Your job contains 1 sequence.
>002381
MKRELDYELAGSLDETSTQSLPQAGIQASDCVKAACENVRCKRFKVTKVNGFIVYSRVKR
SRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQMTVENV
IEETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVT
QSEGFGNESMSLIEVEAIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGV
SVVYMGGIKFQASGLRGIIRDGGILCSCSLCNGCRVIPPSKFEIHACKQYRRASQYICFE
NGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSFACVRCKGTFPITCVGKTGPGPLC
NSCVKSKKPQGTMTYTTGIRIRASGPKLVSRSSENDSMCISYQNNKRERKKTRKLLEADL
VSKSSSKSVSLRNLLKTRSPWELTRNSSRPGLIANSTPVTSVHKSSQSQRQRKITKKSKK
TVLISKPFENASPPLSFPNKSRWNITPKDQRLHKLVFDESGLPDGTEKLLEGYKNGLGII
CHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMFERKR
FLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTIL
LCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLN
AIKKYAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLI
PSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQ
LLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKRCSQLVTFKGT
SMLQKRVPACRIGSSSTDSTECVSGVEVG
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002381
(929 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2040550 - symbol:AT2G36720 "AT2G36720" species... 1226 3.3e-188 3
TAIR|locus:2147391 - symbol:AT5G36740 species:3702 "Arabi... 220 1.7e-29 5
TAIR|locus:2201021 - symbol:AT1G05380 "AT1G05380" species... 319 1.1e-24 1
TAIR|locus:2163961 - symbol:AT5G63900 "AT5G63900" species... 217 2.5e-23 3
TAIR|locus:2832118 - symbol:AT5G36670 species:3702 "Arabi... 155 2.0e-22 5
TAIR|locus:2178828 - symbol:AT5G58610 "AT5G58610" species... 202 1.4e-21 3
TAIR|locus:2086395 - symbol:ROS4 "AT3G14980" species:3702... 284 3.4e-21 2
TAIR|locus:2168088 - symbol:AT5G59830 "AT5G59830" species... 190 1.7e-11 1
UNIPROTKB|F5GWX5 - symbol:CHD4 "Chromodomain-helicase-DNA... 102 7.3e-07 4
UNIPROTKB|E2RHA0 - symbol:CHD4 "Uncharacterized protein" ... 102 7.4e-07 4
UNIPROTKB|Q14839 - symbol:CHD4 "Chromodomain-helicase-DNA... 102 7.4e-07 4
UNIPROTKB|F1SLR5 - symbol:CHD4 "Uncharacterized protein" ... 102 7.4e-07 4
MGI|MGI:1344380 - symbol:Chd4 "chromodomain helicase DNA ... 102 7.4e-07 4
UNIPROTKB|E9PU01 - symbol:Chd4 "Protein Chd4" species:101... 102 7.4e-07 4
UNIPROTKB|J9NW81 - symbol:CHD4 "Uncharacterized protein" ... 102 7.7e-07 4
UNIPROTKB|F1LM59 - symbol:Chd4 "Protein Chd4" species:101... 102 7.9e-07 4
UNIPROTKB|F1N3F6 - symbol:CHD4 "Uncharacterized protein" ... 102 9.6e-07 4
TAIR|locus:2173179 - symbol:AT5G13660 "AT5G13660" species... 145 2.3e-06 1
ZFIN|ZDB-GENE-071008-4 - symbol:aire "autoimmune regulato... 144 2.7e-06 1
MGI|MGI:109529 - symbol:Dpf2 "D4, zinc and double PHD fin... 139 5.9e-06 1
RGD|1311699 - symbol:Dpf2 "D4, zinc and double PHD finger... 136 1.3e-05 1
UNIPROTKB|E2R3L8 - symbol:DPF2 "Uncharacterized protein" ... 134 2.1e-05 1
UNIPROTKB|Q92785 - symbol:DPF2 "Zinc finger protein ubi-d... 134 2.1e-05 1
UNIPROTKB|F1NH79 - symbol:CHD4 "Uncharacterized protein" ... 102 2.5e-05 4
UNIPROTKB|A6QQS0 - symbol:DPF2 "D4, zinc and double PHD f... 133 2.7e-05 1
UNIPROTKB|Q5TH12 - symbol:ZMYND8 "Protein kinase C-bindin... 113 7.9e-05 2
UNIPROTKB|F1PXH9 - symbol:DPF2 "Uncharacterized protein" ... 128 0.00010 1
UNIPROTKB|J3KMZ8 - symbol:DPF2 "Zinc finger protein ubi-d... 128 0.00010 1
UNIPROTKB|F1RRH9 - symbol:DPF2 "Uncharacterized protein" ... 128 0.00010 1
TAIR|locus:2195945 - symbol:AT1G77250 "AT1G77250" species... 104 0.00010 3
UNIPROTKB|F1NBP6 - symbol:F1NBP6 "Uncharacterized protein... 128 0.00010 2
UNIPROTKB|C9JFR1 - symbol:AIRE "Autoimmune regulator" spe... 123 0.00011 1
UNIPROTKB|Q96L73 - symbol:NSD1 "Histone-lysine N-methyltr... 136 0.00014 5
MGI|MGI:1352748 - symbol:Dpf1 "D4, zinc and double PHD fi... 126 0.00015 1
ZFIN|ZDB-GENE-041014-190 - symbol:dpf3 "D4, zinc and doub... 125 0.00020 1
UNIPROTKB|J3QQU3 - symbol:PHF12 "PHD finger protein 12" s... 103 0.00020 1
UNIPROTKB|E1BIC4 - symbol:AIRE "Uncharacterized protein" ... 127 0.00022 1
UNIPROTKB|E7EN20 - symbol:TRIM33 "E3 ubiquitin-protein li... 128 0.00025 1
UNIPROTKB|F1SNJ6 - symbol:LOC100620590 "Uncharacterized p... 122 0.00026 1
ZFIN|ZDB-GENE-030131-5132 - symbol:dpf2l "D4, zinc and do... 124 0.00027 1
TAIR|locus:2162509 - symbol:AT5G22760 "AT5G22760" species... 106 0.00030 2
UNIPROTKB|H0Y612 - symbol:TRIM33 "E3 ubiquitin-protein li... 128 0.00031 1
UNIPROTKB|F1MWC1 - symbol:DPF1 "Uncharacterized protein" ... 123 0.00033 1
UNIPROTKB|F1MED1 - symbol:DPF1 "Uncharacterized protein" ... 123 0.00033 1
UNIPROTKB|J3KQY6 - symbol:DPF1 "Zinc finger protein neuro... 123 0.00033 1
UNIPROTKB|P58268 - symbol:REQ "Zinc finger protein ubi-d4... 123 0.00035 1
UNIPROTKB|H0YCN2 - symbol:RSF1 "Remodeling and spacing fa... 109 0.00036 3
UNIPROTKB|C9J9G2 - symbol:PHF12 "PHD finger protein 12" s... 108 0.00036 3
MGI|MGI:1924057 - symbol:Phf12 "PHD finger protein 12" sp... 111 0.00037 3
UNIPROTKB|I3L6G5 - symbol:DPF1 "Uncharacterized protein" ... 123 0.00037 1
UNIPROTKB|H0YF52 - symbol:TRIM66 "Tripartite motif-contai... 120 0.00038 1
UNIPROTKB|Q9UPN9 - symbol:TRIM33 "E3 ubiquitin-protein li... 128 0.00041 1
FB|FBgn0033636 - symbol:tou "toutatis" species:7227 "Dros... 106 0.00042 3
UNIPROTKB|H7C0U2 - symbol:ZMYND8 "Protein kinase C-bindin... 127 0.00052 1
UNIPROTKB|F1MNE1 - symbol:TRIM33 "Uncharacterized protein... 127 0.00053 1
RGD|1307339 - symbol:Trim33 "tripartite motif-containing ... 127 0.00053 1
UNIPROTKB|H7C2H0 - symbol:CHD3 "Chromodomain-helicase-DNA... 123 0.00053 1
UNIPROTKB|F1MFF9 - symbol:Bt.62145 "Uncharacterized prote... 103 0.00055 3
UNIPROTKB|F1NX04 - symbol:PHF12 "Uncharacterized protein"... 110 0.00057 2
UNIPROTKB|I3LQA6 - symbol:AIRE "Uncharacterized protein" ... 123 0.00059 1
FB|FBgn0023395 - symbol:Chd3 "Chd3" species:7227 "Drosoph... 125 0.00066 1
UNIPROTKB|Q2TAK2 - symbol:PHF12 "PHF12 protein" species:9... 108 0.00068 3
MGI|MGI:2137357 - symbol:Trim33 "tripartite motif-contain... 126 0.00069 1
UNIPROTKB|F1PLN6 - symbol:TRIM33 "Uncharacterized protein... 125 0.00075 1
MGI|MGI:1276545 - symbol:Nsd1 "nuclear receptor-binding S... 136 0.00076 3
RGD|1307748 - symbol:Nsd1 "nuclear receptor binding SET d... 136 0.00077 4
UNIPROTKB|E2QYC0 - symbol:PHF12 "Uncharacterized protein"... 108 0.00086 3
UNIPROTKB|K7EQP5 - symbol:PHF12 "PHD finger protein 12" s... 97 0.00089 1
MGI|MGI:1338803 - symbol:Aire "autoimmune regulator (auto... 121 0.00094 1
>TAIR|locus:2040550 [details] [associations]
symbol:AT2G36720 "AT2G36720" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 HSSP:Q14839 eggNOG:NOG145066 EMBL:AY093116
EMBL:BT008812 IPI:IPI00537974 RefSeq:NP_850270.1 UniGene:At.37517
ProteinModelPortal:Q8RWG0 SMR:Q8RWG0 PaxDb:Q8RWG0 PRIDE:Q8RWG0
EnsemblPlants:AT2G36720.1 GeneID:818244 KEGG:ath:AT2G36720
TAIR:At2g36720 HOGENOM:HOG000149118 InParanoid:Q8RWG0 OMA:DSCPRAF
PhylomeDB:Q8RWG0 ProtClustDB:CLSN2680077 Genevestigator:Q8RWG0
Uniprot:Q8RWG0
Length = 1007
Score = 1226 (436.6 bits), Expect = 3.3e-188, Sum P(3) = 3.3e-188
Identities = 222/357 (62%), Positives = 285/357 (79%)
Query: 557 ADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSG 616
ADGGNLL CD CPRAFH EC SL SIP+G+W+CKYC+N F + +++ N+ G++ G
Sbjct: 622 ADGGNLLLCDSCPRAFHIECVSLPSIPRGNWHCKYCENKFTSEIAGEYNVNSSAVGQLEG 681
Query: 617 VDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKK 676
VD V+Q+ RCIR+VKN+EAE +GC+LC G DF +SGFGPRTI++CDQCE+E+H+GCL
Sbjct: 682 VDPVDQLAGRCIRVVKNMEAETNGCVLCSGSDFCRSGFGPRTIIICDQCEKEYHIGCLSS 741
Query: 677 HKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLNAIK-KYAGNSLETVSD 735
+ DL+ELPKG WFC MDC+RINS LQ LL+ AEKL + L I+ K N + ++SD
Sbjct: 742 QNIVDLKELPKGNWFCSMDCTRINSTLQKLLLGGAEKLSDSSLGIIQTKQERNDVYSISD 801
Query: 736 IDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFG 795
+D+RWRL+SGK +PE+R+LLSQA+AIFHDCFDPIVD +SG +LIP MVYG+ ++GQ++G
Sbjct: 802 LDIRWRLISGKVTSPESRMLLSQALAIFHDCFDPIVDPLSGSNLIPRMVYGKTMQGQDYG 861
