BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002378
(929 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6AXC6|DDX11_MOUSE Probable ATP-dependent RNA helicase DDX11 OS=Mus musculus GN=Ddx11
PE=2 SV=1
Length = 880
Score = 508 bits (1308), Expect = e-143, Method: Compositional matrix adjust.
Identities = 324/948 (34%), Positives = 496/948 (52%), Gaps = 145/948 (15%)
Query: 22 IQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQKYETMIKS 81
IQ DFM LY LE G + + ESPTGTGK+LS+IC AL W+ D ++K+ Q + S
Sbjct: 22 IQKDFMAELYKVLEGGKIGIFESPTGTGKSLSLICGALSWLRDFEKKKLQAEALLLAPGS 81
Query: 82 ------DHSFTNNGDCSSND-------EPDWMRNFVVNRDFQAEDAKIKKKKNGCGLGKT 128
+S + C EPDW+ FV ++ E +++ + +
Sbjct: 82 GPPSSEKNSLLTSSSCQEPTDTPRPAGEPDWVTEFVQKKE---ERDLVERLREEQKHEEE 138
Query: 129 GERKHREISTDTFSHSMEKDKCFTKKECENLQSINDQSELSDEEFLLEEYESEEEGAIGG 188
+S + ++ +Q E +E +L EYES+EE
Sbjct: 139 ETEALLRLSREMLDAGTGPEQL-------------EQLECGEEHLVLAEYESDEE----- 180
Query: 189 GKSKRKAGAGTISSSSDEEEEDGLDEEGEEVLKVYFCSRTHSQLSQFIKELRKTVFANEI 248
+ G+ + D EEE + K+Y+CSRTHSQL+QF++E+ K+ F E
Sbjct: 181 -----RRGSRVDEAEDDLEEE--------HITKIYYCSRTHSQLAQFVREVLKSPFGKET 227
Query: 249 KVVCLGSRKNFCINEEVLRLGNSTHINERCLELQNKKKNEICKIKNLGAEGKVRR--TKA 306
++V LGSR+ C+NE+V LG+ +N+RC+++Q K+ KN E K +R K
Sbjct: 228 RLVSLGSRQTLCVNEDVKNLGSVQLMNDRCVDMQRSKRE-----KNGTGEDKPKRKRQKI 282
Query: 307 FSGCPVLRSHKLQKGFRNEISQQGALDIEDLVHLGRHMRTCPYYGSRSMVPTADLVVLPY 366
+ CP +H+ + R+EI + D+E LV LG+ R CPYYGSR +P A LVVLPY
Sbjct: 283 QTSCP-FYNHEQMELLRDEILLE-VKDMEQLVALGKEARACPYYGSRFAIPAAQLVVLPY 340
Query: 367 QSLLSKSARESLGLNLKNNIVIIDEAHNLADSLINMYNAKITLSQLENVHSHLEKYFGRF 426
LL + R++ G+ L+ +VIIDEAHNL D++ N+++ ++ SQL HS L +Y R+
Sbjct: 341 PMLLHAATRQAAGIRLQGQVVIIDEAHNLIDTITNIHSTEVNGSQLCQAHSQLLQYMERY 400
Query: 427 CSLLGPGNRRYIQTLMVFTRAFLQVLLKEKDENDVRQDSENSTGAKHAFDSSVAINEFLF 486
L N YI+ ++ F+ VL +N Q S + TG++ +IN+FLF
Sbjct: 401 RKRLKAKNLMYIKQILYLLEKFVAVLGGNVKQNPTTQ-SLSQTGSELK-----SINDFLF 454
Query: 487 SLNIDNINLVKLLKYIKESNIIHKVSGYGDKAASLQKGSVLKDGGENYEEGSILSGFQSL 546
+DNINL K+ +Y+++S + K+ G+ + G VL ++ +E L+GFQ
Sbjct: 455 QSQVDNINLFKVQRYLEKSMLSRKLFGFTECF-----GVVLPSLSDS-QENRGLAGFQQF 508
Query: 547 VD------------------------------MLISLTNNDGDGRIIISKARPISSGQQG 576
+ L +LT + DGR+I+++ G G
Sbjct: 509 LKSLQSGPTEDSPEEGQAVALRPASPLMHIEAFLAALTTANQDGRVIVNR-----QGSVG 563
Query: 577 QQGGYLKYVMLTGEKVFSEIVEQAHAVILAGGTLQPIEETRERLFPW--LSPNKFHFFSC 634
Q LK+++L F+++V++ AV++AGGT+QP+ + RE+L + + FSC
Sbjct: 564 QSS--LKFLLLNPAVHFAQVVKECRAVVIAGGTMQPMSDFREQLLACSGVEAGRVVEFSC 621
Query: 635 SHIVPPESILPVALSCGPTGKSFDFSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPS 694
H++PP++ILP+ + GP+ + +F+Y R M+EE G +LCNL +VVP G++ F PS
Sbjct: 622 GHVIPPDNILPLIICSGPSNQQLEFTYQRRELPQMVEETGRILCNLCNVVPGGVVCFLPS 681
Query: 695 FEYVERVYGAWKSLGILDRIMKKKHVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTP 754
+EY+ +V+ W G+L R+ +K +F+EP+ + VE VL Y K I + S
Sbjct: 682 YEYLRQVHAHWDKTGLLTRLSVRKKIFQEPKRASQVEQVLMAYSKCIMSCS----HSEGH 737
Query: 755 LNGAMLLAVVGGKISEGINFSDGMGRCIVMVGLPYPSPSNIELLERIKHI-EGLGDTNSK 813
L GA+LL+VVGGK+SEGINFSD +GRC+VMVG+PYP+ + EL E++ ++ + L T +
Sbjct: 738 LTGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMAYLNQTLPRTQGQ 797
Query: 814 TLNTSASDAYYNGDAQAGFGILRSCRGRGKEYYENLCMKAVNQSIGRAIRHINDHAAILL 873
L G ENLCMKA+NQSIGRAIRH D A+I+L
Sbjct: 798 PLP-------------------------GTVLIENLCMKAINQSIGRAIRHQRDFASIVL 832
Query: 874 VDLRYASESSKRSCSHPANKLPRWIKDRLVSSTNNYGEVHRLLHQFFK 921
+D RYA S KLP WI+DR V +G + +F +
Sbjct: 833 LDHRYARPSI-------LAKLPAWIRDR-VEVKATFGPAFAAVRKFHR 872
>sp|A8MPP1|D11L8_HUMAN Putative ATP-dependent RNA helicase DDX11-like protein 8 OS=Homo
sapiens GN=DDX11L8 PE=3 SV=1
Length = 907
Score = 506 bits (1304), Expect = e-142, Method: Compositional matrix adjust.
Identities = 318/965 (32%), Positives = 496/965 (51%), Gaps = 156/965 (16%)
Query: 3 EKEREAEAEFPAFPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWV 62
E ++ FP FP+ PYSIQ DFM LY LE G + + ESPTGTGK+LS+IC AL W+
Sbjct: 4 ETQKVGAIHFP-FPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWL 62
Query: 63 VD--QKQKQKQKQKYETMIKSDHSFTNNGDCSSND------------EPDWMRNFVVNRD 108
D QK+++++ + ET H + C S+ EP W+ FV ++
Sbjct: 63 RDFEQKKREEEARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKE 122
Query: 109 FQAEDAKIKKKKNGCGLGKTGERKHREISTDTFSHSMEKDKCFTK-----KECENLQSIN 163
+ ++K ++ RK RE H ++ + +E ENL ++
Sbjct: 123 ERDLVDRLKVEQ--------ARRKQREERLQQLQHRVQLKYAAKRLRQEEEETENLLRLS 174
Query: 164 -------------DQSELSDEEFLLEEYESEEEGAIGGGKSKRKAGAGTISSSSDEEEED 210
+Q E +EE +L EYES+EE + G +
Sbjct: 175 REMLETGPEAERLEQLESGEEELVLAEYESDEEKKVASGHRVDEDEDDLEEE-------- 226
Query: 211 GLDEEGEEVLKVYFCSRTHSQLSQFIKELRKTVFANEIKVVCLGSRKNFCINEEVLRLGN 270
+ K+Y CSRTHSQL+QF+ E++K+ F ++++V LGSR+N C+NE+V LG+
Sbjct: 227 -------HITKIYHCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVRSLGS 279
Query: 271 STHINERCLELQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQG 330
IN+RC+++Q + + K + K RR + + CP +H+ Q G + +
Sbjct: 280 VQLINDRCVDMQRSRHEK--KKGAEEEKPKRRRQEKQAACP-FYNHE-QMGLLRDEALAE 335
Query: 331 ALDIEDLVHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIID 390
D+E L+ LG+ R CPYY SR +P A LVVLPYQ LL + R++ G+ L++ +VIID
Sbjct: 336 VKDMEQLLALGKEARACPYYRSRLAIPAAKLVVLPYQMLLHAATRQAAGIRLQDQVVIID 395
Query: 391 EAHNLADSLINMYNAKITLSQLENVHSHLEKYFGRFCSLLGPGNRRYIQTLMVFTRAFLQ 450
EAHNL D++ M++ +++ SQL HS L +Y R+ L N Y++ ++ F+
Sbjct: 396 EAHNLIDTITGMHSVEVSGSQLCQAHSQLLQYMERYGKRLKAKNLMYLKQILYLLEKFVA 455
Query: 451 VLLKEKDENDVRQD-SENSTGAKHAFDSSVAINEFLFSLNIDNINLVKLLKYIKESNIIH 509
VL +N Q S+ T K IN+FLF IDNINL K+ +Y ++S I
Sbjct: 456 VLGGNIKQNPNTQSLSQTGTELK-------TINDFLFQSQIDNINLFKVQRYCEKSMISR 508
Query: 510 KVSGYGDKAASLQKGSVLKDGGENYEEGSILSGFQSLVD--------------------- 548
K+ G+ ++ G+V E L+GFQ +
Sbjct: 509 KLFGFTER-----YGAVFSS-----REQPKLAGFQQFLQSLQPRTTEALAAPADESQASV 558
Query: 549 ------------MLISLTNNDGDGRIIISKARPISSGQQGQQGGYLKYVMLTGEKVFSEI 596
L +LT + DGR+I+S+ +S LK+++L F+++
Sbjct: 559 PQPASPLMHIEGFLAALTTANQDGRVILSRQGSLSE-------STLKFLLLNPAVHFAQV 611
Query: 597 VEQAHAVILAGGTLQPIEETRERLFPW--LSPNKFHFFSCSHIVPPESILPVALSCGPTG 654
V++ AV++AGGT+QP+ + R++L + + FSC H++PP++I P+ + G +
Sbjct: 612 VKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNI-PLVICSGISN 670
Query: 655 KSFDFSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRI 714
+ +F++ R M++E+G +LCNL VV G++ FF S+EY+ +V+ W+ G+L R+
Sbjct: 671 QPLEFTFQKRDLPQMMDEVGRILCNLCGVVSGGVVCFFSSYEYLRQVHAHWEKGGLLGRL 730
Query: 715 MKKKHVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINF 774
+K +F+EP+ VE VL Y + I ++ + A+LL+VVGGK+SEGINF
Sbjct: 731 AARKKIFQEPKSAHQVEQVLLAYSRCIQACG----QERGQVTEALLLSVVGGKMSEGINF 786
Query: 775 SDGMGRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGI 834
SD +GRC+VMVG+P+P+ + EL E++ +++ +TL + A
Sbjct: 787 SDNLGRCVVMVGMPFPNIRSAELQEKMAYLD-------QTLPRAPGQA------------ 827
Query: 835 LRSCRGRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKL 894
GK ENLCMKAVNQSIGRAIRH D A+I+L+D RYA KL
Sbjct: 828 -----PPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPV-------LAKL 875
Query: 895 PRWIK 899
P WI+
Sbjct: 876 PAWIR 880
>sp|Q92771|DDX12_HUMAN Putative ATP-dependent RNA helicase DDX12 OS=Homo sapiens GN=DDX12P
PE=5 SV=3
Length = 950
Score = 504 bits (1299), Expect = e-142, Method: Compositional matrix adjust.
Identities = 313/942 (33%), Positives = 494/942 (52%), Gaps = 148/942 (15%)
Query: 25 DFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWVVD--QKQKQKQKQKYETMIKSD 82
DFM LY LE G + + ESPTGTGK+LS+IC AL W+ D QK+++++ + ET
Sbjct: 44 DFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREEEARLLETGTGPL 103
Query: 83 HSFTNNGDCSSND------------EPDWMRNFV--------VNRDFQAEDAKIKKK--- 119
H + C S+ EP W+ FV VNR +AE A+ K++
Sbjct: 104 HDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVNR-LKAEQARRKQREER 162
Query: 120 ----KNGCGLGKTGERKHREISTDTFSHSMEKDKCFTKKECENLQSINDQSELSDEEFLL 175
++ L +R +E + ++ T E E +Q E +EE +L
Sbjct: 163 LQQLQHRVQLKYAAKRLRQEEEERENLLRLSREMLETGPEAER----PEQLESGEEELVL 218
Query: 176 EEYESEEEGAIGGGKSKRKAGAGTISSSSDEEEEDGLDEEGEEVLKVYFCSRTHSQLSQF 235
EYES+EE + G + + E + K+Y CSRTHSQL+QF
Sbjct: 219 AEYESDEEKKVASGVDEDEDDLEE-----------------EHITKIYHCSRTHSQLAQF 261
Query: 236 IKELRKTVFANEIKVVCLGSRKNFCINEEVLRLGNSTHINERCLELQNKKKNEICKIKNL 295
+ E++K+ F ++++V LGSR+N C+NE+V LG+ IN RC+++Q + + K
Sbjct: 262 VHEVKKSPFGKDVRLVSLGSRQNLCVNEDVRSLGSVQLINNRCVDMQRSRHEK--KKGAE 319
Query: 296 GAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDLVHLGRHMRTCPYYGSRSM 355
+ K RR + + CP +H+ Q G + + D+E L+ LG+ R CPYYGSR
Sbjct: 320 EEKPKRRRQEKQAACP-FYNHE-QMGLLRDEALAEVKDMEQLLALGKEARACPYYGSRLA 377
Query: 356 VPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNLADSLINMYNAKITLSQLENV 415
+P A LVVLPYQ LL + R++ G+ L++ +VIIDEAHNL D+ +M++ +++ SQL
Sbjct: 378 IPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTTTSMHSVEVSGSQLCQA 437
Query: 416 HSHLEKYFGRFCSLLGPGNRRYIQTLMVFTRAFLQVLLKEKDENDVRQDSENSTGAKHAF 475
HS L +Y R+ L N Y++ ++ F+ VL +++Q+ + ++
Sbjct: 438 HSQLLQYMERYGKRLKAKNLMYLKQILYLLEKFVAVL-----GGNIKQNPNTQSLSQTGM 492
Query: 476 DSSVAINEFLFSLNIDNINLVKLLKYIKESNIIHKVSGYGDKAASLQKGSVLKDGGENYE 535
+ IN+FLF IDNINL K+ +Y ++S I K+ G+ ++ G+V
Sbjct: 493 ELKT-INDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTER-----YGAVFSS-----R 541
Query: 536 EGSILSGFQSLVD---------------------------------MLISLTNNDGDGRI 562
E L+GFQ + L +LT + DGR+
Sbjct: 542 EQPKLAGFQQFLQSLQPRTTEALAAPADESQASVPQPASPLMHIEGFLAALTTANQDGRV 601
Query: 563 IISKARPISSGQQGQQGGYLKYVMLTGEKVFSEIVEQAHAVILAGGTLQPIEETRERLFP 622
I+S+ +S LK+++L F+++V++ AV++AGGT+QP+ R++L
Sbjct: 602 ILSRQGSLSQ-------STLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSNFRQQLLA 654
Query: 623 W--LSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFDFSYGSRSSSAMIEELGLLLCNL 680
+ + FSC H++PP++ILP+ + G + + +F++ R M++E+G +LCNL
Sbjct: 655 CAGVEAERVVEFSCGHVIPPDNILPLVICSGVSNQPLEFTFQKRDLPQMMDEVGRILCNL 714
Query: 681 VSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKKHVFREPRGNTHVESVLKEYQKT 740
VV G++ FFPS+EY+ +V+ W+ G+L R+ +K +F+EP+ VE VL Y +
Sbjct: 715 CGVVSGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYSRC 774
Query: 741 IDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGMGRCIVMVGLPYPSPSNIELLER 800
+ ++ P+ GA+LL+VVGGK+SEGINFSD +GRC+VMVG+P+P+ + EL E+
Sbjct: 775 LQACG----QERGPVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEK 830
Query: 801 IKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSCRGRGKEYYENLCMKAVNQSIGR 860
+ +++ +TL + A+ GK ENLCMKAVNQSIGR
Sbjct: 831 MAYLD-------QTLPRAPGQAH-----------------PGKALVENLCMKAVNQSIGR 866
Query: 861 AIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWIKDRL 902
AIRH D A+I+L+D RYA KLP WI+ R+
Sbjct: 867 AIRHQKDFASIVLLDQRYARPPV-------LAKLPAWIRARV 901
>sp|A1D8E4|CHL1_NEOFI ATP-dependent RNA helicase chl1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=chl1
PE=3 SV=1
Length = 861
Score = 497 bits (1279), Expect = e-139, Method: Compositional matrix adjust.
Identities = 332/933 (35%), Positives = 483/933 (51%), Gaps = 152/933 (16%)
Query: 16 PYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQKY 75
PY PY IQ FM+ALY LE G V++ ESPTGTGK+LS+IC ++ W+ + K+K Q
Sbjct: 11 PYSPYDIQLQFMRALYTCLEEGKVAVFESPTGTGKSLSLICGSMTWLREHKRKALQDT-- 68
Query: 76 ETMIKSDHSFTNNGDCSSND---EPDWMRNFVVNRDFQAEDAKIKKKKNGCGLGKTGERK 132
N CS+ D EP+WM F +A K + + K E K
Sbjct: 69 ----------VNKASCSAGDDDGEPEWMLEFAKRESARAVTEKRRALEARLEKIKVEEEK 118
Query: 133 HREI-STDTFSHSMEKDKCFTKKECENLQSINDQSELSDEEFLLEEYESEEEGAIGGGKS 191
R +TD + ++ + T S D + D++F+L++Y+S+ E I S
Sbjct: 119 QRHAHATDHPGEARKRQRLDT--------SSGDPGQEQDDQFILDDYDSDAEERIT--YS 168
Query: 192 KRKAGAGTISSSSDEEEE--------DGLDEEGEEV--LKVYFCSRTHSQLSQFIKELRK 241
K+ +S+S+ E E DE G E +K+++CSRTHSQLSQF ELR+
Sbjct: 169 KKLGDISGLSTSTLELLERFKEQFSASAEDETGHEDDDVKIFYCSRTHSQLSQFSSELRR 228
Query: 242 ------------TVFAN------EIKVVCLGSRKNFCINEEVLRLGNSTHINERCLELQN 283
T AN +K + LGSRKN CIN +V+ LGN+T INERCLELQ
Sbjct: 229 VKMPSSMPAELSTSDANTDDAEERVKHLTLGSRKNLCINPKVMSLGNATAINERCLELQQ 288
Query: 284 KKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHK-----LQKGFRNEISQQGALDIEDLV 338
+ AE + CP L S + LQ FR+ + DIED+
Sbjct: 289 P---------GVAAEKR---------CPYLPSKEDEGQVLQ--FRDH-TLATIKDIEDMG 327
Query: 339 HLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNLADS 398
LG+ M CPYY SRS++ +++V LPY LL +SAR++L L++KN++VIIDEAHNL D+
Sbjct: 328 KLGKRMGICPYYASRSVLKHSEIVTLPYPLLLQRSARDALDLSIKNHVVIIDEAHNLMDA 387
Query: 399 LINMYNAKITLSQLENVHSHLEKYFGRFCSLLGPGNRRYIQTLMVFTRAFLQVLLKEKDE 458
+ N+++ ITLSQL+ S L Y + + L NR YI ++ + L E
Sbjct: 388 ICNIHSVTITLSQLQTALSQLTTYARKHKARLKGKNRSYIAQIIRLISSIADHLRSTIGE 447
Query: 459 NDVRQDSENSTGAKHAFDSSVAINEFLFSLNIDNINLVKLLKYIKESNIIHKVSGYGDKA 518
N A+ A D S + + +D IN KL +Y++ES + KV GY + +
Sbjct: 448 N---------LPAEGAVDPS----DLMAGKGVDQINPYKLSRYLQESKLARKVDGYVEFS 494
Query: 519 ASLQKGSVLKDGGENYEEGSILSGFQSLVDMLISLTNNDGDGRIIISKARPISSGQQGQQ 578
+ S ++ +L QS L+ L N +GR K
Sbjct: 495 KDKNQQS------DDKPSSPVLFLVQSF---LLPLMNPSAEGRFFYLKF---------HD 536
Query: 579 GGYLKYVMLTGEKVFSEIVEQAHAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIV 638
LKY++L F EIVE A AVILAGGT+ P+ + R LF +++P++ FS H++
Sbjct: 537 DIQLKYMLLDPTNHFREIVEDARAVILAGGTMSPMSDYRNHLFSYIAPSRLDTFSYGHVI 596
Query: 639 PPESILPVALSCGPTGKSFDFSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYV 698
PPE+++ L G G FDF+Y SR S MI +LG + L +P+G++ FFPS++Y+
Sbjct: 597 PPENLIAHTLVNGVLGSEFDFTYDSRDSEKMILDLGRTVAMLCQAIPDGVVAFFPSYDYL 656
Query: 699 ERVYGAW-------KSLGILDRIMKKKHVFREPRG-NTHVESVLKEYQKTIDTLSSRPKE 750
R+ W K IL I +KK + E R E +L+EY +TID+
Sbjct: 657 SRILAIWRKPLVGEKGQTILSLIERKKSILYEGRDMGAKTEDLLQEYTRTIDS------- 709
Query: 751 DSTPLNGAMLLAVVGGKISEGINFSDGMGRCIVMVGLPYPSPSNIELLERIKHIEGLGDT 810
GA+LL+VVGGK+SEGINFSD +GR ++++GLP+P+ + +I+++E
Sbjct: 710 ----GQGALLLSVVGGKLSEGINFSDKLGRGVLIIGLPFPNIRSAVWQAKIQYVE----- 760
Query: 811 NSKTLNTSASDAYYNGDAQAGFGILRSCRGRGKEYYENLCMKAVNQSIGRAIRHINDHAA 870
KT N+S+ G + I ++ GK++YEN CM+AVNQ IGRAIRH ND+AA
Sbjct: 761 -QKTYNSSS------GSEKDRLSIAKAA---GKDFYENACMRAVNQCIGRAIRHRNDYAA 810
Query: 871 ILLVDLRYASESSKRSCSHPANKLPRWIKDRLV 903
I+++D RY + + KLP WIK ++
Sbjct: 811 IVMIDRRYEKANIQ-------GKLPAWIKQSML 836
>sp|Q96FC9|DDX11_HUMAN Probable ATP-dependent RNA helicase DDX11 OS=Homo sapiens GN=DDX11
PE=1 SV=1
Length = 970
Score = 474 bits (1220), Expect = e-132, Method: Compositional matrix adjust.
Identities = 292/867 (33%), Positives = 466/867 (53%), Gaps = 118/867 (13%)
Query: 3 EKEREAEAEFPAFPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWV 62
E ++ FP FP+ PYSIQ DFM LY LE G + + ESPTGTGK+LS+IC AL W+
Sbjct: 4 ETQKVGAIHFP-FPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWL 62
Query: 63 VD--QKQKQKQKQKYETMIKSDHSFTNNGDCSSND------------EPDWMRNFVVNRD 108
D QK+++++ + ET H + C S+ EP W+ FV ++
Sbjct: 63 RDFEQKKREEEARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKE 122
Query: 109 -------FQAEDAKIKKK-------KNGCGLGKTGERKHREISTDTFSHSMEKDKCFTKK 154
+AE A+ K++ ++ L +R +E + ++ T
Sbjct: 123 ERDLVDRLKAEQARRKQREERLQQLQHRVQLKYAAKRLRQEEEERENLLRLSREMLETGP 182
Query: 155 ECENLQSINDQSELSDEEFLLEEYESEEEGAIGGGKSKRKAGAGTISSSSDEEEEDGLDE 214
E E L +Q E +EE +L EYES+EE K A + D+ EE+
Sbjct: 183 EAERL----EQLESGEEELVLAEYESDEE----------KKVASRVDEDEDDLEEE---- 224
Query: 215 EGEEVLKVYFCSRTHSQLSQFIKELRKTVFANEIKVVCLGSRKNFCINEEVLRLGNSTHI 274
+ K+Y+CSRTHSQL+QF+ E++K+ F ++++V LGSR+N C+NE+V LG+ I
Sbjct: 225 ---HITKIYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLI 281
Query: 275 NERCLELQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDI 334
N+RC+++Q + + K + K RR + + CP +H+ R+E + D+
Sbjct: 282 NDRCVDMQRSRHEK--KKGAEEEKPKRRRQEKQAACP-FYNHEQMGLLRDEALAE-VKDM 337
Query: 335 EDLVHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHN 394
E L+ LG+ R CPYYGSR +P A LVVLPYQ LL + R++ G+ L++ +VIIDEAHN
Sbjct: 338 EQLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHN 397
Query: 395 LADSLINMYNAKITLSQLENVHSHLEKYFGRFCSLLGPGNRRYIQTLMVFTRAFLQVLLK 454
L D++ M++ +++ SQL HS L +Y R+ L N Y++ ++ F+ VL
Sbjct: 398 LIDTITGMHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGG 457
Query: 455 EKDENDVRQD-SENSTGAKHAFDSSVAINEFLFSLNIDNINLVKLLKYIKESNIIHKVSG 513
+N Q S+ T K IN+FLF IDNINL K+ +Y ++S I K+ G
Sbjct: 458 NIKQNPNTQSLSQTGTELK-------TINDFLFQSQIDNINLFKVQRYCEKSMISRKLFG 510
Query: 514 YGDKAASLQKGSVLKDGGENYEEGSILSGFQSLVD------------------------- 548
+ ++ G+V E L+GFQ +
Sbjct: 511 FTER-----YGAVFSS-----REQPKLAGFQQFLQSLQPRTTEALAAPADESQASTLRPA 560
Query: 549 --------MLISLTNNDGDGRIIISKARPISSGQQGQQGGYLKYVMLTGEKVFSEIVEQA 600
L +LT + DGR+I+S+ +S LK+++L F+++V++
Sbjct: 561 SPLMHIQGFLAALTTANQDGRVILSRQGSLSQ-------STLKFLLLNPAVHFAQVVKEC 613
Query: 601 HAVILAGGTLQPIEETRERLFPW--LSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFD 658
AV++AGGT+QP+ + R++L + + FSC H++PP++ILP+ + G + + +
Sbjct: 614 RAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLE 673
Query: 659 FSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKK 718
F++ R M++E+G +LCNL VVP G++ FFPS+EY+ +V+ W+ G+L R+ +K
Sbjct: 674 FTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARK 733
Query: 719 HVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGM 778
+F+EP+ VE VL Y + I ++ + GA+LL+VVGGK+SEGINFSD +
Sbjct: 734 KIFQEPKSAHQVEQVLLAYSRCIQACG----QERGQVTGALLLSVVGGKMSEGINFSDNL 789
Query: 779 GRCIVMVGLPYPSPSNIELLERIKHIE 805
GRC+VMVG+P+P+ + EL E++ +++
Sbjct: 790 GRCVVMVGMPFPNIRSAELQEKMAYLD 816
>sp|A2QY22|CHL1_ASPNC ATP-dependent RNA helicase chl1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=chl1 PE=3 SV=1
Length = 874
Score = 462 bits (1190), Expect = e-129, Method: Compositional matrix adjust.
