999999999999864
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
..... ........+++.|+|||++.++.++.++||||+|++++++.. ...++..... ...........
T Consensus 264 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~-------~~~~~~~~~~~ 332 (377)
T 3cbl_A 264 ADGVY----AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN-------QQTREFVEKGG 332 (377)
T ss_dssp TTSEE----ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH-------HHHHHHHHTTC
T ss_pred CCCce----eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcCC
Confidence 32110 011112246788999999998899999999999987776543 2222222111 11111111110
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
. ...++..+..+.+++.+||+.||++|||++|+++.|+++...
T Consensus 333 ~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 333 R--LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp C--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C--CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 0 001111122233377799999999999999999999998765
No 98
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.98 E-value=1.1e-33 Score=312.06 Aligned_cols=227 Identities=20% Similarity=0.235 Sum_probs=169.1
Q ss_pred CCCCCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCC
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 718 (929)
+.|+..+.||+|+||.||+|+... ..+.+.+|+.++++++||||+++++++..
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----- 85 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN----- 85 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----
Confidence 468889999999999999987541 24679999999999999999999999854
Q ss_pred cceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC----ceEEecc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM----TAKVGDF 786 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~----~~ki~Df 786 (929)
....++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||++++++ .+||+||
T Consensus 86 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp SSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 334899999999999999986433 3367899999999998 999999999999999887 8999999
Q ss_pred ccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHh
Q 002376 787 GLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQL 866 (929)
Q Consensus 787 Gla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 866 (929)
|+++..... .......||+.|+|||++.+..++.++||||+|++++++.....++..... .+.+. .+...
T Consensus 163 g~a~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~-~~~~~ 232 (326)
T 2y0a_A 163 GLAHKIDFG-------NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLA-NVSAV 232 (326)
T ss_dssp TTCEECCTT-------SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHH-HHHHT
T ss_pred CCCeECCCC-------CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH--HHHHH-HHHhc
Confidence 999875321 112335799999999999999999999999999877765544333321111 11110 11110
Q ss_pred hcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 867 MTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
............+..+++++.+||+.||++|||++|+++
T Consensus 233 ---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 233 ---NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp ---CCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ---CCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000011111112223344777999999999999999986
No 99
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.98 E-value=1.3e-34 Score=330.25 Aligned_cols=237 Identities=20% Similarity=0.197 Sum_probs=175.4
Q ss_pred ChHHHHHhhCCCCCceeecccCceeEEeccccCc-------------------HHHHHHHHHHHHccCCccccceeeecc
Q 002376 652 SYDELRRATGNFSHENLIGSGSFGSVLHNERTGS-------------------WKSFIAECETLRNVRHRNLVKLITSCS 712 (929)
Q Consensus 652 ~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~-------------------~~~~~~E~~~l~~l~Hpniv~l~~~~~ 712 (929)
.+++++..+++|+..++||+|+||+||+|+.... .+.+.+|+.++..++|||||+++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 4566677788999999999999999999986521 123789999999999999999999995
Q ss_pred cCCCCCcceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEE
Q 002376 713 SLDSKNMEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKV 783 (929)
Q Consensus 713 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki 783 (929)
+ ....|+|||||++|+|.++++... .++.|++.||+|||+. +||||||||+|||++.++.+||
T Consensus 145 ~-----~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL 216 (437)
T 4aw2_A 145 D-----DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRL 216 (437)
T ss_dssp C-----SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEE
T ss_pred e-----CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEE
Confidence 4 345899999999999999987521 2467899999999998 9999999999999999999999
Q ss_pred eccccccccccccCCCCCccccceeccccccccccccC-----CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhh
Q 002376 784 GDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGL-----GERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVL 856 (929)
Q Consensus 784 ~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~ 856 (929)
+|||+|+..... ........+||+.|||||++. ...++.++||||+|+++|++..+..++..... ...
T Consensus 217 ~DFGla~~~~~~-----~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~ 291 (437)
T 4aw2_A 217 ADFGSCLKLMED-----GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG 291 (437)
T ss_dssp CCCTTCEECCTT-----SCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH
T ss_pred cchhhhhhcccC-----CCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHH
Confidence 999999865321 111223458999999999987 56799999999999887776655544432221 111
Q ss_pred hccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCC--CCCHHHHHH
Q 002376 857 QVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGG--RIGIREALR 908 (929)
Q Consensus 857 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPs~~ev~~ 908 (929)
.++........+. .... ++..+++++.+|+..+|++ ||+++|+++
T Consensus 292 ~i~~~~~~~~~p~---~~~~----~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 292 KIMNHKERFQFPT---QVTD----VSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HHHTHHHHCCCCS---SCCC----SCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred hhhhccccccCCc---cccc----CCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 1211111100110 0001 1222334777999888888 999999875
No 100
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.98 E-value=2.1e-33 Score=301.05 Aligned_cols=234 Identities=27% Similarity=0.344 Sum_probs=174.6
Q ss_pred CCCCCceeecccCceeEEecccc--------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT--------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~--------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
++|+..+.||+|+||.||+|++. ...+++.+|++++++++||||+++++++.+.. ..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~ 84 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA-----PICLVF 84 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-----SEEEEE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----ceEEEE
Confidence 57888899999999999998764 23568999999999999999999999986533 389999
Q ss_pred EecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 727 EFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
||+++|+|.++++..+ .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 161 (269)
T 4hcu_A 85 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161 (269)
T ss_dssp ECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred EeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccccc
Confidence 9999999999986432 2357899999999998 999999999999999999999999999986532211
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTIQ 876 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 876 (929)
.......||+.|+|||++.+..++.++||||+|++++++.. ...++..... .+.. ..+...... .....
T Consensus 162 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~--~~~~-~~~~~~~~~--~~~~~ 231 (269)
T 4hcu_A 162 -----TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--SEVV-EDISTGFRL--YKPRL 231 (269)
T ss_dssp -----HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHH-HHHHTTCCC--CCCTT
T ss_pred -----ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH--HHHH-HHHhcCccC--CCCCc
Confidence 11223457888999999998999999999999977666543 3333222111 1111 111110000 00011
Q ss_pred hhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 877 LHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 877 ~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
....+.+++.+||+.||++||+++|+++.|+++.+.
T Consensus 232 ----~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 232 ----ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ----CCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 112233377799999999999999999999998763
No 101
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=8.2e-36 Score=345.94 Aligned_cols=369 Identities=18% Similarity=0.170 Sum_probs=179.3
Q ss_pred cccceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccc-
Q 002376 143 TELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIY- 221 (929)
Q Consensus 143 ~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~- 221 (929)
++|++|||++|+++.......+..+++|++|+|++|.+++... ..++..+..+++|++|+|++|+++...+..+.
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~----~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~ 78 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARC----KDISSALRVNPALAELNLRSNELGDVGVHCVLQ 78 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHH----HHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHH----HHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHH
Confidence 5677788888877632222235666777777777776532110 01233445556666666666666543333222
Q ss_pred cCC----CCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCC-----
Q 002376 222 NMT----SLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPG----- 292 (929)
Q Consensus 222 ~l~----~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~----- 292 (929)
.+. +|++|+|++|+++..-- +.++..+..+++|+.|++++|.+++..+..
T Consensus 79 ~l~~~~~~L~~L~L~~n~i~~~~~---------------------~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l 137 (461)
T 1z7x_W 79 GLQTPSCKIQKLSLQNCCLTGAGC---------------------GVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGL 137 (461)
T ss_dssp TTCSTTCCCCEEECTTSCCBGGGH---------------------HHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHH
T ss_pred HHhhCCCceeEEEccCCCCCHHHH---------------------HHHHHHHccCCceeEEECCCCcCchHHHHHHHHHH
Confidence 222 45555555555541000 123444555555666666665554322211
Q ss_pred CCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhc----cccccEEEecCCccccc
Q 002376 293 LGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNF----SNELSKLYLGGNHIYGK 368 (929)
Q Consensus 293 ~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~----~~~L~~L~Ls~N~l~~~ 368 (929)
+...++|++|++++|++..... ..+...+..+++|++|+|++|.+++..+..+... ..+|++|+|++|.+++.
T Consensus 138 ~~~~~~L~~L~L~~n~l~~~~~---~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~ 214 (461)
T 1z7x_W 138 LDPQCRLEKLQLEYCSLSAASC---EPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSD 214 (461)
T ss_dssp TSTTCCCCEEECTTSCCBGGGH---HHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTT
T ss_pred hcCCCcceEEECCCCCCCHHHH---HHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHH
Confidence 1123344445554444432110 0011233445566666666666654433333221 11466666666665542
Q ss_pred ----cCCCCCCCCcccEEEeeCCCCCccc-----CccccCCCCCCEEEecCCcCCCC----CcccccCCCCCceecccCc
Q 002376 369 ----IPASIGRLRSLTLLDLSYNSISGEI-----PIEIGQLQGLQVLGLAGNEIPGG----IPNSLANLKKLNQIDLSGN 435 (929)
Q Consensus 369 ----~p~~~~~l~~L~~L~Ls~N~l~~~~-----p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N 435 (929)
++..+..+++|++|+|++|.+++.. +..+..+++|++|++++|++++. ++..+..+++|++|+|++|
T Consensus 215 ~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n 294 (461)
T 1z7x_W 215 NCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGN 294 (461)
T ss_dssp HHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTC
T ss_pred HHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCC
Confidence 3444555566666666666555322 11222355566666666655542 3444555556666666666
Q ss_pred ccccccCccccc-----ccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhc-----Cc
Q 002376 436 ELTGEIPISFGN-----FQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKN-----CK 505 (929)
Q Consensus 436 ~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~-----l~ 505 (929)
.+++..+..+.. .++|+.|++++|.+++.. ...++..+..+++|++|||++|.+++..+..+.. .+
T Consensus 295 ~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~----~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~ 370 (461)
T 1z7x_W 295 ELGDEGARLLCETLLEPGCQLESLWVKSCSFTAAC----CSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGS 370 (461)
T ss_dssp CCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGG----HHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTC
T ss_pred CCchHHHHHHHHHhccCCccceeeEcCCCCCchHH----HHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCC
Confidence 655433332222 145556666666554321 0112344445555555555555555433333332 34
Q ss_pred Ccceeecccccccc----cCCccccCCCCCCEEECCCCcCCC
Q 002376 506 SLEELLMAYNQFSG----PIPNIVAELKGLEVLDLSSNKLSG 543 (929)
Q Consensus 506 ~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~ 543 (929)
+|++|+|++|++++ .+|..+..+++|++|||++|++++
T Consensus 371 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 371 VLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp CCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred ceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 55555555555553 445555555555555555555543
No 102
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.1e-33 Score=317.05 Aligned_cols=237 Identities=20% Similarity=0.227 Sum_probs=173.9
Q ss_pred CCCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCC
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 718 (929)
++|+..+.||+|+||+||+|++. ....++.+|+.++++++|||||++++++....
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--- 147 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL--- 147 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC---
Confidence 57888999999999999998832 12346889999999999999999999986533
Q ss_pred cceEEEEEEecCCCCccccccccc---------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC---c
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER---------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM---T 780 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~---~ 780 (929)
..++||||+++|+|.++++..+ .++.||+.||+|||+. +|+||||||+|||++.++ .
T Consensus 148 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~ 222 (367)
T 3l9p_A 148 --PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRV 222 (367)
T ss_dssp --SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCC
T ss_pred --CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCce
Confidence 3699999999999999987432 2367899999999998 999999999999999554 5
Q ss_pred eEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhcc
Q 002376 781 AKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVL 859 (929)
Q Consensus 781 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~ 859 (929)
+||+|||+|+.+...... .......||+.|+|||++.+..++.++||||+|++++++.. ...++..... .
T Consensus 223 ~kL~DFG~a~~~~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--~--- 293 (367)
T 3l9p_A 223 AKIGDFGMARDIYRAGYY----RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--Q--- 293 (367)
T ss_dssp EEECCCHHHHHHHHHSSC----TTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--H---
T ss_pred EEECCCcccccccccccc----ccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--H---
Confidence 999999999865332111 11233468999999999999999999999999987776543 2222221111 1
Q ss_pred ChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 860 DPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 860 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
.+.......... .........+.+++.+||+.||++||+++||++.|+.+.+...
T Consensus 294 --~~~~~i~~~~~~--~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 294 --EVLEFVTSGGRM--DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp --HHHHHHHTTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred --HHHHHHHcCCCC--CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 111111110000 0001111222337779999999999999999999999887654
No 103
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.97 E-value=2.4e-34 Score=325.59 Aligned_cols=235 Identities=19% Similarity=0.244 Sum_probs=174.9
Q ss_pred hHHHHHhhCCCCCceeecccCceeEEeccccCc-------------------HHHHHHHHHHHHccCCccccceeeeccc
Q 002376 653 YDELRRATGNFSHENLIGSGSFGSVLHNERTGS-------------------WKSFIAECETLRNVRHRNLVKLITSCSS 713 (929)
Q Consensus 653 ~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~-------------------~~~~~~E~~~l~~l~Hpniv~l~~~~~~ 713 (929)
..+++...++|+..++||+|+||+||+|+.... .+.+.+|+.+++.++|||||+++++|.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 355666778999999999999999999876521 2247799999999999999999999954
Q ss_pred CCCCCcceEEEEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecc
Q 002376 714 LDSKNMEFLALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDF 786 (929)
Q Consensus 714 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~Df 786 (929)
....|+||||+++|+|.++++..+ .++.||+.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 141 -----~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DF 212 (410)
T 3v8s_A 141 -----DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 212 (410)
T ss_dssp -----SSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred -----CCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEecc
Confidence 345899999999999999886432 3467999999999998 9999999999999999999999999
Q ss_pred ccccccccccCCCCCccccceeccccccccccccCCCC----CCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhccC
Q 002376 787 GLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER----PSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQVLD 860 (929)
Q Consensus 787 Gla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~~~ 860 (929)
|+|+.+... ........+||+.|||||++.+.. ++.++||||+|+++|++..+..++..... ....+..
T Consensus 213 G~a~~~~~~-----~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~ 287 (410)
T 3v8s_A 213 GTCMKMNKE-----GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN 287 (410)
T ss_dssp TTCEECCTT-----SEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred ceeEeeccC-----CcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHh
Confidence 999865321 111223468999999999998765 88999999999887776655544432221 1111111
Q ss_pred hHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCC--CCCHHHHHH
Q 002376 861 PELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGG--RIGIREALR 908 (929)
Q Consensus 861 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPs~~ev~~ 908 (929)
....... ..... ++..+++++.+|++.+|++ ||+++||++
T Consensus 288 ~~~~~~~----p~~~~----~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 288 HKNSLTF----PDDND----ISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp HHHHCCC----CTTCC----CCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred ccccccC----CCccc----ccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 1110000 00011 2223334777999999998 999999985
No 104
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.97 E-value=2.4e-33 Score=316.46 Aligned_cols=241 Identities=20% Similarity=0.320 Sum_probs=177.7
Q ss_pred hCCCCCceeecccCceeEEecccc------------------------CcHHHHHHHHHHHHcc-CCccccceeeecccC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT------------------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSL 714 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~------------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~ 714 (929)
.++|...+.||+|+||.||+|++. ...+++.+|+++++++ +|||||+++++|...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 467888999999999999998641 1235688999999999 999999999999653
Q ss_pred CCCCcceEEEEEEecCCCCccccccccc------------------------cccccHHHHHHHhhhCCCCCEEecCCCC
Q 002376 715 DSKNMEFLALVYEFLSNGSLGDWIHGER------------------------KNELDITSALDYLHNDCEVPVVHSDLKP 770 (929)
Q Consensus 715 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~------------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~ 770 (929)
+ ..++||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||
T Consensus 148 ~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 219 (382)
T 3tt0_A 148 G-----PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 219 (382)
T ss_dssp S-----SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred C-----ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCc
Confidence 3 3799999999999999986432 2357899999999998 999999999
Q ss_pred CCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhh
Q 002376 771 GNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVES 849 (929)
Q Consensus 771 ~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~ 849 (929)
+|||+++++.+||+|||+|+....... ........||+.|+|||++.+..++.++||||+|++++++.. ...++.
T Consensus 220 ~NIll~~~~~~kL~DFG~a~~~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~ 295 (382)
T 3tt0_A 220 RNVLVTEDNVMKIADFGLARDIHHIDY----YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 295 (382)
T ss_dssp GGEEECTTCCEEECSCSCCCCSSCCCT----TCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred ceEEEcCCCcEEEcccCcccccccccc----cccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999986532211 112233467899999999999999999999999987766543 322222
Q ss_pred cCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhhcc
Q 002376 850 NLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLKQQ 921 (929)
Q Consensus 850 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~ 921 (929)
... ..++. ..+..... ........+ ++. +++.+||+.||++|||++|+++.|+++......+.
T Consensus 296 ~~~--~~~~~-~~~~~~~~--~~~~~~~~~---~l~-~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~ 358 (382)
T 3tt0_A 296 GVP--VEELF-KLLKEGHR--MDKPSNCTN---ELY-MMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE 358 (382)
T ss_dssp TCC--HHHHH-HHHHTTCC--CCCCSSCCH---HHH-HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC
T ss_pred CCC--HHHHH-HHHHcCCC--CCCCccCCH---HHH-HHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCC
Confidence 111 11111 11111000 000111112 233 37779999999999999999999999987755443
No 105
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.97 E-value=1.1e-33 Score=312.84 Aligned_cols=245 Identities=15% Similarity=0.131 Sum_probs=179.2
Q ss_pred hCCCCCceeecccCceeEEecccc--------------CcHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcceEEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT--------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~--------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
.++|+..+.||+|+||.||+|+.. ...+.+.+|+++++++ +||||+++++++.. ....++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-----~~~~~l 82 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPC-----GKYNAM 82 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEE-----TTEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEec-----CCccEE
Confidence 357899999999999999999753 1234688999999999 99999999999854 335899
Q ss_pred EEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCc-----eEEecccccc
Q 002376 725 VYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMT-----AKVGDFGLAR 790 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~-----~ki~DfGla~ 790 (929)
||||+ +|+|.+++... ..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+|+
T Consensus 83 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~ 158 (330)
T 2izr_A 83 VLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158 (330)
T ss_dssp EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred EEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence 99999 99999998742 13467999999999998 9999999999999998887 9999999998
Q ss_pred ccccccCCC-CCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhc
Q 002376 791 FLLERVDNQ-SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMT 868 (929)
Q Consensus 791 ~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~ 868 (929)
.+....... ..........||+.|+|||++.+..++.++||||+|++++++.....++..... ...+.+.........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~ 238 (330)
T 2izr_A 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRA 238 (330)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHH
T ss_pred eeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhcc
Confidence 764322111 111122456899999999999999999999999999887776655555443322 111111111110000
Q ss_pred ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 869 SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
. . .....+..+++.+ ++.+||+.||++||+++++.+.|+++.+..
T Consensus 239 ~-~--~~~~~~~~p~~~~-li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 239 T-P--IEVLCENFPEMAT-YLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp S-C--HHHHTTTCHHHHH-HHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred C-C--HHHHhccChHHHH-HHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 0 0 0000011223333 778999999999999999999999988765
No 106
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.97 E-value=2.9e-33 Score=308.75 Aligned_cols=238 Identities=19% Similarity=0.237 Sum_probs=172.1
Q ss_pred hCCCCCceeecccCceeEEecccc---------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 718 (929)
.++|+..+.||+|+||.||+|++. ...+.+.+|+.++++++||||++++++|....
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--- 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST--- 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS---
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC---
Confidence 357899999999999999998753 13567999999999999999999999986422
Q ss_pred cceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
.++|+||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 91 ---~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a 164 (327)
T 3lzb_A 91 ---VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA 164 (327)
T ss_dssp ---EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-
T ss_pred ---ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcce
Confidence 689999999999999986432 3367899999999998 9999999999999999999999999999
Q ss_pred cccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCc-hhhhccChHHHHhh
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPE-NVLQVLDPELRQLM 867 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~-~~~~~~~~~l~~~~ 867 (929)
+....... ........||+.|+|||++.+..++.++||||+|++++++.. ...++...+. ...+ .+....
T Consensus 165 ~~~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~----~~~~~~ 236 (327)
T 3lzb_A 165 KLLGAEEK----EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS----ILEKGE 236 (327)
T ss_dssp -------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH----HHHTTC
T ss_pred eEccCccc----cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH----HHHcCC
Confidence 87642211 112233457889999999999999999999999987777544 3333332222 1111 111100
Q ss_pred cccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhhc
Q 002376 868 TSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLKQ 920 (929)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~ 920 (929)
........+. .+. +++.+||+.||++||+++|+++.|+++.+.....
T Consensus 237 --~~~~~~~~~~---~l~-~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~ 283 (327)
T 3lzb_A 237 --RLPQPPICTI---DVY-MIMRKCWMIDADSRPKFRELIIEFSKMARDPQRY 283 (327)
T ss_dssp --CCCCCTTBCH---HHH-HHHHHHTCSSGGGSCCHHHHHHHHHHHHTSHHHH
T ss_pred --CCCCCccCCH---HHH-HHHHHHcCCChhHCcCHHHHHHHHHHHHhCcCce
Confidence 0001111112 223 3777999999999999999999999998665433
No 107
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.97 E-value=1.9e-33 Score=301.03 Aligned_cols=235 Identities=24% Similarity=0.308 Sum_probs=174.0
Q ss_pred hCCCCCceeecccCceeEEeccccC--------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG--------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~--------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV 725 (929)
.++|+..+.||+|+||.||+|+... ..+++.+|++++++++||||+++++++... ...++|
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv 81 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE-----YPIYIV 81 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----SSEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccC-----CceEEE
Confidence 4578889999999999999987652 356799999999999999999999998543 348999
Q ss_pred EEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccccc
Q 002376 726 YEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERV 796 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 796 (929)
|||+++|+|.++++... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~- 157 (268)
T 3sxs_A 82 TEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD- 157 (268)
T ss_dssp EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT-
T ss_pred EEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh-
Confidence 99999999999986432 2367899999999998 9999999999999999999999999999865321
Q ss_pred CCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhh
Q 002376 797 DNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTI 875 (929)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 875 (929)
.........||+.|+|||++.+..++.++||||+|++++++.. ...++..... .+.. ..+.... ......
T Consensus 158 ----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~-~~~~~~~--~~~~~~ 228 (268)
T 3sxs_A 158 ----QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN--SEVV-LKVSQGH--RLYRPH 228 (268)
T ss_dssp ----CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH--HHHH-HHHHTTC--CCCCCT
T ss_pred ----hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh--HHHH-HHHHcCC--CCCCCC
Confidence 1111223456788999999998899999999999977666543 3333322211 0000 0011100 000001
Q ss_pred hhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 876 QLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 876 ~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
..++ .+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 229 ~~~~----~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 229 LASD----TIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp TSCH----HHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred cChH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 1112 233377799999999999999999999988654
No 108
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.3e-35 Score=344.20 Aligned_cols=311 Identities=20% Similarity=0.185 Sum_probs=186.6
Q ss_pred cccEEEeecccCCC----ccCCccccCCCCceEEeeecCCCCcCCcccc----cCCCCcceeeccCCcCCCC----CCCc
Q 002376 201 NLKVLDLTINRLAG----TVPSTIYNMTSLVHLRLASNQLGGEIPYDVR----DTLPNLLDFIYCFNRFTGK----IPGS 268 (929)
Q Consensus 201 ~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~----~~l~~L~~l~l~~N~l~~~----~p~~ 268 (929)
+|++|+|++|+++. .++..|.++++|++|+|++|.+++..+..+. ...++|++|++++|++++. ++..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 45555555555542 3345555555555555555555432222111 1123344444444444432 2344
Q ss_pred ccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCcccccc-CCCCCCCEEEccCCccccc----
Q 002376 269 LHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSL-TNSTHLNYLALDGNQFEGK---- 343 (929)
Q Consensus 269 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~-~~l~~L~~L~Ls~N~l~~~---- 343 (929)
+..+++|+.|++++|.+++..+..+. ..+ ...++|++|+|++|++++.
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~---------------------------~~l~~~~~~L~~L~L~~n~l~~~~~~~ 218 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLC---------------------------QGLKDSPCQLEALKLESCGVTSDNCRD 218 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHH---------------------------HHHHHSCCCCCEEECTTSCCBTTHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHH---------------------------HHHhcCCCCceEEEccCCCCcHHHHHH
Confidence 45556666666666666533221111 001 1234666666666666643
Q ss_pred cCchhhhccccccEEEecCCcccccc-----CCCCCCCCcccEEEeeCCCCCcc----cCccccCCCCCCEEEecCCcCC
Q 002376 344 IPESIGNFSNELSKLYLGGNHIYGKI-----PASIGRLRSLTLLDLSYNSISGE----IPIEIGQLQGLQVLGLAGNEIP 414 (929)
Q Consensus 344 ~p~~~~~~~~~L~~L~Ls~N~l~~~~-----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 414 (929)
++..+..+. +|++|+|++|.+++.. +..+..+++|++|+|++|.+++. ++..+..+++|++|++++|.++
T Consensus 219 l~~~l~~~~-~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~ 297 (461)
T 1z7x_W 219 LCGIVASKA-SLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELG 297 (461)
T ss_dssp HHHHHHHCT-TCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCH
T ss_pred HHHHHHhCC-CccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCc
Confidence 355555554 6777777777766432 23344577888888888888754 5666777888888888888876
Q ss_pred CCCcccccC-----CCCCceecccCcccccc----cCcccccccccceecccCCcCCCCCCCCcccCCchhhhc-----c
Q 002376 415 GGIPNSLAN-----LKKLNQIDLSGNELTGE----IPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISR-----L 480 (929)
Q Consensus 415 ~~~p~~~~~-----l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~-----l 480 (929)
+..+..+.. .++|++|+|++|.+++. ++..+..+++|+.|+|++|++++.. +..+.. .
T Consensus 298 ~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~--------~~~l~~~l~~~~ 369 (461)
T 1z7x_W 298 DEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAG--------VRELCQGLGQPG 369 (461)
T ss_dssp HHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHH--------HHHHHHHHTSTT
T ss_pred hHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccccc--------HHHHHHHHcCCC
Confidence 544443332 26888888888888765 4556667788888888888876432 222322 5
Q ss_pred cCccEEEecCCCCCC----CCCcchhcCcCcceeecccccccccCCcccc-----CCCCCCEEECCCCcCCCcCCc
Q 002376 481 ENVVTIDLSDNSLSG----NLPNSLKNCKSLEELLMAYNQFSGPIPNIVA-----ELKGLEVLDLSSNKLSGSIPS 547 (929)
Q Consensus 481 ~~L~~LdLs~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~~p~ 547 (929)
++|++|+|++|++++ .+|..+..+++|++|+|++|++++.....+. ....|+.|++.++.+....++
T Consensus 370 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~~~~~ 445 (461)
T 1z7x_W 370 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMED 445 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHHH
T ss_pred CceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCHHHHH
Confidence 688899999998886 6788888889999999999988754222211 234677777777776644433
No 109
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=2e-33 Score=315.11 Aligned_cols=240 Identities=23% Similarity=0.300 Sum_probs=165.8
Q ss_pred CCCCceeecccCceeEEecccc--------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 662 NFSHENLIGSGSFGSVLHNERT--------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~--------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.|+..+.||+|+||.||+|+.. ...++|.+|+.++++++|||||+++++|...+ ..
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~----~~ 165 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE----GS 165 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCS----SC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC----CC
Confidence 3566789999999999988642 12467899999999999999999999986433 24
Q ss_pred EEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.++||||+++|+|.++++... .++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++.+
T Consensus 166 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp CEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred eEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccc
Confidence 799999999999999986432 2357899999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccCh--HHHHhhccc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDP--ELRQLMTSN 870 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~ 870 (929)
..... ..........||+.|+|||++.+..++.++||||+|+++|++.+. +..|.......+. .+.... .
T Consensus 243 ~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~----~~~p~~~~~~~~~~~~~~~~~--~ 314 (373)
T 3c1x_A 243 YDKEF--DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR----GAPPYPDVNTFDITVYLLQGR--R 314 (373)
T ss_dssp -----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT----SCCSCTTSCSSCHHHHHHTTC--C
T ss_pred ccccc--ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhC----cCCCCCCCCHHHHHHHHHcCC--C
Confidence 32211 111122334678899999999999999999999999877765431 1112111111111 111100 0
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhhc
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLKQ 920 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~ 920 (929)
...... .+..+.+++.+||+.||++||+++|+++.|+++...+...
T Consensus 315 ~~~p~~----~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 315 LLQPEY----CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp CCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred CCCCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 000111 1122333777999999999999999999999998876543
No 110
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.97 E-value=5e-34 Score=313.78 Aligned_cols=246 Identities=22% Similarity=0.258 Sum_probs=177.6
Q ss_pred CCCceeecccCceeEEecccc---------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 663 FSHENLIGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
|+..+.||+|+||.||++.+. ...+.+.+|++++++++||||+++++++...+ ...
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG---AAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT---TTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCC---Cce
Confidence 488899999999999765421 12456889999999999999999999986532 345
Q ss_pred EEEEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
.++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EEEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 899999999999999987533 3467899999999998 999999999999999999999999999987642
Q ss_pred ccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhh---ccCh-----HHHHh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQ---VLDP-----ELRQL 866 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~---~~~~-----~l~~~ 866 (929)
.. ..........||..|+|||++.+..++.++||||+|++++++.+...++...+....+ .... .+...
T Consensus 187 ~~---~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (318)
T 3lxp_A 187 GH---EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL 263 (318)
T ss_dssp TC---SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred cc---cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHH
Confidence 21 1111123346888999999999989999999999998877766554443322111100 0000 11111
Q ss_pred hcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhh
Q 002376 867 MTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLK 919 (929)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 919 (929)
..... ........+..+.+++.+||+.||++|||++|+++.|+++.+.+..
T Consensus 264 ~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 314 (318)
T 3lxp_A 264 LERGE--RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG 314 (318)
T ss_dssp HHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred Hhccc--CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence 10000 0000111112233377799999999999999999999999999873
No 111
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.97 E-value=9.3e-34 Score=318.89 Aligned_cols=226 Identities=24% Similarity=0.261 Sum_probs=165.8
Q ss_pred hCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCCc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~ 719 (929)
.++|+..++||+|+||+||+++... ..+.+.+|..++.++ +|||||++++++.+ .
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~-----~ 125 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-----E 125 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEEC-----S
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE-----C
Confidence 4578999999999999999987652 123577899999887 89999999999854 3
Q ss_pred ceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
...|+||||+++|+|.+++...+ .++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+.
T Consensus 126 ~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 126 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred CEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 45899999999999999886432 3467999999999998 999999999999999999999999999985
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccC-hHHHHh-hc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLD-PELRQL-MT 868 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~-~~l~~~-~~ 868 (929)
... ........+||+.|||||++.+..++.++||||+|+++|++..+..++..... ....... ..+... ..
T Consensus 203 ~~~------~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~ 276 (396)
T 4dc2_A 203 GLR------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 276 (396)
T ss_dssp CCC------TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH
T ss_pred ccc------CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc
Confidence 321 11223456899999999999999999999999999888776665554432211 0000000 111111 11
Q ss_pred ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCH
Q 002376 869 SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGI 903 (929)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 903 (929)
.... .+..+...+++++.+||+.||++||++
T Consensus 277 ~~~~----~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 277 KQIR----IPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp CCCC----CCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred cccC----CCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 1111 111122233447779999999999996
No 112
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=7.6e-34 Score=316.04 Aligned_cols=241 Identities=19% Similarity=0.274 Sum_probs=176.0
Q ss_pred HhhCCCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHcc-CCccccceeeecccC
Q 002376 658 RATGNFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSL 714 (929)
Q Consensus 658 ~~~~~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~ 714 (929)
...++|+..+.||+|+||.||+|++. ...+.+.+|+.+++++ +||||+++++++...
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 34578899999999999999998751 1235788999999999 899999999998653
Q ss_pred CCCCcceEEEEEEecCCCCccccccccc-------------------------------cccccHHHHHHHhhhCCCCCE
Q 002376 715 DSKNMEFLALVYEFLSNGSLGDWIHGER-------------------------------KNELDITSALDYLHNDCEVPV 763 (929)
Q Consensus 715 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~-------------------------------~~~~~ia~aL~yLH~~~~~~i 763 (929)
+ ..++||||+++|+|.+++...+ .++.|++.||+|||+. +|
T Consensus 122 ~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 193 (344)
T 1rjb_A 122 G-----PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SC 193 (344)
T ss_dssp S-----SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred C-----ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 3 3799999999999999986432 1356899999999998 99
Q ss_pred EecCCCCCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch
Q 002376 764 VHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI 843 (929)
Q Consensus 764 iHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~ 843 (929)
+||||||+||+++.++.+||+|||+++...... .........||+.|+|||++.+..++.++||||+|++++++..
T Consensus 194 vH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t 269 (344)
T 1rjb_A 194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDS----NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269 (344)
T ss_dssp EETTCSGGGEEEETTTEEEECCCGGGSCGGGCT----TSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTT
T ss_pred ccCCCChhhEEEcCCCcEEeCCCccCcccccCc----cceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHc
Confidence 999999999999999999999999998664221 1112234568899999999999999999999999987776543
Q ss_pred -hHHhhhcCCchhhhccChHHHHhhccc--chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhhc
Q 002376 844 -VKWVESNLPENVLQVLDPELRQLMTSN--ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLKQ 920 (929)
Q Consensus 844 -~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~ 920 (929)
...++...+. +.......... .......++ -+.+++.+||+.||++|||+.|+++.|+.+.......
T Consensus 270 ~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 339 (344)
T 1rjb_A 270 LGVNPYPGIPV------DANFYKLIQNGFKMDQPFYATE----EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEA 339 (344)
T ss_dssp TSCCSSTTCCC------SHHHHHHHHTTCCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC------
T ss_pred CCCCCcccCCc------HHHHHHHHhcCCCCCCCCCCCH----HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHH
Confidence 3333322211 11111111111 000111112 2233777999999999999999999999987765543
No 113
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=1.6e-33 Score=313.48 Aligned_cols=237 Identities=20% Similarity=0.238 Sum_probs=168.7
Q ss_pred HHHhhCCCCCceeecccCceeEEecccc---------------------CcHHHHHHHHHHHHccCCccccceeeecccC
Q 002376 656 LRRATGNFSHENLIGSGSFGSVLHNERT---------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSL 714 (929)
Q Consensus 656 l~~~~~~~~~~~~iG~G~~g~Vy~~~~~---------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~ 714 (929)
+....++|+..+.||+|+||.||+|+.. ...+.+.+|++++++++|||||++++++.+
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~- 99 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED- 99 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc-
Confidence 4455678999999999999999998654 123578899999999999999999999954
Q ss_pred CCCCcceEEEEEEecCCCCccccccc------------------------------------------------cccccc
Q 002376 715 DSKNMEFLALVYEFLSNGSLGDWIHG------------------------------------------------ERKNEL 746 (929)
Q Consensus 715 ~~~~~~~~~lV~e~~~~gsL~~~l~~------------------------------------------------~~~~~~ 746 (929)
....++||||+++|+|.+++.. ...++.
T Consensus 100 ----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 175 (345)
T 3hko_A 100 ----EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMR 175 (345)
T ss_dssp ----SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHH
T ss_pred ----CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHH
Confidence 3358999999999999998841 012467
Q ss_pred cHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC--ceEEeccccccccccccCCCCCccccceeccccccccccccCC--
Q 002376 747 DITSALDYLHNDCEVPVVHSDLKPGNILLDEEM--TAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG-- 822 (929)
Q Consensus 747 ~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~--~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-- 822 (929)
|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++.+...... .........||+.|+|||++.+
T Consensus 176 qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~ 250 (345)
T 3hko_A 176 QIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG--EYYGMTTKAGTPYFVAPEVLNTTN 250 (345)
T ss_dssp HHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC----------CCCGGGCCHHHHTCSS
T ss_pred HHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCcc--ccccccccCCCccccCchhhccCC
Confidence 899999999998 999999999999998776 8999999999866432111 1112334579999999999875
Q ss_pred CCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCC
Q 002376 823 ERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIG 902 (929)
Q Consensus 823 ~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs 902 (929)
..++.++||||+|++++++.....++..... .+........ ...........+...+.+++.+|++.||++||+
T Consensus 251 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 324 (345)
T 3hko_A 251 ESYGPKCDAWSAGVLLHLLLMGAVPFPGVND--ADTISQVLNK----KLCFENPNYNVLSPLARDLLSNLLNRNVDERFD 324 (345)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHC----CCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCh--HHHHHHHHhc----ccccCCcccccCCHHHHHHHHHHcCCChhHCCC
Confidence 6789999999999877765554443322221 1111111111 100000111112223334777999999999999
Q ss_pred HHHHHH
Q 002376 903 IREALR 908 (929)
Q Consensus 903 ~~ev~~ 908 (929)
+.|+++
T Consensus 325 ~~~~l~ 330 (345)
T 3hko_A 325 AMRALQ 330 (345)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999976
No 114
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.97 E-value=9.4e-34 Score=316.85 Aligned_cols=228 Identities=23% Similarity=0.292 Sum_probs=167.9
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.++|+..+.||+|+||.||+|.... ..+.+.+|++++++++|||||++++++.+. ..
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~-----~~ 102 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE-----SF 102 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----SE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-----CE
Confidence 4578999999999999999987641 235688999999999999999999998543 35
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC---CceEEecccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE---MTAKVGDFGLAR 790 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~---~~~ki~DfGla~ 790 (929)
.|+||||+++|+|.+++.... .++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+++
T Consensus 103 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 103 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp EEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 899999999999998886433 3367899999999998 99999999999999865 459999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhccc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
..... ......+||+.|+|||++.+..++.++||||+|+++|++.....++..... .+.... +... .
T Consensus 180 ~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--~~~~~~-i~~~---~ 246 (362)
T 2bdw_A 180 EVNDS-------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQ-IKAG---A 246 (362)
T ss_dssp CCTTC-------CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH-HHHT---C
T ss_pred EecCC-------cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHH-HHhC---C
Confidence 65321 112345799999999999999999999999999877766544333322111 111111 1110 0
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.......+..+...+++++.+||+.||++||++.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 247 YDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp CCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00011111112223334777999999999999999864
No 115
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.97 E-value=7.4e-34 Score=307.97 Aligned_cols=240 Identities=25% Similarity=0.335 Sum_probs=165.9
Q ss_pred hhCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
..++|+..+.||+|+||.||+|+..+ ..+.|.+|++++++++||||+++++++.. ...+
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~~~~ 95 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA------PQLA 95 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESSSEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------SSCE
T ss_pred CccceeeeeEecCCCCeEEEEEEEcCceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccC------CccE
Confidence 35689999999999999999987652 24678999999999999999999997632 2369
Q ss_pred EEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 96 IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp EEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred EEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccc
Confidence 9999999999999885322 3467899999999998 999999999999999999999999999986532
Q ss_pred ccCCCCCccccceeccccccccccccC---CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGL---GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
.. .........||+.|+|||++. +..++.++||||+|++++++.....++...... ..+.............
T Consensus 173 ~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~ 247 (289)
T 3og7_A 173 WS----GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIEMVGRGSLSPDL 247 (289)
T ss_dssp ---------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH-HHHHHHHHHTSCCCCT
T ss_pred cc----ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH-HHHHHHhcccccCcch
Confidence 11 111223457999999999987 667899999999998777765544444332220 0000000010000000
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQE 915 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~ 915 (929)
. ......++.+.+++.+||+.||++|||++|++++|+++.+
T Consensus 248 --~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 248 --S-KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp --T-SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred --h-hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 0 0000111223337779999999999999999999998753
No 116
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.97 E-value=6.6e-33 Score=319.45 Aligned_cols=232 Identities=25% Similarity=0.336 Sum_probs=174.1
Q ss_pred hCCCCCceeecccCceeEEeccccC------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYE 727 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e 727 (929)
.++|+..+.||+|+||.||+|++.+ ..+.|.+|++++++++|||||++++++...+ ...++|||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~~iv~e 267 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK----GGLYIVTE 267 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTT----SCEEEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCC----CceEEEEE
Confidence 4578888999999999999987652 3568999999999999999999999986533 24899999
Q ss_pred ecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 728 FLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 728 ~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
||++|+|.++++... .++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 342 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 342 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc--
Confidence 999999999987432 2367899999999998 9999999999999999999999999999854211
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTIQ 876 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 876 (929)
.....+++.|+|||++.+..++.++||||+|++++++.. ...++...+. .++. ..+..... ..
T Consensus 343 -------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--~~~~-~~i~~~~~------~~ 406 (450)
T 1k9a_A 343 -------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVV-PRVEKGYK------MD 406 (450)
T ss_dssp -----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT--TTHH-HHHHTTCC------CC
T ss_pred -------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHH-HHHHcCCC------CC
Confidence 112357889999999999999999999999987777543 3333222211 1111 11111100 00
Q ss_pred hhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 877 LHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 877 ~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
.+...+..+.+++.+||+.||++|||++|+++.|+++...
T Consensus 407 ~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 407 APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 1111122233377799999999999999999999998753
No 117
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.97 E-value=4.4e-33 Score=303.27 Aligned_cols=240 Identities=23% Similarity=0.316 Sum_probs=173.1
Q ss_pred CCCCCceeecccCceeEEecccc--------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT--------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~--------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
..|+..+.||+|+||.||+|+.. ...+.+.+|+.++++++||||++++++|...+ .
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~ 100 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE----G 100 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS----S
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCC----C
Confidence 46778899999999999998743 12357889999999999999999999976433 3
Q ss_pred eEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..++||||+++|+|.++++... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 101 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 101 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp CCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred ceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccc
Confidence 4799999999999999986422 2356899999999998 999999999999999999999999999986
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhccc-
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSN- 870 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~- 870 (929)
....... .........||+.|+|||.+.+..++.++||||+|++++++... +..+.......+.. .......
T Consensus 178 ~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~----~~~~~~~~~~~~~~-~~~~~~~~ 250 (298)
T 3f66_A 178 MYDKEYY--SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR----GAPPYPDVNTFDIT-VYLLQGRR 250 (298)
T ss_dssp CSCGGGC--BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT----SCCSSTTSCTTTHH-HHHHTTCC
T ss_pred ccccchh--ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhC----CCCCCccCCHHHHH-HHHhcCCC
Confidence 6432111 11223345688999999999999999999999999776664331 11111111111110 0000000
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
.......++ .+.+++.+||+.||++|||++|++++|+++...+.
T Consensus 251 ~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 251 LLQPEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp CCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred CCCCccCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 000111112 23337779999999999999999999999987654
No 118
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.97 E-value=2.2e-33 Score=305.54 Aligned_cols=249 Identities=16% Similarity=0.128 Sum_probs=181.0
Q ss_pred hCCCCCceeecccCceeEEecccc--------------CcHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcceEEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT--------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~--------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
.++|+..+.||+|+||.||+|+.. ...+.+.+|+.+++++ +|+|++++++++.. ....++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-----~~~~~l 83 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQE-----GLHNVL 83 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEE-----TTEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCC-----CceeEE
Confidence 357899999999999999999853 1235688999999999 79999999999843 335899
Q ss_pred EEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCc-----eEEecccccc
Q 002376 725 VYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMT-----AKVGDFGLAR 790 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~-----~ki~DfGla~ 790 (929)
||||+ +|+|.++++... .++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++
T Consensus 84 v~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 84 VIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred EEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 99999 999999987432 2367899999999998 9999999999999987776 9999999998
Q ss_pred ccccccCCCC-CccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhc
Q 002376 791 FLLERVDNQS-SISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMT 868 (929)
Q Consensus 791 ~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~ 868 (929)
.......... .........||+.|+|||++.+..++.++||||+|++++++.....++..... ...+.+.........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS 239 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccC
Confidence 7643221111 11123456799999999999999999999999999888776665555443322 111111110000000
Q ss_pred ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhhc
Q 002376 869 SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLKQ 920 (929)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~ 920 (929)
. . .......+++.+.+++.+||+.||++||+++++++.|+++.+.....
T Consensus 240 ~-~--~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~ 288 (298)
T 1csn_A 240 T-P--LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTT 288 (298)
T ss_dssp S-C--HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred c-c--HHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCC
Confidence 0 0 00000111223334777999999999999999999999998875533
No 119
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.97 E-value=5.8e-34 Score=315.45 Aligned_cols=246 Identities=17% Similarity=0.238 Sum_probs=179.8
Q ss_pred HHHHhhCCCCCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHcc-CCccccceeeec
Q 002376 655 ELRRATGNFSHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNV-RHRNLVKLITSC 711 (929)
Q Consensus 655 ~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~ 711 (929)
+++...++|+..+.||+|+||.||+|.... ..+.+.+|+++++++ +||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 344556789999999999999999987431 235688999999999 899999999999
Q ss_pred ccCCCCCcceEEEEEEecCCCCccccccccc----------------------cccccHHHHHHHhhhCCCCCEEecCCC
Q 002376 712 SSLDSKNMEFLALVYEFLSNGSLGDWIHGER----------------------KNELDITSALDYLHNDCEVPVVHSDLK 769 (929)
Q Consensus 712 ~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk 769 (929)
...+ ..++||||+++|+|.+++.... .++.|++.||+|||+. +|+|||||
T Consensus 120 ~~~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 191 (333)
T 2i1m_A 120 THGG-----PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVA 191 (333)
T ss_dssp CSSS-----SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCS
T ss_pred ecCC-----ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcc
Confidence 6533 3799999999999999986321 2356899999999998 99999999
Q ss_pred CCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhh
Q 002376 770 PGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVE 848 (929)
Q Consensus 770 ~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~ 848 (929)
|+||+++.++.+||+|||+++...... .........||+.|+|||++.+..++.++||||+|++++++.. ...++
T Consensus 192 p~NIl~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 267 (333)
T 2i1m_A 192 ARNVLLTNGHVAKIGDFGLARDIMNDS----NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267 (333)
T ss_dssp GGGCEEEGGGEEEBCCCGGGCCGGGCT----TSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred cceEEECCCCeEEECcccccccccccc----ceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCC
Confidence 999999999999999999998653321 1111233467889999999999999999999999987776543 22222
Q ss_pred hcCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhhc
Q 002376 849 SNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLKQ 920 (929)
Q Consensus 849 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~ 920 (929)
..... .+.+........... .....++ .+.+++.+||+.||++|||+.|+++.|+++.+.....
T Consensus 268 ~~~~~--~~~~~~~~~~~~~~~--~~~~~~~----~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~ 331 (333)
T 2i1m_A 268 PGILV--NSKFYKLVKDGYQMA--QPAFAPK----NIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRRE 331 (333)
T ss_dssp TTCCS--SHHHHHHHHHTCCCC--CCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHH
T ss_pred cccch--hHHHHHHHhcCCCCC--CCCCCCH----HHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhhcc
Confidence 11111 000001111111000 0111112 2233777999999999999999999999998876543
No 120
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.97 E-value=1.8e-33 Score=306.26 Aligned_cols=229 Identities=20% Similarity=0.270 Sum_probs=164.0
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------------------------------cHHHHHHHHHHHH
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------------------------------SWKSFIAECETLR 697 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------------------------------~~~~~~~E~~~l~ 697 (929)
.++|+..+.||+|+||.||+|+... ..+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 4689999999999999999986531 0246889999999
Q ss_pred ccCCccccceeeecccCCCCCcceEEEEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCC
Q 002376 698 NVRHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKP 770 (929)
Q Consensus 698 ~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~ 770 (929)
+++||||+++++++.+. .....++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||
T Consensus 92 ~l~h~~iv~~~~~~~~~---~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 165 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDP---NEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKP 165 (298)
T ss_dssp TCCCTTBCCEEEEEECS---SSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCG
T ss_pred hCCCCCCCeEEEEEEcC---CCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCH
Confidence 99999999999998652 2346899999999999998765322 3467899999999998 999999999
Q ss_pred CCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCC---CCCCCCCCCCcCCCCCcchhHHh
Q 002376 771 GNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER---PSTAGDVPTSESFAGEFNIVKWV 847 (929)
Q Consensus 771 ~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DV~s~g~~~~~~~~~~~~ 847 (929)
+||+++.++.+||+|||+++..... ........||+.|+|||++.+.. ++.++||||+|++++++.....+
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p 239 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGS------DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSS------SCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCS
T ss_pred HHEEECCCCCEEEecCCCccccccc------cccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCC
Confidence 9999999999999999999865321 11123457999999999998765 37889999999877665444333
Q ss_pred hhcCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 848 ESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 848 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
+.... ..... ..+...... .......++ .+++++.+||+.||++|||++|+++
T Consensus 240 f~~~~--~~~~~-~~~~~~~~~-~~~~~~~~~----~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 240 FMDER--IMCLH-SKIKSQALE-FPDQPDIAE----DLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp SCCSS--HHHHH-HHHHHCCCC-CCSSSCCCH----HHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCcc--HHHHH-HHHhcccCC-CCCccccCH----HHHHHHHHHhhcChhhCCCHHHHhc
Confidence 22111 11110 111110000 000111112 2333777999999999999999864
No 121
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.97 E-value=6.5e-33 Score=317.41 Aligned_cols=230 Identities=22% Similarity=0.198 Sum_probs=167.4
Q ss_pred hhCCCCCceeecccCceeEEecccc------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERT------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
..++|+..+.||+|+||.||+|... ...+.+.+|++++++++|||||++++++.+ ..
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-----~~ 83 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-----EG 83 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEEC-----SS
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEE-----CC
Confidence 3467899999999999999998654 123568899999999999999999999854 34
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeec---CCCceEEeccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLD---EEMTAKVGDFGLA 789 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~---~~~~~ki~DfGla 789 (929)
..|+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||++ +++.+||+|||+|
T Consensus 84 ~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a 160 (444)
T 3soa_A 84 HHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLA 160 (444)
T ss_dssp EEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred EEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence 5899999999999998886433 3467899999999998 999999999999998 5678999999999
Q ss_pred cccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcc
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTS 869 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 869 (929)
+..... .......+||++|||||++.+..++.++||||+|+++|++..+..++.... ..+.......+...
T Consensus 161 ~~~~~~------~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~--~~~~~~~i~~~~~~- 231 (444)
T 3soa_A 161 IEVEGE------QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED--QHRLYQQIKAGAYD- 231 (444)
T ss_dssp BCCCTT------CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHTCCC-
T ss_pred EEecCC------CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHHhCCCC-
Confidence 865321 112234579999999999999999999999999987776544433322111 11111111111110
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.....+..++..+++++.+|++.||++|||+.|+++
T Consensus 232 ---~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 232 ---FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp ---CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ---CCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 001111112223334777999999999999999986
No 122
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.97 E-value=1.3e-33 Score=314.20 Aligned_cols=249 Identities=16% Similarity=0.121 Sum_probs=170.9
Q ss_pred CCCCCceeecccCceeEEeccccC------------------------------cHHHHHHHHHHHHccCCccccceeee
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG------------------------------SWKSFIAECETLRNVRHRNLVKLITS 710 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~------------------------------~~~~~~~E~~~l~~l~Hpniv~l~~~ 710 (929)
++|+..+.||+|+||.||+|+... ..+.+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 578899999999999999997642 01235678888899999999999999
Q ss_pred cccCCCCCcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC--c
Q 002376 711 CSSLDSKNMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM--T 780 (929)
Q Consensus 711 ~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~--~ 780 (929)
+.... .+....|+||||+ +|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++ .
T Consensus 117 ~~~~~-~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 117 GLTEF-KGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEES-SSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTS
T ss_pred ccccc-CCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCc
Confidence 86632 2345689999999 999999987543 3367899999999998 999999999999999887 9
Q ss_pred eEEeccccccccccccCCC-CCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhh
Q 002376 781 AKVGDFGLARFLLERVDNQ-SSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQ 857 (929)
Q Consensus 781 ~ki~DfGla~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~ 857 (929)
+||+|||+|+.+....... ..........||+.|+|||++.+..++.++||||+|++++++.....++..... ....
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 271 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ 271 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence 9999999998764332211 111222455799999999999999999999999999888776665554432111 0000
Q ss_pred ccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHH
Q 002376 858 VLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQE 915 (929)
Q Consensus 858 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~ 915 (929)
..........+........ ...++.-+.+++.+||+.||++||+++++++.|+++..
T Consensus 272 ~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 272 TAKTNLLDELPQSVLKWAP-SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHTTTHHHHHHSC-TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHhhcccccHHHHhhcc-ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 0001111100000000000 00111223337779999999999999999999998644
No 123
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.97 E-value=1e-33 Score=314.89 Aligned_cols=226 Identities=25% Similarity=0.265 Sum_probs=164.5
Q ss_pred hhCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCC
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~ 718 (929)
..++|+..++||+|+||+||+|+... ..+.+.+|..+++.+ +|||||++++++.+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~----- 95 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT----- 95 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe-----
Confidence 35689999999999999999987651 234577899999988 79999999999854
Q ss_pred cceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
....|+||||+++|+|.+++...+ .++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+
T Consensus 96 ~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~ 172 (353)
T 3txo_A 96 PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK 172 (353)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEcccccee
Confidence 335899999999999999886432 3467999999999998 99999999999999999999999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhccc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
.... ........+||+.|||||++.+..++.++||||+|+++|++.....++.... ..++...... ..
T Consensus 173 ~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--~~~~~~~i~~----~~ 240 (353)
T 3txo_A 173 EGIC------NGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN--EDDLFEAILN----DE 240 (353)
T ss_dssp CSCC---------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHH----CC
T ss_pred eccc------CCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC--HHHHHHHHHc----CC
Confidence 5321 1122345689999999999998899999999999987777655444332221 1111111111 11
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCH------HHHHH
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGI------REALR 908 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~------~ev~~ 908 (929)
...... +...+.+++.+|++.||++||++ +|+++
T Consensus 241 ~~~p~~----~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 241 VVYPTW----LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CCCCTT----SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CCCCCC----CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 111111 22223347779999999999998 66664
No 124
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.97 E-value=3e-33 Score=301.79 Aligned_cols=236 Identities=21% Similarity=0.246 Sum_probs=164.6
Q ss_pred hCCCCCceeecccCceeEEeccccC--------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG--------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~--------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
.++|+..+.||+|+||.||+|.+.. ..+.|.+|+.++++++||||+++++++.+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 87 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE------ 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS------
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc------
Confidence 4578889999999999999987531 13568899999999999999999999843
Q ss_pred ceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
...++||||+++|+|.++++... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 88 NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred CccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccc
Confidence 12699999999999999986432 2357899999999998 99999999999999999999999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTS 869 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~ 869 (929)
...... ........+|+.|+|||++.+..++.++||||+|++++++.+ ...++..... .+.. ..+....
T Consensus 165 ~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~--~~~~-~~i~~~~-- 234 (281)
T 1mp8_A 165 YMEDST-----YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVI-GRIENGE-- 234 (281)
T ss_dssp -------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHH-HHHHTTC--
T ss_pred ccCccc-----ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH--HHHH-HHHHcCC--
Confidence 763221 111223457889999999998899999999999987766543 2222222111 0100 0111100
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
....... .+..+.+++.+||+.||++|||+.|+++.|+++.+...
T Consensus 235 ~~~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 279 (281)
T 1mp8_A 235 RLPMPPN----CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279 (281)
T ss_dssp CCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCC----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence 0001111 12223337779999999999999999999999877643
No 125
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.97 E-value=6e-34 Score=314.51 Aligned_cols=247 Identities=22% Similarity=0.230 Sum_probs=174.7
Q ss_pred CCCCCceeecccCceeEEeccc----c----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 661 GNFSHENLIGSGSFGSVLHNER----T----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~----~----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
++|+..+.||+|+||.||++++ . ...+.+.+|++++++++||||+++++++... ...
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~ 99 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGP---GRQ 99 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS---SSC
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC---CCc
Confidence 5788899999999999999873 1 1235689999999999999999999998642 334
Q ss_pred eEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..++||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred eEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccccee
Confidence 5899999999999999986422 2357899999999998 999999999999999999999999999987
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhcc-----C---hHH
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVL-----D---PEL 863 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~l 863 (929)
...... .........||+.|+|||++.+..++.++||||+|++++++.....++........... . ..+
T Consensus 177 ~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T 3lxl_A 177 LPLDKD---YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL 253 (327)
T ss_dssp CCTTCS---EEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHH
T ss_pred cccCCc---cceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHH
Confidence 642211 11112334688999999999998999999999999887776554333221111100000 0 011
Q ss_pred HHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 864 RQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
........ ...........+.+++.+||+.||++|||++|+++.|+++.....
T Consensus 254 ~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 254 LELLEEGQ--RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp HHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred HHHhhccc--CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 11110000 000011112223337779999999999999999999999877644
No 126
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.97 E-value=6.9e-34 Score=313.84 Aligned_cols=223 Identities=25% Similarity=0.309 Sum_probs=166.6
Q ss_pred hCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.++|...+.||+|+||+||+|++.. ..+.+.+|+++++.++||||+++++++... .
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-----~ 82 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTP-----T 82 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECS-----S
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-----C
Confidence 4689999999999999999998641 124688999999999999999999998653 3
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
..++||||+ +|+|.+++.... .++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 83 ~~~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~ 158 (336)
T 3h4j_B 83 DIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158 (336)
T ss_dssp EEEEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred EEEEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence 489999999 789988875332 3467999999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCC-CCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERP-STAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
... ......+||+.|+|||++.+..+ +.++||||+|++++++..+..++.... ..+........ ..
T Consensus 159 ~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~--~~~~~~~i~~~----~~ 225 (336)
T 3h4j_B 159 TDG-------NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF--IPNLFKKVNSC----VY 225 (336)
T ss_dssp TTS-------BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSS--STTCBCCCCSS----CC
T ss_pred cCC-------cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCcc--HHHHHHHHHcC----CC
Confidence 321 11234579999999999988876 789999999987776655444332211 11111110000 00
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
. .++.++..+++++.+|++.||++|||++|+++
T Consensus 226 ~----~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 226 V----MPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp C----CCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred C----CcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 0 00111222334777999999999999999975
No 127
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.97 E-value=4.4e-33 Score=305.48 Aligned_cols=222 Identities=19% Similarity=0.244 Sum_probs=168.1
Q ss_pred hCCCCCceeecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.++|+..+.||+|+||+||+++.. ...+.+.+|+.+++.++||||+++++++.+ ..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-----~~ 79 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD-----AQ 79 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-----SS
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe-----CC
Confidence 357889999999999999998764 123567789999999999999999999854 33
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
..|+||||+++|+|.++++... .++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~ 156 (318)
T 1fot_A 80 QIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV 156 (318)
T ss_dssp EEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred EEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceec
Confidence 5899999999999999986432 3467899999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
.. .....+||+.|+|||++.+..++.++||||+|+++|++.....++..... .+....... ....
T Consensus 157 ~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~----~~~~ 221 (318)
T 1fot_A 157 PD---------VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT--MKTYEKILN----AELR 221 (318)
T ss_dssp SS---------CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHH----CCCC
T ss_pred CC---------ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHh----CCCC
Confidence 31 12345799999999999999999999999999877776554433322111 111111111 1111
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRI-----GIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 908 (929)
.... +..-+++++.+|++.||++|| +++|+++
T Consensus 222 ~p~~----~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 222 FPPF----FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp CCTT----SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred CCCC----CCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 1111 122233477799999999999 8888873
No 128
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.97 E-value=1.8e-33 Score=316.52 Aligned_cols=228 Identities=21% Similarity=0.231 Sum_probs=168.9
Q ss_pred hCCCCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
.++|+..+.||+|+||.||+|.... ....+.+|++++++++|||||++++++.+ ....+
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-----~~~~~ 124 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED-----KYEMV 124 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC-----SSEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe-----CCEEE
Confidence 4679999999999999999987641 23468899999999999999999999854 34589
Q ss_pred EEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC--CCceEEecccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE--EMTAKVGDFGLARFL 792 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~--~~~~ki~DfGla~~~ 792 (929)
+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++..
T Consensus 125 lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 125 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp EEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceec
Confidence 9999999999999886432 2367899999999998 9999999999999974 578999999999875
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
... .......||+.|+|||++.+..++.++||||+|++++++.....++..... .+.+.. +.. ....
T Consensus 202 ~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~~~~-i~~---~~~~ 268 (387)
T 1kob_A 202 NPD-------EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--LETLQN-VKR---CDWE 268 (387)
T ss_dssp CTT-------SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHH-HHH---CCCC
T ss_pred CCC-------cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH--HHHHHH-HHh---CCCC
Confidence 321 122345799999999999999999999999999877776554433322111 111111 111 0000
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
........+...+++++.+||+.||++|||++|+++
T Consensus 269 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 269 FDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp CCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 000111112222334777999999999999999986
No 129
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.97 E-value=1.2e-33 Score=306.17 Aligned_cols=226 Identities=22% Similarity=0.282 Sum_probs=169.0
Q ss_pred CCCCCceeecccCceeEEecccc-----------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCC
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT-----------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSK 717 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~-----------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 717 (929)
++|...+.||+|+||.||+|+.. ...+.|.+|++++++++||||+++++++...+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 85 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD-- 85 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT--
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC--
Confidence 57888999999999999998543 12467899999999999999999999996533
Q ss_pred CcceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCc--------
Q 002376 718 NMEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMT-------- 780 (929)
Q Consensus 718 ~~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~-------- 780 (929)
..++||||+++|+|.++++... .++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 86 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 86 ---ENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp ---CCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred ---CCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccce
Confidence 3699999999999999987433 2367899999999998 9999999999999998887
Q ss_pred eEEeccccccccccccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHH-hhhcCCchhhhc
Q 002376 781 AKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKW-VESNLPENVLQV 858 (929)
Q Consensus 781 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~-~~~~~~~~~~~~ 858 (929)
+||+|||+++.... .....||+.|+|||++.+ ..++.++||||+|++++++..... ++.....
T Consensus 160 ~kl~Dfg~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~----- 224 (289)
T 4fvq_A 160 IKLSDPGISITVLP----------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS----- 224 (289)
T ss_dssp EEECCCCSCTTTSC----------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----
T ss_pred eeeccCcccccccC----------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch-----
Confidence 99999999875421 123468999999999988 679999999999987776544211 1111110
Q ss_pred cChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHH
Q 002376 859 LDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQE 915 (929)
Q Consensus 859 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~ 915 (929)
.................++.+. +++.+||+.||++|||++|+++.|+++..
T Consensus 225 --~~~~~~~~~~~~~~~~~~~~l~----~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 225 --QRKLQFYEDRHQLPAPKAAELA----NLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp --HHHHHHHHTTCCCCCCSSCTTH----HHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred --HHHHHHhhccCCCCCCCCHHHH----HHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 0111111111111111112222 36679999999999999999999999765
No 130
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.97 E-value=7.8e-33 Score=308.39 Aligned_cols=227 Identities=22% Similarity=0.221 Sum_probs=166.9
Q ss_pred CCCCCceeecccCceeEEeccccC---------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG---------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~---------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
+.|+..+.||+|+||.||+|.... ..+.+.+|+.+++.++|||||++++++.+.
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~----- 98 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSD----- 98 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-----
Confidence 468889999999999999986541 246789999999999999999999998543
Q ss_pred ceEEEEEEecCCCCcccccccc------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCc---eEEe
Q 002376 720 EFLALVYEFLSNGSLGDWIHGE------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMT---AKVG 784 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~---~ki~ 784 (929)
...|+||||+++|+|.+++... ..++.||+.||+|||+. +|+||||||+|||++.++. +||+
T Consensus 99 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~ 175 (351)
T 3c0i_A 99 GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLG 175 (351)
T ss_dssp TEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEEC
T ss_pred CEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEe
Confidence 3589999999999998877532 12357999999999998 9999999999999986654 9999
Q ss_pred ccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHH
Q 002376 785 DFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELR 864 (929)
Q Consensus 785 DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 864 (929)
|||+++..... .......+||+.|+|||++.+..++.++||||+|+++|++.....++....+ +.......
T Consensus 176 Dfg~a~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~i~~ 246 (351)
T 3c0i_A 176 GFGVAIQLGES------GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---RLFEGIIK 246 (351)
T ss_dssp CCTTCEECCTT------SCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---HHHHHHHH
T ss_pred cCcceeEecCC------CeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---HHHHHHHc
Confidence 99999876321 1112345799999999999999999999999999877765544333322111 11111111
Q ss_pred HhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 865 QLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
. ........+..++..+++++.+||+.||++|||+.|+++
T Consensus 247 ~----~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 247 G----KYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp T----CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred C----CCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1 111111111112233344777999999999999999974
No 131
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.5e-31 Score=296.77 Aligned_cols=294 Identities=18% Similarity=0.243 Sum_probs=198.9
Q ss_pred CCCCCCCCCCCcceeeCCCCCcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCC
Q 002376 51 YWNPSSSPCTWPGVICNNFGNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNN 130 (929)
Q Consensus 51 ~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 130 (929)
.|.+...+|.|.|+ |+ +++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 22 ~~~~~~~~C~~~~~-c~----------~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 87 (353)
T 2z80_A 22 SSNQASLSCDRNGI-CK----------GSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNG 87 (353)
T ss_dssp -----CCEECTTSE-EE----------CCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred CCCccCCCCCCCeE-ee----------CCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCc
Confidence 46566778999987 64 3455666 6777665 589999999999998777799999999999999999
Q ss_pred CCCCcccccccccccceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecc
Q 002376 131 LQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTIN 210 (929)
Q Consensus 131 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N 210 (929)
+++..|..|.++++|++|+|++|+++ .++...|.++++|++|+|++|++++ +|. ...|..+++|++|++++|
T Consensus 88 l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~-l~~------~~~~~~l~~L~~L~l~~n 159 (353)
T 2z80_A 88 INTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKT-LGE------TSLFSHLTKLQILRVGNM 159 (353)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCS-SCCHHHHTTCTTCSEEECTTCCCSS-SCS------SCSCTTCTTCCEEEEEES
T ss_pred cCccCHhhcCCCCCCCEEECCCCcCC-cCCHhHhCCCccCCEEECCCCCCcc-cCc------hhhhccCCCCcEEECCCC
Confidence 99888889999999999999999998 6888879999999999999998853 221 135788999999999999
Q ss_pred -cCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCc
Q 002376 211 -RLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTL 289 (929)
Q Consensus 211 -~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 289 (929)
.+....+..|.++++|++|++++|++++..|..+.. +++|++|++++|+++...+..+..+++|+.|++++|.+++..
T Consensus 160 ~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~-l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~ 238 (353)
T 2z80_A 160 DTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKS-IQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFH 238 (353)
T ss_dssp SSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT-CSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCC
T ss_pred ccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhc-cccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccc
Confidence 577777888999999999999999888544544433 556666666666654333333334555666666666555433
Q ss_pred cCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCcccccc
Q 002376 290 PPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKI 369 (929)
Q Consensus 290 p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~ 369 (929)
+..+. .......++.++|++|.+++. .+. .+
T Consensus 239 ~~~l~----------------------------~~~~~~~l~~l~L~~~~l~~~--------------------~l~-~l 269 (353)
T 2z80_A 239 FSELS----------------------------TGETNSLIKKFTFRNVKITDE--------------------SLF-QV 269 (353)
T ss_dssp CC----------------------------------CCCCCCEEEEESCBCCHH--------------------HHH-HH
T ss_pred ccccc----------------------------cccccchhhccccccccccCc--------------------chh-hh
Confidence 21111 112233455555555554431 111 23
Q ss_pred CCCCCCCCcccEEEeeCCCCCcccCcc-ccCCCCCCEEEecCCcCCCCC
Q 002376 370 PASIGRLRSLTLLDLSYNSISGEIPIE-IGQLQGLQVLGLAGNEIPGGI 417 (929)
Q Consensus 370 p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~ 417 (929)
|..+..+++|++|+|++|+++. +|.. |..+++|++|+|++|.+.+..
T Consensus 270 ~~~l~~l~~L~~L~Ls~N~l~~-i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 270 MKLLNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp HHHHHTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred HHHHhcccCCCEEECCCCCCCc-cCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 4445555666666666666653 3333 456666666666666665443
No 132
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.97 E-value=8.5e-33 Score=298.60 Aligned_cols=236 Identities=22% Similarity=0.336 Sum_probs=173.1
Q ss_pred hhCCCCCceeecccCceeEEeccccC--------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG--------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~--------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
..++|+..+.||+|+||.||++++.. ..+++.+|++++++++||||+++++++... ...++
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 96 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ-----RPIFI 96 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSS-----SSEEE
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecC-----CCeEE
Confidence 34578889999999999999987652 357899999999999999999999998543 34899
Q ss_pred EEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 97 ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp EECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence 999999999999986522 2367899999999998 9999999999999999999999999999865322
Q ss_pred cCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQT 874 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 874 (929)
.. .......||+.|+|||++.+..++.++||||+|++++++.. ...++...... +. ...+....... ..
T Consensus 174 ~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--~~-~~~~~~~~~~~--~~ 243 (283)
T 3gen_A 174 EY-----TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ET-AEHIAQGLRLY--RP 243 (283)
T ss_dssp HH-----HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HH-HHHHHTTCCCC--CC
T ss_pred cc-----ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--HH-HHHHhcccCCC--CC
Confidence 11 11223357888999999998999999999999987776543 33333322210 00 01111110000 00
Q ss_pred hhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 875 IQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 875 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
...++ .+.+++.+||+.||++|||++|+++.|+++...
T Consensus 244 ~~~~~----~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 244 HLASE----KVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp TTCCH----HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CcCCH----HHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 11112 233377799999999999999999999998753
No 133
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.97 E-value=7e-33 Score=304.00 Aligned_cols=236 Identities=22% Similarity=0.278 Sum_probs=174.2
Q ss_pred hCCCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSK 717 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 717 (929)
.++|...+.||+|+||.||+|+.. ...+.+.+|++++++++||||+++++++...+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-- 99 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG-- 99 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC--
Confidence 467888999999999999998641 12357889999999999999999999986533
Q ss_pred CcceEEEEEEecCCCCccccccccc--------------------------------cccccHHHHHHHhhhCCCCCEEe
Q 002376 718 NMEFLALVYEFLSNGSLGDWIHGER--------------------------------KNELDITSALDYLHNDCEVPVVH 765 (929)
Q Consensus 718 ~~~~~~lV~e~~~~gsL~~~l~~~~--------------------------------~~~~~ia~aL~yLH~~~~~~iiH 765 (929)
..++||||+++|+|.+++...+ .++.|++.||+|||+. +|+|
T Consensus 100 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH 173 (314)
T 2ivs_A 100 ---PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVH 173 (314)
T ss_dssp ---SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred ---ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcc
Confidence 3799999999999999986432 2356899999999998 9999
Q ss_pred cCCCCCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-h
Q 002376 766 SDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-V 844 (929)
Q Consensus 766 rDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~ 844 (929)
|||||+||++++++.+||+|||+++...... .........||+.|+|||++.+..++.++||||+|++++++.. .
T Consensus 174 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 249 (314)
T 2ivs_A 174 RDLAARNILVAEGRKMKISDFGLSRDVYEED----SYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249 (314)
T ss_dssp CCCSGGGEEEETTTEEEECCCTTCEECTTTS----CEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred cccchheEEEcCCCCEEEccccccccccccc----cceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCC
Confidence 9999999999999999999999998653221 1111233467889999999999889999999999987776543 3
Q ss_pred HHhhhcCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 845 KWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
..++..... .+.. ..+..... ...... +...+.+++.+||+.||++||+++|+++.|+++...
T Consensus 250 ~~p~~~~~~--~~~~-~~~~~~~~--~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 250 GNPYPGIPP--ERLF-NLLKTGHR--MERPDN----CSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp CCSSTTCCG--GGHH-HHHHTTCC--CCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCCCCCH--HHHH-HHhhcCCc--CCCCcc----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 222221111 1110 11111000 001111 122233377799999999999999999999998653
No 134
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.97 E-value=2.3e-33 Score=311.87 Aligned_cols=251 Identities=22% Similarity=0.270 Sum_probs=178.0
Q ss_pred HHhhCCCCCceeecccCceeEEeccccC-----------cHHHHHHHHHHHHc--cCCccccceeeecccCCCCCcceEE
Q 002376 657 RRATGNFSHENLIGSGSFGSVLHNERTG-----------SWKSFIAECETLRN--VRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 657 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~-----------~~~~~~~E~~~l~~--l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
....++|+..+.||+|+||.||+|++.+ ..+.+.+|++++.. ++||||+++++++..... .....+
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~-~~~~~~ 116 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNG-TWTQLW 116 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS-SCCCEE
T ss_pred ccccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC-ccceeE
Confidence 3445689999999999999999987652 34678889999887 789999999999866442 223589
Q ss_pred EEEEecCCCCccccccccc-------cccccHHHHHHHhh--------hCCCCCEEecCCCCCCeeecCCCceEEecccc
Q 002376 724 LVYEFLSNGSLGDWIHGER-------KNELDITSALDYLH--------NDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH--------~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGl 788 (929)
+||||+++|+|.++++... .++.|++.||+||| +. +|+||||||+||+++.++.+||+|||+
T Consensus 117 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 193 (342)
T 1b6c_B 117 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLGL 193 (342)
T ss_dssp EEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEEEEECCC
Confidence 9999999999999986432 34679999999999 55 899999999999999999999999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCCCC------CCCCCCCCCCcCCCCCcchh----------HHhhhcCC
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER------PSTAGDVPTSESFAGEFNIV----------KWVESNLP 852 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DV~s~g~~~~~~~~~----------~~~~~~~~ 852 (929)
++........ .........||+.|+|||++.+.. ++.++||||+|++++++... ..++....
T Consensus 194 ~~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~ 271 (342)
T 1b6c_B 194 AVRHDSATDT--IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 271 (342)
T ss_dssp CEEEETTTTE--EEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred ceeccccccc--cccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccC
Confidence 9876432110 000123457999999999988763 34789999999888776544 22221111
Q ss_pred chhhhccChHHHHhhcc-----cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 853 ENVLQVLDPELRQLMTS-----NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 853 ~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
. .+.....+...... .........++ ...+.+++.+||+.||++|||++||++.|+++.++
T Consensus 272 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 272 P--SDPSVEEMRKVVCEQKLRPNIPNRWQSCEA-LRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp C--SSCCHHHHHHHHTTSCCCCCCCGGGGTSHH-HHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred c--CcccHHHHHHHHHHHHhCCCCcccccchhH-HHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 0 00000111111100 00000011122 23334488899999999999999999999998765
No 135
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.97 E-value=2.9e-33 Score=311.14 Aligned_cols=242 Identities=21% Similarity=0.269 Sum_probs=176.2
Q ss_pred HHHhhCCCCCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHccCCccccceeeeccc
Q 002376 656 LRRATGNFSHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVRHRNLVKLITSCSS 713 (929)
Q Consensus 656 l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~ 713 (929)
+....++|+..+.||+|+||.||+|++.+ ..+.|.+|++++++++||||+++++++..
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 33456789999999999999999987631 13578899999999999999999999965
Q ss_pred CCCCCcceEEEEEEecCCCCccccccccc--------------------------------cccccHHHHHHHhhhCCCC
Q 002376 714 LDSKNMEFLALVYEFLSNGSLGDWIHGER--------------------------------KNELDITSALDYLHNDCEV 761 (929)
Q Consensus 714 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------------------------------~~~~~ia~aL~yLH~~~~~ 761 (929)
.+ ..++||||+++|+|.++++... .++.||+.||+|||+.
T Consensus 122 ~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~--- 193 (343)
T 1luf_A 122 GK-----PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER--- 193 (343)
T ss_dssp SS-----SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred CC-----ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence 33 3799999999999999986421 1367899999999998
Q ss_pred CEEecCCCCCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCc
Q 002376 762 PVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEF 841 (929)
Q Consensus 762 ~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~ 841 (929)
+|+||||||+||++++++.+||+|||+++....... ........||+.|+|||++.+..++.++||||+|++++++
T Consensus 194 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el 269 (343)
T 1luf_A 194 KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY----YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269 (343)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGC----BC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred CeecCCCCcceEEECCCCeEEEeecCCCcccccCcc----ccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHH
Confidence 999999999999999999999999999987632211 1112334689999999999999999999999999877765
Q ss_pred ch-hHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 842 NI-VKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 842 ~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
.. ...++..... . .+......... ...++..+..+.+++.+||+.||++||++.|+++.|+++.+.+.
T Consensus 270 ~t~g~~p~~~~~~--~-----~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 270 FSYGLQPYYGMAH--E-----EVIYYVRDGNI--LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp HTTTCCTTTTSCH--H-----HHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred HhcCCCcCCCCCh--H-----HHHHHHhCCCc--CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 43 3222222111 1 11111100000 00001111223337779999999999999999999999876654
No 136
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.97 E-value=4.2e-33 Score=307.16 Aligned_cols=245 Identities=19% Similarity=0.243 Sum_probs=167.5
Q ss_pred HHhhCCCCCceeecccCceeEEeccccC---------------------cHHHHHHHHHHHHccCCccccceeeecccCC
Q 002376 657 RRATGNFSHENLIGSGSFGSVLHNERTG---------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLD 715 (929)
Q Consensus 657 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~---------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~ 715 (929)
....++|+..+.||+|+||.||+|++.. ..+.|.+|++++++++||||+++++++....
T Consensus 19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 3445689999999999999999987541 2356889999999999999999999987643
Q ss_pred CCC-cceEEEEEEecCCCCccccccccc--------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCc
Q 002376 716 SKN-MEFLALVYEFLSNGSLGDWIHGER--------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMT 780 (929)
Q Consensus 716 ~~~-~~~~~lV~e~~~~gsL~~~l~~~~--------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~ 780 (929)
..+ ....++||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+||++++++.
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSC
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCC
Confidence 211 123489999999999999885321 2367899999999998 9999999999999999999
Q ss_pred eEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhcc
Q 002376 781 AKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVL 859 (929)
Q Consensus 781 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~ 859 (929)
+||+|||+++....... ........+|+.|+|||++.+..++.++||||+|++++++.. ...++..... .+..
T Consensus 176 ~kl~Dfg~a~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~ 249 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDY----YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN--AEIY 249 (323)
T ss_dssp EEECCCCC---------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHH
T ss_pred EEEeecccccccccccc----ccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh--HHHH
Confidence 99999999986532211 111223457889999999999999999999999987777544 3333322221 1111
Q ss_pred ChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 860 DPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 860 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
.. +.... ........++ .+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 250 ~~-~~~~~--~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 250 NY-LIGGN--RLKQPPECME----EVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp HH-HHTTC--CCCCCTTCCH----HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HH-HhcCC--CCCCCCccCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 00 11000 0011111112 2233777999999999999999999999987753
No 137
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.97 E-value=2.5e-33 Score=323.54 Aligned_cols=238 Identities=21% Similarity=0.304 Sum_probs=176.9
Q ss_pred HHhhCCCCCceeecccCceeEEecccc--------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 657 RRATGNFSHENLIGSGSFGSVLHNERT--------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 657 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~--------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
+...++|+..+.||+|+||.||+|.+. ...++|.+|++++++++|||||++++++.. ...
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~------~~~ 257 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EPI 257 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEECS------SSC
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEeC------Ccc
Confidence 344567888999999999999999764 235789999999999999999999999852 237
Q ss_pred EEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
++|||||++|+|.++++... .++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 258 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~ 334 (454)
T 1qcf_A 258 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVI 334 (454)
T ss_dssp EEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGB
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEc
Confidence 99999999999999987431 2367999999999998 9999999999999999999999999999875
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
.... ........+|+.|+|||++.+..++.++||||+|++++++.. ...++..... .++.. .+.......
T Consensus 335 ~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~--~~~~~-~i~~~~~~~- 405 (454)
T 1qcf_A 335 EDNE-----YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIR-ALERGYRMP- 405 (454)
T ss_dssp CCHH-----HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHH-HHHHTCCCC-
T ss_pred CCCc-----eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH--HHHHH-HHHcCCCCC-
Confidence 3211 011122356889999999998999999999999987776544 3333222111 11111 111111000
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
... .+...+ .+++.+||+.||++||||++|+++|+++....