Query: 796 GMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRV 855
G+ CA+LTVN++VVSAG+LRVFG+EVAELPLVAT + KGYFQLLF+CIEKLLS L V
Sbjct: 862 GICCAVLTVNATVVSAGLLRVFGREVAELPLVATRMCSREKGYFQLLFSCIEKLLSSLNV 921
Query: 856 KSIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKRCSQLVTFKGTSMLQKRVPACRI 912
+SIV+PAAEEAE +W +KFGF+K+ PE LS Y K C Q+V FKG SMLQK V + +I
Sbjct: 922 ESIVVPAAEEAEPLWMNKFGFRKLAPEQLSKYIKICYQMVRFKGASMLQKPVDSHQI 978
Score = 415 (151.1 bits), Expect = 3.3e-188, Sum P(3) = 3.3e-188
Identities = 116/318 (36%), Positives = 162/318 (50%)
Query: 80 NSKIHEGRINKVVKNVLNENGILES-VVE-EENQLVQMTVE--NVIEETVKGKKAPICKE 135
N+ + VV L G+ ES VE + + LV + ++ N +E + I E
Sbjct: 113 NTLVESSSGKVVVIERLVTGGLAESPAVETDSSSLVDVVIDDINFVELLHEAIPVEILSE 172
Query: 136 EPIS-KVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVTQSEGFGNESMSLIE 194
+ +V+ K S +++K K+ + K + + +V + N +E
Sbjct: 173 GSLDFEVKRLGTKVRTMGKSYSVSEK--KKHGSFKRTAQIYKSIVRMKK-VNNLVPENVE 229
Query: 195 VEAIAE-G-SALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGGIKFQA 252
V A + G L ++ L K I + +P TV +LFETGLLDG+SVVYMG +K QA
Sbjct: 230 VLAEPDFGREGLDEQSHSVSLA-DKSILIRSRPETVRDLFETGLLDGLSVVYMGTVKSQA 288
Query: 253 SXXXXXXXXXXXXCSCSLCNGCRVIPPSKFEIHACKQYRRASQYICFENGKSLLEVLRAC 312
CSCS C+ VI SKFEIHACKQYRRASQYICFENGKSLL+VL
Sbjct: 289 FPLRGIIRDGGILCSCSSCDWANVISTSKFEIHACKQYRRASQYICFENGKSLLDVLNIS 348
Query: 313 RSVPLPMLKATLQSALSSLPEEKSFACVRCKGTFPITCVGKTGPGPLCNSCVKSKKPQGT 372
R+ PL L+AT+ A+ +EK F C RCKG FP + +G G LC SC + + Q +
Sbjct: 349 RNTPLHALEATILDAVDYASKEKRFTCKRCKGPFPFSSLGHRGF--LCKSCSEVETSQAS 406
Query: 373 MTYTTGIRIRASGPKLVS 390
+ T R S P ++
Sbjct: 407 LAAT---RTSTSAPACIT 421
Score = 222 (83.2 bits), Expect = 3.3e-188, Sum P(3) = 3.3e-188
Identities = 54/125 (43%), Positives = 71/125 (56%)
Query: 442 ELTRNSSRPGLIANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKS 501
++TR + R L+ + S + SSQ + + K K + + K ++ S LS +K
Sbjct: 454 KITRKALRQALVGKAYLSASTNVSSQKKCRSKFKKMLTQHSVTPKALKSVS--LSVSSKK 511
Query: 502 R-WNITPKDQRLHKLVFDESGLPDGTE--------KLLEGYKNGLGIICHCCNSEVSPSQ 552
R + + KDQ LHKLVFD GLP+GTE KLL GYK G GI C+CC EVSPS
Sbjct: 512 RSYRLARKDQGLHKLVFDRGGLPEGTELGYYARGQKLLGGYKMGAGIYCYCCKCEVSPSL 571
Query: 553 FEAHA 557
FEAHA
Sbjct: 572 FEAHA 576
Score = 111 (44.1 bits), Expect = 3.7e-156, Sum P(3) = 3.7e-156
Identities = 36/129 (27%), Positives = 64/129 (49%)
Query: 1 MKRELDYELAGSLDETSTQSLPQAGIQASDCVKAACEN-VRCKRFKVTKVNGFIVYSRVK 59
MK +L E S+ ++ + L G +C +A + CKR K T+VNGFIVY+R +
Sbjct: 1 MKEDLVPESNSSVWQSPVKRLAVDG----ECGEAGDRSRTSCKRIKTTQVNGFIVYTRTR 56
Query: 60 RSRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQMTVEN 119
+++F+ + ED+ + +++ + E + V + + S V E N V+N
Sbjct: 57 KTKFTKLHEQ-EDE--NAGLSNHLEESKPTSGVTSGFGGDMCRSSSVGETNVSGSSCVKN 113
Query: 120 VIEETVKGK 128
+ E+ GK
Sbjct: 114 TLVESSSGK 122
Score = 72 (30.4 bits), Expect = 2.2e-172, Sum P(3) = 2.2e-172
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 454 ANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSR 502
+ ST ++ V SS RKIT+K+ + L+ K + +AS +S K R
Sbjct: 435 SESTSISPVFMSSLGNSTRKITRKALRQALVGKAYLSASTNVSSQKKCR 483
Score = 58 (25.5 bits), Expect = 7.2e-139, Sum P(3) = 7.2e-139
Identities = 36/111 (32%), Positives = 47/111 (42%)
Query: 206 SPK--KNLELKMS-KKIS--LNKKPMTVTEL-FETG-LLDGVSVVYMG-GIKFQASXXXX 257
+PK K++ L +S KK S L +K + +L F+ G L +G + Y G K
Sbjct: 496 TPKALKSVSLSVSSKKRSYRLARKDQGLHKLVFDRGGLPEGTELGYYARGQKLLGGYKMG 555
Query: 258 XXXXXXXXCSCSLCNGCRVIPPSKFEIHACKQYRRASQ-YICFENGKSLLE 307
C C C + PS FE HA RR YI NG SL E
Sbjct: 556 AGIY----CYCCKCE----VSPSLFEAHAGWASRRKPYFYIYTSNGVSLHE 598
>TAIR|locus:2147391 [details] [associations]
symbol:AT5G36740 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 UniGene:At.55161 IPI:IPI00544011
RefSeq:NP_568540.1 UniGene:At.55166 ProteinModelPortal:F4K4H9
SMR:F4K4H9 EnsemblPlants:AT5G36740.1 GeneID:833643
KEGG:ath:AT5G36740 OMA:IDTWTSG Uniprot:F4K4H9
Length = 1179
Score = 220 (82.5 bits), Expect = 1.7e-29, Sum P(5) = 1.7e-29
Identities = 69/233 (29%), Positives = 110/233 (47%)
Query: 691 FCCMDCSRINSVLQNLLVQEAEKLPE-FHLNAIKKYAGNSLETVSDIDVRWRLLSGKAAT 749
FC C + LQ L + LPE F + ++++ S V+D D+ S K A
Sbjct: 753 FCGKYCQELFEELQ-LFIGVKHPLPEGFSWSFLRRFELPS--EVADCDI-----SEKIAY 804
Query: 750 PETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVY--GRNLRGQEFGGMYCAILTVNSS 807
++ A ++ +CF P+VD SG +L+ ++VY G N +F A+L
Sbjct: 805 ---NAKMAVAFSVMDECFSPLVDHRSGVNLLQNIVYNFGSNFHRLDFSSFLTAVLERGDE 861
Query: 808 VVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAE 867
+++ +R+ G ++AE+P + T + +G + L IE L L+V +V+PA E
Sbjct: 862 IIAVASIRIHGNQLAEMPFIGTRYMYRRQGMCRRLMDGIESALGSLKVDKLVIPAVPELI 921
Query: 868 SIWTDKFGFKKI-DPELLSIYRKRCSQLVTFKGTSMLQKRVPACRIGSSSTDS 919
WT FGF + D E +I K + LV F G ML K + +I S S
Sbjct: 922 DTWTSGFGFAPVNDSEKKTI--KNLNLLV-FPGVDMLGKSLVKEKITDSVVSS 971
Score = 136 (52.9 bits), Expect = 1.7e-29, Sum P(5) = 1.7e-29
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 558 DGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMF-ERKRFLQHDANAVEAGRVSG 616
DGG+L+ CDGCP FH+ C + P G WYC C F E+ +H+ + + +
Sbjct: 658 DGGDLICCDGCPSTFHQSCLDIKKFPSGAWYCYNCSCKFCEKDEAAKHETSTLPS----- 712
Query: 617 VDSVEQITKRCIRIVKNLEAELSGCL 642
+ S ++C + + A+ C+
Sbjct: 713 LSSCRLCEEKCSKHYPHTLADHQACI 738
Score = 85 (35.0 bits), Expect = 1.7e-29, Sum P(5) = 1.7e-29
Identities = 47/176 (26%), Positives = 72/176 (40%)
Query: 2 KRELDYELAGSLDETSTQSLPQAGIQASDCVKAACENV-RCKRFKVTKVNGFIVYSRVKR 60
++ D + S+++ S + G + V ENV K K ++ RV R
Sbjct: 7 QKGFDLNVCASIEDFSESDIKAEG-ETDSLVDGNVENVIEIKDKKKVIEREILITRRVLR 65
Query: 61 SRFSNSDDLLEDDVIDKRINSK---IHEGRINKVVKNVLNENGILESVVEEENQLVQMTV 117
S S + DL+ D K + K + G VK + + + +S+V EE +
Sbjct: 66 SG-SVARDLVNSDKHCKAVKRKGNVVSGGSSVDEVKEEVKQECV-KSLVPEEIRGDDFRS 123
Query: 118 ENVIEETVKGKKAPICKEEPISKVECFPRKEGGSEVS--NGLNKKCLKRPSAMKPK 171
E +E K ++ KEE + + PRK G S S NGL C R S K K
Sbjct: 124 EVKVES--KDDRSDDGKEEKVQRKRGRPRKFGMSSQSDDNGLISNCKLRTSLGKKK 177
Score = 79 (32.9 bits), Expect = 1.7e-29, Sum P(5) = 1.7e-29
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 526 TEKLLEGYKNGLGIICHCCNSEVSPSQFEAHADGGN 561
T+ LLEG GI C+CC+ S FE HA GGN
Sbjct: 569 TDILLEGIITKEGIRCNCCDEVFSVLDFEVHA-GGN 603
Score = 78 (32.5 bits), Expect = 1.2e-23, Sum P(5) = 1.2e-23
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 659 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS 697
++ CD C FH CL D+++ P G W+C +CS
Sbjct: 662 LICCDGCPSTFHQSCL------DIKKFPSGAWYC-YNCS 693
Score = 55 (24.4 bits), Expect = 1.6e-18, Sum P(4) = 1.6e-18
Identities = 30/105 (28%), Positives = 38/105 (36%)
Query: 271 CNGC-RVIPPSKFEIHACKQYRRASQYICFENGKSLLEVLR-ACRSVPLPMLKATLQSAL 328
CN C V FE+HA + + + E G SLL+ L + LK
Sbjct: 584 CNCCDEVFSVLDFEVHAGGNRNQPFKSLYLEGGNSLLQCLHESMNKQSESQLKGYHFVDF 643
Query: 329 SSLPEEKSFACVRC-KGTFPITCVGKTGPGPLCNSCVKSKK-PQG 371
S + C C G I C G P SC+ KK P G
Sbjct: 644 GS-GDPNDDTCGICGDGGDLICCDGC--PSTFHQSCLDIKKFPSG 685
Score = 48 (22.0 bits), Expect = 1.2e-20, Sum P(5) = 1.2e-20
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 571 AFHKECASLSSIPQG----DWYC-KYCQNMFE 597
A H+ C + G D +C KYCQ +FE
Sbjct: 732 ADHQACINQDGTVPGERSTDSFCGKYCQELFE 763
Score = 47 (21.6 bits), Expect = 1.0e-16, Sum P(4) = 1.0e-16
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 679 MADLRELPKGKWFCCMDCSRINSVLQNLLVQE 710
M D +P CMDC + + +L+ ++ +E
Sbjct: 549 MIDSTIVPLNGKVQCMDCKKTDILLEGIITKE 580
Score = 40 (19.1 bits), Expect = 5.2e-16, Sum P(4) = 5.2e-16
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 641 CLLCRGCDFSKSGFGPRTILLCDQCEREFHV 671
C+ C+ D G + + C+ C+ F V
Sbjct: 563 CMDCKKTDILLEGIITKEGIRCNCCDEVFSV 593
Score = 38 (18.4 bits), Expect = 1.7e-29, Sum P(5) = 1.7e-29
Identities = 18/92 (19%), Positives = 36/92 (39%)
Query: 443 LTRNSSRPGLIANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSR 502
L+R RP ++ + K +S +R + K+ + K + + K R