Identities = 329/979 (33%), Positives = 482/979 (49%), Gaps = 194/979 (19%)
Query: 16 PYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQKY 75
PY PY IQ M+ALY LE G V++ ESPTGTGK+LS+IC +L W+ D K + +
Sbjct: 11 PYSPYDIQLQLMRALYSCLEQGKVAVFESPTGTGKSLSLICGSLTWLRDHK-----RSAF 65
Query: 76 ETMIKSDHSFTNNGDCSSNDEPDWMRNFVVNRDFQAEDAKIKKKKNGCGLGKTGERKHRE 135
+T + +N C +DEP+WM +F + K K+ + + E + R
Sbjct: 66 QTAV-------DNATCD-DDEPEWMLDFARRESSRMMTEKRKELEERLEKTRKEEEQQR- 116
Query: 136 ISTDTFSHSMEKDKCFTKKECENLQSINDQSELSDEEFLLEEYESEEEGAIGGGKSKRKA 195
++E + KK+ ++ + + LS+++F L++Y+SE E A
Sbjct: 117 -------IALENPEGPRKKQKYSI-PLTESGGLSEDQFALDDYDSENEEH--SKPRDELA 166
Query: 196 GAGTISSSSDEEEE----------DGLDEEGEEVLKVYFCSRTHSQLSQFIKELRKTVFA 245
+S S+ E E G D+ + +K+++CSRTHSQL+QF ELR+
Sbjct: 167 HTSELSPSTLELLERFKGQISTAKPGSDDADNDEVKIFYCSRTHSQLTQFAGELRRVKMP 226
Query: 246 -------------------NEIKVVCLGSRKNFCINEEVLRLGNSTHINERCLELQNKKK 286
+K V LGSRKN CIN V L N+T INERCL+LQ
Sbjct: 227 WSIPKDLLSTDLTGEEELEERVKHVTLGSRKNLCINPRVSSLENATAINERCLDLQQPNV 286
Query: 287 NEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDLVHLGRHMRT 346
N + L ++ R+ F R H L DIEDL LG+ +
Sbjct: 287 NPQHRCPFLPSKEDERQVLQF------RDHALST----------VKDIEDLGKLGKKIGI 330
Query: 347 CPYYGSRSMVPTAD------------------LVVLPYQSLLSKSARESLGLNLKNNIVI 388
CPYY SRS+V ++ +V LPY LL +SARE+L ++K +++I
Sbjct: 331 CPYYASRSVVKDSEVCCLRARSSIDLVPDEWQIVTLPYPLLLQRSAREALNSSVKGHVII 390
Query: 389 IDEAHNLADSLINMYNAKITLSQLENVHSHLEKYFGRFCSLLGPGNRRYIQT---LMVFT 445
IDEAHNL D++ N+++ +TLSQL+ S L Y +F + L NR Y+ L+
Sbjct: 391 IDEAHNLMDAISNIHSVTVTLSQLQTSLSQLTIYGRKFKTRLKGKNRSYVAQVIRLLSSI 450
Query: 446 RAFLQVLLKEKDENDVRQDSENSTGAKHAFDSSVAINEFLFSLNIDNINLVKLLKYIKES 505
A L+ LL+ + A + V I+E + +D IN KL +Y++ES
Sbjct: 451 AAHLRSLLE----------------SGKAPEGPVLISELMSGKGVDQINPYKLSRYLQES 494
Query: 506 NIIHKVSGY-------GDKAASLQKGSVLKDGGENYEEGSILSGFQSLVDMLISLTNNDG 558
+ KV GY DK AS + +V +L Q L+SL N
Sbjct: 495 KLARKVDGYVEFTRDPSDKQAS-RSPTV-----------PVLFHIQGF---LLSLMNPSA 539
Query: 559 DGRIIISKARPISSGQQGQQGGY-LKYVMLTGEKVFSEIVEQAHAVILAGGTLQPIEETR 617
+GR+ SK +QG LKY++L F E+VE A A+ILAGGT+ P+ +
Sbjct: 540 EGRLFYSK----------EQGDIQLKYMLLDPTNQFRELVEDARAIILAGGTMSPMTDYM 589
Query: 618 ERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFDFSYGSRSSSAMIEELGLLL 677
LF ++ ++ FS H++PPE+++ L G G FDF+Y +R S MI +LG +
Sbjct: 590 NHLFSYVPASRLDTFSYGHVIPPENLIAHTLVRGVQGSEFDFTYDARDSEKMIMDLGRTI 649
Query: 678 CNLVSVVPEGIIVFFPSFEYVERVYGAWKS--LG-----ILDRIMKKKHVFREPRGNT-H 729
L V+P+G++ FFPS++Y+ RV WK LG + + I +KK + E R T
Sbjct: 650 ATLCHVIPDGVVAFFPSYDYLGRVLNIWKKPMLGEQGQTVYNLIGQKKPILSESRDMTVT 709
Query: 730 VESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGMGRCIVMVGLPY 789
E +L Y T+D S R GA+LL+VVGGK+SEGINFSD +GR +++VGLP+
Sbjct: 710 TEELLHTYANTVD--SGR---------GALLLSVVGGKLSEGINFSDKLGRGVLIVGLPF 758
Query: 790 PS------PSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSCRGRGK 843
P+ + I+ +E+ H + G S+ L A+ G+
Sbjct: 759 PNIRSAVWQAKIQYIEQKTHQQATGSEASRQLAAKAA---------------------GR 797
Query: 844 EYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWIKDRLV 903
++YEN CM+AVNQ IGRAIRH ND+AAI+LVD RY + KLP WIK +V
Sbjct: 798 DFYENSCMRAVNQCIGRAIRHRNDYAAIVLVDRRYEKPGIQ-------AKLPAWIKQSMV 850
Query: 904 SST--NNYGEVHRLLHQFF 920
S+ G + L +FF
Sbjct: 851 GSSVQRPAGATVQSLAKFF 869
>sp|O14147|CHL1_SCHPO ATP-dependent RNA helicase chl1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=chl1 PE=3 SV=1
Length = 844
Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust.
Identities = 302/939 (32%), Positives = 484/939 (51%), Gaps = 143/939 (15%)
Query: 16 PYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQKY 75
PY PY IQ +FM++LY S+ +G + + ESPTGTGK+LS+IC++L W+ +
Sbjct: 16 PYTPYDIQLEFMRSLYSSISDGKIGIFESPTGTGKSLSLICASLTWLDEHGG-------- 67
Query: 76 ETMIKSDHSFTNNGDCSSNDEPDWM--RNFVVNRDFQAED-AKIKKKKNGCGLGKTGERK 132
+++ + +N +S+ PDW+ ++ + +D E A+++++ + K + +
Sbjct: 68 -VLLEDNEKSNDNKSNTSSKIPDWVLEQDLKIQKDLVKETHARLEQRLEE--IRKRNQSR 124
Query: 133 HREISTDTFSHSMEKDKCFTKKEC---ENLQSINDQSELSDEEFLLEEY------ESEEE 183
++S ++ ++ E + E +N + N + DE + EY E E+
Sbjct: 125 KNQMSNNSTTYHRETKRRNINAEASTSDNCNNSNTSVDPMDEYLVTAEYTMPSTSEQSED 184
Query: 184 GAIGGGKSKRKAGAGTISSSSDEEEEDGLDEEGEEVLKVYFCSRTHSQLSQFIKELRK-- 241
G SK +S +E+ V K+YF SRTHSQL Q ++E++K
Sbjct: 185 LFNNGYSSKVSELLRKLSPD---------NEKPPIVQKIYFTSRTHSQLQQLVQEIKKLN 235
Query: 242 -TVFANEIKVVCLGSRKNFCINEEVLRLGNSTHINERCLELQNKKKNEICKIKNLGAEGK 300
F+ I+VV L SRKN CIN EV +L ++ +NE+C+ELQ G+ K
Sbjct: 236 NQTFSTPIRVVSLASRKNLCINNEVRKLRPTSALNEKCIELQ-------------GSAHK 282
Query: 301 VRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDLVHLGRHMRTCPYYGSRSMVPTAD 360
CP L+ + FR+E + +DIE+LV LG+ ++ CPYYG+R V +A
Sbjct: 283 ---------CPFLQDNTQLWDFRDEALAE-IMDIEELVELGQRLKVCPYYGTREAVDSAQ 332
Query: 361 LVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNLADSLINMYNAKITLSQLENVHSHLE 420
+V LPY LL +SAR +L L LK+NI IIDEAHNL D++ +M+++ I+ Q+ + L+
Sbjct: 333 IVTLPYPLLLQESARNALNLTLKDNICIIDEAHNLIDAICSMHSSSISFRQVCIAETQLQ 392
Query: 421 KYFGRFCSLLGPGNRRYIQTLMV----FTRAFLQVLLKEKDENDVRQDSENSTGAKHAFD 476
+YF RF L NR +I+ L+ FL L E +T +K
Sbjct: 393 QYFLRFEKRLNGNNRMHIKQLIKVVYNLKSFFLNCL-------------ETNTNSK---- 435
Query: 477 SSVAINEFLFSLNIDNINLVKLLKYIKESNIIHKVSGYGDKAASL--QKGSVLKD----- 529
+ ++ L S D INL L +Y+ S + KV GY SL Q+ L D
Sbjct: 436 -VINVDSLLVSNGADQINLHHLSEYLNVSKLARKVDGYTKYMHSLGTQELESLNDLRSER 494
Query: 530 --GGENYEEGSILSGFQSLVDMLISLTNNDGDGRIIISKARPISSGQQGQQGGYLKYVML 587
G YEE L L+++ N +G++ K Q YLKY++L
Sbjct: 495 FSNGNGYEEDPYTPVLMQLESFLLNIANPAPEGKLFYEK--------QTGDNPYLKYLLL 546
Query: 588 TGEKVFSEIVEQAHAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVA 647
K + EQ +V LAGGT+ PI++ LF ++ FSC HIVPPE+I +
Sbjct: 547 DPSKHVEILTEQCRSVNLAGGTMSPIDDFITLLFS-DEQSRILPFSCDHIVPPENITTIL 605
Query: 648 LSCGPTGKSFDFSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKS 707
+S GP G F+F++ + ++++LG N +S++P+G++VFFPSF ++++ W+
Sbjct: 606 VSQGPAGVPFEFTHKRKDDENLLKDLGRTFQNFISIIPDGVVVFFPSFAFLQQAVKVWEM 665
Query: 708 LGILDRIMKKKHVFREPR--GNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVG 765
GI +R+ KK +F E + G+ +++ + Y++++D S ML +V+G
Sbjct: 666 NGITNRLNAKKPLFIESKDFGDNPLDT-FEHYKQSVDAGLS-----------GMLFSVIG 713
Query: 766 GKISEGINFSDGMGRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYN 825
G++SEGINFSD +GR +++VG+P+P+ ++E ++ ++E +K +A A
Sbjct: 714 GRLSEGINFSDKLGRAVMVVGMPFPNSQDVEWQAKVSYVE----EKAKEKGINAKQA--- 766
Query: 826 GDAQAGFGILRSCRGRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKR 885
+E+YEN CM+AVNQSIGRAIRH +D+A+I+L+D RY S +R
Sbjct: 767 ----------------SQEFYENTCMRAVNQSIGRAIRHRDDYASIILLDSRYNRSSIQR 810
Query: 886 SCSHPANKLPRWIKDRLVSSTNNYGEVHRLLHQFFKFNK 924
KLP W+ + SS N+G R L FF+ K
Sbjct: 811 -------KLPNWLSKNIHSSP-NFGPAIRQLATFFRAKK 841
>sp|A3LN13|CHL1_PICST ATP-dependent RNA helicase CHL1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=CHL1 PE=3 SV=2
Length = 835
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 301/926 (32%), Positives = 474/926 (51%), Gaps = 135/926 (14%)
Query: 16 PYKPYSIQTDFMKALYCSLENG-GVSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQK 74
PYKPY IQ M A+Y +++NG + + ESPTGTGKTLSIICS + W+ D K++
Sbjct: 15 PYKPYDIQIQLMDAIYDTIDNGYKIGLFESPTGTGKTLSIICSTMTWLRDYKRENV---- 70
Query: 75 YETMIKSDHSFTNNGDCSSNDEPDWMRNFVVNRDFQAEDAKIKKKKNGCGLGKTGERKHR 134
++ M + ++ D S+DEP+W++ RD ++ K L K
Sbjct: 71 FQPM--AGLDGSDTDDSDSDDEPEWVKK--AYRDTIVSRSENKMVDYEMYLEKIQNEYEN 126
Query: 135 EISTDTFSHSMEKDKCFTKKECENLQSINDQSELSDEEFLLEEYESEEEGAIGGGKSKRK 194
I T + S++ + KK +S + EL DE+FL E+Y S+ E K
Sbjct: 127 NIQT---AGSIKSSRPPKKK-----RSTAKKQELHDEDFLPEDYYSDSE-------VKPN 171
Query: 195 AGAGTISSSSDEEEEDGLDEEGEEV-------LKVYFCSRTHSQLSQFIKELRKTVFANE 247
A T+ S + D ++ +E+ + +YF SRTHSQL+QF +L T F +
Sbjct: 172 ADKLTVLESEISQLLDKVNGRTDEIEMTNDCPVNIYFSSRTHSQLNQFAHQLALTKFQSS 231
Query: 248 IKVV-------CLGSRKNFCINEEVLRLG-NSTHINERCLELQNKKKNEICKIKNLGAEG 299
K V +GSRK CINE+V N ++IN+ C++LQ K+
Sbjct: 232 FKGVEERTKYLPIGSRKQLCINEKVKSFSKNDSNINDVCVDLQKSKE------------- 278
Query: 300 KVRRTKAFSGCPVLRSHKLQKGFR---NEISQQGALDIEDLVHLGRHMRTCPYYGSRSMV 356
GC L L +++S DIE++ LG +M+ CPYY R V
Sbjct: 279 ---------GCQFLPKDYLNSSLTKKLSDLSLSKIHDIEEIADLGSNMKVCPYYSVRKGV 329
Query: 357 PTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNLADSLINMYNAKITLSQLENVH 416
+++ LPYQ LLS+S R L L ++++IV+IDEAHNL D++ +M++ IT+ ++ ++
Sbjct: 330 EMTEIISLPYQILLSESTRAILNLQIEDSIVVIDEAHNLMDTITSMHSVCITIGEMNSII 389
Query: 417 SHLEKYFGRFCSLLGPGNRRYIQTLMVFTRAFLQVLLKEKDENDVRQDSENSTGAKHAFD 476
L+ Y GRF L GNR ++ L+ + + + K + N+++ +E +T +
Sbjct: 390 KALKFYLGRFLKKLNSGNRIHLMKLIKLCQLVISFIQKSEKCNNIKVGNEINTS--DIYQ 447
Query: 477 SSVAINEFLFSLNIDNINLVKLLKYIKESNIIHKVSGYGDKAASLQKGSVLKDGGENYEE 536
+S D +N+ L ++ +S I +K+ Y +K A ++ E +
Sbjct: 448 NSTG----------DMLNIHILEAFLAKSKIAYKIESYMEKVA--------ENENEQAKT 489
Query: 537 GSILSGFQSLVDMLISLTNNDGDGRIIISKARPISSGQQGQQGGYLKYVMLTGEKVFSEI 596
S +V L L N +G+ I+S +KY++L VF +I
Sbjct: 490 SSSNPLLYKIVQFLKCLVNPSKEGKFFWDSTNGITS---------IKYMLLDPSSVFKDI 540
Query: 597 VEQAHAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPES--ILPVALSCGPTG 654
V +A VIL GGT++P+ E + LFP++ K FSC+HI+PP++ + PV+
Sbjct: 541 VSKARCVILCGGTMEPMSEFKNFLFPYVEDKKIKSFSCNHIIPPDNLKVYPVS---SQNN 597
Query: 655 KSFDFSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRI 714
+ +FS+ +R++ MIE LG + + VP+G++VFFPS++Y+ + WKS +L +I
Sbjct: 598 VTLEFSFDNRNNPLMIEALGASIVRICQSVPDGVVVFFPSYKYMNHILSIWKSTDVLTQI 657
Query: 715 MKKKHVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINF 774
+K +F EP + V+++L +Y TI KE+ GA+L +VVGGK+SEGINF
Sbjct: 658 ESQKKLFEEPTSASQVQTILADYANTI-------KEEK---KGAILFSVVGGKMSEGINF 707
Query: 775 SDGMGRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGI 834
+D +GR +VMVGLPYP+ + E++ + K IE S+A G +
Sbjct: 708 ADELGRAVVMVGLPYPNAYSGEIIAKRKFIE--------------SEAIARGCS------ 747
Query: 835 LRSCRGRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKL 894
+ + + YYENLCM+AVNQSIGR+IRHIND++ I LVD RY S S NKL
Sbjct: 748 MSEAQRNSQSYYENLCMRAVNQSIGRSIRHINDYSIIYLVDCRYQS-------SRIQNKL 800
Query: 895 PRWIKDRLVSSTNNYGEVHRLLHQFF 920
W++ R+ + N ++ FF
Sbjct: 801 SSWVRKRIETRNYNMDQIMEETRDFF 826
>sp|Q1E5T3|CHL1_COCIM ATP-dependent RNA helicase CHL1 OS=Coccidioides immitis (strain RS)
GN=CHL1 PE=3 SV=1
Length = 861
Score = 438 bits (1126), Expect = e-121, Method: Compositional matrix adjust.
Identities = 303/954 (31%), Positives = 477/954 (50%), Gaps = 162/954 (16%)
Query: 16 PYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQKY 75
PY PY IQ FM++LY +E V + ESPTGTGK+LS+IC +L W+ D K+
Sbjct: 11 PYSPYDIQVQFMRSLYTCIEECKVGIFESPTGTGKSLSLICGSLTWLRDHKR-------- 62
Query: 76 ETMIKSDHSFTNNGDCSSNDEPDWMRNFVVNRDFQAEDAKIKKKKNGCGLGKTGE--RKH 133
++ D N D +DEP+W+ + + + K+ ++ + E R+
Sbjct: 63 -SVFLED---IENSD--GDDEPEWILQYSRKEKRRIIRERRKRVEDRLSRIRKEELLREK 116
Query: 134 REISTDTFSHSMEKDKCFTKKECENLQSINDQSELSDEEFLLEEYESE-EEGAIGGGKSK 192
I+ F +D K+ + + D F L+EY+S+ +E + KS
Sbjct: 117 AAIANIPFKKQRLEDG---KRHLDKMAD--------DGAFELDEYDSDNQETSTHDAKSN 165
Query: 193 RKAGAGTISS----SSDEEEEDGLDEEGEEVLKVYFCSRTHSQLSQFIKELRKTVFANEI 248
A TI+ S E +D +EE +K+++CSRTHSQL+QF +ELR+ VF I
Sbjct: 166 SDLSATTIALLEKLSGSAEIQDDFEEEN--AVKIFYCSRTHSQLAQFARELRRVVFPPSI 223
Query: 249 ---------------------------KVVCLGSRKNFCINEEVLRLGNSTHINERCLEL 281
K V LGSRK CIN +V RLGN+T INERCL+L
Sbjct: 224 PPETEDGEIDTQGEGRRHPDTELEEPTKHVSLGSRKTMCINPKVRRLGNATAINERCLDL 283
Query: 282 QNKKKNEICKIKNLGAEGKVRRTKAFSG--CPVLRSHKLQ---KGFRNEISQQGALDIED 336
Q+ + G CP S + + FR+ + + DIED
Sbjct: 284 QS--------------------SNVLPGHKCPFAPSKENELAINDFRDHVLAE-VHDIED 322
Query: 337 LVHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNLA 396
+ +G+ CPYY SRS++ +++V LPYQ LL KSAR++L ++LK++++IIDEAHNL
Sbjct: 323 IGKIGQRTGICPYYASRSVIGHSEIVTLPYQLLLQKSARDALDISLKDHVIIIDEAHNLM 382
Query: 397 DSLINMYNAKITLSQLENVHSHLEKYFGRFCSLLGPGNRRYIQTLMVFTRAFLQVLLKEK 456
D + N+++ ++L+QL L Y ++ + L NR Y+ +M + + L
Sbjct: 383 DVIANIHSVNVSLTQLRIGLEQLTIYARKYKARLKGKNRVYVAQVMRLLGSIAKYL---- 438
Query: 457 DENDVRQDSENSTGAKHAFDSSVAINEFLFSLNIDNINLVKLLKYIKESNIIHKVSGYGD 516
E+ A+ + +V + + ID INL KL +Y++ES + KV GY +
Sbjct: 439 ---------ESVLAARELREGAVDPSYLMSGKGIDQINLHKLSRYLQESKLARKVDGYIE 489
Query: 517 KAASLQKGSVLKDGGENYEEGSILSGFQSLVDMLISLTNNDGDGRIIISKARPISSGQQG 576
+ SL++ +N E + + + L+SL N +GR+ K
Sbjct: 490 SSTSLEE--------KNPETSTTVPVLFQVQSFLLSLMNPSAEGRLFFEK---------N 532
Query: 577 QQGGYLKYVMLTGEKVFSEIVEQAHAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSH 636
LKY +L F E VE+A AVILAGGT+ P+ + R+ LF +L+P + FS H
Sbjct: 533 GNDVLLKYTLLDPTAHFREAVEEARAVILAGGTMSPMSDYRDHLFSYLAPGQLRTFSYGH 592
Query: 637 IVPPESILPVALSCGPTGKSFDFSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFE 696
++P ++ +S G FDF++ R+S AMI +LG + + P+G++ FFPS++
Sbjct: 593 VIPTSNLSARPVSRGILDTEFDFTFEKRNSRAMIIDLGKTISEICKATPDGVVAFFPSYD 652
Query: 697 YVERVYGAWK-------SLGILDRI-MKKKHVFREPRGNTHVESVLKEYQKTIDTLSSRP 748
++ +V WK + ILD + + K ++ + E++L++Y ID
Sbjct: 653 FLNQVVEIWKQPCSNSGNPSILDSLGLVKPLLYESKEKAMNTEALLQKYANFIDE----- 707
Query: 749 KEDSTPLNGAMLLAVVGGKISEGINFSDGMGRCIVMVGLPYPSPSNIELLERIKHIEGLG 808
GA+LL+V+GGK+SEGINFSD +GR ++++GLP+ + + E +I+++E
Sbjct: 708 ------GKGALLLSVMGGKLSEGINFSDRLGRGVIVIGLPFANIRSAEWQAKIQYVE--- 758
Query: 809 DTNSKTLNTSASDAYYNGDAQAGFGILRS-CRGRGKEYYENLCMKAVNQSIGRAIRHIND 867
KT S+ G RS + G+++YEN CM+ VNQ IGRAIRH +D
Sbjct: 759 ---RKTYERSS----------GGEETRRSKAKLAGRDFYENACMRVVNQCIGRAIRHQHD 805
Query: 868 HAAILLVDLRYASESSKRSCSHPANKLPRWIKDRLVSSTNNYGEVHRLLHQFFK 921
+AAIL+ D RY + + +KLP WI+ L+S+ G L+ FF+
Sbjct: 806 YAAILMFDRRYGT-------ARIQSKLPEWIRRSLISAP--IGATISNLYTFFE 850
>sp|A7UXD4|CHL1_NEUCR ATP-dependent RNA helicase chl-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=chl-1 PE=3 SV=1
Length = 1073
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 310/951 (32%), Positives = 464/951 (48%), Gaps = 155/951 (16%)
Query: 39 VSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQKYETMIKSDHSFTNNGDCSSNDEPD 98
+++ ESPTGTGK+LS+IC +L W+ + K+ Q +++ I+ ++ EP+
Sbjct: 150 IALFESPTGTGKSLSLICGSLTWLRNHKRLQ-----FDSEIEKIQQ-----QMEASGEPE 199
Query: 99 WMRNFVVNRDFQAEDAKIKKKKNGCGLGKTGERKHREISTDTFSHSMEKDKCFTKKECEN 158
WM + R + K ++ + +T ER ++ + + +++ +
Sbjct: 200 WMVESAIKRKREELAQKYEE------MERTLERIRQKEREMEKEGEEGQARGGKRRKLDR 253
Query: 159 LQSINDQSELS--------------DEEFLLEEYESE---EEGAIGGGKSKR------KA 195
+ ++ D+EFL+ ++ E +E G SK K
Sbjct: 254 GKGDEEKGGKKKESGGSRGLTASDEDKEFLIGDWRDEGGLDENDPMGQLSKETRELLEKV 313
Query: 196 GAGTISSSSDEEEEDGLDEEGEEVLKVYFCSRTHSQLSQFIKELRKTVF----------- 244
G GT + E +EE +K+++ SRTHSQL+QFI+ELR+ F
Sbjct: 314 GMGTAGGKKEANEGPVAEEE----IKIFYTSRTHSQLTQFIQELRRPEFPASVPTPNPQE 369
Query: 245 --ANEI-KVVCLGSRKNFCINEEVLRLGNSTHINERCLELQNKK--KNEICK----IKNL 295
A EI K + L SR+ CIN V +LG INERC LQ K K++ C NL
Sbjct: 370 KPAKEIVKQIPLSSRQKLCINPTVNKLGTLAAINERCQSLQQPKTPKDQRCPYLPNAANL 429
Query: 296 GAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDLVHLGRHMRTCPYYGSRSM 355
A + R T A + P DIEDL G+ ++ CPYY SR+
Sbjct: 430 KATHEFRDT-ALATLP---------------------DIEDLYQTGKQLQICPYYASRAA 467
Query: 356 VPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNLADSLINMYNAKITLSQLENV 415
+P A+++ LPY LL KSARE+LG+ L+ NIVIIDEAHN+ D++ N++ A+I + L+
Sbjct: 468 IPGAEVITLPYPLLLQKSAREALGIRLEGNIVIIDEAHNIMDAVSNVHAAEIKYTDLKRA 527
Query: 416 HSHLEKYFGRFCSLLGPGNRRYIQTLMVFTRAFLQVLLKEKDENDVRQDSENSTGAKHAF 475
L Y+ RF L N+ + L A L V LK K + + G
Sbjct: 528 KLSLGMYYQRFHQKLTGENKVMVAQLQRVVEA-LGVYLKTKLDKAALGLKADQEGI--VL 584
Query: 476 DSSVAINEFLFSLNIDNINLVKLLKYIKESNIIHKVSGYGDKAASLQKGSVLKDGGENYE 535
D+S+ L + D INL KL++Y++ES + K+ GY + + D E
Sbjct: 585 DTSL----LLKTGGADQINLYKLIRYVQESKLAFKIEGYISYCEEEGRDT---DDEEAET 637
Query: 536 EGSILSG----FQSLVDMLISLTNNDGDGRIIISKARPISSGQQGQQGGYLKYVMLTGEK 591
E G +L L +LTN +GRI K P Q + L Y++L+
Sbjct: 638 EIKARQGRPPVLHTLCSFLTALTNLSSEGRIFYEKIPPPRGELQDMK---LSYMLLSPTH 694
Query: 592 VFSEIVEQAHAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVAL-SC 650
FS I E A AVILAGGT+ P E+ + LFP + P K SC H++PP+++ L S
Sbjct: 695 AFSSIAESARAVILAGGTMSPFEDYKAHLFPDVPPEKITTLSCGHVIPPDNLCVWTLGSI 754
Query: 651 GPTGK--------SFDFSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVY 702
P K FDF++ RS+ MI LGL+L NL SVVP+G++ FFPS+ Y+E V
Sbjct: 755 APNPKVDTGIGEDCFDFTFAKRSNPNMINRLGLVLLNLCSVVPDGVVAFFPSYGYLEEVI 814
Query: 703 GAWKS----LG---ILDRIMKKKHVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPL 755
G WK+ +G I +R+ KK +F + + + E L++Y I + + +
Sbjct: 815 GVWKTHEQAMGPKTIWERLESKKALFIDSKTESS-EQTLQKYSDVIHSEVRPLSPAGSRV 873
Query: 756 NGAMLLAVVGGKISEGINFSDGMGRCIVMVGLPYPSPSNIELLERIKHIEG--------- 806
GAMLL+V+GGK+SEGINFSD +GRC+V+VG+PYP+P + E L R +++E
Sbjct: 874 KGAMLLSVIGGKMSEGINFSDRLGRCVVVVGMPYPNPHSPEWLARREYLEANFIKRYTAS 933
Query: 807 -----------------LGDTNSKTLNTSASDAYYNGDAQAGFGILRSCRGRGKEYYENL 849
+T + N S+S N D + + ++YEN
Sbjct: 934 QQTSTATAPLPAPVIPPPSNTTHYSTNPSSS---RNKDKHKPANVRKLAARDSHQFYENA 990
Query: 850 CMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWIKD 900
++AVNQSIGRAIRH ND+AAI+L+D R+ E H KLP WI++
Sbjct: 991 TLRAVNQSIGRAIRHQNDYAAIVLIDNRFEKE-------HVRAKLPGWIRE 1034
>sp|A1CJ34|CHL1_ASPCL ATP-dependent RNA helicase chl1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=chl1 PE=3 SV=1
Length = 731
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 275/796 (34%), Positives = 411/796 (51%), Gaps = 136/796 (17%)
Query: 156 CENLQSIN-DQSELSDEEFLLEEYESEEEGAIGGGKSKRKAGAGTIS------------S 202
C+ +++ D+ DE F+LE+Y+SE E KS + ++S S
Sbjct: 2 CQKYDTLSGDRDVEHDEHFVLEDYDSESEDQNISSKSLGHSSELSMSTLALLERFKKQYS 61
Query: 203 SSDEEEEDGLDEEGEEVLKVYFCSRTHSQLSQFIKELRKT------------------VF 244
+ EEEE D+E K+++CSRTHSQL+QF ELR+
Sbjct: 62 APTEEEETVGDDEP----KIFYCSRTHSQLAQFASELRRVEMPPSLPKELSEKLTDSEAL 117
Query: 245 ANEIKVVCLGSRKNFCINEEVLRLGNSTHINERCLELQNKKKNEICKIKNLGAEGKVRRT 304
+K + LGSRKN CIN V++L N+T INERC++LQ + E +
Sbjct: 118 EERVKHLSLGSRKNLCINPRVMKLENATAINERCMDLQQP---------GMAVEHR---- 164
Query: 305 KAFSGCPVLRSHKLQKG---FRNEISQQGALDIEDLVHLGRHMRTCPYYGSRSMVPTADL 361
CP L S + FR+ + DIED+ LG+H+ CPYY SRS++ +++
Sbjct: 165 -----CPYLPSKDDEPQVLQFRDH-TLATVKDIEDMGKLGKHIGVCPYYASRSVIKHSEI 218
Query: 362 VVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNLADSLINMYNAKITLSQLENVHSHLEK 421
V LPY LL +SARE+LGL++KN+IVIIDEAHNL D++ N+++ ITLSQL+ L
Sbjct: 219 VTLPYPLLLQRSAREALGLSIKNHIVIIDEAHNLMDAISNIHSVTITLSQLQTAIFQLTT 278
Query: 422 YFGRFCSLLGPGNRRYIQTLMVFTRAFLQVLLKEKDENDVRQDSENSTGAKHAFDSSVAI 481