T Consensus 406 -~~~---~~~~~l-~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 406 -RPE---NCPEEL-YNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp -CCT---TSCHHH-HHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred -CCC---CCCHHH-HHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 001 111223 33778999999999999999999999976543
No 138
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.97 E-value=1.1e-32 Score=303.39 Aligned_cols=230 Identities=20% Similarity=0.221 Sum_probs=168.3
Q ss_pred hCCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
.++|+..+.||+|+||+||+|+... ..+.+.+|+.+++.++|||||++++++.+. ...
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-----~~~ 80 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG-----NIQ 80 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECS-----SEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecC-----CeE
Confidence 3689999999999999999986541 135688999999999999999999998543 358
Q ss_pred EEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
|+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 157 (323)
T 3tki_A 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (323)
T ss_dssp EEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence 99999999999999987442 3467999999999998 999999999999999999999999999986532
Q ss_pred ccCCCCCccccceeccccccccccccCCCCC-CCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERP-STAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
.. ........+||+.|+|||++.+..+ +.++||||+|++++++.....++...... .............
T Consensus 158 ~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~~~~~~~~~~- 227 (323)
T 3tki_A 158 NN----RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS-----CQEYSDWKEKKTY- 227 (323)
T ss_dssp TT----EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT-----SHHHHHHHTTCTT-
T ss_pred CC----cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH-----HHHHHHHhccccc-
Confidence 21 1111234579999999999988775 78999999998777665544443222111 1111111111000
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
......+...+.+++.+|++.||++|||++|+++
T Consensus 228 -~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 228 -LNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp -STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -CCccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0001111222233777999999999999999975
No 139
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.97 E-value=4.9e-33 Score=320.99 Aligned_cols=178 Identities=24% Similarity=0.282 Sum_probs=139.8
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCC-CCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS-KNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-~~~~ 720 (929)
.++|+..+.||+|+||+||+|.+.. ..+++.+|+.+++.++|||||++++++..... ....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 5689999999999999999986541 24568899999999999999999999865432 2235
Q ss_pred eEEEEEEecCCCCccccccc------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHG------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
..|+||||+++ ++.+.+.. .+.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+....
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 216 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred eEEEEEeCCCC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence 68999999975 46555542 224578999999999998 999999999999999999999999999986532
Q ss_pred ccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
. ......+||++|+|||++.+..++.++||||+|++++++..+..++
T Consensus 217 ~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF 263 (464)
T 3ttj_A 217 S-------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263 (464)
T ss_dssp C-------CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred C-------cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCC
Confidence 1 1234468999999999999999999999999998888766554443
No 140
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.97 E-value=4.1e-33 Score=305.79 Aligned_cols=249 Identities=20% Similarity=0.265 Sum_probs=170.5
Q ss_pred HHHHHhhCCCCCceeecccCceeEEeccccC---------------------cHHHHHHHHHHHHccCCccccceeeecc
Q 002376 654 DELRRATGNFSHENLIGSGSFGSVLHNERTG---------------------SWKSFIAECETLRNVRHRNLVKLITSCS 712 (929)
Q Consensus 654 ~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~---------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~ 712 (929)
+++....++|...+.||+|+||.||+|+... ..+.+.+|+.++++++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 3344456688889999999999999875431 1356889999999999999999999997
Q ss_pred cCCCCCcceEEEEEEecCCCCcccccccc--------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC
Q 002376 713 SLDSKNMEFLALVYEFLSNGSLGDWIHGE--------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE 778 (929)
Q Consensus 713 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~--------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~ 778 (929)
..+.......++||||+++|+|.+++... ..++.|++.||+|||+. +|+||||||+||+++++
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDD 183 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTT
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCC
Confidence 65543344579999999999999988321 12367899999999998 99999999999999999
Q ss_pred CceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhh
Q 002376 779 MTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQ 857 (929)
Q Consensus 779 ~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~ 857 (929)
+.+||+|||+++....... ........|++.|+|||++.+..++.++||||+|++++++.. ...++..... .+
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~ 257 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDY----YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--HE 257 (313)
T ss_dssp SCEEECSCSCC--------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GG
T ss_pred CcEEEeecCcceecccccc----cCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH--HH
Confidence 9999999999986532211 111233467889999999999999999999999987766544 2222221111 11
Q ss_pred ccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 858 VLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 858 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
..+ .+.... ........++ .+ .+++.+||+.||++|||++|+++.|+++.+..+
T Consensus 258 ~~~-~~~~~~--~~~~~~~~~~---~l-~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 258 MYD-YLLHGH--RLKQPEDCLD---EL-YEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp HHH-HHHTTC--CCCCBTTCCH---HH-HHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred HHH-HHHcCC--CCCCCccccH---HH-HHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 111 111100 0001111112 22 337779999999999999999999999987654
No 141
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.97 E-value=6.1e-33 Score=303.95 Aligned_cols=174 Identities=25% Similarity=0.355 Sum_probs=141.0
Q ss_pred hCCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
.++|+..+.||+|+||.||+|++.. ..+.+.+|++++++++||||+++++++.+. ...
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~~ 94 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSE-----RCL 94 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCS-----SCE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccC-----CEE
Confidence 4689999999999999999987641 135688999999999999999999998543 348
Q ss_pred EEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
++||||++ |+|.+++.... .++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 95 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 95 TLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp EEEEECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred EEEEcCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 99999997 57877765432 2367899999999998 99999999999999999999999999998653
Q ss_pred cccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
.. ........||+.|+|||++.+ ..++.++||||+|++++++.....++
T Consensus 171 ~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf 220 (311)
T 3niz_A 171 IP------VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220 (311)
T ss_dssp SC------CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred CC------cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCC
Confidence 21 112233578999999999876 46899999999998877765554433
No 142
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.97 E-value=1.7e-33 Score=311.99 Aligned_cols=227 Identities=24% Similarity=0.311 Sum_probs=168.1
Q ss_pred HHhhCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHcc-CCccccceeeecccCCC
Q 002376 657 RRATGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDS 716 (929)
Q Consensus 657 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~ 716 (929)
....++|...+.||+|+||+||+|+... ..+.+.+|..++..+ +||||+++++++.+
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~--- 89 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT--- 89 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC---
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe---
Confidence 4456789999999999999999997652 234577899999887 99999999999854
Q ss_pred CCcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccc
Q 002376 717 KNMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788 (929)
Q Consensus 717 ~~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGl 788 (929)
....|+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 90 --~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~ 164 (345)
T 1xjd_A 90 --KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGM 164 (345)
T ss_dssp --SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred --CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChh
Confidence 335899999999999999986422 3467999999999998 999999999999999999999999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhc
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMT 868 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 868 (929)
|+..... .......+||+.|+|||++.+..++.++||||+|+++|++..+..++.... ..++.. .+..
T Consensus 165 a~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--~~~~~~-~i~~--- 232 (345)
T 1xjd_A 165 CKENMLG------DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD--EEELFH-SIRM--- 232 (345)
T ss_dssp CBCCCCT------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHH-HHHH---
T ss_pred hhhcccC------CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC--HHHHHH-HHHh---
Confidence 9854211 112345689999999999999999999999999987777655443332211 111111 1111
Q ss_pred ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHH-HHH
Q 002376 869 SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIR-EAL 907 (929)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~-ev~ 907 (929)
...... ..+...+++++.+|++.||++||++. |+.
T Consensus 233 ~~~~~p----~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 233 DNPFYP----RWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CCCCCC----TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CCCCCC----cccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 111111 11222333477799999999999997 654
No 143
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.97 E-value=2.7e-33 Score=314.32 Aligned_cols=230 Identities=23% Similarity=0.218 Sum_probs=163.4
Q ss_pred CceeecccCceeEEecccc----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEEe
Q 002376 665 HENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYEF 728 (929)
Q Consensus 665 ~~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e~ 728 (929)
..+.||+|+||.||+|+.. ...+.|.+|++++++++|||||++++++... ...++||||
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-----~~~~lv~E~ 167 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESK-----NDIVLVMEY 167 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----SEEEEEEEC
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEEC-----CEEEEEEeC
Confidence 3578999999999998754 1346789999999999999999999999543 348999999
Q ss_pred cCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeee--cCCCceEEeccccccccccccC
Q 002376 729 LSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILL--DEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 729 ~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl--~~~~~~ki~DfGla~~~~~~~~ 797 (929)
+++|+|.+++.... .++.||+.||+|||+. +|+||||||+|||+ ++++.+||+|||+++.....
T Consensus 168 ~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~-- 242 (373)
T 2x4f_A 168 VDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR-- 242 (373)
T ss_dssp CTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT--
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc--
Confidence 99999998875322 2357999999999998 99999999999999 67789999999999876322
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQL 877 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 877 (929)
......+||+.|+|||++.+..++.++||||+|++++++.....++..... .+.+...... ........
T Consensus 243 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--~~~~~~i~~~----~~~~~~~~ 311 (373)
T 2x4f_A 243 -----EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND--AETLNNILAC----RWDLEDEE 311 (373)
T ss_dssp -----CBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHT----CCCSCSGG
T ss_pred -----cccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhc----cCCCChhh
Confidence 112234799999999999999999999999999877776554443322221 1111111111 00000001
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHHhhHH
Q 002376 878 HDCLITIIGSVGLSCTTESPGGRIGIREALR--RLKSSQE 915 (929)
Q Consensus 878 ~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~--~L~~~~~ 915 (929)
...+...+.+++.+|++.||++|||++|+++ .+++...
T Consensus 312 ~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~~~ 351 (373)
T 2x4f_A 312 FQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKL 351 (373)
T ss_dssp GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCHHH
T ss_pred hccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCCch
Confidence 1112223334777999999999999999986 5666543
No 144
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.97 E-value=4.3e-33 Score=309.23 Aligned_cols=226 Identities=25% Similarity=0.278 Sum_probs=165.1
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~ 720 (929)
++|+..+.||+|+||+||+++... ..+.+.+|+.+++++ +|||||++++++.+ ..
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~-----~~ 83 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-----ES 83 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----SS
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-----CC
Confidence 578889999999999999987641 134577899999988 89999999999854 34
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
..|+||||+++|+|.+++...+ .++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 84 ~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 84 RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 5899999999999999886432 3467899999999998 9999999999999999999999999999853
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCch--hhhccChHHHHhhccc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPEN--VLQVLDPELRQLMTSN 870 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~ 870 (929)
... .......+||+.|+|||++.+..++.++||||+|+++|++.....++...... ........+.......
T Consensus 161 ~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~ 234 (345)
T 3a8x_A 161 LRP------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 234 (345)
T ss_dssp CCT------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC
T ss_pred cCC------CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC
Confidence 211 11234468999999999999999999999999998888776655444321110 0000001111111000
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCH
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGI 903 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 903 (929)
. ...+..+...+++++.+||+.||++||++
T Consensus 235 ~---~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 235 Q---IRIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp C---CCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred C---CCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 0 01111122233347779999999999996
No 145
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.97 E-value=1.5e-33 Score=309.10 Aligned_cols=239 Identities=18% Similarity=0.258 Sum_probs=175.9
Q ss_pred hhCCCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHcc-CCccccceeeecccCC
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSLD 715 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~ 715 (929)
..++|+..+.||+|+||.||+|++. ...+.+.+|+++++++ +||||+++++++...+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 3467889999999999999998631 1246788999999999 9999999999996543
Q ss_pred CCCcceEEEEEEecCCCCccccccccc--------------------------cccccHHHHHHHhhhCCCCCEEecCCC
Q 002376 716 SKNMEFLALVYEFLSNGSLGDWIHGER--------------------------KNELDITSALDYLHNDCEVPVVHSDLK 769 (929)
Q Consensus 716 ~~~~~~~~lV~e~~~~gsL~~~l~~~~--------------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk 769 (929)
..++||||+++|+|.+++...+ .++.|++.||+|||+. +|+|||||
T Consensus 101 -----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlk 172 (313)
T 1t46_A 101 -----PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA 172 (313)
T ss_dssp -----SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred -----CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCc
Confidence 3799999999999999986432 1256899999999998 99999999
Q ss_pred CCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhh
Q 002376 770 PGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVE 848 (929)
Q Consensus 770 ~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~ 848 (929)
|+||+++.++.+||+|||+++...... .........||+.|+|||++.+..++.++||||+|++++++.. ...++
T Consensus 173 p~Nil~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~ 248 (313)
T 1t46_A 173 ARNILLTHGRITKICDFGLARDIKNDS----NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 248 (313)
T ss_dssp GGGEEEETTTEEEECCCGGGSCTTSCT----TSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred cceEEEcCCCCEEEccccccccccccc----cceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999998664321 1111233467889999999999999999999999987776543 33222
Q ss_pred hcCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 849 SNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 849 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
...+. +............. ......+..+.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 249 ~~~~~------~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 249 PGMPV------DSKFYKMIKEGFRM--LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp TTCCS------SHHHHHHHHHTCCC--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred Ccccc------hhHHHHHhccCCCC--CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 22111 11111111100000 000111122333777999999999999999999999987754
No 146
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.97 E-value=7.2e-33 Score=308.34 Aligned_cols=230 Identities=23% Similarity=0.257 Sum_probs=156.4
Q ss_pred hhCCCCCceeecccCceeEEeccccC--------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG--------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~--------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
..++|+..+.||+|+||.||+|+... ..+.+.+|++++++++||||+++++++... ...++
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~l 125 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETP-----TEISL 125 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECS-----SEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecC-----CeEEE
Confidence 35679999999999999999988752 245688999999999999999999999543 34899
Q ss_pred EEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC---CCceEEeccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE---EMTAKVGDFGLARFLL 793 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~---~~~~ki~DfGla~~~~ 793 (929)
||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++...
T Consensus 126 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~ 202 (349)
T 2w4o_A 126 VLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE 202 (349)
T ss_dssp EECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred EEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence 999999999999886433 3367899999999998 9999999999999975 8899999999998653
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
.. .......||+.|+|||++.+..++.++||||+|++++++.....++...... +. ............
T Consensus 203 ~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~---~~~~i~~~~~~~ 270 (349)
T 2w4o_A 203 HQ-------VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD--QF---MFRRILNCEYYF 270 (349)
T ss_dssp -----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH--HH---HHHHHHTTCCCC
T ss_pred cc-------cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc--HH---HHHHHHhCCCcc
Confidence 21 1123457999999999999999999999999998777765544333221110 00 011111111000
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.......+...+++++.+|++.||++|||+.|+++
T Consensus 271 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 271 ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00011112222334777999999999999999875
No 147
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.97 E-value=7.9e-33 Score=320.21 Aligned_cols=180 Identities=24% Similarity=0.330 Sum_probs=135.2
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.++|+..+.||+|+||+||+|++.. ..+++.+|++++++++|||||++++++...+......
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 4689999999999999999986541 2457889999999999999999999997655444566
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.|+||||+ +|+|.++++... .++.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+...
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred EEEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 89999998 578988876432 3467999999999998 99999999999999999999999999998764
Q ss_pred cccCCCCC---------------------ccccceecccccccccccc-CCCCCCCCCCCCCCcCCCCCcch
Q 002376 794 ERVDNQSS---------------------ISSTHVFMGSIGYVPPEYG-LGERPSTAGDVPTSESFAGEFNI 843 (929)
Q Consensus 794 ~~~~~~~~---------------------~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DV~s~g~~~~~~~~ 843 (929)
........ .......+||++|||||++ .+..++.++||||+||+++++..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 22111000 0123456899999999976 45679999999999998888654
No 148
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.97 E-value=1e-33 Score=310.23 Aligned_cols=242 Identities=20% Similarity=0.304 Sum_probs=165.1
Q ss_pred hCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.++|+..+.||+|+||.||++++.. ..+.|.+|++++++++||||+++++++..... ...
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~-~~~ 89 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP-AGP 89 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEET-TEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCC-CCc
Confidence 4689999999999999999987531 12468899999999999999999999865432 223
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
..|+||||+++|+|.++++... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred ccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 4699999999999999986432 3467899999999998 9999999999999999999999999999876
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
..... .........||+.|+|||++.+..++.++||||+|+++|++.....++..... .+........ ...
T Consensus 167 ~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~--~~~~~~~~~~----~~~ 237 (311)
T 3ork_A 167 ADSGN---SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP--VSVAYQHVRE----DPI 237 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHC----CCC
T ss_pred ccccc---ccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHhcC----CCC
Confidence 43211 11222345799999999999999999999999999877776554433322211 1111111111 111
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHH-HHHHhhH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREAL-RRLKSSQ 914 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~-~~L~~~~ 914 (929)
........++.-+.+++.+||+.||++||++.+++ ..+.++.
T Consensus 238 ~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 238 PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp CHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred CcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 10000111222233477799999999999766554 4555543
No 149
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.97 E-value=7.1e-33 Score=322.82 Aligned_cols=233 Identities=20% Similarity=0.300 Sum_probs=173.8
Q ss_pred hCCCCCceeecccCceeEEecccc---------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT---------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~---------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
.++|+..+.||+|+||.||+|++. ...++|.+|++++++++|||||+++++|...+ ..++
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~~~l 293 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-----PFYI 293 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----SCEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCC-----cEEE
Confidence 456888899999999999998765 23578999999999999999999999996543 3799
Q ss_pred EEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
|||||++|+|.++++... .++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 294 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 294 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred EEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence 999999999999986422 2357999999999998 999999999999999999999999999987532
Q ss_pred ccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
. .........+++.|+|||++.+..++.++||||+|++++++.. ...++.... ..+ +...+....
T Consensus 371 ~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~--~~~-----~~~~~~~~~-- 436 (495)
T 1opk_A 371 D-----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQ-----VYELLEKDY-- 436 (495)
T ss_dssp C-----CEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGG-----HHHHHHTTC--
T ss_pred C-----ceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC--HHH-----HHHHHHcCC--
Confidence 1 1111223356789999999998899999999999987777543 222222111 111 111111110
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQ 914 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~ 914 (929)
+...+...+..+.+++.+||+.||++||||+|++++|+++.
T Consensus 437 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 437 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 00011111222333778999999999999999999999864
No 150
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.97 E-value=1.1e-33 Score=320.40 Aligned_cols=237 Identities=21% Similarity=0.191 Sum_probs=173.3
Q ss_pred CChHHHHHhhCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeec
Q 002376 651 ISYDELRRATGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSC 711 (929)
Q Consensus 651 ~~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~ 711 (929)
+.+++++...++|+..+.||+|+||+||+++... ..+.+.+|+.++..++|||||++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 3456666778899999999999999999988651 123477899999999999999999998
Q ss_pred ccCCCCCcceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceE
Q 002376 712 SSLDSKNMEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAK 782 (929)
Q Consensus 712 ~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 782 (929)
.+ ....|+||||+++|+|.++++... .++.||+.||+|||+. +|+||||||+|||++.++.+|
T Consensus 131 ~~-----~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vk 202 (412)
T 2vd5_A 131 QD-----ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIR 202 (412)
T ss_dssp EC-----SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEE
T ss_pred ee-----CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEE
Confidence 54 345899999999999999986422 2367899999999998 999999999999999999999
Q ss_pred EeccccccccccccCCCCCccccceeccccccccccccC-------CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-h
Q 002376 783 VGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGL-------GERPSTAGDVPTSESFAGEFNIVKWVESNLPE-N 854 (929)
Q Consensus 783 i~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~ 854 (929)
|+|||+|+..... ........+||+.|||||++. +..++.++||||+|+++|++..+..++..... .
T Consensus 203 L~DFGla~~~~~~-----~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~ 277 (412)
T 2vd5_A 203 LADFGSCLKLRAD-----GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE 277 (412)
T ss_dssp ECCCTTCEECCTT-----SCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred EeechhheeccCC-----CccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH
Confidence 9999999865321 111123458999999999987 45789999999999888776655544432221 1
Q ss_pred -hhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCC---CCHHHHHH
Q 002376 855 -VLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGR---IGIREALR 908 (929)
Q Consensus 855 -~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~R---Ps~~ev~~ 908 (929)
..+++........ +. ....++.-+++++.+|+. +|++| |+++|+.+
T Consensus 278 ~~~~i~~~~~~~~~---p~----~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 278 TYGKIVHYKEHLSL---PL----VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHHHHTHHHHCCC---C--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HHHHHHhcccCcCC---Cc----cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 1111111100000 00 001122233447779999 99998 58888864
No 151
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.97 E-value=6.1e-33 Score=308.47 Aligned_cols=222 Identities=21% Similarity=0.219 Sum_probs=168.1
Q ss_pred hCCCCCceeecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.++|+..+.||+|+||.||+++.. ...+.+.+|++++++++||||+++++++.+ ..
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~ 114 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD-----NS 114 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SS
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-----CC
Confidence 357889999999999999998764 123567889999999999999999999854 33
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
..|+||||+++|+|.+++.... .++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 115 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~ 191 (350)
T 1rdq_E 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191 (350)
T ss_dssp EEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceec
Confidence 5899999999999999987432 3467999999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
.. .....+||+.|+|||++.+..++.++||||+|+++|++.....++.... ..++....... ...
T Consensus 192 ~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--~~~~~~~i~~~----~~~ 256 (350)
T 1rdq_E 192 KG---------RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ--PIQIYEKIVSG----KVR 256 (350)
T ss_dssp SS---------CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHC----CCC
T ss_pred cC---------CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC--HHHHHHHHHcC----CCC
Confidence 32 1234579999999999999999999999999987777655433332111 11111111111 111
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCC-----HHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIG-----IREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~ev~~ 908 (929)
.... +..-+++++.+|++.||++||+ ++|+.+
T Consensus 257 ~p~~----~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 257 FPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CCTT----CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CCCC----CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 1111 1222334777999999999998 777764
No 152
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.97 E-value=8.1e-33 Score=296.68 Aligned_cols=233 Identities=24% Similarity=0.316 Sum_probs=165.0
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.++|+..+.||+|+||.||+|++.+ ..+.+.+|+++++.++||||+++++++... ..
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 80 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKE-----PN 80 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-------
T ss_pred hhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC-----Cc
Confidence 3578889999999999999987541 135788999999999999999999999643 34
Q ss_pred EEEEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC--------CCceEEecc
Q 002376 722 LALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE--------EMTAKVGDF 786 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~--------~~~~ki~Df 786 (929)
.++||||+++|+|.++++..+ .++.|++.||+|||+....+|+||||||+||+++. ++.+||+||
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 81 LCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp CEEEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred eEEEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 799999999999999886432 33678999999999982223999999999999986 678999999
Q ss_pred ccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHh
Q 002376 787 GLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQL 866 (929)
Q Consensus 787 Gla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 866 (929)
|+++..... ......||+.|+|||++.+..++.++||||+|++++++.....++...... +.. ......
T Consensus 161 g~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~-~~~~~~ 229 (271)
T 3dtc_A 161 GLAREWHRT--------TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL--AVA-YGVAMN 229 (271)
T ss_dssp CC---------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH--HHH-HHHHTS
T ss_pred Ccccccccc--------cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHH-HhhhcC
Confidence 999865321 112347899999999999999999999999998777665544443322210 000 000000
Q ss_pred hcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 867 MTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
......... .++.+.+++.+||+.||++|||++|+++.|+++
T Consensus 230 -~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 230 -KLALPIPST----CPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -CCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -CCCCCCCcc----cCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 000000111 112233377799999999999999999999864
No 153
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=2.4e-32 Score=297.39 Aligned_cols=240 Identities=24% Similarity=0.313 Sum_probs=174.5
Q ss_pred CCCCceeecccCceeEEecccc--------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 662 NFSHENLIGSGSFGSVLHNERT--------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~--------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.|+..++||+|+||.||+|++. ...+.|.+|+.++++++||||+++++++.+.+. .
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----~ 97 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG----L 97 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS----C
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC----C
Confidence 4555689999999999998642 123678899999999999999999999865332 3
Q ss_pred EEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.++||||+.+|+|.++++... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 98 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp CEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred cEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 589999999999999987422 2356899999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhccc--
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSN-- 870 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 870 (929)
...... .........||+.|+|||.+.+..++.++||||+|++++++.....+ +..... ...+.......
T Consensus 175 ~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~----~~~~~~--~~~~~~~~~~~~~ 246 (298)
T 3pls_A 175 LDREYY--SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP----PYRHID--PFDLTHFLAQGRR 246 (298)
T ss_dssp TTGGGG--CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCC----TTTTSC--GGGHHHHHHTTCC
T ss_pred cCCccc--ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCC----CCccCC--HHHHHHHhhcCCC
Confidence 332111 11122344689999999999999999999999999776665432211 111000 00111111100
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhhc
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLKQ 920 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~ 920 (929)
.......++ .+.+++.+||+.||++|||++|++++|+++.+.+...
T Consensus 247 ~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 247 LPQPEYCPD----SLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp CCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred CCCCccchH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 001111112 2333777999999999999999999999998886544
No 154
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.97 E-value=3.4e-33 Score=316.31 Aligned_cols=182 Identities=17% Similarity=0.144 Sum_probs=146.8
Q ss_pred hCCCCCceeeccc--CceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 660 TGNFSHENLIGSG--SFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 660 ~~~~~~~~~iG~G--~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
.++|+..+.||+| +||.||+|+... ..+.+.+|+.++++++|||||++++++.+.
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----- 98 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD----- 98 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEEC-----
Confidence 4679999999999 999999988651 135677899999999999999999999643
Q ss_pred ceEEEEEEecCCCCcccccccc----------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGE----------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~----------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
...++|||||++|+|.+++... ..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||.+
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~ 175 (389)
T 3gni_B 99 NELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSN 175 (389)
T ss_dssp TEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGC
T ss_pred CEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccc
Confidence 3489999999999999998643 13367899999999998 9999999999999999999999999998
Q ss_pred cccccccCC-CCCccccceeccccccccccccCC--CCCCCCCCCCCCcCCCCCcchhHHhhh
Q 002376 790 RFLLERVDN-QSSISSTHVFMGSIGYVPPEYGLG--ERPSTAGDVPTSESFAGEFNIVKWVES 849 (929)
Q Consensus 790 ~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~s~g~~~~~~~~~~~~~~ 849 (929)
......... ..........+||+.|+|||++.+ ..++.++||||+|++++++.....++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 238 (389)
T 3gni_B 176 LSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 238 (389)
T ss_dssp EECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred eeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence 755322111 111112233479999999999988 579999999999988888766555543
No 155
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.97 E-value=1.1e-33 Score=308.52 Aligned_cols=243 Identities=21% Similarity=0.271 Sum_probs=172.8
Q ss_pred CCCCCceeecccCceeEEeccc----c-----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 661 GNFSHENLIGSGSFGSVLHNER----T-----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~----~-----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
+.|+..+.||+|+||.||+|++ . ...+.+.+|++++++++||||+++++++...+ .
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~ 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG---G 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC---C
Confidence 3578889999999999999872 1 12367899999999999999999999987532 2
Q ss_pred ceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
...++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred ceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccc
Confidence 34799999999999999985322 3367899999999998 99999999999999999999999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhc--------cChH
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQV--------LDPE 862 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 862 (929)
....... .........||..|+|||++.+..++.++||||+|++++++..+..++.......... ....
T Consensus 175 ~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 251 (302)
T 4e5w_A 175 AIETDKE---YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR 251 (302)
T ss_dssp ECCTTCC---EEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHH
T ss_pred cccCCCc---ceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHH
Confidence 7642211 1112233468889999999999999999999999988777654332211000000000 0001
Q ss_pred HHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhH
Q 002376 863 LRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQ 914 (929)
Q Consensus 863 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~ 914 (929)
+........ ....+..++..+.+++.+||+.||++|||++|++++|+++.
T Consensus 252 ~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 252 LVNTLKEGK--RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHHTTC--CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhccC--CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 111110000 00000111222334777999999999999999999999874
No 156
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.97 E-value=2.4e-33 Score=309.06 Aligned_cols=228 Identities=20% Similarity=0.167 Sum_probs=147.1
Q ss_pred ceeecccCceeEEeccccC-------------cHHHHHHHHHHHHccC-CccccceeeecccCCCCCcceEEEEEEecCC
Q 002376 666 ENLIGSGSFGSVLHNERTG-------------SWKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNMEFLALVYEFLSN 731 (929)
Q Consensus 666 ~~~iG~G~~g~Vy~~~~~~-------------~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~~ 731 (929)
.+.||+|+||.||+|.+.. ....+.+|+.+++.+. ||||+++++++.+ ....|+||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-----~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHD-----QLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----SSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEc-----CCEEEEEEEccCC
Confidence 4789999999999987652 2467889999999997 9999999999854 3458999999999
Q ss_pred CCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC---ceEEeccccccccccccCCCC
Q 002376 732 GSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM---TAKVGDFGLARFLLERVDNQS 800 (929)
Q Consensus 732 gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~---~~ki~DfGla~~~~~~~~~~~ 800 (929)
|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++.....
T Consensus 91 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~----- 162 (325)
T 3kn6_A 91 GELFERIKKKKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD----- 162 (325)
T ss_dssp CBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCC-----
Confidence 99999987433 3467899999999998 999999999999997665 8999999999865321
Q ss_pred CccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHH-hhcccchhhhhhhH
Q 002376 801 SISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQ-LMTSNESQTIQLHD 879 (929)
Q Consensus 801 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~ 879 (929)
.......+||+.|+|||++.+..++.++||||+|++++++.....++..............+.. ............+.
T Consensus 163 -~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (325)
T 3kn6_A 163 -NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWK 241 (325)
T ss_dssp ----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHH
T ss_pred -CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCccccc
Confidence 1122345789999999999999999999999999877776554444432211000000011111 11111111111111
Q ss_pred HHHHHHHHHhccccCCCCCCCCCHHHHH
Q 002376 880 CLITIIGSVGLSCTTESPGGRIGIREAL 907 (929)
Q Consensus 880 ~~~~~~~~l~~~Cl~~dP~~RPs~~ev~ 907 (929)
.++..+++++.+|++.||++|||++|++
T Consensus 242 ~~s~~~~~li~~~L~~dP~~Rpt~~ell 269 (325)
T 3kn6_A 242 NVSQEAKDLIQGLLTVDPNKRLKMSGLR 269 (325)
T ss_dssp TSCHHHHHHHHHHHCCCTTTCCCTTTST
T ss_pred CCCHHHHHHHHHHCCCChhHCCCHHHHh
Confidence 1223334477799999999999999886
No 157
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.97 E-value=2.3e-33 Score=318.18 Aligned_cols=243 Identities=18% Similarity=0.203 Sum_probs=179.1
Q ss_pred CCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
++|...++||+|+||.||+|++.. ..+.+.+|++++++++||||+++++++...+ ....+
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~---~~~~~ 85 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT---TRHKV 85 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT---TCCEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCC---CCeeE
Confidence 468889999999999999987651 2467889999999999999999999986533 23579
Q ss_pred EEEEecCCCCccccccccc-----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeee----cCCCceEEecccc
Q 002376 724 LVYEFLSNGSLGDWIHGER-----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILL----DEEMTAKVGDFGL 788 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~-----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl----~~~~~~ki~DfGl 788 (929)
+||||+++|+|.++++... .++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 9999999999999987432 2357899999999998 99999999999999 7788899999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCC--------CCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhc
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG--------ERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQV 858 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~ 858 (929)
++..... .......||+.|+|||++.+ ..++.++||||+|+++|++.....++..... ...++
T Consensus 163 a~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~ 235 (396)
T 4eut_A 163 ARELEDD-------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235 (396)
T ss_dssp CEECCCG-------GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHH
T ss_pred ceEccCC-------CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHH
Confidence 9876322 11233579999999999865 5678899999999888776665554432221 11111
Q ss_pred cChHHHHhhcc-----------------cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 859 LDPELRQLMTS-----------------NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 859 ~~~~l~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
+...+.+.... .........+.+...+.+++.+||+.||++||+++|+++.++++...
T Consensus 236 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 236 MYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp HHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred HHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 11111110000 00001112234555666688899999999999999999999887653
No 158
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.97 E-value=1.5e-33 Score=302.21 Aligned_cols=232 Identities=18% Similarity=0.245 Sum_probs=171.3
Q ss_pred CCCCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
++|+..+.||+|+||.||+|++.+ ..+.|.+|+.++++++||||+++++++.+.+ ....++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~~~l 86 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP---APHPTL 86 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTT---SSSCEE
T ss_pred HHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCC---CCCeEe
Confidence 578889999999999999997652 2357899999999999999999999986532 234799
Q ss_pred EEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
||||+++|+|.++++... .++.|++.||+|||+. .++|+||||||+||++++++.+||+|||++....
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~- 164 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ- 164 (271)
T ss_dssp EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-
T ss_pred eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeeec-
Confidence 999999999999997543 2357899999999997 1229999999999999999999999999876421
Q ss_pred ccCCCCCccccceeccccccccccccCCCCCCC---CCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERPST---AGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
.....||+.|+|||++.+..++. ++||||+|++++++.....++..... .+.......... ..
T Consensus 165 ----------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~--~~ 230 (271)
T 3kmu_A 165 ----------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN--MEIGMKVALEGL--RP 230 (271)
T ss_dssp ----------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH--HHHHHHHHHSCC--CC
T ss_pred ----------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh--HHHHHHHHhcCC--CC
Confidence 12246899999999998776554 79999999877776554444332221 111001111100 00
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQE 915 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~ 915 (929)
... ..++..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 231 ~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 231 TIP----PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 011 1112223347779999999999999999999998753
No 159
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.97 E-value=8.8e-33 Score=307.16 Aligned_cols=226 Identities=22% Similarity=0.266 Sum_probs=167.9
Q ss_pred hhCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCC
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~ 718 (929)
..++|+..+.||+|+||+||+|+... ..+.+.+|..++..+ +||+|+++++++.+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~----- 92 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT----- 92 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC-----
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc-----
Confidence 35689999999999999999987652 234577899999988 89999999999854
Q ss_pred cceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
....|+||||+++|+|.+++.... .++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+
T Consensus 93 ~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~ 169 (353)
T 2i0e_A 93 MDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 169 (353)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccc
Confidence 345899999999999999987432 3467999999999998 99999999999999999999999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhccc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
..... .......+||+.|||||++.+..++.++||||+|+++|++..+..++.... ..++...... ..
T Consensus 170 ~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--~~~~~~~i~~----~~ 237 (353)
T 2i0e_A 170 ENIWD------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--EDELFQSIME----HN 237 (353)
T ss_dssp CCCCT------TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHH----CC
T ss_pred ccccC------CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC--HHHHHHHHHh----CC
Confidence 53211 112345689999999999999999999999999987777655443332211 1111111111 11
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCC-----HHHHHH
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIG-----IREALR 908 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~ev~~ 908 (929)
.... ..+...+++++.+|++.||++||+ ++|+.+
T Consensus 238 ~~~p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 238 VAYP----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp CCCC----TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred CCCC----CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 1111 112223334777999999999996 456553
No 160
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.97 E-value=3e-32 Score=305.58 Aligned_cols=225 Identities=23% Similarity=0.270 Sum_probs=166.9
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||+|+||.||+++... ..+.+.+|+++++.++|||||++++++.+. ..
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~-----~~ 89 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDE-----ED 89 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----SE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-----CE
Confidence 578899999999999999987642 235688999999999999999999998543 34
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.|+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 90 MFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp EEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 899999999999999987532 3467999999999998 99999999999999999999999999998653
Q ss_pred cccCCCCCccccceeccccccccccccCC---CCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhcc
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLG---ERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMTS 869 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~ 869 (929)
.. ......+||+.|||||++.+ ..++.++||||+|+++|++..+..++..... ...+.+ ......
T Consensus 167 ~~-------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~----~~~~~~ 235 (384)
T 4fr4_A 167 RE-------TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV----HTFETT 235 (384)
T ss_dssp TT-------CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHH----HHHHHC
T ss_pred CC-------CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHH----HHHhhc
Confidence 21 12344689999999999874 4589999999999877776554444322111 111111 111001
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCC-HHHHHH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIG-IREALR 908 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-~~ev~~ 908 (929)
....... +...+.+++.+||+.||++||+ ++++.+
T Consensus 236 ~~~~p~~----~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 236 VVTYPSA----WSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CCCCCTT----SCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ccCCCCc----CCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 1111111 1222333777999999999998 666653
No 161
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.97 E-value=4.7e-33 Score=320.85 Aligned_cols=240 Identities=24% Similarity=0.320 Sum_probs=172.9
Q ss_pred hhCCCCCceeecccCceeEEeccccC--------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG--------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~--------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
..++|+..+.||+|+||.||+|.+.. ..++|.+|++++++++||||+++++++.. ...++
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------~~~~i 255 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIYI 255 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSCEE
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC------CceEE
Confidence 34578888999999999999987652 34689999999999999999999999854 23699
Q ss_pred EEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
||||+++|+|.++++... .++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 256 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 256 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp EECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred EehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 999999999999987321 2367899999999998 999999999999999999999999999987532
Q ss_pred ccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
.. ........+|+.|+|||++.+..++.++||||+|++++++.. ...++..... .+ +........
T Consensus 333 ~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--~~-----~~~~i~~~~-- 398 (452)
T 1fmk_A 333 NE-----YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--RE-----VLDQVERGY-- 398 (452)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HH-----HHHHHHTTC--
T ss_pred Cc-----eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--HH-----HHHHHHcCC--
Confidence 11 111223457889999999999999999999999987776544 2322221111 11 111111100
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhhcc
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLKQQ 921 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~ 921 (929)
+...+...++.+.+++.+||+.||++|||++++++.|+++.....++.
T Consensus 399 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~~ 446 (452)
T 1fmk_A 399 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQY 446 (452)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCC
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCccc
Confidence 000011112223347779999999999999999999999865544333
No 162
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.97 E-value=6.1e-33 Score=300.47 Aligned_cols=241 Identities=20% Similarity=0.260 Sum_probs=178.5
Q ss_pred HHHhhCCCCCceeecccCceeEEecccc---------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 656 LRRATGNFSHENLIGSGSFGSVLHNERT---------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 656 l~~~~~~~~~~~~iG~G~~g~Vy~~~~~---------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
++...++|+..+.||+|+||.||+|.+. ...+.+.+|++++++++||||+++++++... .
T Consensus 8 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~ 82 (288)
T 3kfa_A 8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-----P 82 (288)
T ss_dssp TBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----S
T ss_pred ccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC-----C
Confidence 3345678899999999999999998765 2346799999999999999999999998543 3
Q ss_pred eEEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
..++||||+++|+|.++++... .++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 83 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~ 159 (288)
T 3kfa_A 83 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR 159 (288)
T ss_dssp SEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGG
T ss_pred CEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccce
Confidence 3899999999999999986422 2356899999999998 99999999999999999999999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTS 869 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~ 869 (929)
..... .........||+.|+|||++.+..++.++||||+|++++++.. ...++..... .+. ...+......
T Consensus 160 ~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~--~~~-~~~~~~~~~~ 231 (288)
T 3kfa_A 160 LMTGD-----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQV-YELLEKDYRM 231 (288)
T ss_dssp TSCSS-----SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGH-HHHHHTTCCC
T ss_pred eccCC-----ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHH-HHHHhccCCC
Confidence 65321 1122233467889999999999999999999999977666543 2222211111 110 0111111000
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
. .... .+..+.+++.+|++.||++|||++|++++|+++.+...
T Consensus 232 ~--~~~~----~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~ 274 (288)
T 3kfa_A 232 E--RPEG----CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274 (288)
T ss_dssp C--CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred C--CCCC----CCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 0 0111 11223337779999999999999999999999887644
No 163
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.97 E-value=7.4e-33 Score=300.98 Aligned_cols=249 Identities=18% Similarity=0.189 Sum_probs=177.6
Q ss_pred hhCCCCCceeecccCceeEEeccccC--------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG--------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~--------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
..++|+..+.||+|+||.||+|++.. ..+++.+|+++++.++|++++..++++... ....++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~----~~~~~l 82 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAE----GDYNVM 82 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEE----TTEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCC----CCceEE
Confidence 45789999999999999999998541 234688999999999999988888877542 345799
Q ss_pred EEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeee---cCCCceEEecccccccc
Q 002376 725 VYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILL---DEEMTAKVGDFGLARFL 792 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl---~~~~~~ki~DfGla~~~ 792 (929)
||||+ +|+|.+++.... .++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||+++..
T Consensus 83 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~ 158 (296)
T 4hgt_A 83 VMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp EEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence 99999 999999986321 3367899999999998 99999999999999 78899999999999876
Q ss_pred ccccCCCC-CccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhccc
Q 002376 793 LERVDNQS-SISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMTSN 870 (929)
Q Consensus 793 ~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~ 870 (929)
........ .........||+.|+|||++.+..++.++||||+|++++++.....++..... ...+.+...........
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (296)
T 4hgt_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 238 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch
Confidence 43221110 11122346799999999999999999999999999887776665555543322 11111111111100000
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
. . .....++.-+.+++.+||+.||++|||++|+++.|+++.+...
T Consensus 239 ~--~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 239 I--E-VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp H--H-HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred h--h-hhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 0 0 0000111223337779999999999999999999999988765
No 164
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.97 E-value=3.7e-33 Score=306.59 Aligned_cols=174 Identities=24% Similarity=0.399 Sum_probs=128.3
Q ss_pred hCCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
.++|+..+.||+|+||.||+|+... ..+.+.+|++++++++|||||++++++.. ....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~~ 78 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHT-----ENKL 78 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECC-----TTEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEE-----CCeE
Confidence 4578899999999999999986641 23578899999999999999999999854 3358
Q ss_pred EEEEEecCCCCccccccccc--------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER--------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~--------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGl 788 (929)
++||||++ |+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 154 (317)
T 2pmi_A 79 TLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGL 154 (317)
T ss_dssp EEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSS
T ss_pred EEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCcc
Confidence 99999998 69988875321 2246899999999998 999999999999999999999999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
++..... ........||+.|+|||++.+. .++.++||||+|++++++.....++
T Consensus 155 ~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf 209 (317)
T 2pmi_A 155 ARAFGIP------VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLF 209 (317)
T ss_dssp CEETTSC------CCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred ceecCCC------cccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 9865321 1112334789999999999764 6899999999998877765554433
No 165
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.97 E-value=6.9e-33 Score=300.81 Aligned_cols=169 Identities=25% Similarity=0.411 Sum_probs=137.5
Q ss_pred CCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
++|+..+.||+|+||+||+|++.. ..+.+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 76 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD-----KKL 76 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-----TEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeC-----CEE
Confidence 578899999999999999987641 236788999999999999999999998543 358
Q ss_pred EEEEEecCCCCccccccc---------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHG---------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~---------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
++||||+++ ++.+++.. .+.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 77 ~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 152 (292)
T 3o0g_A 77 TLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFG 152 (292)
T ss_dssp EEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecC
Confidence 999999975 55554432 123467999999999998 99999999999999999999999999998653
Q ss_pred cccCCCCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCcchh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEFNIV 844 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~~~~ 844 (929)
.. ........||+.|+|||++.+.. ++.++||||+|++++++...
T Consensus 153 ~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~ 198 (292)
T 3o0g_A 153 IP------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANA 198 (292)
T ss_dssp SC------CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTT
T ss_pred Cc------cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHc
Confidence 21 11223457899999999998776 89999999999877765433
No 166
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=2.1e-32 Score=302.82 Aligned_cols=237 Identities=21% Similarity=0.277 Sum_probs=168.7
Q ss_pred CCCCCceeecccCceeEEeccccC---------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG---------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~---------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
++|+..+.||+|+||.||+|+... ..+.|.+|++++++++||||+++++++...
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 118 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY----- 118 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS-----
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecC-----
Confidence 456678999999999999986431 234688999999999999999999998543
Q ss_pred ceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
...++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 119 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 119 KPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp SSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred CCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcch
Confidence 34899999999999999986432 2367899999999998 99999999999999999999999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTS 869 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~ 869 (929)
....... .........+|+.|+|||++.+..++.++||||+|++++++.. ...++..... ..+......
T Consensus 196 ~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-------~~~~~~~~~ 265 (333)
T 1mqb_A 196 VLEDDPE---ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-------HEVMKAIND 265 (333)
T ss_dssp ------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHT
T ss_pred hhccccc---cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH-------HHHHHHHHC
Confidence 7643211 1111223356889999999999999999999999987776543 3322222111 111111111
Q ss_pred c--chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhh
Q 002376 870 N--ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLK 919 (929)
Q Consensus 870 ~--~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 919 (929)
. .......++ .+.+++.+||+.||++||+++|+++.|+++.+....
T Consensus 266 ~~~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 313 (333)
T 1mqb_A 266 GFRLPTPMDCPS----AIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313 (333)
T ss_dssp TCCCCCCTTCBH----HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred CCcCCCcccCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 0 001111112 223377799999999999999999999998876553
No 167
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.97 E-value=1.6e-32 Score=296.10 Aligned_cols=237 Identities=24% Similarity=0.268 Sum_probs=172.6
Q ss_pred hhCCCCCceeecccCceeEEecccc--------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCC
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERT--------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~--------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 718 (929)
..++|...+.||+|+||.||+|++. ...+.|.+|+.++++++||||+++++++...
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---- 85 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE---- 85 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS----
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC----
Confidence 3467889999999999999998632 1246788999999999999999999997532
Q ss_pred cceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
..++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 86 --~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 160 (281)
T 3cc6_A 86 --PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLS 160 (281)
T ss_dssp --SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGG
T ss_pred --CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCC
Confidence 2589999999999999986432 2357899999999998 9999999999999999999999999999
Q ss_pred cccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhc
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMT 868 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~ 868 (929)
+...... ........||+.|+|||++.+..++.++||||+|++++++.. ...++..... .+.. ..+....
T Consensus 161 ~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~--~~~~-~~~~~~~- 231 (281)
T 3cc6_A 161 RYIEDED-----YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN--KDVI-GVLEKGD- 231 (281)
T ss_dssp GCC--------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG--GGHH-HHHHHTC-
T ss_pred ccccccc-----ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh--HHHH-HHHhcCC-
Confidence 8653221 111233467889999999998899999999999987776543 3333221111 1110 0111100
Q ss_pred ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 869 SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
....... ....+.+++.+||+.||++||++.|+++.|+++.+...
T Consensus 232 -~~~~~~~----~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 276 (281)
T 3cc6_A 232 -RLPKPDL----CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEK 276 (281)
T ss_dssp -CCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -CCCCCCC----CCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhh
Confidence 0000111 12223347779999999999999999999999877543
No 168
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.97 E-value=3.8e-33 Score=305.70 Aligned_cols=217 Identities=27% Similarity=0.257 Sum_probs=156.5
Q ss_pred CCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..++||+|+||+||+|++.. ....+.+|+..+.++ +|||||+++++|.+ ...
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~-----~~~ 131 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE-----GGI 131 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe-----CCE
Confidence 578999999999999999987651 123455666666555 89999999999954 345
Q ss_pred EEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.++||||+ +|+|.+++.... .++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~ 207 (311)
T 3p1a_A 132 LYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207 (311)
T ss_dssp EEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEEC
T ss_pred EEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeec
Confidence 89999999 679988876322 3467999999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc---hhhhccChHHHHhhcc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE---NVLQVLDPELRQLMTS 869 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~ 869 (929)
... .......||++|+|||++.+ .++.++||||+|++++++.... ..+. ...++.....
T Consensus 208 ~~~-------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~----~~~~~~~~~~~~~~~~~------ 269 (311)
T 3p1a_A 208 GTA-------GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNM----ELPHGGEGWQQLRQGYL------ 269 (311)
T ss_dssp C-------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTC----CCCSSHHHHHHHTTTCC------
T ss_pred ccC-------CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCC----CCCCCccHHHHHhccCC------
Confidence 321 11233469999999999876 7999999999997766643321 1121 1111111000
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.......+...+.+++.+|++.||++|||++|+++
T Consensus 270 ----~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 270 ----PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ----CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ----CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 00011112222334777999999999999999985
No 169
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.97 E-value=1.3e-32 Score=302.86 Aligned_cols=228 Identities=22% Similarity=0.242 Sum_probs=169.5
Q ss_pred hCCCCCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHccCCccccceeeecccCCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSK 717 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 717 (929)
.++|+..+.||+|+||.||+|+... ..+.+.+|+.++++++||||+++++++...
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 87 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR--- 87 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS---
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecC---
Confidence 3568899999999999999987541 246799999999999999999999998543
Q ss_pred CcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC----ceEEec
Q 002376 718 NMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM----TAKVGD 785 (929)
Q Consensus 718 ~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~----~~ki~D 785 (929)
...++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||++++++ .+||+|
T Consensus 88 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~D 162 (321)
T 2a2a_A 88 --TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (321)
T ss_dssp --SEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred --CEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEcc
Confidence 34899999999999999986433 3367899999999998 999999999999999888 799999
Q ss_pred cccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHH
Q 002376 786 FGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQ 865 (929)
Q Consensus 786 fGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 865 (929)
||+++..... .......||+.|+|||++.+..++.++||||+|++++++.....++..... .+.+. .+..
T Consensus 163 fg~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~-~i~~ 232 (321)
T 2a2a_A 163 FGLAHEIEDG-------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLA-NITS 232 (321)
T ss_dssp CTTCEECCTT-------CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHH-HHHT
T ss_pred CccceecCcc-------ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH--HHHHH-HHHh
Confidence 9999865321 112335799999999999999999999999999877665544333322111 11100 0110
Q ss_pred hhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 866 LMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.............+..+.+++.+|++.||++|||++|+++
T Consensus 233 ---~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 233 ---VSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp ---TCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ---cccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0000011111112223344777999999999999999985
No 170
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.97 E-value=1.1e-32 Score=302.73 Aligned_cols=249 Identities=19% Similarity=0.292 Sum_probs=181.5
Q ss_pred CChHHHHHhhCCCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHcc-CCccccce
Q 002376 651 ISYDELRRATGNFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNV-RHRNLVKL 707 (929)
Q Consensus 651 ~~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l-~Hpniv~l 707 (929)
+...++....++|+..+.||+|+||.||+|++. ...+.+.+|+++++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 445555666789999999999999999998631 1235688999999999 79999999
Q ss_pred eeecccCCCCCcceEEEEEEecCCCCcccccccccc------------------------ccccHHHHHHHhhhCCCCCE
Q 002376 708 ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGERK------------------------NELDITSALDYLHNDCEVPV 763 (929)
Q Consensus 708 ~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~------------------------~~~~ia~aL~yLH~~~~~~i 763 (929)
++++...+ ...++||||+++|+|.+++..... ++.|++.||+|||+. +|
T Consensus 97 ~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i 169 (316)
T 2xir_A 97 LGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KC 169 (316)
T ss_dssp EEEECCTT----SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred EEEEecCC----CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 99986432 247999999999999999864321 246899999999998 99
Q ss_pred EecCCCCCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch
Q 002376 764 VHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI 843 (929)
Q Consensus 764 iHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~ 843 (929)
+||||||+||+++.++.+||+|||+++..... ..........||+.|+|||++.+..++.++||||+|++++++..
T Consensus 170 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t 245 (316)
T 2xir_A 170 IHRDLAARNILLSEKNVVKICDFGLARDIYKD----PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245 (316)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCGGGSCTTTC----TTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred ccccCccceEEECCCCCEEECCCccccccccC----ccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHh
Confidence 99999999999999999999999999865321 11112234568999999999999999999999999987766543
Q ss_pred -hHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 844 -VKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 844 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
...++.... .+..+.......... ..+.....-+.+++.+||+.||++|||++|+++.|+++.+...
T Consensus 246 ~g~~p~~~~~------~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 246 LGASPYPGVK------IDEEFCRRLKEGTRM--RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp TSCCSSTTCC------CSHHHHHHHHHTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred CCCCCCcccc------hhHHHHHHhccCccC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 322222111 111111111110000 0000111122337779999999999999999999999987654
No 171
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.97 E-value=2.3e-32 Score=295.90 Aligned_cols=229 Identities=22% Similarity=0.279 Sum_probs=168.0
Q ss_pred hCCCCCceeecccCceeEEeccccC-----------------------cHHHHHHHHHHHHccCCccccceeeecccCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-----------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS 716 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~ 716 (929)
.++|+..+.||+|+||.||+|++.. ..+.+.+|++++++++||||+++++++.+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-- 95 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP-- 95 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT--
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC--
Confidence 4678899999999999999987641 016789999999999999999999998432
Q ss_pred CCcceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCC--EEecCCCCCCeeecCCCc-----
Q 002376 717 KNMEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVP--VVHSDLKPGNILLDEEMT----- 780 (929)
Q Consensus 717 ~~~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~--iiHrDlk~~NILl~~~~~----- 780 (929)
.++||||+++|+|.+++.... .++.|++.||+|||+. + |+||||||+||+++.++.
T Consensus 96 -----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~ 167 (287)
T 4f0f_A 96 -----PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVC 167 (287)
T ss_dssp -----TEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCC
T ss_pred -----CeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCcee
Confidence 279999999999988875332 2467899999999998 7 999999999999988776
Q ss_pred eEEeccccccccccccCCCCCccccceeccccccccccccC--CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhc
Q 002376 781 AKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGL--GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQV 858 (929)
Q Consensus 781 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~ 858 (929)
+||+|||+++.... ......||+.|+|||++. ...++.++||||+|++++++.....++..........
T Consensus 168 ~kl~Dfg~~~~~~~---------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~ 238 (287)
T 4f0f_A 168 AKVADFGLSQQSVH---------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF 238 (287)
T ss_dssp EEECCCTTCBCCSS---------CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH
T ss_pred EEeCCCCccccccc---------cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH
Confidence 99999999974321 123457999999999984 4557899999999987777655544443322210000
Q ss_pred cChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhh
Q 002376 859 LDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSS 913 (929)
Q Consensus 859 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~ 913 (929)
......... .. ..++..+..+.+++.+||+.||++|||++|+++.|+++
T Consensus 239 ~~~~~~~~~--~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 239 INMIREEGL--RP----TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHHHHHSCC--CC----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred HHHHhccCC--CC----CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 000000000 00 01111122233477799999999999999999999864
No 172
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.97 E-value=1.2e-32 Score=296.68 Aligned_cols=241 Identities=20% Similarity=0.262 Sum_probs=175.7
Q ss_pred HhhCCCCCceeecccCceeEEecccc--------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 658 RATGNFSHENLIGSGSFGSVLHNERT--------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 658 ~~~~~~~~~~~iG~G~~g~Vy~~~~~--------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
...++|+..+.||+|+||.||+|+.. ...+.|.+|++++++++||||+++++++... ..+
T Consensus 10 v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~ 83 (279)
T 1qpc_A 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE------PIY 83 (279)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS------SCE
T ss_pred cCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCC------CcE
Confidence 34567889999999999999998754 1356899999999999999999999998532 269
Q ss_pred EEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 84 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 160 (279)
T 1qpc_A 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 160 (279)
T ss_dssp EEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCccccccc
Confidence 9999999999999987432 2367899999999998 99999999999999999999999999998653
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
... ........|++.|+|||++.+..++.++||||+|++++++.. ...++..... ..+.........
T Consensus 161 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-------~~~~~~~~~~~~ 228 (279)
T 1qpc_A 161 DNE-----YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-------PEVIQNLERGYR 228 (279)
T ss_dssp SSC-----EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-------HHHHHHHHTTCC
T ss_pred Ccc-----cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH-------HHHHHHHhcccC
Confidence 211 111223457889999999988889999999999977666543 2222221111 111111100000
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhhcc
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLKQQ 921 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~ 921 (929)
..........+.+++.+|++.||++|||++++++.|+++......+.
T Consensus 229 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~ 275 (279)
T 1qpc_A 229 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQY 275 (279)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC----
T ss_pred --CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccCCC
Confidence 00001111223337779999999999999999999999987755443
No 173
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.97 E-value=1.4e-32 Score=297.98 Aligned_cols=227 Identities=24% Similarity=0.346 Sum_probs=165.9
Q ss_pred CCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 662 NFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
.|+..+.||+|+||.||+|.+.. ..+.+.+|+.++++++||||+++++++.... ......+
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~~ 105 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKCIV 105 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES-SSCEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc-CCCceEE
Confidence 46777899999999999987641 2356889999999999999999999886533 2345689
Q ss_pred EEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCC--EEecCCCCCCeeec-CCCceEEecccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVP--VVHSDLKPGNILLD-EEMTAKVGDFGLARFL 792 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~--iiHrDlk~~NILl~-~~~~~ki~DfGla~~~ 792 (929)
+||||+++|+|.+++.... .++.+++.||+|||+. + |+||||||+||+++ +++.+||+|||+++..
T Consensus 106 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 9999999999999986422 3367899999999998 6 99999999999997 7899999999999754
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
.. .......||+.|+|||++.+ .++.++||||+|++++++.....++...... .+ ..........
T Consensus 183 ~~--------~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~-----~~~~~~~~~~ 247 (290)
T 1t4h_A 183 RA--------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-AQ-----IYRRVTSGVK 247 (290)
T ss_dssp CT--------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-HH-----HHHHHTTTCC
T ss_pred cc--------cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcH-HH-----HHHHHhccCC
Confidence 21 12234579999999998864 5999999999998777765544444322210 00 1110000000
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
...........+.+++.+||+.||++|||++|+++
T Consensus 248 -~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 248 -PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -ccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 00011111112333777999999999999999985
No 174
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.97 E-value=1.2e-32 Score=296.76 Aligned_cols=225 Identities=21% Similarity=0.279 Sum_probs=166.4
Q ss_pred hhCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
+.++|+..+.||+|+||.||+|+... ..+.+.+|+.++++++||||+++++++.+.
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 81 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA----- 81 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecC-----
Confidence 35688999999999999999997652 134688999999999999999999998543
Q ss_pred ceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
...++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~ 158 (279)
T 3fdn_A 82 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVH 158 (279)
T ss_dssp SEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESC
T ss_pred CEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEecccccc
Confidence 34899999999999999886432 3467899999999998 999999999999999999999999999865
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
.... ......||+.|+|||++.+..++.++||||+|++++++.....++..... .+.. ..+... ..
T Consensus 159 ~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~-~~~~~~---~~ 224 (279)
T 3fdn_A 159 APSS--------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--QETY-KRISRV---EF 224 (279)
T ss_dssp C----------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH--HHHH-HHHHHT---CC
T ss_pred CCcc--------cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH--HHHH-HHHHhC---CC
Confidence 4211 12345789999999999999999999999999777665444333322111 1111 111110 01
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
... +.....+++++.+||+.||++|||++|+++.
T Consensus 225 ~~~----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 225 TFP----DFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CCC----TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CCC----CcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 111 1112223347779999999999999999863
No 175
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.97 E-value=1e-32 Score=299.35 Aligned_cols=246 Identities=20% Similarity=0.228 Sum_probs=176.9
Q ss_pred hhCCCCCce-eecccCceeEEecccc--------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCC
Q 002376 659 ATGNFSHEN-LIGSGSFGSVLHNERT--------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSK 717 (929)
Q Consensus 659 ~~~~~~~~~-~iG~G~~g~Vy~~~~~--------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 717 (929)
..++|...+ .||+|+||.||+|.+. ...+++.+|++++++++||||+++++++..
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 89 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA---- 89 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES----
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC----
Confidence 345677777 9999999999998431 014678899999999999999999999832
Q ss_pred CcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 718 NMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 718 ~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
...++||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 90 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 164 (291)
T 1xbb_A 90 --ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS 164 (291)
T ss_dssp --SSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred --CCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcc
Confidence 23799999999999999987433 3367899999999998 9999999999999999999999999999
Q ss_pred cccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhc
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMT 868 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~ 868 (929)
+....... .........||+.|+|||++.+..++.++||||+|++++++.. ...++..... ..+.....
T Consensus 165 ~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~~~~~~~ 234 (291)
T 1xbb_A 165 KALRADEN---YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-------SEVTAMLE 234 (291)
T ss_dssp EECCTTCS---EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH-------HHHHHHHH
T ss_pred eeeccCCC---cccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH-------HHHHHHHH
Confidence 86632211 1111223356789999999998889999999999977766543 3333222111 11111111
Q ss_pred ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhhccCCCC
Q 002376 869 SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLKQQVPNG 925 (929)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~~p~~ 925 (929)
.... ...+...+..+.+++.+||+.||++||++.|++++|+++.........|++
T Consensus 235 ~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~~~~~ 289 (291)
T 1xbb_A 235 KGER--MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEGHHHH 289 (291)
T ss_dssp TTCC--CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHHHHC--
T ss_pred cCCC--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhcccccc
Confidence 1100 000011122233377799999999999999999999999888776655543
No 176
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.97 E-value=8.6e-33 Score=329.74 Aligned_cols=235 Identities=20% Similarity=0.275 Sum_probs=170.0
Q ss_pred CCCce-eecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 663 FSHEN-LIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 663 ~~~~~-~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
+...+ .||+|+||.||+|.+. ...++|.+|++++++++|||||+++++|.. +..
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------~~~ 410 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------EAL 410 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------SSE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------CCe
Confidence 33344 7999999999988542 235789999999999999999999999853 127
Q ss_pred EEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
++|||||++|+|.+++...+ .++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 411 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 411 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487 (613)
T ss_dssp EEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred EEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence 99999999999999986432 2367899999999998 99999999999999999999999999998764
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
.... .........+|+.|||||++.+..++.++||||+|++++++.. ...++..... ..+...+....
T Consensus 488 ~~~~---~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-------~~~~~~i~~~~- 556 (613)
T 2ozo_A 488 ADDS---YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-------PEVMAFIEQGK- 556 (613)
T ss_dssp -----------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS-------HHHHHHHHTTC-
T ss_pred CCCc---eeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH-------HHHHHHHHcCC-
Confidence 2211 1111222356789999999999999999999999987777543 3333322211 11221111111
Q ss_pred hhhhhh-HHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhh
Q 002376 873 QTIQLH-DCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLK 919 (929)
Q Consensus 873 ~~~~~~-~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 919 (929)
+...+ .+...+.+ ++.+||+.||++||++++++++|+++......
T Consensus 557 -~~~~p~~~~~~l~~-li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~ 602 (613)
T 2ozo_A 557 -RMECPPECPPELYA-LMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 602 (613)
T ss_dssp -CCCCCTTCCHHHHH-HHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred -CCCCCCcCCHHHHH-HHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence 00111 11223333 77899999999999999999999998877653
No 177
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.97 E-value=2.6e-32 Score=302.25 Aligned_cols=240 Identities=19% Similarity=0.319 Sum_probs=175.9
Q ss_pred hCCCCCceeecccCceeEEecccc------------------------CcHHHHHHHHHHHHcc-CCccccceeeecccC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT------------------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSL 714 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~------------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~ 714 (929)
.++|+..+.||+|+||.||+|++. ...+.+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 468889999999999999998642 1235688999999999 899999999999653
Q ss_pred CCCCcceEEEEEEecCCCCccccccccc------------------------cccccHHHHHHHhhhCCCCCEEecCCCC
Q 002376 715 DSKNMEFLALVYEFLSNGSLGDWIHGER------------------------KNELDITSALDYLHNDCEVPVVHSDLKP 770 (929)
Q Consensus 715 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~------------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~ 770 (929)
+ ..++||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||
T Consensus 114 ~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 185 (334)
T 2pvf_A 114 G-----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 185 (334)
T ss_dssp S-----CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred C-----ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCcc
Confidence 3 4799999999999999986432 1256899999999998 999999999
Q ss_pred CCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhh
Q 002376 771 GNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVES 849 (929)
Q Consensus 771 ~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~ 849 (929)
+||+++.++.+||+|||+++...... .........||+.|+|||++.+..++.++||||+|++++++.+ ...++.
T Consensus 186 ~NIll~~~~~~kL~Dfg~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 261 (334)
T 2pvf_A 186 RNVLVTENNVMKIADFGLARDINNID----YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261 (334)
T ss_dssp GGEEECTTCCEEECCCTTCEECTTTS----SEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred ceEEEcCCCCEEEccccccccccccc----cccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcC
Confidence 99999999999999999998653211 1111233467889999999988889999999999987766543 222222
Q ss_pred cCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhhc
Q 002376 850 NLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLKQ 920 (929)
Q Consensus 850 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~ 920 (929)
..+ ..++.. .+..... .......+ ..+. +++.+||+.||++|||++|+++.|+++.......
T Consensus 262 ~~~--~~~~~~-~~~~~~~--~~~~~~~~---~~l~-~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~ 323 (334)
T 2pvf_A 262 GIP--VEELFK-LLKEGHR--MDKPANCT---NELY-MMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNE 323 (334)
T ss_dssp TCC--HHHHHH-HHHHTCC--CCCCTTCC---HHHH-HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred cCC--HHHHHH-HHhcCCC--CCCCccCC---HHHH-HHHHHHccCChhhCcCHHHHHHHHHHHHhccccC
Confidence 111 111111 1111000 00111111 2233 3777999999999999999999999998876543
No 178
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.97 E-value=3.4e-33 Score=312.68 Aligned_cols=227 Identities=26% Similarity=0.309 Sum_probs=161.2
Q ss_pred hCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHH-HHccCCccccceeeecccCCCCCc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECET-LRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~-l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
.++|+..+.||+|+||+||+++... ..+.+.+|..+ ++.++|||||++++++.+ .
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~-----~ 111 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-----A 111 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC-----S
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe-----C
Confidence 3578899999999999999987652 12345567666 567899999999999854 3
Q ss_pred ceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
...|+||||+++|+|.+++...+ .++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 112 ~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~ 188 (373)
T 2r5t_A 112 DKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKE 188 (373)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred CEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccc
Confidence 35899999999999999886432 3467999999999998 999999999999999999999999999986
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
.... .......+||+.|||||++.+..++.++||||+|+++|++..+..++.... ..+..+..+.. ..
T Consensus 189 ~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--~~~~~~~i~~~----~~ 256 (373)
T 2r5t_A 189 NIEH------NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN--TAEMYDNILNK----PL 256 (373)
T ss_dssp GBCC------CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB--HHHHHHHHHHS----CC
T ss_pred cccC------CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHhc----cc
Confidence 4211 112344689999999999999999999999999988777655444432211 11111111111 11
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRL 910 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L 910 (929)
..... +...+++++.+|++.||++||++.+.++.+
T Consensus 257 ~~~~~----~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 257 QLKPN----ITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp CCCSS----SCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred CCCCC----CCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 11111 222233477799999999999986544443
No 179
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.97 E-value=6.4e-34 Score=313.06 Aligned_cols=259 Identities=22% Similarity=0.266 Sum_probs=171.7
Q ss_pred hHHHHHhhCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHccCCccccceeeecccCCCC
Q 002376 653 YDELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSK 717 (929)
Q Consensus 653 ~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 717 (929)
.++.....++|+..+.||+|+||.||+|+..+ ..+.|.+|+.++++++||||+++++++...+
T Consensus 25 ~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-- 102 (319)
T 2y4i_B 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP-- 102 (319)
T ss_dssp GGGSSSCCSCEECCCBCCCSSSSEEEEEEESSSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS--
T ss_pred cccccCCHHHeEEeeEeccCCceEEEEEEEcCeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--
Confidence 34444556789999999999999999987542 2346778999999999999999999996533
Q ss_pred CcceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccc
Q 002376 718 NMEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788 (929)
Q Consensus 718 ~~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGl 788 (929)
..++||||+++|+|.++++... .++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+
T Consensus 103 ---~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~ 175 (319)
T 2y4i_B 103 ---HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGL 175 (319)
T ss_dssp ---CEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSC
T ss_pred ---ceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCC
Confidence 4899999999999999987533 2367899999999998 999999999999998 67999999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCC---------CCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhcc
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG---------ERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVL 859 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~ 859 (929)
++........ ..........||+.|+|||++.+ ..++.++||||+|++++++.....++..... .+..
T Consensus 176 ~~~~~~~~~~-~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~ 252 (319)
T 2y4i_B 176 FSISGVLQAG-RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA--EAII 252 (319)
T ss_dssp CC-----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH--HHHH
T ss_pred cccccccccc-ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHH
Confidence 8765321111 11112233469999999999875 4579999999999877776554444332221 1110
Q ss_pred ChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhhccCCCCCCCC
Q 002376 860 DPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLKQQVPNGKTKS 929 (929)
Q Consensus 860 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~~p~~~~~s 929 (929)
..+........ .....++.+. +++.+||+.||++|||++|++++|+++.+.......|...++|
T Consensus 253 -~~~~~~~~~~~-~~~~~~~~l~----~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~~~~~~~~~~ 316 (319)
T 2y4i_B 253 -WQMGTGMKPNL-SQIGMGKEIS----DILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSHPGHFWKS 316 (319)
T ss_dssp -HHHHTTCCCCC-CCSSCCTTHH----HHHHHHHCSSTTTSCCHHHHHHHHTTC----------------
T ss_pred -HHhccCCCCCC-CcCCCCHHHH----HHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccCCCCcccccc
Confidence 01111000000 0001112222 3777999999999999999999999999988777777766553
No 180
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.97 E-value=9.2e-33 Score=304.27 Aligned_cols=242 Identities=20% Similarity=0.265 Sum_probs=178.8
Q ss_pred CChHHHHHhhCCCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHccCCcccccee
Q 002376 651 ISYDELRRATGNFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNVRHRNLVKLI 708 (929)
Q Consensus 651 ~~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l~Hpniv~l~ 708 (929)
+..++++...++|+..+.||+|+||.||+|++. .....|.+|++++++++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 444556667789999999999999999997643 1234688999999999999999999
Q ss_pred eecccCCCCCcceEEEEEEecCCCCccccccccc------------------cccccHHHHHHHhhhCCCCCEEecCCCC
Q 002376 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER------------------KNELDITSALDYLHNDCEVPVVHSDLKP 770 (929)
Q Consensus 709 ~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~ 770 (929)
+++...+ ..++||||+++|+|.++++..+ .++.|++.||+|||+. +|+||||||
T Consensus 95 ~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp 166 (322)
T 1p4o_A 95 GVVSQGQ-----PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAA 166 (322)
T ss_dssp EEECSSS-----SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSG
T ss_pred EEEccCC-----ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCcc
Confidence 9985533 3799999999999999986421 2356899999999998 999999999
Q ss_pred CCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhh
Q 002376 771 GNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVES 849 (929)
Q Consensus 771 ~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~ 849 (929)
+||+++.++.+||+|||+++....... ........||+.|+|||++.+..++.++||||+|++++++.. ...++.
T Consensus 167 ~NIli~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 242 (322)
T 1p4o_A 167 RNCMVAEDFTVKIGDFGMTRDIYETDY----YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 242 (322)
T ss_dssp GGEEECTTCCEEECCTTCCCGGGGGGC----EEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTT
T ss_pred ceEEEcCCCeEEECcCccccccccccc----cccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccc
Confidence 999999999999999999986532211 111223467899999999999999999999999987776544 222222
Q ss_pred cCCchhhhccChHHHHhhccc--chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHH
Q 002376 850 NLPENVLQVLDPELRQLMTSN--ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQE 915 (929)
Q Consensus 850 ~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~ 915 (929)
.... . ......... ...... ....+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 243 ~~~~--~-----~~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 243 GLSN--E-----QVLRFVMEGGLLDKPDN----CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp TSCH--H-----HHHHHHHTTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred cCCH--H-----HHHHHHHcCCcCCCCCC----CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 2111 1 111111000 000111 11223337779999999999999999999998744
No 181
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.97 E-value=1.3e-32 Score=301.04 Aligned_cols=237 Identities=24% Similarity=0.291 Sum_probs=168.3
Q ss_pred hhCCCCCceeecccCceeEEeccccC---------------------cHHHHHHHHHHHHccC---CccccceeeecccC
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG---------------------SWKSFIAECETLRNVR---HRNLVKLITSCSSL 714 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~---------------------~~~~~~~E~~~l~~l~---Hpniv~l~~~~~~~ 714 (929)
..++|+..+.||+|+||.||+|++.. ....+.+|++++++++ ||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 35789999999999999999998541 1246778888887775 99999999999765
Q ss_pred CCCCcceEEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEe
Q 002376 715 DSKNMEFLALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVG 784 (929)
Q Consensus 715 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~ 784 (929)
........++||||++ |+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 5444456899999996 69999886432 2367899999999998 89999999999999999999999
Q ss_pred ccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHH
Q 002376 785 DFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELR 864 (929)
Q Consensus 785 DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 864 (929)
|||+++..... .......||+.|+|||++.+..++.++||||+|++++++.....++..... .+.......
T Consensus 163 Dfg~a~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~i~~ 233 (308)
T 3g33_A 163 DFGLARIYSYQ-------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE--ADQLGKIFD 233 (308)
T ss_dssp SCSCTTTSTTC-------CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH--HHHHHHHHH
T ss_pred eCccccccCCC-------cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHH
Confidence 99999865321 122345799999999999999999999999999887776554433322211 000000000
Q ss_pred Hh------------------hcccc-hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 865 QL------------------MTSNE-SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 865 ~~------------------~~~~~-~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.. +.... .........+.+.+.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 234 LIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00 00000 0000000011222334777999999999999999975
No 182
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.97 E-value=1.7e-32 Score=298.19 Aligned_cols=249 Identities=18% Similarity=0.181 Sum_probs=179.8
Q ss_pred hCCCCCceeecccCceeEEecccc--------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT--------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~--------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV 725 (929)
.++|+..+.||+|+||.||+|++. ...+++.+|+.+++.++|+++++.++++... ....++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~----~~~~~lv 83 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAE----GDYNVMV 83 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEE----TTEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCC----CCceEEE
Confidence 568999999999999999999853 1235789999999999999988888777542 3357999
Q ss_pred EEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeee---cCCCceEEeccccccccc
Q 002376 726 YEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILL---DEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl---~~~~~~ki~DfGla~~~~ 793 (929)
|||+ +|+|.+++.... .++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||+++...
T Consensus 84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 159 (296)
T 3uzp_A 84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence 9999 899999986221 3367899999999998 99999999999999 588899999999998764
Q ss_pred cccCCCC-CccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhcccc
Q 002376 794 ERVDNQS-SISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 794 ~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~ 871 (929)
....... .........||+.|+|||++.+..++.++||||+|++++++.....++..... ...+.+...........
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~- 238 (296)
T 3uzp_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP- 238 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-
T ss_pred ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc-
Confidence 3321110 11122445799999999999999999999999999888776665555443221 11111111011100000
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhh
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLK 919 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 919 (929)
.......+++-+.+++.+||+.||++|||++|+++.|+++......
T Consensus 239 --~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 239 --IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp --HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred --hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 0000011112233377799999999999999999999998877553
No 183
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=4.2e-32 Score=293.81 Aligned_cols=246 Identities=20% Similarity=0.236 Sum_probs=179.6
Q ss_pred CCCCCce-eecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 661 GNFSHEN-LIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 661 ~~~~~~~-~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
++|...+ .||+|+||.||+|.+. ...+.+.+|++++++++||||+++++++.. +
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~----- 82 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E----- 82 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-S-----
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC-C-----
Confidence 3555555 8999999999998642 124578899999999999999999999832 1
Q ss_pred eEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..++||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 83 ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred CcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceee
Confidence 2799999999999999985322 2367899999999998 999999999999999999999999999987
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
...... .........||+.|+|||++.+..++.++||||+|++++++.. ...++..... ..+.......
T Consensus 160 ~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-------~~~~~~i~~~ 229 (287)
T 1u59_A 160 LGADDS---YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-------PEVMAFIEQG 229 (287)
T ss_dssp CTTCSC---EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT-------HHHHHHHHTT
T ss_pred eccCcc---eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-------HHHHHHHhcC
Confidence 642211 1111223357899999999988889999999999987776543 3333322211 1111111111
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhhccCCCCCC
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLKQQVPNGKT 927 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~~p~~~~ 927 (929)
.. ...+...+..+.+++.+||+.||++||++.|+++.|+++......+..++++.
T Consensus 230 ~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~~~~~~ 284 (287)
T 1u59_A 230 KR--MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGHHHH 284 (287)
T ss_dssp CC--CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCSSCCCT
T ss_pred Cc--CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcccCCccc
Confidence 00 00001112223337779999999999999999999999999988776665543
No 184
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.97 E-value=2.3e-32 Score=313.33 Aligned_cols=180 Identities=23% Similarity=0.320 Sum_probs=142.1
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.++|...+.||+|+||.||+|++.. ..+.+.+|++++++++|||||++++++...+......
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 4689999999999999999997541 2357889999999999999999999997654333356
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.|+||||++ |+|.++++... .++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+...
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred EEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 899999996 69999887433 3467999999999998 99999999999999999999999999998764
Q ss_pred cccCCCC----------------Cccccceecccccccccccc-CCCCCCCCCCCCCCcCCCCCcch
Q 002376 794 ERVDNQS----------------SISSTHVFMGSIGYVPPEYG-LGERPSTAGDVPTSESFAGEFNI 843 (929)
Q Consensus 794 ~~~~~~~----------------~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DV~s~g~~~~~~~~ 843 (929)
....... ........+||+.|+|||++ .+..++.++||||+||+++++..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~ 247 (432)
T 3n9x_A 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHT
T ss_pred ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHh
Confidence 3211100 00123456899999999986 55669999999999998888654
No 185
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.97 E-value=2.5e-32 Score=299.12 Aligned_cols=242 Identities=22% Similarity=0.292 Sum_probs=165.4
Q ss_pred hCCCCCceeecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.++|+..+.||+|+||.||+|... ...+.+.+|+.++++++||||+++++++... .
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~ 105 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED-----N 105 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-----T
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-----C
Confidence 357889999999999999998753 1235688999999999999999999998653 3
Q ss_pred eEEEEEEecCCCCcccccccc------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGE------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGl 788 (929)
..++||||+++|+|.+++... ..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~ 182 (310)
T 2wqm_A 106 ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGL 182 (310)
T ss_dssp EEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC--
T ss_pred cEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccc
Confidence 489999999999999988631 13367899999999998 999999999999999999999999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhc
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMT 868 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 868 (929)
++...... .......||+.|+|||++.+..++.++||||+|++++++.....++........ .+.....
T Consensus 183 ~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~ 251 (310)
T 2wqm_A 183 GRFFSSKT------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-----SLCKKIE 251 (310)
T ss_dssp ----------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHH-----HHHHHHH
T ss_pred eeeecCCC------ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHH-----HHHHHhh
Confidence 98653211 112335789999999999999999999999999877765544333221111110 1111110
Q ss_pred ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhhcc
Q 002376 869 SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLKQQ 921 (929)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~ 921 (929)
....... ........+.+++.+||+.||++|||++|+++.|+++++....+.
T Consensus 252 ~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~ 303 (310)
T 2wqm_A 252 QCDYPPL-PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL 303 (310)
T ss_dssp TTCSCCC-CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred cccCCCC-cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhh
Confidence 0000000 001112223337779999999999999999999999988866443
No 186
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.97 E-value=7.7e-33 Score=309.45 Aligned_cols=228 Identities=21% Similarity=0.248 Sum_probs=159.2
Q ss_pred hCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
.++|+..+.||+|+||.||+++... ..+.+.+|+.++++++|||||++++++.+. ...++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~~~l 93 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTP-----THLAI 93 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECS-----SEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeC-----CEEEE
Confidence 4689999999999999999987651 236788999999999999999999999643 34899
Q ss_pred EEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCc--eEEecccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMT--AKVGDFGLARFLLE 794 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~--~ki~DfGla~~~~~ 794 (929)
||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+|+....
T Consensus 94 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 94 IMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred EEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 999999999999886322 3467999999999998 9999999999999987765 99999999974321
Q ss_pred ccCCCCCccccceeccccccccccccCCCCCCCC-CCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc--
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTA-GDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE-- 871 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-- 871 (929)
. ......+||+.|+|||++.+..++.+ +||||+|+++|++..+..++..... .+.....+........
T Consensus 171 ~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~~~~~~~~~~~~~ 241 (361)
T 3uc3_A 171 H-------SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE--PRDYRKTIQRILSVKYSI 241 (361)
T ss_dssp -----------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC------CCCHHHHHHHHHTTCCCC
T ss_pred c-------CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCcc--HHHHHHHHHHHhcCCCCC
Confidence 1 11234579999999999988887666 8999999877765554443322211 0000111111111110
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
......++ .+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~s~----~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 242 PDDIRISP----ECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp CTTSCCCH----HHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCcCCCCH----HHHHHHHHHccCChhHCcCHHHHHh
Confidence 00001112 2233777999999999999999975
No 187
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.97 E-value=5e-33 Score=324.48 Aligned_cols=228 Identities=23% Similarity=0.293 Sum_probs=169.6
Q ss_pred hCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.++|+..++||+|+||+||+|+... ..+.+.+|++++++++|||||++++++.+ ..