Sbjct: 288 LSRLRGRPPKTKETSVSLYIEKGPESNGRRMVRKRGRPPTPQKKRKSGMTDESDWKAKKR 347
Query: 503 WNI--TPKDQRLHK-LVFDESGLPDGTEKLLE 531
+ +P + R + L+ DE + + K E
Sbjct: 348 LKLCESPLESRHNNPLIDDERMIGEQRSKQTE 379
>TAIR|locus:2201021 [details] [associations]
symbol:AT1G05380 "AT1G05380" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IC;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 EMBL:CP002684
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC005106 HSSP:Q14839
IPI:IPI00532257 RefSeq:NP_001117233.1 RefSeq:NP_563736.3
UniGene:At.15326 ProteinModelPortal:Q9ZW00 SMR:Q9ZW00 PRIDE:Q9ZW00
EnsemblPlants:AT1G05380.1 EnsemblPlants:AT1G05380.2 GeneID:837039
KEGG:ath:AT1G05380 TAIR:At1g05380 InParanoid:Q9ZW00 OMA:RIRSSIK
PhylomeDB:Q9ZW00 ProtClustDB:CLSN2699134 Genevestigator:Q9ZW00
Uniprot:Q9ZW00
Length = 1138
Score = 319 (117.4 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 133/493 (26%), Positives = 210/493 (42%)
Query: 441 W-ELTRNSSRPGLIANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLS-F- 497
W EL + S R N+ P S S RK K + T+L+ + +P ++ F
Sbjct: 455 WDELHKKSKRSLYYNNARP--SCGSDSHYLHGRKTKKIGRCTLLVRSSKDKKNPAINGFN 512
Query: 498 PNKSR-----WNITPKDQRLHKLVFDESGLPDGTEKLLEGYKNGLGIICHCCNSEVSPSQ 552
P + W I +L + V + G + +LEG+ GI C CC+ ++ S+
Sbjct: 513 PYSGKRTLLSWLIESGVVQLRQKV--QYMRRRGAKVMLEGWITREGIHCDCCSKILTVSR 570
Query: 553 FEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYC-KYCQNMFERKRFLQHDANAVEA 611
FE HA + C + + ASL W K N+ + D +A
Sbjct: 571 FEIHAGSKS---CQPFQNIYLESGASLLQCQVRAWNMQKDATNLALHQVDTDGDDPNDDA 627
Query: 612 GRVSGVDSVEQIT---------KRCI--RIVKNLEAELSGCLLCRGCDFSKSGFGPR--- 657
+ G D + I + C+ +++ + + C C+ CD + + G
Sbjct: 628 CGICG-DGGDLICCDGCPSTYHQNCLGMQVLPSGDWHCPNCT-CKFCDAAVASGGKDGNF 685
Query: 658 -TILLCDQCEREFHVGCL--KKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEKL 714
++L C CER +H CL + HK+ + FC C + LQ L + E
Sbjct: 686 ISLLSCGMCERRYHQLCLNDEAHKV---QSFGSASSFCGPKCLELFEKLQKYLGVKTEIE 742
Query: 715 PEFHLNAIKKYAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSI 774
+ + I + ++T SD + + A E L+ +AI +CF PIVD
Sbjct: 743 GGYSWSLIHR-----VDTDSDTNSQM-----SAQRIENNSKLAVGLAIMDECFLPIVDRR 792
Query: 775 SGRDLIPSMVY--GRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKI 832
SG DLI +++Y G N + G Y AIL ++SA LR G ++AE+P + T I
Sbjct: 793 SGVDLIRNVLYNCGSNFNRINYTGFYTAILERGDEIISAASLRFHGMQLAEMPFIGTRHI 852
Query: 833 NHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKRCS 892
+G + LF IE + L+V+ +V+PA + WT FGF +D + R +
Sbjct: 853 YRRQGMCRRLFDAIESAMRSLKVEKLVIPAIPDFLHAWTGNFGFTPLDDSVRKEMRS-LN 911
Query: 893 QLVTFKGTSMLQK 905
LV F G MLQK
Sbjct: 912 TLV-FPGIDMLQK 923
>TAIR|locus:2163961 [details] [associations]
symbol:AT5G63900 "AT5G63900" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008080
"N-acetyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016
PROSITE:PS51186 SMART:SM00184 SMART:SM00249 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 EMBL:AB007646
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0008080 HSSP:Q14839 EMBL:AB493810
IPI:IPI00518981 RefSeq:NP_201195.1 UniGene:At.55695
ProteinModelPortal:Q9FMZ9 SMR:Q9FMZ9 EnsemblPlants:AT5G63900.1
GeneID:836510 KEGG:ath:AT5G63900 TAIR:At5g63900 eggNOG:NOG244493
HOGENOM:HOG000152567 InParanoid:Q9FMZ9 OMA:NSKLMAC PhylomeDB:Q9FMZ9
ProtClustDB:CLSN2914816 Genevestigator:Q9FMZ9 Uniprot:Q9FMZ9
Length = 557
Score = 217 (81.4 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 60/206 (29%), Positives = 104/206 (50%)
Query: 720 NAIKKYAGNSLETVSDIDVRWRLL----SGKAATPETRLLLSQAVAIFHDCFDPIVDSIS 775
+A++ G+ + +D D+ W L+ G+ E L AV I H F+P D S
Sbjct: 353 SALENLLGSKIAVGNDGDLVWTLMRAPNEGEHYDDEQISKLESAVEILHQGFEPTNDVFS 412
Query: 776 GRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHG 835
GRDL+ ++Y ++ G G Y ++ + ++ +RV ++V E+PLVAT
Sbjct: 413 GRDLVEELIYRKDRTGVG-RGFYTVLIERKNEPITVAAVRV-DKDVVEIPLVATLSSYRR 470
Query: 836 KGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDP-ELLSIYRKRCSQL 894
G ++L +EK +S + V +VLPAA+E + WT++FGF ++ E L + + +
Sbjct: 471 SGMCRVLMDELEKQMSQMGVCRLVLPAAKEVVTTWTERFGFSVMNSSERLELVKHG---M 527
Query: 895 VTFKGTSMLQKRVPACRIGSSSTDST 920
+ F GT M K + R + S + +
Sbjct: 528 LDFVGTIMCHKFLQKERAENDSAEES 553
Score = 125 (49.1 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 21/35 (60%), Positives = 25/35 (71%)
Query: 559 GGNLLPCDGCPRAFHKECASLSSIPQGD-WYCKYC 592
GG+LL CDGCP AFH C LSS+P+ D W+C C
Sbjct: 265 GGDLLLCDGCPSAFHHACLGLSSLPEEDLWFCPCC 299
Score = 123 (48.4 bits), Expect = 4.0e-23, Sum P(3) = 4.0e-23
Identities = 29/83 (34%), Positives = 42/83 (50%)
Query: 627 CIRIVKNLEAELSGCLLCRGCDFSKSGFGPRT--ILLCDQCEREFHVGCLKKHKMADLRE 684
C+ + E +L C C CD S P ++ C+QC+R FH+ CLK+ D
Sbjct: 282 CLGLSSLPEEDLWFCPCCC-CDICGSMESPANSKLMACEQCQRRFHLTCLKE----DSCI 336
Query: 685 LPKGKWFCCMDCSRINSVLQNLL 707
+ WFC C+R+ S L+NLL
Sbjct: 337 VSSRGWFCSSQCNRVFSALENLL 359
Score = 83 (34.3 bits), Expect = 5.2e-19, Sum P(3) = 5.2e-19
Identities = 24/71 (33%), Positives = 32/71 (45%)
Query: 659 ILLCDQCEREFHVGCLKKHKMADLRELPKGK-WFC---CMD-CSRINSVLQNLLVQEAEK 713
+LLCD C FH CL L LP+ WFC C D C + S + L+ +
Sbjct: 268 LLLCDGCPSAFHHACL------GLSSLPEEDLWFCPCCCCDICGSMESPANSKLMACEQC 321
Query: 714 LPEFHLNAIKK 724
FHL +K+
Sbjct: 322 QRRFHLTCLKE 332
Score = 81 (33.6 bits), Expect = 1.6e-19, Sum P(4) = 1.6e-19
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 541 CHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSS--IPQGDWYCK-YCQNMF 596
C CC ++ S E+ A+ L+ C+ C R FH C S + W+C C +F
Sbjct: 296 CPCCCCDICGSM-ESPANS-KLMACEQCQRRFHLTCLKEDSCIVSSRGWFCSSQCNRVF 352
Score = 59 (25.8 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 675 KKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLNAI-KKYAGNSLETV 733
K++K + PKGKWF + + ++ V Q+ Q+ + +P++ L+ + A S V
Sbjct: 60 KRNKKEQRYKSPKGKWFYSLAKACMSCVDQDSQ-QQLQIVPKYDLSCLPSNIASESSSDV 118
Query: 734 SD 735
S+
Sbjct: 119 SN 120
Score = 54 (24.1 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 20/62 (32%), Positives = 28/62 (45%)
Query: 137 PISKVECFPRK---EGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVTQSEGFGNESMSLI 193
P + C P E S+VSN KK KR +VE ++V T E + S LI
Sbjct: 99 PKYDLSCLPSNIASESSSDVSNQKQKKSKKRG-----RVEDLDVKSTAPEKDNHPSADLI 153
Query: 194 EV 195
++
Sbjct: 154 KI 155
Score = 53 (23.7 bits), Expect = 6.1e-16, Sum P(3) = 6.1e-16
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 266 CSCSLCNGCRVIP-PSKFEIHACKQYRRASQYICFENGKSLL 306
C C C+ C + P+ ++ AC+Q +R C + ++
Sbjct: 296 CPCCCCDICGSMESPANSKLMACEQCQRRFHLTCLKEDSCIV 337
Score = 46 (21.3 bits), Expect = 1.6e-19, Sum P(4) = 1.6e-19
Identities = 17/46 (36%), Positives = 19/46 (41%)
Query: 297 ICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSFACVRC 342
+C G LL C P A L LSSLPEE + C C
Sbjct: 261 VCHWGGDLLL-----CDGCPSAFHHACL--GLSSLPEEDLWFCPCC 299
Score = 46 (21.3 bits), Expect = 3.1e-15, Sum P(3) = 3.1e-15
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 327 ALSSLPEEKSFACVRCKGTFPITCV 351
++ S K AC +C+ F +TC+
Sbjct: 306 SMESPANSKLMACEQCQRRFHLTCL 330
>TAIR|locus:2832118 [details] [associations]
symbol:AT5G36670 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 IPI:IPI00527539 RefSeq:NP_568537.1 UniGene:At.55161
ProteinModelPortal:F4K4G6 SMR:F4K4G6 EnsemblPlants:AT5G36670.1
GeneID:833632 KEGG:ath:AT5G36670 ArrayExpress:F4K4G6 Uniprot:F4K4G6
Length = 1193
Score = 155 (59.6 bits), Expect = 2.0e-22, Sum P(5) = 2.0e-22
Identities = 65/247 (26%), Positives = 110/247 (44%)
Query: 691 FCCMDCSRINSVLQNLLVQEAEKLPE-FHLNAIKKYAGNSLETVSDIDVRWRLLSGKAAT 749
FC C + LQ L + LPE F + ++++ S V+D D+ S K A
Sbjct: 753 FCGKYCQELFEELQ-LFIGVKHPLPEGFSWSFLRRFELPS--EVADCDI-----SEKIAY 804
Query: 750 PETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVY--GRNLRGQEFGGMYCAILTVNSS 807
++ A ++ +CF P+VD SG +L+ ++VY G N +F A+L
Sbjct: 805 ---NAKMAVAFSVMDECFSPLVDHRSGVNLLQNIVYNFGSNFHRLDFSSFLTAVLERGDE 861
Query: 808 VVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLS-----FLRVKSIVL-- 860