Y +F + L NR YI ++ + L + G+ D +V
Sbjct: 279 YARKFKTRLKGKNRTYIAQVIRLVSSVADHL-------------RSIQGSNQPPDGAVKT 325
Query: 482 NEFLFSLNIDNINLVKLLKYIKESNIIHKVSGYGDKAASLQKGSVLKDGGENYEEG---- 537
++ + +D IN KL Y++ES + KV GY + + KD G
Sbjct: 326 SDLMAGKGVDQINPYKLSHYLQESKLARKVDGYVEYS---------KDTANRQSHGKPST 376
Query: 538 SILSGFQSLVDMLISLTNNDGDGRIIISKARPISSGQQGQQGGYLKYVMLTGEKVFSEIV 597
+L QS L+ L N +GR+ K Q LKY++L F EIV
Sbjct: 377 PVLFHVQSF---LLPLMNPSAEGRLFYMK---------DQNDIQLKYLLLDPTNHFREIV 424
Query: 598 EQAHAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSF 657
E A AVILAGGT+ P+ + LFP++ ++ FS H++PPE+++ L+ G G +F
Sbjct: 425 EDARAVILAGGTMSPMSDYMNHLFPYVPASRLDTFSYGHVIPPENLVAHTLAQGVMGCAF 484
Query: 658 DFSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAW-KSLG------I 710
DF+Y SR S MI +LG + L +P+G++ FFPS++Y+ R+ W K LG I
Sbjct: 485 DFTYESRDSEKMIIDLGRTVATLCQAIPDGVVAFFPSYDYLSRILHIWKKPLGADKNQTI 544
Query: 711 LDRIMKKKHVFREPRG-NTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKIS 769
L I +KK + E R T + +L+EY +TID+ S GA+LL+V+GGK+S
Sbjct: 545 LGLIERKKPILYESRDMTTKSDDILQEYTRTIDSGS-----------GALLLSVIGGKLS 593
Query: 770 EGINFSDGMGRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQ 829
EGINFSD +GR ++++GLP+P+ + +++++E Y+G +
Sbjct: 594 EGINFSDRLGRGVLIIGLPFPNIRSAVWQAKLQYVE---------------QKAYSGSSG 638
Query: 830 AGFGILRSCRGRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSH 889
+ + G+++YEN CM+AVNQ IGRAIRH ND+AAI+++D RY + +
Sbjct: 639 SETDRQMIAKAAGRDFYENACMRAVNQCIGRAIRHRNDYAAIVMIDRRYDKPNIQ----- 693
Query: 890 PANKLPRWIKDRLVSS 905
KLP WIK +V S
Sbjct: 694 --GKLPAWIKQSMVRS 707
>sp|Q6CAX3|CHL1_YARLI ATP-dependent RNA helicase CHL1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=CHL1 PE=3 SV=1
Length = 803
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 303/924 (32%), Positives = 469/924 (50%), Gaps = 157/924 (16%)
Query: 16 PYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQKY 75
PY PY IQ DFM+ALY +E+ V + ESPTGTGKTLS+IC ++ W+ +K K
Sbjct: 12 PYTPYPIQVDFMEALYDCIESYKVGIFESPTGTGKTLSLICGSMTWL--------RKNKA 63
Query: 76 ETMIKSDHSFTNNGDCSSNDEPDWMRNFVVNRDFQAEDAKIKKKKNGCGLGKTGERKHRE 135
+ + + + N EP W V+ + Q A+ + +N L K ++ R+
Sbjct: 64 QLAVSTASADEN--------EPAW----VLEQTIQL--AREEFSRNREMLQKRLDKMRRK 109
Query: 136 ISTDTFSHSMEKDKCFTKKECENLQSINDQSELSDEEFLLEEYESEEEGAIGGGKSKRKA 195
S+ E+ KK E + D +FL E+Y + +
Sbjct: 110 NMRARISY--EQGFKRAKKAPE---------PVDDSQFLPEDYSEVIKPEV--------- 149
Query: 196 GAGTISSSSDEEEEDGLDEEGEEVLKVYFCSRTHSQLSQFIKELRKTVFA--------NE 247
+S+ + E D +E +K+ F SRTHSQLSQF+ +++ T F
Sbjct: 150 -QRLLSALAPPVENDF-----QEPVKIIFASRTHSQLSQFVGQMQHTTFPPSSDLQDLES 203
Query: 248 IKVVCLGSRKNFCINEEVLRLGNSTHINERCLELQNKKKNEICKIKNL-GAEGKVRRTKA 306
K++ LGSRK CIN V + + +N+ C +L+ KK KN A GKV
Sbjct: 204 TKLISLGSRKQLCINPRVSHMNSVQAMNDACRDLREGKKGGCKYYKNPHDALGKVDINT- 262
Query: 307 FSGCPVLRSHKLQKGFRNEISQQGALDIEDLVHLGRHMRTCPYYGSRSMVPTADLVVLPY 366
FR+ + LDIEDL LG+H TCPYY SR+ +P ++++ +PY
Sbjct: 263 ---------------FRDTTLAE-ILDIEDLYKLGKHTSTCPYYASRASIPASEVITVPY 306
Query: 367 QSLLSKSARESLGLNLKNNIVIIDEAHNLADSLINMYNAKITLSQLENVHSHLEKYFGRF 426
Q LLS+SAR+++ L +KN+IVIIDEAHNL D++ +++ IT SQ+ + S L+KY +F
Sbjct: 307 QILLSRSARKAIDLPVKNSIVIIDEAHNLLDTITSLHTMSITKSQVSSASSGLQKYQHKF 366
Query: 427 CSLLGPGNRRYIQTLMVFTRAFLQVLLKEKDENDVRQDSENSTGAKHA--FDSSVAINEF 484
+ L GNR + L+ +A L+V EK + ++++ T + FD S A
Sbjct: 367 QNRLNSGNRVNLGYLVNMLQA-LEVFF-EKAQKFHKKETAPGTPVTTSSLFDGSTA---- 420
Query: 485 LFSLNIDNINLVKLLKYIKESNIIHKVSGYGDKAASLQKGSVLKDGGENYEE-GSILSGF 543
D IN+ +L KYI ES I+ K+ Y + GE E+ S
Sbjct: 421 ------DLINVNRLEKYIDESKIVFKIESYLEHV-----------NGETQEKSHSSSLVL 463
Query: 544 QSLVDMLISLTNNDGDGRIIISKARPISSGQQGQQGGYLKYVMLTGEKVFSEIVEQAHAV 603
S+++ L + N D +G + LKY +L + F +IVE A V
Sbjct: 464 SSVMEFLRQVNNPDSEGVLCFDGPTK------------LKYQLLDPSEPFKDIVENARCV 511
Query: 604 ILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFDFSYGS 663
+LAGGT++P + E L P+LS ++ FSC H++PP+++ + GP SF+F++
Sbjct: 512 VLAGGTMEPTGDYLEYLLPYLSQDQIKLFSCGHVIPPQNLSVQVIPNGP-NYSFNFTFDK 570
Query: 664 RSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSL-----GILDRIMKKK 718
R+ MI ++ + L ++PEG++VFFPS++Y+E+V WK I + + +K
Sbjct: 571 RNDEKMILDVAITLLVYSKIIPEGMVVFFPSYKYLEQVVAVWKKAKKDGKNIYEILNDQK 630
Query: 719 HVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGM 778
+F E + ++ VE L EY + + PK GA+LL+VVGGK+SEGINFSDG+
Sbjct: 631 RIFVESQHDS-VEKTLSEYAEEV------PK-------GAILLSVVGGKMSEGINFSDGL 676
Query: 779 GRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSC 838
R + M+GLP+P+ + E++ + K+IE K SA +A L +
Sbjct: 677 ARAVFMIGLPFPNLMSAEIIAKRKYIEQSVSEKMKAKGVSAKEA------------LEAS 724
Query: 839 RGRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWI 898
+G +++Y N+C++AVNQS+GRAIRH ND+A I L+D R+ ++ KL +W+
Sbjct: 725 KGAARDFYMNICLRAVNQSVGRAIRHANDYACIFLLDGRFGKPEIQK-------KLSKWM 777
Query: 899 KD--RLVSSTNNYGEVHRLLHQFF 920
++ R S GEV QFF
Sbjct: 778 REGIREGSFKEALGEV----QQFF 797
>sp|A5DNW6|CHL1_PICGU ATP-dependent RNA helicase CHL1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=CHL1 PE=3 SV=2
Length = 825
Score = 417 bits (1072), Expect = e-115, Method: Compositional matrix adjust.
Identities = 291/921 (31%), Positives = 465/921 (50%), Gaps = 132/921 (14%)
Query: 16 PYKPYSIQTDFMKALYCSLENG-GVSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQK 74
PYKPY IQ M A+Y +++N V + ESPTGTGKTLSIICS++ W+ + K+ Q
Sbjct: 13 PYKPYDIQVQLMDAIYDTIQNKYKVGLFESPTGTGKTLSIICSSMTWL----RNYKKTQD 68
Query: 75 YETMIKSDHSFTN--NGDCSSNDEPDWMRNFVVNRDFQAEDAKIKK-KKNGCGLGKTGER 131
+ TM S+ S N N S++EPDW++ +A IK + GL ER
Sbjct: 69 HSTM-GSNSSNDNDPNQTSDSDEEPDWVK-----------EAHIKNIRSRTSGLAIDYER 116
Query: 132 KHREIS-TDTFSHSMEKDKCFTKKECENLQSINDQSELSDEEFLLEEYESE-EEGAIGGG 189
E+S T H++E + K++ + +D++FL ++Y S+ + ++
Sbjct: 117 HLEELSQTPHAGHTVELGQRTHKRK---------KRATNDDDFLPDDYNSDTDSNSVETK 167
Query: 190 KSKRKAGAGTISSSSDEEEEDGLDEEGEEVLKVYFCSRTHSQLSQFIKELRKTVF----- 244
+K + I D + + ++F SRTHSQLSQF +L T F
Sbjct: 168 NAKLQQEINQIMKRVDGSDGKTPGFVNTCPVTIFFSSRTHSQLSQFAHQLSITSFESSLG 227
Query: 245 --ANEIKVVCLGSRKNFCINEEVLRLGNSTHINERCLELQNKKKNE---ICKIKNLGAEG 299
A IK + L SRK CI+ +V L + + +N+ C+ELQ K + ++ N ++
Sbjct: 228 EIAERIKFMPLSSRKQLCIHPKVSSLSSVSAVNDACVELQQKSDKRCEFMPRVNNPESDQ 287
Query: 300 KVRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDLVHLGRHMRTCPYYGSRSMVPTA 359
V+R +S + DIE+L LG ++ CPYY SR + +
Sbjct: 288 LVQRFADYSFAVIK-------------------DIEELHELGADLKVCPYYASRRNIENS 328
Query: 360 DLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNLADSLINMYNAKITLSQLENVHSHL 419
+++ LPYQ LL ++ R+SLGL++K++IVIIDEAHNL D + ++ + IT +L +V + L
Sbjct: 329 EIIALPYQMLLQQATRKSLGLSIKDSIVIIDEAHNLLDVISSINSVSITRKELSSVIASL 388
Query: 420 EKYFGRFCSLLGPGNRRYIQTLMVFTRAFLQVLLKEKDENDVRQDSENSTGAKHAFDSSV 479
+ Y+ +F L GNR ++ L+ + ++ +K + + K S V
Sbjct: 389 KLYYNKFTKRLNSGNRIHLMKLIKLC-SLVETYIKNCEIQN-----------KCVPGSDV 436
Query: 480 AINEFLFSLNIDNINLVKLLKYIKESNIIHKVSGYGDKAASLQKGSVLKDGGENYEEGSI 539
I+E D +N+ ++ KY+ +S I +K+ Y +++ ++ E +
Sbjct: 437 LIDELFQGSTGDLLNIHRIEKYLDKSKIAYKIQTYIEQSR--------EESDEKQASSPL 488
Query: 540 LSGFQSLVDMLISLTNNDGDGRIIISKARPISSGQQGQQGGYLKYVMLTGEKVFSEIVEQ 599
L + L SL N +GR K +KY++L ++F ++VE
Sbjct: 489 LFKVTAF---LKSLVNPSKEGRFFWDKI---------NDDTEIKYLLLDPSEMFRDVVES 536
Query: 600 AHAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFDF 659
A V+L GGT++P+E+ LFP++ K F+C HIVP E+I + +S T FDF
Sbjct: 537 ARCVLLCGGTMEPVEDYYRYLFPYVPGEKIKKFTCGHIVPQENIEVLTVSSRKT-TVFDF 595
Query: 660 SYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKKH 719
SY R+ +M+ EL L L ++ VP GIIVF PS++Y+ ++ W+ G L +I K
Sbjct: 596 SYHKRNDPSMLRELALSLQDICERVPNGIIVFAPSYKYLNQLISTWRKDGNLAKISTLKQ 655
Query: 720 VFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGMG 779
VF E +T +ES+L++Y +GA+L +VVGGK+SEG+NFSD +
Sbjct: 656 VFLESSDSTSIESILRDYGAAARG------------SGAILFSVVGGKMSEGVNFSDELA 703
Query: 780 RCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSCR 839
R ++M+GLPYP+ + EL+ + K IE TL+ + A +
Sbjct: 704 RAVIMLGLPYPNAFSGELIAKRKFIE------ETTLSKGGTQAM--------------AK 743
Query: 840 GRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWIK 899
+EYYEN+CM+AVNQS+GR+IRH ND++ I+L D RY S SH +KL W++
Sbjct: 744 KNSREYYENICMRAVNQSVGRSIRHANDYSVIVLFDTRYNS-------SHIQSKLSGWMR 796
Query: 900 DRLVSSTNNYGEVHRLLHQFF 920
+ ++ + FF
Sbjct: 797 SSIRPERESFDMTLERIADFF 817
>sp|Q5AD67|CHL1_CANAL ATP-dependent RNA helicase CHL1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=CHL1 PE=3 SV=1
Length = 842
Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust.
Identities = 295/920 (32%), Positives = 461/920 (50%), Gaps = 152/920 (16%)
Query: 16 PYKPYSIQTDFMKALYCSLENG-GVSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQK 74
PY PY IQ M A+Y ++ENG + + ESPTGTGKTLSIICS++ W+ K+
Sbjct: 13 PYTPYDIQIQLMDAIYNTIENGYKIGLFESPTGTGKTLSIICSSMTWLRTFKR------- 65
Query: 75 YETMIKSDHSFTNNGDCSSNDEPDWMRNFVVNRDFQAEDAKIKKKKNGCGLGKTGERKHR 134
NN +N+E + + + + E +KK + ++ K++
Sbjct: 66 ------------NNTFLETNNE---VEDVYESESEEDEPEWVKKAYQSSIVNRS---KNK 107
Query: 135 EISTDTFSHSMEKDKCFTKKECENLQ-SINDQ--------SELSDEEFLLEEYESEEEGA 185
I + + +EK+ K++ E L+ ++ + ++LS+E +L +Y S+ E
Sbjct: 108 LIEYEHYLDKIEKEHAQNKRKEEELEIKVHKRRKAMTAAGTDLSEESYLPMDYYSDSE-- 165
Query: 186 IGGGKSKRKAGAGTISSSSDE-EEEDGLDEEGEEVLKVYFCSRTHSQLSQFIKELRKTVF 244
+G + + A I+ + E ++ + E +K++F SRTHSQL+QF +LR T F
Sbjct: 166 VGKIEDQNLAITKEINRLLKKVENKEEVSYINECPIKIFFSSRTHSQLNQFSSQLRLTNF 225
Query: 245 A-------NEIKVVCLGSRKNFCINEEVLRLGNSTHINERCLELQNKKKNEICKIKNLGA 297
K + LGSRK CINE+V GN +N+ CL+LQ
Sbjct: 226 QASFEDLEERTKYIPLGSRKQLCINEKVRSKGNDQSVNDACLDLQ--------------- 270
Query: 298 EGKVRRTKAFSGCPVLRSHKLQKGFRNE---ISQQGALDIEDLVHLGRHMRTCPYYGSRS 354
R T +GC L + + E +S DIEDL LG + CPYY R
Sbjct: 271 ----RET---NGCQYLPKNYMMSSVTKEFADLSLAKIRDIEDLNELGIELNICPYYSVRK 323
Query: 355 MVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNLADSLINMYNAKITLSQLEN 414
+ +++ LPYQ + + R+ L L++K++I+IIDEAHN+ D + +MY+ KIT QL
Sbjct: 324 GIEMTEIISLPYQMIFQDTTRKILNLDIKDSIIIIDEAHNIIDVITSMYSIKITSDQLNK 383
Query: 415 VHSHLEKYFGRFCSLLGPGNRRYIQTLMVFTRAFLQVLLKEKDENDVRQDSENSTGAKHA 474
V L+ Y +F L GNR + L+ Q+LLK + N + S + +
Sbjct: 384 VIKSLKIYLNKFLKRLNSGNRINLMKLI----KICQILLKFLNTNSEKVKSGDEVQIQDI 439
Query: 475 FDSSVAINEFLFSLNIDNINLVKLLKYIKESNIIHKVSGYGDKAASLQKGSVLKDGGENY 534
F S D +N+ KL +++ +S I +K+ Y ++K + D GE
Sbjct: 440 FKDSTG----------DLVNIHKLDQFLTKSKIAYKIESY------IEKTEMETDNGE-- 481
Query: 535 EEGSILSGFQ-------------SLVDMLISLTNNDGDGRIIISKARPISSGQQGQQGGY 581
++G I + +++ L +LTN +G+ S
Sbjct: 482 KKGRITNSGGSSSSSSSSNPLLFTIIKFLRTLTNLSKEGKFFWDNENGTIS--------- 532
Query: 582 LKYVMLTGEKVFSEIVEQAHAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPE 641
L Y++L VF EIV+QA V+L GGT++P+ + + LFP + NK + F+C H++P E
Sbjct: 533 LNYMLLDPSAVFKEIVDQAKCVLLCGGTMEPMSDYMDYLFPSVPTNKINTFACGHVIPKE 592
Query: 642 SILPVALSCGPTGKSFDFSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERV 701
++ +S +F+FSY R+ S + LG L + VP G+++FFPS++Y+++V
Sbjct: 593 NLQVFPISQW-NDTNFEFSYQKRNDSKQLMALGEFLIEITKRVPYGVVIFFPSYKYLDQV 651
Query: 702 YGAWKSLGILDRIMKKKHVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLL 761
W+ IL I +K +FREP+ ++VE VL EY I T GA+L
Sbjct: 652 LQFWRDTKILTSIESEKTIFREPKDPSNVEKVLNEYGYLI----------QTERKGAILF 701
Query: 762 AVVGGKISEGINFSDGMGRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASD 821
+VVGGK+SEGINFSD + R ++MVGLPYP+ + E++ + K+IE +N T +D
Sbjct: 702 SVVGGKMSEGINFSDDLARAVIMVGLPYPNAYSGEMVTKRKYIETSELSNGGT----TTD 757
Query: 822 AYYNGDAQAGFGILRSCRGRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASE 881
A + + + YYENLCM+AVNQSIGR+IRHIND++ I LVD R+
Sbjct: 758 A----------------KEKSRNYYENLCMRAVNQSIGRSIRHINDYSIIYLVDRRF--- 798
Query: 882 SSKRSCSHPANKLPRWIKDR 901
S NKL +W+K+R
Sbjct: 799 ----STPRIQNKLSQWVKER 814
>sp|Q4WWE9|CHL1_ASPFU ATP-dependent RNA helicase chl1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=chl1
PE=3 SV=1
Length = 782
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 269/784 (34%), Positives = 411/784 (52%), Gaps = 138/784 (17%)
Query: 170 DEEFLLEEYESEEEGAIGGGKSKRKAGAGTISSSSDE-----------EEEDGLDEEGEE 218
D++F+L++Y+S+ + + SK+ + +S+S+ E ED + E ++
Sbjct: 62 DDQFILDDYDSDADERMAS--SKKLSDISGLSTSTLELLERFKEQFSAPVEDEIGHEDDD 119
Query: 219 VLKVYFCSRTHSQLSQFIKELRK------------TVFAN------EIKVVCLGSRKNFC 260
V K+++CSRTHSQLSQF ELR+ T AN +K + LGSRKN C
Sbjct: 120 V-KIFYCSRTHSQLSQFSSELRRVKMPSSMPAELSTSDANTDEVQERVKHLTLGSRKNLC 178
Query: 261 INEEVLRLGNSTHINERCLELQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHK--- 317
IN +V+ LGN+ INERCLELQ + AE + CP L S +
Sbjct: 179 INPKVMSLGNAAAINERCLELQQP---------GIAAEKR---------CPYLPSKEDEG 220
Query: 318 --LQKGFRNEISQQGALDIEDLVHLGRHMRTCPYYGSRSMVPTAD--------LVVLPYQ 367
LQ FR+ + DIED+ LG+ M CPYY SRS++ ++ +V LPY
Sbjct: 221 QILQ--FRDH-TLATIKDIEDMGKLGKRMGICPYYASRSVLKHSENVLLKAQKIVTLPYP 277
Query: 368 SLLSKSARESLGLNLKNNIVIIDEAHNLADSLINMYNAKITLSQLENVHSHLEKYFGRFC 427
LL +SAR++L L++KN++VIIDEAHNL D++ N+++ I LSQL+ L Y +
Sbjct: 278 LLLQRSARDALDLSIKNHVVIIDEAHNLMDAICNIHSVTIRLSQLQTALLQLTTYAHKHK 337
Query: 428 SLLGPGNRRYIQTLMVFTRAFLQVLLKEKDENDVRQDSENSTGAKHAFDSSVAINEFLFS 487
+ L NR YI ++ + +R + G + +V ++ +
Sbjct: 338 ARLKGKNRSYIAQIIRLV-------------SSIRDHLRSILGQNLPAEGTVDPSDLMAG 384
Query: 488 LNIDNINLVKLLKYIKESNIIHKVSGYGDKAASLQKGSVLKDGGENYEEGSILSGFQSLV 547
+D IN KL +Y++ES + KV GY + + + S ++ +L QS
Sbjct: 385 KGVDQINPYKLSRYLQESKLARKVDGYVEFLKNKNQQS------DDKPSSPVLFLVQSF- 437
Query: 548 DMLISLTNNDGDGRIIISKARPISSGQQGQQGGYLKYVMLTGEKVFSEIVEQAHAVILAG 607
L+SL N +GR K L+Y++L F EIVE A AVILAG
Sbjct: 438 --LLSLMNPSAEGRFFYLKC---------HDDIQLRYMLLDPTNQFREIVEDARAVILAG 486
Query: 608 GTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFDFSYGSRSSS 667
GT+ P+ + R LF +++P++ FS H++PPE+++ L G G FDF+Y SR S
Sbjct: 487 GTMSPMSDYRNHLFSYIAPSRLDTFSYGHVIPPENLIAHTLVNGVLGSEFDFTYDSRDSE 546
Query: 668 AMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAW-------KSLGILDRIMKKKHV 720
MI +LG + L +P+G++ FFPS++Y+ R+ W K IL I ++K +
Sbjct: 547 KMILDLGRTVATLCQAIPDGVVAFFPSYDYLSRIVAIWRKPLEGEKGETILSLIEREKSI 606
Query: 721 FREPRG-NTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGMG 779
E R + +L+EY +TID+ GA+LL+VVGGK+SEGINFSD +G
Sbjct: 607 LYEGRDMGPKTDDLLQEYTRTIDS-----------GQGALLLSVVGGKLSEGINFSDKLG 655
Query: 780 RCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSCR 839
R ++++GLP+P+ + +I+++E KT N+S+ D Q+ +
Sbjct: 656 RGVLIIGLPFPNIRSAVWQAKIQYVE------QKTYNSSSGS---EKDRQS------IAK 700
Query: 840 GRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWIK 899
GK++YEN CM+AVNQ IGRAIRH ND+AAI+++D RY + + KLP WIK
Sbjct: 701 AAGKDFYENACMRAVNQCIGRAIRHRNDYAAIVMIDRRYEKANIQ-------GKLPAWIK 753
Query: 900 DRLV 903
+ ++
Sbjct: 754 ESML 757
>sp|A7ERG1|CHL1_SCLS1 ATP-dependent RNA helicase CHL1 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=CHL1 PE=3 SV=1
Length = 902
Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust.
Identities = 298/967 (30%), Positives = 471/967 (48%), Gaps = 146/967 (15%)
Query: 16 PYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQKY 75
PY PY IQ FM+ +Y LE G + +LESPTGTGK+LS+IC +L W+ D K+K+ +
Sbjct: 22 PYTPYPIQEKFMQTVYDVLEQGKIGILESPTGTGKSLSLICGSLTWLRDFKRKE-----F 76
Query: 76 ETMIKSDHSFTNNGDCSSNDEPDWMRNFVVNRDFQAEDAKIKKKKNGCGLGKTGERK--- 132
E ++ N +++EP+WM E AK++KK+ G + ERK
Sbjct: 77 EGIL--------NDGFENSEEPEWM----------IEAAKVRKKRELIGRREEMERKLGR 118
Query: 133 ----------HREISTDTFSHSMEKDKCFTKKECENLQSINDQSELSDEEFLLEEYESEE 182
+ + ++ K E + + N +E +EFLLE++ES+
Sbjct: 119 IRERERCERDRMSGNGNGNMRGGKRRKVGGDGEGDLVGGSNGSNE---DEFLLEDWESD- 174
Query: 183 EGAIGGGKSKRKAGAGTISSSSDEEEED-GLDEEGEEVLKVYFCSRTHSQLSQFIKELRK 241
G IGG K+ S + E ++ G+ + + F S+T E K
Sbjct: 175 -GEIGGSGKKKTGDEAIFSKETLELKKSIGMWKFPSPMPLEEFPSKT--------TEKDK 225
Query: 242 TVFANEIKVVCLGSRKNFCINEEVLRLGNSTHINERCLELQNKKKNEICKIKNLGAEGKV 301
++ + LGSRKN CIN +V +L + T INERC ELQ + K +L +
Sbjct: 226 DNLHEHLRHLPLGSRKNLCINPKVNKLNSVTAINERCAELQQSSTPKEHKCPHLPNKDNK 285
Query: 302 RRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDLVHLGRHMRTCPYYGSRSMVPTADL 361
F R H L DIED+ LG+ + CPYY SRS + A++
Sbjct: 286 PLVSTF------RDHALAT----------IRDIEDMGALGKEISICPYYASRSAIKPAEI 329
Query: 362 VVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNLADSLINMYNAKITLSQLENVHSHLEK 421
V LPY LL KSARE+LG++LK ++VIIDEAHNL D++ +Y +++L +L+ L
Sbjct: 330 VTLPYPLLLQKSAREALGISLKGHVVIIDEAHNLMDAIAGIYGTEMSLKELKLAKEMLGN 389
Query: 422 YFGRFCSLLGPGNRRYIQTLMVFTRAFLQVLLKEKDENDVRQDSENSTGAKHAFDSSVAI 481
YF +F L NR Y+ + + + L+K + ++ D V
Sbjct: 390 YFMKFAKRLKGKNRIYVAQAIRVVDSLMGYLMKRLEGTEI--------------DGVVDQ 435
Query: 482 NEFLFSLNIDNINLVKLLKYIKESNIIHKVSGYGDKAASLQKGSVLKDGGENYEEGSILS 541
E L D I+L KL++Y++ES + KV Y + ++++ S + + + S
Sbjct: 436 KELLAGKGADQIDLFKLIRYLQESKLARKVESYTEHTRNIKQASTIPHNNKETPK-STTP 494
Query: 542 GFQSLVDMLISLTNNDGDGRIIISKARPISSGQQGQQGGYLKYVMLTGEKVFSEIVEQAH 601
+L +L++LT+ +G++ K+ S LK+ +L F IV A
Sbjct: 495 ILHTLTSLLLALTHPTTEGQLFFLKSTSTSPSPSPDL-ITLKFQLLNPAPHFESIVSSAR 553
Query: 602 AVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFDFSY 661
A+ILAGGT+ P + LFP + +K SC H++P + +S GPTG F +++
Sbjct: 554 AIILAGGTMSPFSDYTSILFPSIPSHKITTLSCGHVIPKTHLFASTVSRGPTGIPFKWTF 613
Query: 662 GSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVY------------------G 703
+R ++ M++ELG +L N+ ++VP+G++VFFPS+ ++ + G
Sbjct: 614 ANRGNTDMMDELGRVLLNVCTIVPDGVVVFFPSYNFLSTILYRFSIPSSGTGSATATATG 673
Query: 704 AWKSLG--ILDRIMKKKHVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLL 761
K G IL+R+ +KK +F+E + + VE++L Y K+I GA+L
Sbjct: 674 TEKGKGKTILERLSEKKPIFQESKEES-VETILAAYAKSI-----------AEGKGALLF 721
Query: 762 AVVGGKISEGINFSDGMGRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASD 821
+VVGGK+SEGINFSD +GRC+++VGLP+P+ E R++ IE ++ + L + +
Sbjct: 722 SVVGGKLSEGINFSDALGRCVMIVGLPFPNMHTAEWKRRLRFIE---ESAVERLTSFYQE 778
Query: 822 AYYNGDAQAGFG------------------ILRSCRGRGKEYYENLCMKAVNQSIGRAIR 863
N G IL+ +G ++Y+EN+CM+AVNQ +GRAIR
Sbjct: 779 KESNNKDGNGNEEEGNGKKKENREKIQRDQILQQAKGEARDYFENVCMRAVNQCVGRAIR 838
Query: 864 HINDHAAILLVDLRYASESSKRSCSHPANKLPRWIKDRLVS----STNNYGEVHRLLHQF 919
H D A ILL+D RY E KL WI++ ++ + G RL+
Sbjct: 839 HRGDWAGILLLDERYKGERV-------VGKLAGWIREGVLRGEGMGMGDAGGFGRLMGGL 891
Query: 920 FKFNKNR 926
+F + R
Sbjct: 892 GRFCRGR 898
>sp|A5DUW8|CHL1_LODEL ATP-dependent RNA helicase CHL1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=CHL1 PE=3 SV=1
Length = 892
Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust.