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-----~~ 257 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-----KD 257 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee-----CC
Confidence 4578889999999999999987641 23457899999999999999999999854 33
Q ss_pred eEEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
..|+||||+++|+|.+++.... .++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+
T Consensus 258 ~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~ 334 (576)
T 2acx_A 258 ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAV 334 (576)
T ss_dssp EEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccce
Confidence 5899999999999999886432 2357899999999998 99999999999999999999999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhccc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
.+... ......+||+.|||||++.+..++.++||||+|+++|++..+..++...... .....+.......
T Consensus 335 ~~~~~-------~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~---~~~~~i~~~i~~~ 404 (576)
T 2acx_A 335 HVPEG-------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK---IKREEVERLVKEV 404 (576)
T ss_dssp ECCTT-------CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC---CCHHHHHHHHHHC
T ss_pred ecccC-------ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccc---hhHHHHHHHhhcc
Confidence 65321 1123458999999999999999999999999998877765544443322110 0001111111100
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRI-----GIREALR 908 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 908 (929)
. ...+..++.-+++++.+|++.||++|| +++||++
T Consensus 405 ~---~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 405 P---EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp C---CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred c---ccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 0 001111222334477799999999999 7788864
No 188
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.97 E-value=1.2e-32 Score=303.72 Aligned_cols=225 Identities=24% Similarity=0.260 Sum_probs=159.0
Q ss_pred hCCCCCceeecccCceeEEecccc-----------------------CcHHHHHHHHHHHHccCCccccceeeecccCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT-----------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDS 716 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~-----------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~ 716 (929)
.++|+..+.||+|+||.||+++.. .....+.+|++++++++||||+++++++...
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-- 93 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTG-- 93 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECS--
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcC--
Confidence 457899999999999999987652 0123577899999999999999999998543
Q ss_pred CCcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccc
Q 002376 717 KNMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788 (929)
Q Consensus 717 ~~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGl 788 (929)
...|+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 94 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 167 (327)
T 3a62_A 94 ---GKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGL 167 (327)
T ss_dssp ---SCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred ---CEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCc
Confidence 34899999999999999886432 2367899999999998 999999999999999999999999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhc
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMT 868 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 868 (929)
++..... .......+||+.|+|||++.+..++.++||||+|+++|++.....++.... ..+.++.....
T Consensus 168 ~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~--- 236 (327)
T 3a62_A 168 CKESIHD------GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN--RKKTIDKILKC--- 236 (327)
T ss_dssp C----------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHT---
T ss_pred ccccccC------CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC--HHHHHHHHHhC---
Confidence 9854221 111234579999999999999999999999999987776554433332211 11111111111
Q ss_pred ccchhhhhhhHHHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 002376 869 SNESQTIQLHDCLITIIGSVGLSCTTESPGGRI-----GIREALR 908 (929)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 908 (929)
....... +...+++++.+||+.||++|| +++|+++
T Consensus 237 -~~~~p~~----~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 237 -KLNLPPY----LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp -CCCCCTT----SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred -CCCCCCC----CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 1111111 222233477799999999999 6677764
No 189
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.97 E-value=2e-32 Score=307.20 Aligned_cols=236 Identities=13% Similarity=0.060 Sum_probs=175.5
Q ss_pred HHhhCCCCCceeecccCceeEEeccc-----c-------------CcHHHHHHHHHHHHccC---CccccceeeecccCC
Q 002376 657 RRATGNFSHENLIGSGSFGSVLHNER-----T-------------GSWKSFIAECETLRNVR---HRNLVKLITSCSSLD 715 (929)
Q Consensus 657 ~~~~~~~~~~~~iG~G~~g~Vy~~~~-----~-------------~~~~~~~~E~~~l~~l~---Hpniv~l~~~~~~~~ 715 (929)
....++|...+.||+|+||.||+|.+ . ....++.+|++++++++ |+||+++++++...+
T Consensus 61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 34567899999999999999999942 1 23567889999999987 999999999986543
Q ss_pred CCCcceEEEEEEecCCCCcccccccc-------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC-----
Q 002376 716 SKNMEFLALVYEFLSNGSLGDWIHGE-------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE----- 777 (929)
Q Consensus 716 ~~~~~~~~lV~e~~~~gsL~~~l~~~-------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~----- 777 (929)
..++|||||++|+|.++++.. ..++.|++.||+|||+. +||||||||+|||++.
T Consensus 141 -----~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~ 212 (365)
T 3e7e_A 141 -----GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQ 212 (365)
T ss_dssp -----CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC
T ss_pred -----CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCc
Confidence 379999999999999998631 13467999999999998 9999999999999998
Q ss_pred ------CCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcC
Q 002376 778 ------EMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNL 851 (929)
Q Consensus 778 ------~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~ 851 (929)
++.+||+|||+|+.+... .........+||++|||||++.+..++.++||||+|+++|++.++..++...
T Consensus 213 ~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 288 (365)
T 3e7e_A 213 DDEDDLSAGLALIDLGQSIDMKLF----PKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKN 288 (365)
T ss_dssp ------CTTEEECCCTTCEEGGGS----CTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEE
T ss_pred cccccccCCEEEeeCchhhhhhcc----CCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccC
Confidence 899999999999865321 1112234467999999999999999999999999997776655544333211
Q ss_pred CchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCC-CCHHHHHHHHHhhHHHHh
Q 002376 852 PENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGR-IGIREALRRLKSSQEILL 918 (929)
Q Consensus 852 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~R-Ps~~ev~~~L~~~~~~~~ 918 (929)
... .......... ....+... +++..|++.+|.+| |+++++.+.|+++.+...
T Consensus 289 ~~~-~~~~~~~~~~---------~~~~~~~~----~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~ 342 (365)
T 3e7e_A 289 EGG-ECKPEGLFRR---------LPHLDMWN----EFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHY 342 (365)
T ss_dssp ETT-EEEECSCCTT---------CSSHHHHH----HHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred CCC-ceeechhccc---------cCcHHHHH----HHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhh
Confidence 110 0001111110 01112223 36669999999998 688899999998877643
No 190
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.97 E-value=5.8e-33 Score=306.42 Aligned_cols=247 Identities=24% Similarity=0.324 Sum_probs=176.5
Q ss_pred CCCCCceeecccCceeEEeccc----c----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 661 GNFSHENLIGSGSFGSVLHNER----T----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~----~----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
++|+..+.||+|+||.||++++ . ...+.|.+|++++++++||||+++++++...+ ..
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~ 117 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG---RR 117 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-------
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC---CC
Confidence 4688889999999999999873 1 12457899999999999999999999986532 23
Q ss_pred eEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..++||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~ 194 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKV 194 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred ceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence 4799999999999999987432 2367899999999998 999999999999999999999999999987
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhcc---------ChH
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVL---------DPE 862 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 862 (929)
...... .........|+..|+|||++.+..++.++||||+|++++++.....++...+....+.. ...
T Consensus 195 ~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 195 LPQDKE---YYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271 (326)
T ss_dssp CCSSCS---EEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHH
T ss_pred cccccc---ccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHH
Confidence 642211 00111234578889999999988899999999999888776554333221111111100 001
Q ss_pred HHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 863 LRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 863 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
+......... ...+...+..+.+++.+||+.||++|||++|++++|+++++.+.
T Consensus 272 ~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~ 325 (326)
T 2w1i_A 272 LIELLKNNGR--LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325 (326)
T ss_dssp HHHHHHTTCC--CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCC--CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 1111111000 00011112223337779999999999999999999999988753
No 191
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.97 E-value=5.4e-33 Score=310.11 Aligned_cols=251 Identities=12% Similarity=0.078 Sum_probs=177.8
Q ss_pred CCCCCceeecccCceeEEeccccCc-------------------HHHHHHHHHHHHccCCccccce--------------
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTGS-------------------WKSFIAECETLRNVRHRNLVKL-------------- 707 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~~-------------------~~~~~~E~~~l~~l~Hpniv~l-------------- 707 (929)
++|+..+.||+|+||.||+|+...+ .+.+.+|++++++++|||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTSTHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccchHHHHHHHHHHhcccchhhhhhhhccCCccCccc
Confidence 6899999999999999999976531 2358899999999999999984
Q ss_pred -eeecccCCCCCcceEEEEEEecCCCCcccccccc--c--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeec
Q 002376 708 -ITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE--R--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLD 776 (929)
Q Consensus 708 -~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~--~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~ 776 (929)
++++.. .....++||||+ +|+|.+++... . .++.|++.||+|||+. +|+||||||+||+++
T Consensus 122 ~~~~~~~----~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~~ 193 (352)
T 2jii_A 122 CMGFGVH----QDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFVD 193 (352)
T ss_dssp CCEEEEE----TTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEEE
T ss_pred hhhcccc----CCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEEc
Confidence 444432 234689999999 99999998753 1 2367899999999998 999999999999999
Q ss_pred CCC--ceEEeccccccccccccCCCC-CccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc
Q 002376 777 EEM--TAKVGDFGLARFLLERVDNQS-SISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE 853 (929)
Q Consensus 777 ~~~--~~ki~DfGla~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~ 853 (929)
.++ .+||+|||+++.+........ .........||+.|+|||++.+..++.++||||+|++++++.....++.....
T Consensus 194 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 273 (352)
T 2jii_A 194 PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLP 273 (352)
T ss_dssp TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Confidence 998 999999999987653322111 11112334799999999999999999999999999887776554444433221
Q ss_pred hhhhccChHHHHhhcccchhh--hhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhhc
Q 002376 854 NVLQVLDPELRQLMTSNESQT--IQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLKQ 920 (929)
Q Consensus 854 ~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~ 920 (929)
....+. .............. ......+...+.+++.+||+.||++||+++|++++|+++.+.....
T Consensus 274 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 341 (352)
T 2jii_A 274 NTEDIM-KQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVS 341 (352)
T ss_dssp CHHHHH-HHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHH-HHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCC
Confidence 111110 00110000000000 0000001122333777999999999999999999999998886544
No 192
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.97 E-value=2e-33 Score=311.56 Aligned_cols=231 Identities=23% Similarity=0.231 Sum_probs=167.2
Q ss_pred hCCCCCceeecccCceeEEeccccC------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcceEEEEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
.++|+..+.||+|+||+||+|+... ....+.+|++++.++ +||||+++++++.+ ....|+||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~-----~~~~~lv~ 95 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDD-----GKYVYVVT 95 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEEC-----SSEEEEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEc-----CCEEEEEE
Confidence 4578999999999999999987652 123456899999888 79999999999854 34589999
Q ss_pred EecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC----CceEEecccccccccc
Q 002376 727 EFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE----MTAKVGDFGLARFLLE 794 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~----~~~ki~DfGla~~~~~ 794 (929)
||+++|+|.+++.... .++.||+.||+|||+. +|+||||||+|||+.++ +.+||+|||+++....
T Consensus 96 E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 96 ELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp CCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 9999999999886443 3467899999999998 99999999999998433 3599999999986532
Q ss_pred ccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhcccchh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~ 873 (929)
.. ......+||+.|+|||++.+..++.++||||+|+++|++.....++...+. ...+++........ ..
T Consensus 173 ~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~----~~ 242 (342)
T 2qr7_A 173 EN------GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF----SL 242 (342)
T ss_dssp TT------CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCC----CC
T ss_pred CC------CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCc----cc
Confidence 21 112345789999999999888899999999999887776655444432221 11111111111111 00
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
....+..++..+++++.+|++.||++||+++|+++
T Consensus 243 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 243 SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp CSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00111112233344777999999999999999874
No 193
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.97 E-value=5.6e-33 Score=320.11 Aligned_cols=225 Identities=26% Similarity=0.286 Sum_probs=161.0
Q ss_pred hCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.++|+..+.||+|+||.||+|+... ..+.+.+|+++++.++||||++++++|... .
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~-----~ 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH-----D 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEET-----T
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeC-----C
Confidence 4679999999999999999887541 124567899999999999999999999543 3
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhh-CCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHN-DCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~-~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..++||||+++|+|.+++...+ .++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+|+.
T Consensus 222 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~ 298 (446)
T 4ejn_A 222 RLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKE 298 (446)
T ss_dssp EEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred EEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCcee
Confidence 4899999999999999886432 346799999999998 6 899999999999999999999999999985
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
.... .......+||++|||||++.+..++.++||||+|++++++.....++..... .+........ ..
T Consensus 299 ~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~----~~ 366 (446)
T 4ejn_A 299 GIKD------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILME----EI 366 (446)
T ss_dssp TCC-----------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHC----CC
T ss_pred ccCC------CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--HHHHHHHHhC----CC
Confidence 4211 1123346899999999999999999999999999877776554444322211 1111111111 11
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRI-----GIREALR 908 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 908 (929)
..... +...+.+++.+||+.||++|| +++|+++
T Consensus 367 ~~p~~----~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 367 RFPRT----LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CCCTT----SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCCcc----CCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 11111 122233477799999999999 9999985
No 194
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=6.4e-33 Score=313.83 Aligned_cols=183 Identities=23% Similarity=0.338 Sum_probs=136.0
Q ss_pred hhCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccC-CccccceeeecccCCCCCc
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~ 719 (929)
..++|+..+.||+|+||.||+|.+.. ..+.+.+|+.+++++. |||||++++++...+ .
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~---~ 83 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADN---D 83 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTT---S
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCC---C
Confidence 45789999999999999999986541 2356779999999997 999999999986532 2
Q ss_pred ceEEEEEEecCCCCcccccccc-------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGE-------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~-------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
...|+|||||+ |+|.++++.. +.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.+
T Consensus 84 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 84 RDVYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp SCEEEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred CEEEEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 35899999997 6898887642 23467999999999998 9999999999999999999999999999865
Q ss_pred ccccCCC---------------CCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 793 LERVDNQ---------------SSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 793 ~~~~~~~---------------~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
....... .........+||+.|+|||++.+ ..++.++||||+|++++++..+..++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf 231 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCC
Confidence 3211100 01112344689999999999987 57899999999998888766554433
No 195
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.97 E-value=3e-32 Score=313.89 Aligned_cols=224 Identities=25% Similarity=0.299 Sum_probs=168.1
Q ss_pred hCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.++|...+.||+|+||+||+|++.. ..+.+.+|+++++.++||||+++++++... .
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~-----~ 89 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTP-----S 89 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----S
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-----C
Confidence 3578899999999999999987641 134688999999999999999999998543 3
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
..|+||||+++|+|.+++.... .++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 90 ~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~ 166 (476)
T 2y94_A 90 DIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMM 166 (476)
T ss_dssp EEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhc
Confidence 4899999999999999986432 3467999999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCC-CCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERP-STAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
... ......+||+.|+|||++.+..+ +.++||||+|++++++..+..++.... ..+... .+.. ...
T Consensus 167 ~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~--~~~~~~-~i~~---~~~ 233 (476)
T 2y94_A 167 SDG-------EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH--VPTLFK-KICD---GIF 233 (476)
T ss_dssp CTT-------CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS--SHHHHH-HHHT---TCC
T ss_pred ccc-------ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC--HHHHHH-HHhc---CCc
Confidence 321 11234579999999999998875 789999999987777654433332111 111110 1111 000
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..... +..-+.+++.+||+.||++|||++|+++
T Consensus 234 ~~p~~----~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 234 YTPQY----LNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp CCCTT----CCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCcc----CCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 00111 1122233777999999999999999986
No 196
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.97 E-value=6.1e-32 Score=308.38 Aligned_cols=229 Identities=22% Similarity=0.237 Sum_probs=159.8
Q ss_pred hhCCCCCceeecccCceeEEeccccCc------------------------HHHHHHHHHHHHccCCccccceeeecccC
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTGS------------------------WKSFIAECETLRNVRHRNLVKLITSCSSL 714 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~------------------------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~ 714 (929)
..++|...+.||+|+||.||+|..... ...+.+|++++++++|||||++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 457899999999999999999865411 1247899999999999999999999732
Q ss_pred CCCCcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC---CceEE
Q 002376 715 DSKNMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE---MTAKV 783 (929)
Q Consensus 715 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~---~~~ki 783 (929)
...++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||++.+ +.+||
T Consensus 212 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 212 -----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp -----SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred -----CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEE
Confidence 23699999999999999886433 2367999999999998 99999999999999654 45999
Q ss_pred eccccccccccccCCCCCccccceeccccccccccccCC---CCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccC
Q 002376 784 GDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG---ERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLD 860 (929)
Q Consensus 784 ~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (929)
+|||+|+..... ......+||+.|+|||++.+ ..++.++||||+|++++++.....++...... ..+.
T Consensus 284 ~DFG~a~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~--~~~~ 354 (419)
T 3i6u_A 284 TDFGHSKILGET-------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--VSLK 354 (419)
T ss_dssp CCSSTTTSCC------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS--CCHH
T ss_pred eecccceecCCC-------ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch--HHHH
Confidence 999999875321 12234679999999999864 56889999999998777765544443322110 0000
Q ss_pred hHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 861 PELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 861 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..+.. .........+..+...+.+++.+|++.||++|||++|+++
T Consensus 355 ~~i~~---~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 355 DQITS---GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHHHT---TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHhc---CCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 11111 0000011111112223334777999999999999999986
No 197
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.97 E-value=3.5e-32 Score=290.98 Aligned_cols=233 Identities=27% Similarity=0.341 Sum_probs=173.5
Q ss_pred CCCCCceeecccCceeEEecccc--------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT--------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~--------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
++|+..+.||+|+||.||++.+. ...+++.+|++++++++||||+++++++...+ ..++||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~ 82 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA-----PICLVT 82 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-----SCEEEE
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-----CeEEEE
Confidence 57888899999999999998764 13468999999999999999999999986533 379999
Q ss_pred EecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 727 EFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
||+++|+|.++++..+ .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 83 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~- 158 (267)
T 3t9t_A 83 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ- 158 (267)
T ss_dssp CCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-
T ss_pred eCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccc-
Confidence 9999999999986432 2357899999999998 99999999999999999999999999998653211
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTIQ 876 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 876 (929)
........||+.|+|||++.+..++.++||||+|++++++.. ...++..... .+.. ..+...... .....
T Consensus 159 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~-~~i~~~~~~--~~~~~ 229 (267)
T 3t9t_A 159 ----YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--SEVV-EDISTGFRL--YKPRL 229 (267)
T ss_dssp ----HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHH-HHHHTTCCC--CCCTT
T ss_pred ----ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH--HHHH-HHHhcCCcC--CCCcc
Confidence 111123457889999999998899999999999977666543 2322221111 1111 111110000 00011
Q ss_pred hhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHH
Q 002376 877 LHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQE 915 (929)
Q Consensus 877 ~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~ 915 (929)
....+.+++.+||+.||++||+++|+++.|+++.+
T Consensus 230 ----~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 230 ----ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11223337779999999999999999999999876
No 198
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.97 E-value=4.9e-32 Score=307.06 Aligned_cols=235 Identities=19% Similarity=0.152 Sum_probs=161.2
Q ss_pred CCCCCc-eeecccCceeEEeccccC-----------cHHHHHHHHHHHHc-cCCccccceeeecccCCCCCcceEEEEEE
Q 002376 661 GNFSHE-NLIGSGSFGSVLHNERTG-----------SWKSFIAECETLRN-VRHRNLVKLITSCSSLDSKNMEFLALVYE 727 (929)
Q Consensus 661 ~~~~~~-~~iG~G~~g~Vy~~~~~~-----------~~~~~~~E~~~l~~-l~Hpniv~l~~~~~~~~~~~~~~~~lV~e 727 (929)
++|... ++||+|+||+||++.+.. ....+.+|+.++.+ .+||||+++++++.... .+....|+|||
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~-~~~~~~~lv~E 139 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLY-AGRKCLLIVME 139 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEEEEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcchhHHHHHHHHHHhcCCCCcceEeEEEeecc-cCCcEEEEEEE
Confidence 456665 689999999999997652 23567889998754 58999999999885321 12456899999
Q ss_pred ecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC---CCceEEecccccccccc
Q 002376 728 FLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE---EMTAKVGDFGLARFLLE 794 (929)
Q Consensus 728 ~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~---~~~~ki~DfGla~~~~~ 794 (929)
||++|+|.+++.... .++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 140 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~ 216 (400)
T 1nxk_A 140 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 216 (400)
T ss_dssp CCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-
T ss_pred eCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCC
Confidence 999999999987432 2367899999999998 9999999999999997 78999999999986532
Q ss_pred ccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQT 874 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 874 (929)
. ......+||+.|||||++.+..++.++||||+|+++|++..+..++..... ...................
T Consensus 217 ~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~~~~~i~~~~~~~~ 287 (400)
T 1nxk_A 217 H-------NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG--LAISPGMKTRIRMGQYEFP 287 (400)
T ss_dssp -----------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTT--CSSCCSHHHHHHHTCCCCC
T ss_pred C-------CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcc--ccccHHHHHHHHcCcccCC
Confidence 1 122345799999999999999999999999999877776554443322111 0100001111000000000
Q ss_pred hhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 875 IQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 875 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
...+..+...+.+++.+||+.||++|||++|+++
T Consensus 288 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 288 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000112222334777999999999999999986
No 199
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.97 E-value=3.2e-32 Score=293.29 Aligned_cols=232 Identities=25% Similarity=0.319 Sum_probs=167.5
Q ss_pred hCCCCCceeecccCceeEEeccccC------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVYE 727 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~e 727 (929)
.++|+..+.||+|+||.||+++..+ ..+.|.+|++++++++||||+++++++...+ ...++|||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~~lv~e 95 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK----GGLYIVTE 95 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC------CCEEEEC
T ss_pred hhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC----CceEEEEe
Confidence 4578899999999999999987652 3567999999999999999999999975432 24799999
Q ss_pred ecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccC
Q 002376 728 FLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVD 797 (929)
Q Consensus 728 ~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 797 (929)
|+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-- 170 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 170 (278)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc--
Confidence 999999999986432 3367899999999998 9999999999999999999999999999854211
Q ss_pred CCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhhh
Q 002376 798 NQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTIQ 876 (929)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 876 (929)
.....+++.|+|||++.+..++.++||||+|++++++.. ...++...+. .+.. ..+..... ......
T Consensus 171 -------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--~~~~-~~~~~~~~--~~~~~~ 238 (278)
T 1byg_A 171 -------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVV-PRVEKGYK--MDAPDG 238 (278)
T ss_dssp ------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG--GGHH-HHHTTTCC--CCCCTT
T ss_pred -------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHHH-HHHhcCCC--CCCccc
Confidence 122357889999999999999999999999987766543 3322222211 1110 11110000 000111
Q ss_pred hhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 877 LHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 877 ~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
. +..+.+++.+||+.||++||+++|+++.|+++...
T Consensus 239 ~----~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 239 C----PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp C----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C----CHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 1 12223377799999999999999999999998764
No 200
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.97 E-value=8.9e-33 Score=299.28 Aligned_cols=172 Identities=27% Similarity=0.386 Sum_probs=137.5
Q ss_pred CCCCCceeecccCceeEEecccc-----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT-----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~-----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
++|+..+.||+|+||.||+|+.. ...+.+.+|++++++++||||+++++++... ...+
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 76 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK-----KRLV 76 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECS-----SCEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccC-----CeEE
Confidence 57888999999999999998754 1135788999999999999999999998643 3489
Q ss_pred EEEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
+||||+++ +|.+++... ..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 77 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 152 (288)
T 1ob3_A 77 LVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGI 152 (288)
T ss_dssp EEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC
T ss_pred EEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCc
Confidence 99999975 888877532 13467999999999998 999999999999999999999999999986532
Q ss_pred ccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWV 847 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~ 847 (929)
. ........||+.|+|||++.+. .++.++||||+|++++++.....+
T Consensus 153 ~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p 200 (288)
T 1ob3_A 153 P------VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPL 200 (288)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred c------ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 1 1112334789999999998764 589999999999887776554433
No 201
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.97 E-value=2.1e-32 Score=295.53 Aligned_cols=237 Identities=24% Similarity=0.321 Sum_probs=173.3
Q ss_pred hCCCCCceeecccCceeEEeccccC------------cHHHHHHHHHHHHccCCccccceeeecccCCC-----------
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS----------- 716 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~----------- 716 (929)
.++|+..+.||+|+||.||+|+... ..+.+.+|++++++++||||+++++++.....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~ 89 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSR 89 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------C
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccc
Confidence 3578889999999999999997651 23578899999999999999999998753110
Q ss_pred CCcceEEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecc
Q 002376 717 KNMEFLALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDF 786 (929)
Q Consensus 717 ~~~~~~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~Df 786 (929)
......++||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 166 (284)
T 2a19_B 90 SKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDF 166 (284)
T ss_dssp CEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCC
T ss_pred cCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCEEECcc
Confidence 12345799999999999999986431 2357899999999998 9999999999999999999999999
Q ss_pred ccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHH
Q 002376 787 GLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQ 865 (929)
Q Consensus 787 Gla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~ 865 (929)
|+++...... ......||+.|+|||++.+..++.++||||+|++++++.. +..+. ...+.. ..+..
T Consensus 167 g~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-----~~~~~~~~~~~~-~~~~~ 233 (284)
T 2a19_B 167 GLVTSLKNDG-------KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH-----VCDTAFETSKFF-TDLRD 233 (284)
T ss_dssp TTCEESSCCS-------CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHS-----CCSSHHHHHHHH-HHHHT
T ss_pred hhheeccccc-------cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHh-----cCCcchhHHHHH-HHhhc
Confidence 9998663221 1223468999999999999999999999999977666432 22222 111100 01111
Q ss_pred hhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhhcc
Q 002376 866 LMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLKQQ 921 (929)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~ 921 (929)
.. .... +...+++++.+||+.||++|||+.|+++.|+.+.......+
T Consensus 234 ----~~-~~~~----~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~~ 280 (284)
T 2a19_B 234 ----GI-ISDI----FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNE 280 (284)
T ss_dssp ----TC-CCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC------
T ss_pred ----cc-cccc----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCccc
Confidence 00 0011 11222347779999999999999999999999876655443
No 202
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.97 E-value=3.9e-32 Score=293.32 Aligned_cols=234 Identities=21% Similarity=0.265 Sum_probs=169.7
Q ss_pred CCCCCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCC
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 718 (929)
++|+..+.||+|+||.||+++... ..+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---- 80 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENK---- 80 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS----
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCC----
Confidence 468889999999999999986541 256799999999999999999999998543
Q ss_pred cceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC----ceEEecc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM----TAKVGDF 786 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~----~~ki~Df 786 (929)
...++||||+++++|.+++.... .++.|++.||+|||+. +|+||||||+||++++++ .+||+||
T Consensus 81 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~df 156 (283)
T 3bhy_A 81 -TDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDF 156 (283)
T ss_dssp -SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred -CeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEec
Confidence 34899999999999999986432 3467899999999998 999999999999998877 8999999
Q ss_pred ccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHh
Q 002376 787 GLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQL 866 (929)
Q Consensus 787 Gla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 866 (929)
|+++..... .......||+.|+|||++.+..++.++||||+|++++++.....++..... .+. ....
T Consensus 157 g~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~----~~~~ 223 (283)
T 3bhy_A 157 GIAHKIEAG-------NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK--QET----LTNI 223 (283)
T ss_dssp TTCEECC---------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH--HHH----HHHH
T ss_pred ccceeccCC-------CcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch--HHH----HHHh
Confidence 999865321 112334689999999999999999999999999877765544433322211 000 0000
Q ss_pred hcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHHhhHH
Q 002376 867 MTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR--RLKSSQE 915 (929)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~--~L~~~~~ 915 (929)
..................+.+++.+||+.||++||+++|+++ .++++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 274 (283)
T 3bhy_A 224 SAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274 (283)
T ss_dssp HTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred HhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence 000000001111111223334777999999999999999986 4555543
No 203
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.97 E-value=3.9e-32 Score=292.58 Aligned_cols=225 Identities=21% Similarity=0.291 Sum_probs=147.4
Q ss_pred hCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.++|+..+.||+|+||.||+|+... ..+.+.+|++++++++||||+++++++.. ..
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 84 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED-----SN 84 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC-----SS
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc-----CC
Confidence 4578899999999999999997531 13568899999999999999999999854 33
Q ss_pred eEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 161 (278)
T 3cok_A 85 YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQ 161 (278)
T ss_dssp EEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceee
Confidence 5899999999999999886432 2367899999999998 999999999999999999999999999986
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
..... .......||+.|+|||++.+..++.++||||+|++++++.....++..... .+. +........
T Consensus 162 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~----~~~~~~~~~ 229 (278)
T 3cok_A 162 LKMPH------EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTV--KNT----LNKVVLADY 229 (278)
T ss_dssp CC----------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSC--C---------CCSSCC
T ss_pred ccCCC------CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhH--HHH----HHHHhhccc
Confidence 53211 112235789999999999999999999999999877765544333322111 111 111000010
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..... +...+.+++.+||+.||++|||++|+++
T Consensus 230 ~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 230 EMPSF----LSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CCCTT----SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCccc----cCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 00111 1122233777999999999999999975
No 204
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.97 E-value=2.9e-32 Score=294.59 Aligned_cols=223 Identities=20% Similarity=0.274 Sum_probs=167.9
Q ss_pred hCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.++|+..+.||+|+||.||+|+... ..+.+.+|++++++++||||+++++++.+. .
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 87 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDR-----K 87 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----S
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcC-----C
Confidence 3578899999999999999987641 135688999999999999999999998543 3
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
..++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~ 164 (284)
T 2vgo_A 88 RIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHA 164 (284)
T ss_dssp EEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccC
Confidence 5899999999999999886432 3467899999999998 9999999999999999999999999998754
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
... ......||+.|+|||++.+..++.++||||+|++++++.....++..... .+. ..........
T Consensus 165 ~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~----~~~~~~~~~~ 230 (284)
T 2vgo_A 165 PSL--------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH--TET----HRRIVNVDLK 230 (284)
T ss_dssp SSS--------CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--HHH----HHHHHTTCCC
T ss_pred ccc--------ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH--hHH----HHHHhccccC
Confidence 211 12335789999999999999999999999999877765544333322111 000 0111111111
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.... +...+++++.+|++.||++||+++|+++
T Consensus 231 ~~~~----~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 231 FPPF----LSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp CCTT----SCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCc----CCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 1111 1222334777999999999999999986
No 205
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.97 E-value=1.6e-32 Score=307.44 Aligned_cols=182 Identities=26% Similarity=0.330 Sum_probs=149.8
Q ss_pred CCCChHHHHHhhCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHccC-----Ccccccee
Q 002376 649 PKISYDELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNVR-----HRNLVKLI 708 (929)
Q Consensus 649 ~~~~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l~-----Hpniv~l~ 708 (929)
..+++++.....++|+..++||+|+||.||+|++.. ..+.+..|+.++++++ |||||+++
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~ 102 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYH 102 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence 345666666677899999999999999999988741 1356778999999996 99999999
Q ss_pred eecccCCCCCcceEEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC-
Q 002376 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE- 777 (929)
Q Consensus 709 ~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~- 777 (929)
+++... ...++||||+ +|+|.+++.... .++.|++.||+|||+. +|+||||||+|||+++
T Consensus 103 ~~~~~~-----~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~ 173 (360)
T 3llt_A 103 GKFMYY-----DHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDP 173 (360)
T ss_dssp EEEEET-----TEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCT
T ss_pred ceeeEC-----CeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccc
Confidence 998653 3489999999 899999886432 2367899999999998 9999999999999975
Q ss_pred ------------------------CCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCC
Q 002376 778 ------------------------EMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPT 833 (929)
Q Consensus 778 ------------------------~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s 833 (929)
++.+||+|||+|+.... ......||+.|+|||++.+..++.++||||
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~Diws 244 (360)
T 3llt_A 174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD---------YHGSIINTRQYRAPEVILNLGWDVSSDMWS 244 (360)
T ss_dssp TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS---------CCCSCCSCGGGCCHHHHTTCCCCTTHHHHH
T ss_pred cccccccchhcccccccccccccCCCCEEEEeccCceecCC---------CCcCccCcccccCcHHHcCCCCCCccchHH
Confidence 78999999999986421 112357899999999999999999999999
Q ss_pred CcCCCCCcchhHHhh
Q 002376 834 SESFAGEFNIVKWVE 848 (929)
Q Consensus 834 ~g~~~~~~~~~~~~~ 848 (929)
+|++++++.....++
T Consensus 245 lG~il~ell~g~~pf 259 (360)
T 3llt_A 245 FGCVLAELYTGSLLF 259 (360)
T ss_dssp HHHHHHHHHHSSCSC
T ss_pred HHHHHHHHHHCCCCC
Confidence 998877765554443
No 206
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=2.5e-33 Score=335.87 Aligned_cols=455 Identities=14% Similarity=0.081 Sum_probs=280.1
Q ss_pred CCCCCcceeeCCCCCcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCC---CCCCCcCCC------------CCCCC
Q 002376 57 SPCTWPGVICNNFGNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKL---SGNLPREIG------------NLFRL 121 (929)
Q Consensus 57 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l---~~~~p~~~~------------~l~~L 121 (929)
-|++|.++.+... + .+.+.+ .....++..+..+++|++|+|+++.. .+.+|..++ .+++|
T Consensus 40 vck~W~~~~~~~~--~--~l~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L 114 (592)
T 3ogk_B 40 VCRRWFKIDSETR--E--HVTMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQL 114 (592)
T ss_dssp SCHHHHHHHHHHC--C--EEEESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HhHHHHHhhhccc--c--EEEEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCC
Confidence 3558999865321 2 222322 23333444566788999999998643 245666555 78999
Q ss_pred cEEeCCCCCCCCCcccccccc--cccceecccccc-cCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCC
Q 002376 122 RVLNISFNNLQGELPVNISKL--TELKMLDLMANK-ITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSR 198 (929)
Q Consensus 122 ~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls~N~-l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~ 198 (929)
++|+|++|.+++..+..+... .+|++|+|++|. ++..-......++++|++|+|++|.+++.-+.++ +..+..
T Consensus 115 ~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l----~~~~~~ 190 (592)
T 3ogk_B 115 KSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWL----HELAQH 190 (592)
T ss_dssp CEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHH----HHHHHH
T ss_pred CeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHH----HHHHhc
Confidence 999999999988777777764 459999999987 2210011223478999999999998865432222 223456
Q ss_pred CCcccEEEeecccCCC----ccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCC---CCCCCcccc
Q 002376 199 LENLKVLDLTINRLAG----TVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFT---GKIPGSLHN 271 (929)
Q Consensus 199 l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~---~~~p~~~~~ 271 (929)
+++|+.|+|++|.+++ .++..+.++++|++|+|++|.+.+ +|..+ ..+++|++|.++..... +..+..+..
T Consensus 191 ~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~-~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 268 (592)
T 3ogk_B 191 NTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFF-KAAANLEEFCGGSLNEDIGMPEKYMNLVF 268 (592)
T ss_dssp CCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHH-HHCTTCCEEEECBCCCCTTCTTSSSCCCC
T ss_pred CCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHH-hhhhHHHhhcccccccccchHHHHHHhhc
Confidence 7899999999999973 345556788999999999998874 66444 44888888888753322 344566777
Q ss_pred cccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccc-cCchhhh
Q 002376 272 LTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGK-IPESIGN 350 (929)
Q Consensus 272 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~ 350 (929)
+++|+.|+++++.. +.+|..+..+++|++|++++|.+.... ....+..+++|++|+++ |.+... ++.....
T Consensus 269 ~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~------~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~ 340 (592)
T 3ogk_B 269 PRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETED------HCTLIQKCPNLEVLETR-NVIGDRGLEVLAQY 340 (592)
T ss_dssp CTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHH------HHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHH
T ss_pred cccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHH------HHHHHHhCcCCCEEecc-CccCHHHHHHHHHh
Confidence 88888888887533 356777777888888888877753211 11224667778888877 444332 2222233
Q ss_pred ccccccEEEec-----------CCcccccc-CCCCCCCCcccEEEeeCCCCCcccCccccC-CCCCCEEEec----CCcC
Q 002376 351 FSNELSKLYLG-----------GNHIYGKI-PASIGRLRSLTLLDLSYNSISGEIPIEIGQ-LQGLQVLGLA----GNEI 413 (929)
Q Consensus 351 ~~~~L~~L~Ls-----------~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~----~N~l 413 (929)
++ +|++|+|+ .|.+++.. +..+..+++|++|+++.|++++..+..+.. +++|+.|+++ .|.+
T Consensus 341 ~~-~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l 419 (592)
T 3ogk_B 341 CK-QLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERI 419 (592)
T ss_dssp CT-TCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCC
T ss_pred CC-CCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccc
Confidence 43 67777777 35555331 222334677777777777777666555554 6777777775 5666
Q ss_pred CCC-----CcccccCCCCCceecccCc--ccccccCccccc-ccccceecccCCcCCCCCCCCcccCCchhhhcccCccE
Q 002376 414 PGG-----IPNSLANLKKLNQIDLSGN--ELTGEIPISFGN-FQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVT 485 (929)
Q Consensus 414 ~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~~-l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~ 485 (929)
++. ++..+.++++|++|+|++| .+++..+..+.. +++|+.|++++|++++.. ++..+..+++|+.
T Consensus 420 ~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~-------~~~~~~~~~~L~~ 492 (592)
T 3ogk_B 420 TDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEG-------LMEFSRGCPNLQK 492 (592)
T ss_dssp SSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHH-------HHHHHTCCTTCCE
T ss_pred cCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHH-------HHHHHhcCcccCe
Confidence 653 3334555667777777533 244443333332 566666666666665311 1333455566666
Q ss_pred EEecCCCCCCC-CCcchhcCcCcceeecccccccccCCccc-cCCCCCCEEECCC
Q 002376 486 IDLSDNSLSGN-LPNSLKNCKSLEELLMAYNQFSGPIPNIV-AELKGLEVLDLSS 538 (929)
Q Consensus 486 LdLs~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~ 538 (929)
|+|++|.+++. ++..+..+++|++|+|++|+++..--..+ ..++.+....+..
T Consensus 493 L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~ 547 (592)
T 3ogk_B 493 LEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPS 547 (592)
T ss_dssp EEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECC
T ss_pred eeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecC
Confidence 66666665433 23333456666666666666654322222 2345554444443
No 207
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.97 E-value=5.5e-33 Score=301.30 Aligned_cols=238 Identities=22% Similarity=0.246 Sum_probs=165.7
Q ss_pred hCCCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSK 717 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 717 (929)
.++|+..+.||+|+||.||+|++. ...+.+.+|++++++++||||+++++++....
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 94 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-- 94 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC--
Confidence 357888999999999999998642 01356889999999999999999999986432
Q ss_pred CcceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccc
Q 002376 718 NMEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788 (929)
Q Consensus 718 ~~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGl 788 (929)
.++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 95 ----~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~ 167 (291)
T 1u46_A 95 ----MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGL 167 (291)
T ss_dssp ----CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred ----ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccc
Confidence 689999999999999886432 2367899999999998 999999999999999999999999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhh
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLM 867 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~ 867 (929)
++....... .........||+.|+|||++.+..++.++||||+|++++++.. ...++..... . ......
T Consensus 168 ~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~-----~~~~~~ 237 (291)
T 1u46_A 168 MRALPQNDD---HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG--S-----QILHKI 237 (291)
T ss_dssp CEECCC-CC---EEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH--H-----HHHHHH
T ss_pred ccccccccc---chhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH--H-----HHHHHH
Confidence 987642211 1111233467889999999998889999999999977766544 3333222211 1 111111
Q ss_pred cccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 868 TSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
...... .......+..+.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 238 ~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 238 DKEGER-LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp HTSCCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred HccCCC-CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 000000 0000111222333777999999999999999999999876543
No 208
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.97 E-value=8.6e-32 Score=321.85 Aligned_cols=230 Identities=20% Similarity=0.228 Sum_probs=165.9
Q ss_pred eeecccCceeEEecccc--------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 667 NLIGSGSFGSVLHNERT--------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 667 ~~iG~G~~g~Vy~~~~~--------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
+.||+|+||+||+|.+. ...++|.+|++++++++|||||+++++|... ..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE------SWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS------SEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC------CEEEEE
Confidence 47999999999998432 1246899999999999999999999998431 278999
Q ss_pred EecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCC
Q 002376 727 EFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDN 798 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 798 (929)
|||++|+|.++++..+ .++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+.+.....
T Consensus 449 E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~- 524 (635)
T 4fl3_A 449 EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN- 524 (635)
T ss_dssp ECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred EccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc-
Confidence 9999999999987433 3467999999999998 999999999999999999999999999987643211
Q ss_pred CCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccchhhhhh
Q 002376 799 QSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNESQTIQL 877 (929)
Q Consensus 799 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 877 (929)
.........||+.|+|||++.+..++.++||||+|++++++.. ...++..... . .+......... ...
T Consensus 525 --~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~-----~~~~~i~~~~~--~~~ 593 (635)
T 4fl3_A 525 --YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--S-----EVTAMLEKGER--MGC 593 (635)
T ss_dssp ------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--H-----HHHHHHHTTCC--CCC
T ss_pred --ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--H-----HHHHHHHcCCC--CCC
Confidence 1112233457889999999999999999999999987776543 3333322221 1 11111111100 000
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 878 HDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 878 ~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
+...+.-+.+++.+||+.||++||++++|+++|+++....
T Consensus 594 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 594 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 0111122233777999999999999999999999987654
No 209
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.97 E-value=1.4e-32 Score=304.17 Aligned_cols=219 Identities=21% Similarity=0.283 Sum_probs=165.9
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------------cHHHHHHHHHHHHccCCccccceeeecccCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLD 715 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~ 715 (929)
.++|+..+.||+|+||.||+|++.. ..+.+.+|+.++++++||||+++++++..
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~-- 100 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN-- 100 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC--
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee--
Confidence 4578999999999999999996541 12356789999999999999999999854
Q ss_pred CCCcceEEEEEEecCCC-Cccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecc
Q 002376 716 SKNMEFLALVYEFLSNG-SLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDF 786 (929)
Q Consensus 716 ~~~~~~~~lV~e~~~~g-sL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~Df 786 (929)
....++||||+.+| +|.+++.... .++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 101 ---~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 101 ---QGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp ---SSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred ---CCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeec
Confidence 34589999999777 9998886443 3467999999999998 9999999999999999999999999
Q ss_pred ccccccccccCCCCCccccceeccccccccccccCCCCC-CCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHH
Q 002376 787 GLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERP-STAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQ 865 (929)
Q Consensus 787 Gla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 865 (929)
|+++..... ......+||+.|+|||++.+..+ +.++||||+|++++++.....++.. ..+.......
T Consensus 175 g~a~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~----~~~~~~~~~~- 242 (335)
T 3dls_A 175 GSAAYLERG-------KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE----LEETVEAAIH- 242 (335)
T ss_dssp TTCEECCTT-------CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS----GGGGTTTCCC-
T ss_pred ccceECCCC-------CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh----HHHHHhhccC-
Confidence 999865321 12234579999999999988886 8899999999776665443333221 1111111110
Q ss_pred hhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 002376 866 LMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRR 909 (929)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 909 (929)
.....++. +.+++.+||+.||++|||++|+++.
T Consensus 243 -------~~~~~~~~----l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 243 -------PPYLVSKE----LMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -------CSSCCCHH----HHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -------CCcccCHH----HHHHHHHHccCChhhCcCHHHHhcC
Confidence 00011122 2337779999999999999999874
No 210
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.97 E-value=9.5e-33 Score=306.96 Aligned_cols=221 Identities=27% Similarity=0.317 Sum_probs=162.1
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
+.|+..+.||+|+||.||+|+... ..+++.+|++++++++|||||++++++... ..
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~ 128 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE-----HT 128 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-----Ce
Confidence 357888999999999999987531 125688999999999999999999998643 34
Q ss_pred EEEEEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.++||||++ |++.+++... ..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 129 ~~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 204 (348)
T 1u5q_A 129 AWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIM 204 (348)
T ss_dssp EEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSS
T ss_pred EEEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceec
Confidence 899999997 6887777422 13467899999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccC---CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGL---GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTS 869 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 869 (929)
.. .....||+.|+|||++. ++.++.++||||+|++++++.....++..... .+.+. .+......
T Consensus 205 ~~----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~--~~~~~-~~~~~~~~ 271 (348)
T 1u5q_A 205 AP----------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MSALY-HIAQNESP 271 (348)
T ss_dssp SS----------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHH-HHHHSCCC
T ss_pred CC----------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--HHHHH-HHHhcCCC
Confidence 21 12357999999999984 56789999999999877776554433322211 01000 01110000
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
...... ....+++++.+||+.||++|||++|+++
T Consensus 272 -~~~~~~----~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 272 -ALQSGH----WSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp -CCCCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -CCCCCC----CCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 000011 1222334777999999999999999874
No 211
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.97 E-value=5.4e-32 Score=298.81 Aligned_cols=231 Identities=24% Similarity=0.322 Sum_probs=171.2
Q ss_pred CCCCCceeecccCceeEEecccc-------------------CcHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcc
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~ 720 (929)
++|+..+.||+|+||.||+|+.. ...+.+.+|+++++++ +||||+++++++... .
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~-----~ 99 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR-----G 99 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEET-----T
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeC-----C
Confidence 57888999999999999998653 1235688999999999 899999999998543 3
Q ss_pred eEEEEEEecCCCCccccccccc------------------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeec
Q 002376 721 FLALVYEFLSNGSLGDWIHGER------------------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLD 776 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~------------------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~ 776 (929)
..++||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+||+++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~ 176 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVG 176 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEc
Confidence 5899999999999999986432 2357899999999998 999999999999999
Q ss_pred CCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchh
Q 002376 777 EEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENV 855 (929)
Q Consensus 777 ~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~ 855 (929)
.++.+||+|||+++..... .......+++.|+|||++.+..++.++||||+|++++++.. ...++.....
T Consensus 177 ~~~~~kL~Dfg~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-- 247 (327)
T 1fvr_A 177 ENYVAKIADFGLSRGQEVY-------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-- 247 (327)
T ss_dssp GGGCEEECCTTCEESSCEE-------CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH--
T ss_pred CCCeEEEcccCcCcccccc-------ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH--
Confidence 9999999999999743211 11223357889999999988889999999999987776543 3333322211
Q ss_pred hhccChHHHHhhccc--chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 856 LQVLDPELRQLMTSN--ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 856 ~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
. .+....... .......++ .+.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 248 ~-----~~~~~~~~~~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 248 A-----ELYEKLPQGYRLEKPLNCDD----EVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp H-----HHHHHGGGTCCCCCCTTBCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred H-----HHHHHhhcCCCCCCCCCCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 1 111111110 001111112 2233777999999999999999999999987754
No 212
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.97 E-value=1.5e-31 Score=287.76 Aligned_cols=227 Identities=25% Similarity=0.248 Sum_probs=166.6
Q ss_pred hCCCCCceeecccCceeEEecccc----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
.++|+..+.||+|+||.||+|... ...+.+.+|++++++++||||+++++++... ...+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 82 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDN-----TDIY 82 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----SEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC-----CeEE
Confidence 357888999999999999998764 2356899999999999999999999998543 3489
Q ss_pred EEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeee---cCCCceEEecccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILL---DEEMTAKVGDFGLARFL 792 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl---~~~~~~ki~DfGla~~~ 792 (929)
+||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++..
T Consensus 83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 83 LVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp EEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 9999999999998876432 3467899999999998 99999999999999 78899999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
... .......||+.|+|||++.+. ++.++||||+|++++++.....++..... .+... .+.. ....
T Consensus 160 ~~~-------~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~-~~~~---~~~~ 225 (277)
T 3f3z_A 160 KPG-------KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTD--SEVML-KIRE---GTFT 225 (277)
T ss_dssp CTT-------SCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHH-HHHH---CCCC
T ss_pred cCc-------cchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCH--HHHHH-HHHh---CCCC
Confidence 321 112334799999999998654 99999999999777665544333322211 11111 1111 0000
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
........+...+.+++.+|++.||++|||+.|+++
T Consensus 226 ~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 226 FPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000011222334777999999999999999975
No 213
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.97 E-value=3.3e-32 Score=296.76 Aligned_cols=237 Identities=25% Similarity=0.352 Sum_probs=163.2
Q ss_pred hCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHccCCccccceeeecccCCC--------
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS-------- 716 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-------- 716 (929)
.++|+..+.||+|+||.||+|+... ..+.+.+|+.++++++||||+++++++.+...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 4578899999999999999997541 24578899999999999999999998865321
Q ss_pred CCcceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccc
Q 002376 717 KNMEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFG 787 (929)
Q Consensus 717 ~~~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfG 787 (929)
......++||||+++|+|.++++... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg 161 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFG 161 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEeeCc
Confidence 22456899999999999999986322 2367899999999998 99999999999999999999999999
Q ss_pred cccccccccCCC--------CCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhh
Q 002376 788 LARFLLERVDNQ--------SSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQ 857 (929)
Q Consensus 788 la~~~~~~~~~~--------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~ 857 (929)
+++......... ..........||+.|+|||++.+. .++.++||||+|++++++.. +..+. ...+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-----p~~~~~~~~~ 236 (303)
T 1zy4_A 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY-----PFSTGMERVN 236 (303)
T ss_dssp CCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS-----CCSSHHHHHH
T ss_pred chhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh-----ccCCchhHHH
Confidence 998653211000 001122345799999999999865 68999999999987777543 11111 0000
Q ss_pred ccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 858 VLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 858 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.. ..+... ...............+++++.+||+.||++|||++|+++
T Consensus 237 ~~-~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 237 IL-KKLRSV---SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HH-HHHHST---TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HH-Hhcccc---ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 00 011110 000001111111222334777999999999999999986
No 214
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1e-31 Score=294.03 Aligned_cols=240 Identities=18% Similarity=0.170 Sum_probs=164.5
Q ss_pred hhCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
..++|+..+.||+|+||.||+|+... ..+.+.+|+.++++++||||+++++++...
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~----- 106 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEID----- 106 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-----
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeC-----
Confidence 35789999999999999999987541 125688999999999999999999998543
Q ss_pred ceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
...++||||+++++|.++++... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~ 183 (309)
T 2h34_A 107 GQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASA 183 (309)
T ss_dssp TEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC---
T ss_pred CeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcc
Confidence 35899999999999999986432 3467899999999998 999999999999999999999999999986
Q ss_pred cccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 792 LLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
..... ........||+.|+|||++.+..++.++||||+|++++++.....++.... ...+...+........
T Consensus 184 ~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---~~~~~~~~~~~~~~~~ 255 (309)
T 2h34_A 184 TTDEK-----LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ---LSVMGAHINQAIPRPS 255 (309)
T ss_dssp ------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH---HHHHHHHHHSCCCCGG
T ss_pred ccccc-----cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch---HHHHHHHhccCCCCcc
Confidence 53221 111234578999999999999999999999999977666544333322111 1111111111110000
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCC-CHHHHHHHHHhhHHHHh
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRI-GIREALRRLKSSQEILL 918 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-s~~ev~~~L~~~~~~~~ 918 (929)
......++ .+.+++.+||+.||++|| +++++++.|++..+...
T Consensus 256 ~~~~~~~~----~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 256 TVRPGIPV----AFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp GTSTTCCT----HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred ccCCCCCH----HHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 11111122 233377799999999999 99999999998765543
No 215
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=5e-32 Score=314.80 Aligned_cols=243 Identities=21% Similarity=0.221 Sum_probs=169.5
Q ss_pred CCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEE
Q 002376 327 STHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVL 406 (929)
Q Consensus 327 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 406 (929)
+++|++|+|++|.+++..|..+..++ +|++|+|++|.+++..| |+.+++|++|+|++|.|++..+ .++|++|
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFT-KLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCT-TCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCC-CCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 34777888888888776666777766 68888888888877665 7778888888888887774332 3778888
Q ss_pred EecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhh-cccCccE
Q 002376 407 GLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEIS-RLENVVT 485 (929)
Q Consensus 407 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~-~l~~L~~ 485 (929)
++++|.|++..+. .+++|+.|+|++|.+++..|..|+++++|+.|+|++|.|++.+ |..+. .+++|+.
T Consensus 105 ~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--------~~~l~~~l~~L~~ 173 (487)
T 3oja_A 105 HAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN--------FAELAASSDTLEH 173 (487)
T ss_dssp ECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEE--------GGGGGGGTTTCCE
T ss_pred ECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcC--------hHHHhhhCCcccE
Confidence 8888888765554 3467788888888888777777777888888888888877654 44444 5677888
Q ss_pred EEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcC
Q 002376 486 IDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNL 565 (929)
Q Consensus 486 LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 565 (929)
|+|++|.+++..+ +..+++|+.|+|++|+|++.+|. +..+++|+.|||++|+|++ +|..+..+++|+.|++++|++
T Consensus 174 L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l 249 (487)
T 3oja_A 174 LNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGF 249 (487)
T ss_dssp EECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCB
T ss_pred EecCCCccccccc--cccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCC
Confidence 8888888776522 33577788888888888765544 7777888888888888875 666777777888888888887
Q ss_pred c-ccCCCC-CCCCCCCccccc-------CCCCCcCC
Q 002376 566 E-GVVPSE-GIFRNMSNVHLK-------GNPKLCLQ 592 (929)
Q Consensus 566 ~-~~~p~~-~~~~~l~~l~l~-------~N~~~c~~ 592 (929)
. +.+|.. ..++.+..+.+. +|+..|..
T Consensus 250 ~c~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~c~~ 285 (487)
T 3oja_A 250 HCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTV 285 (487)
T ss_dssp CHHHHHHHHTTCHHHHHHHHHHHHHHTSSSSCCCSS
T ss_pred cCcchHHHHHhCCCCcEEeccccccccCCCcccccC
Confidence 7 333321 223334444443 56666643
No 216
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.97 E-value=1.7e-31 Score=288.50 Aligned_cols=228 Identities=23% Similarity=0.295 Sum_probs=166.5
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.++|+..+.||+|+||.||+|.... ..+.+.+|++++++++||||+++++++.. ...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 79 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-----ESF 79 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SSE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc-----CCE
Confidence 4689999999999999999986541 23568899999999999999999999854 334
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCc---eEEecccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMT---AKVGDFGLAR 790 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~---~ki~DfGla~ 790 (929)
.++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++
T Consensus 80 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 80 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 799999999999988775432 3467899999999998 9999999999999986654 9999999997
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhccc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
..... .......||+.|+|||++.+..++.++||||+|++++++.....++..... .+... .+....
T Consensus 157 ~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~~~-~~~~~~--- 223 (284)
T 3kk8_A 157 EVNDS-------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYA-QIKAGA--- 223 (284)
T ss_dssp ECCSS-------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHH-HHHHTC---
T ss_pred EcccC-------ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch--hHHHH-HHHhcc---
Confidence 65321 112335799999999999999999999999999776665444333322111 11111 111100
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..........+...+.+++.+|++.||++|||++|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 224 YDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp CCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00000000111222334777999999999999999986
No 217
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.97 E-value=4.1e-32 Score=291.92 Aligned_cols=223 Identities=26% Similarity=0.311 Sum_probs=145.3
Q ss_pred hCCCCCceeecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.++|+..+.||+|+||.||+|++. ...+.+.+|++++++++||||+++++++.+.+
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 86 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD----- 86 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC-----
Confidence 358999999999999999998654 11457889999999999999999999986433
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
..++||||+ +|++.+++.... .++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 87 ~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 162 (275)
T 2eue_A 87 EIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM 162 (275)
T ss_dssp CEEEEEECC-CEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC---
T ss_pred eEEEEehhc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceec
Confidence 489999999 678887765432 3467899999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCC-CCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERP-STAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
... .......||+.|+|||++.+..+ +.++||||+|++++++.....++.... ..... ..+... ..
T Consensus 163 ~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~-~~~~~~---~~ 229 (275)
T 2eue_A 163 TDG-------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--IPVLF-KNISNG---VY 229 (275)
T ss_dssp -------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS--HHHHH-HHHHHT---CC
T ss_pred cCc-------ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC--HHHHH-HHHHhC---CC
Confidence 321 11233469999999999988775 789999999977666544433332211 11111 111110 00
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
... ......+.+++.+|++.||++|||++|+++
T Consensus 230 ~~~----~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 230 TLP----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CCC----TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCC----ccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 111 111222334777999999999999999974
No 218
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.97 E-value=2.3e-32 Score=301.74 Aligned_cols=239 Identities=19% Similarity=0.204 Sum_probs=170.4
Q ss_pred CCCChHHHHHhhCCCCCc-eeecccCceeEEeccccC------------------cHHHHHHHHHHHHccC-Ccccccee
Q 002376 649 PKISYDELRRATGNFSHE-NLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVR-HRNLVKLI 708 (929)
Q Consensus 649 ~~~~~~~l~~~~~~~~~~-~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~-Hpniv~l~ 708 (929)
+.+.++..+...+.|... +.||+|+||.||+|+... ..+.+.+|+.++++++ ||||++++
T Consensus 16 ~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~ 95 (327)
T 3lm5_A 16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95 (327)
T ss_dssp CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEE
Confidence 344455555566677776 889999999999986541 2467899999999995 69999999
Q ss_pred eecccCCCCCcceEEEEEEecCCCCcccccccc----------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC-
Q 002376 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGE----------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE- 777 (929)
Q Consensus 709 ~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~----------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~- 777 (929)
+++.. ....++||||+++|+|.+++... ..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 96 ~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~ 167 (327)
T 3lm5_A 96 EVYEN-----TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSI 167 (327)
T ss_dssp EEEEC-----SSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCB
T ss_pred EEEEe-----CCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecC
Confidence 99854 34489999999999999998532 13367899999999998 9999999999999987
Q ss_pred --CCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchh
Q 002376 778 --EMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENV 855 (929)
Q Consensus 778 --~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~ 855 (929)
++.+||+|||+++..... .......||+.|+|||++.+..++.++||||+|++++++.....++.....
T Consensus 168 ~~~~~~kL~Dfg~a~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-- 238 (327)
T 3lm5_A 168 YPLGDIKIVDFGMSRKIGHA-------CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN-- 238 (327)
T ss_dssp TTBCCEEECCGGGCEEC----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--
T ss_pred CCCCcEEEeeCccccccCCc-------cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--
Confidence 789999999999875321 112335799999999999999999999999999777665544333322111
Q ss_pred hhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 856 LQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 856 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.+... .+... ...........+...+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~-~i~~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 239 QETYL-NISQV---NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HHHHH-HHHHT---CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hHHHH-HHHhc---ccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 11000 01110 000011111112223334777999999999999999975
No 219
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.97 E-value=4.8e-32 Score=315.63 Aligned_cols=223 Identities=24% Similarity=0.318 Sum_probs=166.0
Q ss_pred hCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.++|...++||+|+||+||+|+... ..+.+.+|++++++++|||||++++++.+ ..
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-----~~ 258 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET-----KT 258 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee-----CC
Confidence 3578888999999999999987641 23567899999999999999999999854 34
Q ss_pred eEEEEEEecCCCCccccccccc------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGl 788 (929)
..|+||||+++|+|.+++.... .++.||+.||+|||+. +|+||||||+|||++.+|.+||+|||+
T Consensus 259 ~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGl 335 (543)
T 3c4z_A 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGL 335 (543)
T ss_dssp EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecce
Confidence 5899999999999998886422 2357899999999998 999999999999999999999999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHH-hh
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQ-LM 867 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~ 867 (929)
++.+... .......+||+.|||||++.+..++.++||||+|+++|++..+..++...... .....+.. ..
T Consensus 336 a~~~~~~------~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~---~~~~~~~~~i~ 406 (543)
T 3c4z_A 336 AVELKAG------QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK---VENKELKQRVL 406 (543)
T ss_dssp CEECCTT------CCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC---CCHHHHHHHHH
T ss_pred eeeccCC------CcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc---hhHHHHHHHHh
Confidence 9875321 11123458999999999999999999999999998877766554444322110 00011111 11
Q ss_pred cccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCH
Q 002376 868 TSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGI 903 (929)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 903 (929)
....... ..++..+++++.+|++.||++||++
T Consensus 407 ~~~~~~p----~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 407 EQAVTYP----DKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp HCCCCCC----TTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred hcccCCC----cccCHHHHHHHHHhccCCHhHCCCC
Confidence 1111111 1122333447779999999999975
No 220
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.97 E-value=4.3e-32 Score=294.83 Aligned_cols=225 Identities=21% Similarity=0.258 Sum_probs=168.8
Q ss_pred hCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.++|...+.||+|+||.||+++... ..+.+.+|+.++++++||||+++++++.+ ..
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~ 88 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-----ND 88 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SS
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc-----CC
Confidence 3578889999999999999987641 23568899999999999999999999854 33
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
..++||||+++++|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 89 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 165 (294)
T 2rku_A 89 FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165 (294)
T ss_dssp EEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceec
Confidence 5899999999999999876322 3467999999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
... ........||+.|+|||++.+..++.++||||+|++++++.....++..... .+. ..........
T Consensus 166 ~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~----~~~~~~~~~~ 233 (294)
T 2rku_A 166 EYD------GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL--KET----YLRIKKNEYS 233 (294)
T ss_dssp CST------TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH--HHH----HHHHHTTCCC
T ss_pred ccC------ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHH----HHHHhhccCC
Confidence 321 1112335799999999999999999999999999877765544433322211 110 1111111111
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
... .+...+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~----~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 234 IPK----HINPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp CCT----TSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred Ccc----ccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 111 11222334777999999999999999986
No 221
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.97 E-value=2.9e-32 Score=298.69 Aligned_cols=173 Identities=25% Similarity=0.330 Sum_probs=137.4
Q ss_pred CCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
++|+..+.||+|+||.||+|+... ..+.+.+|++++++++||||+++++++... ...
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~ 77 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRK-----RRL 77 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecC-----CeE
Confidence 578899999999999999987641 135678999999999999999999998543 348
Q ss_pred EEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
++||||+++++|.++++..+ .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 78 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 78 HLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp EEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 99999999999988876332 3467899999999998 999999999999999999999999999986532
Q ss_pred ccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWV 847 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~ 847 (929)
.. .......||+.|+|||++.+ ..++.++||||+|++++++.....+
T Consensus 155 ~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p 202 (311)
T 4agu_A 155 PS------DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPL 202 (311)
T ss_dssp -----------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred cc------cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCC
Confidence 11 11234478999999999876 5689999999999877776554433
No 222
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.97 E-value=2.3e-32 Score=321.38 Aligned_cols=238 Identities=24% Similarity=0.318 Sum_probs=176.2
Q ss_pred HhhCCCCCceeecccCceeEEeccccC--------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 658 RATGNFSHENLIGSGSFGSVLHNERTG--------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 658 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~--------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
...++|+..+.||+|+||.||+|++.. ..++|.+|+++|++++|||||++++++.. ...+
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~~~ 337 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIY 337 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSCE
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee------ccce
Confidence 345678888999999999999987652 34689999999999999999999999854 2379
Q ss_pred EEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
+|||||++|+|.++++... .++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 338 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 338 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp EEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred EeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 9999999999999997421 2367899999999998 99999999999999999999999999998653
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
... ........++..|||||++.+..++.++||||+|++++++.. ...++..... .+ +...+....
T Consensus 415 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~--~~-----~~~~i~~~~- 481 (535)
T 2h8h_A 415 DNE-----YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--RE-----VLDQVERGY- 481 (535)
T ss_dssp CHH-----HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH--HH-----HHHHHHTTC-
T ss_pred CCc-----eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HH-----HHHHHHcCC-
Confidence 211 011122357889999999999999999999999987777554 3322221111 11 111111100
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
+..........+.+++.+||+.||++|||++++++.|+++.....
T Consensus 482 -~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 482 -RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526 (535)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred -CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence 000001112223337779999999999999999999998765443
No 223
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=7.3e-33 Score=312.72 Aligned_cols=248 Identities=19% Similarity=0.279 Sum_probs=168.2
Q ss_pred HHhhCCCCCceeecccCceeEEeccccC------------cHHHHHHHHHHHHccCCccccceeeecccCCC--------
Q 002376 657 RRATGNFSHENLIGSGSFGSVLHNERTG------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS-------- 716 (929)
Q Consensus 657 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-------- 716 (929)
....++|+..+.||+|+||.||+|++.. +.+...+|+++++.++|||||++++++.....
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 82 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP 82 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence 4456789999999999999999997642 22345589999999999999999999865432
Q ss_pred -------------------------CCcceEEEEEEecCCCCccccccc------------cccccccHHHHHHHhhhCC
Q 002376 717 -------------------------KNMEFLALVYEFLSNGSLGDWIHG------------ERKNELDITSALDYLHNDC 759 (929)
Q Consensus 717 -------------------------~~~~~~~lV~e~~~~gsL~~~l~~------------~~~~~~~ia~aL~yLH~~~ 759 (929)
....+.++||||++ |+|.+.++. .+.++.|+++||+|||+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~- 160 (383)
T 3eb0_A 83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL- 160 (383)
T ss_dssp ---------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-
T ss_pred ccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 23345899999998 587776652 123467999999999998
Q ss_pred CCCEEecCCCCCCeeec-CCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCC-CCCCCCCCCCcCC
Q 002376 760 EVPVVHSDLKPGNILLD-EEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESF 837 (929)
Q Consensus 760 ~~~iiHrDlk~~NILl~-~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~ 837 (929)
+|+||||||+||+++ .++.+||+|||+|+.+... .......||+.|+|||++.+.. ++.++||||+|++
T Consensus 161 --gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 161 --GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS-------EPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp --TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT-------SCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred --cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC-------CCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 999999999999998 6889999999999865322 1123347899999999988755 8999999999988
Q ss_pred CCCcchhHHhhhcCCc--hhhhccC----h---HHHHhhc--------c--cchhhhhhhHHHHHHHHHHhccccCCCCC
Q 002376 838 AGEFNIVKWVESNLPE--NVLQVLD----P---ELRQLMT--------S--NESQTIQLHDCLITIIGSVGLSCTTESPG 898 (929)
Q Consensus 838 ~~~~~~~~~~~~~~~~--~~~~~~~----~---~l~~~~~--------~--~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~ 898 (929)
++++.....++..... ...+++. + .+...-. . ........++..+..+.+++.+||+.||+
T Consensus 232 l~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 232 FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 8776655444332211 1111100 0 0000000 0 00000000111122233488899999999
Q ss_pred CCCCHHHHHH--HHHhhHH
Q 002376 899 GRIGIREALR--RLKSSQE 915 (929)
Q Consensus 899 ~RPs~~ev~~--~L~~~~~ 915 (929)
+|||+.|+++ .+++++.
T Consensus 312 ~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 312 LRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp GSCCHHHHHTSGGGHHHHH
T ss_pred hCCCHHHHhcCHHHHHHHh
Confidence 9999999984 4555544
No 224
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.97 E-value=9.3e-32 Score=302.19 Aligned_cols=178 Identities=24% Similarity=0.276 Sum_probs=136.0
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCC-CCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS-KNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-~~~~ 720 (929)
.++|+..+.||+|+||.||+|.... ..+.+.+|+.+++.++||||+++++++...+. ....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 4689999999999999999986541 13568899999999999999999999865432 1234
Q ss_pred eEEEEEEecCCCCcccccccc------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGE------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
..|+||||++ |+|.+++... ..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 104 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179 (371)
T ss_dssp EEEEEEECCS-EEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred ceEEEEEcCC-CCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence 6899999997 5787776522 23467999999999998 999999999999999999999999999986532
Q ss_pred ccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
. ......+||+.|+|||++.+..++.++||||+|++++++.....++
T Consensus 180 ~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf 226 (371)
T 2xrw_A 180 S-------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 226 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred c-------cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence 1 1123457999999999999999999999999998887766554433
No 225
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=3.9e-32 Score=304.45 Aligned_cols=236 Identities=22% Similarity=0.285 Sum_probs=162.7
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCC-CCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS-KNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-~~~~ 720 (929)
.++|+..+.||+|+||.||+|.+.. ..+++.+|++++++++||||+++++++...+. ....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 4678999999999999999987541 13567899999999999999999999875432 1123
Q ss_pred eEEEEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
..|+||||+ +++|.++++... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred eEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 469999999 789998886422 3467999999999998 99999999999999999999999999998642
Q ss_pred cccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhc------------
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQV------------ 858 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~------------ 858 (929)
. .....+||+.|+|||++.+ ..++.++||||+|++++++..+..++..... .+..+
T Consensus 180 ~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 180 S---------EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV 250 (367)
T ss_dssp S---------SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred c---------ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 1 1233578999999999887 6799999999999887776555443322111 01000
Q ss_pred ---cChHHHHhhc---ccchhh-hhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 859 ---LDPELRQLMT---SNESQT-IQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 859 ---~~~~l~~~~~---~~~~~~-~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.......... ...... ..........+.+++.+|++.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0000110000 000000 0000011222334778999999999999999986
No 226
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.97 E-value=1.7e-32 Score=307.22 Aligned_cols=173 Identities=23% Similarity=0.359 Sum_probs=143.6
Q ss_pred CCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
++|+..+.||+|+||.||++++.. ..+.+.+|++++++++||||+++++++... ...+
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 107 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GEIS 107 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEET-----TEEE
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEEC-----CEEE
Confidence 578889999999999999987651 135788999999999999999999998643 3489
Q ss_pred EEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
+||||+++|+|.++++... .++.+++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 108 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 108 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp EEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred EEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 9999999999999987432 34678999999999832 7999999999999999999999999999765321
Q ss_pred cCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
......||+.|+|||++.+..++.++||||+|++++++.....++
T Consensus 186 --------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf 230 (360)
T 3eqc_A 186 --------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230 (360)
T ss_dssp --------C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCS
T ss_pred --------cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 123357999999999999999999999999998887766555444
No 227
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.97 E-value=4.3e-32 Score=300.59 Aligned_cols=225 Identities=21% Similarity=0.264 Sum_probs=169.0
Q ss_pred hCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.++|...+.||+|+||.||++++.. ..+.+.+|+.++++++||||+++++++.+. .
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~ 114 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN-----D 114 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----S
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC-----C
Confidence 4578889999999999999987541 235688999999999999999999998543 3
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
..++||||+++++|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 115 ~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 191 (335)
T 2owb_A 115 FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191 (335)
T ss_dssp EEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred eEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence 5899999999999999876422 3467999999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
... ........||+.|+|||++.+..++.++||||+|++++++.....++..... .+... .+.. ....
T Consensus 192 ~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~-~~~~---~~~~ 259 (335)
T 2owb_A 192 EYD------GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL--KETYL-RIKK---NEYS 259 (335)
T ss_dssp CST------TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHH-HHHH---TCCC
T ss_pred ccC------cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH--HHHHH-HHhc---CCCC
Confidence 321 1112345799999999999999999999999999877776544433322111 11110 1111 0111
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.. ..+...+.+++.+||+.||++||+++|+++
T Consensus 260 ~~----~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 260 IP----KHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp CC----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CC----ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 111222334777999999999999999986
No 228
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.97 E-value=1e-31 Score=323.49 Aligned_cols=221 Identities=23% Similarity=0.285 Sum_probs=166.7
Q ss_pred hhCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCC
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~ 718 (929)
..++|+..++||+|+||+||+|+... ..+.+.+|..++..+ +||+|+++++++.+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~----- 413 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT----- 413 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBC-----
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEe-----
Confidence 35689999999999999999987652 234577899999988 79999999999854
Q ss_pred cceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLAR 790 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~ 790 (929)
...+|+||||+++|+|.++++... .++.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+
T Consensus 414 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~ 490 (674)
T 3pfq_A 414 MDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 490 (674)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCE
T ss_pred CCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceee
Confidence 345899999999999999987432 3467999999999998 99999999999999999999999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhccc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
..... .......+||+.|||||++.+..++.++||||+|+++|++.....++..... .+++ .......
T Consensus 491 ~~~~~------~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~--~~~~----~~i~~~~ 558 (674)
T 3pfq_A 491 ENIWD------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELF----QSIMEHN 558 (674)
T ss_dssp ECCCT------TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH----HHHHSSC
T ss_pred ccccC------CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH--HHHH----HHHHhCC
Confidence 53211 1223456899999999999999999999999999887776555444432211 1111 1111111
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCH
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGI 903 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 903 (929)
.... ..+...+.+++.+|++.||++||++
T Consensus 559 ~~~p----~~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 559 VAYP----KSMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp CCCC----TTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred CCCC----ccCCHHHHHHHHHHccCCHHHCCCC
Confidence 1111 1122233347779999999999997
No 229
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.97 E-value=2.4e-32 Score=303.74 Aligned_cols=228 Identities=23% Similarity=0.319 Sum_probs=159.9
Q ss_pred hCCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCC--ccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRH--RNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~H--pniv~l~~~~~~~~~~~~~ 720 (929)
.+.|+..+.||+|+||.||++.... ..+.+.+|++++++++| |||+++++++... .
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~-----~ 82 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD-----Q 82 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----S
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeC-----C
Confidence 4568899999999999999986541 13578899999999986 9999999998543 3
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
..++|||| .+|+|.+++.... .++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++..
T Consensus 83 ~~~lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 83 YIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp EEEEEECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred EEEEEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 58999995 5789999987433 3467899999999998 999999999999997 578999999999876
Q ss_pred ccccCCCCCccccceeccccccccccccCC-----------CCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccCh
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLG-----------ERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDP 861 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (929)
.... ........+||+.|+|||++.+ ..++.++||||+|++++++.....++........
T Consensus 158 ~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----- 228 (343)
T 3dbq_A 158 QPDT----TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS----- 228 (343)
T ss_dssp ----------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-----
T ss_pred Cccc----ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH-----
Confidence 4221 1112234579999999999864 6789999999999887776555444432222110
Q ss_pred HHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 862 ELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 862 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.+........ ....+......+.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~--~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 229 KLHAIIDPNH--EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp HHHHHHCTTS--CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHhcCCc--ccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 0111110000 00000111112233777999999999999999975
No 230
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.97 E-value=4.9e-32 Score=303.80 Aligned_cols=182 Identities=22% Similarity=0.298 Sum_probs=146.0
Q ss_pred hCCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
.++|+..+.||+|+||.||+|+... ..+.+.+|++++++++||||+++++++...........
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 4689999999999999999986541 13578899999999999999999999976554444568
Q ss_pred EEEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
++||||++ |+|.++++... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 106 ~iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 181 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181 (364)
T ss_dssp EEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred EEEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence 99999997 58988876432 3467999999999998 9999999999999999999999999999876432
Q ss_pred cCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
... .......+||+.|+|||++.+. .++.++||||+|++++++.....++
T Consensus 182 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf 232 (364)
T 3qyz_A 182 HDH---TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232 (364)
T ss_dssp GCB---CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSS
T ss_pred CCc---cccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCC
Confidence 111 1112345899999999987654 4899999999998877765544333
No 231
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.97 E-value=6.9e-32 Score=296.58 Aligned_cols=244 Identities=20% Similarity=0.160 Sum_probs=170.7
Q ss_pred hCCCCCceeecccCceeEEecccc----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
.++|+..+.||+|+||.||+++.. ...+.+.+|++++++++||||+++++++.... ......+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRER-GAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE-TTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc-CCCceeE
Confidence 457889999999999999998753 12457889999999999999999999986432 2344689
Q ss_pred EEEEecCCCCcccccccc------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGE------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
+||||+++|+|.+++... ..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 999999999999988641 12367899999999998 999999999999999999999999999876
Q ss_pred cccccCCCC---CccccceeccccccccccccCCCC---CCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHH
Q 002376 792 LLERVDNQS---SISSTHVFMGSIGYVPPEYGLGER---PSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQ 865 (929)
Q Consensus 792 ~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 865 (929)
......... .........||+.|+|||++.+.. ++.++||||+|++++++.....++...... .+.+......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~ 262 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK-GDSVALAVQN 262 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT-TSCHHHHHHC
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc-cchhhHHhhc
Confidence 532111000 000112346799999999987664 689999999998777655443332211000 0000000111
Q ss_pred hhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhH
Q 002376 866 LMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQ 914 (929)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~ 914 (929)
.. ........++ .+.+++.+||+.||++|||++|+++.|+++.
T Consensus 263 ~~--~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 263 QL--SIPQSPRHSS----ALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp C----CCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred cC--CCCccccCCH----HHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 00 0000111112 2333777999999999999999999999864
No 232
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.97 E-value=5.8e-33 Score=312.83 Aligned_cols=230 Identities=13% Similarity=0.058 Sum_probs=162.8
Q ss_pred hCCCCCceeecccCceeEEecccc-------------------CcHHHHHHHH---HHHHccCCccccceeeecc-----
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT-------------------GSWKSFIAEC---ETLRNVRHRNLVKLITSCS----- 712 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~---~~l~~l~Hpniv~l~~~~~----- 712 (929)
.++|+..+.||+|+||.||+|++. ...+.|.+|+ +.+++++|||||++++.+.
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 467888999999999999998864 1246788999 5556668999999984433
Q ss_pred --cCCC---------CCc---ceEEEEEEecCCCCccccccccc---------------cccccHHHHHHHhhhCCCCCE
Q 002376 713 --SLDS---------KNM---EFLALVYEFLSNGSLGDWIHGER---------------KNELDITSALDYLHNDCEVPV 763 (929)
Q Consensus 713 --~~~~---------~~~---~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~ia~aL~yLH~~~~~~i 763 (929)
..+. .+. ...|+||||+ +|+|.+++.... .++.||+.||+|||+. +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 2210 000 1268999999 689999986311 2467999999999998 99
Q ss_pred EecCCCCCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCC-----------CCCCCCCCC
Q 002376 764 VHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE-----------RPSTAGDVP 832 (929)
Q Consensus 764 iHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DV~ 832 (929)
+||||||+|||++.++.+||+|||+|+.... .....+| +.|+|||++.+. .++.++|||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~---------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Dvw 297 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA---------RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAW 297 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC---------EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC---------cccCCCC-cCccChhhhcccccccccccccccCChhhhHH
Confidence 9999999999999999999999999985321 2234567 999999999887 899999999
Q ss_pred CCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HH
Q 002376 833 TSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR--RL 910 (929)
Q Consensus 833 s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~--~L 910 (929)
|+|++++++.....++..... .+.... +.. .. ...++ -+.+++.+||+.||++|||+.|+++ .+
T Consensus 298 SlG~il~elltg~~Pf~~~~~--~~~~~~-~~~----~~---~~~~~----~~~~li~~~L~~dp~~Rpt~~e~l~hp~f 363 (377)
T 3byv_A 298 ALGLVIYWIWCADLPITKDAA--LGGSEW-IFR----SC---KNIPQ----PVRALLEGFLRYPKEDRLLPLQAMETPEY 363 (377)
T ss_dssp HHHHHHHHHHHSSCCC--------CCSGG-GGS----SC---CCCCH----HHHHHHHHHTCSSGGGCCCHHHHHTSHHH
T ss_pred HHHHHHHHHHHCCCCCccccc--ccchhh-hhh----hc---cCCCH----HHHHHHHHHcCCCchhCCCHHHHhhChHH
Confidence 999877766544333321111 011100 000 00 01112 2233777999999999999999985 56
Q ss_pred HhhHHHH
Q 002376 911 KSSQEIL 917 (929)
Q Consensus 911 ~~~~~~~ 917 (929)
+++.+..
T Consensus 364 ~~~~~~~ 370 (377)
T 3byv_A 364 EQLRTEL 370 (377)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665543
No 233
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.97 E-value=1.2e-31 Score=296.54 Aligned_cols=175 Identities=23% Similarity=0.280 Sum_probs=144.2
Q ss_pred CCCCCceeecccCceeEEecccc-------------CcHHHHHHHHHHHHccC-CccccceeeecccCCCCCcceEEEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT-------------GSWKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~-------------~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
++|+..+.||+|+||.||+|+.. ...+.+.+|++++++++ ||||+++++++.... ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~---~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPV---SRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTT---TCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCC---CCceEEEE
Confidence 57889999999999999999653 24678999999999997 999999999986522 34579999
Q ss_pred EecCCCCccccccc-----cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC-ceEEeccccccccccccCCCC
Q 002376 727 EFLSNGSLGDWIHG-----ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM-TAKVGDFGLARFLLERVDNQS 800 (929)
Q Consensus 727 e~~~~gsL~~~l~~-----~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~-~~ki~DfGla~~~~~~~~~~~ 800 (929)
||+++++|.++++. ...++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+|+.....