+++ +R+ G ++AE+P + T + +G + L IE ++ FL + ++L
Sbjct: 862 IIAVASIRIHGNQLAEMPFIGTRYMYRRQGMCRRLMDGIESFVAYFSQMFLAISEVLLDV 921
Query: 861 ------PAA-EEAESIWTDKFGFKKI-DPELLSIYRKRCSQLVTFKGTSMLQKRVPACRI 912
PA + + FGF + D E +I K + LV F G ML K + +I
Sbjct: 922 WQFCCYPACFGDGPFCFFSGFGFAPVNDSEKKTI--KNLNLLV-FPGVDMLGKSLVKEKI 978
Query: 913 GSSSTDS 919
S S
Sbjct: 979 TDSVVSS 985
Score = 136 (52.9 bits), Expect = 2.0e-22, Sum P(5) = 2.0e-22
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 558 DGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMF-ERKRFLQHDANAVEAGRVSG 616
DGG+L+ CDGCP FH+ C + P G WYC C F E+ +H+ + + +
Sbjct: 658 DGGDLICCDGCPSTFHQSCLDIKKFPSGAWYCYNCSCKFCEKDEAAKHETSTLPS----- 712
Query: 617 VDSVEQITKRCIRIVKNLEAELSGCL 642
+ S ++C + + A+ C+
Sbjct: 713 LSSCRLCEEKCSKHYPHTLADHQACI 738
Score = 85 (35.0 bits), Expect = 2.0e-22, Sum P(5) = 2.0e-22
Identities = 47/176 (26%), Positives = 72/176 (40%)
Query: 2 KRELDYELAGSLDETSTQSLPQAGIQASDCVKAACENV-RCKRFKVTKVNGFIVYSRVKR 60
++ D + S+++ S + G + V ENV K K ++ RV R
Sbjct: 7 QKGFDLNVCASIEDFSESDIKAEG-ETDSLVDGNVENVIEIKDKKKVIEREILITRRVLR 65
Query: 61 SRFSNSDDLLEDDVIDKRINSK---IHEGRINKVVKNVLNENGILESVVEEENQLVQMTV 117
S S + DL+ D K + K + G VK + + + +S+V EE +
Sbjct: 66 SG-SVARDLVNSDKHCKAVKRKGNVVSGGSSVDEVKEEVKQECV-KSLVPEEIRGDDFRS 123
Query: 118 ENVIEETVKGKKAPICKEEPISKVECFPRKEGGSEVS--NGLNKKCLKRPSAMKPK 171
E +E K ++ KEE + + PRK G S S NGL C R S K K
Sbjct: 124 EVKVES--KDDRSDDGKEEKVQRKRGRPRKFGMSSQSDDNGLISNCKLRTSLGKKK 177
Score = 79 (32.9 bits), Expect = 2.0e-22, Sum P(5) = 2.0e-22
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 526 TEKLLEGYKNGLGIICHCCNSEVSPSQFEAHADGGN 561
T+ LLEG GI C+CC+ S FE HA GGN
Sbjct: 569 TDILLEGIITKEGIRCNCCDEVFSVLDFEVHA-GGN 603
Score = 78 (32.5 bits), Expect = 1.2e-16, Sum P(5) = 1.2e-16
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 659 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS 697
++ CD C FH CL D+++ P G W+C +CS
Sbjct: 662 LICCDGCPSTFHQSCL------DIKKFPSGAWYC-YNCS 693
Score = 55 (24.4 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 30/105 (28%), Positives = 38/105 (36%)
Query: 271 CNGC-RVIPPSKFEIHACKQYRRASQYICFENGKSLLEVLR-ACRSVPLPMLKATLQSAL 328
CN C V FE+HA + + + E G SLL+ L + LK
Sbjct: 584 CNCCDEVFSVLDFEVHAGGNRNQPFKSLYLEGGNSLLQCLHESMNKQSESQLKGYHFVDF 643
Query: 329 SSLPEEKSFACVRC-KGTFPITCVGKTGPGPLCNSCVKSKK-PQG 371
S + C C G I C G P SC+ KK P G
Sbjct: 644 GS-GDPNDDTCGICGDGGDLICCDGC--PSTFHQSCLDIKKFPSG 685
Score = 48 (22.0 bits), Expect = 1.1e-13, Sum P(5) = 1.1e-13
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 571 AFHKECASLSSIPQG----DWYC-KYCQNMFE 597
A H+ C + G D +C KYCQ +FE
Sbjct: 732 ADHQACINQDGTVPGERSTDSFCGKYCQELFE 763
Score = 47 (21.6 bits), Expect = 8.0e-10, Sum P(4) = 8.0e-10
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 679 MADLRELPKGKWFCCMDCSRINSVLQNLLVQE 710
M D +P CMDC + + +L+ ++ +E
Sbjct: 549 MIDSTIVPLNGKVQCMDCKKTDILLEGIITKE 580
Score = 40 (19.1 bits), Expect = 3.9e-09, Sum P(4) = 3.9e-09
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 641 CLLCRGCDFSKSGFGPRTILLCDQCEREFHV 671
C+ C+ D G + + C+ C+ F V
Sbjct: 563 CMDCKKTDILLEGIITKEGIRCNCCDEVFSV 593
Score = 38 (18.4 bits), Expect = 2.0e-22, Sum P(5) = 2.0e-22
Identities = 18/92 (19%), Positives = 36/92 (39%)
Query: 443 LTRNSSRPGLIANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSR 502
L+R RP ++ + K +S +R + K+ + K + + K R
Sbjct: 288 LSRLRGRPPKTKETSVSLYIEKGPESNGRRMVRKRGRPPTPQKKRKSGMTDESDWKAKKR 347
Query: 503 WNI--TPKDQRLHK-LVFDESGLPDGTEKLLE 531
+ +P + R + L+ DE + + K E
Sbjct: 348 LKLCESPLESRHNNPLIDDERMIGEQRSKQTE 379
>TAIR|locus:2178828 [details] [associations]
symbol:AT5G58610 "AT5G58610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0042991
"transcription factor import into nucleus" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 INTERPRO:IPR008395 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Pfam:PF05641 InterPro:IPR014002
SMART:SM00743 IPI:IPI00519073 RefSeq:NP_200669.1 UniGene:At.55614
ProteinModelPortal:F4KGA3 SMR:F4KGA3 EnsemblPlants:AT5G58610.1
GeneID:835975 KEGG:ath:AT5G58610 OMA:RITQDWN Uniprot:F4KGA3
Length = 1065
Score = 202 (76.2 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 43/134 (32%), Positives = 73/134 (54%)
Query: 748 ATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGR--NLRGQEFGGMYCAILTVN 805
A E +LS A+ + H+ F+P+ GRDL +++ R + F G Y +L N
Sbjct: 814 AAAENHCILSVALDVMHELFEPVKRPHGGRDLAEDVIFSRWSKFKRLNFSGFYTVLLERN 873
Query: 806 SSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE 865
+ +VS +R+ G++VAE+P + T + +G ++L +EK+L L V+ +VLPA
Sbjct: 874 NELVSVATVRILGKKVAEMPFIGTRFQHRQRGMCRVLINELEKVLIDLGVERLVLPAVPC 933
Query: 866 AESIWTDKFGFKKI 879
+ W + FGF K+
Sbjct: 934 VLNTWINSFGFTKM 947
Score = 133 (51.9 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 559 GGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYC 592
GG L+ CDGCP AFH C L +P GDW+C+ C
Sbjct: 703 GGKLILCDGCPSAFHANCLGLEDVPDGDWFCQSC 736
Score = 80 (33.2 bits), Expect = 3.8e-16, Sum P(3) = 3.8e-16
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 659 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDC 696
++LCD C FH CL L ++P G WFC C
Sbjct: 706 LILCDGCPSAFHANCL------GLEDVPDGDWFCQSCC 737
Score = 65 (27.9 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 31/110 (28%), Positives = 45/110 (40%)
Query: 268 CSLCNGCRVIPPSKFEIHACKQYRRASQYICFENGKSLLEVL-----RACRSVPLPMLKA 322
CS C RV + FE+HA + I ++G+SLLE + ++ P MLK
Sbjct: 629 CSCCR--RVFTINGFEVHANGASCSGAANIFLDDGRSLLECQVEAYKKRKKAQPPDMLKM 686
Query: 323 TLQSALSSL------PEEKSFACVRCKGTFPITCVG-KTGP-GP-LCNSC 363
L+ + + K C C F C+G + P G C SC
Sbjct: 687 KLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLEDVPDGDWFCQSC 736
Score = 58 (25.5 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 27/98 (27%), Positives = 45/98 (45%)
Query: 272 NGCRVIPPSKFEIHAC--KQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALS 329
+G I P + + +C K ++ ASQ C S+L + RS + KAT S+
Sbjct: 268 SGMLTIAPQEHQF-SCIDKDFKPASQR-C--QSLSVLTSVSGIRSEASDINKATEISSKK 323
Query: 330 SLPEEKSFACVRCKGTF-PITCVGKTGPGPLCNSCVKS 366
S K + G + P C+ K+GP + +S ++S
Sbjct: 324 STAAHKKDILHKKPGIWHPFDCLAKSGPQAV-SSFIRS 360
Score = 55 (24.4 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 19/79 (24%), Positives = 29/79 (36%)
Query: 543 CCNS--EVSPSQFEAHADGGNLLPCDGCPRAFHKECA-------SLSSIPQGDWYC-KYC 592
CC + + +A + C C +H C SL I W+C K C
Sbjct: 737 CCGACGQFFLKTTSTNAKEEKFISCKQCELKYHPSCLRYDGACDSLDKILGEKWFCSKDC 796
Query: 593 QNMFERKRFLQHDANAVEA 611
+ E + DA+ +EA
Sbjct: 797 EESLEPNMY-GDDASKIEA 814
Score = 42 (19.8 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 324 LQSALSSLPEEKSFACVRCKGTFPITCVGKTGPGPLCNSCVK 365
L++ ++ EEK +C +C+ + +C+ G C+S K
Sbjct: 746 LKTTSTNAKEEKFISCKQCELKYHPSCLRYDGA---CDSLDK 784
Score = 40 (19.1 bits), Expect = 9.9e-20, Sum P(3) = 9.9e-20
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 322 ATLQSALSSLPEEKSFACV 340
A L L+ P+E F+C+
Sbjct: 265 ACLSGMLTIAPQEHQFSCI 283
>TAIR|locus:2086395 [details] [associations]
symbol:ROS4 "AT3G14980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA] [GO:0010385
"double-stranded methylated DNA binding" evidence=IPI] [GO:0042393
"histone binding" evidence=IDA] [GO:0043971 "histone H3-K18
acetylation" evidence=IDA] [GO:0043972 "histone H3-K23 acetylation"
evidence=IDA] [GO:0044030 "regulation of DNA methylation"
evidence=IMP] [GO:0044154 "histone H3-K14 acetylation"
evidence=IDA] [GO:0080188 "RNA-directed DNA methylation"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS51186 SMART:SM00184
SMART:SM00249 GO:GO:0009506 GO:GO:0005634 EMBL:CP002686
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0042393 Gene3D:3.30.890.10
GO:GO:0044030 GO:GO:0044154 GO:GO:0004402 GO:GO:0010385
GO:GO:0043971 UniGene:At.53322 UniGene:At.73310 IPI:IPI00540986
RefSeq:NP_188116.1 ProteinModelPortal:F4IXE7 SMR:F4IXE7