Identities = 299/967 (30%), Positives = 448/967 (46%), Gaps = 158/967 (16%)
Query: 16 PYKPYSIQTDFMKALYCSLENG-GVSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQK 74
PY PY IQ FM ALY +L+NG + M ESPTGTGKTLSIICS++ W+ D K+ K
Sbjct: 18 PYDPYDIQLQFMDALYETLQNGYKIGMFESPTGTGKTLSIICSSMTWLRDYKRNYNLNTK 77
Query: 75 YETMIKSDHSFTNNGDCSSND-----------------------------EPDWMRNFVV 105
+ + +NN D + + EP+W++
Sbjct: 78 L-----LEGNVSNNDDKQAGEDHEGTKGKDDDDDDDDDDDDDDDDDDDDDEPEWVK---- 128
Query: 106 NRDFQAEDAKIKKKKNGCGLGKTGERKHREISTDTFSHSMEKDK-CFTKKECENLQSIND 164
+ + + K KN K ER E+ + ++K+K + N+
Sbjct: 129 ---MAYQKSIVDKSKNKL---KDFERHLNEVD-QAYKRRVQKNKEANLGTKIRNVARKQQ 181
Query: 165 QSELSDEEFLLEEY-ESEEEGAIGGGKSKR-----------------KAGAGTISSSSDE 206
E +E FL +Y E+ +E I +S+ G+G+ +
Sbjct: 182 TQEDPEESFLPNDYNETNQESFINDVESRNLQLSTEIERLMKSSIINNNGSGSNAVDDAA 241
Query: 207 EEEDGLDEEGEEVLKVYFCSRTHSQLSQFIKELRKTVF-------ANEIKVVCLGSRKNF 259
+ E K++F SRTHSQL+QF +LR T F K + LGSRK
Sbjct: 242 AAAAAAATDDECPTKIFFTSRTHSQLNQFSSQLRLTKFDASFKDLEERTKYLPLGSRKQL 301
Query: 260 CINEEVLRLGNSTHINERCLELQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQ 319
CIN++V IN+ C++LQ KK + TK F+
Sbjct: 302 CINDKVKNRKGEQSINDACIDLQKTKKGCTYLPNPSNSSTISSATKEFA----------- 350
Query: 320 KGFRNEISQQGALDIEDLVHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLG 379
++S DIEDL LG + TCPYY R + A+++ LPYQ LL +R++L
Sbjct: 351 -----DLSLAQIRDIEDLGDLGSSLHTCPYYSVREGIKLAEVISLPYQLLLQSGSRDALK 405
Query: 380 LNLKNNIVIIDEAHNLADSLINMYNAKITLSQLENVHSHLEKYFGRFCSLLGPGNRRYIQ 439
L++KN+I+IIDEAHN+ D+L ++Y+ KIT +QL L+ Y +F L GNR +
Sbjct: 406 LDIKNSIIIIDEAHNIFDTLTSLYSVKITAAQLSRTIKALKIYMTKFLKKLNSGNRINLM 465
Query: 440 TLMVFTRAFLQVLLKEKDENDVRQDSENSTGAKHAFDSSVAINEFLFSLNI-DNINLVKL 498
L + + L S AK A + E +F + D +N+ K+
Sbjct: 466 KLTKLCKLLMDFL--------------QSDLAKSAKLGDQVVGEEIFQGSTGDLVNIHKM 511
Query: 499 LKYIKESNIIHKVSGYGDKAASLQKGSVLKDGGENYEEGSILSGFQSLVDMLISLTNNDG 558
Y+ +S I K+ Y +K ++D G +++ S +V L L+
Sbjct: 512 EAYLNKSKIAFKLQSYMEKIG-------VEDVGTDFKLNSSSPILFDIVKFLKCLSYPKK 564
Query: 559 DGRIIISKARPISSGQQGQQGGYLKYVMLTGEKVFSEIVEQAHAVILAGGTLQPIEETRE 618
+G+ + G G L Y++L VF EIV+QA VIL GGT++P + +
Sbjct: 565 EGKFFWDRIY----GDNGGCEVSLNYMLLDPCAVFKEIVDQAKCVILCGGTMEPTSDFTD 620
Query: 619 RLFPWLSPNKFHFFSCSHIVPPES--ILPVALSCGPTGKSFDFSYGSRSSSAMIEELGLL 676
LFP + NK F+C HI+P + ++PV G +FDF Y R+ + LG
Sbjct: 621 YLFPSIKHNKIKKFACGHIIPKNNLKVIPVGQYYG----NFDFLYNRRNDLDQFKRLGEF 676
Query: 677 LCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKKHVFREPRGNTHVESVLKE 736
L + +VP GI+VF S++ + + W+ I R+ K VF E NT + S+L E
Sbjct: 677 LIKICEIVPAGIVVFISSYQLLSDIVKIWRETTIYSRLNLLKQVFEESVENTKLTSLLSE 736
Query: 737 YQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGMGRCIVMVGLPYPSPSNIE 796
Y I+ T GA+LLAVVGGK+SEGINFSD + R ++MVG+PYP+ + E
Sbjct: 737 YSYVIN----------TQCKGAILLAVVGGKMSEGINFSDNLARAVIMVGMPYPNAFSGE 786
Query: 797 LLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSCRGRGKEYYENLCMKAVNQ 856
++ + IE T G ++ R + EYY+NLCMKAVNQ
Sbjct: 787 IVAKRNFIEEQVITKG--------------------GTIQQARAKSYEYYDNLCMKAVNQ 826
Query: 857 SIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWIKDRLVSSTN-NYGEVHRL 915
SIGR+IRH D+A I+L+D RY + + KL +W++DR+ ++T N +
Sbjct: 827 SIGRSIRHAKDYAIIILLDYRYQTPKVQ-------GKLSKWVRDRIANNTTANTFDPFLE 879
Query: 916 LHQFFKF 922
+FF F
Sbjct: 880 TKKFFSF 886
>sp|A6ZWN8|CHL1_YEAS7 ATP-dependent RNA helicase CHL1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=CHL1 PE=3 SV=1
Length = 861
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 302/961 (31%), Positives = 463/961 (48%), Gaps = 175/961 (18%)
Query: 16 PYKPYSIQTDFMKALYCSLENGG-VSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQK 74
PYKPY IQ M+ +Y L G +++LESPTGTGKTLS+IC+ + W+ + K +
Sbjct: 13 PYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWL--RMNKADIFTR 70
Query: 75 YETMIKSDHSFTNNGDCSSNDEPDWMRNFVVNRDFQAEDAKIKKKKNGCGLGKTGERKHR 134
ET IK++ + N S+DEPDW+ + Q + L E+
Sbjct: 71 METNIKTNEDDSEN---LSDDEPDWVIDTYRKSVLQEK----------VDLLNDYEKHLN 117
Query: 135 EISTDTFSHSMEKDKCFTKKECENLQSIND-----------QSELSDEEFLLEEYESEEE 183
EI+T S K C KE +S++ L +++F+ YES+ E
Sbjct: 118 EINTT--SCKQLKTMCDLDKEHGRYKSVDPLRKKRKGARHLDVSLEEQDFIPRPYESDSE 175
Query: 184 ------GAIGGGKSKRKAGAGTISS-------------SSDEEEEDGLDEEGEEVLKVYF 224
GG S + ++S S D D D + +K+Y+
Sbjct: 176 NNDTSKSTRGGRISDKDYKLSELNSQIITLLDKIDGKVSRDPNNGDRFDVTNQNPVKIYY 235
Query: 225 CSRTHSQLSQFIKELRKTVFAN---------EIKVVCLGSRKNFCINEEVLRLGNSTHIN 275
SRT+SQL QF +LR F + ++K + L S+K CIN +V++ IN
Sbjct: 236 ASRTYSQLGQFTSQLRLPSFPSSFRDKVPNEKVKYLPLASKKQLCINPKVMKWKTLEAIN 295
Query: 276 ERCLELQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIE 335
+ C +L++ K E C + T + CP + L+ +EI DIE
Sbjct: 296 DACADLRHSK--EGCMF--------YQNTNEWRHCP--DTLALRDMIFSEIQ-----DIE 338
Query: 336 DLVHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNL 395
DLV LG+ + CPYY SR +P A++V LPYQ LLS+S R SL +NL+N+IVIIDEAHNL
Sbjct: 339 DLVPLGKSLGICPYYASREALPIAEVVTLPYQYLLSESTRSSLQINLENSIVIIDEAHNL 398
Query: 396 ADSLINMYNAKITLSQLENVHSHLEKYFGRFCSLLGPGNRRYIQTLMVFTRAFLQVLLK- 454
+++ ++Y+++I+L L+N H + YF +F S L PGNR + L +Q ++K
Sbjct: 399 IETINSIYSSQISLEDLKNCHKGIVTYFNKFKSRLNPGNRVNLLKLNSLLMTLIQFIVKN 458
Query: 455 ------EKDENDVRQDSENSTGAKHAFDSSVAINEFLFSLNIDNINLVKLLKYIKESNII 508
E D ND+ TG+ NID +N+ KLL+YIK S I
Sbjct: 459 FKKIGQEIDPNDM------FTGS-----------------NIDTLNIHKLLRYIKVSKIA 495
Query: 509 HKVSGYGDKAASLQKGSVLKDGGENYEEGSILSGFQSLV----DMLISLTNNDGDGRIII 564
+K+ Y ++A ++ S ++ + + S+ S Q L+ L LTN +G+
Sbjct: 496 YKIDTY-NQALKEEESSKNENPIKETHKKSVSS--QPLLFKVSQFLYCLTNLTSEGQFFF 552
Query: 565 SKARPISSGQQGQQGGYLKYVMLTGEKVFSEIVEQAHAVILAGGTLQPIEETRERLFPWL 624
K I KY++L K F I+ QA V+LAGGT++P+ E L P +
Sbjct: 553 EKNYSI------------KYMLLEPSKPFESILNQAKCVVLAGGTMEPMSEFLSNLLPEV 600
Query: 625 SPNKFHFFSCSHIVPPESILPVALSCGPTGKSFDFSYGSRSSSAMI-EELGLLLCNLVSV 683
SC+H++P E+ L ++ P +F++ R S +++ L +L
Sbjct: 601 PSKDITTLSCNHVIPKEN-LQTYITNQP---ELEFTFEKRMSPSLVNNHLFQFFVDLSKA 656
Query: 684 VPE--GIIVFFPSFEYVERVYGAWKSLGILDRIMKKKHVFREPRGNTHVESVLKEYQKTI 741
VP+ GI+ FFPS++Y+ V WK + + +F E + + +L Y ++
Sbjct: 657 VPKKGGIVAFFPSYQYLAHVIQCWKQNDRFATLNNVRKIFYEAKDG---DDILSGYSDSV 713
Query: 742 DTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGMGRCIVMVGLPYPSPSNIELLERI 801
G++LLA+VGGK+SEGINF D + R +VMVGLP+P+ + EL+ +
Sbjct: 714 -----------AEGRGSLLLAIVGGKLSEGINFQDDLCRAVVMVGLPFPNIFSGELIVKR 762
Query: 802 KHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSCRGRGKEYYENLCMKAVNQSIGRA 861
KH+ A+ +G G KE+ EN+CMKAVNQS+GRA
Sbjct: 763 KHL--------------AAKIMKSG------GTEEEASRATKEFMENICMKAVNQSVGRA 802
Query: 862 IRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWIKDRLVSSTNNYGEVHRLLHQFFK 921
IRH ND+A I L+D+RY + ++ KL RW++D S N+ H+++ K
Sbjct: 803 IRHANDYANIYLLDVRYNRPNFRK-------KLSRWVQD----SINSEHTTHQVISSTRK 851
Query: 922 F 922
F
Sbjct: 852 F 852
>sp|P22516|CHL1_YEAST ATP-dependent RNA helicase CHL1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CHL1 PE=1 SV=1
Length = 861
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 301/961 (31%), Positives = 463/961 (48%), Gaps = 175/961 (18%)
Query: 16 PYKPYSIQTDFMKALYCSLENGG-VSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQK 74
PYKPY IQ M+ +Y L G +++LESPTGTGKTLS+IC+ + W+ + K +
Sbjct: 13 PYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWL--RMNKADIFTR 70
Query: 75 YETMIKSDHSFTNNGDCSSNDEPDWMRNFVVNRDFQAEDAKIKKKKNGCGLGKTGERKHR 134
ET IK++ + N S+DEPDW+ + Q + L E+
Sbjct: 71 METNIKTNEDDSEN---LSDDEPDWVIDTYRKSVLQEK----------VDLLNDYEKHLN 117
Query: 135 EISTDTFSHSMEKDKCFTKKECENLQSIND-----------QSELSDEEFLLEEYESEEE 183
EI+T S K C KE +S++ L +++F+ YES+ E
Sbjct: 118 EINTT--SCKQLKTMCDLDKEHGRYKSVDPLRKKRKGARHLDVSLEEQDFIPRPYESDSE 175
Query: 184 ------GAIGGGKSKRKAGAGTISS-------------SSDEEEEDGLDEEGEEVLKVYF 224
GG S + ++S S D D D + +K+Y+
Sbjct: 176 NNDTSKSTRGGRISDKDYKLSELNSQIITLLDKIDGKVSRDPNNGDRFDVTNQNPVKIYY 235
Query: 225 CSRTHSQLSQFIKELRKTVFAN---------EIKVVCLGSRKNFCINEEVLRLGNSTHIN 275
SRT+SQL QF +LR F + ++K + L S+K CIN +V++ IN
Sbjct: 236 ASRTYSQLGQFTSQLRLPSFPSSFRDKVPDEKVKYLPLASKKQLCINPKVMKWKTLEAIN 295
Query: 276 ERCLELQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIE 335
+ C +L++ K+ I + T + CP + L+ +EI DIE
Sbjct: 296 DACADLRHSKEGCIF----------YQNTNEWRHCP--DTLALRDMIFSEIQ-----DIE 338
Query: 336 DLVHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNL 395
DLV LG+ + CPYY SR +P A++V LPYQ LLS+S R SL +NL+N+IVIIDEAHNL
Sbjct: 339 DLVPLGKSLGICPYYASREALPIAEVVTLPYQYLLSESTRSSLQINLENSIVIIDEAHNL 398
Query: 396 ADSLINMYNAKITLSQLENVHSHLEKYFGRFCSLLGPGNRRYIQTLMVFTRAFLQVLLK- 454
+++ ++Y+++I+L L+N H + YF +F S L PGNR + L +Q ++K
Sbjct: 399 IETINSIYSSQISLEDLKNCHKGIVTYFNKFKSRLNPGNRVNLLKLNSLLMTLIQFIVKN 458
Query: 455 ------EKDENDVRQDSENSTGAKHAFDSSVAINEFLFSLNIDNINLVKLLKYIKESNII 508
E D ND+ TG+ NID +N+ KLL+YIK S I
Sbjct: 459 FKKIGQEIDPNDM------FTGS-----------------NIDTLNIHKLLRYIKVSKIA 495
Query: 509 HKVSGYGDKAASLQKGSVLKDGGENYEEGSILSGFQSLV----DMLISLTNNDGDGRIII 564
+K+ Y ++A ++ S ++ + + S+ S Q L+ L LTN +G+
Sbjct: 496 YKIDTY-NQALKEEESSKNENPIKETHKKSVSS--QPLLFKVSQFLYCLTNLTSEGQFFF 552
Query: 565 SKARPISSGQQGQQGGYLKYVMLTGEKVFSEIVEQAHAVILAGGTLQPIEETRERLFPWL 624
K I KY++L K F I+ QA V+LAGGT++P+ E L P +
Sbjct: 553 EKNYSI------------KYMLLEPSKPFESILNQAKCVVLAGGTMEPMSEFLSNLLPEV 600
Query: 625 SPNKFHFFSCSHIVPPESILPVALSCGPTGKSFDFSYGSRSSSAMI-EELGLLLCNLVSV 683
SC+H++P E+ L ++ P +F++ R S +++ L +L
Sbjct: 601 PSEDITTLSCNHVIPKEN-LQTYITNQP---ELEFTFEKRMSPSLVNNHLFQFFVDLSKA 656
Query: 684 VPE--GIIVFFPSFEYVERVYGAWKSLGILDRIMKKKHVFREPRGNTHVESVLKEYQKTI 741
VP+ GI+ FFPS++Y+ V WK + + +F E + + +L Y ++
Sbjct: 657 VPKKGGIVAFFPSYQYLAHVIQCWKQNDRFATLNNVRKIFYEAKDG---DDILSGYSDSV 713
Query: 742 DTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGMGRCIVMVGLPYPSPSNIELLERI 801
G++LLA+VGGK+SEGINF D + R +VMVGLP+P+ + EL+ +
Sbjct: 714 -----------AEGRGSLLLAIVGGKLSEGINFQDDLCRAVVMVGLPFPNIFSGELIVKR 762
Query: 802 KHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSCRGRGKEYYENLCMKAVNQSIGRA 861
KH+ A+ +G G KE+ EN+CMKAVNQS+GRA
Sbjct: 763 KHL--------------AAKIMKSG------GTEEEASRATKEFMENICMKAVNQSVGRA 802
Query: 862 IRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWIKDRLVSSTNNYGEVHRLLHQFFK 921
IRH ND+A I L+D+RY + ++ KL RW++D S N+ H+++ K
Sbjct: 803 IRHANDYANIYLLDVRYNRPNFRK-------KLSRWVQD----SINSEHTTHQVISSTRK 851
Query: 922 F 922
F
Sbjct: 852 F 852
>sp|Q6BZD9|CHL1_DEBHA ATP-dependent RNA helicase CHL1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=CHL1 PE=3 SV=2
Length = 820
Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust.
Identities = 282/922 (30%), Positives = 456/922 (49%), Gaps = 141/922 (15%)
Query: 16 PYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQKY 75
P++PY IQ M A+Y +++N + + ESPTGTGKTLS+ICS++ W+ + K+
Sbjct: 19 PFEPYDIQIQLMDAIYDAIDNYKIGLFESPTGTGKTLSLICSSMTWLREYKK-------- 70
Query: 76 ETMIKSDHSFTNNGDCSSNDEPDWMRNFVVNRDFQAEDAKIKKKKNGCGLGKTGERKHRE 135
+ +F D S DEP+W V + +Q A K + + ER +
Sbjct: 71 ------NSTFRETEDSESEDEPEW-----VKQAYQKTIANRTKVR-----AQEYERLLDD 114
Query: 136 ISTDTFSHSMEKDKCFTKKECENLQSINDQSELSDEEFLLEEYESEEEGAIGGGKSKRKA 195
+S + + + K +K+ + + +Q DE F+ +Y S+ E K +
Sbjct: 115 LSEN---YDVSKVSVLPEKKVKRQKPEQEQ----DENFIPADYYSDSELDSKYENDKLTS 167
Query: 196 GAGTISSSSDEEEEDGLDEEGEEVLKVYFCSRTHSQLSQFIKELRKTVFAN-------EI 248
+ S D +E ++ + +K++F SRTHSQLSQF +L T F + I
Sbjct: 168 EINELLSRVDGPKE-TVEPVNDCPVKIFFSSRTHSQLSQFSHQLNMTEFESSLDNIPERI 226
Query: 249 KVVCLGSRKNFCINEEVLRLGNSTHINERCLELQNKKKNE---ICKIKNLGAEGKVRRTK 305
K L SRK CI+ ++ +L N + IN+ C++LQ KN I K+ N +E V++
Sbjct: 227 KFSPLASRKQLCIHPKISKLSNVSSINDACIDLQQSSKNSCEYIPKLHNTQSEEIVKK-- 284
Query: 306 AFSGCPVLRSHKLQKGFRNEISQQGALDIEDLVHLGRHMRTCPYYGSRSMVPTADLVVLP 365
FS + H DIEDL LG ++ CPYY R + +++ LP
Sbjct: 285 -FSDLSFTKIH----------------DIEDLGKLGNKLKICPYYSVRKGIDVTEIIALP 327
Query: 366 YQSLLSKSARESLGLNLKNNIVIIDEAHNLADSLINMYNAKITLSQLENVHSHLEKYFGR 425
YQ LL S R +L LN+ ++I+IIDEAHNL D + ++Y+ IT ++L ++ L+ Y +
Sbjct: 328 YQMLLQDSTRSALNLNIDDSIIIIDEAHNLLDVISSIYSVSITSNELSDITKSLKFYLNK 387
Query: 426 FCSLLGPGNRRYIQTLMVFTRAFLQVLLKEKDENDVRQDSENSTGAKHAFDSSVAINEFL 485
F L GNR I L+ + + + S NS K + ++
Sbjct: 388 FIKRLNSGNRINIMKLIKLCQVLEKFI------------SSNSKDGKIKHGDEIITSDIF 435
Query: 486 FSLNIDNINLVKLLKYIKESNIIHKVSGYGDKAASLQKGSVLKDGGENYEEGSILSGFQS 545
D +N+ K+ +++ +S I +K+ Y K + E+ + S F+
Sbjct: 436 EGTTGDLVNIHKIEQFLNKSKIAYKIESYMQKL----------NDSESIKNRSNPLLFK- 484
Query: 546 LVDMLISLTNNDGDGRIIISKARPISSGQQGQQGGYLKYVMLTGEKVFSEIVEQAHAVIL 605
+ L LTN +G+ K S + Y++L ++F +IV++A V+L
Sbjct: 485 ITKFLKCLTNPSKEGKFFWDKTNDSVS---------INYMLLDPSEIFRDIVKRARCVLL 535
Query: 606 AGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGK----SFDFSY 661
GGT++P+ + LFP++ P + FSC HI+P E+ L P G SF+FS+
Sbjct: 536 CGGTMEPMNDYTNYLFPYIPPEQIKKFSCGHIIPQEN-----LEVFPIGNYNDISFEFSF 590
Query: 662 GSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKKHVF 721
R++S MI ELG + N++ P+GI++FFPS++Y+ V W+ I++ + K K +F
Sbjct: 591 DKRNNSKMIIELGHAILNIIESTPDGIVIFFPSYKYLNVVMNVWRQNKIIESLTKVKAIF 650
Query: 722 REPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGMGRC 781
+EP ++ VE VL +Y T + + + A+LL+VVGGK+SEGINFSD + R
Sbjct: 651 QEPEDSSKVEKVLNDYSST----------NKSEKHSALLLSVVGGKMSEGINFSDELARG 700
Query: 782 IVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSCRGR 841
++M+GLP+P+ + EL+ + K IE A G
Sbjct: 701 VIMIGLPFPNIFSAELIAKRKFIE--------------------ESTIAKGGTKSQAMVN 740
Query: 842 GKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWIKDR 901
K +YEN+CM+AVNQSIGR+IRH ND++ I L D RY S+ + +KL W+K +
Sbjct: 741 AKNFYENICMRAVNQSIGRSIRHKNDYSIIYLFDQRYGSDKIQ-------DKLSGWVKQK 793
Query: 902 LVS--STNNYGEVHRLLHQFFK 921
L + ++ +V + FF+
Sbjct: 794 LFTRGRCTDFNQVIKETQDFFR 815
>sp|Q6CIF0|CHL1_KLULA ATP-dependent RNA helicase CHL1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=CHL1 PE=3 SV=1
Length = 807
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 305/935 (32%), Positives = 460/935 (49%), Gaps = 161/935 (17%)
Query: 16 PYKPYSIQTDFMKALYCSLENGG-VSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQK 74
PY+PY IQT M+ +Y L +G V + ESPTGTGKTLS+ICS + W+ + K +K
Sbjct: 8 PYQPYDIQTQLMEHIYELLNSGKKVGIFESPTGTGKTLSLICSTVTWLREHKL-----EK 62
Query: 75 YETMIKSDHSFTNNGDCSSNDEPDWMRNFVVNRDFQAEDAKIKKKKNGC-GLGKT----- 128
+ + +D+ +++ SS+DEP+W+ F ++ + + +++ +N GL +
Sbjct: 63 LNSKVDNDN-LSDSTFSSSDDEPEWVNQFYNDKIMKEKSKSLQEYENYLEGLSMSNIKPV 121
Query: 129 ------GERKHREISTDTFSHSMEKDKCFTKKECENLQSINDQSELSDEEFLLEEYESEE 182
G+RK ++ +E D+ E S+++Q++ E
Sbjct: 122 LRQLDIGDRKRKKTVPRHIEIEIEDDETNFLPEPYEQDSVSNQNDY-------------E 168
Query: 183 EGAIGGGKSKRKAGAGTISSSSDEEEEDGLDEEGEEVLKVYFCSRTHSQLSQFIKELRKT 242
+G I K A I D + E+ + E + LK+YF SRTHSQL+QF +L
Sbjct: 169 KGQINDEIQKLLA---KIDKGYDVKTENNM--ELKSPLKIYFSSRTHSQLTQFASQLTLP 223
Query: 243 VFA--------NEIKVVCLGSRKNFCINEEVLRLGNSTHINERCLELQNKKKNEICKIKN 294
F IK + L SRK CI+ +V +L S IN+ C+E +++ +
Sbjct: 224 SFPPSSPTLEKERIKFLPLASRKQLCIHAKVSKL-KSDLINDACVETVKRQECQFYTNSR 282
Query: 295 LGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDLVHLGRHMRTCPYYGSRS 354
K R FS EIS DIEDLV LG + CPYY SR+
Sbjct: 283 DLISSKQFRDYTFS----------------EIS-----DIEDLVQLGHSLHVCPYYSSRT 321
Query: 355 MVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNLADSLINMYNAKITLSQLEN 414
+ A++V LPYQ +LS RESLG+NLK++IVIIDEAHNL D++ ++Y+ +I+LS ++
Sbjct: 322 ALEGAEIVTLPYQHILSFEIRESLGINLKDSIVIIDEAHNLMDTITSIYSCEISLSDIKI 381
Query: 415 VHSHLEKYFGRFCSLLGPGNRRYIQTLMVF---TRAFLQVLLKEKDENDVRQDSENSTGA 471
++ Y +F L NR I LM +AF++ ++ E
Sbjct: 382 CKKLMKIYLNKFKRKLNGKNRVNIMKLMKLLDILQAFIESHFEKGKE----------ISP 431
Query: 472 KHAFDSSVAINEFLFSLNIDNINLVKLLKYIKESNIIHKVSGYGDKAASLQKGSVLK--D 529
+ F S N D +N+ +L+ Y++ S I +K+ Y D S LK +
Sbjct: 432 QSMFRDS----------NADLLNIHELVTYMRGSKIAYKIDSYAD--------SKLKSDE 473
Query: 530 GGENYEEGSILSGFQSLVDMLISLTNNDGDGRIIISKARPISSGQQGQQGGYLKYVMLTG 589
N + IL V +SL+N +G ++G +KY++L
Sbjct: 474 SNTNSVKQPILFKISKFV---LSLSNPSFEGSFFF------------EEGMIIKYMLLEP 518
Query: 590 EKVFSEIVEQAHAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALS 649
++F IV + VILAGGT+QP E E L P++ FSC+HI+P ++ +S
Sbjct: 519 NQIFKTIVNDSKCVILAGGTMQPTSEFIENLLPFVPSKDIVQFSCNHIIPESNLDTFIVS 578
Query: 650 CGPTGKSFDFSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLG 709
G F+F+Y SR++ +++ +L L L VP GI+VFFPS+ Y+E V W+
Sbjct: 579 EG-----FNFNYESRNNESVMCKLYDFLLELGCRVPHGIVVFFPSYGYLEHVIKFWQLEE 633
Query: 710 ILDRIMKKKHVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKIS 769
I +++ K +F E G + +L +Y TI L + GA L +VVGGK+S
Sbjct: 634 IFEKLSMNKRIFYETPGGS---DILPQYSSTI--LDKK--------KGAFLFSVVGGKLS 680
Query: 770 EGINFSDGMGRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQ 829
EGINF D + R +VMVGLPYP+ + ELL + +HIE K ++
Sbjct: 681 EGINFQDNLARAVVMVGLPYPNLYSSELLVKKRHIE------QKVIS------------- 721
Query: 830 AGFGILRSCRGRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSH 889
AG G L+ + E+YEN+CMKAVNQSIGRAIRH ND+A I LVD RY + +
Sbjct: 722 AG-GSLKDAKSATIEFYENICMKAVNQSIGRAIRHANDYACIYLVDNRYLNNKVQ----- 775
Query: 890 PANKLPRWIKDRLVSSTNNYGEVHRLLHQFFKFNK 924
+KL W++ R V S E+ FF N+
Sbjct: 776 --HKLSEWVRKR-VKSELKTSEIFAQTSVFFASNR 807
>sp|Q750G3|CHL1_ASHGO ATP-dependent RNA helicase CHL1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CHL1
PE=3 SV=1
Length = 801
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 274/912 (30%), Positives = 444/912 (48%), Gaps = 156/912 (17%)
Query: 16 PYKPYSIQTDFMKALYCSLENGG-VSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQK 74
P+ PY IQ + M+ +Y LE+G + + ESPTGTGKTLS+ICS W+ + K Q
Sbjct: 9 PFTPYRIQLELMQQIYGLLESGKKMGIFESPTGTGKTLSLICSTFTWLREHKAGYLQGS- 67
Query: 75 YETMIKSDHSFTNNGDCSSNDEPDWMRNFVVNRDFQAEDAKIKKKKNGCGLGKTGERKHR 134
+ + + S DEP W++ E+ + + + E++
Sbjct: 68 ---------TGAQDSEEDSEDEPAWVK----------ENYEQSVLADVTASMRAYEQRLA 108
Query: 135 EISTDTFSHSMEKDKCFTKKECENLQSINDQSELSDE--EFLLEEYESEEE----GAIGG 188
+ TD K Q + E D+ EFL + Y S+ E A G
Sbjct: 109 AVDTDLLVKGAAKR-----------QRVEVAVERPDDGAEFLPDAYHSDVEERPSHAGGR 157
Query: 189 GKSKRKAGAGTISSSSDEEEEDGLDEE--GEEVLKVYFCSRTHSQLSQFIKELRKTVFA- 245
G+ +++ A +E D D+ LKVYF SRTH+QL QF +LR F
Sbjct: 158 GQLRKQLDADIKRLLRKLDEPDAADKSRLAANPLKVYFASRTHTQLGQFAAQLRLPQFPP 217
Query: 246 -------NEIKVVCLGSRKNFCINEEVLRLGNSTHINERCLELQNKKKNEICKIKNLGAE 298
+K + LGSRK CI+++V ++ S INE C++ +K + C + E
Sbjct: 218 SLAGLEQERVKFLPLGSRKQLCIHKKVSKV-KSDGINEACMDAVSKSE---CSFFSAARE 273
Query: 299 GKVRRT---KAFSGCPVLRSHKLQKGFRNEISQQGALDIEDLVHLGRHMRTCPYYGSRSM 355
+ R +AFS DIEDLV +G + CPYY SR +
Sbjct: 274 PDIIRQFQDQAFSTIQ---------------------DIEDLVGIGNTLHACPYYSSREL 312
Query: 356 VPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNLADSLINMYNAKITLSQLENV 415
+ A+++ LPYQ LL ++AR+++G++L+++I++IDEAHNL D++ ++++A I+L++L
Sbjct: 313 IEGAEVITLPYQHLLLENARKTMGIDLRDSIIVIDEAHNLIDTINSIHSASISLTELRQC 372
Query: 416 HSHLEKYFGRFCSLLGPGNRRYIQTLMVFTRAFLQVLLKEKDENDVRQDSENSTGAKHAF 475
L+ Y +F + L GNR + L+ Q ++ + +N R +
Sbjct: 373 KLALQAYLAKFKTRLNSGNRVNLLKLIKMVDVLSQ-FIETQYKNGKRINDP--------- 422
Query: 476 DSSVAINEFLFSLNIDNINLVKLLKYIKESNIIHKVSGYGDKAASLQKGSVLKDGGENYE 535
N+ ++D +N+ KL KY+K S + +K+ Y S + L+D G
Sbjct: 423 ------NDIFMGTSMDVVNIHKLEKYMKTSKVAYKIDKYIQATTS----NDLQDRGSRDI 472
Query: 536 EGSILSGFQSLVDMLISLTNNDGDGRIIISKARPISSGQQGQQGGYLKYVMLTGEKVFSE 595
+ IL S L +L N +G+ + G LKY++L +V