T Consensus 113 e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~----- 184 (330)
T 3nsz_A 113 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG----- 184 (330)
T ss_dssp ECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT-----
T ss_pred eccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC-----
Confidence 99999999998763 224578999999999998 999999999999999776 8999999999865322
Q ss_pred CccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 801 SISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 801 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
.......||..|+|||++.+ ..++.++||||+|++++++.....++
T Consensus 185 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~ 231 (330)
T 3nsz_A 185 --QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231 (330)
T ss_dssp --CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred --CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCc
Confidence 11233478999999999887 66899999999998877765554443
No 234
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.97 E-value=2e-32 Score=307.88 Aligned_cols=244 Identities=9% Similarity=-0.020 Sum_probs=155.0
Q ss_pred hCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHcc--CCccccceee-------ec
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNV--RHRNLVKLIT-------SC 711 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l--~Hpniv~l~~-------~~ 711 (929)
...|+..+.||+|+||.||+|++.. ..+.+.+|+.+++.+ +||||++++. ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 3458889999999999999997541 134566775444444 6999888553 32
Q ss_pred ccCCCC------------CcceEEEEEEecCCCCcccccccc--------c-------cccccHHHHHHHhhhCCCCCEE
Q 002376 712 SSLDSK------------NMEFLALVYEFLSNGSLGDWIHGE--------R-------KNELDITSALDYLHNDCEVPVV 764 (929)
Q Consensus 712 ~~~~~~------------~~~~~~lV~e~~~~gsL~~~l~~~--------~-------~~~~~ia~aL~yLH~~~~~~ii 764 (929)
...... .....|+|||||+ |+|.++++.. + .++.||+.||+|||+. +|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCc
Confidence 221110 0144799999998 8999998732 1 2347999999999998 999
Q ss_pred ecCCCCCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCC--CCCCCCCCCCCCcCCCCCcc
Q 002376 765 HSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG--ERPSTAGDVPTSESFAGEFN 842 (929)
Q Consensus 765 HrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~s~g~~~~~~~ 842 (929)
||||||+|||++.++.+||+|||+|+..... .....||+.|+|||++.+ ..++.++||||+|++++++.
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ell 287 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTR---------GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVW 287 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCE---------EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHH
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCC---------ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHH
Confidence 9999999999999999999999999865211 113467799999999987 67999999999998877766
Q ss_pred hhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHHhhHHHH
Q 002376 843 IVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR--RLKSSQEIL 917 (929)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~--~L~~~~~~~ 917 (929)
....++........+........... ...........++..+.+++.+||+.||++|||+.|+++ .++++....
T Consensus 288 tg~~Pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~ 363 (371)
T 3q60_A 288 CLFLPFGLVTPGIKGSWKRPSLRVPG-TDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEI 363 (371)
T ss_dssp HSSCSTTBCCTTCTTCCCBCCTTSCC-CCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHHHH
T ss_pred hCCCCCCCcCcccccchhhhhhhhcc-ccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHHHH
Confidence 55544433311111111100000000 000000000011222334777999999999999999974 455554443
No 235
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.97 E-value=1.4e-31 Score=289.40 Aligned_cols=225 Identities=22% Similarity=0.256 Sum_probs=160.3
Q ss_pred CCCCCceeecccCceeEEecccc-----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT-----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~-----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
++|...+.||+|+||.||+++.. ...+.+.+|++++++++||||+++++++.. ....+
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~~~ 96 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFED-----YHNMY 96 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SSEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheec-----CCeEE
Confidence 46888999999999999988754 134678999999999999999999999854 33489
Q ss_pred EEEEecCCCCcccccccc------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeee---cCCCceEEecccc
Q 002376 724 LVYEFLSNGSLGDWIHGE------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILL---DEEMTAKVGDFGL 788 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl---~~~~~~ki~DfGl 788 (929)
+||||+++|+|.+++... ..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~ 173 (285)
T 3is5_A 97 IVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGL 173 (285)
T ss_dssp EEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCC
T ss_pred EEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeec
Confidence 999999999999887522 13467899999999998 99999999999999 4567899999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhc
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMT 868 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 868 (929)
++..... .......||+.|+|||++. +.++.++||||+|++++++.....++..... .+.... ...
T Consensus 174 a~~~~~~-------~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~--~~~~~~-~~~--- 239 (285)
T 3is5_A 174 AELFKSD-------EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL--EEVQQK-ATY--- 239 (285)
T ss_dssp CCC-----------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH-HHH---
T ss_pred ceecCCc-------ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH--HHHHhh-hcc---
Confidence 9865321 1123457999999999985 5689999999999877765554433322211 111100 000
Q ss_pred ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 869 SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
...............+. +++.+|++.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~-~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 240 KEPNYAVECRPLTPQAV-DLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CCCCCCC--CCCCHHHH-HHHHHHTCSCTTTSCCHHHHHT
T ss_pred CCcccccccCcCCHHHH-HHHHHHccCChhhCcCHHHHhc
Confidence 00000000000011222 3777999999999999999975
No 236
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.97 E-value=6.7e-32 Score=296.26 Aligned_cols=229 Identities=23% Similarity=0.257 Sum_probs=164.3
Q ss_pred hhCCCCCceeecccCceeEEeccccC--------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG--------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~--------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
..++|+..+.||+|+||.||+|.... ..+.+.+|+.++++++||||+++++++... ...++
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 101 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKN-----TDLWI 101 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEET-----TEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC-----CEEEE
Confidence 35679999999999999999987651 246789999999999999999999998643 34899
Q ss_pred EEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 725 VYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
||||+++|+|.+++... ..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 102 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT 178 (314)
T ss_dssp EEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred EeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence 99999999999988621 13367899999999998 9999999999999999999999999999865322
Q ss_pred cCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTI 875 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 875 (929)
. .......||+.|+|||++.+..++.++||||+|++++++.....++...... .. . ..... ......
T Consensus 179 ~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~-~-~~~~~----~~~~~~ 245 (314)
T 3com_A 179 M------AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM-RA-I-FMIPT----NPPPTF 245 (314)
T ss_dssp B------SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-HH-H-HHHHH----SCCCCC
T ss_pred c------cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH-HH-H-HHHhc----CCCccc
Confidence 1 1123357899999999999999999999999998777655444333222110 00 0 00000 000000
Q ss_pred hhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 876 QLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 876 ~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.........+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 246 RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 001111222334777999999999999999975
No 237
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.97 E-value=2.7e-32 Score=301.07 Aligned_cols=242 Identities=22% Similarity=0.290 Sum_probs=168.3
Q ss_pred CCChHHHHHhhCCCCCceeecccCceeEEecccc---------------CcHHHHHHHHHHHHcc-CCccccceeeeccc
Q 002376 650 KISYDELRRATGNFSHENLIGSGSFGSVLHNERT---------------GSWKSFIAECETLRNV-RHRNLVKLITSCSS 713 (929)
Q Consensus 650 ~~~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~---------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~ 713 (929)
.+++.++....++|+..+.||+|+||.||+|++. ...+.+.+|+.+++++ +||||+++++++..
T Consensus 13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 3455566677889999999999999999998764 2346789999999999 89999999999876
Q ss_pred CCCC-CcceEEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceE
Q 002376 714 LDSK-NMEFLALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAK 782 (929)
Q Consensus 714 ~~~~-~~~~~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 782 (929)
.... .....++||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEE
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEE
Confidence 4321 1346899999999999999986432 2357899999999998 999999999999999999999
Q ss_pred EeccccccccccccCCCCCccccceeccccccccccccC-----CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhh
Q 002376 783 VGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGL-----GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQ 857 (929)
Q Consensus 783 i~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~ 857 (929)
|+|||+++..... ........||+.|+|||++. +..++.++||||+|++++++.....++...... +
T Consensus 170 l~Dfg~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~ 241 (326)
T 2x7f_A 170 LVDFGVSAQLDRT------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM--R 241 (326)
T ss_dssp ECCCTTTC-------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH--H
T ss_pred EeeCcCceecCcC------ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--H
Confidence 9999999865321 11123357999999999987 567899999999998777765544333222110 0
Q ss_pred ccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 858 VLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 858 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.... .......... .......+.+++.+||+.||++||+++|+++
T Consensus 242 ----~~~~-~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 242 ----ALFL-IPRNPAPRLK-SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp ----HHHH-HHHSCCCCCS-CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ----HHHH-hhcCccccCC-ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000 0000000000 0011122333777999999999999999986
No 238
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.97 E-value=6.3e-32 Score=296.72 Aligned_cols=240 Identities=21% Similarity=0.167 Sum_probs=161.4
Q ss_pred CCCCC-ceeecccCceeEEecccc----------------CcHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcceE
Q 002376 661 GNFSH-ENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 661 ~~~~~-~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
+.|.. .+.||+|+||.||+|+.. ...+.+.+|++++.++ +||||+++++++.+. ...
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~-----~~~ 86 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEE-----DRF 86 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-----TEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC-----CEE
Confidence 46666 378999999999998754 1256789999999985 799999999998543 358
Q ss_pred EEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCc---eEEeccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMT---AKVGDFGLARF 791 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~---~ki~DfGla~~ 791 (929)
++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 87 YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred EEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 99999999999999986432 3467899999999998 9999999999999998775 99999999986
Q ss_pred cccccCCC-CCccccceeccccccccccccCC-----CCCCCCCCCCCCcCCCCCcchhHHhhhcCCch---hh-hccC-
Q 002376 792 LLERVDNQ-SSISSTHVFMGSIGYVPPEYGLG-----ERPSTAGDVPTSESFAGEFNIVKWVESNLPEN---VL-QVLD- 860 (929)
Q Consensus 792 ~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~---~~-~~~~- 860 (929)
........ .........+||+.|+|||++.+ ..++.++||||+|++++++.....++...... +. ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 243 (316)
T 2ac3_A 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACP 243 (316)
T ss_dssp ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCH
T ss_pred cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccch
Confidence 53211100 01111233569999999999875 45899999999998877765544443222110 00 0000
Q ss_pred ---hHHHHhhc-ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 861 ---PELRQLMT-SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 861 ---~~l~~~~~-~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..+..... ............+...+++++.+|++.||++|||++|+++
T Consensus 244 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 244 ACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 00111100 0000000000112223344778999999999999999986
No 239
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.97 E-value=1.2e-31 Score=296.11 Aligned_cols=238 Identities=20% Similarity=0.232 Sum_probs=170.0
Q ss_pred hCCCCCceeecccCceeEEecccc----------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT----------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSK 717 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~----------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 717 (929)
.++|+..+.||+|+||.||+|++. ...+++.+|+.++++++||||+++++++...+
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-- 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC--
Confidence 468899999999999999998732 12457889999999999999999999986533
Q ss_pred CcceEEEEEEecCCCCccccccccc---------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC---CC
Q 002376 718 NMEFLALVYEFLSNGSLGDWIHGER---------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE---EM 779 (929)
Q Consensus 718 ~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~---~~ 779 (929)
..++||||+++|+|.+++...+ .++.|++.||+|||+. +|+||||||+||+++. +.
T Consensus 107 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~ 180 (327)
T 2yfx_A 107 ---PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGR 180 (327)
T ss_dssp ---SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred ---CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcc
Confidence 3699999999999999987432 2356899999999998 9999999999999984 44
Q ss_pred ceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhc
Q 002376 780 TAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQV 858 (929)
Q Consensus 780 ~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~ 858 (929)
.+||+|||+++....... ........||+.|+|||++.+..++.++||||+|++++++.. ...++..... .
T Consensus 181 ~~kl~Dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~-- 252 (327)
T 2yfx_A 181 VAKIGDFGMARDIYRASY----YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--Q-- 252 (327)
T ss_dssp CEEECCCHHHHHHHC----------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--H--
T ss_pred eEEECccccccccccccc----cccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--H--
Confidence 699999999986532211 111223468999999999999999999999999977666543 2222211111 1
Q ss_pred cChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 859 LDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 859 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
.+.......... .........+.+++.+||+.||++||+++|+++.|+.+.....
T Consensus 253 ---~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~ 307 (327)
T 2yfx_A 253 ---EVLEFVTSGGRM--DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 307 (327)
T ss_dssp ---HHHHHHHTTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred ---HHHHHHhcCCCC--CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence 111111110000 0000111222337779999999999999999999999877543
No 240
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.97 E-value=7.7e-32 Score=302.08 Aligned_cols=184 Identities=27% Similarity=0.342 Sum_probs=144.5
Q ss_pred hHHHHHhhCCCCCceeecccCceeEEeccccCc--------------------------HHHHHHHHHHHHccCCccccc
Q 002376 653 YDELRRATGNFSHENLIGSGSFGSVLHNERTGS--------------------------WKSFIAECETLRNVRHRNLVK 706 (929)
Q Consensus 653 ~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~--------------------------~~~~~~E~~~l~~l~Hpniv~ 706 (929)
.+++....++|+..+.||+|+||.||+|..... .+.+.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 567888899999999999999999999865410 267899999999999999999
Q ss_pred eeeecccCCCCCcceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC
Q 002376 707 LITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE 777 (929)
Q Consensus 707 l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~ 777 (929)
+++++...+.......|+||||++ |+|.+++...+ .++.|++.||+|||+. +|+||||||+||+++.
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLAD 169 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECT
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcC
Confidence 999987655445567899999997 68888776432 2367899999999998 9999999999999999
Q ss_pred CCceEEeccccccccccccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHh
Q 002376 778 EMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWV 847 (929)
Q Consensus 778 ~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~ 847 (929)
++.+||+|||+++..... .......||+.|+|||++.+ ..++.++||||+|++++++.....+
T Consensus 170 ~~~~kl~Dfg~~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p 233 (362)
T 3pg1_A 170 NNDITICDFNLAREDTAD-------ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKAL 233 (362)
T ss_dssp TCCEEECCTTC----------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCCEEEEecCcccccccc-------cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCC
Confidence 999999999999854221 11234578999999999887 6789999999999887776554433
No 241
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.97 E-value=1.3e-31 Score=299.99 Aligned_cols=234 Identities=21% Similarity=0.286 Sum_probs=169.6
Q ss_pred HHHHHhhCCCCCceeecccCceeEEeccccC-------------c-----------HHHHHHHHHHHHcc-CCcccccee
Q 002376 654 DELRRATGNFSHENLIGSGSFGSVLHNERTG-------------S-----------WKSFIAECETLRNV-RHRNLVKLI 708 (929)
Q Consensus 654 ~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~-------------~-----------~~~~~~E~~~l~~l-~Hpniv~l~ 708 (929)
+......++|+..+.||+|+||.||+|+... . .+.+.+|+.+++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 3344556789999999999999999987641 0 34678999999999 799999999
Q ss_pred eecccCCCCCcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCc
Q 002376 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMT 780 (929)
Q Consensus 709 ~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~ 780 (929)
+++.. ....++||||+++|+|.+++.... .++.||+.||+|||+. +|+||||||+||++++++.
T Consensus 167 ~~~~~-----~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ 238 (365)
T 2y7j_A 167 DSYES-----SSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQ 238 (365)
T ss_dssp EEEEB-----SSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred EEEee-----CCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCC
Confidence 99854 345899999999999999886432 3467899999999998 9999999999999999999
Q ss_pred eEEeccccccccccccCCCCCccccceeccccccccccccCC------CCCCCCCCCCCCcCCCCCcchhHHhhhcCCch
Q 002376 781 AKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG------ERPSTAGDVPTSESFAGEFNIVKWVESNLPEN 854 (929)
Q Consensus 781 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~ 854 (929)
+||+|||+++.+... .......||+.|+|||++.+ ..++.++||||+|+++|++.....++.....
T Consensus 239 ikl~DfG~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~- 310 (365)
T 2y7j_A 239 IRLSDFGFSCHLEPG-------EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ- 310 (365)
T ss_dssp EEECCCTTCEECCTT-------CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-
T ss_pred EEEEecCcccccCCC-------cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH-
Confidence 999999999876422 11234579999999999863 3588999999999877766554433322111
Q ss_pred hhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 855 VLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 855 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.+... .+.. .........+......+.+++.+|++.||++|||++|+++
T Consensus 311 -~~~~~-~i~~---~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 311 -ILMLR-MIME---GQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp -HHHHH-HHHH---TCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -HHHHH-HHHh---CCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 01000 0110 0000000011111222334777999999999999999985
No 242
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=2.2e-32 Score=305.28 Aligned_cols=229 Identities=20% Similarity=0.245 Sum_probs=166.9
Q ss_pred hCCCCCceeecccCceeEEecccc-----------------------CcHHHHHHHHHHHHcc-CCccccceeeecccCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT-----------------------GSWKSFIAECETLRNV-RHRNLVKLITSCSSLD 715 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~-----------------------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~ 715 (929)
.++|+..+.||+|+||.||+++.. ...+.+.+|+++++++ +||||+++++++...
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~- 131 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE- 131 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET-
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC-
Confidence 468999999999999999988652 1234577899999999 699999999998543
Q ss_pred CCCcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccc
Q 002376 716 SKNMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFG 787 (929)
Q Consensus 716 ~~~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfG 787 (929)
...++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 132 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG 204 (355)
T 1vzo_A 132 ----TKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFG 204 (355)
T ss_dssp ----TEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSS
T ss_pred ----ceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCC
Confidence 34899999999999999986432 2356899999999998 99999999999999999999999999
Q ss_pred cccccccccCCCCCccccceeccccccccccccCCC--CCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhccChHH
Q 002376 788 LARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE--RPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQVLDPEL 863 (929)
Q Consensus 788 la~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~l 863 (929)
+++...... .......+||+.|+|||++.+. .++.++||||+|++++++.....++..... ...++.
T Consensus 205 ~a~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~---- 275 (355)
T 1vzo_A 205 LSKEFVADE-----TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS---- 275 (355)
T ss_dssp EEEECCGGG-----GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHH----
T ss_pred CCeecccCC-----CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHH----
Confidence 998653221 1122345799999999999863 478999999999887776554444322111 111111
Q ss_pred HHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCC-----CHHHHHHH
Q 002376 864 RQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRI-----GIREALRR 909 (929)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~~ 909 (929)
........... ..+...+++++.+||+.||++|| +++|+++.
T Consensus 276 ~~~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 276 RRILKSEPPYP----QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp HHHHHCCCCCC----TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred HHHhccCCCCC----cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 11111111111 11223334477799999999999 89998764
No 243
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.97 E-value=4.7e-32 Score=300.46 Aligned_cols=244 Identities=17% Similarity=0.175 Sum_probs=159.3
Q ss_pred hhCCCCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccC-CccccceeeecccCCC---CC
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVR-HRNLVKLITSCSSLDS---KN 718 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~---~~ 718 (929)
...+|+..+.||+|+||.||+|++.. ..+.+.+|+.+++++. ||||+++++++..... ..
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 34578899999999999999998641 2457889999999996 9999999999853221 23
Q ss_pred cceEEEEEEecCCCCcccccccc-----------ccccccHHHHHHHhhhCCCCC--EEecCCCCCCeeecCCCceEEec
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGE-----------RKNELDITSALDYLHNDCEVP--VVHSDLKPGNILLDEEMTAKVGD 785 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~-----------~~~~~~ia~aL~yLH~~~~~~--iiHrDlk~~NILl~~~~~~ki~D 785 (929)
....++||||++ |+|.+++... ..++.|++.||+|||+. + |+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEec
Confidence 456899999995 7998887531 13367899999999997 6 99999999999999999999999
Q ss_pred cccccccccccCCCC------Cccccceecccccccccccc---CCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhh
Q 002376 786 FGLARFLLERVDNQS------SISSTHVFMGSIGYVPPEYG---LGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVL 856 (929)
Q Consensus 786 fGla~~~~~~~~~~~------~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~ 856 (929)
||+++.......... .........||+.|+|||++ .+..++.++||||+|++++++.....++.... ..
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~--~~ 259 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA--KL 259 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchh--HH
Confidence 999987643211100 00111244699999999998 56678999999999977766544333322111 11
Q ss_pred hccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHh
Q 002376 857 QVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILL 918 (929)
Q Consensus 857 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 918 (929)
++..... .... ....... +.+++.+||+.||++|||++|+++.|+++.+...
T Consensus 260 ~~~~~~~----~~~~--~~~~~~~----~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 260 RIVNGKY----SIPP--HDTQYTV----FHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp ------C----CCCT--TCCSSGG----GHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred HhhcCcc----cCCc--ccccchH----HHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 1111100 0000 0011111 2236779999999999999999999999987644
No 244
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.96 E-value=2.7e-32 Score=300.74 Aligned_cols=172 Identities=26% Similarity=0.352 Sum_probs=134.5
Q ss_pred CCCCCceeecccCceeEEeccccCc-----------------HHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTGS-----------------WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~~-----------------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
++|...+.||+|+||.||+|+.... ...+.+|++++++++||||+++++++... ...+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 76 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE-----KSLT 76 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECS-----SCEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeC-----CEEE
Confidence 5788999999999999999976511 11345799999999999999999998643 3489
Q ss_pred EEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
+||||++ |+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 77 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 152 (324)
T 3mtl_A 77 LVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSI 152 (324)
T ss_dssp EEEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred EEecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence 9999997 68888876432 2367899999999998 999999999999999999999999999985432
Q ss_pred ccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWV 847 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~ 847 (929)
. ........||+.|+|||++.+ ..++.++||||+|++++++.....+
T Consensus 153 ~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p 200 (324)
T 3mtl_A 153 P------TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPL 200 (324)
T ss_dssp ----------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred C------ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 1 112233478999999999877 5689999999999887776554433
No 245
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.96 E-value=5.1e-32 Score=305.98 Aligned_cols=227 Identities=23% Similarity=0.316 Sum_probs=160.1
Q ss_pred CCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccC--CccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVR--HRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~--Hpniv~l~~~~~~~~~~~~~~ 721 (929)
+.|+..+.||+|+||.||++.... ..+.+.+|++++++++ |||||++++++... ..
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~-----~~ 130 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD-----QY 130 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----SE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecC-----CE
Confidence 358999999999999999986541 2357889999999996 59999999998643 34
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.|+||| +.+|+|.+++.... .++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++.+.
T Consensus 131 ~~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 131 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EEEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred EEEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 899999 56889999986432 3367899999999998 999999999999996 5799999999998764
Q ss_pred cccCCCCCccccceeccccccccccccCC-----------CCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChH
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLG-----------ERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPE 862 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (929)
.... .......+||+.|||||++.+ ..++.++||||+|+++|++.....++........ .
T Consensus 206 ~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~-----~ 276 (390)
T 2zmd_A 206 PDTT----SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-----K 276 (390)
T ss_dssp ------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-----H
T ss_pred CCCc----cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH-----H
Confidence 2211 111234579999999999875 4689999999999887776554444332221110 1
Q ss_pred HHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 863 LRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 863 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
+......... ...+......+.+++.+||+.||++|||++|+++
T Consensus 277 ~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 277 LHAIIDPNHE--IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp HHHHHCTTSC--CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHhCcccc--CCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 1111110000 0000011122333777999999999999999975
No 246
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.96 E-value=6.8e-32 Score=293.30 Aligned_cols=227 Identities=21% Similarity=0.296 Sum_probs=162.9
Q ss_pred CCCCCceeecccCceeEEecccc----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~l 724 (929)
+.|....+||+|+||.||+|++. ...+.+.+|+.+++.++||||+++++++... ...++
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~l 96 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN-----GFIKI 96 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEET-----TEEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeC-----CcEEE
Confidence 34555679999999999998754 1246788999999999999999999998543 35899
Q ss_pred EEEecCCCCccccccccc-----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC-CCceEEecccccccc
Q 002376 725 VYEFLSNGSLGDWIHGER-----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE-EMTAKVGDFGLARFL 792 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~~~-----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~-~~~~ki~DfGla~~~ 792 (929)
||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++..
T Consensus 97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~ 173 (295)
T 2clq_A 97 FMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL 173 (295)
T ss_dssp EEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEES
T ss_pred EEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeeccccccc
Confidence 999999999999886431 1356899999999998 9999999999999987 899999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCC--CCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhccc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGER--PSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
... ........||+.|+|||++.+.. ++.++||||+|++++++.....++................ ...
T Consensus 174 ~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~---~~~ 244 (295)
T 2clq_A 174 AGI------NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF---KVH 244 (295)
T ss_dssp CC-----------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHH---CCC
T ss_pred CCC------CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccc---ccc
Confidence 321 11123357899999999987654 8999999999987777655444333222111000000000 000
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.... ..+...+.+++.+||+.||++||+++|+++
T Consensus 245 ~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 245 PEIP----ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp CCCC----TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cccc----ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111 111222333777999999999999999975
No 247
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.96 E-value=1.8e-31 Score=308.04 Aligned_cols=246 Identities=17% Similarity=0.171 Sum_probs=174.7
Q ss_pred hCCCCCceeecccCceeEEecccc--------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT--------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~--------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV 725 (929)
.++|+..++||+|+||.||+|++. ...+++.+|+++++.++|++.+..+.++.. .....++|
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~----~~~~~~lv 81 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGV----EGDYNVLV 81 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEE----ETTEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEe----eCCEEEEE
Confidence 468999999999999999999754 123468899999999988665555544432 23357999
Q ss_pred EEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeee---cCCCceEEeccccccccc
Q 002376 726 YEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILL---DEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl---~~~~~~ki~DfGla~~~~ 793 (929)
|||+ +|+|.+++... ..++.||+.||+|||+. +||||||||+|||+ +.++.+||+|||+++.+.
T Consensus 82 me~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 82 MDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 9999 99999998632 23467999999999998 99999999999999 688999999999998764
Q ss_pred cccCCCC-CccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhcccc
Q 002376 794 ERVDNQS-SISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 794 ~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~ 871 (929)
....... .........||+.|+|||++.+..++.++||||+|+++|++.....++..... ...+.+............
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI 237 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH
Confidence 3221110 11122356899999999999999999999999999888776665555543322 111111111111000000
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEI 916 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 916 (929)
......+..-+.+++.+||+.||++||+++++++.|+++...
T Consensus 238 ---~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 238 ---EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp ---HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ---HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 000001112223377799999999999999999999998664
No 248
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.96 E-value=5.6e-32 Score=298.85 Aligned_cols=175 Identities=26% Similarity=0.394 Sum_probs=133.7
Q ss_pred HhhCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 658 RATGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 658 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
...++|+..+.||+|+||.||+|++.. ..+.+.+|++++++++||||+++++++...
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 105 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHN----- 105 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEET-----
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecC-----
Confidence 445689999999999999999986541 134577999999999999999999998543
Q ss_pred ceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeee-----cCCCceEEecc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILL-----DEEMTAKVGDF 786 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl-----~~~~~~ki~Df 786 (929)
...++||||++ |+|.+++.... .++.|++.||+|||+. +|+||||||+|||+ ++++.+||+||
T Consensus 106 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Df 181 (329)
T 3gbz_A 106 HRLHLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDF 181 (329)
T ss_dssp TEEEEEEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCT
T ss_pred CEEEEEEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcC
Confidence 35899999997 59998886432 3467999999999998 99999999999999 45556999999
Q ss_pred ccccccccccCCCCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCcchhHHh
Q 002376 787 GLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEFNIVKWV 847 (929)
Q Consensus 787 Gla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~~~~~~~ 847 (929)
|+++..... ........||+.|+|||++.+.. ++.++||||+|++++++.....+
T Consensus 182 g~a~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~p 237 (329)
T 3gbz_A 182 GLARAFGIP------IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPL 237 (329)
T ss_dssp THHHHHC-----------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCccccCCc------ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 999875321 11223457899999999998754 89999999999887776554433
No 249
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.96 E-value=3.5e-32 Score=296.67 Aligned_cols=228 Identities=20% Similarity=0.279 Sum_probs=164.2
Q ss_pred hCCCCCceeecccCceeEEecccc----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
.++|+..+.||+|+||.||+|+.. ...+.+.+|++++++++||||+++++++... ...+
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 92 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHD-----GKLW 92 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC------CEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeC-----CeEE
Confidence 467899999999999999998765 2346789999999999999999999998653 3489
Q ss_pred EEEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
+||||+++|+|.+++... ..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 93 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (302)
T 2j7t_A 93 IMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK 169 (302)
T ss_dssp EEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred EEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence 999999999999887532 13367899999999998 999999999999999999999999999864321
Q ss_pred ccCCCCCccccceecccccccccccc-----CCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcc
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYG-----LGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTS 869 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 869 (929)
.. .......||+.|+|||++ .+..++.++||||+|++++++.....++..... .+. .......
T Consensus 170 ~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~----~~~~~~~ 237 (302)
T 2j7t_A 170 TL------QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP--MRV----LLKIAKS 237 (302)
T ss_dssp HH------HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHH----HHHHHHS
T ss_pred cc------cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH--HHH----HHHHhcc
Confidence 11 112234789999999998 467789999999999877765444333322211 010 0110000
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.... .......+..+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 238 DPPT-LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp CCCC-CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred CCcc-cCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0000 0001111222333777999999999999999975
No 250
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.96 E-value=2.4e-31 Score=319.26 Aligned_cols=236 Identities=22% Similarity=0.270 Sum_probs=171.8
Q ss_pred hhCCCCCceeecccCceeEEeccccC--------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCC
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG--------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~--------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 718 (929)
..++|+..+.||+|+||.||+|.+.. ..+.|.+|+.++++++|||||++++++.+.
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~---- 463 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN---- 463 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS----
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC----
Confidence 34678889999999999999986531 136789999999999999999999998431
Q ss_pred cceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
..++||||+++|+|.++++... .++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 464 --~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a 538 (656)
T 2j0j_A 464 --PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLS 538 (656)
T ss_dssp --SCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCC
T ss_pred --ceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCC
Confidence 2699999999999999987432 2367899999999998 9999999999999999999999999999
Q ss_pred cccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhc
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMT 868 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~ 868 (929)
+...... ........||+.|||||++.+..++.++||||+|++++++.+ ...++..... .+.+. .+..
T Consensus 539 ~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~--~~~~~-~i~~--- 607 (656)
T 2j0j_A 539 RYMEDST-----YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIG-RIEN--- 607 (656)
T ss_dssp CSCCC---------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHH-HHHH---
T ss_pred eecCCCc-----ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH--HHHHH-HHHc---
Confidence 8753221 111223467889999999998999999999999987776543 2222221111 11110 1111
Q ss_pred ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHH
Q 002376 869 SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEIL 917 (929)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 917 (929)
.. +...+...+..+.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 608 -~~--~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 608 -GE--RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp -TC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -CC--CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 00 00001111222334777999999999999999999999987653
No 251
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.96 E-value=4.9e-31 Score=307.86 Aligned_cols=235 Identities=22% Similarity=0.224 Sum_probs=167.1
Q ss_pred hCCCCCceeecccCceeEEecccc------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.+.|+..+.||+|+||.||+|+.. ...+.+.+|+.+++.++|||||+++++|.. ...
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~~ 110 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED-----KRN 110 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SSE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----CCE
Confidence 346888999999999999998764 124578899999999999999999999954 335
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC---CCceEEecccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE---EMTAKVGDFGLAR 790 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~---~~~~ki~DfGla~ 790 (929)
.|+||||+++|+|.+++.... .++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+|+
T Consensus 111 ~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 111 YYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 899999999999988875332 3467999999999998 9999999999999976 4569999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhccc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
..... ......+||+.|+|||++. +.++.++||||+|+++|++.....++..... .+++...........
T Consensus 188 ~~~~~-------~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~~~~~~~ 257 (494)
T 3lij_A 188 VFENQ-------KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD--QEILRKVEKGKYTFD 257 (494)
T ss_dssp ECBTT-------BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTCCCCC
T ss_pred ECCCC-------ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCCCCC
Confidence 76321 1223457999999999986 5699999999999877765544433322211 111111111111101
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHHhhHHH
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR--RLKSSQEI 916 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~--~L~~~~~~ 916 (929)
. ..+..++..+++++.+||+.||++|||+.|+++ .+++....
T Consensus 258 ~----~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~~ 301 (494)
T 3lij_A 258 S----PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSK 301 (494)
T ss_dssp S----GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHHHH
T ss_pred c----hhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCccc
Confidence 1 111112223334777999999999999999984 35554433
No 252
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.96 E-value=1.1e-31 Score=293.05 Aligned_cols=227 Identities=24% Similarity=0.268 Sum_probs=166.0
Q ss_pred hCCCCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLA 723 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~ 723 (929)
.++|...+.||+|+||.||+++... ..+.+.+|+.++++++||||+++++++... ...+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 82 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYEST-----THYY 82 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECS-----SEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccC-----CEEE
Confidence 3578889999999999999987541 235688999999999999999999998543 3589
Q ss_pred EEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeee---cCCCceEEecccccccc
Q 002376 724 LVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILL---DEEMTAKVGDFGLARFL 792 (929)
Q Consensus 724 lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl---~~~~~~ki~DfGla~~~ 792 (929)
+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||+++..
T Consensus 83 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 83 LVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp EEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred EEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 9999999999999886332 2367899999999998 99999999999999 78899999999998754
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccch
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 872 (929)
.. .......||+.|+|||++.+..++.++||||+|++++++.....++..... .+... .+..... .
T Consensus 160 ~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~-~i~~~~~---~ 225 (304)
T 2jam_A 160 QN--------GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE--SKLFE-KIKEGYY---E 225 (304)
T ss_dssp CC--------BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHH-HHHHCCC---C
T ss_pred CC--------CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHH-HHHcCCC---C
Confidence 21 112334799999999999999999999999999877765544433322111 11111 1111000 0
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
........++..+.+++.+|++.||++|||++|+++
T Consensus 226 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 226 FESPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp CCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 000011112222334777999999999999999985
No 253
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.96 E-value=7.6e-31 Score=282.05 Aligned_cols=230 Identities=20% Similarity=0.220 Sum_probs=168.1
Q ss_pred hCCCCCceeecccCceeEEecccc-----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT-----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~-----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
.++|+..+.||+|+||.||+|... ...+.+.+|+.+++.++||||+++++++... ...
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 80 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG-----NIQ 80 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-----TEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcC-----CEE
Confidence 357888999999999999998654 1246788999999999999999999998543 347
Q ss_pred EEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 157 (276)
T 2yex_A 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (276)
T ss_dssp EEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence 99999999999999987432 3367899999999998 999999999999999999999999999986532
Q ss_pred ccCCCCCccccceeccccccccccccCCCCC-CCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchh
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGERP-STAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQ 873 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 873 (929)
... ........||+.|+|||++.+..+ +.++||||+|++++++.....++...... .............
T Consensus 158 ~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~- 227 (276)
T 2yex_A 158 NNR----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS-----CQEYSDWKEKKTY- 227 (276)
T ss_dssp TTE----ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT-----SHHHHHHHTTCTT-
T ss_pred Ccc----hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH-----HHHHHHhhhcccc-
Confidence 211 111234578999999999988775 78999999998777655444333222110 1111111110000
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 874 TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
. .....+...+.+++.+|++.||++|||++|+++
T Consensus 228 ~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 228 L-NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp S-TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred c-CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 0 000111222334777999999999999999875
No 254
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.96 E-value=6e-31 Score=306.59 Aligned_cols=227 Identities=23% Similarity=0.276 Sum_probs=166.4
Q ss_pred hCCCCCceeecccCceeEEecccc------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.++|+..+.||+|+||.||+|+.. ...+.+.+|++++++++|||||++++++.. ...
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~~ 95 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-----SSS 95 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SSE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc-----CCE
Confidence 357889999999999999998764 234578899999999999999999999854 345
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeec---CCCceEEecccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLD---EEMTAKVGDFGLAR 790 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~---~~~~~ki~DfGla~ 790 (929)
.|+||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||++ .++.+||+|||+|+
T Consensus 96 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 96 FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 899999999999998875332 3467899999999998 999999999999995 45689999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhccc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
..... ......+||+.|+|||++.+ .++.++||||+|+++|++.....++..... .+++.........
T Consensus 173 ~~~~~-------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~~~~~-- 240 (486)
T 3mwu_A 173 CFQQN-------TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--YDILKRVETGKYA-- 240 (486)
T ss_dssp TBCCC-----------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTCCC--
T ss_pred ECCCC-------CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCCC--
Confidence 65321 11234579999999999876 599999999999877765554433322211 1111111111111
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
...+.+..++.-+++++.+||+.||++|||+.|+++
T Consensus 241 --~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 241 --FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp --SCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred --CCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 111111122223334777999999999999999986
No 255
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=1.4e-31 Score=297.91 Aligned_cols=173 Identities=24% Similarity=0.381 Sum_probs=136.3
Q ss_pred HHhhCCCCCceeecccCceeEEeccccCc---------------------HHHHHHHHHHHHccCCccccceeeecccCC
Q 002376 657 RRATGNFSHENLIGSGSFGSVLHNERTGS---------------------WKSFIAECETLRNVRHRNLVKLITSCSSLD 715 (929)
Q Consensus 657 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~---------------------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~ 715 (929)
....++|+..+.||+|+||.||+|++..+ .+.+.+|++++++++||||+++++++...
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 84 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK- 84 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT-
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeC-
Confidence 34457899999999999999999876511 13678999999999999999999998543
Q ss_pred CCCcceEEEEEEecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecc
Q 002376 716 SKNMEFLALVYEFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDF 786 (929)
Q Consensus 716 ~~~~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~Df 786 (929)
...++||||+++ +|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 85 ----~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Df 156 (346)
T 1ua2_A 85 ----SNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADF 156 (346)
T ss_dssp ----TCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC
T ss_pred ----CceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEec
Confidence 347999999975 8888776432 2367899999999998 9999999999999999999999999
Q ss_pred ccccccccccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchh
Q 002376 787 GLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIV 844 (929)
Q Consensus 787 Gla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~ 844 (929)
|+++..... ........||+.|+|||++.+. .++.++||||+|++++++...
T Consensus 157 g~a~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g 209 (346)
T 1ua2_A 157 GLAKSFGSP------NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLR 209 (346)
T ss_dssp GGGSTTTSC------CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHS
T ss_pred ccceeccCC------cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHC
Confidence 999865321 1122345789999999998765 489999999999887776543
No 256
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.96 E-value=5.7e-32 Score=306.18 Aligned_cols=238 Identities=22% Similarity=0.261 Sum_probs=163.3
Q ss_pred CCCCCceeecccCceeEEeccccCc-----------HHHHHHHHHHHHccCCccccceeeecccCCC-CCcceEEEEEEe
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTGS-----------WKSFIAECETLRNVRHRNLVKLITSCSSLDS-KNMEFLALVYEF 728 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~~-----------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-~~~~~~~lV~e~ 728 (929)
.+|+..+.||+|+||+||+|+.... .+...+|+++++.++|||||++++++..... ....+.++||||
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~ 119 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEY 119 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEEC
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeec
Confidence 4688899999999999999987521 2234479999999999999999999876543 334557899999
Q ss_pred cCCCCcccccc-----------ccccccccHHHHHHHhhhCCCCCEEecCCCCCCeeec-CCCceEEecccccccccccc
Q 002376 729 LSNGSLGDWIH-----------GERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLD-EEMTAKVGDFGLARFLLERV 796 (929)
Q Consensus 729 ~~~gsL~~~l~-----------~~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~-~~~~~ki~DfGla~~~~~~~ 796 (929)
++++.+....+ ..+.++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+|+......
T Consensus 120 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~ 196 (394)
T 4e7w_A 120 VPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE 196 (394)
T ss_dssp CSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred cCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC
Confidence 98653332221 1123467999999999998 999999999999999 79999999999998753221
Q ss_pred CCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhccC------h-HHHHh
Q 002376 797 DNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQVLD------P-ELRQL 866 (929)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~~~------~-~l~~~ 866 (929)
......||+.|+|||++.+. .++.++||||+|++++++..+..++..... ...+++. . .+...
T Consensus 197 -------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~ 269 (394)
T 4e7w_A 197 -------PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTM 269 (394)
T ss_dssp -------CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred -------CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 12235789999999998775 489999999999888776655444332221 0111100 0 00000
Q ss_pred hc--------ccc--hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 867 MT--------SNE--SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 867 ~~--------~~~--~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.. ... .............+.+++.+||+.||++|||+.|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp CGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 00 000 0000000001122334778999999999999999986
No 257
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.96 E-value=1.3e-31 Score=298.84 Aligned_cols=181 Identities=24% Similarity=0.364 Sum_probs=141.4
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCC---CC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS---KN 718 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~---~~ 718 (929)
.++|+..+.||+|+||.||+|+... ....+.+|++++++++||||+++++++..... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 3578999999999999999987641 23478899999999999999999999876432 11
Q ss_pred cceEEEEEEecCCCCcccccccc---------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGE---------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~---------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
....++||||+++ ++.+.+... ..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 3458999999974 676665432 23467899999999998 9999999999999999999999999999
Q ss_pred cccccccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHH
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKW 846 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~ 846 (929)
+.+...... .........||+.|+|||++.+. .++.++||||+|++++++.....
T Consensus 172 ~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~ 227 (351)
T 3mi9_A 172 RAFSLAKNS--QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 227 (351)
T ss_dssp EECCCCSSS--SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred ccccccccc--cccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCC
Confidence 876432111 11223345789999999998764 58999999999988777655433
No 258
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.96 E-value=1.2e-32 Score=300.38 Aligned_cols=240 Identities=25% Similarity=0.290 Sum_probs=154.6
Q ss_pred HhhCCCCCceeecccCceeEEecccc-----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 658 RATGNFSHENLIGSGSFGSVLHNERT-----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 658 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
...++|+..+.||+|+||.||+|... ...+++.+|++++++++||||+++++++...+
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 86 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD----- 86 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSS-----
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC-----
Confidence 34578999999999999999998763 12356789999999999999999999986543
Q ss_pred eEEEEEEecCCCCcccccccc----------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEe
Q 002376 721 FLALVYEFLSNGSLGDWIHGE----------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVG 784 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~----------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~ 784 (929)
..++||||+++|+|.+++... ..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 163 (303)
T 2vwi_A 87 ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIA 163 (303)
T ss_dssp CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEE
Confidence 389999999999999988621 12357899999999998 99999999999999999999999
Q ss_pred ccccccccccccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHH
Q 002376 785 DFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPEL 863 (929)
Q Consensus 785 DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l 863 (929)
|||+++........ ..........||+.|+|||++.+ ..++.++||||+|++++++.....++...+.. +......
T Consensus 164 dfg~~~~~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~ 240 (303)
T 2vwi_A 164 DFGVSAFLATGGDI-TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM--KVLMLTL 240 (303)
T ss_dssp CCHHHHHCC----------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG--GHHHHHH
T ss_pred eccchheeccCCCc-cchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh--hHHHHHh
Confidence 99999865432111 11112234579999999999876 56899999999998877766555444333221 0000000
Q ss_pred HHhhcccch--hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 864 RQLMTSNES--QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 864 ~~~~~~~~~--~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
......... ............+.+++.+||+.||++||+++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 241 QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp TSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 000000000 000000001122333777999999999999999986
No 259
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.96 E-value=1.2e-31 Score=288.85 Aligned_cols=230 Identities=23% Similarity=0.303 Sum_probs=167.3
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.++|+..+.||+|+||.||+++... ..+.+.+|++++++++||||+++++++... ....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~~ 81 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR---TNTT 81 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEG---GGTE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecC---CCce
Confidence 4578899999999999999987641 235688999999999999999999987542 2345
Q ss_pred EEEEEEecCCCCccccccccc------------cccccHHHHHHHhhhCCCCC-----EEecCCCCCCeeecCCCceEEe
Q 002376 722 LALVYEFLSNGSLGDWIHGER------------KNELDITSALDYLHNDCEVP-----VVHSDLKPGNILLDEEMTAKVG 784 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~------------~~~~~ia~aL~yLH~~~~~~-----iiHrDlk~~NILl~~~~~~ki~ 784 (929)
.++||||+++|+|.+++.... .++.|++.||+|||+. + |+||||||+||+++.++.+||+
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~ 158 (279)
T 2w5a_A 82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLG 158 (279)
T ss_dssp EEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEEC
T ss_pred EEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEe
Confidence 899999999999999986321 2367899999999998 6 9999999999999999999999
Q ss_pred ccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHH
Q 002376 785 DFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELR 864 (929)
Q Consensus 785 DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 864 (929)
|||+++..... ........||+.|+|||++.+..++.++||||+|++++++.....++..... .++. ..+.
T Consensus 159 dfg~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~-~~i~ 229 (279)
T 2w5a_A 159 DFGLARILNHD------TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELA-GKIR 229 (279)
T ss_dssp CCCHHHHC---------CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH-HHHH
T ss_pred cCchheeeccc------cccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--HHHH-HHHh
Confidence 99999865321 1112335789999999999999999999999999877766544333322211 1111 1111
Q ss_pred HhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 002376 865 QLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRL 910 (929)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L 910 (929)
.... .......++ .+.+++.+||+.||++||+++|+++.+
T Consensus 230 ~~~~--~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 230 EGKF--RRIPYRYSD----ELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp HTCC--CCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred hccc--ccCCcccCH----HHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 1000 000111112 233377799999999999999998754
No 260
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.96 E-value=4.8e-31 Score=287.84 Aligned_cols=226 Identities=23% Similarity=0.272 Sum_probs=168.9
Q ss_pred hCCCCCceeecccCceeEEecccc-----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT-----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~-----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
.+.|+..+.||+|+||.||+|... ...+.+.+|+.++++++||||+++++++... ...
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 95 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD-----TKL 95 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-----CeE
Confidence 356888999999999999998653 1246789999999999999999999998643 348
Q ss_pred EEEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
++||||+++++|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 96 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 96 WIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp EEEEECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred EEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcc
Confidence 99999999999999886432 3467899999999998 9999999999999999999999999999865322
Q ss_pred cCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTI 875 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 875 (929)
. .......||+.|+|||++.+..++.++||||+|++++++.....++..... .+.. ..+..... .....
T Consensus 173 ~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~-~~~~~~~~--~~~~~ 241 (303)
T 3a7i_A 173 Q------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP--MKVL-FLIPKNNP--PTLEG 241 (303)
T ss_dssp B------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHH-HHHHHSCC--CCCCS
T ss_pred c------cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH--HHHH-HHhhcCCC--CCCcc
Confidence 1 112345789999999999999999999999999877765544333322211 0000 00111000 00001
Q ss_pred hhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 876 QLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 876 ~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
. ....+.+++.+||+.||++|||++|+++
T Consensus 242 ~----~~~~l~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 242 N----YSKPLKEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp S----CCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred c----cCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 1 1122333777999999999999999975
No 261
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.96 E-value=8.3e-32 Score=301.50 Aligned_cols=236 Identities=20% Similarity=0.271 Sum_probs=152.2
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCC-CCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS-KNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-~~~~ 720 (929)
.++|+..+.||+|+||.||+|.... ..+.+.+|+++++.++||||+++++++..... ....
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 4689999999999999999996531 23577899999999999999999999865321 1224
Q ss_pred eEEEEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
..|+||||+ +++|.++++..+ .++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred eEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 479999999 789999886432 3467999999999998 99999999999999999999999999998643
Q ss_pred cccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhh-------------
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQ------------- 857 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~------------- 857 (929)
. .....+||+.|+|||++.+ ..++.++||||+|++++++..+..++..... .+..
T Consensus 184 ~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~ 254 (367)
T 2fst_X 184 D---------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred c---------cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 1 1234579999999999887 6789999999999888776655444322211 0000
Q ss_pred --ccChHHHHhhcccch-hhhhhh---HHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 858 --VLDPELRQLMTSNES-QTIQLH---DCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 858 --~~~~~l~~~~~~~~~-~~~~~~---~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
+.............. ...... ......+.+++.+|++.||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp TTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 001111110000000 000000 001122334888999999999999999985
No 262
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=8e-30 Score=278.60 Aligned_cols=255 Identities=24% Similarity=0.280 Sum_probs=181.6
Q ss_pred CCCCCCcceeeCCCCCcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCC-
Q 002376 56 SSPCTWPGVICNNFGNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGE- 134 (929)
Q Consensus 56 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~- 134 (929)
...|.|.+|.|+..+ ++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|+++..
T Consensus 4 ~C~C~~~~l~c~~~~------------l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 68 (306)
T 2z66_A 4 RCSCSGTEIRCNSKG------------LT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKG 68 (306)
T ss_dssp TCEEETTEEECCSSC------------CS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEE
T ss_pred CCeeCCCEEEcCCCC------------cc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCccc
Confidence 445899999887532 33 4555443 6899999999999855555689999999999999999843
Q ss_pred -cccccccccccceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCC
Q 002376 135 -LPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLA 213 (929)
Q Consensus 135 -~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~ 213 (929)
.|..+..+++|++|+|++|.++ .++.. +..+++|++|++++|++.+..+ ...|..+++|++|+|++|++.
T Consensus 69 ~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~-~~~l~~L~~L~l~~n~l~~~~~-------~~~~~~l~~L~~L~l~~n~l~ 139 (306)
T 2z66_A 69 CCSQSDFGTTSLKYLDLSFNGVI-TMSSN-FLGLEQLEHLDFQHSNLKQMSE-------FSVFLSLRNLIYLDISHTHTR 139 (306)
T ss_dssp EEEHHHHSCSCCCEEECCSCSEE-EEEEE-EETCTTCCEEECTTSEEESSTT-------TTTTTTCTTCCEEECTTSCCE
T ss_pred CcccccccccccCEEECCCCccc-cChhh-cCCCCCCCEEECCCCccccccc-------chhhhhccCCCEEECCCCcCC
Confidence 3677778999999999999998 56665 8889999999999998754322 145778889999999999998
Q ss_pred CccCCccccCCCCceEEeeecCCCC-cCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCC
Q 002376 214 GTVPSTIYNMTSLVHLRLASNQLGG-EIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPG 292 (929)
Q Consensus 214 ~~~p~~~~~l~~L~~L~Ls~N~l~~-~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 292 (929)
+..+..|.++++|++|+|++|.+++ .+|..+. .+++|+.|++++|++++..|..+..+++|+.|+|++|.+++..+..
T Consensus 140 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 218 (306)
T 2z66_A 140 VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT-ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFP 218 (306)
T ss_dssp ECSTTTTTTCTTCCEEECTTCEEGGGEECSCCT-TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGG
T ss_pred ccchhhcccCcCCCEEECCCCccccccchhHHh-hCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhh
Confidence 8888888889999999999888875 2443333 3666666666666666666666666666666666666666555545
Q ss_pred CCCCCccceeccccccccCCCCCCCCccccccCCC-CCCCEEEccCCcccc
Q 002376 293 LGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNS-THLNYLALDGNQFEG 342 (929)
Q Consensus 293 ~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l-~~L~~L~Ls~N~l~~ 342 (929)
|..+++|+.|++++|++..... ..+..+ ++|++|+|++|.+++
T Consensus 219 ~~~l~~L~~L~L~~N~l~~~~~-------~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 219 YKCLNSLQVLDYSLNHIMTSKK-------QELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp GTTCTTCCEEECTTSCCCBCSS-------SSCCCCCTTCCEEECTTCCEEC
T ss_pred ccCcccCCEeECCCCCCcccCH-------HHHHhhhccCCEEEccCCCeec
Confidence 5555555555555555544322 223333 255555555555553
No 263
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.96 E-value=9.4e-32 Score=306.01 Aligned_cols=176 Identities=26% Similarity=0.345 Sum_probs=128.0
Q ss_pred CCC-ceeecccCceeEEecccc----------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcceEEEE
Q 002376 663 FSH-ENLIGSGSFGSVLHNERT----------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 663 ~~~-~~~iG~G~~g~Vy~~~~~----------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV 725 (929)
|.. .++||+|+||.||+|++. ...+.+.+|++++++++|||||++++++... .....++|
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~---~~~~~~lv 98 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSH---ADRKVWLL 98 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEET---TTTEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecC---CCCeEEEE
Confidence 444 468999999999999843 1235788999999999999999999998642 23458999
Q ss_pred EEecCCCCccccccc-----------------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeee----cCCCceEEe
Q 002376 726 YEFLSNGSLGDWIHG-----------------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILL----DEEMTAKVG 784 (929)
Q Consensus 726 ~e~~~~gsL~~~l~~-----------------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl----~~~~~~ki~ 784 (929)
|||++ |+|.+++.. .+.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+
T Consensus 99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 99996 588777642 123467999999999998 99999999999999 778899999
Q ss_pred ccccccccccccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 785 DFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 785 DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
|||+|+....... ........+||+.|+|||++.+. .++.++||||+|++++++.....++
T Consensus 175 Dfg~a~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf 236 (405)
T 3rgf_A 175 DMGFARLFNSPLK---PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236 (405)
T ss_dssp CTTCCC-------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred ECCCceecCCCCc---ccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCC
Confidence 9999987642211 11123346899999999999875 4899999999998888876655444
No 264
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.96 E-value=5.4e-32 Score=308.94 Aligned_cols=237 Identities=21% Similarity=0.278 Sum_probs=162.8
Q ss_pred CCCCCceeecccCceeEEeccccC------------cHHHHHHHHHHHHccCCccccceeeecccCCC-CCcceEEEEEE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS-KNMEFLALVYE 727 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-~~~~~~~lV~e 727 (929)
.+|+..+.||+|+||+||+|++.. ..+.+.+|++++++++|||||+++++|..... ....+.++|||
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e 133 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 133 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehh
Confidence 468889999999999999998752 12334579999999999999999999865432 23345789999
Q ss_pred ecCCCCccccccc------------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC-CceEEecccccccccc
Q 002376 728 FLSNGSLGDWIHG------------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE-MTAKVGDFGLARFLLE 794 (929)
Q Consensus 728 ~~~~gsL~~~l~~------------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~-~~~ki~DfGla~~~~~ 794 (929)
|+++ ++.+.+.. .+.++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+|+.+..
T Consensus 134 ~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 134 YVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp CCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred cccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 9975 56555431 123467999999999998 99999999999999965 5789999999986532
Q ss_pred ccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhccC-------hHHH
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQVLD-------PELR 864 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~~~-------~~l~ 864 (929)
. ......+||+.|+|||++.+. .++.++||||+|+++|++..+..++..... .+.+++. ..+.
T Consensus 210 ~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 210 G-------EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp T-------CCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred C-------CCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 1 112235789999999998775 699999999999888777655444332211 1111110 0000
Q ss_pred Hhhcccc----------hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 865 QLMTSNE----------SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 865 ~~~~~~~----------~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
....... .........+...+.+++.+||+.||++|||+.|+++
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 0000000 0000000011122334788999999999999999985
No 265
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.96 E-value=3.4e-31 Score=284.87 Aligned_cols=224 Identities=26% Similarity=0.322 Sum_probs=159.1
Q ss_pred hCCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.++|...+.||+|+||.||+|+... ..+.+.+|+++++.++||||+++++++... .
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 84 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTP-----T 84 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----S
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecC-----C
Confidence 4678899999999999999987641 134688999999999999999999998543 3
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
..++||||+++++|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 161 (276)
T 2h6d_A 85 DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMM 161 (276)
T ss_dssp EEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred eEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeeccccccc
Confidence 4899999999999999986432 3467899999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCCC-CCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGERP-STAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNE 871 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 871 (929)
... .......||+.|+|||++.+..+ +.++||||+|++++++.....++.... ..+... .+... ..
T Consensus 162 ~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~-~~~~~---~~ 228 (276)
T 2h6d_A 162 SDG-------EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH--VPTLFK-KIRGG---VF 228 (276)
T ss_dssp CC--------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHH-HHHHC---CC
T ss_pred CCC-------cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc--HHHHHH-HhhcC---cc
Confidence 321 11223478999999999988775 689999999977666544333222111 111111 11110 00
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 872 SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 872 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
... +.+...+.+++.+|++.||++|||++|+++
T Consensus 229 ~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 229 YIP----EYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp CCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCc----hhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 001 111122334777999999999999999986
No 266
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.96 E-value=7.6e-31 Score=288.93 Aligned_cols=228 Identities=21% Similarity=0.222 Sum_probs=162.5
Q ss_pred hCCCCCceeecccCceeEEeccccCc------------------------HHHHHHHHHHHHccCCccccceeeecccCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTGS------------------------WKSFIAECETLRNVRHRNLVKLITSCSSLD 715 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~~------------------------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~ 715 (929)
.++|...+.||+|+||.||+|..... ...+.+|++++++++||||+++++++...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~- 87 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE- 87 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS-
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC-
Confidence 35788999999999999999865411 12478999999999999999999998432
Q ss_pred CCCcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCc---eEEe
Q 002376 716 SKNMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMT---AKVG 784 (929)
Q Consensus 716 ~~~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~---~ki~ 784 (929)
..++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++. +||+
T Consensus 88 -----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 88 -----DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp -----SEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred -----ceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEc
Confidence 2799999999999999886433 2367899999999998 9999999999999987654 9999
Q ss_pred ccccccccccccCCCCCccccceeccccccccccccC---CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccCh
Q 002376 785 DFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGL---GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDP 861 (929)
Q Consensus 785 DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (929)
|||+++..... .......||+.|+|||++. ...++.++||||+|++++++.....++...... ..+..
T Consensus 160 Dfg~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~ 230 (322)
T 2ycf_A 160 DFGHSKILGET-------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--VSLKD 230 (322)
T ss_dssp CCTTCEECCCC-------HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS--SCHHH
T ss_pred cCccceecccc-------cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH--HHHHH
Confidence 99999865321 1123457999999999973 567899999999998777655443333221110 00001
Q ss_pred HHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 862 ELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 862 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.+... ...........+...+.+++.+||+.||++||+++|+++
T Consensus 231 ~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 231 QITSG---KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHHHT---CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHhC---ccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 11110 000000111111222334777999999999999999984
No 267
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.96 E-value=5.1e-31 Score=307.24 Aligned_cols=227 Identities=23% Similarity=0.305 Sum_probs=168.1
Q ss_pred hCCCCCceeecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.++|+..+.||+|+||.||+|+.. ...+.+.+|++++++++|||||++++++.. ..
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~ 99 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED-----KG 99 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SS
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----CC
Confidence 347888999999999999988754 235678999999999999999999999854 34
Q ss_pred eEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeee---cCCCceEEeccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILL---DEEMTAKVGDFGLA 789 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl---~~~~~~ki~DfGla 789 (929)
..++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+|
T Consensus 100 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 100 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp EEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 5899999999999998886433 3467899999999998 99999999999999 56789999999999
Q ss_pred cccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcc
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTS 869 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 869 (929)
+..... ......+||+.|+|||++.+ .++.++||||+|+++|++.....++..... .+++........
T Consensus 177 ~~~~~~-------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~~~~-- 244 (484)
T 3nyv_A 177 THFEAS-------KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE--YDILKKVEKGKY-- 244 (484)
T ss_dssp HHBCCC-------CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC--
T ss_pred EEcccc-------cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHcCCC--
Confidence 865321 12234579999999999876 699999999999877765544433322211 111111111110
Q ss_pred cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 870 NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
....+.+..++..+++++.+|++.||++|||++|+++
T Consensus 245 --~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 245 --TFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp --CCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --CCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 0111111122233344777999999999999999985
No 268
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=3.5e-29 Score=275.79 Aligned_cols=227 Identities=21% Similarity=0.291 Sum_probs=206.6
Q ss_pred CCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEE
Q 002376 327 STHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVL 406 (929)
Q Consensus 327 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 406 (929)
.++++.|+|++|+++ .+|..++.+. +|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..++.+++|++|
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~-~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLS-HLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGT-TCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCC-CCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 468899999999998 7888888876 7999999999999 78889999999999999999998 778899999999999
Q ss_pred EecCCcCCCCCcccccC---------CCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhh
Q 002376 407 GLAGNEIPGGIPNSLAN---------LKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEI 477 (929)
Q Consensus 407 ~L~~N~l~~~~p~~~~~---------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~ 477 (929)
+|++|++.+.+|..+.. +++|++|+|++|+++ .+|..|.++++|++|+|++|++++ + |..+
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l--------~~~l 225 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-L--------GPAI 225 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-C--------CGGG
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-C--------chhh
Confidence 99999888888887664 999999999999998 788889999999999999999974 3 6678
Q ss_pred hcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCe
Q 002376 478 SRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRS 557 (929)
Q Consensus 478 ~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 557 (929)
..+++|++|+|++|++.+.+|..|+++++|++|+|++|++.+.+|..++.+++|++|+|++|++.+.+|..+.++++|+.
T Consensus 226 ~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~ 305 (328)
T 4fcg_A 226 HHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCI 305 (328)
T ss_dssp GGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCE
T ss_pred ccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCcCcc
Q 002376 558 LNLTFNNLEG 567 (929)
Q Consensus 558 L~Ls~N~l~~ 567 (929)
+++..|.+..
T Consensus 306 l~l~~~~~~~ 315 (328)
T 4fcg_A 306 ILVPPHLQAQ 315 (328)
T ss_dssp EECCGGGSCC
T ss_pred EeCCHHHHHH
Confidence 9998777654
No 269
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=1.4e-29 Score=299.94 Aligned_cols=294 Identities=25% Similarity=0.328 Sum_probs=161.7
Q ss_pred CCCCCCCCCCCCCCCCCcceeeC------CCCCcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCC
Q 002376 45 PSSPLSYWNPSSSPCTWPGVICN------NFGNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNL 118 (929)
Q Consensus 45 ~~~~l~~w~~~~~~c~w~gv~c~------~~~~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l 118 (929)
....+++|..+.+||.|+|..|. .....++.|++++++++ .+|..+. ++|++|+|++|+|+ .+|. .+
T Consensus 8 ~~~~w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l 80 (622)
T 3g06_A 8 YDAVWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LP 80 (622)
T ss_dssp --CHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CC
T ss_pred HHHHHHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cC
Confidence 45566788878889999775321 11123667777777777 6666665 67777777777776 4554 45
Q ss_pred CCCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCC
Q 002376 119 FRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSR 198 (929)
Q Consensus 119 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~ 198 (929)
++|++|+|++|+|++ +|. .+++|++|+|++|+|+ .+|. .+++|+.|++++|++++ +|. .
T Consensus 81 ~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~-~l~~----~l~~L~~L~L~~N~l~~-lp~-----------~ 139 (622)
T 3g06_A 81 PELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLT-HLPA----LPSGLCKLWIFGNQLTS-LPV-----------L 139 (622)
T ss_dssp TTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCC-CCCC----CCTTCCEEECCSSCCSC-CCC-----------C
T ss_pred CCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCC-CCCC----CCCCcCEEECCCCCCCc-CCC-----------C
Confidence 677777777777763 443 5566677777777666 3443 34556666666665532 221 1
Q ss_pred CCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEE
Q 002376 199 LENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQII 278 (929)
Q Consensus 199 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L 278 (929)
+++|++|+|++|+++++ |. .+.+|+.|++++|+|+ + +| ..+++|+.|
T Consensus 140 l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~-------------------------~-l~---~~~~~L~~L 186 (622)
T 3g06_A 140 PPGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLT-------------------------S-LP---MLPSGLQEL 186 (622)
T ss_dssp CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCS-------------------------C-CC---CCCTTCCEE
T ss_pred CCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCC-------------------------C-Cc---ccCCCCcEE
Confidence 24455555555554432 21 1233444444444443 2 12 123445555
Q ss_pred eccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEE
Q 002376 279 RMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKL 358 (929)
Q Consensus 279 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L 358 (929)
++++|.|++ +|.. .++|+.|++++|.++ .+|..+ .+|+.|
T Consensus 187 ~Ls~N~l~~-l~~~----------------------------------~~~L~~L~L~~N~l~-~l~~~~----~~L~~L 226 (622)
T 3g06_A 187 SVSDNQLAS-LPTL----------------------------------PSELYKLWAYNNRLT-SLPALP----SGLKEL 226 (622)
T ss_dssp ECCSSCCSC-CCCC----------------------------------CTTCCEEECCSSCCS-SCCCCC----TTCCEE
T ss_pred ECCCCCCCC-CCCc----------------------------------cchhhEEECcCCccc-ccCCCC----CCCCEE
Confidence 555555543 2210 134555555555554 233211 246666
Q ss_pred EecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccc
Q 002376 359 YLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELT 438 (929)
Q Consensus 359 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 438 (929)
+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|..+.++++|+.|+|++|.++
T Consensus 227 ~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~ 297 (622)
T 3g06_A 227 IVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLS 297 (622)
T ss_dssp ECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCC
T ss_pred EccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCC
Confidence 666666654 33 33456666666666666 3343 4556666666666666 45566666666666666666666
Q ss_pred cccCcccccc
Q 002376 439 GEIPISFGNF 448 (929)
Q Consensus 439 ~~~p~~~~~l 448 (929)
+..|..|..+
T Consensus 298 ~~~~~~l~~L 307 (622)
T 3g06_A 298 ERTLQALREI 307 (622)
T ss_dssp HHHHHHHHHH
T ss_pred CcCHHHHHhc
Confidence 6655554443
No 270
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.2e-29 Score=283.24 Aligned_cols=273 Identities=20% Similarity=0.269 Sum_probs=170.3
Q ss_pred EEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhcccccc
Q 002376 277 IIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELS 356 (929)
Q Consensus 277 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~ 356 (929)
..++++|.++ .+|..+. ++|++|++++|++..++. ..+.++++|++|+|++|++++..|..+..+. +|+
T Consensus 35 ~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~-------~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~ 103 (353)
T 2z80_A 35 ICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISN-------SDLQRCVNLQALVLTSNGINTIEEDSFSSLG-SLE 103 (353)
T ss_dssp EEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECT-------TTTTTCTTCCEEECTTSCCCEECTTTTTTCT-TCC
T ss_pred EeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCH-------HHhccCCCCCEEECCCCccCccCHhhcCCCC-CCC
Confidence 3455555554 2333322 245555555555544322 2345555666666666666655555555554 566
Q ss_pred EEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccC-ccccCCCCCCEEEecCC-cCCCCCcccccCCCCCceecccC
Q 002376 357 KLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIP-IEIGQLQGLQVLGLAGN-EIPGGIPNSLANLKKLNQIDLSG 434 (929)
Q Consensus 357 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~ 434 (929)
+|+|++|+|++..+..|+++++|++|+|++|++++..+ ..+..+++|++|++++| .+.+..+..|.++++|++|++++
T Consensus 104 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~ 183 (353)
T 2z80_A 104 HLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDA 183 (353)
T ss_dssp EEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEE
T ss_pred EEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCC
Confidence 66666666665444446666666666666666664333 35666666666666666 35555556666777777777777
Q ss_pred cccccccCcccccccccceecccCCcCCCCCCCCcccCCch-hhhcccCccEEEecCCCCCCCCCcchh---cCcCccee
Q 002376 435 NELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPE-EISRLENVVTIDLSDNSLSGNLPNSLK---NCKSLEEL 510 (929)
Q Consensus 435 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~-~~~~l~~L~~LdLs~N~l~~~~p~~~~---~l~~L~~L 510 (929)
|++++..|..|.++++|++|++++|+++. + |. .+..+++|+.|+|++|++++..+..+. ....++.+
T Consensus 184 n~l~~~~~~~l~~l~~L~~L~l~~n~l~~-~--------~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l 254 (353)
T 2z80_A 184 SDLQSYEPKSLKSIQNVSHLILHMKQHIL-L--------LEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKF 254 (353)
T ss_dssp TTCCEECTTTTTTCSEEEEEEEECSCSTT-H--------HHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEE
T ss_pred CCcCccCHHHHhccccCCeecCCCCcccc-c--------hhhhhhhcccccEEECCCCccccccccccccccccchhhcc
Confidence 77776667777777777777777777642 2 32 234466777777777777765544332 34566777
Q ss_pred ecccccccc----cCCccccCCCCCCEEECCCCcCCCcCCcc-cccCCCCCeEeCCCCcCcccCC
Q 002376 511 LMAYNQFSG----PIPNIVAELKGLEVLDLSSNKLSGSIPSD-LQNLQALRSLNLTFNNLEGVVP 570 (929)
Q Consensus 511 ~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p 570 (929)
+|++|.+++ .+|..+..+++|+.|||++|+++. +|.. |.++++|++|+|++|++++..|
T Consensus 255 ~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~-i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 255 TFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp EEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccccccccCcchhhhHHHHhcccCCCEEECCCCCCCc-cCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 777777765 367778888888888888888884 5544 5888888888888888887655
No 271
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.96 E-value=5e-32 Score=299.62 Aligned_cols=175 Identities=27% Similarity=0.390 Sum_probs=138.5
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.++|+..+.||+|+||.||+|+... ..+.+.+|++++++++||||+++++++.. ...
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~ 98 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK-----KKR 98 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec-----CCE
Confidence 3578889999999999999987651 13457899999999999999999999854 334
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLL 793 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~ 793 (929)
.++||||+++++|.++..... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 99 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 99 WYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp EEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred EEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 899999999998888764322 3467999999999998 99999999999999999999999999998653
Q ss_pred cccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
... .......||+.|+|||++.+. .++.++||||+|++++++.....++
T Consensus 176 ~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf 225 (331)
T 4aaa_A 176 APG------EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLF 225 (331)
T ss_dssp --------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred CCc------cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCC
Confidence 211 112334789999999999876 6899999999998877765554333
No 272
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.96 E-value=2.4e-31 Score=287.64 Aligned_cols=219 Identities=20% Similarity=0.230 Sum_probs=160.0
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~ 720 (929)
.++|+..+.||+|+||.||+|+... ...++.+|+..+.++ +||||+++++++.+. .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~-----~ 84 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAED-----D 84 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEET-----T
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecC-----C
Confidence 4678899999999999999987641 245788999999999 999999999998543 3
Q ss_pred eEEEEEEecCCCCcccccccc------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC-----------
Q 002376 721 FLALVYEFLSNGSLGDWIHGE------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE----------- 777 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~----------- 777 (929)
..++||||+++|+|.+++... ..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~ 161 (289)
T 1x8b_A 85 HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEG 161 (289)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC------------
T ss_pred eEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccc
Confidence 589999999999999998642 12367999999999998 9999999999999984
Q ss_pred --------CCceEEeccccccccccccCCCCCccccceeccccccccccccCCC-CCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 778 --------EMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 778 --------~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
...+||+|||.++.... .....||+.|+|||++.+. .++.++||||+|++++++..
T Consensus 162 ~~~~~~~~~~~~kl~Dfg~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~----- 226 (289)
T 1x8b_A 162 DEDDWASNKVMFKIGDLGHVTRISS----------PQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAG----- 226 (289)
T ss_dssp --------CCCEEECCCTTCEETTC----------SCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTT-----
T ss_pred ccccccCCceEEEEcccccccccCC----------ccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhc-----
Confidence 44799999999986532 1123589999999999876 56789999999977665432
Q ss_pred hcCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 849 SNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 849 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
+..+....+.. ..+..... ...... +...+.+++.+||+.||++|||++|+++
T Consensus 227 ~~~~~~~~~~~-~~~~~~~~--~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 227 AEPLPRNGDQW-HEIRQGRL--PRIPQV----LSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp CCCCCSSSHHH-HHHHTTCC--CCCSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCCcchhHH-HHHHcCCC--CCCCcc----cCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 22111000000 00111000 000111 1222333777999999999999999875
No 273
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.96 E-value=1.6e-30 Score=304.25 Aligned_cols=228 Identities=22% Similarity=0.255 Sum_probs=165.5
Q ss_pred hhCCCCCceeecccCceeEEeccccC-----------------------------cHHHHHHHHHHHHccCCccccceee
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG-----------------------------SWKSFIAECETLRNVRHRNLVKLIT 709 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------------------~~~~~~~E~~~l~~l~Hpniv~l~~ 709 (929)
..++|...+.||+|+||.||+|+... ..+.+.+|+.++++++|||||++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 35689999999999999999887541 1346889999999999999999999
Q ss_pred ecccCCCCCcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC--
Q 002376 710 SCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM-- 779 (929)
Q Consensus 710 ~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~-- 779 (929)
+|.+ ....|+|||||++|+|.+++.... .++.|++.||+|||+. +|+||||||+|||++.++
T Consensus 114 ~~~~-----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 185 (504)
T 3q5i_A 114 VFED-----KKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSL 185 (504)
T ss_dssp EEEC-----SSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCC
T ss_pred EEEc-----CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCC
Confidence 9954 345899999999999998885332 3467999999999998 999999999999998776
Q ss_pred -ceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhc
Q 002376 780 -TAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQV 858 (929)
Q Consensus 780 -~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~ 858 (929)
.+||+|||+|+..... ......+||+.|+|||++. +.++.++||||+|+++|++..+..++..... .++
T Consensus 186 ~~~kl~Dfg~a~~~~~~-------~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~ 255 (504)
T 3q5i_A 186 LNIKIVDFGLSSFFSKD-------YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND--QDI 255 (504)
T ss_dssp SSEEECCCTTCEECCTT-------SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHH
T ss_pred ccEEEEECCCCEEcCCC-------CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHH
Confidence 6999999999865321 1223457999999999986 4699999999999877765544333322211 111
Q ss_pred cChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 859 LDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 859 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
+...... ........+..++..+++++.+|++.||++|||++|+++
T Consensus 256 ~~~i~~~----~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 256 IKKVEKG----KYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHHHHHC----CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHcC----CCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1111111 000011111112223344777999999999999999974
No 274
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.96 E-value=3.4e-31 Score=295.73 Aligned_cols=245 Identities=22% Similarity=0.279 Sum_probs=168.7
Q ss_pred hCCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
.++|+..+.||+|+||.||+|++.. ....+.+|++++++++||||+++++++...........
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 4689999999999999999987651 13467899999999999999999999876443344568
Q ss_pred EEEEEecCCCCcccccccc-------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGE-------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~-------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
++||||++ |+|.+++... ..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165 (353)
T ss_dssp EEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence 99999997 6898887642 23467999999999998 9999999999999999999999999999876432
Q ss_pred cCCCCC----ccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhhhcCCch----------------
Q 002376 796 VDNQSS----ISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVESNLPEN---------------- 854 (929)
Q Consensus 796 ~~~~~~----~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~---------------- 854 (929)
...... .......+||+.|+|||++.+ ..++.++||||+|++++++.....++......
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
T 2b9h_A 166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245 (353)
T ss_dssp --------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCST
T ss_pred cccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchh
Confidence 111110 011234578999999998764 67899999999998877765444333222110
Q ss_pred --hhhccChHHHHhhcccch---h-hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 855 --VLQVLDPELRQLMTSNES---Q-TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 855 --~~~~~~~~l~~~~~~~~~---~-~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.................. . .......+...+.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000011111111100000 0 00000011222334777999999999999999986
No 275
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.96 E-value=7.4e-31 Score=286.62 Aligned_cols=228 Identities=20% Similarity=0.307 Sum_probs=162.3
Q ss_pred hCCCCCceeecccCceeEEeccccC--------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG--------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~--------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~ 719 (929)
.++|+..+.||+|+||.||++.... ..+.+.+|++++++++||||+++++++...+ .
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~ 80 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEE---K 80 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-----
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC---C
Confidence 4689999999999999999987641 2356889999999999999999999985422 2
Q ss_pred ceEEEEEEecCCCCcccccccc----------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 720 EFLALVYEFLSNGSLGDWIHGE----------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~~~----------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
...++||||+++| +.+++... ..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 81 ~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~ 156 (305)
T 2wtk_C 81 QKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVA 156 (305)
T ss_dssp -CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred CeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccc
Confidence 3589999999876 66665421 12367899999999998 9999999999999999999999999999
Q ss_pred cccccccCCCCCccccceeccccccccccccCCCC--CCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhh
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER--PSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLM 867 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 867 (929)
+...... .........||+.|+|||++.+.. ++.++||||+|++++++.....++.... ..+... .+..
T Consensus 157 ~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~-~i~~-- 227 (305)
T 2wtk_C 157 EALHPFA----ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN--IYKLFE-NIGK-- 227 (305)
T ss_dssp EECCTTC----SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHH-HHHH--
T ss_pred cccCccc----cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch--HHHHHH-HHhc--
Confidence 8653211 111223456999999999988654 3789999999977766554433322111 111111 1111
Q ss_pred cccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 868 TSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.........++ .+.+++.+||+.||++|||++|+++
T Consensus 228 -~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 228 -GSYAIPGDCGP----PLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp -CCCCCCSSSCH----HHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -CCCCCCCccCH----HHHHHHHHHccCChhhCCCHHHHhc
Confidence 00011111112 2233777999999999999999985
No 276
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.96 E-value=2.2e-31 Score=304.64 Aligned_cols=169 Identities=26% Similarity=0.350 Sum_probs=139.2
Q ss_pred hCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHcc------CCccccceeeecccCCCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNV------RHRNLVKLITSCSSLDSKN 718 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l------~Hpniv~l~~~~~~~~~~~ 718 (929)
..+|+..+.||+|+||.||+|.... ..+.+.+|+++++.+ +|+||+++++++...
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~---- 171 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR---- 171 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET----
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC----
Confidence 4578999999999999999996652 135677899888887 577999999998543
Q ss_pred cceEEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCc--eEEecc
Q 002376 719 MEFLALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMT--AKVGDF 786 (929)
Q Consensus 719 ~~~~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~--~ki~Df 786 (929)
...++||||++ |+|.+++.... .++.||+.||+|||+. +|+||||||+|||++.++. +||+||
T Consensus 172 -~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DF 246 (429)
T 3kvw_A 172 -NHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDF 246 (429)
T ss_dssp -TEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred -CeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeec
Confidence 45899999996 68988876432 3467999999999998 9999999999999999887 999999
Q ss_pred ccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHH
Q 002376 787 GLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKW 846 (929)
Q Consensus 787 Gla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~ 846 (929)
|+|+.... .....+||+.|||||++.+..++.++||||+|++++++.....
T Consensus 247 G~a~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~ 297 (429)
T 3kvw_A 247 GSSCYEHQ---------RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297 (429)
T ss_dssp TTCEETTC---------CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred ccceecCC---------cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCC
Confidence 99975421 1223578999999999999999999999999988887665543
No 277
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.96 E-value=2.7e-31 Score=292.03 Aligned_cols=242 Identities=24% Similarity=0.292 Sum_probs=161.2
Q ss_pred hCCCCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCccccceeeecccCCC-------
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS------- 716 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~------- 716 (929)
.++|+..+.||+|+||.||+|.... ..+++.+|++++++++||||+++++++.....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 3578899999999999999987652 24578899999999999999999998754321
Q ss_pred --CCcceEEEEEEecCCCCccccccccc-------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeec-CCCceEEecc
Q 002376 717 --KNMEFLALVYEFLSNGSLGDWIHGER-------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLD-EEMTAKVGDF 786 (929)
Q Consensus 717 --~~~~~~~lV~e~~~~gsL~~~l~~~~-------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~-~~~~~ki~Df 786 (929)
......++||||++ |+|.++++... .++.|++.||+|||+. +|+||||||+||+++ +++.+||+||
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEccC
Confidence 12356899999997 69999886432 3467999999999998 999999999999997 5679999999
Q ss_pred ccccccccccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-h-hhhcc----
Q 002376 787 GLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVESNLPE-N-VLQVL---- 859 (929)
Q Consensus 787 Gla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~-~~~~~---- 859 (929)
|+++........ ........||..|+|||++.+ ..++.++||||+|++++++.....++..... . ...+.