PRIDE:F4IXE7 EnsemblPlants:AT3G14980.1 GeneID:820727
KEGG:ath:AT3G14980 OMA:AECNSKL GO:GO:0043972 GO:GO:0080188
Uniprot:F4IXE7
Length = 1189
Score = 284 (105.0 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 108/397 (27%), Positives = 175/397 (44%)
Query: 523 PDGTEKLLEGYKNGLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSI 582
PD + G G++C CCN VS S+F+ HA PC K AS
Sbjct: 642 PDDDTVVKTGLVTKDGVVCTCCNKTVSLSEFKNHAGFNQNCPCLNLFMGSGKPFASCQLE 701
Query: 583 PQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQIT---------KRCIRIVKN 633
Y K +N + ++ D N G V G D E I + C+ +
Sbjct: 702 AWSAEY-KARRNGWRLEKASDDDPNDDSCG-VCG-DGGELICCDNCPSTFHQACLSMQVL 758
Query: 634 LEAE--LSGCLLCRGCDFSKSGFGPRTI-LLCDQCEREFHVGCLKKHKMADLRELPKGKW 690
E S C C C S R+ C QC ++H CL+ ++ R+L +
Sbjct: 759 PEGSWYCSSCT-CWICSELVSDNAERSQDFKCSQCAHKYHGTCLQG--ISKRRKLFPETY 815
Query: 691 FCCMDCSRINSVLQNLLVQEAEKLPEFHLNAIKKYAGNSLETVSDIDVRWRLLSGKAATP 750
FC +C ++ + L + + + +K + + + + R L+ KA
Sbjct: 816 FCGKNCEKVYNGLSSRVGIINPNADGLSWSILKCFQEDGMVHSA------RRLALKA--- 866
Query: 751 ETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVY--GRNLRGQEFGGMYCAILTVNSSV 808
E L+ A++I + F +VD +G D+IP ++Y G +F G Y ++ + +
Sbjct: 867 ECNSKLAVALSIMEESFLSMVDPRTGIDMIPHVLYNWGSTFARLDFDGFYTVVVEKDDVM 926
Query: 809 VSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAES 868
+S +RV G +AE+PLVAT +G ++L A IE++L L+V+ +V+ A
Sbjct: 927 ISVASIRVHGVTIAEMPLVATCSKYRRQGMCRILVAAIEEMLMSLKVEKLVVAALPSLVE 986
Query: 869 IWTDKFGFKKIDPELLSIYRKRCSQLVTFKGTSMLQK 905
WT+ FGFK +D E KR + L+ F GT++L+K
Sbjct: 987 TWTEGFGFKPMDDEERDAL-KRIN-LMVFPGTTLLKK 1021
Score = 56 (24.8 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 31/147 (21%), Positives = 67/147 (45%)
Query: 56 SRVKRSRFSNSDDLLEDDVIDKRINSKIHEGRI-----NKVVKNVLNENGILESVVEEEN 110
++V+ +R SN D L ++D I + S E + + +V +V + N + S +E +
Sbjct: 367 NKVEVARNSNPDKLKKEDTICLNLISGCPESVLTVSEGSHLVHDV-DANQEIHSDLEVQT 425
Query: 111 QLVQMTVENVIE-ETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMK 169
++ V + +E +++ GK+ E+ SK K ++ + +K L R S
Sbjct: 426 KISSQKVSSRLERQSIIGKEISGTHEQEASK-GIVASKLIAEDMHESVMRKNLHRRSKKI 484
Query: 170 PKVEPVEVLVTQSEGFGNESMSLIEVE 196
++P + Q + + S++ E +
Sbjct: 485 SDIKPASL--DQHDSLDSNSLNSFEFQ 509
>TAIR|locus:2168088 [details] [associations]
symbol:AT5G59830 "AT5G59830" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
EMBL:CP002688 IPI:IPI00541231 RefSeq:NP_200791.2 RefSeq:NP_974964.1
UniGene:At.29202 UniGene:At.29203 EnsemblPlants:AT5G59830.1
EnsemblPlants:AT5G59830.2 GeneID:836104 KEGG:ath:AT5G59830
OMA:FQAATRE Uniprot:F4JXC7
Length = 425
Score = 190 (71.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 47/173 (27%), Positives = 81/173 (46%)
Query: 166 SAMKPKVEPVEVLVTQSEGFGNESMSLIEVEAIAEGSALTSPKKNLELKMSKKISLNKKP 225
S ++ + ++++ Q G S ++ + +A+ S + PK E K SKK + P
Sbjct: 232 SYVQDPIGTLDIVYDQETGSSQTSSGVVSEQQVAKPSLGSLPKTKAEAKSSKKEASTSFP 291
Query: 226 MTVTELFETGLLDGVSVVYMGGIKFQASXXXXXXXXXXXXCSCSLCNGCRVIPPSKFEIH 285
V L TG+LDGV V Y + C C C+ +V+ FE H
Sbjct: 292 SNVRSLISTGMLDGVPVKY---VSVSREELRGVIKGSGYLCGCQTCDFTKVLNAYAFERH 348
Query: 286 A-CKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSF 337
A CK + + +I FENGK++ ++++ R+ P +L +Q+ S +K+F
Sbjct: 349 AGCKT-KHPNNHIYFENGKTIYQIVQELRNTPESILFDVIQTVFGSPINQKAF 400
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 102 (41.0 bits), Expect = 7.3e-07, Sum P(4) = 7.3e-07
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 554 EAHADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 593
E GG ++ CD CPRA+H C + P+G W C +C+
Sbjct: 367 EVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 408
Score = 90 (36.7 bits), Expect = 7.3e-07, Sum P(4) = 7.3e-07
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 644 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 701
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 445 CRVC---KDG-GE--LLCCDTCPSSYHIHCLNP----PLPEIPNGEWLCPRCT-CPALKG 493
Query: 702 VLQNLLV 708
+Q +L+
Sbjct: 494 KVQKILI 500
Score = 57 (25.1 bits), Expect = 7.3e-07, Sum P(4) = 7.3e-07
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 197 AIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGG 247
++++GS S + +L+ +KK ++ +T + +ET D V GG
Sbjct: 323 SVSDGSTSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGG 373
Score = 57 (25.1 bits), Expect = 7.3e-07, Sum P(4) = 7.3e-07
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 117 VENVIEET-VKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPV 175
VE+++ T V P+ E PI K + KEG + K + P A KPK + V
Sbjct: 230 VESMVTATEVAPPPPPV--EVPIRKAKT---KEGKGPNARRKPKGSPRVPDAKKPKPKKV 284
Query: 176 EVLVTQSEGFGNE 188
L + GFG++
Sbjct: 285 APLKIKLGGFGSK 297
Score = 50 (22.7 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 48 KVNGFIVYSRVKRSRFSNSDDL-LEDDVIDKRINS-KIHEGRINK 90
K+ GF S+ KRS S DDL +E D D INS + +G ++
Sbjct: 290 KLGGF--GSKRKRSS-SEDDDLDVESDFDDASINSYSVSDGSTSR 331
Score = 47 (21.6 bits), Expect = 6.7e-06, Sum P(4) = 6.7e-06
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 455 NSTPVT--SVHKSSQSQRQRKITKKSKK 480
NS V+ S +SS+S+++ + TKK KK
Sbjct: 320 NSYSVSDGSTSRSSRSRKKLRTTKKKKK 347
Score = 39 (18.8 bits), Expect = 0.00035, Sum P(4) = 0.00035
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 366 SKKPQGTMTYTTGIRIRASGPKLVSRSSENDSM 398
+KKP+ I++ G K SSE+D +
Sbjct: 276 AKKPKPKKVAPLKIKLGGFGSKRKRSSSEDDDL 308
Score = 38 (18.4 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 498 PNKSRWNITPKDQRLHKLVFDESGLPDGTE 527
P K R PK +R K + D SG +G E
Sbjct: 57 PKKPRDPKIPKSKRQKKELGDSSG--EGPE 84
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 102 (41.0 bits), Expect = 7.4e-07, Sum P(4) = 7.4e-07
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 554 EAHADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 593
E GG ++ CD CPRA+H C + P+G W C +C+
Sbjct: 374 EVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 415
Score = 90 (36.7 bits), Expect = 7.4e-07, Sum P(4) = 7.4e-07
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 644 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 701
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 452 CRVC---KDG-GE--LLCCDTCPSSYHIHCLNP----PLPEIPNGEWLCPRCT-CPALKG 500
Query: 702 VLQNLLV 708
+Q +L+
Sbjct: 501 KVQKILI 507
Score = 57 (25.1 bits), Expect = 7.4e-07, Sum P(4) = 7.4e-07
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 197 AIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGG 247
++++GS S + +L+ +KK ++ +T + +ET D V GG
Sbjct: 330 SVSDGSTSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGG 380
Score = 57 (25.1 bits), Expect = 7.4e-07, Sum P(4) = 7.4e-07
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 117 VENVIEET-VKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPV 175
VE+++ T V P+ E PI K + KEG + K + P A KPK + V
Sbjct: 237 VESMVTATEVAPPPPPV--EVPIRKAKT---KEGKGPNARRKPKGSPRVPDAKKPKPKKV 291
Query: 176 EVLVTQSEGFGNE 188
L + GFG++
Sbjct: 292 APLKIKLGGFGSK 304
Score = 50 (22.7 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 48 KVNGFIVYSRVKRSRFSNSDDL-LEDDVIDKRINS-KIHEGRINK 90
K+ GF S+ KRS S DDL +E D D INS + +G ++
Sbjct: 297 KLGGF--GSKRKRSS-SEDDDLDVESDFDDASINSYSVSDGSTSR 338
Score = 47 (21.6 bits), Expect = 6.8e-06, Sum P(4) = 6.8e-06
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 455 NSTPVT--SVHKSSQSQRQRKITKKSKK 480
NS V+ S +SS+S+++ + TKK KK
Sbjct: 327 NSYSVSDGSTSRSSRSRKKLRTTKKKKK 354
Score = 39 (18.8 bits), Expect = 0.00036, Sum P(4) = 0.00036
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 366 SKKPQGTMTYTTGIRIRASGPKLVSRSSENDSM 398
+KKP+ I++ G K SSE+D +
Sbjct: 283 AKKPKPKKVAPLKIKLGGFGSKRKRSSSEDDDL 315
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 102 (41.0 bits), Expect = 7.4e-07, Sum P(4) = 7.4e-07
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 554 EAHADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 593
E GG ++ CD CPRA+H C + P+G W C +C+