Sbjct: 473 KQPILFKVASF---LKTLANPSEEGQFFF------------ENGHVLKYMLLEPSEVLKS 517
Query: 596 IVEQAHAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGK 655
IV +A VILAGGT++P+ + +L P+L+P +SC H++P +++ +S +
Sbjct: 518 IVTEAKCVILAGGTMEPVNDFFTQLVPYLAPTDVTTYSCGHVIPDDNLNAFIVS-----E 572
Query: 656 SFDFSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIM 715
+F+F++ +R A+IE L + L S VP G++VFF S++Y++ V W G+L R+
Sbjct: 573 NFEFTFANREDIALIERLFHFIYQLASRVPFGMVVFFSSYKYIDFVVKTWTDRGLLSRLD 632
Query: 716 KKKHVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFS 775
K ++ E VLK Y +TI + GA+LLAVVGG++SEGINF
Sbjct: 633 AIKRIYHETSDGA---DVLKGYSETIQSEK----------KGAILLAVVGGRLSEGINFE 679
Query: 776 DGMGRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGIL 835
+ + R +V+VGLP+P+ + E++ + +HI+ NG Q
Sbjct: 680 NELARAVVLVGLPFPNMFSGEMIVKQQHIK--------------EKVIRNGGTQ------ 719
Query: 836 RSCRGRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLP 895
+E+YEN+CMKAVNQS+GRAIRH +D A + L+D RY+ ++ KL
Sbjct: 720 EDVNKAVREFYENICMKAVNQSVGRAIRHASDFANVYLIDKRYSGPRIQQ-------KLS 772
Query: 896 RWIKDRLVSSTN 907
W++ R+ S++N
Sbjct: 773 DWVRKRIQSASN 784
>sp|A7TTL0|CHL1_VANPO ATP-dependent RNA helicase CHL1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=CHL1 PE=3 SV=1
Length = 829
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 286/924 (30%), Positives = 458/924 (49%), Gaps = 153/924 (16%)
Query: 16 PYKPYSIQTDFMKALYCSLENGG-VSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQK 74
PY+PY IQ M+ +Y +L +G +++LESPTGTGKTLS++CS++ W+ D K +
Sbjct: 8 PYQPYEIQLQLMQCIYGALSSGKKIAILESPTGTGKTLSLLCSSITWLRDNKLHLLSQN- 66
Query: 75 YETMIKSDHSFTNNGDCSSND-------------EPDWMRNFVVNRDFQAE--DAKIKKK 119
NNG + N EP+W VN + + D K+
Sbjct: 67 -----------LNNGGIAINSSIELSDDDDFSDDEPNW-----VNESYNSSILDNKLLAL 110
Query: 120 KNGCGLGKTGERKHREISTDTFSHSMEKDKCFTKKECENLQSINDQSELSDEEFLLEEYE 179
+ T KH +I + + +K +++ E++ ++ E ++++ + E
Sbjct: 111 NDYEKHLDTIANKHYKIDKNLIGNDNNNNKV-KRRKIEHIPVGFEEDEFLPQDYISDSEE 169
Query: 180 SEEEGAIGGGKSKRKAGAGTISSSSDEEEEDGLDEEGEEVLKVYFCSRTHSQLSQFIKEL 239
E+ + + A S S+DE+ + +K++F SRTHSQL QF +L
Sbjct: 170 LEQTKSEALSNEVKALLAKLDSKSNDEQTTSTELLQELNPVKIFFASRTHSQLKQFASQL 229
Query: 240 RKTVF---------ANE-IKVVCLGSRKNFCINEEVLRLGNSTH-INERCLELQNKKKNE 288
+ F +NE +K + LGSRK CIN+ + ST IN+ C EL +K
Sbjct: 230 KLPKFKSSFDEKFVSNERLKYLPLGSRKQLCINKSITSKWKSTEAINDACKELLQSEK-- 287
Query: 289 ICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDLVHLGRHMRTCP 348
GCP + FR+ + G DIED++ LG + CP
Sbjct: 288 --------------------GCPYHNKNTSNTLFRDHVFT-GVHDIEDILALGESLNVCP 326
Query: 349 YYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNLADSLINMYNAKIT 408
YY +R + +A+++ LPYQ LLS+S R+SL ++L N+IVI+DEAHNL D++ ++++ I+
Sbjct: 327 YYATRDSITSAEIITLPYQYLLSESTRDSLNIDLSNSIVIVDEAHNLIDTINTIHSSHIS 386
Query: 409 LSQLENVHSHLEKYFGRFCSLLGPGNRRYIQTLMVFTRAFLQVLLKEKDENDVRQDSENS 468
L +L+ L+ YF +F S L GNR + L+ ++ + ++N + E
Sbjct: 387 LQELKTCQIGLQMYFAKFKSRLNAGNRVNLLKLIKLLDILIEYI----NKNFKKSGQE-- 440
Query: 469 TGAKHAFDSSVAINEFLFSLNIDNINLVKLLKYIKESNIIHKVSGYGDKAASLQKGSVLK 528
++ NE + N D +N+ KL ++IK S I +K+ Y + SL K S
Sbjct: 441 ----------ISANEIFNNTNADTLNIHKLNQFIKVSKIAYKIDTYLN---SLSKES--- 484
Query: 529 DGGENYEEGSILSG--FQSLVDMLISLTNNDGDGRIIISKARPISSGQQGQQGGYLKYVM 586
EN EE S + L SLTN + +G+ K + I KY++
Sbjct: 485 -DNENNEESKNKSTPLLFKVASFLSSLTNPNEEGKFFFEKNKSI------------KYML 531
Query: 587 LTGEKVFSEIVEQAHAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPV 646
L + F I+++A VILAGGT++PI + + LFP + +K F+C H++P +++
Sbjct: 532 LEPSQSFKSILDEARCVILAGGTMEPISDFFDNLFPDIIKDKSVTFACDHVIPDDNLNTY 591
Query: 647 ALSCGPTGKSFDFSYGSRSSSAMI-EELGLLLCNLVSVVPE--GIIVFFPSFEYVERVYG 703
+ F+F++ R + ++ + L L VP GI+ FFPS+ Y++ V
Sbjct: 592 IIE----EPKFEFTFDKRQNPELVNKHLFQFFIKLSVNVPPTGGIVAFFPSYSYLQFVID 647
Query: 704 AWKSLGILDRIMKKKHVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAV 763
W+S G+ D++ K + +F E + + L EY K I+ N A+L AV
Sbjct: 648 NWRSNGLFDKLNKIREIFYESKNGS---DPLDEYIKVIEA-----------RNPAILFAV 693
Query: 764 VGGKISEGINFSDGMGRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAY 823
VGGK+SEGINF D + R +VM GLPYP+ + ELL + HIE +K L
Sbjct: 694 VGGKLSEGINFQDDLCRAVVMTGLPYPNVMSGELLIKKNHIE------TKILK------- 740
Query: 824 YNGDAQAGFGILRSCRGRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESS 883
NG ++A SC K++++ +CMKAVNQS+GRAIRHI+D++ I L+D RY++
Sbjct: 741 -NGGSKADV----SC--ATKDFFDTICMKAVNQSVGRAIRHIDDYSNIYLLDQRYSNSKI 793
Query: 884 KRSCSHPANKLPRWIKDRLVSSTN 907
K +KL +W++ R+ TN
Sbjct: 794 K-------DKLSQWVRKRIQPETN 810
>sp|Q6FKT4|CHL1_CANGA ATP-dependent RNA helicase CHL1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CHL1 PE=3 SV=1
Length = 830
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 283/921 (30%), Positives = 451/921 (48%), Gaps = 153/921 (16%)
Query: 16 PYKPYSIQTDFMKALYCSLENG--GVSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQ 73
PY PY IQ D M+ +Y +L N V+++ESPTGTGKTLS+ICS L W+ D K
Sbjct: 10 PYSPYDIQLDLMQCVYDTLANPVKKVAIVESPTGTGKTLSLICSTLTWLRDNKAD----- 64
Query: 74 KYETMIKSDHSFTNNGDCSSNDEPDWMRNFVVNRDFQAEDAKIKKKKNGCGLGKTGERKH 133
++ S + +N D S + EP+W++ D E K + K E H
Sbjct: 65 ----ILSSVDTLHSNEDDSHDSEPEWVK------DTYKESILKDKLELLDEYEKYLEELH 114
Query: 134 -REISTDTFSHSMEKDKCFTKKECENLQSINDQSELSDE-EFLLEEYES--------EEE 183
+E F S+E +++ + + + DE EF+ + YES E++
Sbjct: 115 LKENKIIKFGTSIEDKSKVKRRKVTSSSKAKIEVSIEDEDEFVAKPYESDGEETTDLEKK 174
Query: 184 GAIGGGKSKRKAGAGTISSSSDEEEEDGLDEEGEEVLKVYFCSRTHSQLSQFIKELRKTV 243
A+ + A + ++D E + ++++F SRTHSQL+QF ++L+ T
Sbjct: 175 EALSKEVQELLAKFDSSKKNTDNVELGRFASASQNQVRIFFSSRTHSQLNQFAEQLKLTN 234
Query: 244 FAN---------EIKVVCLGSRKNFCINEEVLRLGNSTHINERCLELQNKKKNEICKIKN 294
F + +K + LGS+K CIN +V + IN+ C E
Sbjct: 235 FPSSFPDKVAHERVKYMPLGSKKQLCINPDVKKWKTLEGINDACSE-------------- 280
Query: 295 LGAEGKVRRTKAFSGCPVLRS------HKLQKGFRNEISQQGALDIEDLVHLGRHMRTCP 348
VRR+K GCP ++ K FR+++ DIED+ +G + CP
Sbjct: 281 ------VRRSK--EGCPFYQNTPKWHNSKETNHFRDQVFSD-IHDIEDIAKVGESLAVCP 331
Query: 349 YYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNLADSLINMYNAKIT 408
YY +R +P++++V LPYQ LLS+S R L L+LK +IV+IDEAHNL D++ ++++A+I+
Sbjct: 332 YYAARDFIPSSEIVTLPYQYLLSESTRSQLRLDLKGSIVVIDEAHNLVDTINSIHSAEIS 391
Query: 409 LSQLENVHSHLEKYFGRFCSLLGPGNRRYIQTLMVFTRAFLQVLLKEKDENDVRQDSENS 468
LS+L+ ++ + Y +F S L PGNR + L + + + + D
Sbjct: 392 LSELKQSYNSIILYMKKFKSRLNPGNRVNLLKLSKLITVLINFITTHYKKPGLEVD---- 447
Query: 469 TGAKHAFDSSVAINEFLFSLNIDNINLVKLLKYIKESNIIHKVSGYGDKAASLQKGSVLK 528
AF L S N D +N+ ++LKYIK S+I +K+ Y K + S K
Sbjct: 448 -----AF-------SILESNNTDMLNVHRVLKYIKTSHIAYKLDTYIQKLQEKESPSNQK 495
Query: 529 DGGENYEEGSILSGFQSLVDMLISLTNNDGDGRIIISKARPISSGQQGQQGGYLKYVMLT 588
+ + L L N +G ++G L+Y++L
Sbjct: 496 PSSQPL--------LYKISKFLECLNNTSSEGSFFF------------ERGPSLRYMLLE 535
Query: 589 GEKVFSEIVEQAHAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVAL 648
++F +I++ A VILAGGT++P+ + + L P L + FSC+H++ P+S L +
Sbjct: 536 PSRIFQDIIDSARCVILAGGTMEPVSQLLQYLVPKLDDSSITKFSCNHVI-PDSHLRTYI 594
Query: 649 SCGPTGKSFDFSYGSRSSSAMIE-ELGLLLCNLVSVVPE--GIIVFFPSFEYVERVYGAW 705
P F+F++ R+S +++ L L + +P+ GII FFPS++Y++ + +W
Sbjct: 595 VNEP---QFEFTFEKRNSVNLVQNHLFNFYLELSTTIPKTGGIIGFFPSYKYLDEIIVSW 651
Query: 706 KSLGILDRIMKKKHVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLN--GAMLLAV 763
+ G+ +++ K++ VF E + D P S N GA+L A+
Sbjct: 652 RKAGLFEKLDKERKVFYEMK----------------DGPDPLPDYTSAVANSEGAILFAI 695
Query: 764 VGGKISEGINFSDGMGRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAY 823
VGGK+SEGINF + R IVM GLPYP+ + EL+ KH+E K LN S
Sbjct: 696 VGGKLSEGINFGGNLCRAIVMTGLPYPNVFSGELIISRKHLE------EKVLNGGGSKT- 748
Query: 824 YNGDAQAGFGILRSCRGRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESS 883
DA KE++EN+CMKAVNQS+GR+IR IND++ I L+D RYA+
Sbjct: 749 ---DANMA----------AKEFFENICMKAVNQSVGRSIRSINDYSLIYLLDKRYAN--- 792
Query: 884 KRSCSHPANKLPRWIKDRLVS 904
++ +KL +W++ R+ S
Sbjct: 793 ----ANIQSKLSQWVRSRIQS 809
>sp|Q2U587|CHL1_ASPOR ATP-dependent RNA helicase chl1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=chl1 PE=3 SV=1
Length = 721
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 254/737 (34%), Positives = 377/737 (51%), Gaps = 132/737 (17%)
Query: 201 SSSSDEEEEDGLDEEGEEVLKVYFCSRTHSQLSQFIKELRKTVFANEI------------ 248
SS+ ++ED G+E +K+ +CSRTHSQL+QF ELR+ + I
Sbjct: 62 SSAHPRQDED----YGDEDIKILYCSRTHSQLTQFASELRRVNMPSSIPKDFSEGVADTD 117
Query: 249 ------KVVCLGSRKNFCINEEVLRLGNSTHINERCLELQNKKKNEICKIKNLGAEGKVR 302
+ + LGSRKN CIN V L N T I+ERCL++Q + AE +
Sbjct: 118 GLQEGVRHLSLGSRKNLCINPRVSSLDNVTAISERCLDMQQP---------GVAAEQR-- 166
Query: 303 RTKAFSGCPVLRSHK-----LQKGFRNEISQQGALDIEDLVHLGRHMRTCPYYGSRSMVP 357
CP L S++ LQ FR+ + DIED+ LG+ + CPYY SRS+
Sbjct: 167 -------CPFLPSNENEAQVLQ--FRDHVLAT-VKDIEDIGKLGKDIGICPYYASRSVTK 216
Query: 358 TADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNLADSLINMYNAKITLSQLENVHS 417
+++V LPY LL +SAR++L L++K ++V+IDEAHNL D++ N+++ ITLS+L+
Sbjct: 217 HSEIVTLPYPLLLQRSARDALDLSIKGHVVVIDEAHNLMDAISNIHSVTITLSELQTSLF 276
Query: 418 HLEKYFGRFCSLLGPGNRRYIQTLMVFTRAFLQVLLKEKDENDVRQDSENSTGAKHAFDS 477
L Y +F + L NR YI ++ + L + + S+ G
Sbjct: 277 QLTTYARKFKTRLKGKNRNYIAQVIRLVTSITDHL------KTILETSQAPEGP------ 324
Query: 478 SVAINEFLFSLNIDNINLVKLLKYIKESNIIHKVSGYGDKAASLQKGSVLKDGGENYEEG 537
V ++ + +D IN KL +Y++ES + KV GY + S ++ D
Sbjct: 325 -VQPSDLMSGKGVDQINPYKLCRYLRESKLARKVDGYSE--FSRERADRQAD---RKPST 378
Query: 538 SILSGFQSLVDMLISLTNNDGDGRIIISKARPISSGQQGQQGGYLKYVMLTGEKVFSEIV 597
+L QS L+ L N +G++ KA Q LKY++L F EIV
Sbjct: 379 PVLFHIQSF---LLPLMNLSAEGKLFYIKA---------QGDIQLKYMLLDPMNQFREIV 426
Query: 598 EQAHAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSF 657
+ A AVILAGGT+ P+ + LFP++ ++ FS H++PPE+++ L G TG F
Sbjct: 427 DDARAVILAGGTMSPMTDYIHHLFPYVPSSRLGTFSYGHVIPPENLIAQVLGKGVTGTEF 486
Query: 658 DFSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSL-------GI 710
DF++ +R S M V+P+G++ FFPS++Y+ +V WK +
Sbjct: 487 DFTFETRDSERM-------------VIPDGVVAFFPSYDYLSQVLSIWKRTLAGEKNRTV 533
Query: 711 LDRIMKKKHVFREPRGNT-HVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKIS 769
D I KK + E R T E +L+EY + S R GA+LL+VVGGK+S
Sbjct: 534 YDLIEGKKTILHESRDVTISTEELLQEYASIVG--SGR---------GALLLSVVGGKLS 582
Query: 770 EGINFSDGMGRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQ 829
EGINFSD +GR +++VGLP+P+ + +I ++E +S SDA A+
Sbjct: 583 EGINFSDRLGRGVLIVGLPFPNIRSAVWQAKIHYVE-----QKAYKESSGSDANRQLVAK 637
Query: 830 AGFGILRSCRGRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSH 889
A GK++YEN CM+AVNQ IGRAIRH ND+AAI+L+D RY + +
Sbjct: 638 AA----------GKDFYENSCMRAVNQCIGRAIRHRNDYAAIVLMDRRYDKPAIQ----- 682
Query: 890 PANKLPRWIKDRLVSST 906
KLP WIK + SS+
Sbjct: 683 --GKLPAWIKQSMASSS 697
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 7 EAEAEFPAFPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLS 53
E +AE PY PY IQ FM+ALY +E G V++ ESPTG LS
Sbjct: 2 EPQAEEFHHPYSPYDIQLQFMRALYSCIEKGKVAVFESPTGKLAGLS 48
>sp|B4PZB4|RTEL1_DROYA Regulator of telomere elongation helicase 1 homolog OS=Drosophila
yakuba GN=GE16425 PE=3 SV=1
Length = 985
Score = 245 bits (625), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 206/747 (27%), Positives = 340/747 (45%), Gaps = 147/747 (19%)
Query: 219 VLKVYFCSRTHSQLSQFIKELRKTVFANEIKVVCLGSRKNFCINEEVLRLGNSTHINERC 278
V KV + SRTHSQL+Q ++EL++T +AN ++ V LGSR CI+ EV+R
Sbjct: 106 VPKVIYASRTHSQLTQAMRELKRTAYAN-MRSVVLGSRDQLCIHPEVMR----------- 153
Query: 279 LELQNKKKNEICKIKNLGAEGKVR-RTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDL 337
E N K +CK++ + R ++ P LR + +DIEDL
Sbjct: 154 -EQGNSNKTNMCKLRVHSKTCSFQMRVESRKDHPDLRGPSI-------------MDIEDL 199
Query: 338 VHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNLA- 396
V +G+ ++ CPY+ SR +VP AD+ +PY LL AR++ + L N IVI+DEAHN+
Sbjct: 200 VKVGQRLKICPYFASRELVPQADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEK 259
Query: 397 ----DSLINMYNAKITLSQLENVHSHLEKYF--GRFCSLLGPGNRRYIQTLMVFTRAFLQ 450
+ + + ++ + ++ +E+V +H+ + F G + G + + + + L
Sbjct: 260 ICEESASVQIKSSDVAMA-IEDV-THIMQVFASGESQDMGGDEPKDFTLDDLTLLKEMLL 317
Query: 451 VLLKEKDENDVRQDSENSTGAKHAFDSSVAINEFLFSLNIDNINLVKLLKYIKESNIIHK 510
K D V E +T F +S+ + E L N N+ ++ +++ K
Sbjct: 318 EFEKAIDAVVVENAVEGTT-----FPASM-MYELLGKANFTYGNVATIV------SLLDK 365
Query: 511 VSGYGDKAASLQKGSVLKDGGENYEEGSILSGFQSLVDMLISLTNNDGDGRIIISKA--- 567
+ Y A+ Q+ ++ K G F L D+L + N D ++SK
Sbjct: 366 LVQYLLVAS--QQMTIRKGGT-----------FTMLSDLLTIVFANKED---VMSKVYAS 409
Query: 568 -------RPISSG---QQG--QQGGYL---KYVMLTGEKVFSEIVE-------------- 598
+ G QQG Q GG+L TG ++I+
Sbjct: 410 FKVHVQLEEVKQGHGKQQGGKQHGGWLGKGTIAAATGSIKVAKIINFWCFNPGFGMEQLL 469
Query: 599 --QAHAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKS 656
Q +VIL GTL P++ L L+ HIV + + GP +
Sbjct: 470 NTQVRSVILTSGTLAPLKP----LIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDRQQ 525
Query: 657 FDFSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMK 716
+Y +R + I LG + N+ +VP+G++VFFPS+ + + AW++ G+ I
Sbjct: 526 LISNYANRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNKCVDAWQASGLWADISV 585
Query: 717 KKHVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSD 776
KK +F EPR S ++E+ + I DS GA+ +AV GK+SEG++F+D
Sbjct: 586 KKPIFLEPRSKDQFTSTMEEFYQAI--------RDS---KGAVFMAVCRGKVSEGLDFAD 634
Query: 777 GMGRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILR 836
GR +++ GLP+P + +++ + +++E ++ L+
Sbjct: 635 RNGRAVIITGLPFPPLKDPKVILKRRYLEANRTRENQLLS-------------------- 674
Query: 837 SCRGRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPR 896
G+E+Y +AVNQ+IGR IRH ND+ AILL D R+ S +L +
Sbjct: 675 -----GQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQ-------VQQLSK 722
Query: 897 WIKDRL--VSSTNNYGEVHRLLHQFFK 921
WI+ L + +G + R L QFFK
Sbjct: 723 WIRGHLGDRPQCSPFGPIVRELRQFFK 749
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 15 FPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWV-VDQKQKQKQKQ 73
FP++PY +Q +M+ + L +G +LESPTGTGKTLS++CS+L W+ Q + Q+Q
Sbjct: 13 FPFEPYPVQRAYMEKVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQQQMV 72
Query: 74 KYE 76
K E
Sbjct: 73 KME 75
>sp|B3MSG8|RTEL1_DROAN Regulator of telomere elongation helicase 1 homolog OS=Drosophila
ananassae GN=GF20802 PE=3 SV=1
Length = 994
Score = 241 bits (615), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 209/744 (28%), Positives = 339/744 (45%), Gaps = 141/744 (18%)
Query: 219 VLKVYFCSRTHSQLSQFIKELRKTVFANEIKVVCLGSRKNFCINEEVLR-LGNSTHINER 277
V KV + SRTHSQL+Q ++EL++T ++N ++ V LGSR CI+ EV R +GNS +N
Sbjct: 106 VPKVIYASRTHSQLTQAMRELKRTAYSN-MRSVVLGSRDQLCIHPEVSREVGNSNKVN-- 162
Query: 278 CLELQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDL 337
+CK++ +K + + S K FR +DIEDL
Sbjct: 163 -----------MCKLR--------VHSKTCTFQLRVESKKDHPDFRGP----SIMDIEDL 199
Query: 338 VHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNLA- 396
+ +G+ ++ CPYY S+ +VP AD+ +PY LL AR++ + L N IVI+DEAHN+
Sbjct: 200 IKVGQKLKMCPYYASKELVPQADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEK 259
Query: 397 ----DSLINMYNAKITLSQLENVHSHLEKYFGRFCSLLGPGNRR---YIQTLMVFTRAFL 449
+ + + ++ + ++ +E+V +H+ K F G+ I LM+ L
Sbjct: 260 ICEESASVQIKSSDVAIA-IEDV-THIMKAFASDSPQDMAGDEPKDFTIDDLMLLKEMLL 317
Query: 450 QVLLKEKDENDVRQDSENSTGAKHAFDSSVAINEFLFSLNIDNINLVKLLKYIKESNIIH 509
+ EK + V D+ GA + + I E L N N+ ++ ++
Sbjct: 318 DL---EKAIDAVAVDNP-IDGATYP---ASMIYELLGKANFTYGNVATIVA------LLD 364
Query: 510 KVSGYGDKAASLQKGSVLKDGGENYEEGSILSGFQSLVDMLISLTNNDGD--GRIIISKA 567
K+ Y AS Q+ S+ K G F L D+L + N G++ S
Sbjct: 365 KLVQYL-MVASQQQMSLRKGGS-----------FTLLSDLLTIVFANKESVMGKVHASFK 412
Query: 568 RPI----SSGQQGQQ------GGYLKYVMLTGEKV--FSEIVE----------------Q 599
+ S QG+Q GG+L LT ++I+ Q
Sbjct: 413 VHVQVEESKQPQGKQAPAKQAGGWLSKASLTNGSTGKVAKIINFWCFNPGFGMEQLLNTQ 472
Query: 600 AHAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFDF 659
+VIL GTL P++ L L+ HIV + + GP +
Sbjct: 473 VRSVILTSGTLAPLKP----LIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDRQPLIS 528
Query: 660 SYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKKH 719
+Y +R + I LG + N+ +VP+G++VFFPS+ + + AW++ G+ I KK
Sbjct: 529 NYTNRDNPKYISSLGQTILNVSRLVPDGLLVFFPSYPMLNKCVDAWQASGLWADIASKKP 588
Query: 720 VFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGMG 779
+F EPRG S ++E+ + I DS GA +AV GK+SEG++F+D G
Sbjct: 589 IFLEPRGKDQFTSTMEEFYQAI--------RDS---KGACFMAVCRGKVSEGLDFADRNG 637
Query: 780 RCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSCR 839
R +++ GLP+P + +++ + +++E ++ L+
Sbjct: 638 RAVIITGLPFPPLKDPKVILKRRYLESNRTRENQLLS----------------------- 674
Query: 840 GRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWIK 899
G E+Y +AVNQ+IGR IRH ND+ AILL D R+ + +L +WI+
Sbjct: 675 --GNEWYNLEATRAVNQAIGRVIRHRNDYGAILLCDSRFKDAAQ-------VQQLSKWIR 725
Query: 900 DRL--VSSTNNYGEVHRLLHQFFK 921
L + +G + R L QFFK
Sbjct: 726 GHLGDRPQCSPFGPIVRELRQFFK 749
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 5/68 (7%)
Query: 15 FPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQK 74
FP++PY +Q +M+ + L++G +LESPTGTGKTLS++CS+L W+ + +Q +
Sbjct: 13 FPFEPYPVQRAYMEKVIQCLKDGTNGVLESPTGTGKTLSLLCSSLAWI-----RTRQSEH 67
Query: 75 YETMIKSD 82
+ MIK D
Sbjct: 68 QQQMIKLD 75
>sp|Q5SXJ3|FANCJ_MOUSE Fanconi anemia group J protein homolog OS=Mus musculus GN=Brip1
PE=2 SV=1
Length = 1174
Score = 231 bits (588), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 239/961 (24%), Positives = 409/961 (42%), Gaps = 179/961 (18%)
Query: 15 FPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQW-------VVDQKQ 67
FP + Y Q M ++ L + +LESPTG+GK+L+++CSAL W VD+
Sbjct: 17 FPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAWQQSLSEKPVDEGL 76
Query: 68 KQKQKQK--------YETMIKSDHSFTNNGDCSSNDEPDWMRNFVVNRDFQAEDAKIKKK 119
+K + + SD + + +S +P RN V +D+ K
Sbjct: 77 NKKPEAPPSCSCACHSKNFTYSDTNLDTSPHFNSPSKPSSGRNGVST---PCQDSPEKNT 133
Query: 120 KNGCGLGKTGERKHREISTDTFSHSMEKDKCFTKKECENLQSINDQSELSDEEF-----L 174
K HR+ D +EK + + E Q I + L + L
Sbjct: 134 LAAKLSAKKQASIHRDEDDD---FQVEKKRI---RPLETTQQIRKRHCLEKDVHHVDARL 187
Query: 175 LEEYESEEEGAIGGGKSKRK---AGAGTISSSSDEEEEDGLDEEGEEVLK---------- 221
E + E IG S RK + S + G ++E +K
Sbjct: 188 ASEKRVKPESPIGKSFSDRKDSFQNVDGLCSRCCCSAKQGNNQEPANTVKKDHGGQCKRP 247
Query: 222 -VYFCSRTHSQLSQFIKELRKTVFANEIKVVCLGSRKNFCINEEVLRLGNSTHINERCLE 280
+YF +RTH Q++Q +ELRKT ++ + + L SR + C++ EV +GN E+C+E
Sbjct: 248 KIYFGTRTHKQIAQITRELRKTAYSG-VPMTILSSRDHSCVHPEV--VGNFNR-KEKCME 303
Query: 281 LQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKL--QKGFRNEISQQGALDIEDLV 338
L + K + C + G HK+ Q+ ++ A DIE+LV
Sbjct: 304 LLDGKHGKSCYF--------------YHGV-----HKISNQQTLQHLQGMSRAWDIEELV 344
Query: 339 HLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNLADS 398
LGR ++ CPYY +R ++ AD+V PY LL RE++ + LK +VI+DEAHN+ D
Sbjct: 345 SLGRKLKACPYYTARELIEDADIVFCPYNYLLDSQIRETMDIKLKGQVVILDEAHNIEDC 404
Query: 399 LINMYNAKITLSQLENVHSHLEKYFGRFCSLLGPGNRRYIQTLMVFTRAFLQVLLKEKDE 458
+ +T QL L+ SL+ GN +++K
Sbjct: 405 ARESASYSVTEVQLRFARDELD-------SLIN-GN------------------IRKKSH 438
Query: 459 NDVRQDSEN-----STGAKH----AFDSSVAI---NEFLFSL---NIDNINLVKLLKYIK 503
+R N T +KH ++SS I NE L +L I L +++
Sbjct: 439 EPLRDVCYNLINWLETNSKHLVERGYESSCKIWSGNEMLLNLYRMGITTATFPVLQRHL- 497
Query: 504 ESNIIH---KVSGYGDKAASLQ------------KGSVLKDGGENYEEGSILSGFQSLVD 548
S ++ KV+ K ++Q KG + E ++ +
Sbjct: 498 -SAVLQKEEKVTPIHGKEEAIQIPIISASTQVVLKGLFMVLDYLFRENSRFADDYKVAIQ 556