T Consensus 166 g~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 242 (320)
T 2i6l_A 166 GLARIMDPHYSH---KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIP 242 (320)
T ss_dssp TTCBCC-----------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSC
T ss_pred ccccccCCCccc---ccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 999876322111 111233467999999998865 6789999999999887776554433322221 0 00000
Q ss_pred --ChH------------HHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 860 --DPE------------LRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 860 --~~~------------l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
... +.................+...+++++.+|++.||++|||++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 000 0000000000000000112223344778999999999999999975
No 278
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.96 E-value=4.5e-31 Score=287.32 Aligned_cols=229 Identities=22% Similarity=0.252 Sum_probs=167.0
Q ss_pred hhCCCCCceeecccCceeEEeccccC-------------------------cHHHHHHHHHHHHccC-Cccccceeeecc
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG-------------------------SWKSFIAECETLRNVR-HRNLVKLITSCS 712 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~-------------------------~~~~~~~E~~~l~~l~-Hpniv~l~~~~~ 712 (929)
..++|+..+.||+|+||.||+|.... ..+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 35689999999999999999987641 1246779999999996 999999999985
Q ss_pred cCCCCCcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEe
Q 002376 713 SLDSKNMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVG 784 (929)
Q Consensus 713 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~ 784 (929)
. ....++||||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 95 ~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 166 (298)
T 1phk_A 95 T-----NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLT 166 (298)
T ss_dssp C-----SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred c-----CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEe
Confidence 4 345899999999999999986432 3367899999999998 99999999999999999999999
Q ss_pred ccccccccccccCCCCCccccceeccccccccccccC------CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhc
Q 002376 785 DFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGL------GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQV 858 (929)
Q Consensus 785 DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~ 858 (929)
|||+++..... .......||+.|+|||++. ...++.++||||+|++++++.....++..... .+.
T Consensus 167 dfg~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~ 237 (298)
T 1phk_A 167 DFGFSCQLDPG-------EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ--MLM 237 (298)
T ss_dssp CCTTCEECCTT-------CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHH
T ss_pred cccchhhcCCC-------cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH--HHH
Confidence 99999865321 1123357899999999885 45689999999999777665544333322111 111
Q ss_pred cChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 859 LDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 859 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.. .+.. .............+..+.+++.+||+.||++|||++|+++
T Consensus 238 ~~-~~~~---~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 238 LR-MIMS---GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HH-HHHH---TCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HH-HHhc---CCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 10 1111 0000000011112223334777999999999999999975
No 279
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.96 E-value=3.4e-31 Score=297.57 Aligned_cols=236 Identities=23% Similarity=0.261 Sum_probs=164.1
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCC-Ccc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSK-NME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~-~~~ 720 (929)
.++|...+.||+|+||.||+|.+.. ..+.+.+|+.++++++||||+++++++...+.. ...
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 4688899999999999999996541 135788999999999999999999999764431 112
Q ss_pred eEEEEEEecCCCCcccccccc------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGE------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
..++||||++ |+|.+++... ..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 196 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADA 196 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC-----
T ss_pred eEEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCccccccc
Confidence 3499999997 6888776532 23467999999999998 999999999999999999999999999986432
Q ss_pred ccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhc-------------
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQV------------- 858 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~------------- 858 (929)
. .....||+.|+|||++.+ ..++.++||||+|++++++.....++..... ....+
T Consensus 197 ~---------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 267 (371)
T 4exu_A 197 E---------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 267 (371)
T ss_dssp ------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred C---------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHH
Confidence 1 233578999999999887 6799999999999887776555444332211 00000
Q ss_pred -c-ChHHHHhh---cccchh-hhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 859 -L-DPELRQLM---TSNESQ-TIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 859 -~-~~~l~~~~---~~~~~~-~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
+ +....... ...... ...........+.+++.+|++.||++|||++|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 0 00000000 000000 00000011223334788999999999999999975
No 280
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.96 E-value=3.3e-31 Score=300.76 Aligned_cols=176 Identities=25% Similarity=0.378 Sum_probs=140.5
Q ss_pred hCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHccC--------CccccceeeecccCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNVR--------HRNLVKLITSCSSLDS 716 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l~--------Hpniv~l~~~~~~~~~ 716 (929)
.++|+..+.||+|+||+||+|+... ..+.+.+|++++++++ ||||+++++++....
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~- 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG- 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE-
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC-
Confidence 3679999999999999999996541 2457889999999985 888999999986432
Q ss_pred CCcceEEEEEEecCCCCcccccccc----------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC-------
Q 002376 717 KNMEFLALVYEFLSNGSLGDWIHGE----------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM------- 779 (929)
Q Consensus 717 ~~~~~~~lV~e~~~~gsL~~~l~~~----------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~------- 779 (929)
......++||||+ +|++.+++... +.++.|++.||+|||+.+ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhh
Confidence 1344689999999 56666655422 234679999999999853 799999999999999775
Q ss_pred ------------------------------------------ceEEeccccccccccccCCCCCccccceeccccccccc
Q 002376 780 ------------------------------------------TAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPP 817 (929)
Q Consensus 780 ------------------------------------------~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aP 817 (929)
.+||+|||+|+..... ....+||+.||||
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---------~~~~~gt~~y~aP 262 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---------FTEDIQTRQYRSL 262 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---------SCSCCSCGGGCCH
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---------CccCCCCCcccCC
Confidence 7999999999865321 2234789999999
Q ss_pred cccCCCCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 818 EYGLGERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 818 E~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
|++.+..++.++||||+|++++++.....++
T Consensus 263 E~~~~~~~~~~~DiwslG~il~elltg~~pf 293 (397)
T 1wak_A 263 EVLIGSGYNTPADIWSTACMAFELATGDYLF 293 (397)
T ss_dssp HHHHTSCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred hhhcCCCCCcHHHHHHHHHHHHHHhhCCCCC
Confidence 9999999999999999998888766655444
No 281
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.96 E-value=3.7e-31 Score=296.25 Aligned_cols=185 Identities=24% Similarity=0.355 Sum_probs=134.0
Q ss_pred hHHHHHhhCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHccCCccccceeeecccCCC-
Q 002376 653 YDELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS- 716 (929)
Q Consensus 653 ~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~- 716 (929)
-.+.....++|+..+.||+|+||.||+|++.. ..+.+.+|++.++.++||||+++++++...+.
T Consensus 15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 15 DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp SHHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 35667778999999999999999999987651 13467788888999999999999999876432
Q ss_pred -CCcceEEEEEEecCCCCcccccc----cc--------ccccccHHHHHHHhh--hCCCCCEEecCCCCCCeeecC-CCc
Q 002376 717 -KNMEFLALVYEFLSNGSLGDWIH----GE--------RKNELDITSALDYLH--NDCEVPVVHSDLKPGNILLDE-EMT 780 (929)
Q Consensus 717 -~~~~~~~lV~e~~~~gsL~~~l~----~~--------~~~~~~ia~aL~yLH--~~~~~~iiHrDlk~~NILl~~-~~~ 780 (929)
....+.++||||+++ ++.+.+. .. ..++.|++.|++||| +. +|+||||||+|||++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCc
Confidence 223457899999986 4443332 11 134678999999999 66 9999999999999996 899
Q ss_pred eEEeccccccccccccCCCCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCcchhHHhh
Q 002376 781 AKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 781 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
+||+|||+++..... .......||+.|+|||++.+.. ++.++||||+|++++++.....++
T Consensus 171 ~kl~Dfg~a~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf 232 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPS-------EPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF 232 (360)
T ss_dssp EEECCCTTCBCCCTT-------SCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred EEEeeCCCceecCCC-------CCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCc
Confidence 999999999865322 1122347899999999987655 899999999998877765554443
No 282
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.96 E-value=3.5e-31 Score=292.13 Aligned_cols=238 Identities=26% Similarity=0.341 Sum_probs=168.8
Q ss_pred HhhCCCCCceeecccCceeEEecccc-C------------------cHHHHHHHHHHHHcc---CCccccceeeecccCC
Q 002376 658 RATGNFSHENLIGSGSFGSVLHNERT-G------------------SWKSFIAECETLRNV---RHRNLVKLITSCSSLD 715 (929)
Q Consensus 658 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~------------------~~~~~~~E~~~l~~l---~Hpniv~l~~~~~~~~ 715 (929)
++.++|+..+.||+|+||.||+|++. . ....+.+|+.+++.+ +||||+++++++....
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 45678999999999999999999762 0 123577888887776 8999999999986433
Q ss_pred CCCcceEEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEec
Q 002376 716 SKNMEFLALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGD 785 (929)
Q Consensus 716 ~~~~~~~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~D 785 (929)
.......++||||++ |+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEec
Confidence 234456899999997 69999886432 2367899999999998 999999999999999999999999
Q ss_pred cccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHH
Q 002376 786 FGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQ 865 (929)
Q Consensus 786 fGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 865 (929)
||+++..... .......||+.|+|||++.+..++.++||||+|++++++.....++..... .+.+...+..
T Consensus 164 fg~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~i~~~ 234 (326)
T 1blx_A 164 FGLARIYSFQ-------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD--VDQLGKILDV 234 (326)
T ss_dssp CCSCCCCCGG-------GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHH
T ss_pred CcccccccCC-------CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHHH
Confidence 9999865321 122345789999999999999999999999999877776544433322211 0000000000
Q ss_pred h------------------hcc-cchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 866 L------------------MTS-NESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 866 ~------------------~~~-~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
. ... ...........+...+++++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 235 IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp HCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 000 000000000112223344777999999999999999984
No 283
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.96 E-value=5.2e-31 Score=286.93 Aligned_cols=173 Identities=29% Similarity=0.404 Sum_probs=141.3
Q ss_pred CCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcceE
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEFL 722 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~~ 722 (929)
++|+..+.||+|+||.||+|+... ..+.+.+|++++++++||||+++++++... ...
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 77 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-----NKL 77 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET-----TEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecC-----Cce
Confidence 578899999999999999987641 125688999999999999999999998643 348
Q ss_pred EEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 723 ALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 723 ~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
++||||++ |+|.+++.... .++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 78 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 153 (299)
T 2r3i_A 78 YLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 153 (299)
T ss_dssp EEEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHH
T ss_pred EEEEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhc
Confidence 99999997 69998886432 2367899999999998 9999999999999999999999999999865
Q ss_pred ccccCCCCCccccceeccccccccccccCCCC-CCCCCCCCCCcCCCCCcchhHHhh
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGLGER-PSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
.... .......||+.|+|||++.+.. ++.++||||+|++++++.....++
T Consensus 154 ~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf 204 (299)
T 2r3i_A 154 GVPV------RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALF 204 (299)
T ss_dssp CCCS------BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred cCCc------cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCC
Confidence 3211 1122346899999999998765 799999999998877765554433
No 284
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2.5e-29 Score=274.66 Aligned_cols=210 Identities=19% Similarity=0.217 Sum_probs=104.8
Q ss_pred cCCCCCCCEEEccCCcccc--ccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccC-ccccCC
Q 002376 324 LTNSTHLNYLALDGNQFEG--KIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIP-IEIGQL 400 (929)
Q Consensus 324 ~~~l~~L~~L~Ls~N~l~~--~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l 400 (929)
|.++++|++|+|++|+++. ..|..+..+. +|++|+|++|.+.. +|..+..+++|++|++++|++++..+ ..+..+
T Consensus 48 ~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~-~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l 125 (306)
T 2z66_A 48 FDKLTQLTKLSLSSNGLSFKGCCSQSDFGTT-SLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL 125 (306)
T ss_dssp TTTCTTCSEEECCSSCCCEEEEEEHHHHSCS-CCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTC
T ss_pred hhccccCCEEECCCCccCcccCccccccccc-ccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhc
Confidence 3444555555555555441 1233333333 45555555555542 33334455555555555555543332 344555
Q ss_pred CCCCEEEecCCcCCCCCcccccCCCCCceecccCccccc-ccCcccccccccceecccCCcCCCCCCCCcccCCchhhhc
Q 002376 401 QGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTG-EIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISR 479 (929)
Q Consensus 401 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~ 479 (929)
++|++|++++|.+.+..+..+.++++|++|++++|.+++ ..|..|..+++|++|++++|++++.. |..+..
T Consensus 126 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~--------~~~~~~ 197 (306)
T 2z66_A 126 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLS--------PTAFNS 197 (306)
T ss_dssp TTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEEC--------TTTTTT
T ss_pred cCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcC--------HHHhcC
Confidence 555555555555555555555555555555555555544 34555555555555555555554322 333444
Q ss_pred ccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCC-CCCEEECCCCcCCC
Q 002376 480 LENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELK-GLEVLDLSSNKLSG 543 (929)
Q Consensus 480 l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~ 543 (929)
+++|+.|+|++|++++..+..+..+++|++|+|++|++++.+|..+..++ +|++|+|++|.+++
T Consensus 198 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 198 LSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred CCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 44555555555555544444455555555555555555555555555552 55555555555544
No 285
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.4e-28 Score=282.94 Aligned_cols=250 Identities=24% Similarity=0.275 Sum_probs=221.6
Q ss_pred CCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEe
Q 002376 329 HLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGL 408 (929)
Q Consensus 329 ~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 408 (929)
....++.+++.++ .+|..+. .+++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 119 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS---TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 119 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC---TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEEC
T ss_pred CCCEEEeCCCCcC-cCCCCCC---CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEEC
Confidence 3567888888887 6787654 47999999999999998999999999999999999999888889999999999999
Q ss_pred cCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEe
Q 002376 409 AGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDL 488 (929)
Q Consensus 409 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdL 488 (929)
++|+|++..+..|..+++|++|+|++|+++...+..|.++++|+.|+|++|+..+.++ +..+..+++|++|+|
T Consensus 120 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~-------~~~~~~l~~L~~L~L 192 (440)
T 3zyj_A 120 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYIS-------EGAFEGLSNLRYLNL 192 (440)
T ss_dssp CSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEEC-------TTTTTTCSSCCEEEC
T ss_pred CCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeC-------cchhhcccccCeecC
Confidence 9999998888889999999999999999998888889999999999999966544554 345778889999999
Q ss_pred cCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCccc
Q 002376 489 SDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGV 568 (929)
Q Consensus 489 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 568 (929)
++|+++ .+| .+..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++.
T Consensus 193 ~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 270 (440)
T 3zyj_A 193 AMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLL 270 (440)
T ss_dssp TTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCC
T ss_pred CCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCcc
Confidence 999998 455 488999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCC-CCCCCCCcccccCCCCCcC
Q 002376 569 VPSE-GIFRNMSNVHLKGNPKLCL 591 (929)
Q Consensus 569 ~p~~-~~~~~l~~l~l~~N~~~c~ 591 (929)
.+.. ..+++++.+++++||+.|.
T Consensus 271 ~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 271 PHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp CTTTTSSCTTCCEEECCSSCEECS
T ss_pred ChhHhccccCCCEEEcCCCCccCC
Confidence 7654 4578899999999999994
No 286
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.5e-28 Score=283.82 Aligned_cols=250 Identities=24% Similarity=0.260 Sum_probs=215.5
Q ss_pred CCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEe
Q 002376 329 HLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGL 408 (929)
Q Consensus 329 ~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 408 (929)
....++.+++.++ .+|..+. .+++.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 130 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP---SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLEL 130 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCcEEEECCCCcC-ccCCCCC---CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEEC
Confidence 3457788888887 6776554 47999999999999988999999999999999999999888889999999999999
Q ss_pred cCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEe
Q 002376 409 AGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDL 488 (929)
Q Consensus 409 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdL 488 (929)
++|+|++..+..|.++++|++|+|++|+++...+..|.++++|+.|++++|+..+.++ +..+..+++|++|+|
T Consensus 131 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~-------~~~~~~l~~L~~L~L 203 (452)
T 3zyi_A 131 FDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYIS-------EGAFEGLFNLKYLNL 203 (452)
T ss_dssp CSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEEC-------TTTTTTCTTCCEEEC
T ss_pred CCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccC-------hhhccCCCCCCEEEC
Confidence 9999998888889999999999999999998777789999999999999855444554 335677889999999
Q ss_pred cCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCccc
Q 002376 489 SDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGV 568 (929)
Q Consensus 489 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 568 (929)
++|++++. | .+..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++.
T Consensus 204 ~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 281 (452)
T 3zyi_A 204 GMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 281 (452)
T ss_dssp TTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCcc
Confidence 99999854 4 488899999999999999999999999999999999999999998899999999999999999999977
Q ss_pred CCCC-CCCCCCCcccccCCCCCcC
Q 002376 569 VPSE-GIFRNMSNVHLKGNPKLCL 591 (929)
Q Consensus 569 ~p~~-~~~~~l~~l~l~~N~~~c~ 591 (929)
.+.. ..+++++.+++++||+.|.
T Consensus 282 ~~~~~~~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 282 PHDLFTPLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp CTTSSTTCTTCCEEECCSSCEECS
T ss_pred ChHHhccccCCCEEEccCCCcCCC
Confidence 6654 4478889999999999884
No 287
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.96 E-value=1.7e-31 Score=289.37 Aligned_cols=227 Identities=18% Similarity=0.227 Sum_probs=151.6
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.++|+..+.||+|+||.||+|+... ..+.+.++...++.++||||+++++++...+ .
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~-----~ 80 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG-----D 80 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----S
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC-----C
Confidence 4678899999999999999988641 1123344555688889999999999996533 3
Q ss_pred EEEEEEecCCCCccccccc------------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccc
Q 002376 722 LALVYEFLSNGSLGDWIHG------------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLA 789 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~------------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla 789 (929)
.++||||++ |+|.++++. ...++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||++
T Consensus 81 ~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 157 (290)
T 3fme_A 81 VWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGIS 157 (290)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC---
T ss_pred EEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCc
Confidence 899999997 588777642 1134679999999999842 7999999999999999999999999999
Q ss_pred cccccccCCCCCccccceecccccccccccc----CCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHH
Q 002376 790 RFLLERVDNQSSISSTHVFMGSIGYVPPEYG----LGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQ 865 (929)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 865 (929)
+..... .......||+.|+|||++ .+..++.++||||+|++++++.+...++......... +......
T Consensus 158 ~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~ 229 (290)
T 3fme_A 158 GYLVDD-------VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ-LKQVVEE 229 (290)
T ss_dssp -------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHH-HHHHHHS
T ss_pred cccccc-------ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHH-HHHHhcc
Confidence 865322 112234699999999996 5667899999999998777765554444322211111 1111111
Q ss_pred hhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 866 LMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
...... ... .+..+.+++.+|++.||++|||++|+++
T Consensus 230 ~~~~~~--~~~----~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 230 PSPQLP--ADK----FSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CCCCCC--TTT----SCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCcc--ccc----CCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 000000 001 1122233777999999999999999986
No 288
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=6e-32 Score=323.83 Aligned_cols=419 Identities=15% Similarity=0.098 Sum_probs=216.3
Q ss_pred CCcCCCCCCCCcEEeCCCCCC---CCCcccccc------------cccccceecccccccCCCCChhhhcc-C-CCCcEE
Q 002376 111 LPREIGNLFRLRVLNISFNNL---QGELPVNIS------------KLTELKMLDLMANKITGRVTDDQLRN-L-RSLQVL 173 (929)
Q Consensus 111 ~p~~~~~l~~L~~L~Ls~N~l---~~~~p~~~~------------~l~~L~~L~Ls~N~l~~~i~~~~~~~-l-~~L~~L 173 (929)
.+..+..+++|++|+|+++.. .+.+|..++ .+++|++|+|++|.+++..+. .+.. + .+|++|
T Consensus 65 ~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~-~l~~~~~~~L~~L 143 (592)
T 3ogk_B 65 PDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLD-RLAKARADDLETL 143 (592)
T ss_dssp HHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHH-HHHHHHGGGCCEE
T ss_pred hHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHH-HHHHhccccCcEE
Confidence 344456778899999877532 133443333 566677777777666532222 2333 2 236666
Q ss_pred EccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCc----cCCccccCCCCceEEeeecCCCCcCCcccccCCC
Q 002376 174 NFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGT----VPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLP 249 (929)
Q Consensus 174 ~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~ 249 (929)
+|++|.- ..+.. ++....++++|++|+|++|.+++. ++..+.++++|++|+|++|.+++.-+
T Consensus 144 ~L~~~~~--~~~~~----l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~-------- 209 (592)
T 3ogk_B 144 KLDKCSG--FTTDG----LLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISP-------- 209 (592)
T ss_dssp EEESCEE--EEHHH----HHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCH--------
T ss_pred ECcCCCC--cCHHH----HHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCH--------
Confidence 6666541 00000 111123456666666666665544 22233455666666666666542111
Q ss_pred CcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCC
Q 002376 250 NLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTH 329 (929)
Q Consensus 250 ~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~ 329 (929)
+.++..+.++++|+.|++++|.+.+ +|..+.++++|+.|+++.+...... ......+..+++
T Consensus 210 -------------~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~----~~~~~~l~~~~~ 271 (592)
T 3ogk_B 210 -------------KDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGM----PEKYMNLVFPRK 271 (592)
T ss_dssp -------------HHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTC----TTSSSCCCCCTT
T ss_pred -------------HHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccch----HHHHHHhhcccc
Confidence 1122223344445555555544443 3344444455555554431111000 011133445566
Q ss_pred CCEEEccCCccccccCchhhhccccccEEEecCCccccccC-CCCCCCCcccEEEeeCCCCC-cccCccccCCCCCCEEE
Q 002376 330 LNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIP-ASIGRLRSLTLLDLSYNSIS-GEIPIEIGQLQGLQVLG 407 (929)
Q Consensus 330 L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~ 407 (929)
|+.|+++++.. +.+|..+..++ +|++|+|++|.+++... ..+..+++|++|+|+ |.+. +.++..+..+++|++|+
T Consensus 272 L~~L~l~~~~~-~~l~~~~~~~~-~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~ 348 (592)
T 3ogk_B 272 LCRLGLSYMGP-NEMPILFPFAA-QIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLR 348 (592)
T ss_dssp CCEEEETTCCT-TTGGGGGGGGG-GCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEE
T ss_pred ccccCccccch-hHHHHHHhhcC-CCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEE
Confidence 66666665432 24555554444 56666666666554332 234566667777776 3332 22333335566677777
Q ss_pred ec-----------CCcCCCC-CcccccCCCCCceecccCcccccccCccccc-ccccceeccc----CCcCCCCCCCCcc
Q 002376 408 LA-----------GNEIPGG-IPNSLANLKKLNQIDLSGNELTGEIPISFGN-FQSLLSIDLS----NNRINGNIPKGIL 470 (929)
Q Consensus 408 L~-----------~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~g~i~~~~~ 470 (929)
++ .|.+++. ++..+..+++|++|+++.|++++..+..+.. +++|+.|+++ .|.+++. |..
T Consensus 349 L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~-p~~-- 425 (592)
T 3ogk_B 349 IERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDL-PLD-- 425 (592)
T ss_dssp EECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSC-CCH--
T ss_pred eecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCc-hHH--
Confidence 76 2455432 2222344666777777666666655555544 6667777774 5555532 000
Q ss_pred cCCchhhhcccCccEEEecCC--CCCCCCCcchhc-CcCcceeecccccccc-cCCccccCCCCCCEEECCCCcCCCc-C
Q 002376 471 RPLPEEISRLENVVTIDLSDN--SLSGNLPNSLKN-CKSLEELLMAYNQFSG-PIPNIVAELKGLEVLDLSSNKLSGS-I 545 (929)
Q Consensus 471 ~~~p~~~~~l~~L~~LdLs~N--~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~ 545 (929)
..++..+..+++|+.|+|+++ .+++..+..++. +++|++|+|++|++++ .++..+..+++|++|+|++|.+++. +
T Consensus 426 ~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 505 (592)
T 3ogk_B 426 NGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAI 505 (592)
T ss_dssp HHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHH
T ss_pred HHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHH
Confidence 001333555667777777643 255444444433 6667777777777665 3444556667777777777776543 2
Q ss_pred CcccccCCCCCeEeCCCCcCccc
Q 002376 546 PSDLQNLQALRSLNLTFNNLEGV 568 (929)
Q Consensus 546 p~~~~~l~~L~~L~Ls~N~l~~~ 568 (929)
+..+..+++|++|+|++|+++..
T Consensus 506 ~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 506 AAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHHHhcCccCeeECcCCcCCHH
Confidence 33345567777777777776543
No 289
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=5.2e-30 Score=280.69 Aligned_cols=226 Identities=25% Similarity=0.299 Sum_probs=187.6
Q ss_pred CCEEEccCCcc-ccccCchhh-------hccccccEEEecCCccccccCCCC--CCCCcccEEEeeCCCCCcccCccccC
Q 002376 330 LNYLALDGNQF-EGKIPESIG-------NFSNELSKLYLGGNHIYGKIPASI--GRLRSLTLLDLSYNSISGEIPIEIGQ 399 (929)
Q Consensus 330 L~~L~Ls~N~l-~~~~p~~~~-------~~~~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~~~~ 399 (929)
|+.|+|++|++ .+.+|..+. .+. +|++|+|++|++++.+|..+ +.+++|++|+|++|++++. |..++.
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~ 142 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGIS-GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAE 142 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTS-CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcC-CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHH
Confidence 66666777776 345666554 455 79999999999998888876 8999999999999999987 888888
Q ss_pred C-----CCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccc--cCccc--ccccccceecccCCcCCCCCCCCcc
Q 002376 400 L-----QGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGE--IPISF--GNFQSLLSIDLSNNRINGNIPKGIL 470 (929)
Q Consensus 400 l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~--~~l~~L~~L~Ls~N~l~g~i~~~~~ 470 (929)
+ ++|++|+|++|++++..|..|.++++|++|+|++|++.+. .|..+ .++++|++|+|++|+|++. +
T Consensus 143 l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~---- 217 (312)
T 1wwl_A 143 LQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETP-S---- 217 (312)
T ss_dssp HHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCH-H----
T ss_pred HHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcch-H----
Confidence 7 8999999999999998889999999999999999998765 23333 8899999999999999731 0
Q ss_pred cCCc-hhhhcccCccEEEecCCCCCCCCC-cchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcc
Q 002376 471 RPLP-EEISRLENVVTIDLSDNSLSGNLP-NSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSD 548 (929)
Q Consensus 471 ~~~p-~~~~~l~~L~~LdLs~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 548 (929)
.++ ..+..+++|++|||++|++++.+| ..+..+++|++|+|++|+|+ .+|..+. ++|++|||++|+|++. |.
T Consensus 218 -~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~- 291 (312)
T 1wwl_A 218 -GVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS- 291 (312)
T ss_dssp -HHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-
T ss_pred -HHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-
Confidence 112 234577899999999999998775 56677899999999999999 6777666 8999999999999976 66
Q ss_pred cccCCCCCeEeCCCCcCccc
Q 002376 549 LQNLQALRSLNLTFNNLEGV 568 (929)
Q Consensus 549 ~~~l~~L~~L~Ls~N~l~~~ 568 (929)
+..+++|++|++++|++++.
T Consensus 292 ~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 292 PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp TTTSCEEEEEECTTCTTTCC
T ss_pred HhhCCCCCEEeccCCCCCCC
Confidence 89999999999999999863
No 290
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.96 E-value=4e-31 Score=293.57 Aligned_cols=228 Identities=19% Similarity=0.272 Sum_probs=162.0
Q ss_pred hhCCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHH-HHccCCccccceeeecccCCCCCcc
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECET-LRNVRHRNLVKLITSCSSLDSKNME 720 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~-l~~l~Hpniv~l~~~~~~~~~~~~~ 720 (929)
..++|+..+.||+|+||.||+|+... ..+++..|..+ ++.++||||+++++++...+
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~----- 123 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG----- 123 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSS-----
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCC-----
Confidence 45688889999999999999987631 13455566665 77889999999999986533
Q ss_pred eEEEEEEecCCCCcccccccc------------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGE------------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~------------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGl 788 (929)
..++||||+++ +|.+++... ..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||+
T Consensus 124 ~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 200 (340)
T 3an0_A 124 DVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGI 200 (340)
T ss_dssp CEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSH
T ss_pred cEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCC
Confidence 48999999975 898877521 134679999999999742 899999999999999999999999999
Q ss_pred ccccccccCCCCCccccceeccccccccccccCC----CCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHH
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG----ERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELR 864 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 864 (929)
++..... .......||+.|+|||++.+ ..++.++||||+|++++++.+...++........ .+.
T Consensus 201 ~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~-----~~~ 268 (340)
T 3an0_A 201 SGYLVDS-------VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ-----QLK 268 (340)
T ss_dssp HHHHSCH-------HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH-----HHH
T ss_pred ceecccc-------cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHH-----HHH
Confidence 9865321 11223479999999999653 4689999999999887776555444332221111 111
Q ss_pred HhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 865 QLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
........ .... ..+...+.+++.+||+.||++||++.|+++
T Consensus 269 ~~~~~~~~-~~~~-~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 269 QVVEEPSP-QLPA-DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp HHHHSCCC-CCCG-GGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHhcCCCC-CCCc-ccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 11110000 0000 111222333777999999999999999976
No 291
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.96 E-value=4.2e-30 Score=286.30 Aligned_cols=227 Identities=17% Similarity=0.255 Sum_probs=166.6
Q ss_pred hCCCCCceeecccCceeEEeccccCc-------------------------------HHHHHHHHHHHHccCCcccccee
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTGS-------------------------------WKSFIAECETLRNVRHRNLVKLI 708 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~~-------------------------------~~~~~~E~~~l~~l~Hpniv~l~ 708 (929)
.++|...+.||+|+||.||+|+..+. .+.|.+|++++++++||||++++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred cCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 46899999999999999999876410 07899999999999999999999
Q ss_pred eecccCCCCCcceEEEEEEecCCCCcccc------cccc--c--------cccccHHHHHHHhhh-CCCCCEEecCCCCC
Q 002376 709 TSCSSLDSKNMEFLALVYEFLSNGSLGDW------IHGE--R--------KNELDITSALDYLHN-DCEVPVVHSDLKPG 771 (929)
Q Consensus 709 ~~~~~~~~~~~~~~~lV~e~~~~gsL~~~------l~~~--~--------~~~~~ia~aL~yLH~-~~~~~iiHrDlk~~ 771 (929)
+++... ...++||||+++|+|.++ +... . .++.|++.||+|||+ . +|+||||||+
T Consensus 110 ~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~ 181 (348)
T 2pml_X 110 GIITNY-----DEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPS 181 (348)
T ss_dssp EEEESS-----SEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGG
T ss_pred EEEeeC-----CeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChH
Confidence 998653 358999999999999998 5431 1 236789999999998 7 9999999999
Q ss_pred CeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCC-CCCC-CCCCCCCcCCCCCcchhHHhhh
Q 002376 772 NILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGE-RPST-AGDVPTSESFAGEFNIVKWVES 849 (929)
Q Consensus 772 NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DV~s~g~~~~~~~~~~~~~~ 849 (929)
||+++.++.+||+|||.++..... ......||+.|+|||++.+. .++. ++||||+|++++++.....++.
T Consensus 182 Nil~~~~~~~kl~dfg~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 253 (348)
T 2pml_X 182 NILMDKNGRVKLSDFGESEYMVDK--------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS 253 (348)
T ss_dssp GEEECTTSCEEECCCTTCEECBTT--------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred hEEEcCCCcEEEeccccccccccc--------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999865321 22345789999999999887 5666 9999999987777655443332
Q ss_pred cCCchhhhccChHHHHhhccc-chhh---------------hhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 850 NLPENVLQVLDPELRQLMTSN-ESQT---------------IQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 850 ~~~~~~~~~~~~~l~~~~~~~-~~~~---------------~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..... ..+....... .... ......+...+.+++.+||+.||++|||++|+++
T Consensus 254 ~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 254 LKISL------VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp CSSCS------HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCcH------HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 22110 1111100000 0000 0000111222334777999999999999999986
No 292
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.96 E-value=6.8e-31 Score=290.92 Aligned_cols=234 Identities=17% Similarity=0.152 Sum_probs=143.5
Q ss_pred hCCCCCc-eeecccCceeEEeccccCc-----------HHHHHHHH-HHHHccCCccccceeeecccCCCCCcceEEEEE
Q 002376 660 TGNFSHE-NLIGSGSFGSVLHNERTGS-----------WKSFIAEC-ETLRNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 660 ~~~~~~~-~~iG~G~~g~Vy~~~~~~~-----------~~~~~~E~-~~l~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
.++|... ++||+|+||.||+|++... .....+|+ ..++.++||||+++++++.... .+....++||
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~~~lv~ 105 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMH-HGKRCLLIIM 105 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEEEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHHHHHHHHHhcCCCChHHHHHHHhhcc-CCCceEEEEE
Confidence 4678874 4699999999999976521 12333444 3466779999999999986532 2345589999
Q ss_pred EecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC---CCceEEeccccccccc
Q 002376 727 EFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE---EMTAKVGDFGLARFLL 793 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~---~~~~ki~DfGla~~~~ 793 (929)
||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++...
T Consensus 106 e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~ 182 (336)
T 3fhr_A 106 ECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182 (336)
T ss_dssp ECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-
T ss_pred eccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceecc
Confidence 9999999999986432 2367899999999998 9999999999999976 4569999999998653
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhcccch
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ 872 (929)
.. ......||+.|+|||++.+..++.++||||+|++++++.....++..... .........+... ...
T Consensus 183 ~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---~~~ 251 (336)
T 3fhr_A 183 QN--------ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG---QYG 251 (336)
T ss_dssp -----------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------C
T ss_pred cc--------ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhcc---ccc
Confidence 21 12335789999999999888899999999999877765544433322211 1100001111100 000
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
........+...+.+++.+|++.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 252 FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp CCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000000111222334777999999999999999986
No 293
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=4.5e-29 Score=269.69 Aligned_cols=251 Identities=22% Similarity=0.239 Sum_probs=178.5
Q ss_pred CEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecC
Q 002376 331 NYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAG 410 (929)
Q Consensus 331 ~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 410 (929)
..++.+++.++ .+|..+ +.+|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..+++|++|++++
T Consensus 14 ~~~~c~~~~l~-~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCS-SCCTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcc-cCCcCC---CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 46667777776 455543 23677777777777777667777777777788877777776677777777778888877
Q ss_pred Cc-CCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEec
Q 002376 411 NE-IPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLS 489 (929)
Q Consensus 411 N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs 489 (929)
|. ++...|..|..+++|++|++++|++++..|..|.++++|++|++++|++++.. +..+..+++|++|+|+
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--------~~~~~~l~~L~~L~l~ 161 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALP--------DDTFRDLGNLTHLFLH 161 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC--------TTTTTTCTTCCEEECC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccC--------HhHhccCCCccEEECC
Confidence 76 66666777777777888888888777766777777777888888887776422 3346667778888888
Q ss_pred CCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccC
Q 002376 490 DNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVV 569 (929)
Q Consensus 490 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 569 (929)
+|++++..+..|..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|++++|++++..
T Consensus 162 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 241 (285)
T 1ozn_A 162 GNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDC 241 (285)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred CCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCC
Confidence 88777666666777888888888888888777777888888888888888887766666777888888888888877654
Q ss_pred CCCCCCCCCCcccccCCCCCcCCC
Q 002376 570 PSEGIFRNMSNVHLKGNPKLCLQL 593 (929)
Q Consensus 570 p~~~~~~~l~~l~l~~N~~~c~~~ 593 (929)
+.......++.+....|...|..|
T Consensus 242 ~~~~~~~~l~~~~~~~~~~~c~~p 265 (285)
T 1ozn_A 242 RARPLWAWLQKFRGSSSEVPCSLP 265 (285)
T ss_dssp GGHHHHHHHHHCCSEECCCBEEES
T ss_pred CcHHHHHHHHhcccccCccccCCc
Confidence 432222233344445555555433
No 294
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.96 E-value=5.1e-30 Score=293.89 Aligned_cols=231 Identities=21% Similarity=0.228 Sum_probs=154.7
Q ss_pred CCCCceeecccCceeEEec-ccc-----------CcHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcceEEEEEEe
Q 002376 662 NFSHENLIGSGSFGSVLHN-ERT-----------GSWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVYEF 728 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~-~~~-----------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~~~lV~e~ 728 (929)
.|...+.||+|+||+||.+ ... ...+.+.+|+++++++ +|||||++++++.+ ....|+||||
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~-----~~~~~lv~E~ 90 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETT-----DRFLYIALEL 90 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEEC-----SSEEEEEECC
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEec-----CCeEEEEEec
Confidence 3445688999999999643 222 1245678999999986 89999999999853 3458999999
Q ss_pred cCCCCccccccccc---------------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC-------------Cc
Q 002376 729 LSNGSLGDWIHGER---------------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE-------------MT 780 (929)
Q Consensus 729 ~~~gsL~~~l~~~~---------------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~-------------~~ 780 (929)
|+ |+|.+++.... .++.||+.||+|||+. +|+||||||+|||++.+ +.
T Consensus 91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~ 166 (434)
T 2rio_A 91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLR 166 (434)
T ss_dssp CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceE
Confidence 95 69999886321 2467999999999998 99999999999999754 48
Q ss_pred eEEeccccccccccccCCCCCccccceeccccccccccccCC-------CCCCCCCCCCCCcCCCCCcch-hHHhhhcCC
Q 002376 781 AKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG-------ERPSTAGDVPTSESFAGEFNI-VKWVESNLP 852 (929)
Q Consensus 781 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~ 852 (929)
+||+|||+++.+...... ........+||++|||||++.+ ..++.++||||+|++++++.. ...++....
T Consensus 167 ~kL~DFG~a~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 244 (434)
T 2rio_A 167 ILISDFGLCKKLDSGQSS--FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244 (434)
T ss_dssp EEECCCTTCEECCC----------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred EEEcccccceecCCCCcc--ceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence 999999999876432111 0111234579999999999976 678999999999987777544 333322111
Q ss_pred chhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 853 ENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 853 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.... ..+............. ...+...+.+++.+||+.||++|||+.||++
T Consensus 245 ~~~~----~i~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 245 SRES----NIIRGIFSLDEMKCLH-DRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp THHH----HHHHTCCCCCCCTTCC-CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhHH----HHhcCCCCcccccccc-cccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1100 0011110000000000 1122333344888999999999999999975
No 295
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.96 E-value=9.4e-31 Score=299.10 Aligned_cols=230 Identities=20% Similarity=0.255 Sum_probs=155.5
Q ss_pred hCCCCCceeecccCceeE-EeccccC-----------cHHHHHHHHHHHHcc-CCccccceeeecccCCCCCcceEEEEE
Q 002376 660 TGNFSHENLIGSGSFGSV-LHNERTG-----------SWKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~V-y~~~~~~-----------~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
..+|+..++||+|+||+| |++...+ ..+.+.+|+++++++ +|||||++++++.+ ....|+||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~-----~~~~~lv~ 97 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKD-----RQFQYIAI 97 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEE-----TTEEEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEec-----CCEEEEEE
Confidence 346888899999999985 4443331 123467899999999 79999999999854 34589999
Q ss_pred EecCCCCccccccccc---------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC-----CCceEEecccccccc
Q 002376 727 EFLSNGSLGDWIHGER---------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE-----EMTAKVGDFGLARFL 792 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~---------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~-----~~~~ki~DfGla~~~ 792 (929)
|||+ |+|.+++.... .++.||+.||+|||+. +|+||||||+|||++. ...+||+|||+|+..
T Consensus 98 E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~ 173 (432)
T 3p23_A 98 ELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173 (432)
T ss_dssp ECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred ECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence 9996 69999886432 3467899999999998 9999999999999943 346889999999876
Q ss_pred ccccCCCCCccccceeccccccccccccC---CCCCCCCCCCCCCcCCCCCcch-hHHhhhcCCchhhhccChHHHHhhc
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGL---GERPSTAGDVPTSESFAGEFNI-VKWVESNLPENVLQVLDPELRQLMT 868 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~ 868 (929)
..... ........+||++|||||++. ...++.++||||+|++++++.. ...++..... ........
T Consensus 174 ~~~~~---~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~-------~~~~~~~~ 243 (432)
T 3p23_A 174 AVGRH---SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ-------RQANILLG 243 (432)
T ss_dssp ---------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT-------HHHHHHTT
T ss_pred cCCCc---ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH-------HHHHHHhc
Confidence 43211 111234467999999999998 4567889999999987777544 3333321111 11111000
Q ss_pred ccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 869 SNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
................+++++.+||+.||++|||++||++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 244 ACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp CCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0000000011112233444888999999999999999983
No 296
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.96 E-value=1.2e-30 Score=291.38 Aligned_cols=236 Identities=22% Similarity=0.247 Sum_probs=164.1
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCC-Ccc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSK-NME 720 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~-~~~ 720 (929)
.++|...+.||+|+||.||+|.+.. ..+.+.+|+.++++++||||+++++++...+.. ...
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 3578889999999999999997541 135688999999999999999999998654321 112
Q ss_pred eEEEEEEecCCCCcccccccc------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccccc
Q 002376 721 FLALVYEFLSNGSLGDWIHGE------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLE 794 (929)
Q Consensus 721 ~~~lV~e~~~~gsL~~~l~~~------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 794 (929)
..++||||++ |+|.+++... ..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 178 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADA 178 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC---
T ss_pred eEEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCCC
Confidence 3599999997 6898887532 23467999999999998 999999999999999999999999999986421
Q ss_pred ccCCCCCccccceeccccccccccccCC-CCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhh--------------
Q 002376 795 RVDNQSSISSTHVFMGSIGYVPPEYGLG-ERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQ-------------- 857 (929)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~-------------- 857 (929)
......||+.|+|||++.+ ..++.++||||+|++++++.....++..... ....
T Consensus 179 ---------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 179 ---------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp --------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHT
T ss_pred ---------CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 1233578999999999887 6789999999999887776554443322111 0000
Q ss_pred -ccChHHHHhhc---ccchhh-hhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 858 -VLDPELRQLMT---SNESQT-IQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 858 -~~~~~l~~~~~---~~~~~~-~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
+.+........ ...... ..........+.+++.+|++.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00111110000 000000 0000111223334777999999999999999975
No 297
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=3.5e-28 Score=280.71 Aligned_cols=231 Identities=23% Similarity=0.230 Sum_probs=203.2
Q ss_pred CCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEE
Q 002376 328 THLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLG 407 (929)
Q Consensus 328 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 407 (929)
+++++|+|++|++++..|..+..+. +|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|..+++|++|+
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~-~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 153 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLH-HLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELW 153 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCT-TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEE
T ss_pred CCccEEECcCCcCceECHHHcCCCC-CCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEE
Confidence 5678888888888877778888776 799999999999888888999999999999999999877777788899999999
Q ss_pred ecCCcCCCCCcccccCCCCCceecccC-cccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEE
Q 002376 408 LAGNEIPGGIPNSLANLKKLNQIDLSG-NELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTI 486 (929)
Q Consensus 408 L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~L 486 (929)
|++|+|++..+..|.++++|++|+|++ |.+....+..|.++++|+.|+|++|++++ + | .+..+++|+.|
T Consensus 154 L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~--------~-~~~~l~~L~~L 223 (452)
T 3zyi_A 154 LRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-M--------P-NLTPLVGLEEL 223 (452)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-C--------C-CCTTCTTCCEE
T ss_pred CCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-c--------c-cccccccccEE
Confidence 999999877777899999999999998 55665555678999999999999999874 2 2 36678899999
Q ss_pred EecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCc
Q 002376 487 DLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLE 566 (929)
Q Consensus 487 dLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 566 (929)
||++|++++..|..|.++++|+.|+|++|++++..|..|..+++|+.|||++|+|++..+..+..+++|+.|+|++|++.
T Consensus 224 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 224 EMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp ECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred ECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999888888999999999999999998
Q ss_pred ccC
Q 002376 567 GVV 569 (929)
Q Consensus 567 ~~~ 569 (929)
+..
T Consensus 304 CdC 306 (452)
T 3zyi_A 304 CDC 306 (452)
T ss_dssp CST
T ss_pred CCC
Confidence 753
No 298
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.96 E-value=1.5e-30 Score=288.56 Aligned_cols=170 Identities=25% Similarity=0.359 Sum_probs=138.9
Q ss_pred hCCCCCceeecccCceeEEecccc---C-------------cHHHHHHHHHHHHccCCcc------ccceeeecccCCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT---G-------------SWKSFIAECETLRNVRHRN------LVKLITSCSSLDSK 717 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~---~-------------~~~~~~~E~~~l~~l~Hpn------iv~l~~~~~~~~~~ 717 (929)
.++|+..+.||+|+||.||+|.+. + ..+.+.+|+++++.++|++ ++++++++..
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~---- 88 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH---- 88 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE----
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc----
Confidence 358899999999999999998652 1 1356889999999987765 9999999854
Q ss_pred CcceEEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC----------
Q 002376 718 NMEFLALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE---------- 777 (929)
Q Consensus 718 ~~~~~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~---------- 777 (929)
....++||||+ +++|.+++.... .++.|++.||+|||+. +|+||||||+||+++.
T Consensus 89 -~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 89 -HGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp -TTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC--
T ss_pred -CCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCc
Confidence 33589999999 889999886432 2367899999999998 9999999999999987
Q ss_pred ---------CCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHh
Q 002376 778 ---------EMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWV 847 (929)
Q Consensus 778 ---------~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~ 847 (929)
++.+||+|||+++.... ......||+.|+|||++.+..++.++||||+|++++++.....+
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 233 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDE---------HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTV 233 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTS---------CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred cccccccccCCCceEeeCcccccCcc---------ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCC
Confidence 67899999999986421 12234789999999999999999999999999887776554433
No 299
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.96 E-value=7.5e-31 Score=295.25 Aligned_cols=176 Identities=22% Similarity=0.318 Sum_probs=141.6
Q ss_pred hCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHccC-----------Cccccceeeeccc
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNVR-----------HRNLVKLITSCSS 713 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l~-----------Hpniv~l~~~~~~ 713 (929)
.++|...+.||+|+||.||+|++.. ..+.+.+|+.++++++ ||||+++++++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 3579999999999999999998541 2456889999999886 8999999999865
Q ss_pred CCCCCcceEEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeec------C
Q 002376 714 LDSKNMEFLALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLD------E 777 (929)
Q Consensus 714 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~------~ 777 (929)
.+ ......++||||+ +++|.+++.... .++.||+.||+|||+.+ +|+||||||+|||++ .
T Consensus 98 ~~-~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 98 KG-PNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EE-TTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTT
T ss_pred cC-CCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcC
Confidence 43 2234689999999 899999886422 23678999999999853 799999999999994 4
Q ss_pred CCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 778 EMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 778 ~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
.+.+||+|||+++..... .....||+.|+|||++.+..++.++||||+|++++++.....++
T Consensus 174 ~~~~kl~Dfg~a~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 235 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEH---------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF 235 (373)
T ss_dssp EEEEEECCCTTCEETTBC---------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC
T ss_pred cceEEEcccccccccCCC---------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence 458999999999865321 22347899999999999999999999999998887766554443
No 300
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.96 E-value=4.5e-31 Score=297.90 Aligned_cols=179 Identities=28% Similarity=0.309 Sum_probs=141.6
Q ss_pred HHHHHhhCCCCCceeecccCceeEEeccccC---------------cHHHHHHHHHHHHccC-Cc-----cccceeeecc
Q 002376 654 DELRRATGNFSHENLIGSGSFGSVLHNERTG---------------SWKSFIAECETLRNVR-HR-----NLVKLITSCS 712 (929)
Q Consensus 654 ~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~~~~~E~~~l~~l~-Hp-----niv~l~~~~~ 712 (929)
++-....++|+..+.||+|+||+||+|+... ..+++.+|+++++.++ |+ +|+++++++.
T Consensus 47 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~ 126 (382)
T 2vx3_A 47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126 (382)
T ss_dssp CTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred ecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence 3344557899999999999999999997541 1356778888888885 44 4999999885
Q ss_pred cCCCCCcceEEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeec--CCCc
Q 002376 713 SLDSKNMEFLALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLD--EEMT 780 (929)
Q Consensus 713 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~--~~~~ 780 (929)
.. ...++||||++ |+|.+++.... .++.|++.||+|||++ ..+|+||||||+|||++ .++.
T Consensus 127 ~~-----~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~ 199 (382)
T 2vx3_A 127 FR-----NHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSA 199 (382)
T ss_dssp ET-----TEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCC
T ss_pred cC-----CceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCc
Confidence 43 35899999996 59999886432 3467899999999953 23899999999999994 5788
Q ss_pred eEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 781 AKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 781 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
+||+|||+|+..... .....||+.|+|||++.+..++.++||||+|++++++.....++
T Consensus 200 ~kL~DFG~a~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf 258 (382)
T 2vx3_A 200 IKIVDFGSSCQLGQR---------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF 258 (382)
T ss_dssp EEECCCTTCEETTCC---------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred EEEEeccCceecccc---------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999865321 22357899999999999999999999999998888776655444
No 301
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=5.9e-28 Score=277.80 Aligned_cols=230 Identities=24% Similarity=0.242 Sum_probs=190.6
Q ss_pred CCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEE
Q 002376 328 THLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLG 407 (929)
Q Consensus 328 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 407 (929)
+++++|+|++|++++..+..+..+. +|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~-~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 142 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLR-HLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELW 142 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCS-SCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEE
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCC-CCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceee
Confidence 4566777777777766666666665 688888888888777777788888888888888888866666788888888888
Q ss_pred ecCCcCCCCCcccccCCCCCceecccC-cccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEE
Q 002376 408 LAGNEIPGGIPNSLANLKKLNQIDLSG-NELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTI 486 (929)
Q Consensus 408 L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~L 486 (929)
|++|+|++..+..|.++++|++|+|++ |.++...+..|.++++|+.|+|++|+++ .+ | .+..+++|+.|
T Consensus 143 L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~--------~-~~~~l~~L~~L 212 (440)
T 3zyj_A 143 LRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EI--------P-NLTPLIKLDEL 212 (440)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SC--------C-CCTTCSSCCEE
T ss_pred CCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cc--------c-ccCCCcccCEE
Confidence 888888877777888888888888888 4455455557888889999999999887 33 3 36678899999
Q ss_pred EecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCc
Q 002376 487 DLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLE 566 (929)
Q Consensus 487 dLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 566 (929)
||++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|||++|+|++..+..|..+++|+.|+|++|++.
T Consensus 213 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 213 DLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 99999999888999999999999999999999999999999999999999999999888888899999999999999998
Q ss_pred cc
Q 002376 567 GV 568 (929)
Q Consensus 567 ~~ 568 (929)
+.
T Consensus 293 Cd 294 (440)
T 3zyj_A 293 CN 294 (440)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 302
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.95 E-value=1.1e-29 Score=274.75 Aligned_cols=227 Identities=23% Similarity=0.287 Sum_probs=164.1
Q ss_pred hCCCCCceeecccCceeEEecccc------------------CcHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERT------------------GSWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~------------------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.++|+..+.||+|+||.||+|+.. ...+.+.+|++++++++||||+++++++... ..
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 95 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS-----SS 95 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----SE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCC-----Ce
Confidence 457899999999999999998754 1356789999999999999999999998543 34
Q ss_pred EEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC---CceEEecccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE---MTAKVGDFGLAR 790 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~---~~~ki~DfGla~ 790 (929)
.++||||+++++|.+++.... .++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 96 FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 899999999999988875322 3467899999999998 99999999999999754 479999999998
Q ss_pred ccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhccc
Q 002376 791 FLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSN 870 (929)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 870 (929)
..... .......||+.|+|||++.+ .++.++||||+|++++++.....++..... .++.. .+.. ..
T Consensus 173 ~~~~~-------~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~-~~~~---~~ 238 (287)
T 2wei_A 173 CFQQN-------TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--YDILK-RVET---GK 238 (287)
T ss_dssp TBCCC-------SSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHH-HHHH---CC
T ss_pred eecCC-------CccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH--HHHHH-HHHc---CC
Confidence 65321 11223468999999999876 489999999999776665443333221111 11111 1111 00
Q ss_pred chhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 871 ESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 871 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..........++..+.+++.+|++.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 239 YAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00000011111222333777999999999999999986
No 303
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.95 E-value=7.9e-31 Score=287.60 Aligned_cols=237 Identities=22% Similarity=0.312 Sum_probs=162.5
Q ss_pred CChHHHHHhhCCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccC--Cccccceeeec
Q 002376 651 ISYDELRRATGNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVR--HRNLVKLITSC 711 (929)
Q Consensus 651 ~~~~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~--Hpniv~l~~~~ 711 (929)
+.++.+....++|+..+.||+|+||.||++.... ..+.+.+|++++++++ ||||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 3444444556789999999999999999986541 2357889999999997 59999999998
Q ss_pred ccCCCCCcceEEEEEEecCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEE
Q 002376 712 SSLDSKNMEFLALVYEFLSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKV 783 (929)
Q Consensus 712 ~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki 783 (929)
... ...++||| +.+|+|.+++.... .++.|++.||+|||+. +|+||||||+||++++ +.+||
T Consensus 98 ~~~-----~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL 167 (313)
T 3cek_A 98 ITD-----QYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKL 167 (313)
T ss_dssp ECS-----SEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEE
T ss_pred ecC-----CEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEE
Confidence 543 35899999 55889999986433 2367899999999998 9999999999999975 89999
Q ss_pred eccccccccccccCCCCCccccceeccccccccccccCC-----------CCCCCCCCCCCCcCCCCCcchhHHhhhcCC
Q 002376 784 GDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG-----------ERPSTAGDVPTSESFAGEFNIVKWVESNLP 852 (929)
Q Consensus 784 ~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~ 852 (929)
+|||+++....... ........||+.|+|||++.+ ..++.++||||+|++++++.....++....
T Consensus 168 ~Dfg~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 243 (313)
T 3cek_A 168 IDFGIANQMQPDTT----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 243 (313)
T ss_dssp CCCSSSCC------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred eeccccccccCccc----cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH
Confidence 99999986632211 111234579999999999876 478999999999987777654444333221
Q ss_pred chhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 853 ENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 853 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
.... .+......... ...+......+.+++.+||+.||++||+++|+++
T Consensus 244 ~~~~-----~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 244 NQIS-----KLHAIIDPNHE--IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp SHHH-----HHHHHHCTTSC--CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHH-----HHHHHHhcccc--cCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 1110 11111110000 0000011122233777999999999999999985
No 304
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.95 E-value=5.7e-30 Score=301.38 Aligned_cols=238 Identities=21% Similarity=0.216 Sum_probs=163.9
Q ss_pred hCCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHHHHHccCCccccceeeecccCCC-CCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDS-KNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-~~~~~ 721 (929)
.++|+..+.||+|+||.||+|.+.. ..+.+.+|++++++++||||+++++++..... .....
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 3689999999999999999987641 24568899999999999999999999755221 12345
Q ss_pred EEEEEEecCCCCccccccccc-----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCc---eEEeccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER-----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMT---AKVGDFG 787 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~-----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~---~ki~DfG 787 (929)
.++||||+++|+|.+++.... .++.+++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 799999999999999986432 2367899999999998 9999999999999997664 9999999
Q ss_pred cccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc--hhhhc-------
Q 002376 788 LARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE--NVLQV------- 858 (929)
Q Consensus 788 la~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~--~~~~~------- 858 (929)
+++..... .......||+.|+|||++.+..++.++||||+|++++++..+..++..... .+...
T Consensus 170 ~a~~~~~~-------~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~ 242 (676)
T 3qa8_A 170 YAKELDQG-------ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNE 242 (676)
T ss_dssp CCCBTTSC-------CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC-----
T ss_pred cccccccc-------cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccch
Confidence 99865321 112345799999999999999999999999999887776555444322110 00000
Q ss_pred ---cChHHHHhh--cccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHH
Q 002376 859 ---LDPELRQLM--TSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREAL 907 (929)
Q Consensus 859 ---~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~ 907 (929)
......+.. .............+...+.+++.+|++.||++|||++|++
T Consensus 243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 000000000 0000000011122333444588899999999999998843
No 305
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.95 E-value=4.7e-30 Score=286.53 Aligned_cols=171 Identities=22% Similarity=0.315 Sum_probs=137.2
Q ss_pred hCCCCCceeecccCceeEEeccccC----------------cHHHHHHHHHHHHccCCcc------ccceeeecccCCCC
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG----------------SWKSFIAECETLRNVRHRN------LVKLITSCSSLDSK 717 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~----------------~~~~~~~E~~~l~~l~Hpn------iv~l~~~~~~~~~~ 717 (929)
.++|+..+.||+|+||+||+|.... ..+.+.+|+.++++++|++ ++.+.+++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~---- 93 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF---- 93 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE----
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee----
Confidence 3689999999999999999986531 1356788999999998776 8888888744
Q ss_pred CcceEEEEEEecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeee------------
Q 002376 718 NMEFLALVYEFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILL------------ 775 (929)
Q Consensus 718 ~~~~~~lV~e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl------------ 775 (929)
....++||||+ +|++.+++.... .++.|++.||+|||+. +|+||||||+|||+
T Consensus 94 -~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 94 -HGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp -TTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC
T ss_pred -CCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccc
Confidence 33589999999 667777665322 3467999999999998 99999999999999
Q ss_pred -------cCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhh
Q 002376 776 -------DEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVE 848 (929)
Q Consensus 776 -------~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~ 848 (929)
+.++.+||+|||+++.... ......||+.|+|||++.+..++.++||||+|++++++.....++
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 239 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHE---------HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF 239 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTS---------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred ccccccccCCCcEEEeecCccccccc---------cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCC
Confidence 5678999999999986421 122347999999999999999999999999998877765544333
No 306
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=9.5e-30 Score=278.63 Aligned_cols=250 Identities=21% Similarity=0.247 Sum_probs=215.6
Q ss_pred cCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCcc-ccccCCCCC-------CCCcccEEEeeCCCCCcccCc
Q 002376 324 LTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHI-YGKIPASIG-------RLRSLTLLDLSYNSISGEIPI 395 (929)
Q Consensus 324 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~ 395 (929)
++..++|++|++++|.+ .+|..+.. .|+.|+|++|++ .+.+|..+. ++++|++|+|++|++++.+|.
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~---~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTD---IIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHH---HHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHH---HHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 45567889999999999 78887765 389999999999 455666655 789999999999999999998
Q ss_pred cc--cCCCCCCEEEecCCcCCCCCcccccCC-----CCCceecccCcccccccCcccccccccceecccCCcCCCCCCCC
Q 002376 396 EI--GQLQGLQVLGLAGNEIPGGIPNSLANL-----KKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKG 468 (929)
Q Consensus 396 ~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~ 468 (929)
.+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|+++++|++|+|++|++.|.++
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-- 190 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERG-- 190 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHH--
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchH--
Confidence 87 8999999999999999987 8888877 999999999999999888999999999999999999876431
Q ss_pred cccCCchhh--hcccCccEEEecCCCCCCC--CC-cchhcCcCcceeecccccccccCC-ccccCCCCCCEEECCCCcCC
Q 002376 469 ILRPLPEEI--SRLENVVTIDLSDNSLSGN--LP-NSLKNCKSLEELLMAYNQFSGPIP-NIVAELKGLEVLDLSSNKLS 542 (929)
Q Consensus 469 ~~~~~p~~~--~~l~~L~~LdLs~N~l~~~--~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~ 542 (929)
+|..+ ..+++|++|+|++|++++. ++ ..+.++++|++|+|++|+|++.+| ..+..+++|++|+|++|+|+
T Consensus 191 ----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 191 ----LISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK 266 (312)
T ss_dssp ----HHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS
T ss_pred ----HHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC
Confidence 13444 7889999999999999842 22 345688999999999999999875 56777999999999999999
Q ss_pred CcCCcccccCCCCCeEeCCCCcCcccCCCCCCCCCCCcccccCCCCC
Q 002376 543 GSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVHLKGNPKL 589 (929)
Q Consensus 543 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~N~~~ 589 (929)
.+|..+. ++|++|||++|++++. |....+++++.+++++|+..
T Consensus 267 -~ip~~~~--~~L~~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 267 -QVPKGLP--AKLSVLDLSYNRLDRN-PSPDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp -SCCSSCC--SEEEEEECCSSCCCSC-CCTTTSCEEEEEECTTCTTT
T ss_pred -hhhhhcc--CCceEEECCCCCCCCC-hhHhhCCCCCEEeccCCCCC
Confidence 7888776 8999999999999998 65667889999999999864
No 307
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.95 E-value=7.7e-30 Score=309.27 Aligned_cols=227 Identities=22% Similarity=0.266 Sum_probs=164.4
Q ss_pred hCCCCCceeecccCceeEEeccccC------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.++|+..+.||+|+||.||+|++.. ..+.|.+|++++++++|||||++++++...+..+...
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 3689999999999999999986531 1346789999999999999999999997655433444
Q ss_pred EEEEEEecCCCCcccccccc------ccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGE------RKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~------~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
.|+||||+++++|.+++... ..++.||+.||+|||+. +||||||||+|||++++ .+||+|||+++....
T Consensus 159 ~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~- 233 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS- 233 (681)
T ss_dssp EEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETTC-
T ss_pred eEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhccc-
Confidence 79999999999999987542 23467999999999998 99999999999999986 899999999986531
Q ss_pred cCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTI 875 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 875 (929)
.....||++|||||++.++. +.++||||+|++++++.. +..+... ...+ .+ ... ....
T Consensus 234 ---------~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~-----g~~~~~~-~~~~-~~----~~~-~~~~ 291 (681)
T 2pzi_A 234 ---------FGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTL-----DLPTRNG-RYVD-GL----PED-DPVL 291 (681)
T ss_dssp ---------CSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHS-----CCCEETT-EECS-SC----CTT-CHHH
T ss_pred ---------CCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHh-----CCCCCcc-cccc-cc----ccc-cccc
Confidence 13357999999999987654 899999999987666432 2222110 0000 00 000 0000
Q ss_pred hhhHHHHHHHHHHhccccCCCCCCCC-CHHHHHHHHHhhHHHH
Q 002376 876 QLHDCLITIIGSVGLSCTTESPGGRI-GIREALRRLKSSQEIL 917 (929)
Q Consensus 876 ~~~~~~~~~~~~l~~~Cl~~dP~~RP-s~~ev~~~L~~~~~~~ 917 (929)
. ....+.+++.+||+.||++|| +++++...+..+.+..
T Consensus 292 ~----~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~ 330 (681)
T 2pzi_A 292 K----TYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV 330 (681)
T ss_dssp H----HCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred c----cCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence 0 112223377799999999999 5677777787776543
No 308
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.95 E-value=1.7e-30 Score=286.82 Aligned_cols=229 Identities=20% Similarity=0.226 Sum_probs=141.1
Q ss_pred hCCCCCceeecccCceeEEeccccC-----------------cHHHHHHHHH-HHHccCCccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-----------------SWKSFIAECE-TLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~~~~~E~~-~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.++|+..+.||+|+||.||+|.... ..+++.+|+. +++.++||||+++++++... ..
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~-----~~ 95 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFRE-----GD 95 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECS-----SE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeC-----Cc
Confidence 4678889999999999999987651 1234556666 67778999999999998653 34
Q ss_pred EEEEEEecCCCCccccccc-------------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccc
Q 002376 722 LALVYEFLSNGSLGDWIHG-------------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGL 788 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~-------------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGl 788 (929)
.++||||+++ +|.+++.. ...++.+++.||+|||+. .+|+||||||+||+++.++.+||+|||+
T Consensus 96 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 172 (327)
T 3aln_A 96 CWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGI 172 (327)
T ss_dssp EEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSS
T ss_pred eEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCC
Confidence 8999999974 77766641 113367899999999985 2799999999999999999999999999
Q ss_pred ccccccccCCCCCccccceecccccccccccc----CCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHH
Q 002376 789 ARFLLERVDNQSSISSTHVFMGSIGYVPPEYG----LGERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELR 864 (929)
Q Consensus 789 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 864 (929)
++..... .......||+.|+|||++ .+..++.++||||+|++++++.....++...... .+.+.....
T Consensus 173 ~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~ 244 (327)
T 3aln_A 173 SGQLVDS-------IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-FDQLTQVVK 244 (327)
T ss_dssp SCC-------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------CCCCC
T ss_pred ceecccc-------cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH-HHHHHHHhc
Confidence 9865321 112234799999999998 4667899999999998777765544433222110 011111000
Q ss_pred Hhhcccc-hhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 865 QLMTSNE-SQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 865 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
....... ......++ .+.+++.+||+.||++||+++|+++
T Consensus 245 ~~~~~~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 245 GDPPQLSNSEEREFSP----SFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp SCCCCCCCCSSCCCCH----HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCCCcccccCCH----HHHHHHHHHhhCChhhCcCHHHHHh
Confidence 0000000 00001112 2233777999999999999999964
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=4.9e-28 Score=261.53 Aligned_cols=235 Identities=21% Similarity=0.238 Sum_probs=191.6
Q ss_pred CCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCC-CCcccCccccCCCCCCEE
Q 002376 328 THLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNS-ISGEIPIEIGQLQGLQVL 406 (929)
Q Consensus 328 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L 406 (929)
++|++|+|++|++++..+..+..+. +|++|+|++|.+++..|..|.++++|++|+|++|. ++...|..|..+++|++|
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACR-NLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCT-TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCC-CCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 5777888888888766666677766 78888888888888888888888888999998887 776668888888889999
Q ss_pred EecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEE
Q 002376 407 GLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTI 486 (929)
Q Consensus 407 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~L 486 (929)
++++|++++..|..|.++++|++|++++|++++..+..|.++++|++|+|++|++++ ++ +..+..+++|+.|
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~-------~~~~~~l~~L~~L 182 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS-VP-------ERAFRGLHSLDRL 182 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE-EC-------TTTTTTCTTCCEE
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccc-cC-------HHHhcCccccCEE
Confidence 999998888888888888899999999999887777778888899999999998874 22 3356778889999
Q ss_pred EecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCc
Q 002376 487 DLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLE 566 (929)
Q Consensus 487 dLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 566 (929)
+|++|++++..|..|.++++|+.|++++|++++.++..+..+++|+.|+|++|.+....+.. .-...++.+..+.|.+.
T Consensus 183 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~ 261 (285)
T 1ozn_A 183 LLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVP 261 (285)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCB
T ss_pred ECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccc
Confidence 99999999888899999999999999999999887788999999999999999998654321 11233555667788888
Q ss_pred ccCCCC
Q 002376 567 GVVPSE 572 (929)
Q Consensus 567 ~~~p~~ 572 (929)
+..|..
T Consensus 262 c~~p~~ 267 (285)
T 1ozn_A 262 CSLPQR 267 (285)
T ss_dssp EEESGG
T ss_pred cCCchH
Confidence 888864
No 310
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.95 E-value=1.9e-30 Score=285.38 Aligned_cols=220 Identities=22% Similarity=0.240 Sum_probs=162.9
Q ss_pred HHhhCCCCCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHccC--Cccccceeeecc
Q 002376 657 RRATGNFSHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVR--HRNLVKLITSCS 712 (929)
Q Consensus 657 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~--Hpniv~l~~~~~ 712 (929)
....++|+..+.||+|+||.||+|+... ..+.+.+|+.++++++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 3445689999999999999999987541 1134668999999996 599999999995
Q ss_pred cCCCCCcceEEEEEEecCC-CCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeec-CCCceE
Q 002376 713 SLDSKNMEFLALVYEFLSN-GSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLD-EEMTAK 782 (929)
Q Consensus 713 ~~~~~~~~~~~lV~e~~~~-gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~-~~~~~k 782 (929)
.. ...++||||+.+ ++|.+++.... .++.|++.||+|||+. +|+||||||+||+++ +++.+|
T Consensus 119 ~~-----~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~k 190 (320)
T 3a99_A 119 RP-----DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELK 190 (320)
T ss_dssp CS-----SEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEE
T ss_pred cC-----CcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEE
Confidence 43 348999999976 89999886432 3467999999999998 999999999999999 789999
Q ss_pred EeccccccccccccCCCCCccccceeccccccccccccCCCCC-CCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccCh
Q 002376 783 VGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERP-STAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDP 861 (929)
Q Consensus 783 i~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (929)
|+|||+++..... ......||+.|+|||++.+..+ +.++||||+|++++++.. +..|..... .
T Consensus 191 L~Dfg~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~-----g~~pf~~~~---~ 254 (320)
T 3a99_A 191 LIDFGSGALLKDT--------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC-----GDIPFEHDE---E 254 (320)
T ss_dssp ECCCTTCEECCSS--------CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHH-----SSCSCCSHH---H
T ss_pred EeeCccccccccc--------cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHH-----CCCCCCChh---h
Confidence 9999999865321 1223479999999999887765 788999999977666543 433331100 0
Q ss_pred HHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 862 ELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 862 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..... .......++ .+.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~----~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 255 IIRGQ----VFFRQRVSS----ECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp HHHCC----CCCSSCCCH----HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhccc----ccccccCCH----HHHHHHHHHccCChhhCcCHHHHhc
Confidence 01110 000111112 2233777999999999999999986
No 311
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.95 E-value=4.5e-30 Score=281.38 Aligned_cols=222 Identities=23% Similarity=0.281 Sum_probs=157.6
Q ss_pred HHHHhhCCCCCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHcc----CCcccccee
Q 002376 655 ELRRATGNFSHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNV----RHRNLVKLI 708 (929)
Q Consensus 655 ~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l----~Hpniv~l~ 708 (929)
+.....++|+..+.||+|+||.||+|+... ....+.+|+.++.++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 344456789999999999999999997641 112355799999998 899999999
Q ss_pred eecccCCCCCcceEEEEEEe-cCCCCccccccccc--------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeec-CC
Q 002376 709 TSCSSLDSKNMEFLALVYEF-LSNGSLGDWIHGER--------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLD-EE 778 (929)
Q Consensus 709 ~~~~~~~~~~~~~~~lV~e~-~~~gsL~~~l~~~~--------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~-~~ 778 (929)
+++... ...++|||| +++++|.+++.... .++.|++.||+|||+. +|+||||||+||+++ ++
T Consensus 105 ~~~~~~-----~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 176 (312)
T 2iwi_A 105 DWFETQ-----EGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRR 176 (312)
T ss_dssp EEC----------CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTT
T ss_pred EEEecC-----CeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCC
Confidence 998543 347999999 78999999986432 3467899999999998 999999999999999 88
Q ss_pred CceEEeccccccccccccCCCCCccccceeccccccccccccCCCCC-CCCCCCCCCcCCCCCcchhHHhhhcCCchhhh
Q 002376 779 MTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERP-STAGDVPTSESFAGEFNIVKWVESNLPENVLQ 857 (929)
Q Consensus 779 ~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~ 857 (929)
+.+||+|||+++..... ......||+.|+|||++.+..+ +.++||||+|++++++.. +..+....+
T Consensus 177 ~~~kl~dfg~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-----g~~pf~~~~ 243 (312)
T 2iwi_A 177 GCAKLIDFGSGALLHDE--------PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVC-----GDIPFERDQ 243 (312)
T ss_dssp TEEEECCCSSCEECCSS--------CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHH-----SSCSCCSHH
T ss_pred CeEEEEEcchhhhcccC--------cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHH-----CCCCCCChH
Confidence 99999999999865321 1233568999999999887766 458999999977666544 333331100
Q ss_pred ccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 858 VLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 858 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..... ........ ...+.+++.+||+.||++|||++|+++
T Consensus 244 ----~~~~~---~~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 244 ----EILEA---ELHFPAHV----SPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp ----HHHHT---CCCCCTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ----HHhhh---ccCCcccC----CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11110 00000111 122233777999999999999999987
No 312
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.95 E-value=2.4e-29 Score=276.25 Aligned_cols=228 Identities=20% Similarity=0.215 Sum_probs=142.7
Q ss_pred hCCCCCceeecccCceeEEeccccC-----------------c-HHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG-----------------S-WKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~-~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
.++|+..+.||+|+||.||+|+... . .+.+..+..+++.++||||+++++++... ..
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~-----~~ 98 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITN-----TD 98 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----SE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecC-----Cc
Confidence 4578889999999999999987641 1 12334455578888999999999998643 34
Q ss_pred EEEEEEecCCCCccccccc---------cccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHG---------ERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~---------~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.++||||+ ++.+..+... ...++.+++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++..
T Consensus 99 ~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 99 VFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp EEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred EEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC--CEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 89999999 4444443321 1134678999999999831 8999999999999999999999999999765
Q ss_pred ccccCCCCCccccceeccccccccccccC-----CCCCCCCCCCCCCcCCCCCcchhHHhhhcCCchhhhccChHHHHhh
Q 002376 793 LERVDNQSSISSTHVFMGSIGYVPPEYGL-----GERPSTAGDVPTSESFAGEFNIVKWVESNLPENVLQVLDPELRQLM 867 (929)
Q Consensus 793 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 867 (929)
... .......||+.|+|||++. +..++.++||||+|++++++.....++...... .+.+.......
T Consensus 176 ~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~- 246 (318)
T 2dyl_A 176 VDD-------KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD-FEVLTKVLQEE- 246 (318)
T ss_dssp ------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH-HHHHHHHHHSC-
T ss_pred cCC-------ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc-HHHHHHHhccC-
Confidence 321 1123347899999999984 556899999999998777765544443322111 11111111110
Q ss_pred cccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 868 TSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
..........+.. +.+++.+||+.||++||+++|+++
T Consensus 247 ~~~~~~~~~~~~~----l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 247 PPLLPGHMGFSGD----FQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CCCCCSSSCCCHH----HHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCCCccCCCCHH----HHHHHHHHccCChhHCcCHHHHhh
Confidence 0000000011122 223777999999999999999975
No 313
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=7.5e-29 Score=272.13 Aligned_cols=270 Identities=18% Similarity=0.154 Sum_probs=208.6
Q ss_pred CcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecc
Q 002376 71 NRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDL 150 (929)
Q Consensus 71 ~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 150 (929)
.+....+++.+.+...+...+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..| |..+++|++|+|
T Consensus 10 ~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp TEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred CceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 356667788888776555566678899999999999998888899999999999999999997665 899999999999
Q ss_pred cccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEE
Q 002376 151 MANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLR 230 (929)
Q Consensus 151 s~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 230 (929)
++|++++ +...++|++|++++|++++..+ ..+++|+.|+|++|++++..+..|..+++|++|+
T Consensus 88 s~n~l~~------l~~~~~L~~L~l~~n~l~~~~~-----------~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 150 (317)
T 3o53_A 88 NNNYVQE------LLVGPSIETLHAANNNISRVSC-----------SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLD 150 (317)
T ss_dssp CSSEEEE------EEECTTCCEEECCSSCCSEEEE-----------CCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEE
T ss_pred cCCcccc------ccCCCCcCEEECCCCccCCcCc-----------cccCCCCEEECCCCCCCCccchhhhccCCCCEEE
Confidence 9999983 3455899999999998865322 2357899999999999998888999999999999
Q ss_pred eeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceecccccccc
Q 002376 231 LASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIV 310 (929)
Q Consensus 231 Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~ 310 (929)
|++|++++..+..+...+++|++|++++|++++..+ ...+++|+.|+|++|+|++. |..|..+++|+.|++++|+|.
T Consensus 151 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 151 LKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp CTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC
T ss_pred CCCCCCCcccHHHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc
Confidence 999999876666666568888888888888876622 23478888888888888854 444777777777777777776
Q ss_pred CCCCCCCCccccccCCCCCCCEEEccCCccc-cccCchhhhccccccEEEec-CCccccccCC
Q 002376 311 SSGDDEGLSFITSLTNSTHLNYLALDGNQFE-GKIPESIGNFSNELSKLYLG-GNHIYGKIPA 371 (929)
Q Consensus 311 ~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~~~~~L~~L~Ls-~N~l~~~~p~ 371 (929)
.++ ..+..+++|++|+|++|.+. +.+|..+..++ .|+.|+++ .+.++|..|.
T Consensus 228 ~l~--------~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~-~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 228 LIE--------KALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQ-RVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp EEC--------TTCCCCTTCCEEECTTCCCBHHHHHHHHHTCH-HHHHHHHHHHHHHHSSSSC
T ss_pred chh--------hHhhcCCCCCEEEccCCCccCcCHHHHHhccc-cceEEECCCchhccCCchh
Confidence 543 24556677777777777776 55666666655 57777776 3345554443
No 314
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=4.9e-29 Score=273.59 Aligned_cols=246 Identities=22% Similarity=0.220 Sum_probs=129.8
Q ss_pred CCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCC
Q 002376 248 LPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNS 327 (929)
Q Consensus 248 l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l 327 (929)
+++|++|++++|++++..|..|.++++|+.|+|++|.+++..+ |..+++|++|++++|++..++ ..
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~------------~~ 98 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL------------VG 98 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE------------EC
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc------------CC
Confidence 3344444444444444444555555666666666666654433 444444555444444443211 12
Q ss_pred CCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEE
Q 002376 328 THLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLG 407 (929)
Q Consensus 328 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 407 (929)
++ |++|++++|++++..+.. +++|++|+|++|++++..+..+..+++|++|+
T Consensus 99 ~~-------------------------L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 150 (317)
T 3o53_A 99 PS-------------------------IETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLD 150 (317)
T ss_dssp TT-------------------------CCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEE
T ss_pred CC-------------------------cCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEE
Confidence 34 444444444444433332 34455555555555554455555555555555
Q ss_pred ecCCcCCCCCccccc-CCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEE
Q 002376 408 LAGNEIPGGIPNSLA-NLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTI 486 (929)
Q Consensus 408 L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~L 486 (929)
|++|++++..+..+. .+++|++|+|++|++++..+ ...+++|++|+|++|+|++ + |..+..+++|+.|
T Consensus 151 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~-l--------~~~~~~l~~L~~L 219 (317)
T 3o53_A 151 LKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAF-M--------GPEFQSAAGVTWI 219 (317)
T ss_dssp CTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCE-E--------CGGGGGGTTCSEE
T ss_pred CCCCCCCcccHHHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCc-c--------hhhhcccCcccEE
Confidence 555555554444442 45555666666665554321 1235566666666666553 1 3345555666666
Q ss_pred EecCCCCCCCCCcchhcCcCcceeeccccccc-ccCCccccCCCCCCEEECCC-CcCCCcCCc
Q 002376 487 DLSDNSLSGNLPNSLKNCKSLEELLMAYNQFS-GPIPNIVAELKGLEVLDLSS-NKLSGSIPS 547 (929)
Q Consensus 487 dLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~ 547 (929)
||++|+++ .+|..+..+++|+.|++++|.++ +.+|..+..+++|+.|++++ +.++|..|.
T Consensus 220 ~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 220 SLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp ECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred ECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 66666666 34555666666666666666666 55666666666666666663 345554443
No 315
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.95 E-value=4.6e-29 Score=276.45 Aligned_cols=161 Identities=19% Similarity=0.195 Sum_probs=126.5
Q ss_pred hCCCCCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHccC-----------------
Q 002376 660 TGNFSHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVR----------------- 700 (929)
Q Consensus 660 ~~~~~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~----------------- 700 (929)
.++|+..+.||+|+||+||+|++.+ ..+.+.+|+++++.++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 3568889999999999999987642 1277899999999886
Q ss_pred ---------CccccceeeecccCCC--------CCcceEEEEEEecCCCCcccccccc-------ccccccHHHHHHHhh
Q 002376 701 ---------HRNLVKLITSCSSLDS--------KNMEFLALVYEFLSNGSLGDWIHGE-------RKNELDITSALDYLH 756 (929)
Q Consensus 701 ---------Hpniv~l~~~~~~~~~--------~~~~~~~lV~e~~~~gsL~~~l~~~-------~~~~~~ia~aL~yLH 756 (929)
|||||++++++.+... ......|+||||+++|++.+.+.+. +.++.||+.||+|||
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH 178 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAE 178 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 5555555555543100 0144689999999999777666432 234679999999999
Q ss_pred -hCCCCCEEecCCCCCCeeecCCC--------------------ceEEeccccccccccccCCCCCccccceeccccccc
Q 002376 757 -NDCEVPVVHSDLKPGNILLDEEM--------------------TAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYV 815 (929)
Q Consensus 757 -~~~~~~iiHrDlk~~NILl~~~~--------------------~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~ 815 (929)
+. +|+||||||+|||++.++ .+||+|||+|+.... ...+||+.||
T Consensus 179 ~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-----------~~~~gt~~y~ 244 (336)
T 2vuw_A 179 ASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-----------GIVVFCDVSM 244 (336)
T ss_dssp HHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-----------TEEECCCCTT
T ss_pred HhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-----------CcEEEeeccc
Confidence 77 999999999999999887 899999999986531 1347999999
Q ss_pred cccccCCCCCCCCCCCCCCc
Q 002376 816 PPEYGLGERPSTAGDVPTSE 835 (929)
Q Consensus 816 aPE~~~~~~~~~~~DV~s~g 835 (929)
|||++.+.. +.++||||++
T Consensus 245 aPE~~~g~~-~~~~Diwsl~ 263 (336)
T 2vuw_A 245 DEDLFTGDG-DYQFDIYRLM 263 (336)
T ss_dssp CSGGGCCCS-SHHHHHHHHH
T ss_pred ChhhhcCCC-ccceehhhhh
Confidence 999998776 8999999974
No 316
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.95 E-value=2.5e-29 Score=271.36 Aligned_cols=213 Identities=11% Similarity=0.089 Sum_probs=153.8
Q ss_pred CCCCCceeecccCceeEEeccccC-------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 661 GNFSHENLIGSGSFGSVLHNERTG-------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 661 ~~~~~~~~iG~G~~g~Vy~~~~~~-------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
++|+..+.||+|+||.||+|++.. ..+.|.+|+..+++++||||+++++++... ..