Sbjct: 374 EVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 415
Score = 90 (36.7 bits), Expect = 7.4e-07, Sum P(4) = 7.4e-07
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 644 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 701
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 452 CRVC---KDG-GE--LLCCDTCPSSYHIHCLNP----PLPEIPNGEWLCPRCT-CPALKG 500
Query: 702 VLQNLLV 708
+Q +L+
Sbjct: 501 KVQKILI 507
Score = 57 (25.1 bits), Expect = 7.4e-07, Sum P(4) = 7.4e-07
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 197 AIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGG 247
++++GS S + +L+ +KK ++ +T + +ET D V GG
Sbjct: 330 SVSDGSTSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGG 380
Score = 57 (25.1 bits), Expect = 7.4e-07, Sum P(4) = 7.4e-07
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 117 VENVIEET-VKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPV 175
VE+++ T V P+ E PI K + KEG + K + P A KPK + V
Sbjct: 237 VESMVTATEVAPPPPPV--EVPIRKAKT---KEGKGPNARRKPKGSPRVPDAKKPKPKKV 291
Query: 176 EVLVTQSEGFGNE 188
L + GFG++
Sbjct: 292 APLKIKLGGFGSK 304
Score = 50 (22.7 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 48 KVNGFIVYSRVKRSRFSNSDDL-LEDDVIDKRINS-KIHEGRINK 90
K+ GF S+ KRS S DDL +E D D INS + +G ++
Sbjct: 297 KLGGF--GSKRKRSS-SEDDDLDVESDFDDASINSYSVSDGSTSR 338
Score = 47 (21.6 bits), Expect = 6.8e-06, Sum P(4) = 6.8e-06
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 455 NSTPVT--SVHKSSQSQRQRKITKKSKK 480
NS V+ S +SS+S+++ + TKK KK
Sbjct: 327 NSYSVSDGSTSRSSRSRKKLRTTKKKKK 354
Score = 39 (18.8 bits), Expect = 0.00036, Sum P(4) = 0.00036
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 366 SKKPQGTMTYTTGIRIRASGPKLVSRSSENDSM 398
+KKP+ I++ G K SSE+D +
Sbjct: 283 AKKPKPKKVAPLKIKLGGFGSKRKRSSSEDDDL 315
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 102 (41.0 bits), Expect = 7.4e-07, Sum P(4) = 7.4e-07
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 554 EAHADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 593
E GG ++ CD CPRA+H C + P+G W C +C+
Sbjct: 374 EVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 415
Score = 90 (36.7 bits), Expect = 7.4e-07, Sum P(4) = 7.4e-07
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 644 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 701
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 452 CRVC---KDG-GE--LLCCDTCPSSYHIHCLNP----PLPEIPNGEWLCPRCT-CPALKG 500
Query: 702 VLQNLLV 708
+Q +L+
Sbjct: 501 KVQKILI 507
Score = 57 (25.1 bits), Expect = 7.4e-07, Sum P(4) = 7.4e-07
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 197 AIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGG 247
++++GS S + +L+ +KK ++ +T + +ET D V GG
Sbjct: 330 SVSDGSTSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGG 380
Score = 57 (25.1 bits), Expect = 7.4e-07, Sum P(4) = 7.4e-07
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 117 VENVIEET-VKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPV 175
VE+++ T V P+ E PI K + KEG + K + P A KPK + V
Sbjct: 237 VESMVTATEVAPPPPPV--EVPIRKAKT---KEGKGPNARRKPKGSPRVPDAKKPKPKKV 291
Query: 176 EVLVTQSEGFGNE 188
L + GFG++
Sbjct: 292 APLKIKLGGFGSK 304
Score = 50 (22.7 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 48 KVNGFIVYSRVKRSRFSNSDDL-LEDDVIDKRINS-KIHEGRINK 90
K+ GF S+ KRS S DDL +E D D INS + +G ++
Sbjct: 297 KLGGF--GSKRKRSS-SEDDDLDVESDFDDASINSYSVSDGSTSR 338
Score = 47 (21.6 bits), Expect = 6.8e-06, Sum P(4) = 6.8e-06
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 455 NSTPVT--SVHKSSQSQRQRKITKKSKK 480
NS V+ S +SS+S+++ + TKK KK
Sbjct: 327 NSYSVSDGSTSRSSRSRKKLRTTKKKKK 354
Score = 39 (18.8 bits), Expect = 0.00036, Sum P(4) = 0.00036
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 366 SKKPQGTMTYTTGIRIRASGPKLVSRSSENDSM 398
+KKP+ I++ G K SSE+D +
Sbjct: 283 AKKPKPKKVAPLKIKLGGFGSKRKRSSSEDDDL 315
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 102 (41.0 bits), Expect = 7.4e-07, Sum P(4) = 7.4e-07
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 554 EAHADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 593
E GG ++ CD CPRA+H C + P+G W C +C+
Sbjct: 367 EVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 408
Score = 90 (36.7 bits), Expect = 7.4e-07, Sum P(4) = 7.4e-07
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 644 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 701
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 445 CRVC---KDG-GE--LLCCDTCPSSYHIHCLNP----PLPEIPNGEWLCPRCT-CPALKG 493
Query: 702 VLQNLLV 708
+Q +L+
Sbjct: 494 KVQKILI 500
Score = 57 (25.1 bits), Expect = 7.4e-07, Sum P(4) = 7.4e-07
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 197 AIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGG 247
++++GS S + +L+ +KK ++ +T + +ET D V GG
Sbjct: 323 SVSDGSTSRSSRSRKKLRTAKKKKKGEEEVTAVDGYETDHQDYCEVCQQGG 373
Score = 57 (25.1 bits), Expect = 7.4e-07, Sum P(4) = 7.4e-07
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 117 VENVIEET-VKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPV 175
VE+++ T V P+ E PI K + KEG + K + P A KPK + V
Sbjct: 230 VESMVTATEVAPPPPPV--EVPIRKAKT---KEGKGPNARRKPKGSPRVPDAKKPKPKKV 284
Query: 176 EVLVTQSEGFGNE 188
L + GFG++
Sbjct: 285 APLKIKLGGFGSK 297
Score = 50 (22.7 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 48 KVNGFIVYSRVKRSRFSNSDDL-LEDDVIDKRINS-KIHEGRINK 90
K+ GF S+ KRS S DDL +E D D INS + +G ++
Sbjct: 290 KLGGF--GSKRKRSS-SEDDDLDVESDFDDASINSYSVSDGSTSR 331
Score = 39 (18.8 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 366 SKKPQGTMTYTTGIRIRASGPKLVSRSSENDSM 398
+KKP+ I++ G K SSE+D +
Sbjct: 276 AKKPKPKKVAPLKIKLGGFGSKRKRSSSEDDDL 308
Score = 38 (18.4 bits), Expect = 0.00077, Sum P(3) = 0.00077
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 498 PNKSRWNITPKDQRLHKLVFDESGLPDGTE 527
P K R PK +R K + D SG +G E
Sbjct: 57 PKKPRDPKIPKSKRQKKELGDSSG--EGPE 84
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 102 (41.0 bits), Expect = 7.4e-07, Sum P(4) = 7.4e-07
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 554 EAHADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 593
E GG ++ CD CPRA+H C + P+G W C +C+
Sbjct: 367 EVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 408
Score = 90 (36.7 bits), Expect = 7.4e-07, Sum P(4) = 7.4e-07
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 644 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 701
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 445 CRVC---KDG-GE--LLCCDTCPSSYHIHCLNP----PLPEIPNGEWLCPRCT-CPALKG 493
Query: 702 VLQNLLV 708
+Q +L+
Sbjct: 494 KVQKILI 500
Score = 57 (25.1 bits), Expect = 7.4e-07, Sum P(4) = 7.4e-07
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 197 AIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGG 247
++++GS S + +L+ +KK ++ +T + +ET D V GG
Sbjct: 323 SVSDGSTSRSSRSRKKLRTAKKKKKGEEEVTAVDGYETDHQDYCEVCQQGG 373
Score = 57 (25.1 bits), Expect = 7.4e-07, Sum P(4) = 7.4e-07
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 117 VENVIEET-VKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPV 175
VE+++ T V P+ E PI K + KEG + K + P A KPK + V
Sbjct: 230 VESMVTATEVAPPPPPV--EVPIRKAKT---KEGKGPNARRKPKGSPRVPDAKKPKPKKV 284
Query: 176 EVLVTQSEGFGNE 188
L + GFG++
Sbjct: 285 APLKIKLGGFGSK 297
Score = 50 (22.7 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 48 KVNGFIVYSRVKRSRFSNSDDL-LEDDVIDKRINS-KIHEGRINK 90
K+ GF S+ KRS S DDL +E D D INS + +G ++
Sbjct: 290 KLGGF--GSKRKRSS-SEDDDLDVESDFDDASINSYSVSDGSTSR 331
Score = 39 (18.8 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 366 SKKPQGTMTYTTGIRIRASGPKLVSRSSENDSM 398
+KKP+ I++ G K SSE+D +
Sbjct: 276 AKKPKPKKVAPLKIKLGGFGSKRKRSSSEDDDL 308
Score = 38 (18.4 bits), Expect = 0.00077, Sum P(3) = 0.00077
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 498 PNKSRWNITPKDQRLHKLVFDESGLPDGTE 527
P K R PK +R K + D SG +G E
Sbjct: 57 PKKPRDPKIPKSKRQKKELGDSSG--EGPE 84