Query: 549 MLISLTNN----DGDGRIIISKARPISSGQQGQQGGYLKYVMLTGEKVFSEIVEQAHAVI 604
S TN D G + + K + S + G L + L FS+I ++ ++
Sbjct: 557 QTYSWTNQIAIFDKTGVLAVPKNKKHSRQKIGVNA--LNFWCLNPAVAFSDINDKVRTIV 614
Query: 605 LAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFDFSYGSR 664
L GTL P++ L S +H++ + + GP G++ ++
Sbjct: 615 LTSGTLSPLKSFSSELGVTFSIQ----LEANHVISNSQVWVGTVGSGPKGRNLCATFQHT 670
Query: 665 SSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKKHVFREP 724
+ +E+G+LL ++ V +GI+ F PS++ +E++ W G+ + K V EP
Sbjct: 671 ETFEFQDEVGMLLLSVCQTVSQGILCFLPSYKLLEKLRERWIFTGLWHSLESVKTVIAEP 730
Query: 725 RG--NTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGMGRCI 782
+G T + +L+ Y D + + ++D GA+L+AV GK+SEG++FSD R +
Sbjct: 731 QGGEKTDFDELLQVY---YDAIKFKGEKD-----GALLIAVCRGKVSEGLDFSDDNARAV 782
Query: 783 VMVGLPYPSPSNIEL-LERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSCRGR 841
+ VG+P+P+ ++++ L+R YN G+L
Sbjct: 783 ITVGIPFPNVKDLQVELKR----------------------QYNDHHSKSRGLL-----P 815
Query: 842 GKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWIKDR 901
G+++YE +A+NQ++GR IRH ND A++LVD R+ + ++ + L +W++ +
Sbjct: 816 GRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFNNNPNRY-----ISGLSKWVRQQ 870
Query: 902 L 902
+
Sbjct: 871 I 871
>sp|Q7QEI1|RTEL1_ANOGA Regulator of telomere elongation helicase 1 homolog OS=Anopheles
gambiae GN=AGAP000634 PE=3 SV=5
Length = 991
Score = 219 bits (559), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 194/759 (25%), Positives = 337/759 (44%), Gaps = 141/759 (18%)
Query: 205 DEEEEDGLDEEGEEV-LKVYFCSRTHSQLSQFIKELRKTVFANEIKVVCLGSRKNFCINE 263
D E+ L ++ +K+ + SRTHSQLSQ ++EL+ T + ++ + LGSR CI+
Sbjct: 93 DPEQALALQQQKANAKMKIIYASRTHSQLSQAMQELKNTSYLF-VRSIILGSRDQLCIHP 151
Query: 264 EVLRLGNSTHINERCLELQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFR 323
++ + N+ C E K +N +V K R
Sbjct: 152 DISKQENNAIKTVLC--------RESVKARNCSFYNRVETAKD----------------R 187
Query: 324 NEISQQGALDIEDLVHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLK 383
+++ +DIEDLV +GR ++ CPYY S+ +V AD++ +PY LL AR+S GL+L+
Sbjct: 188 PDVATVPVMDIEDLVTVGRKLKACPYYLSKELVEQADVIFMPYNYLLDPKARKSNGLSLQ 247
Query: 384 NNIVIIDEAHNLADSLINMYNAKITLSQL----ENVHSHLEKYFGRFCSLLGPGNRRYIQ 439
N ++I+DEAHN+ + +A + S + E+ S ++ + G G ++
Sbjct: 248 NTVIILDEAHNVEKMCEEVGSALLRSSDIALAIEDTSSVIKSMMDGGGAWTGDGEKQLEL 307
Query: 440 TL--MVFTRAFLQVLLKEKDENDVRQDSENST-GAKHAFDSSVAINEFLFSLNIDNINLV 496
TL +V + L + K D+ + +T + FD N + NIN+V
Sbjct: 308 TLDDLVLLKEILLGVEKAVDDIPILFSQGGTTHPGTYIFDLLEKAN-----IKFGNINVV 362
Query: 497 KLLKYIKESNIIHKVSGYGDKAASLQKGSVLKDGGENYEEGSILSGFQSLVDMLISLTNN 556
+ S I H + + G ++ G +G QS+VD L + +
Sbjct: 363 L---QVMNSLITH--------ITTEKTGGFVRRG----------AGLQSMVDFLEVVFAS 401
Query: 557 DGDG---------RIIISKARP--ISSGQQGQQGGY------LKYVMLTGEKVFS----- 594
G R+ I P ++ G + G+ LK + + KV +
Sbjct: 402 SGPEYRQAVEKCFRVHIEPEEPKQLAKGGVKRADGWTATKQPLKAPVKSTSKVINFWCFN 461
Query: 595 ------EIVEQ-AHAVILAGGTLQPIEETRERLFPWLSPNKFHF---FSCSHIVPPESIL 644
++V+ ++IL GTL P++ P++S HI+ +
Sbjct: 462 PGFGMRQLVDSGTRSIILTSGTLAPLK-------PFISELSLPVAVSLENPHIIARSQVY 514
Query: 645 PVALSCGPTGKSFDFSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGA 704
++ GP + S+ +RS+ I LG +L ++P G+++FFPS+ + +
Sbjct: 515 VKVITHGPDRVELNSSFKNRSNPEYIASLGRTALSLCPIIPGGLLIFFPSYPLLNKCSEE 574
Query: 705 WKSLGILDRIMKKKHVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVV 764
W++ GI +I + K +F EPRG + + EY + +SR GA+ +AV
Sbjct: 575 WQASGIWGQISRLKQIFVEPRGKDQFTTTMAEYYAQVRDPASR---------GAIFMAVC 625
Query: 765 GGKISEGINFSDGMGRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYY 824
GK+SEG++F+D GR +++ GLP+P + ++ + +++ DTN N +
Sbjct: 626 RGKVSEGLDFADANGRAVMITGLPFPPMMDARVVLKKQYL----DTNRTRENELIT---- 677
Query: 825 NGDAQAGFGILRSCRGRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSK 884
G ++Y +AVNQ+IGR IRH +D+ AILL D R+ + +
Sbjct: 678 -----------------GNDWYSLEASRAVNQAIGRVIRHKDDYGAILLCDSRFQNARQQ 720
Query: 885 RSCSHPANKLPRWIKDRL--VSSTNNYGEVHRLLHQFFK 921
+L WI L S+ N+G V + +FF+
Sbjct: 721 -------AQLSAWIHSHLRESSAVPNFGTVVGEMSRFFR 752
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 15 FPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQK 74
FP++PY +Q ++M + L+N +LESPTGTGKTLS++CS++ W++ K KQ K +
Sbjct: 13 FPFEPYELQKNYMAKVIECLQNKTNGVLESPTGTGKTLSLLCSSMAWLLHMKSKQP-KHR 71
Query: 75 YETM 78
ET+
Sbjct: 72 METI 75
>sp|Q55G81|ERCC2_DICDI TFIIH basal transcription factor complex helicase repD subunit
OS=Dictyostelium discoideum GN=repD PE=2 SV=1
Length = 776
Score = 164 bits (414), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 176/707 (24%), Positives = 294/707 (41%), Gaps = 110/707 (15%)
Query: 220 LKVYFCSRTHSQLSQFIKELRKTV-FANE------IKVVCLG--SRKNFCINEEVLRLGN 270
+K+ +CSRT ++ Q +E R+ + + N K +C+ SR+N CI V +
Sbjct: 66 IKLIYCSRTVPEIEQATEEARRVLQYRNSEMGEESPKTLCMSMSSRRNLCIQPRVSEERD 125
Query: 271 STHINERCLEL-----QNKKKNEICKI-KNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRN 324
++ C EL + +E CK +N + GK
Sbjct: 126 GKVVDALCRELTSSWNRESPTSEKCKFFENFESNGK------------------------ 161
Query: 325 EISQQGALDIEDLVHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNL-K 383
EI +G +EDL G + CPY+ SR M+ A++V+ YQ LL + +
Sbjct: 162 EILLEGVYSLEDLKEYGLKHQMCPYFLSRHMLNFANIVIFSYQYLLDPKIASLISSSFPS 221
Query: 384 NNIVIIDEAHNLADSLINMYNAKITLSQLENVHSHLEKYFGRFCSLLGPGNRRYIQTLMV 443
N+IV+ DEAHN+ + IN + I L+ ++ K + + +R
Sbjct: 222 NSIVVFDEAHNIDNVCINALSINIDNKLLDTSSKNIAKINKQIEDIKKVDEKRLKDEYQR 281
Query: 444 FTRAFLQVLLKEKDE--------NDVRQDSE--NSTGAKHAFDSSVAINEFLFSLNIDNI 493
+ DE NDV Q++ N A+H + ++L S +
Sbjct: 282 LVNGLARSGSTRADETTSDPVLPNDVIQEAVPGNIRKAEHFISLLRRVVDYLKSRLKSQM 341
Query: 494 NLVK-LLKYIKESNIIHKVSGYGDKAASLQKGSVLKDGGENYEEGSILSGFQSLVDMLIS 552
L + L +++ ++S + S + S+L+ N + + SG SL+ +
Sbjct: 342 LLSESPLAFLQGLYHATQISSRTLRFCSSRLSSLLRTLRIN--DVNQFSGI-SLIADFAT 398
Query: 553 LTNNDGDGRIIISKARPISSGQQGQQGGYLKYVMLTGEKVFSEIVEQAHAVILAGGTLQP 612
L +G +II P Q ++ L I ++ +V++ GTL P
Sbjct: 399 LVGTYNNGFLII--IEPYYQRQNNTYDQIFQFCCLDASIGMKPIFDKYRSVVITSGTLSP 456
Query: 613 IEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFDFSYGSRSSSAMIEE 672
++ + L P + S + I P L+ G S + RS +A++
Sbjct: 457 LDIYTKML--NFRPTVVERLTMS--LNRNCICPCILTRGSDQISISTKFDVRSDTAVVRN 512
Query: 673 LGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKKHVFREPRGNTHVES 732
G LL + ++VP+GII FF S+ Y+E++ W +G+L+ I+ K +F E
Sbjct: 513 YGALLVEVSAIVPDGIICFFTSYSYMEQIVSVWNEMGLLNNILTNKLIFVETSDPAESAL 572
Query: 733 VLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGMGRCIVMVGLPYPSP 792
L+ Y+K D S R GA+LL+V GK+SEGI+F + GRC+++ G+PY
Sbjct: 573 ALQNYKKACD--SGR---------GAVLLSVARGKVSEGIDFDNQYGRCVILYGIPYI-- 619
Query: 793 SNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRS-CRGRGKEYYENLCM 851
+T SK L +A LR + R E+ M
Sbjct: 620 ----------------NTESKVL-------------RARLEFLRDRYQIRENEFLTFDAM 650
Query: 852 KAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWI 898
+ +Q +GR IR +D+ ++ D RY + KR NKLP+WI
Sbjct: 651 RTASQCVGRVIRGKSDYGIMIFADKRY-NRLDKR------NKLPQWI 690
Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 15 FPYK-PYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSII 55
FPY Y Q +M AL SL+NGG +LE P+GTGKT+S++
Sbjct: 12 FPYSYIYPEQYSYMVALKRSLDNGGPCILEMPSGTGKTVSLL 53
>sp|P26659|RAD15_SCHPO DNA repair helicase rad15 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rad15 PE=1 SV=2
Length = 772
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 163/726 (22%), Positives = 287/726 (39%), Gaps = 125/726 (17%)
Query: 221 KVYFCSRTHSQLSQFIKELRKTV--------FANEIKVVCLGSRKNFCINEEVLRLGNST 272
K+ +CSRT S++ + + EL++ + + + L SRKN C++ V R N
Sbjct: 68 KLIYCSRTMSEIDKALAELKRLMAYRTSQLGYEEPFLGLGLTSRKNLCLHPSVRREKNGN 127
Query: 273 HINERCLELQNKKKNEICKIKNLGAEGKVRRTK-AFSGCPVLRSH-KLQKGFRNEISQQG 330
++ RC L G VR + A P H L+ + + G
Sbjct: 128 VVDARCRSL---------------TAGFVREQRLAGMDVPTCEFHDNLEDLEPHSLISNG 172
Query: 331 ALDIEDLVHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNL-KNNIVII 389
++D+ G CPY+ R M+P ++++ Y LL E + L K+ IV+
Sbjct: 173 VWTLDDITEYGEKTTRCPYFTVRRMLPFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVF 232
Query: 390 DEAHNLADSLINMYNAKITLSQLENVHS------------------HLEKYFGRFCSLLG 431
DEAHN+ + I + +T S L L+ + + L
Sbjct: 233 DEAHNIDNVCIESLSIDLTESSLRKASKSILSLEQKVNEVKQSDSKKLQDEYQKLVRGLQ 292
Query: 432 PGNRRYIQTLMVFTRAFLQVLLKEKDENDVRQDSENSTGAKHAFDSSVAINEFLFS---- 487
N + + + +LKE ++R+ A+H E+L +
Sbjct: 293 DANAANDEDQFMANPVLPEDVLKEAVPGNIRR-------AEHFIAFLKRFVEYLKTRMKV 345
Query: 488 LNIDNINLVKLLKYIKESNIIHK--VSGYGDKAASLQKGSVLKDGGENYEEGSILSGFQS 545
L++ L+++K+ I K + ++ SL + + S++ F S
Sbjct: 346 LHVIAETPTSFLQHVKDITFIDKKPLRFCAERLTSLVRAL----------QISLVEDFHS 395
Query: 546 L--VDMLISLTNNDGDGRIIISKARPISSGQQGQQGGYLKYVMLTGEKVFSEIVEQAHAV 603
L V +L G I+I + P + L++ L + E+ +V
Sbjct: 396 LQQVVAFATLVATYERGFILILE--PFETENATVPNPILRFSCLDASIAIKPVFERFRSV 453
Query: 604 ILAGGTLQPIEETRERLFP-WLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFDFSYG 662
I+ GTL P++ ++P L N S + LP+ ++ G + +
Sbjct: 454 IITSGTLSPLD-----MYPKMLQFNTVMQESYGMSLARNCFLPMVVTRGSDQVAISSKFE 508
Query: 663 SRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKKHVFR 722
+R+ +++ G +L + P+G++ FFPS+ Y+E + +W+S+GILD + K K +
Sbjct: 509 ARNDPSVVRNYGNILVEFSKITPDGLVAFFPSYLYLESIVSSWQSMGILDEVWKYKLILV 568
Query: 723 EPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGMGRCI 782
E L+ Y+ GA+LL+V GK+SEG++F GR +
Sbjct: 569 ETPDPHETTLALETYRAACSN-----------GRGAVLLSVARGKVSEGVDFDHHYGRAV 617
Query: 783 VMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSCRGRG 842
+M G+PY + L R +E L DT + R
Sbjct: 618 IMFGIPYQYTESRVLKAR---LEFLRDTY---------------------------QIRE 647
Query: 843 KEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWIKDRL 902
++ M+ Q +GR +R +DH ++L D RY S KR+ KLP+WI+ +
Sbjct: 648 ADFLTFDAMRHAAQCLGRVLRGKDDHGIMVLADKRYG-RSDKRT------KLPKWIQQYI 700
Query: 903 VSSTNN 908
N
Sbjct: 701 TEGATN 706
Score = 42.7 bits (99), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 15 FPY-KPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQ 73
FPY + Y Q +M L SL+ GG+++LE P+GTGKT+S+ L +V +Q + +
Sbjct: 12 FPYPRIYPEQYQYMCDLKHSLDAGGIALLEMPSGTGKTISL----LSLIVSYQQHYPEHR 67
Query: 74 K 74
K
Sbjct: 68 K 68
>sp|B4GU19|RTEL1_DROPE Regulator of telomere elongation helicase 1 homolog OS=Drosophila
persimilis GN=GL14463 PE=3 SV=1
Length = 1009
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 159/325 (48%), Gaps = 49/325 (15%)
Query: 599 QAHAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFD 658
Q +VIL GTL P++ L L+ HIV + + GP +
Sbjct: 473 QVRSVILTSGTLAPLKP----LIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDRQQLI 528
Query: 659 FSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKK 718
++ +R + I LG + N+ +VP+G++VFFPS+ + + AW++ G+ I KK
Sbjct: 529 SNFKNRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDAWQASGLWADISCKK 588
Query: 719 HVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGM 778
+F EPRG S ++E+ + I DS GA+ +AV GK+SEG++F+D
Sbjct: 589 PIFVEPRGKDQFTSTMEEFYQAI--------RDS---KGAVFMAVCRGKVSEGLDFADRN 637
Query: 779 GRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSC 838
GR +++ GLP+P + +++ + +++E TN N S
Sbjct: 638 GRAVIITGLPFPPLKDPKVILKRRYLE----TNRTKENQLLS------------------ 675
Query: 839 RGRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWI 898
G+E+Y +AVNQ+IGR IRH ND+ AILL D R+ S +L +WI
Sbjct: 676 ---GQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFQDASQ-------VQQLSKWI 725
Query: 899 KDRLVS--STNNYGEVHRLLHQFFK 921
+ L + ++ +G + R L QFFK
Sbjct: 726 RGHLGARPQSSPFGPIVRELRQFFK 750
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 100/178 (56%), Gaps = 27/178 (15%)
Query: 219 VLKVYFCSRTHSQLSQFIKELRKTVFANEIKVVCLGSRKNFCINEEVLR-LGNSTHINER 277
V KV + SRTHSQL+Q ++EL++T +AN ++ V LGSR CI+ EV++ GNS +N
Sbjct: 106 VPKVIYASRTHSQLNQAMRELKRTAYAN-MRSVVLGSRDQLCIHPEVMKEQGNSNKVN-- 162
Query: 278 CLELQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDL 337
+CK++ +K + + S K FR +DIEDL
Sbjct: 163 -----------LCKLR--------VHSKTCTFQLRVESKKDHPDFRGP----SIMDIEDL 199
Query: 338 VHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNL 395
V +G+ ++ CPYY S+ +V AD+ +PY LL AR++ + L N I+I+DEAHN+
Sbjct: 200 VRVGQKLKMCPYYASKELVAQADITFMPYNYLLDPKARKANKIELGNTIIILDEAHNI 257
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 5/66 (7%)
Query: 15 FPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQK 74
FP++PY++Q D+M+ + L +G +LESPTGTGKTLS++C++L W+ + +Q +
Sbjct: 13 FPFEPYNVQRDYMEKVIICLRDGTNGVLESPTGTGKTLSLLCASLAWI-----RTRQSEH 67
Query: 75 YETMIK 80
+ MIK
Sbjct: 68 QQQMIK 73
>sp|Q29FS3|RTEL1_DROPS Regulator of telomere elongation helicase 1 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=GA17940 PE=3 SV=2
Length = 1009
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 159/325 (48%), Gaps = 49/325 (15%)
Query: 599 QAHAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFD 658
Q +VIL GTL P++ L L+ HIV + + GP +
Sbjct: 473 QVRSVILTSGTLAPLKP----LIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDRQQLI 528
Query: 659 FSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKK 718
++ +R + I LG + N+ +VP+G++VFFPS+ + + AW++ G+ I KK
Sbjct: 529 SNFKNRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDAWQASGLWADISCKK 588
Query: 719 HVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGM 778
+F EPRG S ++E+ + I DS GA+ +AV GK+SEG++F+D
Sbjct: 589 PIFVEPRGKDQFTSTMEEFYQAI--------RDS---KGAVFMAVCRGKVSEGLDFADRN 637
Query: 779 GRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSC 838
GR +++ GLP+P + +++ + +++E TN N S
Sbjct: 638 GRAVIITGLPFPPLKDPKVILKRRYLE----TNRTKENQLLS------------------ 675
Query: 839 RGRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWI 898
G+E+Y +AVNQ+IGR IRH ND+ AILL D R+ S +L +WI
Sbjct: 676 ---GQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFQDASQ-------VQQLSKWI 725
Query: 899 KDRLVS--STNNYGEVHRLLHQFFK 921
+ L + ++ +G + R L QFFK
Sbjct: 726 RGHLGARPQSSPFGPIVRELRQFFK 750
Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 100/178 (56%), Gaps = 27/178 (15%)
Query: 219 VLKVYFCSRTHSQLSQFIKELRKTVFANEIKVVCLGSRKNFCINEEVLR-LGNSTHINER 277
V KV + SRTHSQL+Q ++EL++T +AN ++ V LGSR CI+ EV++ GNS +N
Sbjct: 106 VPKVIYASRTHSQLNQAMRELKRTAYAN-MRSVVLGSRDQLCIHPEVMKEQGNSNKVN-- 162
Query: 278 CLELQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDL 337
+CK++ +K + + S K FR +DIEDL
Sbjct: 163 -----------LCKLR--------VHSKTCTFQLRVESKKDHPDFRGP----SIMDIEDL 199
Query: 338 VHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNL 395
V +G+ ++ CPYY S+ +V AD+ +PY LL AR++ + L N I+I+DEAHN+
Sbjct: 200 VRVGQKLKMCPYYASKELVAQADITFMPYNYLLDPKARKANKIELGNTIIILDEAHNI 257
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 5/66 (7%)
Query: 15 FPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQK 74
FP++PY++Q D+M+ + L +G +LESPTGTGKTLS++C++L W+ + +Q +
Sbjct: 13 FPFEPYNVQRDYMEKVIICLRDGTNGVLESPTGTGKTLSLLCASLAWI-----RTRQSEH 67
Query: 75 YETMIK 80
+ MIK
Sbjct: 68 QQQMIK 73
>sp|B4I0K4|RTEL1_DROSE Regulator of telomere elongation helicase 1 homolog OS=Drosophila
sechellia GN=GM12432 PE=3 SV=1
Length = 966
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 171/371 (46%), Gaps = 70/371 (18%)
Query: 574 QQG--QQGGYL---KYVMLTGEKVFSEIVE----------------QAHAVILAGGTLQP 612
QQG QQGG+L TG ++I+ Q +VIL GTL P
Sbjct: 407 QQGAKQQGGWLGKGTIAAATGSSKVAKIINFWCFNPGFGMEQLLNTQVRSVILTSGTLAP 466
Query: 613 IEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFDFSYGSRSSSAMIEE 672
++ L L+ HIV + + GP + +Y +R + +
Sbjct: 467 LKP----LIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDRQQLISNYANRDNPKYVSS 522
Query: 673 LGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKKHVFREPRGNTHVES 732
LG + N+ +VP+G++VFFPS+ + + AW++ G+ I KK +F EPR S
Sbjct: 523 LGQTILNVARIVPDGLLVFFPSYPMLNKCVDAWQASGLWADISCKKPIFLEPRSKDQFTS 582
Query: 733 VLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGMGRCIVMVGLPYPSP 792
++E+ + I DS GA+ +AV GK+SEG++F+D GR +++ GLP+P
Sbjct: 583 TMEEFYQAI--------RDS---KGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPL 631
Query: 793 SNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSCRGRGKEYYENLCMK 852
+ +++ + +++E ++ L+ G+E+Y +
Sbjct: 632 KDPKVILKRRYLEANRTRENQLLS-------------------------GQEWYNLDATR 666
Query: 853 AVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWIKDRL--VSSTNNYG 910
AVNQ+IGR IRH ND+ AILL D R+ S +L +WI+ L + +G
Sbjct: 667 AVNQAIGRVIRHRNDYGAILLCDSRFKDASQ-------VQQLSKWIRGHLGDRPQCSPFG 719
Query: 911 EVHRLLHQFFK 921
+ R L QFFK
Sbjct: 720 PIVRELRQFFK 730
Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 90/178 (50%), Gaps = 46/178 (25%)
Query: 219 VLKVYFCSRTHSQLSQFIKELRKTVFANEIKVVCLGSRKNFCINEEVLRLGNSTHINERC 278
V KV + SRTHSQL+Q ++EL++T +AN ++ V LGSR CI+ EV+R
Sbjct: 106 VPKVIYASRTHSQLTQAMRELKRTAYAN-MRSVVLGSRDQLCIHPEVMR----------- 153
Query: 279 LELQNKKKNEICKIKNLGAEGKVR-RTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDL 337
EL N K +CK++ + R ++ P LR + +DIEDL
Sbjct: 154 -ELGNSNKTNMCKLRVHSKTCSFQMRVESRKDHPDLRGPTI-------------MDIEDL 199
Query: 338 VHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNL 395
V +G+ ++ CPY+ SR L+++ + LG N IVI+DEAHN+
Sbjct: 200 VKVGQRLKICPYFASRE---------------LARANKIELG----NTIVILDEAHNI 238
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 15 FPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWV-VDQKQKQKQKQ 73
FP++PY +Q +M+ + L +G +LESPTGTGKTLS++CS+L W+ Q + Q Q
Sbjct: 13 FPFEPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQMQMV 72
Query: 74 KYETMIKSDHS 84
K E K+D S
Sbjct: 73 KME---KADFS 80
>sp|Q9W484|RTEL1_DROME Regulator of telomere elongation helicase 1 homolog OS=Drosophila
melanogaster GN=CG4078 PE=1 SV=1
Length = 985
Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 177/383 (46%), Gaps = 70/383 (18%)
Query: 562 IIISKARPISSGQQG--QQGGYL---KYVMLTGEKVFSEIVE----------------QA 600
+++ +++ QQG QQGG+L TG ++I+ Q
Sbjct: 414 VLVEESKQGHGKQQGAKQQGGWLGKGTIAAATGLSKVAKIINFWCFNPGFGMEQLLNTQV 473
Query: 601 HAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFDFS 660
+VIL GTL P++ L L+ HIV + + GP + +
Sbjct: 474 RSVILTSGTLAPLKP----LIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDRQQLISN 529
Query: 661 YGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKKHV 720
Y +R + I LG + N+ +VP+G++VFFPS+ + + AW++ G+ I KK +
Sbjct: 530 YANRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDAWQASGLWADISCKKPI 589
Query: 721 FREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGMGR 780
F EPR S ++E+ + I DS GA+ +AV GK+SEG++F+D GR
Sbjct: 590 FLEPRSKDQFTSTMEEFYQAI--------RDS---KGAVFMAVCRGKVSEGLDFADRNGR 638
Query: 781 CIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSCRG 840
+++ GLP+P + +++ + +++E ++ L+
Sbjct: 639 AVIITGLPFPPLKDPKVILKRRYLEANRTRENQLLS------------------------ 674
Query: 841 RGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWIKD 900
G+E+Y +AVNQ+IGR IRH ND+ AILL D R+ S +L +WI+
Sbjct: 675 -GQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQ-------VQQLSKWIRG 726
Query: 901 RL--VSSTNNYGEVHRLLHQFFK 921
L + +G + R L QFFK
Sbjct: 727 HLGDRPQCSPFGPIVRELRQFFK 749
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 99/178 (55%), Gaps = 27/178 (15%)
Query: 219 VLKVYFCSRTHSQLSQFIKELRKTVFANEIKVVCLGSRKNFCINEEVLRLGNSTHINERC 278
V KV + SRTHSQL+Q ++EL++T +AN ++ V LGSR CI+ EV+R
Sbjct: 106 VPKVIYASRTHSQLTQAMRELKRTAYAN-MRSVVLGSRDQLCIHPEVMR----------- 153