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~-----~~ 105 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTR-----AG 105 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-----TE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEEC-----Cc
Confidence 579999999999999999987651 126789999999999999999999998543 34
Q ss_pred EEEEEEecCCCCccccccccc------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccc
Q 002376 722 LALVYEFLSNGSLGDWIHGER------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLER 795 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 795 (929)
.|+||||+++++|.++++... .++.|++.||+|||+. +|+||||||+|||+++++.+||+++|
T Consensus 106 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~-------- 174 (286)
T 3uqc_A 106 GLVVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA-------- 174 (286)
T ss_dssp EEEEEECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred EEEEEEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc--------
Confidence 899999999999999986432 3467899999999998 99999999999999999999987443
Q ss_pred cCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhcccchhh
Q 002376 796 VDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMTSNESQT 874 (929)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~ 874 (929)
|++| ++.++||||+|+++|++.....++..... .....................
T Consensus 175 ------------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T 3uqc_A 175 ------------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADID 229 (286)
T ss_dssp ------------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHC
T ss_pred ------------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcc
Confidence 4443 68899999999887776665554432221 000000011111000000001
Q ss_pred hhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHhhHHHHhh
Q 002376 875 IQLHDCLITIIGSVGLSCTTESPGGRIGIREALRRLKSSQEILLK 919 (929)
Q Consensus 875 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 919 (929)
.. +...+++++.+||+.||++| |++|+++.|+++......
T Consensus 230 ~~----~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~~ 269 (286)
T 3uqc_A 230 RD----IPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVADR 269 (286)
T ss_dssp TT----SCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC----
T ss_pred cC----CCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCCc
Confidence 11 22223347779999999999 999999999998776543
No 317
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.3e-26 Score=248.03 Aligned_cols=217 Identities=25% Similarity=0.314 Sum_probs=155.8
Q ss_pred CCCCCCcceeeCCCCCcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCc
Q 002376 56 SSPCTWPGVICNNFGNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGEL 135 (929)
Q Consensus 56 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 135 (929)
.++|.|.|+.|.... .++.+++++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++...
T Consensus 2 ~~~C~~~~~~C~c~~-~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCNN-NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEET-TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeCC-CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 478999999986532 4567899999988 5777665 68899999999998777778899999999999999998766
Q ss_pred ccccccccccceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCc
Q 002376 136 PVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGT 215 (929)
Q Consensus 136 p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~ 215 (929)
+..|.++++|++|+|++|+++ .++...|.++++|++|+|++|++++. .+..|..+++|++|+|++|+|++.
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~--------~~~~~~~l~~L~~L~Ls~n~l~~~ 148 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSL--------PPRVFDSLTKLTYLSLGYNELQSL 148 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCC-CCCTTTTTTCSSCCEEECCSSCCCCC--------CTTTTTTCTTCCEEECCSSCCCCC
T ss_pred hhhhcCCCCCCEEECCCCcCC-cCCHhHcccccCCCEEECCCCccCee--------CHHHhCcCcCCCEEECCCCcCCcc
Confidence 667788889999999999887 56666678888888888888876442 334566777888888888888777
Q ss_pred cCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCc
Q 002376 216 VPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLE 286 (929)
Q Consensus 216 ~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 286 (929)
.+..|..+++|++|+|++|+++ .+|...+..+++|+.|++++|++++..+..|..+++|+.|+|++|.+.
T Consensus 149 ~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 149 PKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CHhHccCCcccceeEecCCcCc-EeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 6667777777777777777776 344333333455555555555554444444444444444444444443
No 318
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=2.6e-26 Score=272.00 Aligned_cols=267 Identities=24% Similarity=0.316 Sum_probs=133.0
Q ss_pred cccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEec
Q 002376 201 NLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRM 280 (929)
Q Consensus 201 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~L 280 (929)
+++.|++++|.|+ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|++++|++++ +|. .+++|++|+|
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 108 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA----LPPELRTLEVSGNQLTS-LPV---LPPGLLELSI 108 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC----CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEE
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC----cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEEC
Confidence 5778888888887 5565554 67888888888776 4554 24455555555555543 222 3344445555
Q ss_pred cCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEe
Q 002376 281 THNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYL 360 (929)
Q Consensus 281 s~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L 360 (929)
++|.|++ +|. .+++|++|+|++|++++ +|..+ ++|++|+|
T Consensus 109 s~N~l~~-l~~----------------------------------~l~~L~~L~L~~N~l~~-lp~~l----~~L~~L~L 148 (622)
T 3g06_A 109 FSNPLTH-LPA----------------------------------LPSGLCKLWIFGNQLTS-LPVLP----PGLQELSV 148 (622)
T ss_dssp CSCCCCC-CCC----------------------------------CCTTCCEEECCSSCCSC-CCCCC----TTCCEEEC
T ss_pred cCCcCCC-CCC----------------------------------CCCCcCEEECCCCCCCc-CCCCC----CCCCEEEC
Confidence 5544443 121 22344555555555542 33321 24555555
Q ss_pred cCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccc
Q 002376 361 GGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGE 440 (929)
Q Consensus 361 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 440 (929)
++|+|++. |. .+++|+.|++++|.|++ +| ..+++|+.|++++|+|++ +|.. +++|+.|++++|.++.
T Consensus 149 s~N~l~~l-~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~- 215 (622)
T 3g06_A 149 SDNQLASL-PA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS- 215 (622)
T ss_dssp CSSCCSCC-CC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-
T ss_pred cCCcCCCc-CC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-
Confidence 55555432 22 12345555555555553 33 234455555555555543 2221 2445555555555542
Q ss_pred cCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeeccccccccc
Q 002376 441 IPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGP 520 (929)
Q Consensus 441 ~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 520 (929)
+|.. +++|+.|+|++|+|++ + | ..+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|+ .
T Consensus 216 l~~~---~~~L~~L~Ls~N~L~~-l--------p---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~ 275 (622)
T 3g06_A 216 LPAL---PSGLKELIVSGNRLTS-L--------P---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-R 275 (622)
T ss_dssp CCCC---CTTCCEEECCSSCCSC-C--------C---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-S
T ss_pred cCCC---CCCCCEEEccCCccCc-C--------C---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-c
Confidence 2321 2445555555555543 2 1 122345555555555552 333 3445555555555555 3
Q ss_pred CCccccCCCCCCEEECCCCcCCCcCCcccccC
Q 002376 521 IPNIVAELKGLEVLDLSSNKLSGSIPSDLQNL 552 (929)
Q Consensus 521 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 552 (929)
+|..+..+++|+.|+|++|++++.+|..+..+
T Consensus 276 lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 276 LPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp CCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred CCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 44455555555555555555555555444433
No 319
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=5.8e-28 Score=280.57 Aligned_cols=237 Identities=19% Similarity=0.171 Sum_probs=142.0
Q ss_pred ccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhh
Q 002376 271 NLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGN 350 (929)
Q Consensus 271 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 350 (929)
.+++|+.|+|++|.+++..|..|+.+++|++|+|++|.+.... .+..+++|++|+|++|.|++..+.
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~---------~l~~l~~L~~L~Ls~N~l~~l~~~---- 98 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETL---------DLESLSTLRTLDLNNNYVQELLVG---- 98 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEE---------ECTTCTTCCEEECCSSEEEEEEEC----
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCc---------ccccCCCCCEEEecCCcCCCCCCC----
Confidence 3447788888888887766666666666666666666554321 244555666666666665532211
Q ss_pred ccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCcee
Q 002376 351 FSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQI 430 (929)
Q Consensus 351 ~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 430 (929)
++|++|++++|.|++..+.. +++|++|+|++|.+++..|..+.++++|++|
T Consensus 99 --~~L~~L~L~~N~l~~~~~~~---------------------------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 149 (487)
T 3oja_A 99 --PSIETLHAANNNISRVSCSR---------------------------GQGKKNIYLANNKITMLRDLDEGCRSRVQYL 149 (487)
T ss_dssp --TTCCEEECCSSCCCCEEECC---------------------------CSSCEEEECCSSCCCSGGGBCGGGGSSEEEE
T ss_pred --CCcCEEECcCCcCCCCCccc---------------------------cCCCCEEECCCCCCCCCCchhhcCCCCCCEE
Confidence 14555555555544433322 3445555555555555445555555555555
Q ss_pred cccCcccccccCcccc-cccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcce
Q 002376 431 DLSGNELTGEIPISFG-NFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEE 509 (929)
Q Consensus 431 ~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~ 509 (929)
+|++|.+++..|..|. .+++|+.|+|++|.|++.. ....+++|+.|||++|++++.+| .+..+++|+.
T Consensus 150 ~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~----------~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~ 218 (487)
T 3oja_A 150 DLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK----------GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTW 218 (487)
T ss_dssp ECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE----------CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSE
T ss_pred ECCCCCCCCcChHHHhhhCCcccEEecCCCcccccc----------ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccE
Confidence 5555555555555543 4555666666666555321 11235566777777777765433 4777777788
Q ss_pred eecccccccccCCccccCCCCCCEEECCCCcCC-CcCCcccccCCCCCeEeCC
Q 002376 510 LLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLS-GSIPSDLQNLQALRSLNLT 561 (929)
Q Consensus 510 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls 561 (929)
|+|++|.|++ +|..+..+++|+.|++++|.+. +.+|..+..++.|+.++++
T Consensus 219 L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 219 ISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp EECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred EEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 8888888775 5666777888888888888887 5667777777777777775
No 320
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.94 E-value=3.2e-29 Score=285.29 Aligned_cols=222 Identities=16% Similarity=0.064 Sum_probs=149.9
Q ss_pred hhCCCCCceeecccCceeEEecccc-------------------CcHHHHHHHHHHHHccCC-ccccceeee--------
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERT-------------------GSWKSFIAECETLRNVRH-RNLVKLITS-------- 710 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~-------------------~~~~~~~~E~~~l~~l~H-pniv~l~~~-------- 710 (929)
.+..|+..++||+|+||+||+|++. ...+.|.+|+.+++.++| +|......+
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 3445778899999999999999854 124678899999999987 332221111
Q ss_pred -------------cccCCCCCcceEEEEEEecCCCCccccccc---------------cccccccHHHHHHHhhhCCCCC
Q 002376 711 -------------CSSLDSKNMEFLALVYEFLSNGSLGDWIHG---------------ERKNELDITSALDYLHNDCEVP 762 (929)
Q Consensus 711 -------------~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~---------------~~~~~~~ia~aL~yLH~~~~~~ 762 (929)
+...........+++|+++ +|+|.++++. ...++.|++.||+|||+. +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 231 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 231 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 1100000012357777766 6899988841 112357999999999998 9
Q ss_pred EEecCCCCCCeeecCCCceEEeccccccccccccCCCCCccccceecccccccccccc----------CCCCCCCCCCCC
Q 002376 763 VVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYG----------LGERPSTAGDVP 832 (929)
Q Consensus 763 iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DV~ 832 (929)
|+||||||+|||++.++.+||+|||+++..... ....+| +.|||||++ .+..++.++|||
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~Dvw 301 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTW 301 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTEE---------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCCc---------cccCCC-CceeCchhhhccccccccccCcCCCchhhHH
Confidence 999999999999999999999999999864321 233477 999999999 666689999999
Q ss_pred CCcCCCCCcchhHHhhhcCCchhhhccChHHHHhhcccchhhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 833 TSESFAGEFNIVKWVESNLPENVLQVLDPELRQLMTSNESQTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 833 s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
|+|+++|++.....++.... ..+.....+. .. ...++. +++++.+||+.||++||++.|+++
T Consensus 302 SlGvil~elltg~~Pf~~~~--~~~~~~~~~~----~~----~~~~~~----~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 302 TLGLAIYWIWCADLPNTDDA--ALGGSEWIFR----SC----KNIPQP----VRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHHHHHHHHSSCCCCTTG--GGSCSGGGGS----SC----CCCCHH----HHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHHCCCCCCCcc--hhhhHHHHHh----hc----ccCCHH----HHHHHHHHccCChhhCcCHHHHHh
Confidence 99987777654443332111 1111111111 00 011122 333777999999999999888853
No 321
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=1.7e-30 Score=311.38 Aligned_cols=459 Identities=13% Similarity=0.083 Sum_probs=227.2
Q ss_pred CCCCCcceeeCCCCCcEEEEEcCCCCCccccC-CCCCCCCCCCEEEeecCCCC---CCCCcC------------CCCCCC
Q 002376 57 SPCTWPGVICNNFGNRVIGLNLSSFGLEGTIS-PHIGNLSFLRSIQLQNNKLS---GNLPRE------------IGNLFR 120 (929)
Q Consensus 57 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~-~~l~~L~~L~~L~Ls~N~l~---~~~p~~------------~~~l~~ 120 (929)
-|++|.++... ....+++++.. +..| ..+..+++|++|+|+++... +..|.. +..+++
T Consensus 33 vck~W~~~~~~----~~~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~ 106 (594)
T 2p1m_B 33 VCKSWYEIERW----CRRKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTW 106 (594)
T ss_dssp SCHHHHHHHHH----HCCEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTT
T ss_pred HHHHHHHhhhh----hceEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCC
Confidence 45579888321 22345555432 2222 23567789999999997632 122322 235678
Q ss_pred CcEEeCCCCCCCCCcccccc-cccccceeccccc-ccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCC
Q 002376 121 LRVLNISFNNLQGELPVNIS-KLTELKMLDLMAN-KITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSR 198 (929)
Q Consensus 121 L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N-~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~ 198 (929)
|++|+|++|.+++..+..+. .+++|++|+|++| .++.......+.++++|++|+|++|.+++..+..+.. ....
T Consensus 107 L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~----~~~~ 182 (594)
T 2p1m_B 107 LEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSH----FPDT 182 (594)
T ss_dssp CCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGG----SCTT
T ss_pred CCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHH----Hhhc
Confidence 88888888888877666665 6788888888888 4542212233457888888888888876654443332 2345
Q ss_pred CCcccEEEeeccc--CCCc-cCCccccCCCCceEEeeec-CCCCcCCcccccCCCCcceeeccCCcCCCCCCCccccccc
Q 002376 199 LENLKVLDLTINR--LAGT-VPSTIYNMTSLVHLRLASN-QLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTN 274 (929)
Q Consensus 199 l~~L~~L~Ls~N~--l~~~-~p~~~~~l~~L~~L~Ls~N-~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~ 274 (929)
+++|+.|+|++|. ++.. ++..+.++++|++|+|++| .+. .+|..+. .+++|++|.++.+..
T Consensus 183 ~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~-~~~~L~~L~l~~~~~------------- 247 (594)
T 2p1m_B 183 YTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQ-RAPQLEELGTGGYTA------------- 247 (594)
T ss_dssp CCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHH-HCTTCSEEECSBCCC-------------
T ss_pred CCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHh-cCCcceEcccccccC-------------
Confidence 6778888888776 2211 1112234577777777776 222 2333222 255555555433211
Q ss_pred ccEEeccCccCcCCccCCCCCCCcccee-ccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCch-hhhcc
Q 002376 275 IQIIRMTHNLLEGTLPPGLGNLPFLRTY-NIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPES-IGNFS 352 (929)
Q Consensus 275 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L-~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~~~ 352 (929)
+++.|.+.+ ++..+.++++|+.+ .+....... +...+..+++|++|+|++|.+++..... +..++
T Consensus 248 ----~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~~~--------l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~ 314 (594)
T 2p1m_B 248 ----EVRPDVYSG-LSVALSGCKELRCLSGFWDAVPAY--------LPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCP 314 (594)
T ss_dssp ----CCCHHHHHH-HHHHHHTCTTCCEEECCBTCCGGG--------GGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCT
T ss_pred ----ccchhhHHH-HHHHHhcCCCcccccCCcccchhh--------HHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCC
Confidence 011222222 11233344444443 111111000 0011123445555555555544322222 12222
Q ss_pred ccccEEEecCCccccc-cCCCCCCCCcccEEEee---------CCCCCcccCcccc-CCCCCCEEEecCCcCCCCCcccc
Q 002376 353 NELSKLYLGGNHIYGK-IPASIGRLRSLTLLDLS---------YNSISGEIPIEIG-QLQGLQVLGLAGNEIPGGIPNSL 421 (929)
Q Consensus 353 ~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls---------~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~ 421 (929)
+|++|++++| +... ++.....+++|++|+|+ .|.+++.....+. .+++|+.|+++.|.+++..+..+
T Consensus 315 -~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l 392 (594)
T 2p1m_B 315 -KLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITI 392 (594)
T ss_dssp -TCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHH
T ss_pred -CcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHH
Confidence 4555555554 2211 11111234555555552 2334332222222 25556666555555554433333
Q ss_pred c-CCCCCceeccc--C----ccccc-----ccCcccccccccceecccCCcCCCCCCCCcccCCchhhhc-ccCccEEEe
Q 002376 422 A-NLKKLNQIDLS--G----NELTG-----EIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISR-LENVVTIDL 488 (929)
Q Consensus 422 ~-~l~~L~~L~Ls--~----N~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~-l~~L~~LdL 488 (929)
. .+++|+.|+|+ + |.+++ .++..+.++++|+.|+|++ .+++.. +..+.. +++|+.|+|
T Consensus 393 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~--------~~~l~~~~~~L~~L~L 463 (594)
T 2p1m_B 393 ARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKV--------FEYIGTYAKKMEMLSV 463 (594)
T ss_dssp HHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHH--------HHHHHHHCTTCCEEEE
T ss_pred HhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHH--------HHHHHHhchhccEeec
Confidence 3 35556666665 2 33431 1112244555666666654 343211 223333 556666666
Q ss_pred cCCCCCCCCCcch-hcCcCcceeecccccccccCCc-cccCCCCCCEEECCCCcCCCcCCccc-ccCCCCCeEeCCCCc
Q 002376 489 SDNSLSGNLPNSL-KNCKSLEELLMAYNQFSGPIPN-IVAELKGLEVLDLSSNKLSGSIPSDL-QNLQALRSLNLTFNN 564 (929)
Q Consensus 489 s~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~ 564 (929)
++|.+++..+..+ ..+++|++|+|++|.+++.... .+..+++|+.|++++|+++......+ ..+++|+...+..+.
T Consensus 464 ~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 464 AFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp ESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred cCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 6666654433333 4566666666666666543332 33346666666666666643222222 344555544444443
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=3.3e-26 Score=245.93 Aligned_cols=228 Identities=23% Similarity=0.243 Sum_probs=189.8
Q ss_pred EEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCC
Q 002376 332 YLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGN 411 (929)
Q Consensus 332 ~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 411 (929)
..+.++..++ .+|..+. .+|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 11 ~~~c~~~~l~-~ip~~l~---~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 86 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP---FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86 (276)
T ss_dssp EEECTTSCCS-SCCSSSC---TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred eEEecCCCcc-ccCCCCC---CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCC
Confidence 3455555565 5666543 37899999999998888888999999999999999998777778889999999999999
Q ss_pred cCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCC
Q 002376 412 EIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDN 491 (929)
Q Consensus 412 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N 491 (929)
++++..+..|.++++|++|++++|++++..+..|.++++|++|++++|++++. .+|..+..+++|++|+|++|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-------~l~~~~~~l~~L~~L~Ls~N 159 (276)
T 2z62_A 87 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF-------KLPEYFSNLTNLEHLDLSSN 159 (276)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC-------CCCGGGGGCTTCCEEECCSS
T ss_pred ccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCcccee-------cCchhhccCCCCCEEECCCC
Confidence 99888888899999999999999999887777888999999999999998742 13778888899999999999
Q ss_pred CCCCCCCcchhcCcCcc----eeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcc
Q 002376 492 SLSGNLPNSLKNCKSLE----ELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEG 567 (929)
Q Consensus 492 ~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 567 (929)
++++..+..+..+.+|+ .|++++|++++..+..+.. .+|+.|+|++|++++..+..+..+++|+.|++++|++++
T Consensus 160 ~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 160 KIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred CCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 99988888888888777 8899999999777666654 489999999999997777778889999999999999987
Q ss_pred cCCC
Q 002376 568 VVPS 571 (929)
Q Consensus 568 ~~p~ 571 (929)
..|.
T Consensus 239 ~c~~ 242 (276)
T 2z62_A 239 SCPR 242 (276)
T ss_dssp CTTT
T ss_pred cCCc
Confidence 6553
No 323
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.93 E-value=7e-28 Score=262.23 Aligned_cols=214 Identities=19% Similarity=0.196 Sum_probs=148.3
Q ss_pred hCCCCCc-eeecccCceeEEeccccC-----------cHHHHHHHHHHH-HccCCccccceeeecccCCCCCcceEEEEE
Q 002376 660 TGNFSHE-NLIGSGSFGSVLHNERTG-----------SWKSFIAECETL-RNVRHRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 660 ~~~~~~~-~~iG~G~~g~Vy~~~~~~-----------~~~~~~~E~~~l-~~l~Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
.++|... +.||+|+||.||++.... ....+.+|+.++ +..+||||+++++++.... ......++||
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~~~lv~ 94 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLY-AGRKCLLIVM 94 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEEEEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecccHHHHHHHHHHHHhccCCCchhHHhhhhhhc-CCCceEEEEE
Confidence 3466666 789999999999997642 245788999988 5669999999999985421 1245689999
Q ss_pred EecCCCCccccccccc----------cccccHHHHHHHhhhCCCCCEEecCCCCCCeeecC---CCceEEeccccccccc
Q 002376 727 EFLSNGSLGDWIHGER----------KNELDITSALDYLHNDCEVPVVHSDLKPGNILLDE---EMTAKVGDFGLARFLL 793 (929)
Q Consensus 727 e~~~~gsL~~~l~~~~----------~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~---~~~~ki~DfGla~~~~ 793 (929)
||+++|+|.+++.... .++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++...
T Consensus 95 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 171 (299)
T 3m2w_A 95 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171 (299)
T ss_dssp CCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT
T ss_pred eecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccccccc
Confidence 9999999999986432 2367899999999998 9999999999999998 7899999999987431
Q ss_pred cccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCCCcchhHHhhhcCCc-hhhhccChHHHHhhcccch
Q 002376 794 ERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAGEFNIVKWVESNLPE-NVLQVLDPELRQLMTSNES 872 (929)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ 872 (929)
+..++.++||||+|++++++.....++..... ............ ....
T Consensus 172 ----------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~---~~~~ 220 (299)
T 3m2w_A 172 ----------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM---GQYE 220 (299)
T ss_dssp ----------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCT---TCCS
T ss_pred ----------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhh---cccc
Confidence 23467789999999877776554443322111 000000000000 0000
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 002376 873 QTIQLHDCLITIIGSVGLSCTTESPGGRIGIREALR 908 (929)
Q Consensus 873 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 908 (929)
........+..-+.+++.+||+.||++|||++|+++
T Consensus 221 ~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 221 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp SCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 000000111222334777999999999999999986
No 324
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=9.2e-29 Score=296.25 Aligned_cols=422 Identities=16% Similarity=0.146 Sum_probs=257.6
Q ss_pred CEEEeecCCCCCCCC-cCCCCCCCCcEEeCCCCCCCC---Cccc------------ccccccccceecccccccCCCCCh
Q 002376 98 RSIQLQNNKLSGNLP-REIGNLFRLRVLNISFNNLQG---ELPV------------NISKLTELKMLDLMANKITGRVTD 161 (929)
Q Consensus 98 ~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~---~~p~------------~~~~l~~L~~L~Ls~N~l~~~i~~ 161 (929)
+.+++++... ..| ..+..+++|++|+|+++.... ..|. .+..+++|++|+|++|.+++..+.
T Consensus 46 ~~l~~~~~~~--~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~ 123 (594)
T 2p1m_B 46 RKVFIGNCYA--VSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLE 123 (594)
T ss_dssp CEEEESSTTS--SCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHH
T ss_pred eEEeeccccc--cCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHH
Confidence 4566654332 222 235567788899988875321 1121 123566777777777776643333
Q ss_pred hhhc-cCCCCcEEEcccc-ccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccc----cCCCCceEEeeecC
Q 002376 162 DQLR-NLRSLQVLNFGKN-LLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIY----NMTSLVHLRLASNQ 235 (929)
Q Consensus 162 ~~~~-~l~~L~~L~Ls~N-~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l~~L~~L~Ls~N~ 235 (929)
. +. .+++|++|+|++| .++.. .++..+..+++|++|+|++|.+++..+..+. .+++|++|+|++|.
T Consensus 124 ~-l~~~~~~L~~L~L~~~~~~~~~-------~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~ 195 (594)
T 2p1m_B 124 L-IAKSFKNFKVLVLSSCEGFSTD-------GLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA 195 (594)
T ss_dssp H-HHHHCTTCCEEEEESCEEEEHH-------HHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC
T ss_pred H-HHHhCCCCcEEeCCCcCCCCHH-------HHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC
Confidence 3 33 5677777777766 32110 0112233566777777777766654443333 44566666666664
Q ss_pred CCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCc-cCcCCccCCCCCCCccceeccccc-------
Q 002376 236 LGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHN-LLEGTLPPGLGNLPFLRTYNIGFN------- 307 (929)
Q Consensus 236 l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N------- 307 (929)
+.++... ++..+.++++|+.|++++| .+++ +|..+..+++|+.|+++.+
T Consensus 196 --~~~~~~~--------------------l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~ 252 (594)
T 2p1m_B 196 --SEVSFSA--------------------LERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPD 252 (594)
T ss_dssp --SCCCHHH--------------------HHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHH
T ss_pred --CcCCHHH--------------------HHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchh
Confidence 1121111 1111223455555555555 2332 4445555556666654333
Q ss_pred cccCCCCCCCCccccccCCCCCCCEE-EccCCccccccCchhhhccccccEEEecCCcccccc-CCCCCCCCcccEEEee
Q 002376 308 KIVSSGDDEGLSFITSLTNSTHLNYL-ALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKI-PASIGRLRSLTLLDLS 385 (929)
Q Consensus 308 ~i~~~~~~~~~~~~~~~~~l~~L~~L-~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls 385 (929)
.+... ...+.++++|+.| .+.+... +.+|..+..++ +|++|+|++|.+++.. +..+..+++|++|+++
T Consensus 253 ~~~~l--------~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~-~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~ 322 (594)
T 2p1m_B 253 VYSGL--------SVALSGCKELRCLSGFWDAVP-AYLPAVYSVCS-RLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVL 322 (594)
T ss_dssp HHHHH--------HHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHT-TCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEE
T ss_pred hHHHH--------HHHHhcCCCcccccCCcccch-hhHHHHHHhhC-CCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCc
Confidence 22221 2356788899998 4554433 34555555555 7999999999977543 2335688999999999
Q ss_pred CCCCCcc-cCccccCCCCCCEEEecC---------CcCCCCCccccc-CCCCCceecccCcccccccCcccc-cccccce
Q 002376 386 YNSISGE-IPIEIGQLQGLQVLGLAG---------NEIPGGIPNSLA-NLKKLNQIDLSGNELTGEIPISFG-NFQSLLS 453 (929)
Q Consensus 386 ~N~l~~~-~p~~~~~l~~L~~L~L~~---------N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~ 453 (929)
+| +.+. ++.....+++|++|++++ |.+++.....+. ++++|+.|+++.|.+++..+..+. .+++|+.
T Consensus 323 ~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~ 401 (594)
T 2p1m_B 323 DY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTR 401 (594)
T ss_dssp GG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCE
T ss_pred Cc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcce
Confidence 88 4432 233334589999999943 555543333333 478999999999999876665554 5889999
Q ss_pred eccc--C----CcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhc-CcCcceeecccccccccCCccc-
Q 002376 454 IDLS--N----NRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKN-CKSLEELLMAYNQFSGPIPNIV- 525 (929)
Q Consensus 454 L~Ls--~----N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~- 525 (929)
|+++ + |.+++. |.. ..++..+..+++|+.|+|++ .+++..+..++. +++|+.|+|++|.+++..+..+
T Consensus 402 L~L~~~~~~~~~~l~~~-~~~--~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~ 477 (594)
T 2p1m_B 402 FRLCIIEPKAPDYLTLE-PLD--IGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVL 477 (594)
T ss_dssp EEEEESSTTCCCTTTCC-CTH--HHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHH
T ss_pred eEeecccCCCcccccCC-chh--hHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHH
Confidence 9998 4 555421 100 01133366788999999977 666655555655 8889999999999876655554
Q ss_pred cCCCCCCEEECCCCcCCCcCCc-ccccCCCCCeEeCCCCcCcc
Q 002376 526 AELKGLEVLDLSSNKLSGSIPS-DLQNLQALRSLNLTFNNLEG 567 (929)
Q Consensus 526 ~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~ 567 (929)
..+++|++|+|++|.+++..+. ....+++|+.|++++|+++.
T Consensus 478 ~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 478 SGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp HHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred hcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 6688999999999998654433 44568899999999998743
No 325
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2.1e-24 Score=230.98 Aligned_cols=202 Identities=23% Similarity=0.276 Sum_probs=105.9
Q ss_pred CCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEe
Q 002376 329 HLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGL 408 (929)
Q Consensus 329 ~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 408 (929)
..+.+++++|+++ .+|..+. .+++.|+|++|++++..+..|.++++|++|+|++|+++...+..|..+++|++|++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP---ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC---TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEEC
T ss_pred CCCEEEccCCCCC-ccCCCCC---CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEEC
Confidence 3556666666666 3554332 24666666666666555555666666666666666655444444455555555555
Q ss_pred cCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEe
Q 002376 409 AGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDL 488 (929)
Q Consensus 409 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdL 488 (929)
++|++++..+..|.++++|++|+|++|++++..+..|.++++|++ |+|
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~--------------------------------L~L 140 (270)
T 2o6q_A 93 TDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTY--------------------------------LSL 140 (270)
T ss_dssp CSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCE--------------------------------EEC
T ss_pred CCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCE--------------------------------EEC
Confidence 555555444444455555555555555554444444444444444 444
Q ss_pred cCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCc
Q 002376 489 SDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLE 566 (929)
Q Consensus 489 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 566 (929)
++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|++.
T Consensus 141 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 444444333344455555555555555555544445555555555555555555444444555555555555544443
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=1e-24 Score=234.32 Aligned_cols=209 Identities=25% Similarity=0.248 Sum_probs=165.5
Q ss_pred CCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEE
Q 002376 328 THLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLG 407 (929)
Q Consensus 328 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 407 (929)
++|++|+|++|++++..+..+..+. +|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFP-ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCT-TCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCccEEECCCCcccccCHhHhcccc-CCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 3577777777777765555666666 688888888888877777788888888888888888877777788888888888
Q ss_pred ecCCcCCCCCcccccCCCCCceecccCcccccc-cCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCcc--
Q 002376 408 LAGNEIPGGIPNSLANLKKLNQIDLSGNELTGE-IPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVV-- 484 (929)
Q Consensus 408 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~-- 484 (929)
+++|++++..+..+..+++|++|++++|++++. +|..|.++++|++|+|++|++++.. +..+..+.+|+
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~--------~~~~~~l~~L~~l 178 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY--------CTDLRVLHQMPLL 178 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEEC--------GGGGHHHHTCTTC
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCC--------HHHhhhhhhcccc
Confidence 888888877776788888888888888888763 5778888888888888888887532 44555555665
Q ss_pred --EEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCC
Q 002376 485 --TIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIP 546 (929)
Q Consensus 485 --~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 546 (929)
.|++++|++++..+..+.. .+|++|+|++|++++.++..|..+++|+.|+|++|++++..|
T Consensus 179 ~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 179 NLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 8999999998766655544 489999999999998888888999999999999999997654
No 327
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.92 E-value=2.4e-26 Score=270.60 Aligned_cols=142 Identities=18% Similarity=0.084 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHcc-CCccccceeeecccCCCCCcceEEEEEEecCCCCccccccccc-----cccccHHHHHHHhhhCC
Q 002376 686 WKSFIAECETLRNV-RHRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHGER-----KNELDITSALDYLHNDC 759 (929)
Q Consensus 686 ~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-----~~~~~ia~aL~yLH~~~ 759 (929)
.++|.+|+++|+++ +|+||+++++++.+ ....||||||++||+|.+++.... .+..||+.||+|+|++
T Consensus 285 ~~~~~~E~~~l~~~~~~~~i~~~~~~~ed-----~~~~yLVMEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~- 358 (569)
T 4azs_A 285 KYELHNEIKFLTQPPAGFDAPAVLAHGEN-----AQSGWLVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQ- 358 (569)
T ss_dssp HHHHHHHHHHHHSCCTTCCCCCEEEEEEC-----SSEEEEEEECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHhcCCCCCeeEEEEEEEE-----CCEEEEEEecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHC-
Confidence 46799999999999 79999999999843 445899999999999999997433 3578999999999998
Q ss_pred CCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCCccccceeccccccccccccCCCCCCCCCCCCCCcCCCC
Q 002376 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLGERPSTAGDVPTSESFAG 839 (929)
Q Consensus 760 ~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~s~g~~~~ 839 (929)
+||||||||+|||++++|.+||+|||+|+..... .......+||++|||||++.+ .+..++|+|+.|+..+
T Consensus 359 --GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~------~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~ 429 (569)
T 4azs_A 359 --GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD------CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPF 429 (569)
T ss_dssp --TCEESCCCGGGEEECTTSCEEECCCTTEESCC---------CCSHHHHHHHHHHHHHHC------------------C
T ss_pred --CceeccCchHhEEECCCCCEEEeecccCeeCCCC------CccccCceechhhccHHHhCC-CCCCcccccccccchh
Confidence 9999999999999999999999999999865321 122345689999999999875 5678899999998877
Q ss_pred Ccc
Q 002376 840 EFN 842 (929)
Q Consensus 840 ~~~ 842 (929)
++.
T Consensus 430 ~l~ 432 (569)
T 4azs_A 430 NLP 432 (569)
T ss_dssp CCC
T ss_pred hhc
Confidence 753
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.8e-24 Score=233.68 Aligned_cols=205 Identities=24% Similarity=0.283 Sum_probs=141.2
Q ss_pred CCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccc
Q 002376 373 IGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLL 452 (929)
Q Consensus 373 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 452 (929)
++++++++++++++|.++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|.+++..+. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 344556666666666665 3444332 4566666666666666666666666677777777766654332 5667777
Q ss_pred eecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCC
Q 002376 453 SIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLE 532 (929)
Q Consensus 453 ~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 532 (929)
+|+|++|+|+ .+ |..+..+++|++|+|++|++++..|..|.++++|++|+|++|+|++.++..|..+++|+
T Consensus 81 ~L~Ls~N~l~-~l--------~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 151 (290)
T 1p9a_G 81 TLDLSHNQLQ-SL--------PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151 (290)
T ss_dssp EEECCSSCCS-SC--------CCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred EEECCCCcCC-cC--------chhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCC
Confidence 7777777765 22 44556667777777777777776667777888888888888888877777777788888
Q ss_pred EEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCCCCCCCCCCCcccccCCCCCcC
Q 002376 533 VLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVHLKGNPKLCL 591 (929)
Q Consensus 533 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~N~~~c~ 591 (929)
.|+|++|+|++..+..|..+++|+.|+|++|+++..++.......++.+++.+||+.|.
T Consensus 152 ~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 152 KLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp EEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred EEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCc
Confidence 88888888886656667778888888888888875544444456677888888888883
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=4e-25 Score=236.75 Aligned_cols=186 Identities=23% Similarity=0.291 Sum_probs=87.1
Q ss_pred CCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCC
Q 002376 325 TNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQ 404 (929)
Q Consensus 325 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 404 (929)
..+++|++|+|++|++++ + ..+..+. +|++|+|++|.+++..+..|+++++|++|+|++|++++..+..|..+++|+
T Consensus 60 ~~l~~L~~L~l~~n~l~~-~-~~l~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 136 (272)
T 3rfs_A 60 QYLPNVRYLALGGNKLHD-I-SALKELT-NLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLT 136 (272)
T ss_dssp GGCTTCCEEECTTSCCCC-C-GGGTTCT-TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred ccCCCCcEEECCCCCCCC-c-hhhcCCC-CCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCC
Confidence 334444444555444442 1 2333333 344444444444444444444444444444444444444444444444444
Q ss_pred EEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCcc
Q 002376 405 VLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVV 484 (929)
Q Consensus 405 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~ 484 (929)
+|++++|++++..+..|..+++|++|++++|++++..+..|.++ ++|+
T Consensus 137 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l--------------------------------~~L~ 184 (272)
T 3rfs_A 137 YLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKL--------------------------------TQLK 184 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC--------------------------------TTCC
T ss_pred EEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCC--------------------------------ccCC
Confidence 44444444444444444444444444444444444333334444 4444
Q ss_pred EEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccC
Q 002376 485 TIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNL 552 (929)
Q Consensus 485 ~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 552 (929)
.|+|++|++++..|..+..+++|+.|+|++|.+.+. +++|+.|+++.|+++|.+|.+++.+
T Consensus 185 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 185 DLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred EEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccccc
Confidence 444444444444444445555555555555544432 2345555555555555555555443
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=3.3e-25 Score=237.44 Aligned_cols=200 Identities=21% Similarity=0.268 Sum_probs=167.9
Q ss_pred cccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceeccc
Q 002376 354 ELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLS 433 (929)
Q Consensus 354 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 433 (929)
+|+.|++++|.++.. ..+..+++|++|+|++|.+++. ..+..+++|++|++++|.+++..+..|.++++|++|+|+
T Consensus 42 ~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 117 (272)
T 3rfs_A 42 SIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLV 117 (272)
T ss_dssp TCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred ceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECC
Confidence 577777777776632 3467778888888888888753 367788888888888888888777778888888888888
Q ss_pred CcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecc
Q 002376 434 GNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMA 513 (929)
Q Consensus 434 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls 513 (929)
+|++++..+..|.++++|++|++++|++++.. |..+..+++|+.|+|++|++++..|..|+.+++|+.|+|+
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 189 (272)
T 3rfs_A 118 ENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLP--------KGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLY 189 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC--------TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcCCccCHHHhccCCCCCEEECCCCccCccC--------HHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECC
Confidence 88888777777888889999999999887432 3456778899999999999998888889999999999999
Q ss_pred cccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCCCC
Q 002376 514 YNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSE 572 (929)
Q Consensus 514 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 572 (929)
+|++++.+|..+..+++|+.|+|++|.+.+.. +.|+.++++.|.++|.+|..
T Consensus 190 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~-------~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 190 QNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC-------PGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT-------TTTHHHHHHHHHTGGGBBCT
T ss_pred CCcCCccCHHHHhCCcCCCEEEccCCCccccC-------cHHHHHHHHHHhCCCcccCc
Confidence 99999999989999999999999999998654 46899999999999999975
No 331
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=3.3e-24 Score=234.36 Aligned_cols=228 Identities=24% Similarity=0.298 Sum_probs=186.2
Q ss_pred CCCCEEEccCCccccccCch---hhhccccccEEEecCCccccccCCCC--CCCCcccEEEeeCCCCCcccC----cccc
Q 002376 328 THLNYLALDGNQFEGKIPES---IGNFSNELSKLYLGGNHIYGKIPASI--GRLRSLTLLDLSYNSISGEIP----IEIG 398 (929)
Q Consensus 328 ~~L~~L~Ls~N~l~~~~p~~---~~~~~~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~ 398 (929)
..++.|.+.++.++...-.. +.... +|++|+|++|++++..|..+ ..+++|++|+|++|.+++..+ ..+.
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYS-RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHS-CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccC-ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 45778888888775321111 11233 69999999999999999998 999999999999999997655 4456
Q ss_pred CCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccc---c-CcccccccccceecccCCcCCCCCCCCcccCCc
Q 002376 399 QLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGE---I-PISFGNFQSLLSIDLSNNRINGNIPKGILRPLP 474 (929)
Q Consensus 399 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~-p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p 474 (929)
.+++|++|+|++|++++..|..|..+++|++|||++|++.+. . +..+..+++|++|+|++|+++. ++ ..+
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~-----~~~ 216 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PT-----GVC 216 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HH-----HHH
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hH-----HHH
Confidence 799999999999999999999999999999999999998753 2 3345789999999999999963 21 012
Q ss_pred h-hhhcccCccEEEecCCCCCCCCCcchhcC---cCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccc
Q 002376 475 E-EISRLENVVTIDLSDNSLSGNLPNSLKNC---KSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQ 550 (929)
Q Consensus 475 ~-~~~~l~~L~~LdLs~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 550 (929)
. .+..+++|++|||++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|++|||++|+|++. |. +.
T Consensus 217 ~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~ 291 (310)
T 4glp_A 217 AALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PD 291 (310)
T ss_dssp HHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TT
T ss_pred HHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hh
Confidence 2 25788999999999999999888888877 69999999999999 5676664 7999999999999964 43 67
Q ss_pred cCCCCCeEeCCCCcCcc
Q 002376 551 NLQALRSLNLTFNNLEG 567 (929)
Q Consensus 551 ~l~~L~~L~Ls~N~l~~ 567 (929)
.+++|+.|+|++|+++.
T Consensus 292 ~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 292 ELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp SCCCCSCEECSSTTTSC
T ss_pred hCCCccEEECcCCCCCC
Confidence 88999999999999874
No 332
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=3.7e-24 Score=224.65 Aligned_cols=186 Identities=15% Similarity=0.193 Sum_probs=153.1
Q ss_pred ccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCC-CCCCcccccccccccceecccc-cccCCCCChhh
Q 002376 86 TISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNN-LQGELPVNISKLTELKMLDLMA-NKITGRVTDDQ 163 (929)
Q Consensus 86 ~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~i~~~~ 163 (929)
.+|. +. ++|++|+|++|++++..+..|+++++|++|+|++|+ +++..+..|.++++|++|+|++ |+++ .+++..
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~-~i~~~~ 100 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLT-YIDPDA 100 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCC-EECTTS
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCee-EcCHHH
Confidence 5666 43 389999999999998888899999999999999997 8877777899999999999999 9998 677777
Q ss_pred hccCCCCcEEEccccccCCCCCccccccCCCccCCCCccc---EEEeecc-cCCCccCCccccCCCCc-eEEeeecCCCC
Q 002376 164 LRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLK---VLDLTIN-RLAGTVPSTIYNMTSLV-HLRLASNQLGG 238 (929)
Q Consensus 164 ~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~ 238 (929)
|.++++|++|++++|++++ +| . |..+++|+ +|++++| +++++.+..|.++++|+ +|+|++|+++
T Consensus 101 f~~l~~L~~L~l~~n~l~~-lp--------~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~- 169 (239)
T 2xwt_C 101 LKELPLLKFLGIFNTGLKM-FP--------D-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT- 169 (239)
T ss_dssp EECCTTCCEEEEEEECCCS-CC--------C-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-
T ss_pred hCCCCCCCEEeCCCCCCcc-cc--------c-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-
Confidence 9999999999999999865 33 2 55667777 9999999 99988888899999999 9999999998
Q ss_pred cCCcccccCCCCcceeeccCCc-CCCCCCCccccc-ccccEEeccCccCcC
Q 002376 239 EIPYDVRDTLPNLLDFIYCFNR-FTGKIPGSLHNL-TNIQIIRMTHNLLEG 287 (929)
Q Consensus 239 ~ip~~~~~~l~~L~~l~l~~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~ 287 (929)
.+|...+.. ++|+.|++++|+ +++..+..|.++ ++|+.|++++|+|++
T Consensus 170 ~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~ 219 (239)
T 2xwt_C 170 SVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA 219 (239)
T ss_dssp EECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC
T ss_pred ccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc
Confidence 777776664 667777777773 666556666666 667777777666664
No 333
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=1e-23 Score=227.73 Aligned_cols=205 Identities=22% Similarity=0.228 Sum_probs=128.7
Q ss_pred ccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCC
Q 002376 323 SLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQG 402 (929)
Q Consensus 323 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 402 (929)
.+.++++++++++++|.++ .+|..+. ..++.|+|++|+|++..+..|.++++|++|+|++|.|++..+. +.+++
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~---~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~ 78 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPV 78 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTT
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC---CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCc
Confidence 3566788888888888887 5666553 3688888888888877777888888888888888888754332 56777
Q ss_pred CCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccC
Q 002376 403 LQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLEN 482 (929)
Q Consensus 403 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~ 482 (929)
|++|+|++|+|+ .+|..+..+++|++|+|++|++++..|..|.++++|+.|+|++|+|+
T Consensus 79 L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-------------------- 137 (290)
T 1p9a_G 79 LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK-------------------- 137 (290)
T ss_dssp CCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC--------------------
T ss_pred CCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCC--------------------
Confidence 777777777776 45566666666777777776666555556666666666666666655
Q ss_pred ccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCC
Q 002376 483 VVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTF 562 (929)
Q Consensus 483 L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 562 (929)
+..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.++|++
T Consensus 138 ------------~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~ 204 (290)
T 1p9a_G 138 ------------TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHG 204 (290)
T ss_dssp ------------CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCS
T ss_pred ------------ccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCC
Confidence 333333444444444555555554444444444555555555555554 3444444445555555555
Q ss_pred CcCcc
Q 002376 563 NNLEG 567 (929)
Q Consensus 563 N~l~~ 567 (929)
|++.+
T Consensus 205 Np~~C 209 (290)
T 1p9a_G 205 NPWLC 209 (290)
T ss_dssp CCBCC
T ss_pred CCccC
Confidence 55543
No 334
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=9.5e-24 Score=223.24 Aligned_cols=191 Identities=27% Similarity=0.311 Sum_probs=150.3
Q ss_pred CCCCCcceeeCCCCCcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcc
Q 002376 57 SPCTWPGVICNNFGNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELP 136 (929)
Q Consensus 57 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 136 (929)
+||.|.|.+|... ...+++++++++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|+|++..|
T Consensus 3 ~Cp~~~gC~C~~~---~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNEG---KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEGG---GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCCC---CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 5889999999642 336889999988 6787776 689999999999998888899999999999999999999888
Q ss_pred cccccccccceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCcc
Q 002376 137 VNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTV 216 (929)
Q Consensus 137 ~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~ 216 (929)
..|.++++|++|+|++|+|+ .+++..|.++++|++|+|++|++++ +.+..|..+++|++|+|++|+|+++.
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~--------~~~~~~~~l~~L~~L~Ls~N~l~~~~ 147 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKS--------LPSGVFDRLTKLKELRLNTNQLQSIP 147 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCC--------CCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred hHhccCCcCCEEECCCCccc-ccChhHhcccCCCCEEEcCCCcCCC--------cChhHhccCCcccEEECcCCcCCccC
Confidence 88999999999999999998 5677778889999999999998753 23345677888888888888888777
Q ss_pred CCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCC
Q 002376 217 PSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTG 263 (929)
Q Consensus 217 p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~ 263 (929)
+..|.++++|++|+|++|+|+ .+|...+..+++|+.+++++|.+++
T Consensus 148 ~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 148 AGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp TTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred HHHcCcCcCCCEEECCCCcCC-ccCHHHHhCCCCCCEEEeeCCceeC
Confidence 778888888888888888877 3333333334444444444444443
No 335
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=3.2e-23 Score=217.53 Aligned_cols=196 Identities=16% Similarity=0.227 Sum_probs=118.7
Q ss_pred cccEEEecCCccccccCCCCCCCCcccEEEeeCCC-CCcccCccccCCCCCCEEEecC-CcCCCCCcccccCCCCCceec
Q 002376 354 ELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNS-ISGEIPIEIGQLQGLQVLGLAG-NEIPGGIPNSLANLKKLNQID 431 (929)
Q Consensus 354 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ 431 (929)
+|++|++++|+|++..+..|.++++|++|+|++|+ +++..+..|.++++|++|++++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 67777777777777666677777777777777775 6655555677777777777776 777766666677777777777
Q ss_pred ccCcccccccCcccccccccc---eecccCC-cCCCCCCCCcccCCchhhhcccCcc-EEEecCCCCCCCCCcchhcCcC
Q 002376 432 LSGNELTGEIPISFGNFQSLL---SIDLSNN-RINGNIPKGILRPLPEEISRLENVV-TIDLSDNSLSGNLPNSLKNCKS 506 (929)
Q Consensus 432 Ls~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~g~i~~~~~~~~p~~~~~l~~L~-~LdLs~N~l~~~~p~~~~~l~~ 506 (929)
+++|++++ +|. |..+++|+ +|++++| ++++ +| +..+..+++|+ .|++++|+++...+..|.. ++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~-i~-------~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~ 180 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTS-IP-------VNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TK 180 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCE-EC-------TTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CE
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhh-cC-------cccccchhcceeEEEcCCCCCcccCHhhcCC-CC
Confidence 77777765 444 55565555 6666666 5542 21 22344555555 6666666555222222333 55
Q ss_pred cceeeccccc-ccccCCccccCC-CCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCC
Q 002376 507 LEELLMAYNQ-FSGPIPNIVAEL-KGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFN 563 (929)
Q Consensus 507 L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 563 (929)
|+.|+|++|+ +++..+..|..+ ++|+.|||++|++++ +|.. .+++|+.|+++++
T Consensus 181 L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 181 LDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp EEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred CCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 6666666663 555555555555 566666666666653 2322 3445555555543
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=7.2e-25 Score=245.14 Aligned_cols=234 Identities=22% Similarity=0.292 Sum_probs=132.0
Q ss_pred EEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCC-CCCEEEccCCccccccCchhhhc----
Q 002376 277 IIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNST-HLNYLALDGNQFEGKIPESIGNF---- 351 (929)
Q Consensus 277 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~~---- 351 (929)
.+++++|.+++.+|..+...++|++|++++|.+...+.. .....+..++ +|++|+|++|++++..+..+...
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~---~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~ 78 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTV---ELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAI 78 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHH---HHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTS
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHH---HHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhcc
Confidence 467888899988887777777788888888887654321 1113455666 77778888887776666666554
Q ss_pred cccccEEEecCCccccccCCCCC----CC-CcccEEEeeCCCCCcccCccccC-----CCCCCEEEecCCcCCCCCc---
Q 002376 352 SNELSKLYLGGNHIYGKIPASIG----RL-RSLTLLDLSYNSISGEIPIEIGQ-----LQGLQVLGLAGNEIPGGIP--- 418 (929)
Q Consensus 352 ~~~L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~p--- 418 (929)
..+|++|+|++|.+++..+..+. .+ ++|++|+|++|++++..+..+.. .++|++|+|++|++++..+
T Consensus 79 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l 158 (362)
T 3goz_A 79 PANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDEL 158 (362)
T ss_dssp CTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHH
T ss_pred CCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHH
Confidence 12577777777777655544332 22 66777777777766554433322 2466666666666664332
Q ss_pred -ccccCCC-CCceecccCcccccccCccccc----c-cccceecccCCcCCCCCCCCcccCCchhhhcc-cCccEEEecC
Q 002376 419 -NSLANLK-KLNQIDLSGNELTGEIPISFGN----F-QSLLSIDLSNNRINGNIPKGILRPLPEEISRL-ENVVTIDLSD 490 (929)
Q Consensus 419 -~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~----l-~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l-~~L~~LdLs~ 490 (929)
..+..++ +|++|+|++|++++..+..+.. + ++|+.|+|++|+|++.- ...++..+..+ ++|++|||++
T Consensus 159 ~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~----~~~l~~~l~~~~~~L~~L~Ls~ 234 (362)
T 3goz_A 159 IQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKS----YAELAYIFSSIPNHVVSLNLCL 234 (362)
T ss_dssp HHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSC----HHHHHHHHHHSCTTCCEEECCS
T ss_pred HHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhH----HHHHHHHHhcCCCCceEEECcC
Confidence 2233343 6666666666665544433322 2 35666666666654311 01123334332 3555666666
Q ss_pred CCCCCCCCc----chhcCcCcceeecccccc
Q 002376 491 NSLSGNLPN----SLKNCKSLEELLMAYNQF 517 (929)
Q Consensus 491 N~l~~~~p~----~~~~l~~L~~L~Ls~N~l 517 (929)
|.+++..+. .+..+++|+.|+|++|.+
T Consensus 235 N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l 265 (362)
T 3goz_A 235 NCLHGPSLENLKLLKDSLKHLQTVYLDYDIV 265 (362)
T ss_dssp SCCCCCCHHHHHHTTTTTTTCSEEEEEHHHH
T ss_pred CCCCcHHHHHHHHHHhcCCCccEEEeccCCc
Confidence 655544332 223344555555555553
No 337
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=2.3e-25 Score=249.19 Aligned_cols=37 Identities=32% Similarity=0.489 Sum_probs=17.1
Q ss_pred cccEEEeecccCCCccC----CccccCC-CCceEEeeecCCC
Q 002376 201 NLKVLDLTINRLAGTVP----STIYNMT-SLVHLRLASNQLG 237 (929)
Q Consensus 201 ~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~ 237 (929)
+|++|||++|+|++..+ ..|.+++ +|++|+|++|+|+
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 64 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLG 64 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGG
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCC
Confidence 35555555555444433 3344444 4444444444444
No 338
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=4.2e-25 Score=249.51 Aligned_cols=240 Identities=22% Similarity=0.275 Sum_probs=122.9
Q ss_pred cCCCCCCCEEEccCCccccccCch----hhhccccccEEEecCC---ccccccCCCC-------CCCCcccEEEeeCCCC
Q 002376 324 LTNSTHLNYLALDGNQFEGKIPES----IGNFSNELSKLYLGGN---HIYGKIPASI-------GRLRSLTLLDLSYNSI 389 (929)
Q Consensus 324 ~~~l~~L~~L~Ls~N~l~~~~p~~----~~~~~~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~Ls~N~l 389 (929)
+..+++|++|+|++|++++..+.. +..++ +|++|+|++| ++++.+|..+ ..+++|++|+|++|.+
T Consensus 28 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~-~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l 106 (386)
T 2ca6_A 28 LLEDDSVKEIVLSGNTIGTEAARWLSENIASKK-DLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAF 106 (386)
T ss_dssp HHHCSCCCEEECTTSEECHHHHHHHHHTTTTCT-TCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCC
T ss_pred HhcCCCccEEECCCCCCCHHHHHHHHHHHHhCC-CccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcC
Confidence 334445555555555554432222 22232 4555555443 2223333222 4556666666666666
Q ss_pred Cc----ccCccccCCCCCCEEEecCCcCCCCCccccc----CC---------CCCceecccCcccc-cccC---cccccc
Q 002376 390 SG----EIPIEIGQLQGLQVLGLAGNEIPGGIPNSLA----NL---------KKLNQIDLSGNELT-GEIP---ISFGNF 448 (929)
Q Consensus 390 ~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l---------~~L~~L~Ls~N~l~-~~~p---~~~~~l 448 (929)
++ .+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++ +.+| ..|..+
T Consensus 107 ~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~ 186 (386)
T 2ca6_A 107 GPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSH 186 (386)
T ss_dssp CTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhC
Confidence 54 3455555566666666666665433222222 22 56666666666664 2233 244455
Q ss_pred cccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCC----CCCCcchhcCcCcceeeccccccccc----
Q 002376 449 QSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLS----GNLPNSLKNCKSLEELLMAYNQFSGP---- 520 (929)
Q Consensus 449 ~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~---- 520 (929)
++|++|+|++|+|+.. ++....|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+|++|+|++.
T Consensus 187 ~~L~~L~L~~n~l~~~---g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~ 263 (386)
T 2ca6_A 187 RLLHTVKMVQNGIRPE---GIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 263 (386)
T ss_dssp TTCCEEECCSSCCCHH---HHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred CCcCEEECcCCCCCHh---HHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHH
Confidence 5666666666655410 000001224455556666666666654 34555566666666666666666544
Q ss_pred CCcccc--CCCCCCEEECCCCcCCC----cCCccc-ccCCCCCeEeCCCCcCcc
Q 002376 521 IPNIVA--ELKGLEVLDLSSNKLSG----SIPSDL-QNLQALRSLNLTFNNLEG 567 (929)
Q Consensus 521 ~p~~~~--~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~~ 567 (929)
+|..+. .+++|+.|+|++|++++ .+|..+ .++++|++|++++|++++
T Consensus 264 l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 264 VVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp HHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 344442 26666666666666665 355555 445666666666666654
No 339
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=1.7e-22 Score=213.56 Aligned_cols=179 Identities=19% Similarity=0.249 Sum_probs=100.3
Q ss_pred cccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceeccc
Q 002376 354 ELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLS 433 (929)
Q Consensus 354 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 433 (929)
..++++++++.++ .+|..+. ++|+.|+|++|.+++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4667777777776 3444443 466777777777776666666666666666666666666666666666666666666
Q ss_pred CcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecc
Q 002376 434 GNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMA 513 (929)
Q Consensus 434 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls 513 (929)
+|++++..+..|..+++|++|+|++|+|++. | +..+..+++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 163 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSL-P-------SGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLS 163 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCC-C-------TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCc-C-------hhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECC
Confidence 6666655555555566666666666655421 1 2223344445555555555444444444444444444444
Q ss_pred cccccccCCccccCCCCCCEEECCCCcCCC
Q 002376 514 YNQFSGPIPNIVAELKGLEVLDLSSNKLSG 543 (929)
Q Consensus 514 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 543 (929)
+|+|++.++..|..+++|+.|+|++|++++
T Consensus 164 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 164 TNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred CCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 444444444444444444444444444443
No 340
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=7e-25 Score=242.70 Aligned_cols=271 Identities=16% Similarity=0.199 Sum_probs=182.8
Q ss_pred CCCCCCcceeeCCCCCcEEEEEcCCCCCccccCCCCCCC--CCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCC
Q 002376 56 SSPCTWPGVICNNFGNRVIGLNLSSFGLEGTISPHIGNL--SFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQG 133 (929)
Q Consensus 56 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~L--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 133 (929)
.-|.+|.++.|+.. .+..+|++++.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++
T Consensus 34 ~vc~~W~~~~~~~~--~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~ 107 (336)
T 2ast_B 34 GVCKRWYRLASDES--LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEV 107 (336)
T ss_dssp SSCHHHHHHHTCST--TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECH
T ss_pred HHHHHHHHHhcCch--hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCH
Confidence 45668999998743 4668899988776 3456666 8899999999999877665 5678999999999999886
Q ss_pred C-cccccccccccceecccccccCCCCChhhhccCCCCcEEEcccc-ccCCCCCccccccCCCccCCCCcccEEEeecc-
Q 002376 134 E-LPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKN-LLWGSIPPSIANLIPSDLSRLENLKVLDLTIN- 210 (929)
Q Consensus 134 ~-~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N-~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N- 210 (929)
. +|..+..+++|++|+|++|++++..+. .+..+++|++|+|++| .+++. .++..+..+++|++|+|++|
T Consensus 108 ~~~~~~~~~~~~L~~L~L~~~~l~~~~~~-~l~~~~~L~~L~L~~~~~l~~~-------~l~~~~~~~~~L~~L~l~~~~ 179 (336)
T 2ast_B 108 STLHGILSQCSKLQNLSLEGLRLSDPIVN-TLAKNSNLVRLNLSGCSGFSEF-------ALQTLLSSCSRLDELNLSWCF 179 (336)
T ss_dssp HHHHHHHTTBCCCSEEECTTCBCCHHHHH-HHTTCTTCSEEECTTCBSCCHH-------HHHHHHHHCTTCCEEECCCCT
T ss_pred HHHHHHHhhCCCCCEEeCcCcccCHHHHH-HHhcCCCCCEEECCCCCCCCHH-------HHHHHHhcCCCCCEEcCCCCC
Confidence 6 788888899999999999988754444 4778888888888888 45331 12334556778888888888
Q ss_pred cCCCc-cCCccccCC-CCceEEeeec--CCCCcCCcccccCCCCcceeeccCCcCCCCCCCcccccccccEEeccCcc-C
Q 002376 211 RLAGT-VPSTIYNMT-SLVHLRLASN--QLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNL-L 285 (929)
Q Consensus 211 ~l~~~-~p~~~~~l~-~L~~L~Ls~N--~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l 285 (929)
.+++. ++..+..++ +|++|+|++| .++. +.+|..+.++++|+.|++++|. +
T Consensus 180 ~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~------------------------~~l~~~~~~~~~L~~L~l~~~~~l 235 (336)
T 2ast_B 180 DFTEKHVQVAVAHVSETITQLNLSGYRKNLQK------------------------SDLSTLVRRCPNLVHLDLSDSVML 235 (336)
T ss_dssp TCCHHHHHHHHHHSCTTCCEEECCSCGGGSCH------------------------HHHHHHHHHCTTCSEEECTTCTTC
T ss_pred CcChHHHHHHHHhcccCCCEEEeCCCcccCCH------------------------HHHHHHHhhCCCCCEEeCCCCCcC
Confidence 77754 466677777 7777777777 3431 1233344455556666666655 4
Q ss_pred cCCccCCCCCCCccceecccccc-ccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCc
Q 002376 286 EGTLPPGLGNLPFLRTYNIGFNK-IVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNH 364 (929)
Q Consensus 286 ~~~~p~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~ 364 (929)
++..+..+..+++|++|++++|. +.. . .+..+.++++|++|++++| ++ .+.+..+...+..|++++|+
T Consensus 236 ~~~~~~~l~~l~~L~~L~l~~~~~~~~----~---~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~ 304 (336)
T 2ast_B 236 KNDCFQEFFQLNYLQHLSLSRCYDIIP----E---TLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSH 304 (336)
T ss_dssp CGGGGGGGGGCTTCCEEECTTCTTCCG----G---GGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCC
T ss_pred CHHHHHHHhCCCCCCEeeCCCCCCCCH----H---HHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEeccc
Confidence 44445555555555666555553 110 0 1124566778888888877 33 12344443357777778888
Q ss_pred cccccCCCCCC
Q 002376 365 IYGKIPASIGR 375 (929)
Q Consensus 365 l~~~~p~~~~~ 375 (929)
+++..|..++.
T Consensus 305 l~~~~~~~~~~ 315 (336)
T 2ast_B 305 FTTIARPTIGN 315 (336)
T ss_dssp SCCTTCSSCSS
T ss_pred CccccCCcccc
Confidence 87777776654
No 341
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=1.8e-22 Score=224.55 Aligned_cols=244 Identities=16% Similarity=0.120 Sum_probs=184.3
Q ss_pred CCCCcceeeCCCCCcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcc-
Q 002376 58 PCTWPGVICNNFGNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELP- 136 (929)
Q Consensus 58 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p- 136 (929)
.|+|..|.|+. ++++ .||..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+|
T Consensus 8 ~C~~~~v~C~~------------~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~ 72 (350)
T 4ay9_X 8 HCSNRVFLCQE------------SKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEA 72 (350)
T ss_dssp EEETTEEEEES------------TTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECT
T ss_pred EeeCCEEEecC------------CCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccCh
Confidence 37777777754 3455 677766 3689999999999996666789999999999999999987666
Q ss_pred cccccccccce-ecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeec-ccCCC
Q 002376 137 VNISKLTELKM-LDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTI-NRLAG 214 (929)
Q Consensus 137 ~~~~~l~~L~~-L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~-N~l~~ 214 (929)
..|.++++|++ ++++.|+|+ .++++.|.++++|++|++++|++.+. .+..+....++..|++.+ |++..
T Consensus 73 ~~f~~L~~l~~~l~~~~N~l~-~l~~~~f~~l~~L~~L~l~~n~l~~~--------~~~~~~~~~~l~~l~l~~~~~i~~ 143 (350)
T 4ay9_X 73 DVFSNLPKLHEIRIEKANNLL-YINPEAFQNLPNLQYLLISNTGIKHL--------PDVHKIHSLQKVLLDIQDNINIHT 143 (350)
T ss_dssp TSBCSCTTCCEEEEEEETTCC-EECTTSBCCCTTCCEEEEEEECCSSC--------CCCTTCCBSSCEEEEEESCTTCCE
T ss_pred hHhhcchhhhhhhcccCCccc-ccCchhhhhccccccccccccccccC--------Cchhhcccchhhhhhhcccccccc
Confidence 56889988765 677789998 67777799999999999999988543 233455667788899875 67887
Q ss_pred ccCCccccCC-CCceEEeeecCCCCcCCcccccCCCCcceeeccC-CcCCCCCCCcccccccccEEeccCccCcCCccCC
Q 002376 215 TVPSTIYNMT-SLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCF-NRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPG 292 (929)
Q Consensus 215 ~~p~~~~~l~-~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 292 (929)
+.+..|..+. .++.|+|++|+|+ .+|..++. ..+|+.+++.+ |.++...++.|.++++|++|||++|+|+...+..
T Consensus 144 l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~-~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~ 221 (350)
T 4ay9_X 144 IERNSFVGLSFESVILWLNKNGIQ-EIHNSAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG 221 (350)
T ss_dssp ECTTSSTTSBSSCEEEECCSSCCC-EECTTSST-TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS
T ss_pred ccccchhhcchhhhhhcccccccc-CCChhhcc-ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh
Confidence 7777888775 6889999999998 78877776 56788888875 5555555567888899999999999998666666
Q ss_pred CCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCC
Q 002376 293 LGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGN 338 (929)
Q Consensus 293 ~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N 338 (929)
|.+|++|+.+++. .+..+ ..+.++++|+.++++++
T Consensus 222 ~~~L~~L~~l~~~--~l~~l---------P~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 222 LENLKKLRARSTY--NLKKL---------PTLEKLVALMEASLTYP 256 (350)
T ss_dssp CTTCCEEECTTCT--TCCCC---------CCTTTCCSCCEEECSCH
T ss_pred hccchHhhhccCC--CcCcC---------CCchhCcChhhCcCCCC
Confidence 7777777666552 23222 23556667777776544
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=9.8e-25 Score=246.48 Aligned_cols=249 Identities=17% Similarity=0.226 Sum_probs=152.7
Q ss_pred CCCcccccccccEEeccCccCcCCcc----CCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCcc
Q 002376 265 IPGSLHNLTNIQIIRMTHNLLEGTLP----PGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQF 340 (929)
Q Consensus 265 ~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 340 (929)
++..+..+++|+.|+|++|.+++..+ ..|..+++|++|+|++|.+. ++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~----------------------------~l 75 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTG----------------------------RV 75 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTT----------------------------SC
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccC----------------------------cc
Confidence 44555666777777777777765422 23444555555555444332 22
Q ss_pred ccccCchh-------hhccccccEEEecCCcccc----ccCCCCCCCCcccEEEeeCCCCCcccCcccc----CC-----
Q 002376 341 EGKIPESI-------GNFSNELSKLYLGGNHIYG----KIPASIGRLRSLTLLDLSYNSISGEIPIEIG----QL----- 400 (929)
Q Consensus 341 ~~~~p~~~-------~~~~~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l----- 400 (929)
++.+|..+ ..+. +|++|+|++|.+++ .+|..+..+++|++|+|++|.+++..+..+. .+
T Consensus 76 ~~~~~~~~~~l~~~l~~~~-~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~ 154 (386)
T 2ca6_A 76 KDEIPEALRLLLQALLKCP-KLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKK 154 (386)
T ss_dssp GGGSHHHHHHHHHHHTTCT-TCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHhhCC-cccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhh
Confidence 23333332 2222 45555555555544 2444455555666666666665433332222 22
Q ss_pred ----CCCCEEEecCCcCC-CCCc---ccccCCCCCceecccCcccc--c---ccCcccccccccceecccCCcCCCCCCC
Q 002376 401 ----QGLQVLGLAGNEIP-GGIP---NSLANLKKLNQIDLSGNELT--G---EIPISFGNFQSLLSIDLSNNRINGNIPK 467 (929)
Q Consensus 401 ----~~L~~L~L~~N~l~-~~~p---~~~~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~g~i~~ 467 (929)
++|++|+|++|+++ +.+| ..+..+++|++|+|++|+++ | ..|..+..+++|+.|+|++|.++..-
T Consensus 155 ~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g-- 232 (386)
T 2ca6_A 155 AKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLG-- 232 (386)
T ss_dssp HHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHH--
T ss_pred cccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHH--
Confidence 66777777777765 3334 35566777777777777776 2 34446777777888888887774100
Q ss_pred CcccCCchhhhcccCccEEEecCCCCCCC----CCcchhc--CcCcceeecccccccc----cCCccc-cCCCCCCEEEC
Q 002376 468 GILRPLPEEISRLENVVTIDLSDNSLSGN----LPNSLKN--CKSLEELLMAYNQFSG----PIPNIV-AELKGLEVLDL 536 (929)
Q Consensus 468 ~~~~~~p~~~~~l~~L~~LdLs~N~l~~~----~p~~~~~--l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~L 536 (929)
...+|..+..+++|+.|+|++|.+++. +|..+.. +++|+.|+|++|.|++ .+|..+ .++++|++|+|
T Consensus 233 --~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l 310 (386)
T 2ca6_A 233 --SSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLEL 310 (386)
T ss_dssp --HHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEEC
T ss_pred --HHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEc
Confidence 011266677778888888888888765 4566633 8889999999999987 477776 66899999999
Q ss_pred CCCcCCCcCC
Q 002376 537 SSNKLSGSIP 546 (929)
Q Consensus 537 s~N~l~~~~p 546 (929)
++|++++..|
T Consensus 311 ~~N~l~~~~~ 320 (386)
T 2ca6_A 311 NGNRFSEEDD 320 (386)
T ss_dssp TTSBSCTTSH
T ss_pred cCCcCCcchh
Confidence 9999997664
No 343
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=2e-22 Score=206.55 Aligned_cols=188 Identities=23% Similarity=0.269 Sum_probs=150.4
Q ss_pred CCCCCCCcceeeCCCCCcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCC
Q 002376 55 SSSPCTWPGVICNNFGNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGE 134 (929)
Q Consensus 55 ~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 134 (929)
....|.|.+|.|+..+ ++ .+|..+ .++|++|+|++|++++..+..|+++++|++|+|++|++++.
T Consensus 3 ~~C~C~~~~v~c~~~~------------l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 67 (208)
T 2o6s_A 3 SRCSCSGTTVECYSQG------------RT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSL 67 (208)
T ss_dssp TTCEEETTEEECCSSC------------CS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCC
T ss_pred CCCEECCCEEEecCCC------------cc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCcc
Confidence 3456899999997643 22 345444 45899999999999977777899999999999999999987
Q ss_pred cccccccccccceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCC
Q 002376 135 LPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAG 214 (929)
Q Consensus 135 ~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~ 214 (929)
.+..|.++++|++|+|++|+++ .+++..|.++++|++|+|++|++++ +.+..|..+++|++|+|++|++++
T Consensus 68 ~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~--------~~~~~~~~l~~L~~L~l~~N~l~~ 138 (208)
T 2o6s_A 68 PNGVFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQS--------LPDGVFDKLTQLKDLRLYQNQLKS 138 (208)
T ss_dssp CTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCC--------CCTTTTTTCTTCCEEECCSSCCSC
T ss_pred ChhhcCCCCCcCEEECCCCcCC-ccCHhHhcCccCCCEEEcCCCcCcc--------cCHhHhccCCcCCEEECCCCccce
Confidence 7778899999999999999998 5777778999999999999998754 233457788999999999999998
Q ss_pred ccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCccccccc
Q 002376 215 TVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSLHNLTN 274 (929)
Q Consensus 215 ~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~l~~ 274 (929)
..+..|..+++|++|+|++|.+.+. +++|+.|++..|+++|.+|..++.+..
T Consensus 139 ~~~~~~~~l~~L~~L~l~~N~~~~~--------~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 139 VPDGVFDRLTSLQYIWLHDNPWDCT--------CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CCTTTTTTCTTCCEEECCSCCBCCC--------TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred eCHHHhccCCCccEEEecCCCeecC--------CCCHHHHHHHHHhCCceeeccCccccC
Confidence 8777888899999999999987643 456666677777777777766665543
No 344
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=4.5e-23 Score=225.34 Aligned_cols=225 Identities=20% Similarity=0.224 Sum_probs=186.5
Q ss_pred cccEEEecCCccccccCC---CCCCCCcccEEEeeCCCCCcccCccc--cCCCCCCEEEecCCcCCCCCc----ccccCC
Q 002376 354 ELSKLYLGGNHIYGKIPA---SIGRLRSLTLLDLSYNSISGEIPIEI--GQLQGLQVLGLAGNEIPGGIP----NSLANL 424 (929)
Q Consensus 354 ~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~l 424 (929)
.++.+.+.++.++...-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 478888888877532110 12234679999999999999999988 999999999999999998655 455689
Q ss_pred CCCceecccCcccccccCcccccccccceecccCCcCCCC--CCCCcccCCchhhhcccCccEEEecCCCCCCCCCc---
Q 002376 425 KKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGN--IPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPN--- 499 (929)
Q Consensus 425 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~--i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~--- 499 (929)
++|++|+|++|++++..|..|.++++|++|+|++|++.+. ++. +..+..+++|++|+|++|+++. +|.
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~------~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~ 217 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMA------ALCPHKFPAIQNLALRNTGMET-PTGVCA 217 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHT------TSCTTSSCCCCSCBCCSSCCCC-HHHHHH
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhH------HHhhhcCCCCCEEECCCCCCCc-hHHHHH
Confidence 9999999999999998889999999999999999998652 111 1224678899999999999973 333
Q ss_pred -chhcCcCcceeecccccccccCCccccCC---CCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCCCCCCC
Q 002376 500 -SLKNCKSLEELLMAYNQFSGPIPNIVAEL---KGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIF 575 (929)
Q Consensus 500 -~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 575 (929)
.++++++|++|+|++|+|++.+|..+..+ ++|++|+|++|+|+ .+|..+. ++|++|+|++|++++. |....+
T Consensus 218 ~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~~~~l 293 (310)
T 4glp_A 218 ALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQPDEL 293 (310)
T ss_dssp HHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CCTTSC
T ss_pred HHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-chhhhC
Confidence 35788999999999999999888888777 69999999999999 6787775 8999999999999985 444567
Q ss_pred CCCCcccccCCCCC
Q 002376 576 RNMSNVHLKGNPKL 589 (929)
Q Consensus 576 ~~l~~l~l~~N~~~ 589 (929)
++++.+++++|+..
T Consensus 294 ~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 294 PEVDNLTLDGNPFL 307 (310)
T ss_dssp CCCSCEECSSTTTS
T ss_pred CCccEEECcCCCCC
Confidence 89999999999864
No 345
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=2.5e-23 Score=243.34 Aligned_cols=207 Identities=25% Similarity=0.321 Sum_probs=168.7
Q ss_pred CCCCCCCCCCC-----CCcce-eeCCCCCcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCc
Q 002376 49 LSYWNPSSSPC-----TWPGV-ICNNFGNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLR 122 (929)
Q Consensus 49 l~~w~~~~~~c-----~w~gv-~c~~~~~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 122 (929)
+.+|..+.++| .|.|+ .|.. .+++.|+|++|++++ +|+.+. ++|++|+|++|+|+ .+| ..+++|+
T Consensus 33 l~~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~ 103 (571)
T 3cvr_A 33 WDKWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLE 103 (571)
T ss_dssp HHHHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCC
T ss_pred HHHHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCC
Confidence 45676666778 79999 6864 479999999999997 888774 89999999999999 777 5579999
Q ss_pred EEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcc
Q 002376 123 VLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENL 202 (929)
Q Consensus 123 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L 202 (929)
+|+|++|+|++ +|. |.+ +|++|+|++|+|++ +|. .+++|++|+|++|++++ +|. .+++|
T Consensus 104 ~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~----~l~~L~~L~Ls~N~l~~-lp~-----------~l~~L 162 (571)
T 3cvr_A 104 YLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE----LPALLEYINADNNQLTM-LPE-----------LPTSL 162 (571)
T ss_dssp EEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCSC-CCC-----------CCTTC
T ss_pred EEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC----cCccccEEeCCCCccCc-CCC-----------cCCCc
Confidence 99999999997 777 766 99999999999996 776 68999999999999865 442 36799
Q ss_pred cEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCc-------ceeeccCCcCCCCCCCcccccccc
Q 002376 203 KVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNL-------LDFIYCFNRFTGKIPGSLHNLTNI 275 (929)
Q Consensus 203 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L-------~~l~l~~N~l~~~~p~~~~~l~~L 275 (929)
++|+|++|+|++ +|. |. ++|++|+|++|+|+ .+|. +.. +| +.|++++|+++. +|..+..+++|
T Consensus 163 ~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~---~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L 232 (571)
T 3cvr_A 163 EVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV---RNHHSEETEIFFRCRENRITH-IPENILSLDPT 232 (571)
T ss_dssp CEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC-----------CCEEEECCSSCCCC-CCGGGGGSCTT
T ss_pred CEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH---hhhcccccceEEecCCCccee-cCHHHhcCCCC
Confidence 999999999997 666 65 89999999999998 7777 433 55 888888888874 67777778888
Q ss_pred cEEeccCccCcCCccCCCCC
Q 002376 276 QIIRMTHNLLEGTLPPGLGN 295 (929)
Q Consensus 276 ~~L~Ls~N~l~~~~p~~~~~ 295 (929)
+.|+|++|.|++.+|..|..
T Consensus 233 ~~L~L~~N~l~~~~p~~l~~ 252 (571)
T 3cvr_A 233 CTIILEDNPLSSRIRESLSQ 252 (571)
T ss_dssp EEEECCSSSCCHHHHHHHHH
T ss_pred CEEEeeCCcCCCcCHHHHHH
Confidence 88888888888777755443
No 346
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.88 E-value=3.1e-24 Score=251.32 Aligned_cols=161 Identities=19% Similarity=0.162 Sum_probs=119.9
Q ss_pred CCceeecccCceeEEeccccC----------------------cHHHHHHHHHHHHccCCccccceeeecccCCCCCcce
Q 002376 664 SHENLIGSGSFGSVLHNERTG----------------------SWKSFIAECETLRNVRHRNLVKLITSCSSLDSKNMEF 721 (929)
Q Consensus 664 ~~~~~iG~G~~g~Vy~~~~~~----------------------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~~~~ 721 (929)
...++||+|+||+||+|...+ ..++|.+|++++++++||||+++..++...+ .
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~-----~ 413 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD-----N 413 (540)
T ss_dssp ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT-----T
T ss_pred CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC-----c
Confidence 446789999999999775431 1345889999999999999996655554322 2
Q ss_pred EEEEEEecCCCCccccccccccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCCceEEeccccccccccccCCCCC
Q 002376 722 LALVYEFLSNGSLGDWIHGERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEMTAKVGDFGLARFLLERVDNQSS 801 (929)
Q Consensus 722 ~~lV~e~~~~gsL~~~l~~~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 801 (929)
.|+||||+++|+|.++++....++.|++.||+|||+. +|+||||||+|||+++ .+||+|||+|+...........
T Consensus 414 ~~lVmE~~~ggsL~~~l~~~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~ 488 (540)
T 3en9_A 414 KRIMMSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVD 488 (540)
T ss_dssp TEEEEECCCSEEHHHHSTTCTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCccccccc
Confidence 5999999999999999988777789999999999998 9999999999999999 9999999999976432110000
Q ss_pred -ccccceeccccccccccccCC--CCCCCCCCCCCC
Q 002376 802 -ISSTHVFMGSIGYVPPEYGLG--ERPSTAGDVPTS 834 (929)
Q Consensus 802 -~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~s~ 834 (929)
.......+||+.|||||++.. ..|+..+|+|+.