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 102 (41.0 bits), Expect = 7.7e-07, Sum P(4) = 7.7e-07
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 554 EAHADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 593
E GG ++ CD CPRA+H C + P+G W C +C+
Sbjct: 394 EVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 435
Score = 90 (36.7 bits), Expect = 7.7e-07, Sum P(4) = 7.7e-07
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 644 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 701
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 472 CRVC---KDG-GE--LLCCDTCPSSYHIHCLNP----PLPEIPNGEWLCPRCT-CPALKG 520
Query: 702 VLQNLLV 708
+Q +L+
Sbjct: 521 KVQKILI 527
Score = 57 (25.1 bits), Expect = 7.7e-07, Sum P(4) = 7.7e-07
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 197 AIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGG 247
++++GS S + +L+ +KK ++ +T + +ET D V GG
Sbjct: 350 SVSDGSTSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGG 400
Score = 57 (25.1 bits), Expect = 7.7e-07, Sum P(4) = 7.7e-07
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 117 VENVIEET-VKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPV 175
VE+++ T V P+ E PI K + KEG + K + P A KPK + V
Sbjct: 257 VESMVTATEVAPPPPPV--EVPIRKAKT---KEGKGPNARRKPKGSPRVPDAKKPKPKKV 311
Query: 176 EVLVTQSEGFGNE 188
L + GFG++
Sbjct: 312 APLKIKLGGFGSK 324
Score = 50 (22.7 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 48 KVNGFIVYSRVKRSRFSNSDDL-LEDDVIDKRINS-KIHEGRINK 90
K+ GF S+ KRS S DDL +E D D INS + +G ++
Sbjct: 317 KLGGF--GSKRKRSS-SEDDDLDVESDFDDASINSYSVSDGSTSR 358
Score = 47 (21.6 bits), Expect = 7.1e-06, Sum P(4) = 7.1e-06
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 455 NSTPVT--SVHKSSQSQRQRKITKKSKK 480
NS V+ S +SS+S+++ + TKK KK
Sbjct: 347 NSYSVSDGSTSRSSRSRKKLRTTKKKKK 374
Score = 39 (18.8 bits), Expect = 0.00037, Sum P(4) = 0.00037
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 366 SKKPQGTMTYTTGIRIRASGPKLVSRSSENDSM 398
+KKP+ I++ G K SSE+D +
Sbjct: 303 AKKPKPKKVAPLKIKLGGFGSKRKRSSSEDDDL 335
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 102 (41.0 bits), Expect = 7.9e-07, Sum P(4) = 7.9e-07
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 554 EAHADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 593
E GG ++ CD CPRA+H C + P+G W C +C+
Sbjct: 395 EVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 436
Score = 90 (36.7 bits), Expect = 7.9e-07, Sum P(4) = 7.9e-07
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 644 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 701
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 473 CRVC---KDG-GE--LLCCDTCPSSYHIHCLNP----PLPEIPNGEWLCPRCT-CPALKG 521
Query: 702 VLQNLLV 708
+Q +L+
Sbjct: 522 KVQKILI 528
Score = 57 (25.1 bits), Expect = 7.9e-07, Sum P(4) = 7.9e-07
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 197 AIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGG 247
++++GS S + +L+ +KK ++ +T + +ET D V GG
Sbjct: 351 SVSDGSTSRSSRSRKKLRTAKKKKKGEEEVTAVDGYETDHQDYCEVCQQGG 401
Score = 57 (25.1 bits), Expect = 7.9e-07, Sum P(4) = 7.9e-07
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 117 VENVIEET-VKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPV 175
VE+++ T V P+ E PI K + KEG + K + P A KPK + V
Sbjct: 258 VESMVTATEVAPPPPPV--EVPIRKAKT---KEGKGPNARRKPKGSPRVPDAKKPKPKKV 312
Query: 176 EVLVTQSEGFGNE 188
L + GFG++
Sbjct: 313 APLKIKLGGFGSK 325
Score = 50 (22.7 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 48 KVNGFIVYSRVKRSRFSNSDDL-LEDDVIDKRINS-KIHEGRINK 90
K+ GF S+ KRS S DDL +E D D INS + +G ++
Sbjct: 318 KLGGF--GSKRKRSS-SEDDDLDVESDFDDASINSYSVSDGSTSR 359
Score = 39 (18.8 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 366 SKKPQGTMTYTTGIRIRASGPKLVSRSSENDSM 398
+KKP+ I++ G K SSE+D +
Sbjct: 304 AKKPKPKKVAPLKIKLGGFGSKRKRSSSEDDDL 336
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 102 (41.0 bits), Expect = 9.6e-07, Sum P(4) = 9.6e-07
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 554 EAHADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 593
E GG ++ CD CPRA+H C + P+G W C +C+
Sbjct: 396 EVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 437
Score = 90 (36.7 bits), Expect = 9.6e-07, Sum P(4) = 9.6e-07
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 644 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 701
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 474 CRVC---KDG-GE--LLCCDTCPSSYHIHCLNP----PLPEIPNGEWLCPRCT-CPALKG 522
Query: 702 VLQNLLV 708
+Q +L+
Sbjct: 523 KVQKILI 529
Score = 57 (25.1 bits), Expect = 9.6e-07, Sum P(4) = 9.6e-07
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 197 AIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGG 247
++++GS S + +L+ +KK ++ +T + +ET D V GG
Sbjct: 352 SVSDGSTSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGG 402
Score = 56 (24.8 bits), Expect = 9.6e-07, Sum P(4) = 9.6e-07
Identities = 26/75 (34%), Positives = 35/75 (46%)
Query: 117 VENVIEET-VKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNK-KCLKR-PSAMKPKVE 173
VE+++ T V P+ E PI K + KEG N K K R P A KPK +
Sbjct: 257 VESMVTATEVAPPPPPV--EVPIRKAKT---KEGKDLGPNARRKPKGSPRVPDAKKPKPK 311
Query: 174 PVEVLVTQSEGFGNE 188
V L + GFG++
Sbjct: 312 KVAPLKIKLGGFGSK 326
Score = 50 (22.7 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 48 KVNGFIVYSRVKRSRFSNSDDL-LEDDVIDKRINS-KIHEGRINK 90
K+ GF S+ KRS S DDL +E D D INS + +G ++
Sbjct: 319 KLGGF--GSKRKRSS-SEDDDLDVESDFDDASINSYSVSDGSTSR 360
Score = 47 (21.6 bits), Expect = 8.9e-06, Sum P(4) = 8.9e-06
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 455 NSTPVT--SVHKSSQSQRQRKITKKSKK 480
NS V+ S +SS+S+++ + TKK KK
Sbjct: 349 NSYSVSDGSTSRSSRSRKKLRTTKKKKK 376
Score = 39 (18.8 bits), Expect = 0.00038, Sum P(4) = 0.00038
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 366 SKKPQGTMTYTTGIRIRASGPKLVSRSSENDSM 398
+KKP+ I++ G K SSE+D +
Sbjct: 305 AKKPKPKKVAPLKIKLGGFGSKRKRSSSEDDDL 337
>TAIR|locus:2173179 [details] [associations]
symbol:AT5G13660 "AT5G13660" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 EMBL:AB006704 eggNOG:NOG12793
UniGene:At.32033 UniGene:At.66715 IPI:IPI00892118
RefSeq:NP_001119218.1 EnsemblPlants:AT5G13660.2 GeneID:831211
KEGG:ath:AT5G13660 TAIR:At5g13660 HOGENOM:HOG000064604 OMA:EQHANCK
PhylomeDB:B3H544 ProtClustDB:CLSN2702252 Genevestigator:B3H544
Uniprot:B3H544
Length = 537
Score = 145 (56.1 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 42/135 (31%), Positives = 63/135 (46%)
Query: 204 LTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGGIKFQASXXXXXXXXXX 263
L PK + K +KK S N P V L TG+ DGV+V Y + Q +
Sbjct: 379 LLVPKIK-DTKTAKKGSTNTFPSNVKSLLSTGIFDGVTVKYYSWSREQRNLKGMIKGTGY 437
Query: 264 XXCSCSLCNGCRVIPPSKFEIHA-CKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKA 322
C C C +V+ +FE HA CK + + +I FENGK++ V++ ++ P L
Sbjct: 438 L-CGCGNCKLNKVLNAYEFEQHANCKT-KHPNNHIYFENGKTIYGVVQELKNTPQEKLFD 495
Query: 323 TLQSALSSLPEEKSF 337
+Q+ S K+F
Sbjct: 496 AIQNVTGSDINHKNF 510
>ZFIN|ZDB-GENE-071008-4 [details] [associations]
symbol:aire "autoimmune regulator" species:7955
"Danio rerio" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006959
"humoral immune response" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-071008-4 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 GeneTree:ENSGT00440000034278 EMBL:BX649390
IPI:IPI00876716 Ensembl:ENSDART00000079317 Bgee:F1Q623
Uniprot:F1Q623
Length = 513
Score = 144 (55.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 29/64 (45%), Positives = 36/64 (56%)
Query: 558 DGGNLLPCDGCPRAFHKECA--SLSSIPQGDWYCKYCQ-NMFERKRFLQHDANAVEAGRV 614
DGG L+ CDGCPRAFH C L+SIP+G W C+ CQ N + + + A E
Sbjct: 302 DGGELICCDGCPRAFHLSCLVPPLTSIPRGTWRCQLCQSNRLKDRTYTHVQPPATETSSG 361
Query: 615 SGVD 618
S VD
Sbjct: 362 SAVD 365
>MGI|MGI:109529 [details] [associations]
symbol:Dpf2 "D4, zinc and double PHD fingers family 2"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 MGI:MGI:109529