Query: 279 LELQNKKKNEICKIKNLGAEGKVR-RTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDL 337
E N K +CK++ + R ++ P LR + +DIEDL
Sbjct: 154 -EQGNSNKTNMCKLRVHSKTCSFQMRVESRKDHPDLRGPTI-------------MDIEDL 199
Query: 338 VHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNL 395
V +G+ ++ CPY+ SR +VP AD+ +PY LL AR++ + L N IVI+DEAHN+
Sbjct: 200 VKVGQRLKICPYFASRELVPQADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNI 257
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 4/71 (5%)
Query: 15 FPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWV-VDQKQKQKQKQ 73
FP++PY +Q +M+ + L +G +LESPTGTGKTLS++CS+L W+ Q + QKQ
Sbjct: 13 FPFEPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQKQMV 72
Query: 74 KYETMIKSDHS 84
K E K+D S
Sbjct: 73 KME---KADFS 80
>sp|A6QLJ0|ERCC2_BOVIN TFIIH basal transcription factor complex helicase XPD subunit
OS=Bos taurus GN=ERCC2 PE=2 SV=1
Length = 760
Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 174/730 (23%), Positives = 292/730 (40%), Gaps = 127/730 (17%)
Query: 218 EVLKVYFCSRTHSQLSQFIKELRKTVFANEIKV--------VCLGSRKNFCINEEVLRLG 269
EV K+ +CSRT ++ + I+ELRK + E + + L SRKN CI+ EV L
Sbjct: 66 EVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLPFLGLALSSRKNLCIHPEVTPLR 125
Query: 270 NSTHINERCLELQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQ 329
++ +C L + +R + C + R
Sbjct: 126 FGKDVDGKCHSLTASY-----------VRAQYQRDSSLPHCRFYEEFDVHG--RQVPLPT 172
Query: 330 GALDIEDLVHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNL-KNNIVI 388
G +++DL +GR CPY+ +R + A++VV Y LL + + L + +V+
Sbjct: 173 GIYNLDDLKAVGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVV 232
Query: 389 IDEAHNLADSLINMYNAKITLSQLENVHSHLEKYFGRFCSL-------LGPGNRRYIQTL 441
DEAHN+ + I+ + +T L+ ++LE + L RR ++ L
Sbjct: 233 FDEAHNIDNVCIDSMSVNLTRRTLDRCQANLETLQKTVLRIKETDEQRLREEYRRLVEGL 292
Query: 442 MVFTRAFLQVLLKEKDE---NDVRQDSENSTGAKHAFDSSVAINEFLFSLNIDNINLVKL 498
+ A +E D N V D K A S+ E L +L
Sbjct: 293 REASAA------RETDAHLANPVLPDE----VLKEAVPGSIRTAEHFLGF------LRRL 336
Query: 499 LKYIKESNIIHKV---------SGYGDKAASLQKGSVLKDGGENYE------EGSILSGF 543
L+Y+K + V SG + +K L+ E E S L+ F
Sbjct: 337 LEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKP--LRFCAERLRSLLYTLEISDLTDF 394
Query: 544 QSLVDM--LISLTNNDGDGRIIISKARPISSGQQGQQGGYLKYVMLTGEKVFSEIVEQAH 601
L + +L + G II + P L + + + E+
Sbjct: 395 SPLTLLANFATLVSTYAKGFTIIIE--PFDDRTPTIANPILHFSCMDASLAIKPVFERFQ 452
Query: 602 AVILAGGTLQPIEETRERLFPWL---SPNKFHFFSCSHIVPPESILPVALSCGPTGKSFD 658
+VI+ GTL P++ ++P + P F+ + + + P+ + G +
Sbjct: 453 SVIITSGTLSPLD-----IYPKILDFHPVTMATFTMT--LARVCLCPMIIGRGNDQVAIS 505
Query: 659 FSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKK 718
+ +R A+I G LL + +VVP+GI+ FF S++Y+E +W GIL+ I + K
Sbjct: 506 SKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRNK 565
Query: 719 HVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGM 778
+F E + L++YQ+ + GA+LL+V GK+SEGI+F
Sbjct: 566 LLFIETQDGAETSVALEKYQEACEN-----------GRGAILLSVARGKVSEGIDFVHHY 614
Query: 779 GRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSC 838
GR ++M G+PY + L R++++ F I
Sbjct: 615 GRAVIMFGVPYVYTQSRILKARLEYLRD------------------------QFQI---- 646
Query: 839 RGRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWI 898
R ++ M+ Q +GRAIR D+ ++ D R+A + KR KLPRWI
Sbjct: 647 --RENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFA-RADKR------GKLPRWI 697
Query: 899 KDRLVSSTNN 908
++ L + N
Sbjct: 698 QEHLTDANLN 707
>sp|Q5RJZ1|RTEL1_RAT Regulator of telomere elongation helicase 1 OS=Rattus norvegicus
GN=Rtel1 PE=2 SV=2
Length = 1274
Score = 154 bits (388), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 165/349 (47%), Gaps = 50/349 (14%)
Query: 577 QQGGYLKYVMLTGEKVFSEIVEQ-AHAVILAGGTLQPIEETRERL---FPWLSPNKFHFF 632
+QG L Y + E+V+Q +IL GTL P+ + FP N
Sbjct: 448 KQGKVLSYWCFSPSHSMRELVQQGVRTLILTSGTLAPLSSFALEMQIPFPVCLEN----- 502
Query: 633 SCSHIVPPESILPVALSCGPTGKSFDFSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFF 692
HI+ + + GP G +Y R S + LG L N+ VVP G++VFF
Sbjct: 503 --PHIIDKNQLWVGVIPRGPDGVQLSSAYDKRFSEECLSSLGKALGNIARVVPHGLLVFF 560
Query: 693 PSFEYVERVYGAWKSLGILDRIMKKKHVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDS 752
PS+ +E+ W++ G+ ++ K +F EPR V+ Y + + + S
Sbjct: 561 PSYPVMEKSLEFWQAQGMSKKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPGS------ 614
Query: 753 TPLNGAMLLAVVGGKISEGINFSDGMGRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNS 812
NGA LAV GK SEG++FSD GR +++ GLPYP + ++ +++ ++ +
Sbjct: 615 ---NGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMDPRVILKMQFLDEM----- 666
Query: 813 KTLNTSASDAYYNGDAQAGFGILRSCRGRGKEYYENLCMKAVNQSIGRAIRHINDHAAIL 872
G ++ G L G+E+Y+ +AVNQ+IGR IRH +D+ AI
Sbjct: 667 ------------KGRSRVGGQCL-----SGQEWYQQQASRAVNQAIGRVIRHRHDYGAIF 709
Query: 873 LVDLRYASESSKRSCSHPANKLPRWIKDRLVSSTNNYGEVHRLLHQFFK 921
L D R+A ++ +H LP W++ L +N+G V R + QFF+
Sbjct: 710 LCDHRFAYADAR---AH----LPSWVRPYL-KVYDNFGRVIRDVAQFFR 750
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 92/178 (51%), Gaps = 27/178 (15%)
Query: 218 EVLKVYFCSRTHSQLSQFIKELRKTVFANEIKVVCLGSRKNFCINEEVLRLGNSTHINER 277
++ K+ + SRTHSQL+Q I ELR T + KV LGSR+ CI+ EV +
Sbjct: 105 DIPKIIYASRTHSQLTQVIGELRNTSY--RPKVCVLGSREQLCIHPEVKK---------- 152
Query: 278 CLELQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDL 337
+ N + +C R+ A C + + +K E++ LDIEDL
Sbjct: 153 --QESNHMQISLC-----------RKKVASRSCHFYNNVE-EKSLEQELATP-ILDIEDL 197
Query: 338 VHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNL 395
V G + CPYY SR++ AD++ +PY LL +R++ ++LK +VI DEAHN+
Sbjct: 198 VKNGSKHKVCPYYLSRNLKQQADIIFMPYNYLLDAKSRKAHNIDLKGTVVIFDEAHNV 255
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 15 FPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQW 61
FP++PY Q ++M + L+ +LESPTGTGKTL ++C+ L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAW 59
>sp|B3NSW1|RTEL1_DROER Regulator of telomere elongation helicase 1 homolog OS=Drosophila
erecta GN=GG18780 PE=3 SV=1
Length = 985
Score = 152 bits (385), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 171/371 (46%), Gaps = 70/371 (18%)
Query: 574 QQG--QQGGYL---KYVMLTGEKVFSEIVE----------------QAHAVILAGGTLQP 612
QQG QQGG+L +G ++I+ Q +VIL GTL P
Sbjct: 426 QQGAKQQGGWLGKGTIAAASGTSKVAKIINFWCFNPGFGMEQLLNTQVRSVILTSGTLAP 485
Query: 613 IEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFDFSYGSRSSSAMIEE 672
++ L L+ HIV + + GP + +Y +R + I
Sbjct: 486 LKP----LIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDRQQLISNYANRDNPKYISS 541
Query: 673 LGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKKHVFREPRGNTHVES 732
LG + N+ +VP+G++VFFPS+ + + AW++ G+ I KK +F EPR S
Sbjct: 542 LGQTILNVSRIVPDGLLVFFPSYPMLNKCVDAWQASGLWADISCKKPIFLEPRSKDQFTS 601
Query: 733 VLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGMGRCIVMVGLPYPSP 792
++E+ + I DS GA+ +AV GK+SEG++F+D GR +++ GLP+P
Sbjct: 602 TMEEFYQAI--------RDS---KGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPL 650
Query: 793 SNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSCRGRGKEYYENLCMK 852
+ +++ + +++E ++ L+ G+E+Y +
Sbjct: 651 KDPKVILKRRYLEANRTRENQLLS-------------------------GQEWYNLDATR 685
Query: 853 AVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWIKDRL--VSSTNNYG 910
AVNQ+IGR IRH ND+ AILL D R+ S +L +WI+ L + +G
Sbjct: 686 AVNQAIGRVIRHRNDYGAILLCDSRFKDASQ-------VQQLSKWIRGHLGDRPQCSPFG 738
Query: 911 EVHRLLHQFFK 921
+ R L QFFK
Sbjct: 739 PIVRELRQFFK 749
Score = 119 bits (299), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 99/178 (55%), Gaps = 27/178 (15%)
Query: 219 VLKVYFCSRTHSQLSQFIKELRKTVFANEIKVVCLGSRKNFCINEEVLRLGNSTHINERC 278
V KV + SRTHSQL+Q ++EL++T +AN ++ V LGSR CI+ EV+R
Sbjct: 106 VPKVIYASRTHSQLTQAMRELKRTAYAN-MRSVVLGSRDQLCIHPEVMR----------- 153
Query: 279 LELQNKKKNEICKIKNLGAEGKVR-RTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDL 337
E N K +CK++ + R ++ P LR + +DIEDL
Sbjct: 154 -EQGNSNKTNMCKLRVHSKTCTFQMRVESRKDHPDLRGPSI-------------MDIEDL 199
Query: 338 VHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNL 395
V +G+ ++ CPY+ SR +VP AD+ +PY LL AR++ + L N IVI+DEAHN+
Sbjct: 200 VKVGQRLKICPYFASRELVPQADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNI 257
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 4/71 (5%)
Query: 15 FPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWV-VDQKQKQKQKQ 73
FP++PY +Q +M+ + L +G +LESPTGTGKTLS++CS+L W+ Q + Q+Q
Sbjct: 13 FPFEPYPVQRAYMEKVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQQQMV 72
Query: 74 KYETMIKSDHS 84
K E K+D S
Sbjct: 73 KIE---KADFS 80
>sp|B4JNS2|RTEL1_DROGR Regulator of telomere elongation helicase 1 homolog OS=Drosophila
grimshawi GN=GH24089 PE=3 SV=1
Length = 986
Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 157/322 (48%), Gaps = 49/322 (15%)
Query: 602 AVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFDFSY 661
+VIL GTL P++ L L+ HIV + + GP + +Y
Sbjct: 476 SVILTSGTLAPLKP----LIAELAIPVAQHLENPHIVNEAQVYVKIIGTGPDREQLISNY 531
Query: 662 GSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKKHVF 721
+R + I LG + N+ +VP+G++VFFPS+ + + AW++ G+ I +K +F
Sbjct: 532 KNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNQCVDAWQASGLWADISSRKPIF 591
Query: 722 REPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGMGRC 781
EPRG S ++E+ + I DS GA +AV GK+SEG++F+D GR
Sbjct: 592 LEPRGKDQFTSTMEEFYQAI--------RDS---KGACFMAVCRGKVSEGLDFADRNGRA 640
Query: 782 IVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSCRGR 841
+++ GLP+P + +++ + +++E TN N S
Sbjct: 641 VIITGLPFPPLKDPKVILKRRYLE----TNRTRENQLLS--------------------- 675
Query: 842 GKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWIKDR 901
G E+Y +AVNQ+IGR IRH ND+ AILL D R+ S +L +WI++
Sbjct: 676 GNEWYNLEATRAVNQAIGRVIRHRNDYGAILLCDARFQDASQ-------VQQLSKWIRNH 728
Query: 902 LVS--STNNYGEVHRLLHQFFK 921
L + ++ +G + R L QFFK
Sbjct: 729 LGARPQSSPFGPIVRELRQFFK 750
Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 100/178 (56%), Gaps = 27/178 (15%)
Query: 219 VLKVYFCSRTHSQLSQFIKELRKTVFANEIKVVCLGSRKNFCINEEVLR-LGNSTHINER 277
V KV + SRTHSQL+Q ++EL++T +AN ++ V LGSR CI+ +V+R GNS +N
Sbjct: 108 VPKVIYASRTHSQLTQAMRELKRTAYAN-MRAVVLGSRDQLCIHPDVMREQGNSNKVN-- 164
Query: 278 CLELQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDL 337
+CK+K K+ + + S K FR +DIEDL
Sbjct: 165 -----------MCKLK--------VHAKSCTFQLRVESKKDHPDFRGP----SIMDIEDL 201
Query: 338 VHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNL 395
V +G+ ++ CPY+ S+ +V +AD+ +PY LL AR++ + L N IVI+DE HN+
Sbjct: 202 VKVGQRLKMCPYFASKELVNSADITFMPYNYLLDPKARKANKIELSNAIVILDEGHNI 259
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 15 FPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWV-VDQKQKQKQKQ 73
FP++PY +Q +M+ + L +G +LESPTGTGKTLS++CS L W+ Q + Q Q
Sbjct: 13 FPFEPYDVQRAYMEKVIICLRDGTNGVLESPTGTGKTLSLLCSTLGWIRTRQSEVQLNMQ 72
Query: 74 KYE 76
K +
Sbjct: 73 KLQ 75
>sp|B4L1Z2|RTEL1_DROMO Regulator of telomere elongation helicase 1 homolog OS=Drosophila
mojavensis GN=GI15901 PE=3 SV=1
Length = 1014
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 158/325 (48%), Gaps = 49/325 (15%)
Query: 599 QAHAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFD 658
Q +VIL GTL P++ L L+ HIV + + GP +
Sbjct: 473 QVRSVILTSGTLAPLKP----LIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDREQLI 528
Query: 659 FSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKK 718
+Y +R + I LG + N+ +VP+G++VFFPS+ + + AW++ G+ + +K
Sbjct: 529 SNYKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNQCVDAWQASGLWADLSSRK 588
Query: 719 HVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGM 778
+F EPRG S ++E+ + I DS GA +AV GK+SEG++F+D
Sbjct: 589 PIFLEPRGKDQFTSTMEEFYQAI--------RDS---KGACFMAVCRGKVSEGLDFADRN 637
Query: 779 GRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSC 838
GR +++ GLP+P + +++ + +++E TN N S
Sbjct: 638 GRAVIITGLPFPPLKDPKVILKRRYLE----TNRTKENQLLS------------------ 675
Query: 839 RGRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWI 898
G+E+Y +AVNQ+IGR IRH +D+ AILL D R+ S +L +WI
Sbjct: 676 ---GQEWYNLDATRAVNQAIGRVIRHRHDYGAILLCDARFQDASQ-------VQQLSKWI 725
Query: 899 KDRLVS--STNNYGEVHRLLHQFFK 921
+ L + ++ +G + R L QFFK
Sbjct: 726 RGHLGARPQSSPFGPIVRELRQFFK 750
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 100/178 (56%), Gaps = 27/178 (15%)
Query: 219 VLKVYFCSRTHSQLSQFIKELRKTVFANEIKVVCLGSRKNFCINEEVLR-LGNSTHINER 277
V KV + SRTHSQL+Q ++EL++T +A+ ++ V LGSR CI+ +V++ GNS +N
Sbjct: 107 VPKVIYASRTHSQLTQAMRELKRTAYAS-MRSVVLGSRDQLCIHPDVMKEQGNSNKVN-- 163
Query: 278 CLELQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDL 337
+CK+K K S + S K FR +DIEDL
Sbjct: 164 -----------MCKLK--------VHAKTCSFQLRVESKKDHPDFRGP----SIMDIEDL 200
Query: 338 VHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNL 395
V +G+ ++ CPYY S+ +V +AD+ +PY LL AR++ + L N IVI+DEAHN+
Sbjct: 201 VKVGQRLKMCPYYASKELVSSADITFMPYNYLLDPKARKANKIELSNTIVILDEAHNI 258
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 15 FPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWV-VDQKQKQKQKQ 73
FP++PY +Q FM+ + L +G +LESPTGTGKTLS++CS+L W+ Q + Q Q
Sbjct: 13 FPFEPYEVQRAFMEKVIMCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQINMQ 72
Query: 74 KYE 76
K +
Sbjct: 73 KLQ 75
>sp|B4NDG5|RTEL1_DROWI Regulator of telomere elongation helicase 1 homolog OS=Drosophila
willistoni GN=GK24923 PE=3 SV=1
Length = 998
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 156/325 (48%), Gaps = 49/325 (15%)
Query: 599 QAHAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFD 658
Q +VIL GTL P++ L L+ HIV + + GP +
Sbjct: 478 QVRSVILTSGTLAPLKP----LIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDRQQLI 533
Query: 659 FSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKK 718
++ +R + I LG + N+ +VP+G++VFFPS+ + + AW++ G+ I KK
Sbjct: 534 SNFKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNKCVDAWQTSGLWADIAAKK 593
Query: 719 HVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGM 778
+F EPRG + ++E+ + I DS GA +AV GK+SEG++F+D
Sbjct: 594 PIFLEPRGKDQFTTTMEEFYQAI--------RDS---KGACFMAVCRGKVSEGLDFADRN 642
Query: 779 GRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSC 838
GR +++ GLPYP + +++ + +++E ++ L
Sbjct: 643 GRAVIITGLPYPPLKDPKVILKRRYLEANRTKENQLLT---------------------- 680
Query: 839 RGRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWI 898
G+E+Y +AVNQ+IGR IRH +D+ AILL D R+ S +L +WI
Sbjct: 681 ---GQEWYNLDATRAVNQAIGRVIRHRHDYGAILLCDSRFQDNSQ-------VQQLSKWI 730
Query: 899 KDRLVS--STNNYGEVHRLLHQFFK 921
+ L + + +G + R L QFF+
Sbjct: 731 RGHLGARPQCSPFGPIVRELRQFFR 755
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 27/178 (15%)
Query: 219 VLKVYFCSRTHSQLSQFIKELRKTVFANEIKVVCLGSRKNFCINEEVLR-LGNSTHINER 277
V KV + SRTHSQL+Q ++EL+++ +A ++ V LGSR CI+ EV+R GNS +N
Sbjct: 108 VPKVIYASRTHSQLTQAMRELKRSAYAG-MRSVVLGSRDQLCIHPEVMREQGNSNKVN-- 164
Query: 278 CLELQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDL 337
+CK++ +K S + S K FR +DIEDL
Sbjct: 165 -----------MCKMR--------VHSKTCSFQLRVESKKDHPDFRGP----SIMDIEDL 201
Query: 338 VHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNL 395
V +G+ ++ CPY+ S+ +V AD+ +PY LL AR++ + L N IVI+DEAHN+
Sbjct: 202 VKVGQKLKMCPYFASKELVNDADITFMPYNYLLDPMARKANKIELSNTIVILDEAHNI 259
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 15 FPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWV-VDQKQKQKQKQ 73
FP++PY +Q FM+ + L +G +LESPTGTGKTLS++CS+L W+ Q ++QKQ +
Sbjct: 13 FPFEPYEVQRAFMEKVIICLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEQQKQIR 72
Query: 74 KYE 76
K +
Sbjct: 73 KLQ 75
>sp|Q0VGM9|RTEL1_MOUSE Regulator of telomere elongation helicase 1 OS=Mus musculus
GN=Rtel1 PE=2 SV=2
Length = 1203
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 163/349 (46%), Gaps = 50/349 (14%)
Query: 577 QQGGYLKYVMLTGEKVFSEIVEQ-AHAVILAGGTLQPIEETRERL---FPWLSPNKFHFF 632
+QG L Y + + E+V Q +IL GTL P+ + FP N
Sbjct: 448 KQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLEN----- 502
Query: 633 SCSHIVPPESILPVALSCGPTGKSFDFSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFF 692
HI+ + + GP G +Y R S + LG L N+ VVP G++VFF
Sbjct: 503 --PHIIDKNQLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFF 560
Query: 693 PSFEYVERVYGAWKSLGILDRIMKKKHVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDS 752
PS+ +E+ W+ G+ ++ K +F EPR V+ Y + + + +S
Sbjct: 561 PSYPVMEKSLEFWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPAS------ 614
Query: 753 TPLNGAMLLAVVGGKISEGINFSDGMGRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNS 812
NGA LAV GK SEG++FSD GR +++ GLPYP + ++ +++ ++ +
Sbjct: 615 ---NGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFLDEM----- 666
Query: 813 KTLNTSASDAYYNGDAQAGFGILRSCRGRGKEYYENLCMKAVNQSIGRAIRHINDHAAIL 872
G + G L G+E+Y+ +AVNQ+IGR IRH +D+ AI
Sbjct: 667 ------------RGRSGVGGQCL-----SGQEWYQQQASRAVNQAIGRVIRHRHDYGAIF 709
Query: 873 LVDLRYASESSKRSCSHPANKLPRWIKDRLVSSTNNYGEVHRLLHQFFK 921
L D R+A ++ +LP W++ L +N+G V R + QFF+
Sbjct: 710 LCDHRFAYADAR-------AQLPSWVRPYL-KVYDNFGHVIRDVAQFFR 750
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 93/179 (51%), Gaps = 29/179 (16%)
Query: 218 EVLKVYFCSRTHSQLSQFIKELRKTVFANEIKVVCLGSRKNFCINEEVLRLGNSTHINER 277
++ K+ + SRTHSQL+Q I+ELR T + KV LGSR+ CI+ EV + S H+
Sbjct: 105 DIPKIIYASRTHSQLTQVIRELRNTAY--RPKVCVLGSREQLCIHPEVKK-QESNHMQ-- 159
Query: 278 CLELQNKK-KNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIED 336
+ L KK + C N E K L++ I LDIED
Sbjct: 160 -ISLCRKKVASRSCHFYN-NVEAKF----------------LEQDLATPI-----LDIED 196
Query: 337 LVHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNL 395
LV G + CPYY SR+M AD++ +PY LL +R++ ++LK +VI DEAHN+
Sbjct: 197 LVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNV 255
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 15 FPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQW 61
FP++PY Q ++M + L+ +LESPTGTGKTL ++CS L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>sp|O08811|ERCC2_MOUSE TFIIH basal transcription factor complex helicase XPD subunit
OS=Mus musculus GN=Ercc2 PE=2 SV=2
Length = 760
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 163/720 (22%), Positives = 285/720 (39%), Gaps = 107/720 (14%)
Query: 218 EVLKVYFCSRTHSQLSQFIKELRKTVFANEIKV--------VCLGSRKNFCINEEVLRLG 269
EV K+ +CSRT ++ + I+ELRK + E + + L SRKN CI+ EV L
Sbjct: 66 EVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLPFLGLALSSRKNLCIHPEVTPLR 125
Query: 270 NSTHINERCLELQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQ 329
++ +C L + ++ + C + R
Sbjct: 126 FGKDVDGKCHSLTASY-----------VRAQYQQDASLPHCRFYEEFDIHG--RQMPLPA 172
Query: 330 GALDIEDLVHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNL-KNNIVI 388
G +++DL LG+ CPY+ +R + A++VV Y LL + + L + +V+
Sbjct: 173 GIYNLDDLKALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVV 232
Query: 389 IDEAHNLADSLINMYNAKITLSQLENVHSHLEKYFGRFCSLLGPGNRRYIQTLMVFTRAF 448
DEAHN+ + I+ + +T L+ S+L+ + +R
Sbjct: 233 FDEAHNIDNVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETDEQRLRDEYRRLVEGL 292
Query: 449 LQVLLKEKDENDVRQDSENSTGAKHAFDSSVAINEFLFSLNIDNINLVKLLKYIKESNII 508
+ + + + + + A S+ E L +LL+Y+K +
Sbjct: 293 REASVARETDAHLANPVLPDEVLQEAVPGSIRTAEHFLGF------LRRLLEYVKWRLRV 346
Query: 509 HKV---------SGYGDKAASLQKGSVLKDGGENYE------EGSILSGFQSLVDM--LI 551
V SG + +K L+ E E + L+ F L +
Sbjct: 347 QHVVQESPPAFLSGLAQRVCIQRKP--LRFCAERLRSLLHTLEIADLADFSPLTLLANFA 404