T Consensus 489 ~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~ 524 (540)
T 3en9_A 489 LIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEI 524 (540)
T ss_dssp HHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHH
T ss_pred hhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHH
Confidence 001235689999999999876 557778888874
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=7.6e-24 Score=234.37 Aligned_cols=232 Identities=17% Similarity=0.210 Sum_probs=141.1
Q ss_pred CCCCEEEccCCccccccCchhhhccccccEEEecCCccccc-cCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEE
Q 002376 328 THLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGK-IPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVL 406 (929)
Q Consensus 328 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 406 (929)
++++.|++++|.+.+..+. ++.+. +|++|+|++|.+++. +|..+..+++|++|+|++|.+++..|..++.+++|++|
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~-~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L 147 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPF-RVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRL 147 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCB-CCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEE
T ss_pred ccceEEEcCCccccccchh-hccCC-CCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEE
Confidence 4555555555555544433 33333 566666666666544 55556666666666666666666666666666667777
Q ss_pred EecCC-cCCC-CCcccccCCCCCceecccCc-ccccc-cCccccccc-ccceecccCC--cCCCCCCCCcccCCchhhhc
Q 002376 407 GLAGN-EIPG-GIPNSLANLKKLNQIDLSGN-ELTGE-IPISFGNFQ-SLLSIDLSNN--RINGNIPKGILRPLPEEISR 479 (929)
Q Consensus 407 ~L~~N-~l~~-~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~-~L~~L~Ls~N--~l~g~i~~~~~~~~p~~~~~ 479 (929)
++++| .+++ .++..+.++++|++|++++| .+++. ++..+..++ +|++|++++| .++. ..+|..+..
T Consensus 148 ~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~-------~~l~~~~~~ 220 (336)
T 2ast_B 148 NLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQK-------SDLSTLVRR 220 (336)
T ss_dssp ECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCH-------HHHHHHHHH
T ss_pred ECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCH-------HHHHHHHhh
Confidence 77666 4554 24555666677777777777 66643 455566666 7777777777 3331 112555666
Q ss_pred ccCccEEEecCCC-CCCCCCcchhcCcCcceeeccccc-ccccCCccccCCCCCCEEECCCCcCCCcCCcccccCC-CCC
Q 002376 480 LENVVTIDLSDNS-LSGNLPNSLKNCKSLEELLMAYNQ-FSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQ-ALR 556 (929)
Q Consensus 480 l~~L~~LdLs~N~-l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~ 556 (929)
+++|+.|+|++|. +++..+..+..+++|++|++++|. ++......++.+++|+.|++++| ++ ...+..+. .|+
T Consensus 221 ~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~ 296 (336)
T 2ast_B 221 CPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALP 296 (336)
T ss_dssp CTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHST
T ss_pred CCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCc
Confidence 7777777777777 665666677777777777777774 22221224666777777777777 32 22334442 366
Q ss_pred eEeCCCCcCcccCCCC
Q 002376 557 SLNLTFNNLEGVVPSE 572 (929)
Q Consensus 557 ~L~Ls~N~l~~~~p~~ 572 (929)
.|++++|++++..|..
T Consensus 297 ~L~l~~n~l~~~~~~~ 312 (336)
T 2ast_B 297 HLQINCSHFTTIARPT 312 (336)
T ss_dssp TSEESCCCSCCTTCSS
T ss_pred ceEEecccCccccCCc
Confidence 6667777777776643
No 348
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=2e-22 Score=219.74 Aligned_cols=189 Identities=25% Similarity=0.352 Sum_probs=88.4
Q ss_pred ccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccC
Q 002376 355 LSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSG 434 (929)
Q Consensus 355 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 434 (929)
|++|++++|.++. +| .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++. + .+..+++|++|+|++
T Consensus 43 L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l~~ 116 (308)
T 1h6u_A 43 ITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLDLTS 116 (308)
T ss_dssp CCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEECTT
T ss_pred cCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEECCC
Confidence 4444444444432 12 23444444444444444443222 44444444444444444432 1 344444455555555
Q ss_pred cccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeeccc
Q 002376 435 NELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAY 514 (929)
Q Consensus 435 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~ 514 (929)
|++++. +. +..+++|+.|++++|++++. +. +..+++|+.|+|++|++++..+ +..+++|+.|++++
T Consensus 117 n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~---------~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~ 182 (308)
T 1h6u_A 117 TQITDV-TP-LAGLSNLQVLYLDLNQITNI---------SP-LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADD 182 (308)
T ss_dssp SCCCCC-GG-GTTCTTCCEEECCSSCCCCC---------GG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred CCCCCc-hh-hcCCCCCCEEECCCCccCcC---------cc-ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCC
Confidence 544432 11 44445555555555554421 11 4444555555555555553222 55555555555555
Q ss_pred ccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcc
Q 002376 515 NQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEG 567 (929)
Q Consensus 515 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 567 (929)
|++++..+ +..+++|+.|+|++|++++..| +..+++|+.|++++|++++
T Consensus 183 n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 183 NKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp SCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred CccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 55554332 4555555555555555554332 4555555555555555554
No 349
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=7.2e-22 Score=215.37 Aligned_cols=199 Identities=24% Similarity=0.350 Sum_probs=171.6
Q ss_pred ccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCC
Q 002376 323 SLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQG 402 (929)
Q Consensus 323 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 402 (929)
.+..+++|++|++++|.++ .+| .+..+. +|++|+|++|++++..+ +..+++|++|+|++|++++. ..+..+++
T Consensus 36 ~~~~l~~L~~L~l~~~~i~-~l~-~~~~l~-~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~ 108 (308)
T 1h6u_A 36 TQADLDGITTLSAFGTGVT-TIE-GVQYLN-NLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQS 108 (308)
T ss_dssp CHHHHHTCCEEECTTSCCC-CCT-TGGGCT-TCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTT
T ss_pred cHHHcCCcCEEEeeCCCcc-Cch-hhhccC-CCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCC
Confidence 3456789999999999998 455 577776 79999999999997655 99999999999999999864 36899999
Q ss_pred CCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccC
Q 002376 403 LQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLEN 482 (929)
Q Consensus 403 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~ 482 (929)
|++|++++|++++. +. +..+++|++|++++|++++..+ +..+++|+.|++++|++++. +. +..+++
T Consensus 109 L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~---------~~-l~~l~~ 174 (308)
T 1h6u_A 109 IKTLDLTSTQITDV-TP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL---------TP-LANLSK 174 (308)
T ss_dssp CCEEECTTSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC---------GG-GTTCTT
T ss_pred CCEEECCCCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC---------hh-hcCCCC
Confidence 99999999999874 43 8999999999999999987554 88999999999999999752 33 788899
Q ss_pred ccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCc
Q 002376 483 VVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPS 547 (929)
Q Consensus 483 L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 547 (929)
|+.|+|++|++++..+ +..+++|++|+|++|++++..| +..+++|+.|+|++|++++ .|.
T Consensus 175 L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~-~~~ 234 (308)
T 1h6u_A 175 LTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN-QPV 234 (308)
T ss_dssp CCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC-CCE
T ss_pred CCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec-CCe
Confidence 9999999999996544 8899999999999999997664 8999999999999999985 443
No 350
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=2.3e-21 Score=215.49 Aligned_cols=105 Identities=18% Similarity=0.146 Sum_probs=66.2
Q ss_pred CcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcce-eeccCCcCCCCCCCcccccccccEE
Q 002376 200 ENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLD-FIYCFNRFTGKIPGSLHNLTNIQII 278 (929)
Q Consensus 200 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~-l~l~~N~l~~~~p~~~~~l~~L~~L 278 (929)
++++.|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+|...+..++++.+ +.+..|++++..|..|.++++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 356677777777776555667777777777777777766666666665666544 3444566666666667777777777
Q ss_pred eccCccCcCCccCCCCCCCccceecc
Q 002376 279 RMTHNLLEGTLPPGLGNLPFLRTYNI 304 (929)
Q Consensus 279 ~Ls~N~l~~~~p~~~~~l~~L~~L~L 304 (929)
++++|+|++..+..+.....+..+++
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l 135 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDI 135 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEE
T ss_pred cccccccccCCchhhcccchhhhhhh
Confidence 77777776555444444444444443
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=4.1e-21 Score=196.74 Aligned_cols=181 Identities=21% Similarity=0.217 Sum_probs=126.4
Q ss_pred CEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecC
Q 002376 331 NYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAG 410 (929)
Q Consensus 331 ~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 410 (929)
+.++.+++.++ .+|..+. .+|++|++++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 10 ~~v~c~~~~l~-~~p~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGIP---AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCcc-CCCCCCC---CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 45666777766 4554432 3678888888888776666777888888888888888766666677778888888888
Q ss_pred CcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecC
Q 002376 411 NEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSD 490 (929)
Q Consensus 411 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~ 490 (929)
|++++..+..|.++++|++|+|++|++++..+..|.++++|++|++++|++++.. +..+..+++|+.|+|++
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~--------~~~~~~l~~L~~L~l~~ 157 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVP--------DGVFDRLTSLQYIWLHD 157 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC--------TTTTTTCTTCCEEECCS
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeC--------HHHhccCCCccEEEecC
Confidence 8887766666777777888888888777666666777777777777777776422 23355666777777777
Q ss_pred CCCCCCCCcchhcCcCcceeecccccccccCCccccCCCC
Q 002376 491 NSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKG 530 (929)
Q Consensus 491 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 530 (929)
|.+.+. +++|++|+++.|+++|.+|..++.++.
T Consensus 158 N~~~~~-------~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 158 NPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CCBCCC-------TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CCeecC-------CCCHHHHHHHHHhCCceeeccCccccC
Confidence 766543 345677777777777777766665543
No 352
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=1.1e-20 Score=196.66 Aligned_cols=165 Identities=25% Similarity=0.294 Sum_probs=140.9
Q ss_pred CCCCCCCCCCCcceeeCCCCCcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCC
Q 002376 51 YWNPSSSPCTWPGVICNNFGNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNN 130 (929)
Q Consensus 51 ~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 130 (929)
-|..+.+.|+|.+|.|+... + +.+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 11 ~~~~~~~~Cs~~~v~c~~~~------------l-~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~ 75 (229)
T 3e6j_A 11 AACPSQCSCSGTTVDCRSKR------------H-ASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQ 75 (229)
T ss_dssp CCCCTTCEEETTEEECTTSC------------C-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ccCCCCCEEeCCEeEccCCC------------c-CccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCC
Confidence 35557788999999997532 2 25666554 899999999999999999999999999999999999
Q ss_pred CCCCcccccccccccceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecc
Q 002376 131 LQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTIN 210 (929)
Q Consensus 131 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N 210 (929)
|++..+..|..+++|++|+|++|+|+ .+++..|..+++|++|+|++|+++ .+ |..+..+++|++|+|++|
T Consensus 76 l~~i~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~~l~~L~~L~Ls~N~l~-~l--------p~~~~~l~~L~~L~L~~N 145 (229)
T 3e6j_A 76 LGALPVGVFDSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-EL--------PRGIERLTHLTHLALDQN 145 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCC-SC--------CTTGGGCTTCSEEECCSS
T ss_pred CCCcChhhcccCCCcCEEECCCCcCC-ccChhHhCcchhhCeEeccCCccc-cc--------CcccccCCCCCEEECCCC
Confidence 99777788899999999999999998 577777899999999999999885 33 445677899999999999
Q ss_pred cCCCccCCccccCCCCceEEeeecCCCCcC
Q 002376 211 RLAGTVPSTIYNMTSLVHLRLASNQLGGEI 240 (929)
Q Consensus 211 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i 240 (929)
+|++..+..|..+++|++|+|++|.+.+..
T Consensus 146 ~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 146 QLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred cCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 999888888999999999999999887543
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=1.1e-20 Score=221.14 Aligned_cols=188 Identities=24% Similarity=0.344 Sum_probs=135.5
Q ss_pred CCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEe
Q 002376 329 HLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGL 408 (929)
Q Consensus 329 ~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 408 (929)
+|+.|+|++|++++ +|..++ ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.. +|++|+|
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~---~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~L 127 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP---PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDV 127 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC---TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEEC
T ss_pred CccEEEeCCCCCCc-cCHhHc---CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEEC
Confidence 78888888888885 776553 36888888888888 455 446788888888888886 666 554 7888888
Q ss_pred cCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEe
Q 002376 409 AGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDL 488 (929)
Q Consensus 409 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdL 488 (929)
++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +| . +. ++|+.|||
T Consensus 128 s~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp--------~-l~--~~L~~L~L 187 (571)
T 3cvr_A 128 DNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LP--------E-LP--ESLEALDV 187 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC--------C-CC--TTCCEEEC
T ss_pred CCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cc--------h-hh--CCCCEEEC
Confidence 8888876 554 56788888888888875 554 46778888888888775 43 2 22 67888888
Q ss_pred cCCCCCCCCCcchhcCcCc-------ceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCC
Q 002376 489 SDNSLSGNLPNSLKNCKSL-------EELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQ 553 (929)
Q Consensus 489 s~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 553 (929)
++|+|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..+..+.
T Consensus 188 s~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 188 STNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp CSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred cCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 888887 5555 543 56 77777777777 4566666677777777777777777777666554
No 354
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.83 E-value=1.3e-21 Score=237.50 Aligned_cols=231 Identities=20% Similarity=0.203 Sum_probs=129.1
Q ss_pred CChhhHHHHHHHHhhcCCCCCCCCCCCCC-CCCCCCCCcceeeCCCCCcEEEEEcCCCCCccccCCCCCCCCCCCEEEee
Q 002376 25 GINTDKEALMSFKSQISQESPSSPLSYWN-PSSSPCTWPGVICNNFGNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQ 103 (929)
Q Consensus 25 ~~~~~~~aLl~~k~~~~~~~~~~~l~~w~-~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls 103 (929)
..+.+++||+++..+.... ....-..|. .....+.|.++.++. .+++.++|.++++.+ ++..+ |+.++|+
T Consensus 129 ~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~-~~~~~-----l~~l~Ls 199 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDS-KTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDE-ANQAL-----LQHKKLS 199 (727)
T ss_dssp ---CCCHHHHHHHHHHHHH-HTTC--------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccc-cCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCc-chhhH-----hhcCccC
Confidence 3468899999999887443 223334564 334567899988875 579999999998886 34443 3444444
Q ss_pred cCCCCC---------CCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhccCCCCcEEE
Q 002376 104 NNKLSG---------NLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLN 174 (929)
Q Consensus 104 ~N~l~~---------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~ 174 (929)
.|.|.+ ..|..|..+++|+.|+|++|.+. .+|..+.++++|++|+|++|+|+ .+|.. |++|++|++|+
T Consensus 200 ~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~-~~~l~~L~~L~ 276 (727)
T 4b8c_D 200 QYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAE-IKNLSNLRVLD 276 (727)
T ss_dssp ----------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGG-GGGGTTCCEEE
T ss_pred cccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChh-hhCCCCCCEEe
Confidence 444433 45788999999999999999998 67777889999999999999998 78866 89999999999
Q ss_pred ccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCccee
Q 002376 175 FGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDF 254 (929)
Q Consensus 175 Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l 254 (929)
|++|+|+ .+ |..|+.|++|++|+|++|.|+ .+|..|.++++|++|+|++|.|++.+|..+......+..+
T Consensus 277 Ls~N~l~-~l--------p~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l 346 (727)
T 4b8c_D 277 LSHNRLT-SL--------PAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIF 346 (727)
T ss_dssp CTTSCCS-SC--------CSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHH
T ss_pred CcCCcCC-cc--------ChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHH
Confidence 9999885 33 455677899999999999997 6677899999999999999999988777665422223446
Q ss_pred eccCCcCCCCCCCcccccccccEEeccCc
Q 002376 255 IYCFNRFTGKIPGSLHNLTNIQIIRMTHN 283 (929)
Q Consensus 255 ~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N 283 (929)
++.+|.+++.+|.. |+.|++++|
T Consensus 347 ~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 347 YLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp HHHHCCCCCCCCCC---------------
T ss_pred hhccCcccCcCccc------cceeEeecc
Confidence 77888888877754 445566665
No 355
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=7.3e-20 Score=188.95 Aligned_cols=159 Identities=25% Similarity=0.323 Sum_probs=137.4
Q ss_pred CCCCCCCcceeeCCCCCcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCC
Q 002376 55 SSSPCTWPGVICNNFGNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGE 134 (929)
Q Consensus 55 ~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 134 (929)
....|.|..|.|.. ++++ .+|..+. ++|++|+|++|+|++..+..|..+++|++|+|++|+|++.
T Consensus 7 ~~C~C~~~~v~c~~------------~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~ 71 (220)
T 2v9t_B 7 AACTCSNNIVDCRG------------KGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISEL 71 (220)
T ss_dssp TTSEEETTEEECTT------------SCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEE
T ss_pred CCCEECCCEEEcCC------------CCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCc
Confidence 33446777666654 4454 5676665 7899999999999988888999999999999999999988
Q ss_pred cccccccccccceecccccccCCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCC
Q 002376 135 LPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAG 214 (929)
Q Consensus 135 ~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~ 214 (929)
.|..|.++++|++|+|++|+|+ .+|+..|.++++|++|+|++|++++. .|..|..+++|++|+|++|+|++
T Consensus 72 ~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~--------~~~~~~~l~~L~~L~L~~N~l~~ 142 (220)
T 2v9t_B 72 APDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCL--------RVDAFQDLHNLNLLSLYDNKLQT 142 (220)
T ss_dssp CTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCC--------CTTTTTTCTTCCEEECCSSCCSC
T ss_pred CHHHhhCCcCCCEEECCCCcCC-ccCHhHccCCCCCCEEECCCCCCCEe--------CHHHcCCCCCCCEEECCCCcCCE
Confidence 8999999999999999999998 68888899999999999999988553 45567889999999999999999
Q ss_pred ccCCccccCCCCceEEeeecCCC
Q 002376 215 TVPSTIYNMTSLVHLRLASNQLG 237 (929)
Q Consensus 215 ~~p~~~~~l~~L~~L~Ls~N~l~ 237 (929)
..+..|..+++|++|+|++|.+.
T Consensus 143 ~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 143 IAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCTTTTTTCTTCCEEECCSSCEE
T ss_pred ECHHHHhCCCCCCEEEeCCCCcC
Confidence 88888999999999999999886
No 356
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=4.6e-20 Score=190.48 Aligned_cols=136 Identities=24% Similarity=0.277 Sum_probs=81.4
Q ss_pred CceecccCcccccccC-cccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCc
Q 002376 427 LNQIDLSGNELTGEIP-ISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCK 505 (929)
Q Consensus 427 L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~ 505 (929)
+++|+|++|++++..| ..|.++++|+.|+|++|+|++.. +..|..+++|++|+|++|++++..|..|.+++
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~--------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 105 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIE--------EGAFEGASGVNEILLTSNRLENVQHKMFKGLE 105 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEEC--------TTTTTTCTTCCEEECCSSCCCCCCGGGGTTCS
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEEC--------HHHhCCCCCCCEEECCCCccCccCHhHhcCCc
Confidence 3444555555544322 23445555555555555554321 23444555556666666666655556666666
Q ss_pred CcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCC
Q 002376 506 SLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVP 570 (929)
Q Consensus 506 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 570 (929)
+|++|+|++|+|++..|..|..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+
T Consensus 106 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 106 SLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 67777777777766666667777777777777777776666677777777777777777765443
No 357
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=9.3e-20 Score=203.40 Aligned_cols=74 Identities=31% Similarity=0.351 Sum_probs=35.1
Q ss_pred ccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccc---cCCCCCCEEECCCCcCCCcCCcccccCC
Q 002376 480 LENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIV---AELKGLEVLDLSSNKLSGSIPSDLQNLQ 553 (929)
Q Consensus 480 l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 553 (929)
+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|||++|+|++..+..+..++
T Consensus 111 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~ 187 (361)
T 2xot_A 111 LQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLP 187 (361)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSC
T ss_pred CcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhcc
Confidence 3344444444444443444445555555555555555554333333 3455666666666666543334444443
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=2.9e-19 Score=192.97 Aligned_cols=168 Identities=26% Similarity=0.342 Sum_probs=86.9
Q ss_pred cccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceeccc
Q 002376 354 ELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLS 433 (929)
Q Consensus 354 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 433 (929)
+|+.|++++|.+... + .+..+++|++|+|++|++++..+ +..+++|++|++++|++++ +| .+.
T Consensus 47 ~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~----------- 109 (291)
T 1h6t_A 47 SIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLK----------- 109 (291)
T ss_dssp TCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGT-----------
T ss_pred cccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhc-----------
Confidence 455555555555433 2 24555555555555555554332 4455555555555555543 11 244
Q ss_pred CcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecc
Q 002376 434 GNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMA 513 (929)
Q Consensus 434 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls 513 (929)
.+++|+.|++++|++++ ...+..+++|+.|++++|++++. ..+..+++|+.|+|+
T Consensus 110 -------------~l~~L~~L~L~~n~i~~----------~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~ 164 (291)
T 1h6t_A 110 -------------DLKKLKSLSLEHNGISD----------INGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLE 164 (291)
T ss_dssp -------------TCTTCCEEECTTSCCCC----------CGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECC
T ss_pred -------------cCCCCCEEECCCCcCCC----------ChhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEcc
Confidence 44455555555554442 11344445555555555555543 345555566666666
Q ss_pred cccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcc
Q 002376 514 YNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEG 567 (929)
Q Consensus 514 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 567 (929)
+|++++..| +..+++|+.|+|++|++++ +| .+..+++|+.|++++|+++.
T Consensus 165 ~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 165 DNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp SSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 666654443 5556666666666666654 23 25556666666666666554
No 359
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=3.5e-19 Score=183.85 Aligned_cols=153 Identities=24% Similarity=0.336 Sum_probs=79.2
Q ss_pred cEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCC
Q 002376 380 TLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNN 459 (929)
Q Consensus 380 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 459 (929)
+.+++++|.++ .+|..+. ++|+.|+|++|+|++..+..|..+++|++|+|++|++++..|..|.++
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l----------- 79 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGL----------- 79 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTC-----------
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCC-----------
Confidence 34555555555 3343332 344555555555444444444444444444444444444444444444
Q ss_pred cCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCC
Q 002376 460 RINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSN 539 (929)
Q Consensus 460 ~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 539 (929)
++|++|+|++|++++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 80 ---------------------~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 138 (220)
T 2v9t_B 80 ---------------------RSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDN 138 (220)
T ss_dssp ---------------------SSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred ---------------------cCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCC
Confidence 44444444444444443444555555555555555555555555666666666666666
Q ss_pred cCCCcCCcccccCCCCCeEeCCCCcCcc
Q 002376 540 KLSGSIPSDLQNLQALRSLNLTFNNLEG 567 (929)
Q Consensus 540 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 567 (929)
+|++..+..|..+++|+.|+|++|++.+
T Consensus 139 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 139 KLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 6665555555555566666655555543
No 360
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=2.4e-19 Score=193.64 Aligned_cols=145 Identities=21% Similarity=0.358 Sum_probs=111.0
Q ss_pred ccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCC
Q 002376 298 FLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLR 377 (929)
Q Consensus 298 ~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 377 (929)
.+..+.++.+.+... ..+..+++|++|++++|.++. +| .+..+. +|++|+|++|++++..+ +.+++
T Consensus 25 ~~~~~~l~~~~~~~~---------~~~~~l~~L~~L~l~~~~i~~-~~-~~~~l~-~L~~L~L~~n~l~~~~~--l~~l~ 90 (291)
T 1h6t_A 25 ETIKDNLKKKSVTDA---------VTQNELNSIDQIIANNSDIKS-VQ-GIQYLP-NVTKLFLNGNKLTDIKP--LANLK 90 (291)
T ss_dssp HHHHHHTTCSCTTSE---------ECHHHHHTCCEEECTTSCCCC-CT-TGGGCT-TCCEEECCSSCCCCCGG--GTTCT
T ss_pred HHHHHHhcCCCcccc---------cchhhcCcccEEEccCCCccc-Ch-hHhcCC-CCCEEEccCCccCCCcc--cccCC
Confidence 344556666655432 335567899999999999984 44 467766 89999999999998665 99999
Q ss_pred cccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceeccc
Q 002376 378 SLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLS 457 (929)
Q Consensus 378 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 457 (929)
+|++|+|++|++++ +| .+..+++|++|++++|++++. ..+..+++|++|++++|++++. ..+..+++|+.|+++
T Consensus 91 ~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~ 164 (291)
T 1h6t_A 91 NLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLE 164 (291)
T ss_dssp TCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECC
T ss_pred CCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEcc
Confidence 99999999999986 33 489999999999999999864 4577778888888888877753 345566666666666
Q ss_pred CCcCC
Q 002376 458 NNRIN 462 (929)
Q Consensus 458 ~N~l~ 462 (929)
+|+++
T Consensus 165 ~N~l~ 169 (291)
T 1h6t_A 165 DNQIS 169 (291)
T ss_dssp SSCCC
T ss_pred CCccc
Confidence 66655
No 361
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=3.4e-19 Score=183.96 Aligned_cols=155 Identities=24% Similarity=0.244 Sum_probs=105.4
Q ss_pred EEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCc-ccccCCCCCceecccCcccccccCcccccccccceecccCC
Q 002376 381 LLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIP-NSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNN 459 (929)
Q Consensus 381 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 459 (929)
.+++++|.++ .+|..+. ..+++|+|++|+|++..| ..|..+++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 4444444444 2333321 234455555555554433 34566666666666666666666666777777777777777
Q ss_pred cCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCC
Q 002376 460 RINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSN 539 (929)
Q Consensus 460 ~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 539 (929)
+|++.. |..+..+++|++|+|++|++++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 92 ~l~~~~--------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 163 (220)
T 2v70_A 92 RLENVQ--------HKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLAN 163 (220)
T ss_dssp CCCCCC--------GGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred ccCccC--------HhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCc
Confidence 776432 445666777778888888888777888888888888889888888888888888999999999999
Q ss_pred cCCCcCC
Q 002376 540 KLSGSIP 546 (929)
Q Consensus 540 ~l~~~~p 546 (929)
.+++..+
T Consensus 164 ~l~c~c~ 170 (220)
T 2v70_A 164 PFNCNCY 170 (220)
T ss_dssp CEECSGG
T ss_pred CCcCCCc
Confidence 8886544
No 362
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=2.6e-19 Score=199.76 Aligned_cols=179 Identities=22% Similarity=0.242 Sum_probs=128.4
Q ss_pred CEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCC-CCCcccEEEeeCCCCCcccCccccCCCCCCEEEec
Q 002376 331 NYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIG-RLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLA 409 (929)
Q Consensus 331 ~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 409 (929)
+.+++++|+++ .+|..+. ..++.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 21 ~~l~c~~~~l~-~iP~~~~---~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP---SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC---TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcC-ccCccCC---CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 57888888887 5776543 3688888888888888788787 88888888888888887777778888888888888
Q ss_pred CCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEec
Q 002376 410 GNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLS 489 (929)
Q Consensus 410 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs 489 (929)
+|+|++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++ +|...+. .+..+++|+.|||+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~----~~~~l~~L~~L~L~ 171 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPVELIK----DGNKLPKLMLLDLS 171 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCGGGTC--------CTTCCEEECC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-eCHHHhc----CcccCCcCCEEECC
Confidence 888887777778888888888888888887777788888888888888888763 3211110 01345666666666
Q ss_pred CCCCCCCCCcchhcCcCc--ceeeccccccc
Q 002376 490 DNSLSGNLPNSLKNCKSL--EELLMAYNQFS 518 (929)
Q Consensus 490 ~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l~ 518 (929)
+|+|++..+..|..++.+ +.|+|++|.+.
T Consensus 172 ~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 172 SNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp SSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 666665444555555542 45555555543
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=1.7e-19 Score=213.40 Aligned_cols=190 Identities=23% Similarity=0.320 Sum_probs=109.3
Q ss_pred ccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhcccc
Q 002376 275 IQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNE 354 (929)
Q Consensus 275 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 354 (929)
+..+++..+.+....+ +..|++|+.|++++|.|..+ ..+..+++|+.|+|++|++++..| +..+. +
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l---------~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~-~ 88 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV---------QGIQYLPNVTKLFLNGNKLTDIKP--LTNLK-N 88 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC---------TTGGGCTTCCEEECTTSCCCCCGG--GGGCT-T
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC---------hHHccCCCCCEEEeeCCCCCCChh--hccCC-C
Confidence 3444444444443322 34455555555555555433 234556666666666666664333 55554 5
Q ss_pred ccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccC
Q 002376 355 LSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSG 434 (929)
Q Consensus 355 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 434 (929)
|+.|+|++|.|.+. ..+..+++|++|+|++|+|++. ..+..+++|+.|+|++|+|++. ..+..+++|+.|+|++
T Consensus 89 L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~ 162 (605)
T 1m9s_A 89 LGWLFLDENKIKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLED 162 (605)
T ss_dssp CCEEECCSSCCCCC--TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCS
T ss_pred CCEEECcCCCCCCC--hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcC
Confidence 66666666666642 2566666777777777766642 3466666666666666666654 4566666666666666
Q ss_pred cccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCC
Q 002376 435 NELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGN 496 (929)
Q Consensus 435 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~ 496 (929)
|+|++..| +..+++|+.|+|++|+|++ + ..+..+++|+.|+|++|.+++.
T Consensus 163 N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l---------~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 163 NQISDIVP--LAGLTKLQNLYLSKNHISD-L---------RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp SCCCCCGG--GTTCTTCCEEECCSSCCCB-C---------GGGTTCTTCSEEECCSEEEECC
T ss_pred CcCCCchh--hccCCCCCEEECcCCCCCC-C---------hHHccCCCCCEEEccCCcCcCC
Confidence 66665544 5666666666666666653 1 1345555666666666665543
No 364
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=7.7e-22 Score=232.17 Aligned_cols=206 Identities=20% Similarity=0.135 Sum_probs=139.1
Q ss_pred cCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCC
Q 002376 324 LTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGL 403 (929)
Q Consensus 324 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 403 (929)
+...++|+.|+|++|+++ .+|+.++.+. +|+.|++++|......|. .+..+.+.+..|..++.+++|
T Consensus 345 ~~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~-~L~~L~l~~n~~l~~l~~-----------ll~~~~~~~~~~~~l~~l~~L 411 (567)
T 1dce_A 345 SATDEQLFRCELSVEKST-VLQSELESCK-ELQELEPENKWCLLTIIL-----------LMRALDPLLYEKETLQYFSTL 411 (567)
T ss_dssp CSTTTTSSSCCCCHHHHH-HHHHHHHHHH-HHHHHCTTCHHHHHHHHH-----------HHHHHCTGGGHHHHHHHHHHH
T ss_pred cccCccceeccCChhhHH-hhHHHHHHHH-HHHHhccccchhhhhHHH-----------HHHhcccccCCHHHHHHHHhc
Confidence 355678888888888887 7888888887 688888877652111111 011223445666667777777
Q ss_pred CEEE-ecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccC
Q 002376 404 QVLG-LAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLEN 482 (929)
Q Consensus 404 ~~L~-L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~ 482 (929)
+.|+ ++.|.+ ..|+.+.+++|.++...+. .|+.|+|++|+|++ + |. ++.+++
T Consensus 412 ~~L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~~-l--------p~-~~~l~~ 464 (567)
T 1dce_A 412 KAVDPMRAAYL-----------DDLRSKFLLENSVLKMEYA------DVRVLHLAHKDLTV-L--------CH-LEQLLL 464 (567)
T ss_dssp HHHCGGGHHHH-----------HHHHHHHHHHHHHHHHHHT------TCSEEECTTSCCSS-C--------CC-GGGGTT
T ss_pred ccCcchhhccc-----------chhhhhhhhcccccccCcc------CceEEEecCCCCCC-C--------cC-cccccc
Confidence 7776 555544 2455566666666643221 36777777777764 2 43 667777
Q ss_pred ccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcC-CcccccCCCCCeEeCC
Q 002376 483 VVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSI-PSDLQNLQALRSLNLT 561 (929)
Q Consensus 483 L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls 561 (929)
|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .++.+++|++|+|++|+|++.+ |..+..+++|+.|+|+
T Consensus 465 L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~ 541 (567)
T 1dce_A 465 VTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQ 541 (567)
T ss_dssp CCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECT
T ss_pred CcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEec
Confidence 777777777777 667777777777777777777775 45 6777777777777777777665 7777777777777777
Q ss_pred CCcCcccCCCC
Q 002376 562 FNNLEGVVPSE 572 (929)
Q Consensus 562 ~N~l~~~~p~~ 572 (929)
+|++++.+|..
T Consensus 542 ~N~l~~~~~~~ 552 (567)
T 1dce_A 542 GNSLCQEEGIQ 552 (567)
T ss_dssp TSGGGGSSSCT
T ss_pred CCcCCCCccHH
Confidence 77777776644
No 365
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=6.6e-19 Score=208.38 Aligned_cols=169 Identities=30% Similarity=0.385 Sum_probs=98.8
Q ss_pred cccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceeccc
Q 002376 354 ELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLS 433 (929)
Q Consensus 354 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 433 (929)
.|+.|++++|.|... | .+..+++|+.|+|++|+|++..| +..+++|+.|+|++|.|++ +| .+..+++|+.|+|+
T Consensus 44 ~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls 117 (605)
T 1m9s_A 44 SIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLE 117 (605)
T ss_dssp TCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECT
T ss_pred CCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEec
Confidence 466666666665532 2 35566666666666666665433 5566666666666666654 22 45666666666666
Q ss_pred CcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecc
Q 002376 434 GNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMA 513 (929)
Q Consensus 434 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls 513 (929)
+|++++. ..+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++..| +..+++|+.|+|+
T Consensus 118 ~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l----------~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 183 (605)
T 1m9s_A 118 HNGISDI--NGLVHLPQLESLYLGNNKITDI----------TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLS 183 (605)
T ss_dssp TSCCCCC--GGGGGCTTCSEEECCSSCCCCC----------GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred CCCCCCC--ccccCCCccCEEECCCCccCCc----------hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECc
Confidence 6666542 2355566666666666666531 234555666666666666665444 5666666666666
Q ss_pred cccccccCCccccCCCCCCEEECCCCcCCCc
Q 002376 514 YNQFSGPIPNIVAELKGLEVLDLSSNKLSGS 544 (929)
Q Consensus 514 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 544 (929)
+|+|++. | .+..+++|+.|+|++|++++.
T Consensus 184 ~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 184 KNHISDL-R-ALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp SSCCCBC-G-GGTTCTTCSEEECCSEEEECC
T ss_pred CCCCCCC-h-HHccCCCCCEEEccCCcCcCC
Confidence 6666643 2 456666666666666666543
No 366
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=9.1e-20 Score=221.27 Aligned_cols=191 Identities=23% Similarity=0.234 Sum_probs=109.8
Q ss_pred EecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccc
Q 002376 359 YLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELT 438 (929)
Q Consensus 359 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 438 (929)
+++.|.+. ..|..|..+++|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|.++++|++|||++|+|+
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 44445554 55777788888888888888887 56766778888888888888887 67777888888888888888888
Q ss_pred cccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcC-cceeecccccc
Q 002376 439 GEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKS-LEELLMAYNQF 517 (929)
Q Consensus 439 ~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l 517 (929)
.+|..|+++++|++|+|++|.|+ .| |..|+.+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+
T Consensus 284 -~lp~~~~~l~~L~~L~L~~N~l~-~l--------p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l 353 (727)
T 4b8c_D 284 -SLPAELGSCFQLKYFYFFDNMVT-TL--------PWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRP 353 (727)
T ss_dssp -SCCSSGGGGTTCSEEECCSSCCC-CC--------CSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred -ccChhhcCCCCCCEEECCCCCCC-cc--------ChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcc
Confidence 66888888888888888888875 33 556777888888888888888888877765532 23477888888
Q ss_pred cccCCccccCCCCCCEEECCCC--------cCCCcCCcccccCCCCCeEeCCCCcCccc
Q 002376 518 SGPIPNIVAELKGLEVLDLSSN--------KLSGSIPSDLQNLQALRSLNLTFNNLEGV 568 (929)
Q Consensus 518 ~~~~p~~~~~l~~L~~L~Ls~N--------~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 568 (929)
+|.+|. .|+.|++++| .|.+..+..+.++..+....+++|-+.+.
T Consensus 354 ~~~~p~------~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~ 406 (727)
T 4b8c_D 354 EIPLPH------ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQH 406 (727)
T ss_dssp CCCCCC------C-----------------------------------------CCCGG
T ss_pred cCcCcc------ccceeEeecccccccccCCccccccchhhcccccceeeeeccccccc
Confidence 887775 3455667666 34444444555566666667777766544
No 367
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.77 E-value=1.3e-19 Score=194.21 Aligned_cols=136 Identities=18% Similarity=0.088 Sum_probs=108.3
Q ss_pred HHHHHhhCCCCCceeecccCceeEEeccccC---------------------------------cHHHHHHHHHHHHccC
Q 002376 654 DELRRATGNFSHENLIGSGSFGSVLHNERTG---------------------------------SWKSFIAECETLRNVR 700 (929)
Q Consensus 654 ~~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~---------------------------------~~~~~~~E~~~l~~l~ 700 (929)
..+......|+..+.||+|+||.||+|.+.. ....+.+|++++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 3445555667778999999999999987530 1345889999999999
Q ss_pred CccccceeeecccCCCCCcceEEEEEEecCCCCcccccc--ccccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCC
Q 002376 701 HRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIH--GERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEE 778 (929)
Q Consensus 701 Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~--~~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~ 778 (929)
| +++.+++.. ...|+||||+++|+|.+ +. ....++.|++.||+|||+. +|+||||||+|||++ +
T Consensus 163 --~-~~v~~~~~~------~~~~lvmE~~~g~~L~~-l~~~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~ 228 (282)
T 1zar_A 163 --G-LAVPKVYAW------EGNAVLMELIDAKELYR-VRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-E 228 (282)
T ss_dssp --T-SSSCCEEEE------ETTEEEEECCCCEEGGG-CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-T
T ss_pred --C-CCcCeEEec------cceEEEEEecCCCcHHH-cchhhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-C
Confidence 4 666665522 23599999999999999 43 2234578999999999998 999999999999999 9
Q ss_pred CceEEeccccccccccccCCCCCccccceeccccccccccccCC
Q 002376 779 MTAKVGDFGLARFLLERVDNQSSISSTHVFMGSIGYVPPEYGLG 822 (929)
Q Consensus 779 ~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 822 (929)
+.+||+|||+|+. +..|+|||++.+
T Consensus 229 ~~vkl~DFG~a~~-------------------~~~~~a~e~l~r 253 (282)
T 1zar_A 229 EGIWIIDFPQSVE-------------------VGEEGWREILER 253 (282)
T ss_dssp TEEEECCCTTCEE-------------------TTSTTHHHHHHH
T ss_pred CcEEEEECCCCeE-------------------CCCCCHHHHHHH
Confidence 9999999999863 345889998743
No 368
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=3.2e-18 Score=177.85 Aligned_cols=153 Identities=22% Similarity=0.211 Sum_probs=70.3
Q ss_pred ccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccC
Q 002376 355 LSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSG 434 (929)
Q Consensus 355 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 434 (929)
.+.++.+++.++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|+...+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 445555555554 2333222 4455555555555544444444444444444444444433333444444444444444
Q ss_pred cccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeeccc
Q 002376 435 NELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAY 514 (929)
Q Consensus 435 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~ 514 (929)
|+|++..+..|..+++ |++|+|++|+++ .+|..+..+++|+.|+|++
T Consensus 98 N~l~~l~~~~~~~l~~--------------------------------L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~ 144 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVH--------------------------------LKELFMCCNKLT-ELPRGIERLTHLTHLALDQ 144 (229)
T ss_dssp SCCCCCCTTTTTTCTT--------------------------------CCEEECCSSCCC-SCCTTGGGCTTCSEEECCS
T ss_pred CcCCccChhHhCcchh--------------------------------hCeEeccCCccc-ccCcccccCCCCCEEECCC
Confidence 4444333333333333 333333333333 3344444444455555555
Q ss_pred ccccccCCccccCCCCCCEEECCCCcCCC
Q 002376 515 NQFSGPIPNIVAELKGLEVLDLSSNKLSG 543 (929)
Q Consensus 515 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 543 (929)
|+|++..+..|..+++|+.|+|++|.+.+
T Consensus 145 N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 145 NQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 55544444445555555555555555543
No 369
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=5.7e-21 Score=224.76 Aligned_cols=170 Identities=19% Similarity=0.206 Sum_probs=100.4
Q ss_pred CCCcccccccccEEeccCcc-------------CcCCccCCCCCCCccceec-cccccccCCCCCCCCccccccCCCCCC
Q 002376 265 IPGSLHNLTNIQIIRMTHNL-------------LEGTLPPGLGNLPFLRTYN-IGFNKIVSSGDDEGLSFITSLTNSTHL 330 (929)
Q Consensus 265 ~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~i~~~~~~~~~~~~~~~~~l~~L 330 (929)
+|..++++++|+.|++++|. +.+..|..++++++|+.|+ ++.|.+. +|
T Consensus 364 Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~------------------~L 425 (567)
T 1dce_A 364 LQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD------------------DL 425 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH------------------HH
T ss_pred hHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc------------------hh
Confidence 34444445555555554443 4445555666666666666 4555431 23
Q ss_pred CEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecC
Q 002376 331 NYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAG 410 (929)
Q Consensus 331 ~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 410 (929)
..+.+++|.++.. |. ..|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..++.+++|++|+|++
T Consensus 426 ~~l~l~~n~i~~l-~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~ 495 (567)
T 1dce_A 426 RSKFLLENSVLKM-EY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASD 495 (567)
T ss_dssp HHHHHHHHHHHHH-HH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCS
T ss_pred hhhhhhccccccc-Cc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCC
Confidence 3344555555421 11 136666666666665 344 666667777777777766 5566666667777777777
Q ss_pred CcCCCCCcccccCCCCCceecccCccccccc-CcccccccccceecccCCcCCCC
Q 002376 411 NEIPGGIPNSLANLKKLNQIDLSGNELTGEI-PISFGNFQSLLSIDLSNNRINGN 464 (929)
Q Consensus 411 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~g~ 464 (929)
|+|++ +| .+.++++|+.|+|++|+|++.. |..|+.+++|+.|+|++|+|++.
T Consensus 496 N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 496 NALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp SCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred CCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCC
Confidence 76665 45 5666666667777666666654 66666666666666666666643
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=7.6e-19 Score=186.60 Aligned_cols=167 Identities=22% Similarity=0.273 Sum_probs=92.3
Q ss_pred cccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceeccc
Q 002376 354 ELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLS 433 (929)
Q Consensus 354 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 433 (929)
++..+++++|.+++.. .+..+++|++|++++|.++. +| .+..+++|++|+|++|+|++..+ +.++++|++|+|+
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECC
Confidence 4555666666665433 45566666666666666653 33 45666666666666666665433 6666666666666
Q ss_pred CcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecc
Q 002376 434 GNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMA 513 (929)
Q Consensus 434 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls 513 (929)
+|++++. |.. .. ++|+.|+|++|++++ + +.+..+++|+.|||++|++++. | .+..+++|+.|+|+
T Consensus 94 ~N~l~~l-~~~-~~-~~L~~L~L~~N~l~~-~---------~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~ 158 (263)
T 1xeu_A 94 RNRLKNL-NGI-PS-ACLSRLFLDNNELRD-T---------DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLH 158 (263)
T ss_dssp SSCCSCC-TTC-CC-SSCCEEECCSSCCSB-S---------GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECT
T ss_pred CCccCCc-Ccc-cc-CcccEEEccCCccCC-C---------hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECC
Confidence 6666542 221 11 556666666666553 1 1344555555555555555543 2 45555555555555
Q ss_pred cccccccCCccccCCCCCCEEECCCCcCCC
Q 002376 514 YNQFSGPIPNIVAELKGLEVLDLSSNKLSG 543 (929)
Q Consensus 514 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 543 (929)
+|+|++. ..+..+++|+.|++++|++++
T Consensus 159 ~N~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 159 GNEITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp TSCCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred CCcCcch--HHhccCCCCCEEeCCCCcccC
Confidence 5555544 345555555555555555553
No 371
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=8e-18 Score=170.54 Aligned_cols=154 Identities=20% Similarity=0.312 Sum_probs=91.2
Q ss_pred CCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccce
Q 002376 374 GRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLS 453 (929)
Q Consensus 374 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 453 (929)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|++++..|..|..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 44556666666666665 334 46666666666666665542 235666677777777777776666666666777777
Q ss_pred ecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCE
Q 002376 454 IDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEV 533 (929)
Q Consensus 454 L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 533 (929)
|++++|++++.. |..+..+++|++|+|++|++.+.+| .+..+++|+.|++++|++++. + .+..+++|+.
T Consensus 117 L~Ls~n~i~~~~--------~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~ 185 (197)
T 4ezg_A 117 LDISHSAHDDSI--------LTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQ 185 (197)
T ss_dssp EECCSSBCBGGG--------HHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCE
T ss_pred EEecCCccCcHh--------HHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCE
Confidence 777777665432 4556666666666666665222344 455666666666666666542 2 4555566666
Q ss_pred EECCCCcCC
Q 002376 534 LDLSSNKLS 542 (929)
Q Consensus 534 L~Ls~N~l~ 542 (929)
|++++|++.
T Consensus 186 L~l~~N~i~ 194 (197)
T 4ezg_A 186 LYAFSQTIG 194 (197)
T ss_dssp EEECBC---
T ss_pred EEeeCcccC
Confidence 666666554
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=1.2e-18 Score=185.07 Aligned_cols=182 Identities=25% Similarity=0.430 Sum_probs=91.6
Q ss_pred CccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCC
Q 002376 185 PPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGK 264 (929)
Q Consensus 185 p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~ 264 (929)
|..|..+.|.. .+.++..+++++|.+++.. .+..+++|++|++++|+++ .+|
T Consensus 6 p~~i~~~~pd~--~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~----------------------- 57 (263)
T 1xeu_A 6 PTPINQVFPDP--GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA----------------------- 57 (263)
T ss_dssp CEEHHHHCCSH--HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-----------------------
T ss_pred CCCHHHhCCCH--HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-----------------------
Confidence 33444444443 4566666777777776543 4666777777777777665 233
Q ss_pred CCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCcccccc
Q 002376 265 IPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKI 344 (929)
Q Consensus 265 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 344 (929)
.+..+++|+.|+|++|+|++..+ +..+++|+.|++++|++..++. +.. ++
T Consensus 58 ---~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~l~~---------~~~-~~--------------- 107 (263)
T 1xeu_A 58 ---GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKNLNG---------IPS-AC--------------- 107 (263)
T ss_dssp ---TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSCCTT---------CCC-SS---------------
T ss_pred ---HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCCcCc---------ccc-Cc---------------
Confidence 23344455555555555553322 4444444444444444332211 111 33
Q ss_pred CchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCC
Q 002376 345 PESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANL 424 (929)
Q Consensus 345 p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 424 (929)
|+.|+|++|+|++. ..+..+++|++|+|++|++++. + .+..+++|++|+|++|++++. ..+..+
T Consensus 108 ----------L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l 171 (263)
T 1xeu_A 108 ----------LSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRL 171 (263)
T ss_dssp ----------CCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTC
T ss_pred ----------ccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccC
Confidence 44444444444332 1244455555555555555533 2 355555555555555555543 445555
Q ss_pred CCCceecccCcccccc
Q 002376 425 KKLNQIDLSGNELTGE 440 (929)
Q Consensus 425 ~~L~~L~Ls~N~l~~~ 440 (929)
++|+.|++++|.+++.
T Consensus 172 ~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 172 KKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CCCCEEEEEEEEEECC
T ss_pred CCCCEEeCCCCcccCC
Confidence 5566666666655543
No 373
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=1e-17 Score=168.93 Aligned_cols=155 Identities=21% Similarity=0.271 Sum_probs=87.5
Q ss_pred CCceecccCcccccccCc-ccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcC
Q 002376 426 KLNQIDLSGNELTGEIPI-SFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNC 504 (929)
Q Consensus 426 ~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l 504 (929)
+|++|+|++|++++..+. .|..+++|++|+|++|+|++.. |..+..+++|++|+|++|++++..|..|.++
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 101 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIE--------PNAFEGASHIQELQLGENKIKEISNKMFLGL 101 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBC--------TTTTTTCTTCCEEECCSCCCCEECSSSSTTC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcC--------HhHcCCcccCCEEECCCCcCCccCHHHhcCC
Confidence 455555555555544332 2555555555555555555432 3445555566666666666666666666777
Q ss_pred cCcceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCc-ccccCCCCCeEeCCCCcCcccCCCCCCCCCCCcccc
Q 002376 505 KSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPS-DLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVHL 583 (929)
Q Consensus 505 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l 583 (929)
++|++|+|++|+|++.+|..|..+++|++|+|++|.+++..+- ++. ..++...+..+...+..|.. ++.....++
T Consensus 102 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~--~~l~~~~~~~~~~~C~~P~~--l~~~~l~~l 177 (192)
T 1w8a_A 102 HQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFA--EWLRKKSLNGGAARCGAPSK--VRDVQIKDL 177 (192)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHH--HHHHHHCCSGGGCBBCSSTT--TTTSBGGGS
T ss_pred CCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHH--HHHHHcCCCCCCCCCCCChH--HcCCChhhC
Confidence 7777777777777777777777777777777777777765442 111 11222234444444444432 344444556
Q ss_pred cCCCCCcCC
Q 002376 584 KGNPKLCLQ 592 (929)
Q Consensus 584 ~~N~~~c~~ 592 (929)
..+...|..
T Consensus 178 ~~~~~~C~~ 186 (192)
T 1w8a_A 178 PHSEFKCSS 186 (192)
T ss_dssp CTTTCCCCC
T ss_pred cHhhcCcCC
Confidence 666666643
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=4e-18 Score=171.90 Aligned_cols=156 Identities=24% Similarity=0.351 Sum_probs=127.3
Q ss_pred ceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCc
Q 002376 428 NQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSL 507 (929)
Q Consensus 428 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L 507 (929)
+.+++++|+++ .+|..+.. +|+.|+|++|+|++..+. ..+..+++|++|+|++|++++..|..|.++++|
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~-------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 80 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSD-------GLFGRLPHLVKLELKRNQLTGIEPNAFEGASHI 80 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCS-------CSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTC
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCc-------cccccCCCCCEEECCCCCCCCcCHhHcCCcccC
Confidence 78899999996 56765543 899999999999854311 237888999999999999999999999999999
Q ss_pred ceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCCCCCCCCCCCcccccCCC
Q 002376 508 EELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVPSEGIFRNMSNVHLKGNP 587 (929)
Q Consensus 508 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~N~ 587 (929)
++|+|++|+|++..|..|..+++|++|+|++|+|++.+|..+..+++|++|+|++|++++..+.......+....+.++.
T Consensus 81 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~ 160 (192)
T 1w8a_A 81 QELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGA 160 (192)
T ss_dssp CEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGG
T ss_pred CEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999876532211112223344554
Q ss_pred CCcCCC
Q 002376 588 KLCLQL 593 (929)
Q Consensus 588 ~~c~~~ 593 (929)
..|..|
T Consensus 161 ~~C~~P 166 (192)
T 1w8a_A 161 ARCGAP 166 (192)
T ss_dssp CBBCSS
T ss_pred CCCCCC
Confidence 455443
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=2.9e-17 Score=166.38 Aligned_cols=150 Identities=18% Similarity=0.281 Sum_probs=100.2
Q ss_pred cccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceeccc
Q 002376 354 ELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLS 433 (929)
Q Consensus 354 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 433 (929)
+|+.|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|++++..+..+..+++|++|+|+
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 5666777776666 334 46666777777777775542 3356667777777777777776666667777777777777
Q ss_pred CcccccccCcccccccccceecccCCc-CCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeec
Q 002376 434 GNELTGEIPISFGNFQSLLSIDLSNNR-INGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLM 512 (929)
Q Consensus 434 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~L 512 (929)
+|++++..|..|..+++|+.|++++|+ ++ .+ | .+..+++|+.|++++|++++ ++ .+..+++|+.|++
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~--------~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l 188 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNGAIT-DI--------M-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYA 188 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CC--------G-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEE
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCCCcc-cc--------H-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEe
Confidence 777776666667777777777777776 43 22 3 46667777777777777775 33 6777788888888
Q ss_pred ccccccc
Q 002376 513 AYNQFSG 519 (929)
Q Consensus 513 s~N~l~~ 519 (929)
++|+|.+
T Consensus 189 ~~N~i~~ 195 (197)
T 4ezg_A 189 FSQTIGG 195 (197)
T ss_dssp CBC----
T ss_pred eCcccCC
Confidence 8887753
No 376
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=1.5e-17 Score=183.01 Aligned_cols=125 Identities=15% Similarity=0.108 Sum_probs=86.1
Q ss_pred CCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCC-EE
Q 002376 328 THLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQ-VL 406 (929)
Q Consensus 328 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L 406 (929)
.+++.+.+.++-.. .....+.....+|+.++|++|+++...+.+|.++++|+.|+|++| ++...+..|.++++|+ .+
T Consensus 202 ~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l 279 (329)
T 3sb4_A 202 RDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTL 279 (329)
T ss_dssp GGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred cccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEE
Confidence 44555555554222 111222222236888888888887777777888888888888877 6666667778888887 88
Q ss_pred EecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceec
Q 002376 407 GLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSID 455 (929)
Q Consensus 407 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 455 (929)
++.+ .++...+.+|.++++|+.|++++|+++.+.+.+|.++++|+.|+
T Consensus 280 ~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 280 ELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 8877 66666667788888888888877887776677777777777765
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=5.2e-18 Score=186.76 Aligned_cols=294 Identities=15% Similarity=0.122 Sum_probs=168.8
Q ss_pred cccCCCCCC--CCCCCEEEeecCCCCCCCCcCCCC-CCCCcEEeCCCCCCC--CCcccccccccccceecccccccCCCC
Q 002376 85 GTISPHIGN--LSFLRSIQLQNNKLSGNLPREIGN-LFRLRVLNISFNNLQ--GELPVNISKLTELKMLDLMANKITGRV 159 (929)
Q Consensus 85 g~i~~~l~~--L~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~i 159 (929)
|.++..+.. +.+++.|.++++ +.+..-..+.. +++|++|||++|+|. ...+. .++.++.+++..|. |
T Consensus 13 g~l~~~l~~~~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~----I 84 (329)
T 3sb4_A 13 GTLISMMTEEEANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANF----V 84 (329)
T ss_dssp TCGGGGSCHHHHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTE----E
T ss_pred CcHHhhccchhhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccc---cccccccccccccc----c
Confidence 344444443 667777777754 11111112222 677788888888777 22222 22224555555553 4
Q ss_pred Chhhhcc--------CCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEe
Q 002376 160 TDDQLRN--------LRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRL 231 (929)
Q Consensus 160 ~~~~~~~--------l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 231 (929)
|+.+|.+ +++|+.|+|.+ .+ ..+.+.+|.++++|+.|+|++|.+..+.+.+|.++.++..+.+
T Consensus 85 ~~~aF~~~~~~~~~g~~~L~~l~L~~-~i--------~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~ 155 (329)
T 3sb4_A 85 PAYAFSNVVNGVTKGKQTLEKVILSE-KI--------KNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPL 155 (329)
T ss_dssp CTTTTEEEETTEEEECTTCCC-CBCT-TC--------CEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECT
T ss_pred CHHHhcccccccccccCCCcEEECCc-cc--------cchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecC
Confidence 5566777 77777777766 33 3344566777777777777777777777777777776666665
Q ss_pred eecCC---CCcCCcccccCCCCcc-eeeccCCcCCCCCCCcc----cccccccEEeccCccCcCCccCCCCCCCccceec
Q 002376 232 ASNQL---GGEIPYDVRDTLPNLL-DFIYCFNRFTGKIPGSL----HNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYN 303 (929)
Q Consensus 232 s~N~l---~~~ip~~~~~~l~~L~-~l~l~~N~l~~~~p~~~----~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 303 (929)
..+.. ...+....+..+..|+ .+.+... +.++..+ ....+++.+.+.++-...........+++|+.++
T Consensus 156 ~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~---~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~ 232 (329)
T 3sb4_A 156 GSSDAYRFKNRWEHFAFIEGEPLETTIQVGAM---GKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLD 232 (329)
T ss_dssp TCTHHHHTSTTTTTSCEEESCCCEEEEEECTT---CCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEE
T ss_pred cchhhhhccccccccccccccccceeEEecCC---CcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEE
Confidence 55221 0112222233344444 2222211 1111111 1234455555544322111111111256666666
Q ss_pred cccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhhhcccccc-EEEecCCccccccCCCCCCCCcccEE
Q 002376 304 IGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIGNFSNELS-KLYLGGNHIYGKIPASIGRLRSLTLL 382 (929)
Q Consensus 304 L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L 382 (929)
+++|++..++. .+|.++++|+.|+|.+| ++..-+..|..+. +|+ .+++.+ .++...+.+|.++++|+.+
T Consensus 233 L~~n~i~~I~~-------~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~-~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 233 ISKTNATTIPD-------FTFAQKKYLLKIKLPHN-LKTIGQRVFSNCG-RLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTBCCCEECT-------TTTTTCTTCCEEECCTT-CCEECTTTTTTCT-TCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred CCCCCcceecH-------hhhhCCCCCCEEECCcc-cceehHHHhhCCh-hccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 66666666554 35677777777777776 6533334455554 688 888887 6776777888889999999
Q ss_pred EeeCCCCCcccCccccCCCCCCEEEe
Q 002376 383 DLSYNSISGEIPIEIGQLQGLQVLGL 408 (929)
Q Consensus 383 ~Ls~N~l~~~~p~~~~~l~~L~~L~L 408 (929)
+++.|+++...+..|.++++|+.++.
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EeCCCccCccchhhhcCCcchhhhcc
Confidence 99888888777778888888888763
No 378
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=2.8e-16 Score=154.66 Aligned_cols=85 Identities=20% Similarity=0.185 Sum_probs=33.7
Q ss_pred CccEEEecCCCCCCCCCcchhcCcCcceeecccccccccC-CccccCCCCCCEEECCCCcCCCcCC---cccccCCCCCe
Q 002376 482 NVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPI-PNIVAELKGLEVLDLSSNKLSGSIP---SDLQNLQALRS 557 (929)
Q Consensus 482 ~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~ 557 (929)
+|++|+|++|++++.+|..+.++++|++|+|++|+|++.. +..+..+++|+.|++++|++++..+ ..+..+++|++
T Consensus 72 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~ 151 (168)
T 2ell_A 72 KLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTY 151 (168)
T ss_dssp SCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCE
T ss_pred CCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcE
Confidence 3333333333333333333333444444444444443321 1334444444444444444443222 23444444444
Q ss_pred EeCCCCcCc
Q 002376 558 LNLTFNNLE 566 (929)
Q Consensus 558 L~Ls~N~l~ 566 (929)
|++++|.+.
T Consensus 152 L~l~~n~~~ 160 (168)
T 2ell_A 152 LDGYDREDQ 160 (168)
T ss_dssp ETTEETTSC
T ss_pred ecCCCCChh
Confidence 444444443
No 379
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=6.9e-16 Score=151.86 Aligned_cols=132 Identities=26% Similarity=0.284 Sum_probs=80.5
Q ss_pred CCCCEEEccCCccc-cccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEE
Q 002376 328 THLNYLALDGNQFE-GKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVL 406 (929)
Q Consensus 328 ~~L~~L~Ls~N~l~-~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 406 (929)
++|++|+|++|+++ +.+|..+..+. +|++|+|++|.|++. ..+..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~-~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFV-NLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGG-GCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCC-CCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 56666666666665 55666555554 566666666666654 556666666666666666665556555556666666
Q ss_pred EecCCcCCCCCc-ccccCCCCCceecccCcccccccC---cccccccccceecccCCcCC
Q 002376 407 GLAGNEIPGGIP-NSLANLKKLNQIDLSGNELTGEIP---ISFGNFQSLLSIDLSNNRIN 462 (929)
Q Consensus 407 ~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~ 462 (929)
+|++|++++..+ ..+..+++|++|++++|.+++..+ ..|..+++|+.|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 666666664322 556666666666666666664333 24555666666666666553
No 380
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=1e-15 Score=152.07 Aligned_cols=109 Identities=28% Similarity=0.372 Sum_probs=74.8
Q ss_pred CCCCCCcceeeCCCCCcEEEEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCc
Q 002376 56 SSPCTWPGVICNNFGNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGEL 135 (929)
Q Consensus 56 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 135 (929)
...|+|.++.|+.. +++ .+|..+. ++|++|+|++|++++..+..|+.+++|++|+|++|+|++..
T Consensus 4 ~C~C~~~~l~~~~~------------~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 68 (177)
T 2o6r_A 4 RCSCSGTEIRCNSK------------GLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLP 68 (177)
T ss_dssp TCEEETTEEECCSS------------CCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCC
T ss_pred CCEeCCCEEEecCC------------CCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeC
Confidence 34578888888653 233 3454433 67888888888888666667788888888888888888666
Q ss_pred ccccccccccceecccccccCCCCChhhhccCCCCcEEEcccccc
Q 002376 136 PVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLL 180 (929)
Q Consensus 136 p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l 180 (929)
+..|..+++|++|+|++|+|+ .+++..|.++++|++|+|++|++
T Consensus 69 ~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l 112 (177)
T 2o6r_A 69 DGVFDKLTKLTILYLHENKLQ-SLPNGVFDKLTQLKELALDTNQL 112 (177)
T ss_dssp TTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCC
T ss_pred hhHccCCCccCEEECCCCCcc-ccCHHHhhCCcccCEEECcCCcc
Confidence 666777777777777777777 35554456666666666666655
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=1e-15 Score=154.14 Aligned_cols=128 Identities=27% Similarity=0.381 Sum_probs=79.9
Q ss_pred ceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCc
Q 002376 428 NQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSL 507 (929)
Q Consensus 428 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L 507 (929)
+.+++++|.++ .+|..+. ++|+.|+|++|+|+ .+ |..+..+++|+.|||++|++++..|..|.++++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~i--------p~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L 80 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LV--------PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQL 80 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SC--------CGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hh--------HHHhhcccCCCEEECCCCcCCEeCHhHccCCCCC
Confidence 45566666665 3444332 35666666666664 22 4455666666666666666666666666667777
Q ss_pred ceeecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcc
Q 002376 508 EELLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEG 567 (929)
Q Consensus 508 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 567 (929)
++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++.+
T Consensus 81 ~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 81 LTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 777777777776666666677777777777777765555556666666666666666553
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=4.3e-16 Score=149.99 Aligned_cols=81 Identities=23% Similarity=0.305 Sum_probs=37.3
Q ss_pred cCccEEEecCCCCCCCCCcchhcCcCcceeeccccccccc-CCccccCCCCCCEEECCCCcCCCcCC---cccccCCCCC
Q 002376 481 ENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGP-IPNIVAELKGLEVLDLSSNKLSGSIP---SDLQNLQALR 556 (929)
Q Consensus 481 ~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~ 556 (929)
++|++|+|++|.+++.+|..+..+++|++|++++|++++. .+..++.+++|++|++++|++++..+ ..+..+++|+
T Consensus 64 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~ 143 (149)
T 2je0_A 64 NKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLT 143 (149)
T ss_dssp TTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCC
T ss_pred CCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcc
Confidence 3344444444444433444444444444444444444432 22444555555555555555554333 3445555555
Q ss_pred eEeCC
Q 002376 557 SLNLT 561 (929)
Q Consensus 557 ~L~Ls 561 (929)
.||++
T Consensus 144 ~L~l~ 148 (149)
T 2je0_A 144 YLDGY 148 (149)
T ss_dssp EETTB
T ss_pred cccCC
Confidence 55544
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=4.7e-16 Score=149.72 Aligned_cols=130 Identities=19% Similarity=0.240 Sum_probs=113.8
Q ss_pred CCCCCCEEEecCCcCC-CCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhh
Q 002376 399 QLQGLQVLGLAGNEIP-GGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEI 477 (929)
Q Consensus 399 ~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~ 477 (929)
..++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..|.++++|++|++++|++++.+ |..+
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~--------~~~~ 84 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGL--------EVLA 84 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCT--------HHHH
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchH--------HHHh
Confidence 3478999999999998 78888889999999999999999876 77889999999999999998644 7778
Q ss_pred hcccCccEEEecCCCCCCC-CCcchhcCcCcceeecccccccccCC---ccccCCCCCCEEECCC
Q 002376 478 SRLENVVTIDLSDNSLSGN-LPNSLKNCKSLEELLMAYNQFSGPIP---NIVAELKGLEVLDLSS 538 (929)
Q Consensus 478 ~~l~~L~~LdLs~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~ 538 (929)
..+++|++|++++|++++. .|..++.+++|++|++++|++++..+ ..+..+++|+.||+++
T Consensus 85 ~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 85 EKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp HHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred hhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 8899999999999999874 34789999999999999999998776 6789999999999874
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=2e-15 Score=152.00 Aligned_cols=125 Identities=22% Similarity=0.346 Sum_probs=67.0
Q ss_pred EEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceeccccccc
Q 002376 76 LNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKI 155 (929)
Q Consensus 76 l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 155 (929)
+++++++++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 344444444 4454432 35556666666555 4555555555555555555555555555555555555555555555
Q ss_pred CCCCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecC
Q 002376 156 TGRVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQ 235 (929)
Q Consensus 156 ~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 235 (929)
+ .+++..| .++++|++|+|++|+|+...+..|..+++|++|+|++|.
T Consensus 91 ~-~i~~~~f--------------------------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 137 (193)
T 2wfh_A 91 R-CIPPRTF--------------------------------DGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANP 137 (193)
T ss_dssp C-BCCTTTT--------------------------------TTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSC
T ss_pred C-EeCHHHh--------------------------------CCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCC
Confidence 4 2333334 445555555555555554444555566666666666665
Q ss_pred CC
Q 002376 236 LG 237 (929)
Q Consensus 236 l~ 237 (929)
+.
T Consensus 138 ~~ 139 (193)
T 2wfh_A 138 LY 139 (193)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 385
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.60 E-value=1.4e-14 Score=162.93 Aligned_cols=129 Identities=12% Similarity=0.123 Sum_probs=70.4
Q ss_pred cccEEEecCCccccccCCCCCCCCcccEEEeeCCCCC-----cccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCc
Q 002376 354 ELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSIS-----GEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLN 428 (929)
Q Consensus 354 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 428 (929)
+|+.+.+ .|.++...+.+|.++++|+.+++.+|.+. ...+..|.++++|+.+++. |.++.....+|.++++|+
T Consensus 249 ~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~ 326 (401)
T 4fdw_A 249 GITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVT 326 (401)
T ss_dssp CCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCC
T ss_pred CccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCcc
Confidence 4555555 33344444556666666666666665543 2344556666666666666 335545555666666666
Q ss_pred eecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCC
Q 002376 429 QIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSL 493 (929)
Q Consensus 429 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l 493 (929)
.++|..| ++.+.+.+|.++ +|+.+++++|.+. .++.+.+..+| .+++.|++..|.+
T Consensus 327 ~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~-~l~~~~F~~~~------~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 327 QLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPP-QVFEKVWYGFP------DDITVIRVPAESV 382 (401)
T ss_dssp EEEECTT-CCEECTTSSSSS-CCCEEEECCSSCC-BCCCSSCCCSC------TTCCEEEECGGGH
T ss_pred EEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCc-ccccccccCCC------CCccEEEeCHHHH
Confidence 6666443 554555566666 6666666666554 23332222222 2455666655543
No 386
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.59 E-value=2.5e-14 Score=160.88 Aligned_cols=266 Identities=12% Similarity=0.120 Sum_probs=202.1
Q ss_pred CCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhccCCCCcEE
Q 002376 94 LSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVL 173 (929)
Q Consensus 94 L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L 173 (929)
...++.+.+.+ .++..-..+|.+. +|+.++|..| ++.+-...|.+. +|+.++|.. .++ .|+..+|.++++|+.+
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l 185 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLE-QLKEDIFYYCYNLKKA 185 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCC-EECSSTTTTCTTCCEE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-Ccc-EehHHHhhCcccCCee
Confidence 36677777754 4555566777775 7888888766 665666677774 688888875 665 6777788888888888
Q ss_pred EccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcce
Q 002376 174 NFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLD 253 (929)
Q Consensus 174 ~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~ 253 (929)
+|++|+++ .+....|. ..+|+.+.|.. .++.+...+|.++++|+.+++..| ++ .|+...|.. .+|+.
T Consensus 186 ~l~~n~l~--------~I~~~aF~-~~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~-~I~~~aF~~-~~L~~ 252 (401)
T 4fdw_A 186 DLSKTKIT--------KLPASTFV-YAGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VS-TIGQEAFRE-SGITT 252 (401)
T ss_dssp ECTTSCCS--------EECTTTTT-TCCCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CC-EECTTTTTT-CCCSE
T ss_pred ecCCCcce--------EechhhEe-ecccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-cc-Ccccccccc-CCccE
Confidence 88888653 33344565 47888888874 477778888888888999988875 54 677777775 78888
Q ss_pred eeccCCcCCCCCCCcccccccccEEeccCccCc-----CCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCC
Q 002376 254 FIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLE-----GTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNST 328 (929)
Q Consensus 254 l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~ 328 (929)
+.+ .|+++..-+..|.++++|+.+++.+|.+. .+.+.+|.++++|+.+++. +.+..++. .+|.+++
T Consensus 253 i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~-------~aF~~c~ 323 (401)
T 4fdw_A 253 VKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQ-------GLLGGNR 323 (401)
T ss_dssp EEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECT-------TTTTTCC
T ss_pred EEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhh-------hhhcCCC
Confidence 888 56677777788899999999999888775 4556789999999999998 45766655 4788899
Q ss_pred CCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCC-cccEEEeeCCCCC
Q 002376 329 HLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLR-SLTLLDLSYNSIS 390 (929)
Q Consensus 329 ~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~ 390 (929)
+|+.++|..| ++..-+..|..+ +|+.+++++|.+....+..|.+++ +++.|++..+.+.
T Consensus 324 ~L~~l~lp~~-l~~I~~~aF~~~--~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 324 KVTQLTIPAN-VTQINFSAFNNT--GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp SCCEEEECTT-CCEECTTSSSSS--CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred CccEEEECcc-ccEEcHHhCCCC--CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 9999999655 663444455554 699999999999888888888884 7899999887754
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=3.9e-15 Score=147.80 Aligned_cols=131 Identities=22% Similarity=0.233 Sum_probs=85.4
Q ss_pred CCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEec
Q 002376 330 LNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLA 409 (929)
Q Consensus 330 L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 409 (929)
.+.+++++|+++ .+|..+. .+|+.|++++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEecCCCCc-cCCCCCC---CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 356666777666 4554332 357777777777776666666777777777777777776555556667777777777
Q ss_pred CCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCC
Q 002376 410 GNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGN 464 (929)
Q Consensus 410 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 464 (929)
+|+|++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++.
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 7777666666666666777777777776655555556666666666666666543
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=5e-17 Score=164.82 Aligned_cols=132 Identities=23% Similarity=0.308 Sum_probs=84.8
Q ss_pred cccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCc
Q 002376 420 SLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPN 499 (929)
Q Consensus 420 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~ 499 (929)
.+..+++|++|+|++|++++ +| .+.++++|+.|++++|+++ .+ |..+..+++|++|+|++|++++ +|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l--------~~~~~~~~~L~~L~L~~N~l~~-l~- 109 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KI--------ENLDAVADTLEELWISYNQIAS-LS- 109 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SC--------SSHHHHHHHCSEEEEEEEECCC-HH-
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cc--------cchhhcCCcCCEEECcCCcCCc-CC-
Confidence 56666666666666666664 44 5666666666666666665 22 4455555667777777777765 34
Q ss_pred chhcCcCcceeecccccccccCC-ccccCCCCCCEEECCCCcCCCcCCcc----------cccCCCCCeEeCCCCcCc
Q 002376 500 SLKNCKSLEELLMAYNQFSGPIP-NIVAELKGLEVLDLSSNKLSGSIPSD----------LQNLQALRSLNLTFNNLE 566 (929)
Q Consensus 500 ~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~----------~~~l~~L~~L~Ls~N~l~ 566 (929)
.+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++.+|.. +..+++|+.|| +|.++
T Consensus 110 ~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 110 GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 56667777777777777765332 45677777777777777776655542 66777777776 45544
No 389
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.54 E-value=2.1e-13 Score=153.76 Aligned_cols=311 Identities=13% Similarity=0.056 Sum_probs=159.3
Q ss_pred CCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhccCCC
Q 002376 90 HIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRS 169 (929)
Q Consensus 90 ~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~ 169 (929)
+|.++++|+.+.|.. .++..-..+|.++++|+.++|..+ ++.+-...|.++++|+.+.+..+ ++ .+...+|.++..
T Consensus 66 AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~-~i~~~aF~~~~~ 141 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LK-SIGVEAFKGCDF 141 (394)
T ss_dssp TTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CC-EECTTTTTTCCC
T ss_pred HhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-ee-eecceeeecccc
Confidence 455666666666653 355444556666666666666543 44344455666666666665543 22 344455555543
Q ss_pred CcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCC
Q 002376 170 LQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLP 249 (929)
Q Consensus 170 L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~ 249 (929)
++...... +..+....|.++++|+.+.+..+ +..+....|.++++|+.+++..| ++ .++...+....
T Consensus 142 ~~~~~~~~----------~~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~-~I~~~~F~~~~ 208 (394)
T 4fs7_A 142 KEITIPEG----------VTVIGDEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LK-IIRDYCFAECI 208 (394)
T ss_dssp SEEECCTT----------CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CC-EECTTTTTTCT
T ss_pred cccccCcc----------ccccchhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ce-EeCchhhcccc
Confidence 33322221 12223345666666666666543 33355556666666666666554 32 34444444444
Q ss_pred CcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCC
Q 002376 250 NLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTH 329 (929)
Q Consensus 250 ~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~ 329 (929)
.|+.+.+..+... +...+...++|+.+.+..+ ++..-.. .+.++..
T Consensus 209 ~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~-------------------------------~f~~~~~ 254 (394)
T 4fs7_A 209 LLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKS-------------------------------VFYGCTD 254 (394)
T ss_dssp TCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSS-------------------------------TTTTCSS
T ss_pred ccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccc-------------------------------ccccccc
Confidence 5544444333211 1222222334444443322 1112222 3444555
Q ss_pred CCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEec
Q 002376 330 LNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLA 409 (929)
Q Consensus 330 L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 409 (929)
|+.+.+..+... .....+.... .++.+....+.+ ....|..+.+|+.+.+..+ ++..-..+|.++.+|+.+++.
T Consensus 255 l~~~~~~~~~~~-i~~~~F~~~~-~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp 328 (394)
T 4fs7_A 255 LESISIQNNKLR-IGGSLFYNCS-GLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLP 328 (394)
T ss_dssp CCEEEECCTTCE-ECSCTTTTCT-TCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCC
T ss_pred ceeEEcCCCcce-eecccccccc-ccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeC
Confidence 555555544332 2222333332 455555555432 2345666666666666544 444445566666667666665
Q ss_pred CCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCC
Q 002376 410 GNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNN 459 (929)
Q Consensus 410 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 459 (929)
.+ ++..-..+|.++++|+.+++..| ++.+-..+|.++.+|+.+++..+
T Consensus 329 ~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 329 YL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred Cc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 43 54444566677777777777655 55455566777777777766544
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=3.3e-15 Score=148.26 Aligned_cols=136 Identities=21% Similarity=0.254 Sum_probs=99.9
Q ss_pred CCCCCCCCCCEEEeecCCCCCCCCcCCCCCC-CCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhccC
Q 002376 89 PHIGNLSFLRSIQLQNNKLSGNLPREIGNLF-RLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNL 167 (929)
Q Consensus 89 ~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l 167 (929)
+.+.++++|++|+|++|+++. +|. +..+. +|++|+|++|+|++. ..|..+++|++|+|++|+|+ .+|+..|..+
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l 87 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRIC-RIGEGLDQAL 87 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCC-EECSCHHHHC
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCccc-ccCcchhhcC
Confidence 345677788888888888874 454 44444 888888888888864 57888888888888888887 5666656888
Q ss_pred CCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCC----ccccCCCCceEEeeecCCC
Q 002376 168 RSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPS----TIYNMTSLVHLRLASNQLG 237 (929)
Q Consensus 168 ~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~ 237 (929)
++|++|+|++|++.. +|. ...+..+++|++|+|++|+++. .|. .+..+++|++||+++|.+.
T Consensus 88 ~~L~~L~L~~N~i~~-~~~------~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 88 PDLTELILTNNSLVE-LGD------LDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp TTCCEEECCSCCCCC-GGG------GGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCCEEECCCCcCCc-chh------hHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 888888888887732 221 0246677888888888888874 454 3778888888888888764
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.54 E-value=7.5e-17 Score=163.47 Aligned_cols=157 Identities=24% Similarity=0.304 Sum_probs=94.1
Q ss_pred cccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCceeccc
Q 002376 354 ELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLS 433 (929)
Q Consensus 354 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 433 (929)
.++.++++.|.++|..|. ++ .+|..+..+++|++|++++|++++ +| .+.++++|++|+++
T Consensus 19 ~l~~l~l~~~~l~~~~~~-----------------l~-~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~ 78 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPP-----------------IE-KMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLG 78 (198)
T ss_dssp CCCCTTCSEEECCBCCTT-----------------CC-CCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEE
T ss_pred cccCcchheeEeccccCc-----------------Hh-hhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECC
Confidence 566666666666655554 00 112245555555555555555554 34 55555566666666
Q ss_pred CcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCC-cchhcCcCcceeec
Q 002376 434 GNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLP-NSLKNCKSLEELLM 512 (929)
Q Consensus 434 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p-~~~~~l~~L~~L~L 512 (929)
+|+++ .+|..+..+++|+.|++++|++++ + | .+..+++|++|+|++|++++..+ ..+..+++|++|++
T Consensus 79 ~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l--------~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l 147 (198)
T 1ds9_A 79 RNLIK-KIENLDAVADTLEELWISYNQIAS-L--------S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLL 147 (198)
T ss_dssp EEEEC-SCSSHHHHHHHCSEEEEEEEECCC-H--------H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEE
T ss_pred CCCcc-cccchhhcCCcCCEEECcCCcCCc-C--------C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEe
Confidence 66665 345555555666666666666653 1 3 45666667777777777664322 35677777777777
Q ss_pred ccccccccCCc----------cccCCCCCCEEECCCCcCCC
Q 002376 513 AYNQFSGPIPN----------IVAELKGLEVLDLSSNKLSG 543 (929)
Q Consensus 513 s~N~l~~~~p~----------~~~~l~~L~~L~Ls~N~l~~ 543 (929)
++|.+++.+|. .+..+++|+.|| +|.++.
T Consensus 148 ~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 148 AGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp CSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred cCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 77777766554 277788888886 666653
No 392
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.53 E-value=3.6e-15 Score=157.67 Aligned_cols=116 Identities=20% Similarity=0.169 Sum_probs=88.7
Q ss_pred CCCceeecccCceeEEeccc--cCcH----------------------------------------HHHHHHHHHHHccC
Q 002376 663 FSHENLIGSGSFGSVLHNER--TGSW----------------------------------------KSFIAECETLRNVR 700 (929)
Q Consensus 663 ~~~~~~iG~G~~g~Vy~~~~--~~~~----------------------------------------~~~~~E~~~l~~l~ 700 (929)
|+..+.||+|+||.||+|.. .+.. ..+.+|+..+.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999876 1110 15778999999998
Q ss_pred Cccc--cceeeecccCCCCCcceEEEEEEecCC-C----Cccccccc-----cccccccHHHHHHHhh-hCCCCCEEecC
Q 002376 701 HRNL--VKLITSCSSLDSKNMEFLALVYEFLSN-G----SLGDWIHG-----ERKNELDITSALDYLH-NDCEVPVVHSD 767 (929)
Q Consensus 701 Hpni--v~l~~~~~~~~~~~~~~~~lV~e~~~~-g----sL~~~l~~-----~~~~~~~ia~aL~yLH-~~~~~~iiHrD 767 (929)
|+++ ...+++. ..++||||+.+ | +|.++... ...++.|++.||+||| +. +|+|||
T Consensus 129 ~~~i~~p~~~~~~---------~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---givHrD 196 (258)
T 1zth_A 129 EAGVSVPQPYTYM---------KNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEA---ELVHAD 196 (258)
T ss_dssp HTTCCCCCEEEEE---------TTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTS---CEECSS
T ss_pred hCCCCCCeEEEcC---------CCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHC---CEEeCC
Confidence 8864 3333321 25899999942 4 55554432 2344679999999999 77 999999
Q ss_pred CCCCCeeecCCCceEEecccccccc
Q 002376 768 LKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 768 lk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
|||+|||+++ .+||+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999754
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=1.6e-14 Score=143.22 Aligned_cols=134 Identities=21% Similarity=0.200 Sum_probs=105.1
Q ss_pred ccCCCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCC
Q 002376 323 SLTNSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQG 402 (929)
Q Consensus 323 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 402 (929)
.+.++.+|++|+|++|+++ .+|. +..+.++|+.|+|++|+|++. ..|..+++|++|+|++|+|++..+..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 4566788888999999888 4554 455544799999999999875 67888999999999999998665555688899
Q ss_pred CCEEEecCCcCCCCCcc--cccCCCCCceecccCcccccccCcc----cccccccceecccCCcCC
Q 002376 403 LQVLGLAGNEIPGGIPN--SLANLKKLNQIDLSGNELTGEIPIS----FGNFQSLLSIDLSNNRIN 462 (929)
Q Consensus 403 L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~ 462 (929)
|++|+|++|+|+ .+|. .+..+++|+.|++++|.++. +|.. +..+++|+.||+++|.+.
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 999999999986 4555 78888888888888888874 4553 777888888888888754
No 394
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.50 E-value=3.6e-13 Score=151.90 Aligned_cols=315 Identities=9% Similarity=0.008 Sum_probs=163.4
Q ss_pred ccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCCCCcc
Q 002376 190 NLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKIPGSL 269 (929)
Q Consensus 190 ~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~p~~~ 269 (929)
.+-..+|.++++|+.+.|.. .++.+...+|.++++|+.++|.++ ++ .|+...+..+.+|+.+.+..+ +...-...|
T Consensus 61 sIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF 136 (394)
T 4fs7_A 61 SIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VK-MIGRCTFSGCYALKSILLPLM-LKSIGVEAF 136 (394)
T ss_dssp EECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCCCCCCTT-CCEECTTTT
T ss_pred EhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ce-EccchhhcccccchhhcccCc-eeeecceee
Confidence 34556788888899888864 477777888888889998888755 44 566666666666666554432 333333444
Q ss_pred cccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccCchhh
Q 002376 270 HNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIPESIG 349 (929)
Q Consensus 270 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 349 (929)
.++..++....... ...-..+|.++++|+.+.+..+. ..++. ..|.++.+
T Consensus 137 ~~~~~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~-~~I~~-------~~F~~c~~-------------------- 186 (394)
T 4fs7_A 137 KGCDFKEITIPEGV--TVIGDEAFATCESLEYVSLPDSM-ETLHN-------GLFSGCGK-------------------- 186 (394)
T ss_dssp TTCCCSEEECCTTC--CEECTTTTTTCTTCCEEECCTTC-CEECT-------TTTTTCTT--------------------
T ss_pred ecccccccccCccc--cccchhhhcccCCCcEEecCCcc-ceecc-------ccccCCCC--------------------
Confidence 44433322222211 11222344444444444443221 11111 23334444
Q ss_pred hccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCCCCce
Q 002376 350 NFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQ 429 (929)
Q Consensus 350 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 429 (929)
|+.+.+..| ++.....+|.++..|+.+.+..+... +...+....+|+.+.+..+ ++......|.++..|+.
T Consensus 187 -----L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~ 257 (394)
T 4fs7_A 187 -----LKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLES 257 (394)
T ss_dssp -----CCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCE
T ss_pred -----ceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceeccccccccccccee
Confidence 555555443 33333445555555555555444322 2222333345555555432 22223344555555666
Q ss_pred ecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcce
Q 002376 430 IDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEE 509 (929)
Q Consensus 430 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~ 509 (929)
+.+..+... .....|.++..++.+....+.+. ...+....+|+.+.+.++ ++..-..+|.++.+|+.
T Consensus 258 ~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~-----------~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~ 324 (394)
T 4fs7_A 258 ISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP-----------EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVS 324 (394)
T ss_dssp EEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC-----------TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCE
T ss_pred EEcCCCcce-eeccccccccccceeccCceeec-----------cccccccccccccccccc-cceechhhhcCCCCCCE
Confidence 555555433 44445555555555555444321 123344555666665543 44334455666666666
Q ss_pred eecccccccccCCccccCCCCCCEEECCCCcCCCcCCcccccCCCCCeEeCCC
Q 002376 510 LLMAYNQFSGPIPNIVAELKGLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTF 562 (929)
Q Consensus 510 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 562 (929)
++|..+ ++.+-..+|.++.+|+.+++..| ++..-..+|.++.+|+.+++..
T Consensus 325 i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~ 375 (394)
T 4fs7_A 325 IDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPK 375 (394)
T ss_dssp ECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEG
T ss_pred EEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECC
Confidence 666533 55455566666666666666655 5544455666666666666643
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.46 E-value=2e-13 Score=134.40 Aligned_cols=104 Identities=22% Similarity=0.229 Sum_probs=81.6
Q ss_pred EEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccccc
Q 002376 75 GLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANK 154 (929)
Q Consensus 75 ~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 154 (929)
.+++++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 13 ~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 3555666666 4676664 788888888888888888888888888888888888887777778888888888888888
Q ss_pred cCCCCChhhhccCCCCcEEEccccccCC
Q 002376 155 ITGRVTDDQLRNLRSLQVLNFGKNLLWG 182 (929)
Q Consensus 155 l~~~i~~~~~~~l~~L~~L~Ls~N~l~~ 182 (929)
|+ .+++..|.++++|++|+|++|.+..
T Consensus 90 l~-~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 90 LK-SIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CC-CCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred cC-EeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 87 4666667788888888888887654
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.46 E-value=1.3e-13 Score=135.74 Aligned_cols=109 Identities=21% Similarity=0.267 Sum_probs=78.5
Q ss_pred cceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCC
Q 002376 451 LLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKG 530 (929)
Q Consensus 451 L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 530 (929)
.+.+++++|.++. +|. .+ .++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++
T Consensus 11 ~~~l~~s~n~l~~-ip~--------~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~ 79 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPT--------GI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQ 79 (170)
T ss_dssp TTEEECTTSCCSS-CCS--------CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTT
T ss_pred CCEEEeCCCCcCc-cCc--------cC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCC
Confidence 4566666666652 332 22 146777777777777777777778888888888888888777777778888
Q ss_pred CCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCcccCC
Q 002376 531 LEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGVVP 570 (929)
Q Consensus 531 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 570 (929)
|++|+|++|+|++..+..|..+++|++|+|++|++++..+
T Consensus 80 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 80 LTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 8888888888887666677778888888888887776543
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=3.1e-13 Score=133.45 Aligned_cols=103 Identities=24% Similarity=0.269 Sum_probs=80.3
Q ss_pred EEEcCCCCCccccCCCCCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccccc
Q 002376 75 GLNLSSFGLEGTISPHIGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANK 154 (929)
Q Consensus 75 ~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 154 (929)
.+++++++++ .+|..+. ++|++|+|++|+|++..|..|+++++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 5778888874 6777665 788888888888887778888888888888888888887666667788888888888888
Q ss_pred cCCCCChhhhccCCCCcEEEccccccC
Q 002376 155 ITGRVTDDQLRNLRSLQVLNFGKNLLW 181 (929)
Q Consensus 155 l~~~i~~~~~~~l~~L~~L~Ls~N~l~ 181 (929)
|+ .+++..|..+++|++|+|++|.+.
T Consensus 93 l~-~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 93 LK-SIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CC-CCCTTTTTTCTTCSEEECCSSCBC
T ss_pred cc-eeCHHHhccccCCCEEEeCCCCcc
Confidence 87 466666777777777777777664
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=2.6e-13 Score=134.05 Aligned_cols=106 Identities=21% Similarity=0.309 Sum_probs=74.6
Q ss_pred ceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCC
Q 002376 452 LSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGL 531 (929)
Q Consensus 452 ~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 531 (929)
+.+++++|+++ .+|. .+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++.++..|..+++|
T Consensus 15 ~~l~~~~n~l~-~iP~--------~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L 83 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPA--------GIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQL 83 (174)
T ss_dssp SEEECCSSCCS-SCCS--------CCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred cEEEeCCCCCC-ccCC--------CcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchh
Confidence 45666666664 3432 221 467777777777777777777777778888888887777666667777888
Q ss_pred CEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCccc
Q 002376 532 EVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGV 568 (929)
Q Consensus 532 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 568 (929)
++|||++|+|++..+..|..+++|++|+|++|++.+.
T Consensus 84 ~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 84 TQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred hEEECCCCccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 8888888888765555677777777777777777654
No 399
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.39 E-value=1.1e-13 Score=151.75 Aligned_cols=134 Identities=13% Similarity=0.073 Sum_probs=90.4
Q ss_pred HHHHhhCCCCCceeecccCceeEEeccccCc-----------------------------HHHHHHHHHHHHccCCcccc
Q 002376 655 ELRRATGNFSHENLIGSGSFGSVLHNERTGS-----------------------------WKSFIAECETLRNVRHRNLV 705 (929)
Q Consensus 655 ~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~-----------------------------~~~~~~E~~~l~~l~Hpniv 705 (929)
.+.+...-|+..+.||+|+||.||+|..... ......++++.+...|+|++
T Consensus 89 ~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~ 168 (397)
T 4gyi_A 89 THAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMK 168 (397)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Confidence 3333333488899999999999999865410 11222333444444455655
Q ss_pred ceeeecccCCCC-CcceEEEEEEecCCCCcccccc--ccccccccHHHHHHHhhhCCCCCEEecCCCCCCeeecCCC---
Q 002376 706 KLITSCSSLDSK-NMEFLALVYEFLSNGSLGDWIH--GERKNELDITSALDYLHNDCEVPVVHSDLKPGNILLDEEM--- 779 (929)
Q Consensus 706 ~l~~~~~~~~~~-~~~~~~lV~e~~~~gsL~~~l~--~~~~~~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~--- 779 (929)
+++......... .....++||||++++.|.++.. ..+....|++.||.|||+. +||||||||.|||+++++
T Consensus 169 rL~~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd~~ 245 (397)
T 4gyi_A 169 ALYEEGFPVPEPIAQSRHTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKDAE 245 (397)
T ss_dssp HHHHTTCSCCCEEEEETTEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEECSS
T ss_pred HHHhcCCCCCeeeeccCceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCCcc
Confidence 554332211000 0011379999999998887654 2334567999999999998 999999999999998776
Q ss_pred -------ceEEeccccccc
Q 002376 780 -------TAKVGDFGLARF 791 (929)
Q Consensus 780 -------~~ki~DfGla~~ 791 (929)
.+.|+||+-+..
T Consensus 246 d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 246 DPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp CTTSEEEEEEECCCTTCEE
T ss_pred cccccccceEEEEeCCccc
Confidence 389999998754
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.34 E-value=1.9e-12 Score=143.40 Aligned_cols=109 Identities=23% Similarity=0.248 Sum_probs=91.3
Q ss_pred CCCCcceeeCCCCCcEEEEEcCCCCCccccCCCCCCCCCCCEEEeec-CCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcc
Q 002376 58 PCTWPGVICNNFGNRVIGLNLSSFGLEGTISPHIGNLSFLRSIQLQN-NKLSGNLPREIGNLFRLRVLNISFNNLQGELP 136 (929)
Q Consensus 58 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~L~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 136 (929)
.|.|.+|.|++. |+|+ .||. |..+++|++|+|++ |.|++..|..|++|++|++|+|++|+|++..|
T Consensus 7 ~C~~~~v~~~~~-----------n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 73 (347)
T 2ifg_A 7 PHGSSGLRCTRD-----------GALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAP 73 (347)
T ss_dssp CSSSSCEECCSS-----------CCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECT
T ss_pred cccCCEEEcCCC-----------CCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCH
Confidence 388877777542 1566 4888 99999999999996 99998888899999999999999999999889
Q ss_pred cccccccccceecccccccCCCCChhhhccCCCCcEEEccccccC
Q 002376 137 VNISKLTELKMLDLMANKITGRVTDDQLRNLRSLQVLNFGKNLLW 181 (929)
Q Consensus 137 ~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~ 181 (929)
..|.++++|++|||++|+|+ .+|+..|..++ |+.|+|++|.+.
T Consensus 74 ~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 74 DAFHFTPRLSRLNLSFNALE-SLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp TGGGSCSCCCEEECCSSCCS-CCCSTTTCSCC-CCEEECCSSCCC
T ss_pred HHhcCCcCCCEEeCCCCccc-eeCHHHcccCC-ceEEEeeCCCcc
Confidence 89999999999999999998 57777676666 888888888764
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.31 E-value=2.3e-14 Score=159.53 Aligned_cols=13 Identities=31% Similarity=0.468 Sum_probs=6.8
Q ss_pred cccEEEecCCccc
Q 002376 354 ELSKLYLGGNHIY 366 (929)
Q Consensus 354 ~L~~L~Ls~N~l~ 366 (929)
.|+.|+|++|.|+
T Consensus 73 ~L~~L~Ls~n~l~ 85 (372)
T 3un9_A 73 SLRQLNLAGVRMT 85 (372)
T ss_dssp TCCEEECTTSCCC
T ss_pred hCCEEEecCCCCC
Confidence 4555555555554
No 402
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.30 E-value=3.5e-10 Score=127.29 Aligned_cols=329 Identities=12% Similarity=0.106 Sum_probs=167.2
Q ss_pred CCCCCC-CCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCC---CCCCcccccccccccceecccccccCCCCChhhhc
Q 002376 90 HIGNLS-FLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNN---LQGELPVNISKLTELKMLDLMANKITGRVTDDQLR 165 (929)
Q Consensus 90 ~l~~L~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~ 165 (929)
.|.+.. .|+.+.+..+ ++.+-..+|.++++|+.+.++.|. ++.+-...|.++.+|+.+.+..+ ++ .++..+|.
T Consensus 58 aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~-~I~~~aF~ 134 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VT-EIDSEAFH 134 (394)
T ss_dssp TTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CS-EECTTTTT
T ss_pred hccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cc-eehhhhhh
Confidence 455553 5788887643 665666778888888888887664 55444566777777877777654 43 56667777
Q ss_pred cCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccc
Q 002376 166 NLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVR 245 (929)
Q Consensus 166 ~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~ 245 (929)
++.+|+.+.+..+ +..+....|..+.+|+.+.+..+ ++.+...+|.+ .+|+.+.+..+-. .+....+
T Consensus 135 ~c~~L~~i~lp~~---------~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~--~i~~~af 201 (394)
T 4gt6_A 135 HCEELDTVTIPEG---------VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVT--RIGTNAF 201 (394)
T ss_dssp TCTTCCEEECCTT---------CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCC--EECTTTT
T ss_pred hhcccccccccce---------eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCccc--ccccchh
Confidence 7777877777543 22334456677777777777544 55455555543 5677776654432 2333333
Q ss_pred cCCCCcceeeccCCcCCCCCCCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccC
Q 002376 246 DTLPNLLDFIYCFNRFTGKIPGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLT 325 (929)
Q Consensus 246 ~~l~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~ 325 (929)
....++.......+.........+.......... ..+.....+..+.+. +.+..++. .+|.
T Consensus 202 ~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ip-~~v~~i~~-------~aF~ 262 (394)
T 4gt6_A 202 SECFALSTITSDSESYPAIDNVLYEKSANGDYAL-----------IRYPSQREDPAFKIP-NGVARIET-------HAFD 262 (394)
T ss_dssp TTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEE-----------EECCTTCCCSEEECC-TTEEEECT-------TTTT
T ss_pred hhccccceecccccccccccceeecccccccccc-----------cccccccccceEEcC-CcceEccc-------ceee
Confidence 3344444443333322211000000000000000 000011111111111 11111111 2455
Q ss_pred CCCCCCEEEccCCccccccCchhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCE
Q 002376 326 NSTHLNYLALDGNQFEGKIPESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQV 405 (929)
Q Consensus 326 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 405 (929)
++..|+.+.+..+..+ .-...+.++. .|+.+.+. +.++.....+|.++.+|+.++|..+ ++..-..+|.++.+|+.
T Consensus 263 ~c~~L~~i~lp~~~~~-I~~~aF~~c~-~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~ 338 (394)
T 4gt6_A 263 SCAYLASVKMPDSVVS-IGTGAFMNCP-ALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLER 338 (394)
T ss_dssp TCSSCCEEECCTTCCE-ECTTTTTTCT-TCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCE
T ss_pred ecccccEEecccccce-ecCccccccc-ccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCE
Confidence 6666666666544332 2223333333 56666664 3445455566667777777777643 44444556666677777
Q ss_pred EEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcC
Q 002376 406 LGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRI 461 (929)
Q Consensus 406 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 461 (929)
+.+..+ ++..-..+|.++++|+.+++.+|.... ..|....+|+.+.+..|.+
T Consensus 339 i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 339 IAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp EEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred EEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 766543 554555666677777777766665432 2445555666666555443
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.28 E-value=1.2e-10 Score=131.19 Aligned_cols=334 Identities=14% Similarity=0.115 Sum_probs=180.6
Q ss_pred CCCcCCCCCC-CCcEEeCCCCCCCCCcccccccccccceecccccc---cCCCCChhhhccCCCCcEEEccccccCCCCC
Q 002376 110 NLPREIGNLF-RLRVLNISFNNLQGELPVNISKLTELKMLDLMANK---ITGRVTDDQLRNLRSLQVLNFGKNLLWGSIP 185 (929)
Q Consensus 110 ~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p 185 (929)
+-..+|.+++ .|+.+.+..+ ++.+-..+|.++++|+.+.++.|. ++ .|...+|.++.+|+.+.+..+
T Consensus 54 Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~-~Ig~~aF~~c~~L~~i~~~~~------- 124 (394)
T 4gt6_A 54 IGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVK-KIGRQAFMFCSELTDIPILDS------- 124 (394)
T ss_dssp ECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCC-EECTTTTTTCTTCCBCGGGTT-------
T ss_pred cCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeee-EechhhchhcccceeeccCCc-------
Confidence 3455677764 5888888644 665566778888888888887764 44 566677777777776655433
Q ss_pred ccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecCCCCcCCcccccCCCCcceeeccCCcCCCCC
Q 002376 186 PSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQLGGEIPYDVRDTLPNLLDFIYCFNRFTGKI 265 (929)
Q Consensus 186 ~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~l~l~~N~l~~~~ 265 (929)
+..+....|..+.+|+.+.+.. .+..+....|.++.+|+.+.+..+ +. .|....+. -.
T Consensus 125 --~~~I~~~aF~~c~~L~~i~lp~-~~~~I~~~~F~~c~~L~~i~~~~~-~~-~I~~~aF~-~~---------------- 182 (394)
T 4gt6_A 125 --VTEIDSEAFHHCEELDTVTIPE-GVTSVADGMFSYCYSLHTVTLPDS-VT-AIEERAFT-GT---------------- 182 (394)
T ss_dssp --CSEECTTTTTTCTTCCEEECCT-TCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTT-TC----------------
T ss_pred --cceehhhhhhhhcccccccccc-eeeeecccceecccccccccccce-ee-Eecccccc-cc----------------
Confidence 3344455677777777777753 344456667777777777776544 22 33333333 12
Q ss_pred CCcccccccccEEeccCccCcCCccCCCCCCCccceeccccccccCCCCCCCCccccccCCCCCCCEEEccCCccccccC
Q 002376 266 PGSLHNLTNIQIIRMTHNLLEGTLPPGLGNLPFLRTYNIGFNKIVSSGDDEGLSFITSLTNSTHLNYLALDGNQFEGKIP 345 (929)
Q Consensus 266 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 345 (929)
+|+.+.+..+... .-..+|.++..++......+........ .+........-... .|
T Consensus 183 --------~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-------~~ 239 (394)
T 4gt6_A 183 --------ALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPAIDNV-------LYEKSANGDYALIR-------YP 239 (394)
T ss_dssp --------CCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCBSSSC-------EEEECTTSCEEEEE-------CC
T ss_pred --------ceeEEEECCcccc-cccchhhhccccceecccccccccccce-------eecccccccccccc-------cc
Confidence 3444444332211 2233444444444444333322211100 00000000000000 00
Q ss_pred chhhhccccccEEEecCCccccccCCCCCCCCcccEEEeeCCCCCcccCccccCCCCCCEEEecCCcCCCCCcccccCCC
Q 002376 346 ESIGNFSNELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGNEIPGGIPNSLANLK 425 (929)
Q Consensus 346 ~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 425 (929)
.. ..+..+.+. +.++.....+|.++++|+.+.+..+..+ .....|.++++|+.+.+. +.++.....+|.++.
T Consensus 240 ----~~-~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~ 311 (394)
T 4gt6_A 240 ----SQ-REDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCI 311 (394)
T ss_dssp ----TT-CCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCT
T ss_pred ----cc-cccceEEcC-CcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCC
Confidence 00 022233322 2233344566777777777777655433 455667777777777775 445545556777788
Q ss_pred CCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCCCCCcchhcCc
Q 002376 426 KLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSGNLPNSLKNCK 505 (929)
Q Consensus 426 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~ 505 (929)
+|+.++|..+ ++.+-..+|.++.+|+.+.+..+ ++ .|+ ...|.++++|+.+++.+|.... ..+..+.
T Consensus 312 ~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~-------~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~ 378 (394)
T 4gt6_A 312 SLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIP-------ESAFSNCTALNNIEYSGSRSQW---NAISTDS 378 (394)
T ss_dssp TCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCC-------GGGGTTCTTCCEEEESSCHHHH---HTCBCCC
T ss_pred CcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEh-------HhHhhCCCCCCEEEECCceeeh---hhhhccC
Confidence 8888887654 55555667888888888877654 33 232 3456777788888888775431 4566777
Q ss_pred Ccceeeccccccc
Q 002376 506 SLEELLMAYNQFS 518 (929)
Q Consensus 506 ~L~~L~Ls~N~l~ 518 (929)
+|+.+.+..|.+.
T Consensus 379 ~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 379 GLQNLPVAPGSID 391 (394)
T ss_dssp CC-----------
T ss_pred CCCEEEeCCCCEE
Confidence 8888877766543
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.27 E-value=2.6e-13 Score=151.01 Aligned_cols=87 Identities=21% Similarity=0.305 Sum_probs=50.5
Q ss_pred cCccEEEecCCCCCC----CCCcchhcCcCcceeeccccccccc----CCccccCCCCCCEEECCCCcCCCc----CCcc
Q 002376 481 ENVVTIDLSDNSLSG----NLPNSLKNCKSLEELLMAYNQFSGP----IPNIVAELKGLEVLDLSSNKLSGS----IPSD 548 (929)
Q Consensus 481 ~~L~~LdLs~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 548 (929)
++|++|+|++|.++. .++..+..+++|++|+|++|.|+.. ++..+...++|+.|||++|.|+.. ++..
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 445555555555542 1233345556666666666666532 244555666777777777777642 2334
Q ss_pred cccCCCCCeEeCCCCcCcc
Q 002376 549 LQNLQALRSLNLTFNNLEG 567 (929)
Q Consensus 549 ~~~l~~L~~L~Ls~N~l~~ 567 (929)
+...+.|++|||++|.++.
T Consensus 235 L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 235 AREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHCSSCCEEECTTSSCCH
T ss_pred HHhCCCCCEEeccCCCCCH
Confidence 4455677777777777754
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.20 E-value=2.4e-11 Score=134.44 Aligned_cols=106 Identities=19% Similarity=0.198 Sum_probs=84.4
Q ss_pred ceecccCC-cCCCCCCCCcccCCchhhhcccCccEEEecC-CCCCCCCCcchhcCcCcceeecccccccccCCccccCCC
Q 002376 452 LSIDLSNN-RINGNIPKGILRPLPEEISRLENVVTIDLSD-NSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELK 529 (929)
Q Consensus 452 ~~L~Ls~N-~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 529 (929)
..++++++ +|++ | |. +..+++|+.|+|++ |+|++..|..|+++++|+.|+|++|+|++.+|..|..++
T Consensus 11 ~~v~~~~~n~l~~-i--------p~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 80 (347)
T 2ifg_A 11 SGLRCTRDGALDS-L--------HH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTP 80 (347)
T ss_dssp SCEECCSSCCCTT-T--------TT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCS
T ss_pred CEEEcCCCCCCCc-c--------CC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCc
Confidence 35677777 7763 3 55 77778888888885 888887778888888888888888888888888888888
Q ss_pred CCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCcCccc
Q 002376 530 GLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNNLEGV 568 (929)
Q Consensus 530 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 568 (929)
+|+.|||++|+|++..+..|..++ |+.|+|++|+|.+.
T Consensus 81 ~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 81 RLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp CCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred CCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 888888888888876666666665 88888888888764
No 406
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.01 E-value=1.9e-08 Score=112.40 Aligned_cols=128 Identities=8% Similarity=0.109 Sum_probs=72.5
Q ss_pred CCCCCCCCEEEeecCCCCCCCCcCCCCCCCCcEEeCCCCCCCCCcccccccccccceecccccccCCCCChhhhccCCCC
Q 002376 91 IGNLSFLRSIQLQNNKLSGNLPREIGNLFRLRVLNISFNNLQGELPVNISKLTELKMLDLMANKITGRVTDDQLRNLRSL 170 (929)
Q Consensus 91 l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L 170 (929)
+..-.+|+.+.+.. .++.+-..+|.++.+|+.++|..+ ++.+-..+|.++ +|+.+.+..+ ++ .|...+|.+. +|
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~-~I~~~aF~~~-~L 115 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VK-KFGDYVFQGT-DL 115 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CC-EECTTTTTTC-CC
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-ee-EeccceeccC-Cc
Confidence 33445666666643 355444566777777777777643 554445566665 5666666543 43 4666666553 67
Q ss_pred cEEEccccccCCCCCccccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeecC
Q 002376 171 QVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASNQ 235 (929)
Q Consensus 171 ~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 235 (929)
+.+.+..+. ..+....|.+. +|+.+.+.. .++.+....|.++.+++...+..+.
T Consensus 116 ~~i~lp~~~---------~~i~~~~F~~~-~l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~~~ 169 (379)
T 4h09_A 116 DDFEFPGAT---------TEIGNYIFYNS-SVKRIVIPK-SVTTIKDGIGYKAENLEKIEVSSNN 169 (379)
T ss_dssp SEEECCTTC---------CEECTTTTTTC-CCCEEEECT-TCCEECSCTTTTCTTCCEEEECTTC
T ss_pred ccccCCCcc---------ccccccccccc-eeeeeeccc-eeeccccchhccccccccccccccc
Confidence 777765442 22223344443 455554433 3455566667777777777666544
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.97 E-value=1.5e-08 Score=113.25 Aligned_cols=132 Identities=12% Similarity=0.196 Sum_probs=59.1
Q ss_pred ccccCCCCCCEEEecCCcCCCCCcccccCCCCCceecccCcccccccCcccccccccceecccCCcCCCCCCCCcccCCc
Q 002376 395 IEIGQLQGLQVLGLAGNEIPGGIPNSLANLKKLNQIDLSGNELTGEIPISFGNFQSLLSIDLSNNRINGNIPKGILRPLP 474 (929)
Q Consensus 395 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p 474 (929)
..+....+|+.+.+..+ +.......|.++..|+.+.+..+ ++.+-..+|.++.+|+.+.+..+ ++ .++ .
T Consensus 211 ~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~-------~ 279 (379)
T 4h09_A 211 YGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVP-------Y 279 (379)
T ss_dssp TTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EEC-------T
T ss_pred cccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-ecc-------c
Confidence 33444444555544433 22233344555555555555443 33334445555555555555332 21 111 1
Q ss_pred hhhhcccCccEEEecCCCCCCCCCcchhcCcCcceeecccccccccCCccccCCCCCCEEECCC
Q 002376 475 EEISRLENVVTIDLSDNSLSGNLPNSLKNCKSLEELLMAYNQFSGPIPNIVAELKGLEVLDLSS 538 (929)
Q Consensus 475 ~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 538 (929)
..|..+++|+.+++.++.++..-+.+|.+|.+|+.+.|..+ ++.+-..+|.++++|+.+.+..
T Consensus 280 ~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 280 LLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp TTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred cccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 22334444444554444444333444555555555555432 4433344555555555555443
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.88 E-value=2.4e-10 Score=125.96 Aligned_cols=161 Identities=16% Similarity=0.174 Sum_probs=94.2
Q ss_pred cEEEEEcCCCCCcc-c-------cCCCCCCCCCCCEEEeecCCCC---------CCCCcCCCCCCCCcEEeCCCCCCCCC
Q 002376 72 RVIGLNLSSFGLEG-T-------ISPHIGNLSFLRSIQLQNNKLS---------GNLPREIGNLFRLRVLNISFNNLQGE 134 (929)
Q Consensus 72 ~v~~l~l~~~~l~g-~-------i~~~l~~L~~L~~L~Ls~N~l~---------~~~p~~~~~l~~L~~L~Ls~N~l~~~ 134 (929)
+|+.|.+...+..| . +..++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-. .
T Consensus 108 ~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~ 186 (362)
T 2ra8_A 108 SLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-S 186 (362)
T ss_dssp GCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-B
T ss_pred hcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-e
Confidence 67788877666553 2 2455677899999999776432 123344567788999999887311 2
Q ss_pred cccccccccccceecccccccCCCCChhhhc--cCCCCcEEEccc--cccCCCC-CccccccCCCccCCCCcccEEEeec
Q 002376 135 LPVNISKLTELKMLDLMANKITGRVTDDQLR--NLRSLQVLNFGK--NLLWGSI-PPSIANLIPSDLSRLENLKVLDLTI 209 (929)
Q Consensus 135 ~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~--~l~~L~~L~Ls~--N~l~~~~-p~~i~~l~p~~~~~l~~L~~L~Ls~ 209 (929)
++. + .+++|++|+|..|.++... ...+. .+++|+.|+|+. |...+.. ...+..++.. ..+++|++|+|++
T Consensus 187 l~~-~-~~~~L~~L~L~~~~l~~~~-l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~--~~~p~Lr~L~L~~ 261 (362)
T 2ra8_A 187 IGK-K-PRPNLKSLEIISGGLPDSV-VEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSK--DRFPNLKWLGIVD 261 (362)
T ss_dssp CCS-C-BCTTCSEEEEECSBCCHHH-HHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCT--TTCTTCCEEEEES
T ss_pred ecc-c-cCCCCcEEEEecCCCChHH-HHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhc--CCCCCcCEEeCCC
Confidence 333 3 3788899998888765211 11233 678888888863 2221110 0111111110 2467777777777
Q ss_pred ccCCCccCCccc---cCCCCceEEeeecCCCC
Q 002376 210 NRLAGTVPSTIY---NMTSLVHLRLASNQLGG 238 (929)
Q Consensus 210 N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~ 238 (929)
|.+....+..+. .+++|++|+|+.|.|++
T Consensus 262 ~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 262 AEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp CTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred CCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 777643333332 35667777777776653
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.84 E-value=4.9e-10 Score=123.47 Aligned_cols=64 Identities=16% Similarity=0.210 Sum_probs=32.8
Q ss_pred ccCccEEEecCCCCCCCCCcchh---cCcCcceeeccccccccc----CCccccCCCCCCEEECCCCcCCC
Q 002376 480 LENVVTIDLSDNSLSGNLPNSLK---NCKSLEELLMAYNQFSGP----IPNIVAELKGLEVLDLSSNKLSG 543 (929)
Q Consensus 480 l~~L~~LdLs~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~ 543 (929)
+++|+.|+|++|.+.+..+..+. .+++|+.|+|+.|.|++. ++..+..+++|+.|+|++|.++.
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 44566666666655432222222 345566666666666542 22223345566666666665553
No 410
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.82 E-value=3.4e-11 Score=125.86 Aligned_cols=162 Identities=18% Similarity=0.192 Sum_probs=91.7
Q ss_pred CCCCcceeeCCCCCcEEEEEcCC---CCCccccCC-CCCCCCCCCEEEeecCCCCCCCCc-CCCCCCCCcE--EeCCCCC
Q 002376 58 PCTWPGVICNNFGNRVIGLNLSS---FGLEGTISP-HIGNLSFLRSIQLQNNKLSGNLPR-EIGNLFRLRV--LNISFNN 130 (929)
Q Consensus 58 ~c~w~gv~c~~~~~~v~~l~l~~---~~l~g~i~~-~l~~L~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~--L~Ls~N~ 130 (929)
.|.|.|++|+..+.+|+.+-..+ ..+.|.+++ .+..|+. .|...+|.-++.++- .|...+.|+. ++++.|.
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 58999999997666776655544 233444432 1222221 122222322222221 2444455555 6667664
Q ss_pred CC---CCcccccccccccceecccccccCC--CCChhhhccCCCCcEEEccccccCCCCCccccccCCCccCCCCcccEE
Q 002376 131 LQ---GELPVNISKLTELKMLDLMANKITG--RVTDDQLRNLRSLQVLNFGKNLLWGSIPPSIANLIPSDLSRLENLKVL 205 (929)
Q Consensus 131 l~---~~~p~~~~~l~~L~~L~Ls~N~l~~--~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~i~~l~p~~~~~l~~L~~L 205 (929)
.. +.++....++++|++|+|++|+|++ .++. .+..+++|+.|+|++|++.+. ..+ ..+..+ +|+.|
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~-~~~~l~~L~~L~Ls~N~i~~~--~~l-----~~l~~l-~L~~L 225 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSS-IVQKAPNLKILNLSGNELKSE--REL-----DKIKGL-KLEEL 225 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTT-HHHHSTTCCEEECTTSCCCSG--GGG-----GGGTTS-CCSEE
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchh-HHhhCCCCCEEECCCCccCCc--hhh-----hhcccC-CcceE
Confidence 33 1122222456778888888888875 2222 366788888888888877542 111 122334 78888
Q ss_pred EeecccCCCccCC-------ccccCCCCceEE
Q 002376 206 DLTINRLAGTVPS-------TIYNMTSLVHLR 230 (929)
Q Consensus 206 ~Ls~N~l~~~~p~-------~~~~l~~L~~L~ 230 (929)
+|++|.+.+..|. .+..+++|+.||
T Consensus 226 ~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 226 WLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp ECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred EccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 8888888765552 366778888775
No 411
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.78 E-value=4.7e-09 Score=110.86 Aligned_cols=132 Identities=14% Similarity=0.059 Sum_probs=99.0
Q ss_pred HHHHhhCCCCCceeecccCceeEEecccc--------------CcHHHHHHHHHHHHccC-CccccceeeecccCCCCCc
Q 002376 655 ELRRATGNFSHENLIGSGSFGSVLHNERT--------------GSWKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNM 719 (929)
Q Consensus 655 ~l~~~~~~~~~~~~iG~G~~g~Vy~~~~~--------------~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~ 719 (929)
.+....++|+.....|.|+.+.||+.... .....+.+|+++++.+. |..+.++++++.. .
T Consensus 8 ~l~~~l~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~-----~ 82 (263)
T 3tm0_A 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH-----D 82 (263)
T ss_dssp HHHHHHTTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE-----T
T ss_pred HHHHHhccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEec-----C
Confidence 34555677888888888888999986532 12235889999999985 6677888888743 2
Q ss_pred ceEEEEEEecCCCCcccccc---ccccccccHHHHHHHhhhCC-------------------------------------
Q 002376 720 EFLALVYEFLSNGSLGDWIH---GERKNELDITSALDYLHNDC------------------------------------- 759 (929)
Q Consensus 720 ~~~~lV~e~~~~gsL~~~l~---~~~~~~~~ia~aL~yLH~~~------------------------------------- 759 (929)
+..|+||||++|.++.+... .......+++++++.||+..
T Consensus 83 ~~~~lv~e~i~G~~l~~~~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (263)
T 3tm0_A 83 GWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDT 162 (263)
T ss_dssp TEEEEEEECCSSEEHHHHCCTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTC
T ss_pred CceEEEEEecCCeehhhccCCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccc
Confidence 34799999999999887532 22234678889999999810
Q ss_pred -------------------CCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 760 -------------------EVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 760 -------------------~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
.+.++|+|++|.||+++++..+.|.||+.+..
T Consensus 163 ~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 163 PFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp SSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 13589999999999998766677999998753
No 412
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.61 E-value=2e-08 Score=105.77 Aligned_cols=127 Identities=14% Similarity=0.057 Sum_probs=86.2
Q ss_pred hhCCCCCceeecccCceeEEecccc------------CcHHHHHHHHHHHHccCCcc--ccceeeecccCCCCCcceEEE
Q 002376 659 ATGNFSHENLIGSGSFGSVLHNERT------------GSWKSFIAECETLRNVRHRN--LVKLITSCSSLDSKNMEFLAL 724 (929)
Q Consensus 659 ~~~~~~~~~~iG~G~~g~Vy~~~~~------------~~~~~~~~E~~~l~~l~Hpn--iv~l~~~~~~~~~~~~~~~~l 724 (929)
...+|......+.|..+.||+.... .....+.+|+++++.+.+.+ +.+++++.... +..++
T Consensus 18 ~~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~-----~~~~~ 92 (264)
T 1nd4_A 18 RLFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEA-----GRDWL 92 (264)
T ss_dssp TTTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECS-----SCEEE
T ss_pred hcCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcccchhhhHHHHHHHHHHhCCCCCCeEEEeccCC-----CCCEE
Confidence 3444554333345556888876532 11245789999999996544 44577776432 33799
Q ss_pred EEEecCCCCccccccc-cccccccHHHHHHHhhhCC--------------------------------------------
Q 002376 725 VYEFLSNGSLGDWIHG-ERKNELDITSALDYLHNDC-------------------------------------------- 759 (929)
Q Consensus 725 V~e~~~~gsL~~~l~~-~~~~~~~ia~aL~yLH~~~-------------------------------------------- 759 (929)
||||++|.++. +-.. ......+++++++.||+..
T Consensus 93 v~e~i~G~~l~-~~~~~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
T 1nd4_A 93 LLGEVPGQDLL-SSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF 171 (264)
T ss_dssp EEECCSSEETT-TSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred EEEecCCcccC-cCcCCHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHH
Confidence 99999998885 2111 1234567788888888742
Q ss_pred -----------CCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 760 -----------EVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 760 -----------~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
.+.++|+|++|.||++++++.++|.|||.+..
T Consensus 172 ~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 172 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998876778999998764
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.51 E-value=2.5e-08 Score=104.17 Aligned_cols=108 Identities=20% Similarity=0.282 Sum_probs=68.4
Q ss_pred cccccccce--ecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCCCCCC--CCCcchhcCcCcceeeccccccccc
Q 002376 445 FGNFQSLLS--IDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDNSLSG--NLPNSLKNCKSLEELLMAYNQFSGP 520 (929)
Q Consensus 445 ~~~l~~L~~--L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~ 520 (929)
|...+.|.. ++++.|+.. .++ ..++....++++|+.|+||+|+|++ .+|..+..+++|+.|+|++|+|++.
T Consensus 137 l~~dp~L~~~~l~l~~N~~~-~~~----~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~ 211 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRS-CMA----ATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE 211 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHH-HHH----HHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG
T ss_pred cCCCcchhhcCccccCCHHH-HHH----HHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc
Confidence 444455555 666766432 110 0001122456778888888888877 4456677788888888888888765
Q ss_pred CCccccCCC--CCCEEECCCCcCCCcCCc-------ccccCCCCCeEe
Q 002376 521 IPNIVAELK--GLEVLDLSSNKLSGSIPS-------DLQNLQALRSLN 559 (929)
Q Consensus 521 ~p~~~~~l~--~L~~L~Ls~N~l~~~~p~-------~~~~l~~L~~L~ 559 (929)
..+..++ +|+.|+|++|.+++.+|. .+..+++|+.||
T Consensus 212 --~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 212 --RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp --GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred --hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 2333344 788888888888876652 356677777776
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.37 E-value=3.6e-08 Score=97.92 Aligned_cols=42 Identities=19% Similarity=0.236 Sum_probs=19.2
Q ss_pred ccCCCCCCEEEC--CCCcCCCc----CCcccccCCCCCeEeCCCCcCc
Q 002376 525 VAELKGLEVLDL--SSNKLSGS----IPSDLQNLQALRSLNLTFNNLE 566 (929)
Q Consensus 525 ~~~l~~L~~L~L--s~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 566 (929)
+...+.|++|+| ++|.+... +...+...+.|++|+|++|.+.
T Consensus 117 L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 117 LQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 333444555555 44544432 1223333455555555555543
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.34 E-value=5.2e-08 Score=96.75 Aligned_cols=122 Identities=16% Similarity=0.202 Sum_probs=89.8
Q ss_pred CcccccCCCCCceecccCc-ccccc----cCcccccccccceecccCCcCCCCCCCCcccCCchhhhcccCccEEEecCC
Q 002376 417 IPNSLANLKKLNQIDLSGN-ELTGE----IPISFGNFQSLLSIDLSNNRINGNIPKGILRPLPEEISRLENVVTIDLSDN 491 (929)
Q Consensus 417 ~p~~~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~~p~~~~~l~~L~~LdLs~N 491 (929)
+...+...+.|++|+|++| .+... +...+...++|++|+|++|+|...- ...+...+...++|++|||++|
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g----~~~l~~~L~~n~~L~~L~L~~N 103 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPV----AFALAEMLKVNNTLKSLNVESN 103 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHH----HHHHHHHHHHCSSCCEEECCSS
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHH----HHHHHHHHHhCCCcCEEECcCC
Confidence 3445677889999999999 88643 3344566788999999999986311 1112344556688999999999
Q ss_pred CCCCC----CCcchhcCcCcceeec--cccccccc----CCccccCCCCCCEEECCCCcCC
Q 002376 492 SLSGN----LPNSLKNCKSLEELLM--AYNQFSGP----IPNIVAELKGLEVLDLSSNKLS 542 (929)
Q Consensus 492 ~l~~~----~p~~~~~l~~L~~L~L--s~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 542 (929)
.++.. +...+...++|++|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 104 ~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 104 FISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp CCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred cCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 98753 3556777788999999 88998754 3455666789999999999875
No 416
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.23 E-value=9.7e-07 Score=97.66 Aligned_cols=124 Identities=15% Similarity=0.198 Sum_probs=87.2
Q ss_pred ceeecccCceeEEecccc---------C--------cHHHHHHHHHHHHccC--CccccceeeecccCCCCCcceEEEEE
Q 002376 666 ENLIGSGSFGSVLHNERT---------G--------SWKSFIAECETLRNVR--HRNLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 666 ~~~iG~G~~g~Vy~~~~~---------~--------~~~~~~~E~~~l~~l~--Hpniv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
.+.++.|.++.||+.... . ....+.+|+++++.+. +..+.++++++.+.+. .+..|+||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~--~g~~~~vm 120 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESV--IGRAFYIM 120 (359)
T ss_dssp EEECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTT--TSSCEEEE
T ss_pred EEEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCc--cCCeEEEE
Confidence 467888888888875432 1 1246788999999997 4557888888754321 13468999
Q ss_pred EecCCCCcccc-ccc-----cccccccHHHHHHHhhhCC-----------------------------------------
Q 002376 727 EFLSNGSLGDW-IHG-----ERKNELDITSALDYLHNDC----------------------------------------- 759 (929)
Q Consensus 727 e~~~~gsL~~~-l~~-----~~~~~~~ia~aL~yLH~~~----------------------------------------- 759 (929)
||++|..+.+. +.. ......+++++|+.||+..
T Consensus 121 e~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (359)
T 3dxp_A 121 EFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSL 200 (359)
T ss_dssp ECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHH
T ss_pred EecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHH
Confidence 99999888542 211 1233567888899999731
Q ss_pred --------------CCCEEecCCCCCCeeecCCCc--eEEeccccccc
Q 002376 760 --------------EVPVVHSDLKPGNILLDEEMT--AKVGDFGLARF 791 (929)
Q Consensus 760 --------------~~~iiHrDlk~~NILl~~~~~--~ki~DfGla~~ 791 (929)
.+.++|+|+++.||++++++. +.|.||+.+..
T Consensus 201 ~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 201 MDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246999999999999997753 68999999875
No 417
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=97.79 E-value=2.4e-05 Score=84.09 Aligned_cols=124 Identities=15% Similarity=0.216 Sum_probs=81.4
Q ss_pred ceeecccCceeEEecccc---------CcHHHHHHHHHHHHccC-Ccc--ccceeeecccCCCCCcceEEEEEEecCCCC
Q 002376 666 ENLIGSGSFGSVLHNERT---------GSWKSFIAECETLRNVR-HRN--LVKLITSCSSLDSKNMEFLALVYEFLSNGS 733 (929)
Q Consensus 666 ~~~iG~G~~g~Vy~~~~~---------~~~~~~~~E~~~l~~l~-Hpn--iv~l~~~~~~~~~~~~~~~~lV~e~~~~gs 733 (929)
.+.++.|....||+.... .....+.+|+++++.+. +.. +.+.+.+.... ......|+||||++|.+
T Consensus 25 i~~~~~G~~n~v~~v~~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~--~~~~~~~~vm~~i~G~~ 102 (304)
T 3sg8_A 25 IEISGEGNDCIAYEINRDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPS--ETYQMSFAGFTKIKGVP 102 (304)
T ss_dssp CCEEEECSSEEEEESTTSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCC--SSCSCSCEEEECCCCEE
T ss_pred eEecCCCCcceEEEECCEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCC--CCCCcceEEEcccCCeE
Confidence 456899999999986532 12457889999999884 332 33444443221 11223589999999988
Q ss_pred ccccccc------cccccccHHHHHHHhhhC-------------------------------------------------
Q 002376 734 LGDWIHG------ERKNELDITSALDYLHND------------------------------------------------- 758 (929)
Q Consensus 734 L~~~l~~------~~~~~~~ia~aL~yLH~~------------------------------------------------- 758 (929)
+.+.... ....+.++++.++.||+.
T Consensus 103 l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 182 (304)
T 3sg8_A 103 LTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILE 182 (304)
T ss_dssp CCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHT
T ss_pred CCccccccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHh
Confidence 8653211 122344556666666641
Q ss_pred ------CCCCEEecCCCCCCeeecC--CCceEEeccccccc
Q 002376 759 ------CEVPVVHSDLKPGNILLDE--EMTAKVGDFGLARF 791 (929)
Q Consensus 759 ------~~~~iiHrDlk~~NILl~~--~~~~ki~DfGla~~ 791 (929)
..+.++|+|++|.||++++ ...+.|.||+.+..
T Consensus 183 ~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~ 223 (304)
T 3sg8_A 183 NEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI 223 (304)
T ss_dssp CGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred ccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence 1246899999999999998 45688999998864
No 418
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=97.67 E-value=6.1e-05 Score=81.61 Aligned_cols=121 Identities=15% Similarity=0.119 Sum_probs=82.0
Q ss_pred CCCCceeecccCceeEEecccc---------CcHHHHHHHHHHHHccCC---c-cccceeeecccCCCCCcceEEEEEEe
Q 002376 662 NFSHENLIGSGSFGSVLHNERT---------GSWKSFIAECETLRNVRH---R-NLVKLITSCSSLDSKNMEFLALVYEF 728 (929)
Q Consensus 662 ~~~~~~~iG~G~~g~Vy~~~~~---------~~~~~~~~E~~~l~~l~H---p-niv~l~~~~~~~~~~~~~~~~lV~e~ 728 (929)
.+...+.++.|....||+.... .....+.+|.++++.+.+ + .+.+++++ + ..++||||
T Consensus 38 ~i~~v~~l~~G~~n~vy~vg~~~vlR~~~~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~-----~~~lvme~ 108 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLCNEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQ----S-----DRFNIMKY 108 (320)
T ss_dssp CCSCEEEEEECSSEEEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----C-----SSCEEEEC
T ss_pred ceEEEEeCCCCCCceEEEECCEEEEEeCCcHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----C-----CcEEEEee
Confidence 5566788999999999976221 113568899999999876 2 23344443 1 14899999
Q ss_pred cCCCCcccccc------ccccccccHHHHHHHhhhCC-------------------------------------------
Q 002376 729 LSNGSLGDWIH------GERKNELDITSALDYLHNDC------------------------------------------- 759 (929)
Q Consensus 729 ~~~gsL~~~l~------~~~~~~~~ia~aL~yLH~~~------------------------------------------- 759 (929)
++|.++.+... +....+.++++.++.||+..
T Consensus 109 i~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (320)
T 3r70_A 109 IKGERITYEQYHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEH 188 (320)
T ss_dssp CCCBCCCHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred cCCccccccccccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHH
Confidence 99988863211 01122344555555555321
Q ss_pred -----------------CCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 760 -----------------EVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 760 -----------------~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
.+.++|+|++|.||+++++..+.|.||+.+..
T Consensus 189 ~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 189 IETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 23569999999999999876679999999864
No 419
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.47 E-value=0.00039 Score=76.55 Aligned_cols=125 Identities=15% Similarity=0.141 Sum_probs=80.0
Q ss_pred CCceeecccCceeEEecccc---------CcHHHHHHHHHHHHccCCcc--ccceeeecccCCCCCcceEEEEEEecCCC
Q 002376 664 SHENLIGSGSFGSVLHNERT---------GSWKSFIAECETLRNVRHRN--LVKLITSCSSLDSKNMEFLALVYEFLSNG 732 (929)
Q Consensus 664 ~~~~~iG~G~~g~Vy~~~~~---------~~~~~~~~E~~~l~~l~Hpn--iv~l~~~~~~~~~~~~~~~~lV~e~~~~g 732 (929)
...+.++.|....||+.... .....+.+|+.+++.+.... +.++++++...+ +..|+||||++|.
T Consensus 44 ~~i~~l~gG~~n~~y~v~~~g~~~vlK~~~~~~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~----g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDVGGRGYVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSE----SLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEEEECSSEEEEEEEETTEEEEEEEESCCHHHHHHHHHHHHHCCSSSCCCCEEEEEESSS----SCEEEEEECCCSE
T ss_pred ceEEECCCCCcceEEEEEECCcEEEEEeCCchhhHHHHHHHHHHHHhcCCCCceEEEeccCCC----CCeEEEEEecCCC
Confidence 34567888888888876432 12346899999999986533 445666554321 3479999999986
Q ss_pred Ccccccc-ccccccccHHHHHHHhhhC-----------------------------------------------------
Q 002376 733 SLGDWIH-GERKNELDITSALDYLHND----------------------------------------------------- 758 (929)
Q Consensus 733 sL~~~l~-~~~~~~~~ia~aL~yLH~~----------------------------------------------------- 758 (929)
.+.+.-. .......++++.|+-||+.
T Consensus 120 ~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 199 (362)
T 3ovc_A 120 TLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQAL 199 (362)
T ss_dssp ETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHH
Confidence 6643211 0111122333333333321
Q ss_pred ---------C--CCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 759 ---------C--EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 759 ---------~--~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
. .+.++|+|+.+.||++++++.+.|.||+.+..-
T Consensus 200 ~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 200 DELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 1 145799999999999988778889999998753
No 420
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.42 E-value=5.9e-05 Score=72.89 Aligned_cols=34 Identities=15% Similarity=0.050 Sum_probs=17.5
Q ss_pred cccEEEeeCCCCCcccCccccCCCCCCEEEecCC
Q 002376 378 SLTLLDLSYNSISGEIPIEIGQLQGLQVLGLAGN 411 (929)
Q Consensus 378 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 411 (929)
.|+.|||+++.|+..--..+.++++|+.|+|+++
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4555555555555443334445555555555555
No 421
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.36 E-value=0.00028 Score=74.93 Aligned_cols=62 Identities=15% Similarity=-0.004 Sum_probs=47.0
Q ss_pred CceeecccCceeEEecccc------------C---cHHHHHHHHHHHHccCCc---cccceeeecccCCCCCcceEEEEE
Q 002376 665 HENLIGSGSFGSVLHNERT------------G---SWKSFIAECETLRNVRHR---NLVKLITSCSSLDSKNMEFLALVY 726 (929)
Q Consensus 665 ~~~~iG~G~~g~Vy~~~~~------------~---~~~~~~~E~~~l~~l~Hp---niv~l~~~~~~~~~~~~~~~~lV~ 726 (929)
..+.||.|.++.||+.+.. . ....|.+|++.|+.+++. .+.+++++. . .++||
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~---~------~~lvm 89 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---D------RTLAM 89 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---T------TEEEE
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec---C------cEEEE
Confidence 3578999999999987532 1 126789999999999875 466777653 1 48999
Q ss_pred EecCCCCcc
Q 002376 727 EFLSNGSLG 735 (929)
Q Consensus 727 e~~~~gsL~ 735 (929)
||++++.+.
T Consensus 90 e~l~g~~~~ 98 (288)
T 3d1u_A 90 EWVDERPPT 98 (288)
T ss_dssp ECCCCCCCC
T ss_pred EecccCCCC
Confidence 999998764
No 422
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.36 E-value=4.9e-05 Score=73.46 Aligned_cols=83 Identities=12% Similarity=0.079 Sum_probs=56.3
Q ss_pred cccEEEecCCccccccCCCCCCCCcccEEEeeCCC-CCcccCccccCC----CCCCEEEecCCc-CCCCCcccccCCCCC
Q 002376 354 ELSKLYLGGNHIYGKIPASIGRLRSLTLLDLSYNS-ISGEIPIEIGQL----QGLQVLGLAGNE-IPGGIPNSLANLKKL 427 (929)
Q Consensus 354 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~L 427 (929)
.|+.||++++.|+..--..+.++++|++|+|++|. |++.--..+..+ ++|++|+|+++. |+..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 58888888888776555667788999999999985 775544445553 357777777764 654333445566666
Q ss_pred ceecccCcc
Q 002376 428 NQIDLSGNE 436 (929)
Q Consensus 428 ~~L~Ls~N~ 436 (929)
++|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666653
No 423
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.23 E-value=0.00038 Score=74.72 Aligned_cols=122 Identities=16% Similarity=0.141 Sum_probs=75.7
Q ss_pred ceeecccCceeEEecccc---------CcHHHHHHHHHHHHccCCc---cccceeeecccCCCCCcceEEEEEEecCCCC
Q 002376 666 ENLIGSGSFGSVLHNERT---------GSWKSFIAECETLRNVRHR---NLVKLITSCSSLDSKNMEFLALVYEFLSNGS 733 (929)
Q Consensus 666 ~~~iG~G~~g~Vy~~~~~---------~~~~~~~~E~~~l~~l~Hp---niv~l~~~~~~~~~~~~~~~~lV~e~~~~gs 733 (929)
.+.++.|....||+.... .....+.+|+++++.+.+. .+.+.+.++.. ..+..++||||++|..
T Consensus 24 v~~l~~G~~n~v~~vg~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~----~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 24 VESLGEGFRNYAILVNGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR----SDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEEECSSEEEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC----TTSCEEEEEECCCSEE
T ss_pred eeecCCCcceeEEEECCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc----CCCceEEEEeccCCeE
Confidence 356777877788765211 1245788999999999753 24455555431 1233689999999987
Q ss_pred cccccc------ccccccccHHHHHHHhhhC-------------------------------------------------
Q 002376 734 LGDWIH------GERKNELDITSALDYLHND------------------------------------------------- 758 (929)
Q Consensus 734 L~~~l~------~~~~~~~~ia~aL~yLH~~------------------------------------------------- 758 (929)
+.+..- .......++++.|+.||+.
T Consensus 100 l~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~ 179 (306)
T 3tdw_A 100 LGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSY 179 (306)
T ss_dssp CHHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHH
T ss_pred CchhhhhhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHH
Confidence 765210 0011122222333333221
Q ss_pred --------CCCCEEecCCCCCCeeecC---CCc-eEEeccccccc
Q 002376 759 --------CEVPVVHSDLKPGNILLDE---EMT-AKVGDFGLARF 791 (929)
Q Consensus 759 --------~~~~iiHrDlk~~NILl~~---~~~-~ki~DfGla~~ 791 (929)
..+.++|+|+++.||++++ ++. +.|.||+.+..
T Consensus 180 l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 180 MTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2346899999999999987 455 58999998764
No 424
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=96.88 E-value=0.00086 Score=70.39 Aligned_cols=101 Identities=13% Similarity=0.061 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHccC-CccccceeeecccCCCCCcceEEEEEEecCCCCccccccc----cccccccHH-----------
Q 002376 686 WKSFIAECETLRNVR-HRNLVKLITSCSSLDSKNMEFLALVYEFLSNGSLGDWIHG----ERKNELDIT----------- 749 (929)
Q Consensus 686 ~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~----~~~~~~~ia----------- 749 (929)
...+.+|...|+.+. +--|-++++++.+. +..++|||++++.++.+.... ......+++
T Consensus 63 ~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~-----~~~~lvme~l~G~~~~~~~~~~~~~~~~~~~~l~~~L~~Lh~~~~ 137 (272)
T 4gkh_A 63 ANDVTDEMVRLNWLTAFMPLPTIKHFIRTP-----DDAWLLTTAIPGKTAFQVLEEYPDSGENIVDALAVFLRRLHSIPV 137 (272)
T ss_dssp HHHHHHHHHHHHHHTTTSCCCCEEEEEEET-----TEEEEEEECCCSEEHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCG
T ss_pred HhHHHHHHHHHHHhccCCCcCeEEEEEEEC-----CeEEEEEEeeCCccccccccCCHHHHHHHHHHHHHHHHHhcCCCc
Confidence 456889999998885 22355677776443 347999999998766543210 001111222
Q ss_pred ----------------------------------------HHHHHhhhCC----CCCEEecCCCCCCeeecCCCceEEec
Q 002376 750 ----------------------------------------SALDYLHNDC----EVPVVHSDLKPGNILLDEEMTAKVGD 785 (929)
Q Consensus 750 ----------------------------------------~aL~yLH~~~----~~~iiHrDlk~~NILl~~~~~~ki~D 785 (929)
...+.+.... .+.++|+|+.+.||++++++.+-|.|
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viD 217 (272)
T 4gkh_A 138 CNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCID 217 (272)
T ss_dssp GGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECC
T ss_pred ccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEE
Confidence 2233333221 23479999999999999887778999
Q ss_pred cccccc
Q 002376 786 FGLARF 791 (929)
Q Consensus 786 fGla~~ 791 (929)
|+.+..
T Consensus 218 we~a~~ 223 (272)
T 4gkh_A 218 VGRVGI 223 (272)
T ss_dssp CTTCEE
T ss_pred Cccccc
Confidence 998864
No 425
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.72 E-value=0.00033 Score=68.98 Aligned_cols=62 Identities=11% Similarity=0.198 Sum_probs=29.7
Q ss_pred CcCcceeeccccccccc----CCccccCCCCCCEEECCCCc---CCC----cCCcccccCCCCCeEeCCCCcC
Q 002376 504 CKSLEELLMAYNQFSGP----IPNIVAELKGLEVLDLSSNK---LSG----SIPSDLQNLQALRSLNLTFNNL 565 (929)
Q Consensus 504 l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~---l~~----~~p~~~~~l~~L~~L~Ls~N~l 565 (929)
-+.|+.|+|++|+|+.. +-..+..-+.|+.|+|++|. +.. .+-..+..-+.|+.|+++.|..
T Consensus 97 N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 97 SPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp CSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred CCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 34444444444444321 22334444556666666542 221 1223344456677777766553
No 426
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.68 E-value=0.00041 Score=68.30 Aligned_cols=16 Identities=38% Similarity=0.455 Sum_probs=8.0
Q ss_pred CCCCCCEEECCCCcCC
Q 002376 527 ELKGLEVLDLSSNKLS 542 (929)
Q Consensus 527 ~l~~L~~L~Ls~N~l~ 542 (929)
.-+.|+.|+|++|.|.
T Consensus 96 ~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 96 TSPSLRVLNVESNFLT 111 (197)
T ss_dssp HCSSCCEEECCSSBCC
T ss_pred cCCccCeEecCCCcCC
Confidence 3344555555555554
No 427
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.58 E-value=0.0029 Score=58.12 Aligned_cols=34 Identities=29% Similarity=0.239 Sum_probs=13.1
Q ss_pred CcEEeCCCCCCCCCcccccccccccceecccccc
Q 002376 121 LRVLNISFNNLQGELPVNISKLTELKMLDLMANK 154 (929)
Q Consensus 121 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 154 (929)
|++|+|++|+|+...+..|..+++|++|+|++|.
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP 66 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANP 66 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCC
Confidence 3344444444433333333333333444443333
No 428
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.58 E-value=0.003 Score=58.00 Aligned_cols=35 Identities=34% Similarity=0.365 Sum_probs=19.1
Q ss_pred CCCEEECCCCcCCCcCCcccccCCCCCeEeCCCCc
Q 002376 530 GLEVLDLSSNKLSGSIPSDLQNLQALRSLNLTFNN 564 (929)
Q Consensus 530 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 564 (929)
+|+.|||++|+|+...+..|..+++|+.|+|++|.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP 66 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANP 66 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCC
Confidence 45666666666665444455555555555444333
No 429
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=96.53 E-value=0.0026 Score=69.10 Aligned_cols=32 Identities=31% Similarity=0.383 Sum_probs=28.5
Q ss_pred CCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 760 ~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
.+.++|+|+++.||+++.++.+.|.||+.+..
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 45899999999999998888999999998763
No 430
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=96.38 E-value=0.002 Score=70.64 Aligned_cols=32 Identities=22% Similarity=0.347 Sum_probs=27.1
Q ss_pred CCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 760 ~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
.+.++|+|+.+.||+++++..+.|.||+.+..
T Consensus 221 ~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~ 252 (357)
T 3ats_A 221 EPVLLWGDARVGNVLYRDFQPVAVLDWEMVAL 252 (357)
T ss_dssp CCEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred CceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence 34789999999999999654578999998874
No 431
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.29 E-value=0.0087 Score=63.97 Aligned_cols=64 Identities=17% Similarity=0.112 Sum_probs=45.6
Q ss_pred ceeecccCceeEEecccc-----------CcHHHHHHHHHHHHccC---CccccceeeecccCCCCCcceEEEEEEecCC
Q 002376 666 ENLIGSGSFGSVLHNERT-----------GSWKSFIAECETLRNVR---HRNLVKLITSCSSLDSKNMEFLALVYEFLSN 731 (929)
Q Consensus 666 ~~~iG~G~~g~Vy~~~~~-----------~~~~~~~~E~~~l~~l~---Hpniv~l~~~~~~~~~~~~~~~~lV~e~~~~ 731 (929)
.+.|+.|....+|+.... .....|.+|.+.|+.+. ...+.++++++... +..++||||+++
T Consensus 41 ~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~-----g~~~lvme~l~G 115 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDEVQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQ-----GHSFLLLEALNK 115 (312)
T ss_dssp EEEECCSSSSEEEEEESSSCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECS-----SEEEEEEECCCC
T ss_pred eEEeCCccceeeeEEEECCCeEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecC-----CceEEEEEeccC
Confidence 456788888888775432 23457889999998884 25577777776432 347999999998
Q ss_pred CCc
Q 002376 732 GSL 734 (929)
Q Consensus 732 gsL 734 (929)
..+
T Consensus 116 ~~~ 118 (312)
T 3jr1_A 116 SKN 118 (312)
T ss_dssp CCC
T ss_pred CCC
Confidence 765
No 432
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=96.12 E-value=0.0088 Score=66.55 Aligned_cols=31 Identities=32% Similarity=0.434 Sum_probs=26.4
Q ss_pred CCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 761 ~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
+.++|+|+.+.||+++++ .+++.||..+...
T Consensus 227 ~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~G 257 (397)
T 2olc_A 227 ETLIHGDLHTGSIFASEH-ETKVIDPEFAFYG 257 (397)
T ss_dssp CEEECSCCSGGGEEECSS-CEEECCCTTCEEE
T ss_pred CceeeCCCCcCcEEEeCC-CeEEEeCcccccC
Confidence 478999999999999876 4899999887743
No 433
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=95.80 E-value=0.018 Score=61.92 Aligned_cols=141 Identities=20% Similarity=0.145 Sum_probs=78.0
Q ss_pred CCChHHHHHhhCCCCC-----ceeecccCceeEEecccc----------C--cHHHHHHHHHHHHccCCcc--ccceeee
Q 002376 650 KISYDELRRATGNFSH-----ENLIGSGSFGSVLHNERT----------G--SWKSFIAECETLRNVRHRN--LVKLITS 710 (929)
Q Consensus 650 ~~~~~~l~~~~~~~~~-----~~~iG~G~~g~Vy~~~~~----------~--~~~~~~~E~~~l~~l~Hpn--iv~l~~~ 710 (929)
.++.+++......|.. .+.|+.|....||+.... . ..+.+..|+.+++.+.... +.+++..
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g~~vP~~~~~ 85 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSCPLPLPR 85 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCCEEEEEECC---CCHHHHHHHHHHHHHHTTCCCCCBCCB
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCccEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCCCCcccCC
Confidence 4566666666666654 234666777777765421 1 2346778888888774322 2333322
Q ss_pred cccCCC--CCcceEEEEEEecCCCCcccc--------------ccc-------cc----c-----------------cc-
Q 002376 711 CSSLDS--KNMEFLALVYEFLSNGSLGDW--------------IHG-------ER----K-----------------NE- 745 (929)
Q Consensus 711 ~~~~~~--~~~~~~~lV~e~~~~gsL~~~--------------l~~-------~~----~-----------------~~- 745 (929)
. +... ...+..++||||++|..+... +|. .. . ..
T Consensus 86 ~-~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 164 (322)
T 2ppq_A 86 K-DGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK 164 (322)
T ss_dssp T-TCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred C-CCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhh
Confidence 1 0000 011346899999998654321 110 00 0 00
Q ss_pred ---ccHHHHHHHhhhC----CCCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 746 ---LDITSALDYLHND----CEVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 746 ---~~ia~aL~yLH~~----~~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..+...+++++.. .+..++|+|+.+.||+++++..+.|.||+.+..
T Consensus 165 ~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 165 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 0133445555532 234789999999999999876668999998763
No 434
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=95.17 E-value=0.032 Score=58.82 Aligned_cols=63 Identities=14% Similarity=0.004 Sum_probs=41.8
Q ss_pred CCceeecccCceeEEecccc---------------CcHHHHHHHHHHHHccCCc---cccceeeecccCCCCCcceEEEE
Q 002376 664 SHENLIGSGSFGSVLHNERT---------------GSWKSFIAECETLRNVRHR---NLVKLITSCSSLDSKNMEFLALV 725 (929)
Q Consensus 664 ~~~~~iG~G~~g~Vy~~~~~---------------~~~~~~~~E~~~l~~l~Hp---niv~l~~~~~~~~~~~~~~~~lV 725 (929)
...+.+|.|..+.||+.+.. .....|.+|++.|+.+.-. -+.+++++. + -++|
T Consensus 18 ~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~---~------~~lv 88 (288)
T 3f7w_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---D------RTLA 88 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---T------TEEE
T ss_pred EEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc---C------ceEE
Confidence 34567899999999986543 1124688999999988532 244444442 1 2889
Q ss_pred EEecCCCCcc
Q 002376 726 YEFLSNGSLG 735 (929)
Q Consensus 726 ~e~~~~gsL~ 735 (929)
|||++++...
T Consensus 89 ~e~l~~~~~~ 98 (288)
T 3f7w_A 89 MEWVDERPPT 98 (288)
T ss_dssp EECCCCCCCC
T ss_pred EEeecccCCC
Confidence 9999876543
No 435
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=94.89 E-value=0.034 Score=62.28 Aligned_cols=32 Identities=19% Similarity=0.412 Sum_probs=28.0
Q ss_pred CCCEEecCCCCCCeeecCCCceEEecccccccc
Q 002376 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARFL 792 (929)
Q Consensus 760 ~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~~ 792 (929)
.+.++|+|++|.||++++++ ++|.||+.+..-
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G 262 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG 262 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence 34799999999999999876 999999998754
No 436
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=94.79 E-value=0.028 Score=59.79 Aligned_cols=118 Identities=13% Similarity=0.091 Sum_probs=68.3
Q ss_pred ceeecccCceeEEecccc-----C-cH---HHHHHHHHHHHccCCccc-cceeeecccCCCCCcceEEEEEEec-CCCCc
Q 002376 666 ENLIGSGSFGSVLHNERT-----G-SW---KSFIAECETLRNVRHRNL-VKLITSCSSLDSKNMEFLALVYEFL-SNGSL 734 (929)
Q Consensus 666 ~~~iG~G~~g~Vy~~~~~-----~-~~---~~~~~E~~~l~~l~Hpni-v~l~~~~~~~~~~~~~~~~lV~e~~-~~gsL 734 (929)
.+.|+.|....+|+...- + .. ....+|+.+++.+....+ .++++++.+ . -++|+||+ ++.++
T Consensus 23 i~~l~gG~tN~~~~~~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~~~~--~-----~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 23 PLERLGGLTNLVFRAGDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHVDPA--T-----GVMVTRYIAGAQTM 95 (301)
T ss_dssp CEEEESCSSEEEEEETTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEECTT--T-----CCEEEECCTTCEEC
T ss_pred eeEcCCccccccceeeeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEEECC--C-----CEEEEeecCCCccC
Confidence 567888888888876110 1 11 123568888877743333 355554321 1 27899999 65455
Q ss_pred cccc-cccccccccHHHHHHHhhhC--------------------------------------------------CCCCE
Q 002376 735 GDWI-HGERKNELDITSALDYLHND--------------------------------------------------CEVPV 763 (929)
Q Consensus 735 ~~~l-~~~~~~~~~ia~aL~yLH~~--------------------------------------------------~~~~i 763 (929)
...- ........++++.|+-+|+. .++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l 175 (301)
T 3dxq_A 96 SPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAA 175 (301)
T ss_dssp CHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCEE
T ss_pred CHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCcee
Confidence 3210 00011223333344444431 12348
Q ss_pred EecCCCCCCeeecCCCceEEeccccccc
Q 002376 764 VHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 764 iHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
+|+|+.+.||+ .+++.+.+.||..+..
T Consensus 176 ~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 176 CHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp ECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eccCCCcCCEE-ECCCCEEEEecccccC
Confidence 99999999999 5566789999998864
No 437
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=93.96 E-value=0.11 Score=55.75 Aligned_cols=30 Identities=33% Similarity=0.366 Sum_probs=25.6
Q ss_pred CCCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 760 EVPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 760 ~~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
...++|+|+++.||+++ + .+.|.||+.+..
T Consensus 194 ~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 194 TVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 34689999999999999 4 899999998763
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=93.86 E-value=0.047 Score=61.25 Aligned_cols=39 Identities=23% Similarity=0.301 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHccCCccc-cceeeecccCCCCCcceEEEEEEecCCCCc
Q 002376 687 KSFIAECETLRNVRHRNL-VKLITSCSSLDSKNMEFLALVYEFLSNGSL 734 (929)
Q Consensus 687 ~~~~~E~~~l~~l~Hpni-v~l~~~~~~~~~~~~~~~~lV~e~~~~gsL 734 (929)
..+.+|..+++.+...++ .++++++. . .+||||++|.++
T Consensus 120 ~~li~E~~~l~~L~~~g~~P~l~~~~~----~-----g~v~e~l~G~~l 159 (429)
T 1nw1_A 120 SHLVAESVIFTLLSERHLGPKLYGIFS----G-----GRLEEYIPSRPL 159 (429)
T ss_dssp HHHHHHHHHHHHHHHTTSSSCEEEEET----T-----EEEECCCCEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeC----C-----CEEEEEeCCccc
Confidence 567789999988853333 55666542 1 389999986444
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=93.39 E-value=0.11 Score=56.97 Aligned_cols=31 Identities=35% Similarity=0.545 Sum_probs=27.3
Q ss_pred CCEEecCCCCCCeeecCC----CceEEeccccccc
Q 002376 761 VPVVHSDLKPGNILLDEE----MTAKVGDFGLARF 791 (929)
Q Consensus 761 ~~iiHrDlk~~NILl~~~----~~~ki~DfGla~~ 791 (929)
..++|+|+.+.||+++++ +.+.+.||..|..
T Consensus 220 ~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 220 VVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp EEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred cEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 468999999999999876 7899999998874
No 440
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=92.37 E-value=0.17 Score=54.47 Aligned_cols=32 Identities=31% Similarity=0.399 Sum_probs=27.7
Q ss_pred CCCEEecCCCCCCeeecCC----CceEEeccccccc
Q 002376 760 EVPVVHSDLKPGNILLDEE----MTAKVGDFGLARF 791 (929)
Q Consensus 760 ~~~iiHrDlk~~NILl~~~----~~~ki~DfGla~~ 791 (929)
.+.++|||+.+.||+++++ +.+.|.||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 3479999999999999874 6899999998874
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=91.83 E-value=0.21 Score=56.28 Aligned_cols=36 Identities=17% Similarity=0.168 Sum_probs=24.8
Q ss_pred HHHHHHHHccCCccc-cceeeecccCCCCCcceEEEEEEecCCCCc
Q 002376 690 IAECETLRNVRHRNL-VKLITSCSSLDSKNMEFLALVYEFLSNGSL 734 (929)
Q Consensus 690 ~~E~~~l~~l~Hpni-v~l~~~~~~~~~~~~~~~~lV~e~~~~gsL 734 (929)
.+|..+++.+...++ .++++++. . .+||||+++.++
T Consensus 152 ~~E~~vl~~L~~~gl~P~ll~~~~----~-----G~v~e~I~G~~l 188 (458)
T 2qg7_A 152 EREKKISCILYNKNIAKKIYVFFT----N-----GRIEEFMDGYAL 188 (458)
T ss_dssp HHHHHHHHHHTTSSSBCCEEEEET----T-----EEEEECCCSEEC
T ss_pred HHHHHHHHHHHhcCCCCCEEEEeC----C-----eEEEEeeCCccC
Confidence 589999999865444 45666651 1 359999987554
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=91.49 E-value=0.13 Score=56.30 Aligned_cols=30 Identities=27% Similarity=0.490 Sum_probs=25.1
Q ss_pred CCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 761 ~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..++|+|+++.|||++++. +.+.||..+..
T Consensus 212 ~~l~HgDl~~~Nil~~~~~-~~lID~e~a~~ 241 (369)
T 3c5i_A 212 IVFCHNDLQENNIINTNKC-LRLIDFEYSGF 241 (369)
T ss_dssp EEEECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred eEEEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence 4689999999999998665 89999998764
No 443
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=89.17 E-value=0.52 Score=33.30 Aligned_cols=29 Identities=7% Similarity=0.044 Sum_probs=11.7
Q ss_pred ehhhHHHHHHHHHHHHhhhhhhhhccccc
Q 002376 608 LSIIVTIMAVIAGCFLIVWPIIVRKRKAK 636 (929)
Q Consensus 608 i~i~~~~~~~l~~~~~~~~~~~~rrr~~~ 636 (929)
++..+++..++++++...+++++|+|+.+
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 33333333333333334444445554443
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.79 E-value=0.41 Score=52.65 Aligned_cols=31 Identities=35% Similarity=0.481 Sum_probs=27.2
Q ss_pred CCEEecCCCCCCeeecCC------CceEEeccccccc
Q 002376 761 VPVVHSDLKPGNILLDEE------MTAKVGDFGLARF 791 (929)
Q Consensus 761 ~~iiHrDlk~~NILl~~~------~~~ki~DfGla~~ 791 (929)
..++|+|+.+.||+++++ +.+.+.||..|..
T Consensus 244 ~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred eeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 467899999999999876 7899999998864
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=82.60 E-value=0.65 Score=51.55 Aligned_cols=30 Identities=20% Similarity=0.424 Sum_probs=26.6
Q ss_pred CCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 761 ~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..++|+|+.+.||+ ++++.+.+.||..|..
T Consensus 262 ~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 262 LVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp EEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred ceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 46899999999999 8888999999998874
No 446
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=80.71 E-value=1.2 Score=31.35 Aligned_cols=13 Identities=23% Similarity=0.644 Sum_probs=5.6
Q ss_pred hhhhhhhhccccc
Q 002376 624 IVWPIIVRKRKAK 636 (929)
Q Consensus 624 ~~~~~~~rrr~~~ 636 (929)
..+++++|+|+.+
T Consensus 28 ~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 28 LTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHTTCSS
T ss_pred HHHHHHhhhhhhh
Confidence 3444444444433
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=71.83 E-value=3.7 Score=45.09 Aligned_cols=29 Identities=34% Similarity=0.571 Sum_probs=24.9
Q ss_pred EEecCCCCCCeee------cCCCceEEeccccccc
Q 002376 763 VVHSDLKPGNILL------DEEMTAKVGDFGLARF 791 (929)
Q Consensus 763 iiHrDlk~~NILl------~~~~~~ki~DfGla~~ 791 (929)
++|+|+.+.||++ +++..+++.||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5699999999999 4566899999998864
No 448
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=67.93 E-value=4.8 Score=28.31 Aligned_cols=18 Identities=22% Similarity=0.508 Sum_probs=8.0
Q ss_pred HHHHHhhhhhhhhccccc
Q 002376 619 AGCFLIVWPIIVRKRKAK 636 (929)
Q Consensus 619 ~~~~~~~~~~~~rrr~~~ 636 (929)
++++.++++++.|||+.+
T Consensus 24 ~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 24 VVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHhheehhhhh
Confidence 333344444455555443
No 449
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=62.65 E-value=2.4 Score=45.47 Aligned_cols=31 Identities=26% Similarity=0.440 Sum_probs=27.7
Q ss_pred CCEEecCCCCCCeeecCCCceEEeccccccc
Q 002376 761 VPVVHSDLKPGNILLDEEMTAKVGDFGLARF 791 (929)
Q Consensus 761 ~~iiHrDlk~~NILl~~~~~~ki~DfGla~~ 791 (929)
..++|+|+.+.||++++++.+.|.||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999888899999988764
No 450
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=49.69 E-value=29 Score=29.34 Aligned_cols=16 Identities=0% Similarity=0.092 Sum_probs=6.9
Q ss_pred CChhhhccCCCCcEEE
Q 002376 159 VTDDQLRNLRSLQVLN 174 (929)
Q Consensus 159 i~~~~~~~l~~L~~L~ 174 (929)
|...+|.++++|+.+.
T Consensus 11 I~~~aF~~c~~L~~i~ 26 (100)
T 2lz0_A 11 MDKSLFAGNTVIREIT 26 (100)
T ss_dssp SCSCTTTTCTTCCCEE
T ss_pred ecHHHhcCCCCCcEEE
Confidence 3334444444444443
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=37.42 E-value=39 Score=28.56 Aligned_cols=46 Identities=13% Similarity=0.106 Sum_probs=33.8
Q ss_pred ccccCCCccCCCCcccEEEeecccCCCccCCccccCCCCceEEeeec
Q 002376 188 IANLIPSDLSRLENLKVLDLTINRLAGTVPSTIYNMTSLVHLRLASN 234 (929)
Q Consensus 188 i~~l~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 234 (929)
+..+-...|.++++|+.+.|-.+ ++.+...+|.++.+|+.+.+...
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 44455567888888888888754 66677778888888888877653
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=33.32 E-value=8.8 Score=42.98 Aligned_cols=44 Identities=9% Similarity=0.068 Sum_probs=12.8
Q ss_pred ceeecccCceeEEeccccCc------------------------HHHHHHHHHHHHccCCccccceeeecc
Q 002376 666 ENLIGSGSFGSVLHNERTGS------------------------WKSFIAECETLRNVRHRNLVKLITSCS 712 (929)
Q Consensus 666 ~~~iG~G~~g~Vy~~~~~~~------------------------~~~~~~E~~~l~~l~Hpniv~l~~~~~ 712 (929)
.+.+| ||.||+|.+... .+.|.+|..+++..+|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 35566 999988776421 135778888888899999999988764
Done!