Query: 552 SLTNNDGDGRIIISKARPISSGQQGQQGGYLKYVMLTGEKVFSEIVEQAHAVILAGGTLQ 611
+L + G II + P L + + + E+ +VI+ GTL
Sbjct: 405 TLVSTYAKGFTIIIE--PFDDRTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLS 462
Query: 612 PIEETRERLFPWL---SPNKFHFFSCSHIVPPESILPVALSCGPTGKSFDFSYGSRSSSA 668
P++ ++P + P F+ + + + P+ + G + + +R A
Sbjct: 463 PLD-----IYPKILDFHPVTMATFTMT--LARVCLCPMIIGRGNDQVAISSKFETREDIA 515
Query: 669 MIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKKHVFREPRGNT 728
+I G LL + +VVP+GI+ FF S++Y+E +W GIL+ I + K +F E +
Sbjct: 516 VIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRNKLLFIETQDGA 575
Query: 729 HVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGMGRCIVMVGLP 788
L++YQ+ + GA+LL+V GK+SEGI+F GR ++M G+P
Sbjct: 576 ETSVALEKYQEACEN-----------GRGAILLSVARGKVSEGIDFVHHYGRAVIMFGVP 624
Query: 789 YPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSCRGRGKEYYEN 848
Y + L R++++ F I R ++
Sbjct: 625 YVYTQSRILKARLEYLRD------------------------QFQI------RENDFLTF 654
Query: 849 LCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWIKDRLVSSTNN 908
M+ Q +GRAIR D+ ++ D R+A + KR KLPRWI++ L S N
Sbjct: 655 DAMRHAAQCVGRAIRGKTDYGLMVFADKRFA-RADKR------GKLPRWIQEHLTDSNLN 707
>sp|B4M891|RTEL1_DROVI Regulator of telomere elongation helicase 1 homolog OS=Drosophila
virilis GN=GJ16649 PE=3 SV=1
Length = 1005
Score = 150 bits (378), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 157/322 (48%), Gaps = 49/322 (15%)
Query: 602 AVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFDFSY 661
+VIL GTL P++ L L+ HIV + + GP + +Y
Sbjct: 475 SVILTSGTLAPLKP----LIAELAIPVAQHLENPHIVDRSQVYVKIIGTGPDREQLISNY 530
Query: 662 GSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKKHVF 721
+R + I LG + N+ +VP+G++VFFPS+ + + AW++ G+ I +K +F
Sbjct: 531 KNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNQCVDAWQASGLWADISCRKPIF 590
Query: 722 REPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGMGRC 781
EPRG S ++E+ + I DS GA +AV GK+SEG++F+D GR
Sbjct: 591 LEPRGKDQFTSTMEEFYQAI--------RDS---KGACFMAVCRGKVSEGLDFADRNGRA 639
Query: 782 IVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSCRGR 841
+++ GLP+P + +++ + +++E TN N S
Sbjct: 640 VIITGLPFPPLKDPKVVLKRRYLE----TNRTKENQLLS--------------------- 674
Query: 842 GKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWIKDR 901
G+E+Y +AVNQ+IGR IRH ND+ AILL D R+ S +L +WI+
Sbjct: 675 GQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDARFQDMSQ-------VQQLSKWIRGH 727
Query: 902 LVS--STNNYGEVHRLLHQFFK 921
L + ++ +G + R L QFFK
Sbjct: 728 LGARPQSSPFGPIVRELRQFFK 749
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 99/178 (55%), Gaps = 27/178 (15%)
Query: 219 VLKVYFCSRTHSQLSQFIKELRKTVFANEIKVVCLGSRKNFCINEEVLR-LGNSTHINER 277
V KV + SRTHSQLSQ ++EL++T +AN +K V LGSR CI+ +V+R GNS +N
Sbjct: 105 VPKVIYASRTHSQLSQAMRELKRTAYAN-MKSVVLGSRDQLCIHPDVMREQGNSNKVN-- 161
Query: 278 CLELQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDL 337
+CK+K K S + S K FR +DIEDL
Sbjct: 162 -----------MCKLK--------VHAKTCSFQLRVESKKDHPDFRGP----SIMDIEDL 198
Query: 338 VHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNL 395
V +G+ ++ CPY+ S+ +V AD+ +PY LL AR++ + L N IVI+DEAHN+
Sbjct: 199 VKVGQRLKMCPYFASKELVNGADITFMPYNYLLDPKARKANKIELSNTIVILDEAHNI 256
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 44/61 (72%), Gaps = 3/61 (4%)
Query: 15 FPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQK 74
FP++PY +Q +M+ + L +G +LESPTGTGKTLS++C++L W+ + +Q ++Q+
Sbjct: 13 FPFEPYEVQRAYMEKVIMCLRDGTNGVLESPTGTGKTLSLLCASLAWI---RTRQSEQQQ 69
Query: 75 Y 75
Y
Sbjct: 70 Y 70
>sp|P18074|ERCC2_HUMAN TFIIH basal transcription factor complex helicase XPD subunit
OS=Homo sapiens GN=ERCC2 PE=1 SV=1
Length = 760
Score = 150 bits (378), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 172/731 (23%), Positives = 293/731 (40%), Gaps = 129/731 (17%)
Query: 218 EVLKVYFCSRTHSQLSQFIKELRKTVFANEIKV--------VCLGSRKNFCINEEVLRLG 269
EV K+ +CSRT ++ + I+ELRK + E + + L SRKN CI+ EV L
Sbjct: 66 EVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPEVTPLR 125
Query: 270 NSTHINERCLELQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEIS-Q 328
++ +C +L A + + + P R ++ E+
Sbjct: 126 FGKDVDGKC--------------HSLTASYVRAQYQHDTSLPHCRFYEEFDAHGREVPLP 171
Query: 329 QGALDIEDLVHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNL-KNNIV 387
G +++DL LGR CPY+ +R + A++VV Y LL + + L + +V
Sbjct: 172 AGIYNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVV 231
Query: 388 IIDEAHNLADSLINMYNAKITLSQLENVHSHLEKYFGRFCSL-------LGPGNRRYIQT 440
+ DEAHN+ + I+ + +T L+ +LE + L RR ++
Sbjct: 232 VFDEAHNIDNVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEG 291
Query: 441 LMVFTRAFLQVLLKEKDE---NDVRQDSENSTGAKHAFDSSVAINEFLFSLNIDNINLVK 497
L + A +E D N V D + A S+ E L +
Sbjct: 292 LREASAA------RETDAHLANPVLPDE----VLQEAVPGSIRTAEHFLGF------LRR 335
Query: 498 LLKYIKESNIIHKV---------SGYGDKAASLQKGSVLKDGGENYE------EGSILSG 542
LL+Y+K + V SG + +K L+ E E + L+
Sbjct: 336 LLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKP--LRFCAERLRSLLHTLEITDLAD 393
Query: 543 FQSLVDM--LISLTNNDGDGRIIISKARPISSGQQGQQGGYLKYVMLTGEKVFSEIVEQA 600
F L + +L + G II + P L + + + E+
Sbjct: 394 FSPLTLLANFATLVSTYAKGFTIIIE--PFDDRTPTIANPILHFSCMDASLAIKPVFERF 451
Query: 601 HAVILAGGTLQPIEETRERLFPWL---SPNKFHFFSCSHIVPPESILPVALSCGPTGKSF 657
+VI+ GTL P++ ++P + P F+ + + + P+ + G +
Sbjct: 452 QSVIITSGTLSPLD-----IYPKILDFHPVTMATFTMT--LARVCLCPMIIGRGNDQVAI 504
Query: 658 DFSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKK 717
+ +R A+I G LL + +VVP+GI+ FF S++Y+E +W GIL+ I +
Sbjct: 505 SSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRN 564
Query: 718 KHVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDG 777
K +F E + L++YQ+ + GA+LL+V GK+SEGI+F
Sbjct: 565 KLLFIETQDGAETSVALEKYQEACEN-----------GRGAILLSVARGKVSEGIDFVHH 613
Query: 778 MGRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRS 837
GR ++M G+PY + L R++++ F I
Sbjct: 614 YGRAVIMFGVPYVYTQSRILKARLEYLRD------------------------QFQI--- 646
Query: 838 CRGRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRW 897
R ++ M+ Q +GRAIR D+ ++ D R+A + KLPRW
Sbjct: 647 ---RENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKR-------GKLPRW 696
Query: 898 IKDRLVSSTNN 908
I++ L + N
Sbjct: 697 IQEHLTDANLN 707
Score = 35.8 bits (81), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 15 FPYK-PYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQW 61
FPY Y Q +M+ L +L+ G +LE P+GTGKT+S++ + +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 59
>sp|Q60452|ERCC2_CRIGR TFIIH basal transcription factor complex helicase XPD subunit
OS=Cricetulus griseus GN=ERCC2 PE=1 SV=1
Length = 760
Score = 149 bits (377), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 173/731 (23%), Positives = 296/731 (40%), Gaps = 129/731 (17%)
Query: 218 EVLKVYFCSRTHSQLSQFIKELRKTVFANEIKV--------VCLGSRKNFCINEEVLRLG 269
EV K+ +CSRT ++ + I+ELRK + E + + L SRKN CI+ EV L
Sbjct: 66 EVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLPFLGLALSSRKNLCIHPEVTPLR 125
Query: 270 NSTHINERCLELQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEIS-Q 328
++ +C +L A + + + P R ++ ++
Sbjct: 126 FGKDVDGKC--------------HSLTASYVRAQYQQDASLPHCRFYEEFDAHGRQVPLP 171
Query: 329 QGALDIEDLVHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNL-KNNIV 387
G +++DL LG+ CPY+ +R + A++VV Y LL + + L + +V
Sbjct: 172 AGIYNLDDLKALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVV 231
Query: 388 IIDEAHNLADSLINMYNAKITLSQLENVHSHLEKYFGRFCSL-------LGPGNRRYIQT 440
+ DEAHN+ + I+ + +T L+ S+L+ + L RR ++
Sbjct: 232 VFDEAHNIDNVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETDEQRLRDEYRRLVEG 291
Query: 441 LMVFTRAFLQVLLKEKDE---NDVRQDSENSTGAKHAFDSSVAINEFLFSLNIDNINLVK 497
L + A +E D N V D + A S+ E L +
Sbjct: 292 LREASAA------RETDAHLANPVLPDE----VLQEAVPGSIRTAEHFLGF------LRR 335
Query: 498 LLKYIKESNIIHKV---------SGYGDKAASLQKGSVLKDGGENYE------EGSILSG 542
LL+Y+K + V SG + +K L+ E E + L+
Sbjct: 336 LLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKP--LRFCAERLRSLLHTLEIADLAD 393
Query: 543 FQSLVDM--LISLTNNDGDGRIIISKARPISSGQQGQQGGYLKYVMLTGEKVFSEIVEQA 600
F L + +L + G II + P L + + + E+
Sbjct: 394 FSPLTLLANFATLVSTYAKGFTIIIE--PFDDRTPTIANPILHFSCMDASLAIKPVFERF 451
Query: 601 HAVILAGGTLQPIEETRERLFPWL---SPNKFHFFSCSHIVPPESILPVALSCGPTGKSF 657
+VI+ GTL P++ ++P + P F+ + + + P+ + G +
Sbjct: 452 QSVIITSGTLSPLD-----IYPKILDFHPVTMATFTMT--LARVCLCPMIIGRGNDQVAI 504
Query: 658 DFSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKK 717
+ +R A+I G LL + +VVP+GI+ FF S++Y+E +W GIL+ I +
Sbjct: 505 SSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRN 564
Query: 718 KHVFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDG 777
K +F E + L++YQ+ + GA+LL+V GK+SEGI+F
Sbjct: 565 KLLFIETQDGAETSVALEKYQEACEN-----------GRGAILLSVARGKVSEGIDFVHH 613
Query: 778 MGRCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRS 837
GR ++M G+PY + L R++++ F I
Sbjct: 614 YGRAVIMFGVPYVYTQSRILKARLEYLRD------------------------QFQI--- 646
Query: 838 CRGRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRW 897
R ++ M+ Q +GRAIR D+ ++ D R+A + KR KLPRW
Sbjct: 647 ---RENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFA-RADKR------GKLPRW 696
Query: 898 IKDRLVSSTNN 908
I++ L S N
Sbjct: 697 IQEHLTDSNLN 707
>sp|Q6H1L8|RTEL1_MUSSP Regulator of telomere elongation helicase 1 OS=Mus spretus GN=Rtel1
PE=2 SV=1
Length = 1203
Score = 147 bits (371), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 162/350 (46%), Gaps = 52/350 (14%)
Query: 577 QQGGYLKYVMLTGEKVFSEIVEQ-AHAVILAGGTLQPIEE-TRERLFPWLSPNKFHFFSC 634
+QG L Y + + E+V Q +IL GTL P+ E+ P F C
Sbjct: 448 KQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEKQIP--------FPVC 499
Query: 635 ---SHIVPPESILPVALSCGPTGKSFDFSYGSRSSSAMIEELGLLLCNLVSVVPEGIIVF 691
HI+ + + GP G +Y R S + LG L N+ VVP G++VF
Sbjct: 500 LENPHIIDKNQLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVF 559
Query: 692 FPSFEYVERVYGAWKSLGILDRIMKKKHVFREPRGNTHVESVLKEYQKTIDTLSSRPKED 751
FPS+ +E+ W+ G+ ++ K +F EPR V+ Y + + + +S
Sbjct: 560 FPSYPVMEKSLEFWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPAS----- 614
Query: 752 STPLNGAMLLAVVGGKISEGINFSDGMGRCIVMVGLPYPSPSNIELLERIKHIEGLGDTN 811
NGA LAV GK SEG++FSD GR +++ GLPYP + ++ +++ ++ +
Sbjct: 615 ----NGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFLDEM---- 666
Query: 812 SKTLNTSASDAYYNGDAQAGFGILRSCRGRGKEYYENLCMKAVNQSIGRAIRHINDHAAI 871
G + G L G+E+Y+ +AVNQ+IGR IRH +D+ AI
Sbjct: 667 -------------RGRSGVGGQCL-----SGQEWYQQQASRAVNQAIGRVIRHRHDYGAI 708
Query: 872 LLVDLRYASESSKRSCSHPANKLPRWIKDRLVSSTNNYGEVHRLLHQFFK 921
L D R+A ++ +LP W++ L +N+G R + QF +
Sbjct: 709 FLCDHRFAYADAR-------AQLPSWVRPYL-KVYDNFGHAIRDVAQFLR 750
Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 92/179 (51%), Gaps = 29/179 (16%)
Query: 218 EVLKVYFCSRTHSQLSQFIKELRKTVFANEIKVVCLGSRKNFCINEEVLRLGNSTHINER 277
++ K+ + SRTHSQ +Q I+ELR T + KV LGSR+ CI+ EV + S H+
Sbjct: 105 DIPKIIYASRTHSQPTQVIRELRNTAY--RPKVCVLGSREQLCIHPEVKK-QESNHMQ-- 159
Query: 278 CLELQNKK-KNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIED 336
+ L KK + C N E K L++ I LDIED
Sbjct: 160 -ISLCRKKVASRSCHFYN-NVEAKF----------------LEQDLATPI-----LDIED 196
Query: 337 LVHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNL 395
LV G + CPYY SR+M AD++ +PY LL +R++ ++LK +VI DEAHN+
Sbjct: 197 LVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNV 255
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 15 FPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQW 61
FP++PY Q ++M + L+ +LESPTGTGKTL ++CS L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>sp|Q16X92|RTEL1_AEDAE Regulator of telomere elongation helicase 1 homolog OS=Aedes
aegypti GN=AAEL008960 PE=3 SV=1
Length = 1010
Score = 147 bits (371), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 159/323 (49%), Gaps = 46/323 (14%)
Query: 600 AHAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFDF 659
A ++IL GTL P++ L ++ HI+ + + GP +S +
Sbjct: 481 ARSIILTSGTLAPLKPLISELDIPIAVR----LENPHIIDGSQVCVKIVGQGPDKESLNS 536
Query: 660 SYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKKH 719
SYG+R + I LG + + ++P G++VFFPS+ + + AW+ GI +I + K
Sbjct: 537 SYGNRDNPKYISSLGRTILSFCPIIPGGLLVFFPSYPLLNKCQEAWQETGIWAQISRTKP 596
Query: 720 VFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGMG 779
+F EPRG + + EY + I+ + GA+ +AV GK+SEG++F+D G
Sbjct: 597 IFVEPRGKDQFLNTMSEYYQKINDPDGK---------GAVFMAVCRGKVSEGLDFADMNG 647
Query: 780 RCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSCR 839
R +++ GLP+P + ++ + K+++ + ++ ++
Sbjct: 648 RAVIITGLPFPPLKDARVILKKKYLQEVRTRENEIIS----------------------- 684
Query: 840 GRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWIK 899
G E+Y +AVNQ+IGR IRH ND+ AILL D R+ + K ++L WI+
Sbjct: 685 --GDEWYSLEAARAVNQAIGRVIRHKNDYGAILLCDNRFHNHRQK-------SQLSSWIQ 735
Query: 900 DRLVSSTN-NYGEVHRLLHQFFK 921
L ++ + N+G + L +FF+
Sbjct: 736 KHLNTNQHQNFGPIIGELSRFFR 758
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 118/224 (52%), Gaps = 36/224 (16%)
Query: 175 LEEYESEEEGAIGGGKSKRKAGAGTISSSSDEEEEDGLDEEGEE--VLKVYFCSRTHSQL 232
L+E+E + +GG G+G ++ DG EG + V K+ + SRTHSQL
Sbjct: 78 LKEFEMVQRKKLGG-----DGGSGM--EELLDKLHDGCGPEGAKWGVPKIVYASRTHSQL 130
Query: 233 SQFIKELRKTVFANEIKVVCLGSRKNFCINEEVLRL-GNSTHINERCLELQNKKKNEICK 291
+Q ++E++ T ++ +K V LGSR CI+ EV + GNST N +CK
Sbjct: 131 TQVMQEMKNTSYSF-MKGVILGSRDQLCIHPEVSKEEGNSTKTN-------------LCK 176
Query: 292 IKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDLVHLGRHMRTCPYYG 351
K RT +F R ++ R E+ +DIEDLV +G +R CP++
Sbjct: 177 AKVQS------RTCSFYS----RVESCKE--RPEVVSNVIMDIEDLVKVGTKVRACPFFL 224
Query: 352 SRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNL 395
S+ ++ +AD++ +PY LL AR++ L + N I+I+DEAHN+
Sbjct: 225 SKELIESADILFMPYNYLLDPKARKANNLEISNTIIILDEAHNV 268
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 40/54 (74%)
Query: 15 FPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWVVDQKQK 68
FP++PY +Q D+M + L+N +LESPTGTGKTLS++CS+L WV+ +K +
Sbjct: 13 FPFEPYQVQRDYMSRVIECLQNSTNGVLESPTGTGKTLSLLCSSLAWVLHKKAQ 66
>sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1
PE=3 SV=1
Length = 1177
Score = 147 bits (370), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 161/353 (45%), Gaps = 46/353 (13%)
Query: 571 SSGQQGQQGGYLKYVMLTGEKVFSEIVEQ-AHAVILAGGTLQPIEE-TRERLFPWLSPNK 628
+S +QG L Y + E++ Q +IL GTL P+ T E P+
Sbjct: 441 ASSSTKKQGNVLSYWCFSPGFSMQELLRQEVRCIILTSGTLSPLSSFTCEMQIPFPVS-- 498
Query: 629 FHFFSCSHIVPPESILPVALSCGPTGKSFDFSYGSRSSSAMIEELGLLLCNLVSVVPEGI 688
H++ + I + GP G ++ R + +G L NL VVP G+
Sbjct: 499 ---LENPHVIQRDQIFVSIIEKGPDGVQLSTAFDRRFVPENMSSMGNTLVNLSRVVPHGL 555
Query: 689 IVFFPSFEYVERVYGAWKSLGILDRIMKKKHVFREPRGNTHVESVLKEYQKTIDTLSSRP 748
+VFFPS+ +++ W++ G DRI K +F EPRG V+ Y +D +S
Sbjct: 556 LVFFPSYPVMDKTLEFWRAKGHADRIENVKPMFVEPRGKGTFTEVIDGYYGKVDDPNS-- 613
Query: 749 KEDSTPLNGAMLLAVVGGKISEGINFSDGMGRCIVMVGLPYPSPSNIELLERIKHIEGLG 808
+G AV GK SEG++F+D GR +V+ GLP+P + ++ ++++++ +
Sbjct: 614 -------SGGSFFAVCRGKASEGLDFADTYGRGVVITGLPFPPRMDPRVVLKMQYLDEM- 665
Query: 809 DTNSKTLNTSASDAYYNGDAQAGFGILRSCRGRGKEYYENLCMKAVNQSIGRAIRHINDH 868
N + Y G+E+Y +AVNQ+IGR IRH D+
Sbjct: 666 -----CRNKISGVKYLT----------------GQEWYRQQASRAVNQAIGRVIRHREDY 704
Query: 869 AAILLVDLRYASESSKRSCSHPANKLPRWIKDRLVSSTNNYGEVHRLLHQFFK 921
AI L D R+ S ++ N+LP W++ V + +G + R + QFF+
Sbjct: 705 GAIFLCDHRFKSADAR-------NQLPSWVRP-YVKIYDGFGTMVRDVAQFFR 749
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 93/178 (52%), Gaps = 27/178 (15%)
Query: 218 EVLKVYFCSRTHSQLSQFIKELRKTVFANEIKVVCLGSRKNFCINEEVLRLGNSTHINER 277
++ K+ + SRTHSQL+Q + EL+ T + K+ LGSR+ CIN+EV+R S HI
Sbjct: 105 DIPKIIYASRTHSQLTQVVNELKNTSY--RPKICVLGSREQLCINQEVMR-HESNHI--- 158
Query: 278 CLELQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFRNEISQQGALDIEDL 337
K +C R K S + ++ +K EI LD+EDL
Sbjct: 159 --------KVHMC------------RAKVSSRSCIFYNNVDEKSTDKEIVN-SILDVEDL 197
Query: 338 VHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLKNNIVIIDEAHNL 395
V G+ R CPYY SRS+ AD++ +PY LL +R + + LK +VI DEAHN+
Sbjct: 198 VKTGKKQRVCPYYLSRSLKQHADVIFMPYNYLLDPKSRRAHNIELKGAVVIFDEAHNV 255
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 15 FPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQW 61
FP+ PY Q D+M + L+ +LESPTGTGKTL ++CS L W
Sbjct: 13 FPFTPYPCQEDYMSKVIECLQKKVNGVLESPTGTGKTLCLLCSTLAW 59
>sp|B0W9F4|RTEL1_CULQU Regulator of telomere elongation helicase 1 homolog OS=Culex
quinquefasciatus GN=CPIJ003765 PE=3 SV=1
Length = 978
Score = 146 bits (368), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 156/323 (48%), Gaps = 46/323 (14%)
Query: 600 AHAVILAGGTLQPIEETRERLFPWLSPNKFHFFSCSHIVPPESILPVALSCGPTGKSFDF 659
A ++IL GTL P++ L ++ HI+ + + GP +S +
Sbjct: 483 ARSIILTSGTLAPLKPLISELDIPIAVK----LENPHIIDGSQVCVKIVGQGPDKESLNS 538
Query: 660 SYGSRSSSAMIEELGLLLCNLVSVVPEGIIVFFPSFEYVERVYGAWKSLGILDRIMKKKH 719
SYG+R + I LG + + ++P G++VFFPS+ + + AW+ GI +I + K
Sbjct: 539 SYGNRDNPKYISSLGRTILSFCPIIPGGLLVFFPSYPLLNKCQEAWQETGIWAQISRTKP 598
Query: 720 VFREPRGNTHVESVLKEYQKTIDTLSSRPKEDSTPLNGAMLLAVVGGKISEGINFSDGMG 779
+F EPRG + + EY I+ + GA+ +AV GK+SEG++F+D G
Sbjct: 599 IFVEPRGKDQFLNTMTEYYAKINDPDGK---------GAVFMAVCRGKVSEGLDFADMNG 649
Query: 780 RCIVMVGLPYPSPSNIELLERIKHIEGLGDTNSKTLNTSASDAYYNGDAQAGFGILRSCR 839
R ++ GLP+P + ++ + ++++ + ++ ++
Sbjct: 650 RACIITGLPFPPLKDARVILKKRYLQEVRTRENEIIS----------------------- 686
Query: 840 GRGKEYYENLCMKAVNQSIGRAIRHINDHAAILLVDLRYASESSKRSCSHPANKLPRWIK 899
G E+Y +AVNQ+IGR IRH ND+ AILL D R+ + K +L WI+
Sbjct: 687 --GDEWYSLEAARAVNQAIGRVIRHKNDYGAILLCDNRFHNPRQKA-------QLSSWIQ 737
Query: 900 DRLVSSTN-NYGEVHRLLHQFFK 921
L ++ + +G + R L QFF+
Sbjct: 738 KHLNTAQHPTFGPIVRELSQFFR 760
Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 26/192 (13%)
Query: 205 DEEEEDGLDEEGEE-VLKVYFCSRTHSQLSQFIKELRKTVFANEIKVVCLGSRKNFCINE 263
DE E+ E G V K+ + SRTHSQL+Q ++E++ T + ++ V LGSR CI+
Sbjct: 104 DELNENSGKEGGRWGVPKIIYASRTHSQLTQAMQEMKNTSYGF-MRAVILGSRDQLCIHP 162
Query: 264 EVLRLGNSTHINERCLELQNKKKNEICKIKNLGAEGKVRRTKAFSGCPVLRSHKLQKGFR 323
EV + E N K +CK A+ + R +S + R
Sbjct: 163 EVAK------------EEGNAVKTNLCK-----AKIQARACSFYSRVEACKE-------R 198
Query: 324 NEISQQGALDIEDLVHLGRHMRTCPYYGSRSMVPTADLVVLPYQSLLSKSARESLGLNLK 383
EI+ +DIEDLV + ++ CP++ S+ ++ AD++ +PY LL AR++ L L
Sbjct: 199 PEITGSTIMDIEDLVRVSTKLKACPFFMSKELIENADVLFMPYNYLLDPKARKANNLELA 258
Query: 384 NNIVIIDEAHNL 395
N I+I+DEAHN+
Sbjct: 259 NTIIILDEAHNV 270
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 43/60 (71%)
Query: 15 FPYKPYSIQTDFMKALYCSLENGGVSMLESPTGTGKTLSIICSALQWVVDQKQKQKQKQK 74
FP++PY +Q D+M + L+N +LESPTGTGKTLS++CS+L W++ +K + + Q+
Sbjct: 13 FPFEPYQVQRDYMARVIECLQNSSNGVLESPTGTGKTLSLLCSSLAWILHKKAQVQASQR 72
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 356,381,858
Number of Sequences: 539616
Number of extensions: 15923125
Number of successful extensions: 55941
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 186
Number of HSP's that attempted gapping in prelim test: 54274
Number of HSP's gapped (non-prelim): 1120
length of query: 929
length of database: 191,569,459
effective HSP length: 127
effective length of query: 802
effective length of database: 123,038,227
effective search space: 98676658054
effective search space used: 98676658054
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)