GO:GO:0005634 GO:GO:0005737 GO:GO:0005813 GO:GO:0006915
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 HOVERGEN:HBG004475
InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
GeneTree:ENSGT00530000063194 CTD:5977 KO:K13196 ChiTaRS:DPF2
EMBL:U43921 EMBL:AF108134 EMBL:AK004812 EMBL:AK138047 EMBL:AK144106
EMBL:AK144848 EMBL:AK144954 EMBL:BC007188 EMBL:BC012709 EMBL:U10435
IPI:IPI00117727 RefSeq:NP_035392.1 UniGene:Mm.2651
ProteinModelPortal:Q61103 SMR:Q61103 DIP:DIP-59247N IntAct:Q61103
STRING:Q61103 PhosphoSite:Q61103 PaxDb:Q61103 PRIDE:Q61103
Ensembl:ENSMUST00000136983 GeneID:19708 KEGG:mmu:19708
UCSC:uc008gfw.2 NextBio:297086 Bgee:Q61103 CleanEx:MM_DPF2
Genevestigator:Q61103 GermOnline:ENSMUSG00000024826 Uniprot:Q61103
Length = 391
Score = 139 (54.0 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 56/249 (22%), Positives = 100/249 (40%)
Query: 465 SSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSRWN-ITPKDQRLHKLVFDESGLP 523
S+ R+R I L + +E +P KS+ ++ ++L + ++ P
Sbjct: 149 SNSRARKRIIEPDDFLDDLDDEDYEEDTPKRRGKGKSKSKGVSSARKKLDASILEDRDKP 208
Query: 524 DGTEKLLEGYKNGLGIICHCCNSEVSPSQFEAHADGGNLLPCDG-CPRAFHKECASLSSI 582
+ + YKN G+ H +S ++ + E D P K+ ++
Sbjct: 209 YACDICGKRYKNRPGLSYHYAHSHLAEEEGEDKEDSRPPTPVSQRSEEQKSKKGPDGLAL 268
Query: 583 PQGDWYCKYC--QNMFERKRFLQHD-ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELS 639
P YC +C + +K + + + GR SG S Q T + VK +
Sbjct: 269 PNN--YCDFCLGDSKINKKTGQPEELVSCSDCGR-SGHPSCLQFTPVMMAAVKTYRWQ-- 323
Query: 640 GCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCS 697
C+ C+ C+ + +L CD C+R +H+ CL + E P+G W C C+D
Sbjct: 324 -CIECKCCNLCGTSENDDQLLFCDDCDRGYHMYCLTP----SMSEPPEGSWSCHLCLDLL 378
Query: 698 RIN-SVLQN 705
+ S+ QN
Sbjct: 379 KEKASIYQN 387
>RGD|1311699 [details] [associations]
symbol:Dpf2 "D4, zinc and double PHD fingers family 2"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00184 SMART:SM00249
SMART:SM00355 RGD:1311699 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 EMBL:CH473953 CTD:5977 KO:K13196
RefSeq:NP_001101986.1 UniGene:Rn.17281 PRIDE:G3V8U3
Ensembl:ENSRNOT00000028363 GeneID:361711 KEGG:rno:361711
NextBio:677357 Uniprot:G3V8U3
Length = 391
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 52/231 (22%), Positives = 94/231 (40%)
Query: 483 LISKPFENASPPLSFPNKSRWN-ITPKDQRLHKLVFDESGLPDGTEKLLEGYKNGLGIIC 541
L + +E +P KS+ ++ ++L + ++ P + + YKN G+
Sbjct: 167 LDDEDYEEDTPKRRGKGKSKSKGVSSARKKLDASILEDRDKPYACDICGKRYKNRPGLSY 226
Query: 542 HCCNSEVSPSQFEAHADGGNLLPCDG-CPRAFHKECASLSSIPQGDWYCKYC--QNMFER 598
H +S ++ + E D P K+ ++P YC +C + +
Sbjct: 227 HYAHSHLAEEEGEDKEDSQPPTPVSQRSEEQKSKKGPDGLALPNN--YCDFCLGDSKINK 284
Query: 599 KRFLQHD-ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPR 657
K + + + GR SG S Q T + VK + C+ C+ C+ +
Sbjct: 285 KTGQPEELVSCSDCGR-SGHPSCLQFTPVMMAAVKTYRWQ---CIECKCCNLCGTSENDD 340
Query: 658 TILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRIN-SVLQN 705
+L CD C+R +H+ CL + E P+G W C C+D + S+ QN
Sbjct: 341 QLLFCDDCDRGYHMYCLTP----SMSEPPEGSWSCHLCLDLLKEKASIYQN 387
>UNIPROTKB|E2R3L8 [details] [associations]
symbol:DPF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR025750 Pfam:PF14051 GeneTree:ENSGT00530000063194
CTD:5977 KO:K13196 EMBL:AAEX03011641 RefSeq:XP_866588.1
ProteinModelPortal:E2R3L8 Ensembl:ENSCAFT00000021663 GeneID:483743
KEGG:cfa:483743 Uniprot:E2R3L8
Length = 391
Score = 134 (52.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 52/231 (22%), Positives = 93/231 (40%)
Query: 483 LISKPFENASPPLSFPNKSRWN-ITPKDQRLHKLVFDESGLPDGTEKLLEGYKNGLGIIC 541
L + +E +P KS+ + ++L + ++ P + + YKN G+
Sbjct: 167 LDDEDYEEDTPKRRGKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSY 226
Query: 542 HCCNSEVSPSQFEAHADGGNLLPCDG-CPRAFHKECASLSSIPQGDWYCKYC--QNMFER 598
H +S ++ + E D P K+ ++P YC +C + +
Sbjct: 227 HYAHSHLAEEEGEDKEDSQPPTPVSQRSEEQKSKKGPDGLALPNN--YCDFCLGDSKINK 284
Query: 599 KRFLQHD-ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPR 657
K + + + GR SG S Q T + VK + C+ C+ C+ +
Sbjct: 285 KTGQPEELVSCSDCGR-SGHPSCLQFTPVMMAAVKTYRWQ---CIECKCCNICGTSENDD 340
Query: 658 TILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRIN-SVLQN 705
+L CD C+R +H+ CL + E P+G W C C+D + S+ QN
Sbjct: 341 QLLFCDDCDRGYHMYCLTP----SMSEPPEGSWSCHLCLDLLKEKASIYQN 387
>UNIPROTKB|Q92785 [details] [associations]
symbol:DPF2 "Zinc finger protein ubi-d4" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=TAS] [GO:0097190
"apoptotic signaling pathway" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0006917 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 EMBL:CH471076 GO:GO:0097190
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359
HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 CTD:5977 KO:K13196 OrthoDB:EOG41JZD4
EMBL:AF001433 EMBL:U94585 EMBL:BT006718 EMBL:AY220877 EMBL:AK291944
EMBL:BC014889 EMBL:U43920 IPI:IPI00983171 RefSeq:NP_006259.1
UniGene:Hs.13495 PDB:3IUF PDBsum:3IUF ProteinModelPortal:Q92785
SMR:Q92785 DIP:DIP-27575N IntAct:Q92785 MINT:MINT-1160145
STRING:Q92785 PhosphoSite:Q92785 DMDM:2842711 PaxDb:Q92785
PeptideAtlas:Q92785 PRIDE:Q92785 DNASU:5977 Ensembl:ENST00000528416
GeneID:5977 KEGG:hsa:5977 UCSC:uc001odm.3 GeneCards:GC11P065103
HGNC:HGNC:9964 HPA:HPA020880 MIM:601671 neXtProt:NX_Q92785
PharmGKB:PA34331 InParanoid:Q92785 ChiTaRS:DPF2
EvolutionaryTrace:Q92785 GenomeRNAi:5977 NextBio:23263
PMAP-CutDB:Q92785 ArrayExpress:Q92785 Bgee:Q92785 CleanEx:HS_DPF2
Genevestigator:Q92785 GermOnline:ENSG00000133884 Uniprot:Q92785
Length = 391
Score = 134 (52.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 52/231 (22%), Positives = 93/231 (40%)
Query: 483 LISKPFENASPPLSFPNKSRWN-ITPKDQRLHKLVFDESGLPDGTEKLLEGYKNGLGIIC 541
L + +E +P KS+ + ++L + ++ P + + YKN G+
Sbjct: 167 LDDEDYEEDTPKRRGKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSY 226
Query: 542 HCCNSEVSPSQFEAHADGGNLLPCDG-CPRAFHKECASLSSIPQGDWYCKYC--QNMFER 598
H +S ++ + E D P K+ ++P YC +C + +
Sbjct: 227 HYAHSHLAEEEGEDKEDSQPPTPVSQRSEEQKSKKGPDGLALPNN--YCDFCLGDSKINK 284
Query: 599 KRFLQHD-ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPR 657
K + + + GR SG S Q T + VK + C+ C+ C+ +
Sbjct: 285 KTGQPEELVSCSDCGR-SGHPSCLQFTPVMMAAVKTYRWQ---CIECKCCNICGTSENDD 340
Query: 658 TILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRIN-SVLQN 705
+L CD C+R +H+ CL + E P+G W C C+D + S+ QN
Sbjct: 341 QLLFCDDCDRGYHMYCLTP----SMSEPPEGSWSCHLCLDLLKEKASIYQN 387
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 102 (41.0 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 554 EAHADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 593
E GG ++ CD CPRA+H C + P+G W C +C+
Sbjct: 344 EVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 385
Score = 90 (36.7 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 644 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 701
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 422 CRVC---KDG-GE--LLCCDACPSSYHIHCLNP----PLPEIPNGEWLCPRCT-CPALKG 470
Query: 702 VLQNLLV 708
+Q +L+
Sbjct: 471 KVQKILI 477
Score = 52 (23.4 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 197 AIAEGSALTSPKKNLELKMSKKISLNKKPMTVT-ELFETGLLDGVSVVYMGG 247
++++GS S + +LK KK ++ TV + +ET D V GG
Sbjct: 299 SVSDGSTSRSSRSRKKLKAGKKKKKGEEDSTVAVDGYETDHQDYCEVCQQGG 350
Score = 50 (22.7 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 48 KVNGFIVYSRVKRSRFSNSDDL-LEDDVIDKRINS-KIHEGRINK 90
K+ GF S+ KRS S DDL +E D D INS + +G ++
Sbjct: 266 KLGGF--GSKRKRSS-SEDDDLDVESDFDDASINSYSVSDGSTSR 307
Score = 46 (21.3 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 18/70 (25%), Positives = 29/70 (41%)
Query: 120 VIEETVKGKKAPICKEEPIS-KVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVL 178
V+E V A + + P+ + KEG + K + P KPK + V L
Sbjct: 205 VVESMVTNVDA-VLPQPPVDVPLRKAKTKEGKGPNARRKPKGSPRIPDMKKPKTKKVAPL 263
Query: 179 VTQSEGFGNE 188
+ GFG++
Sbjct: 264 KIKLGGFGSK 273
Score = 38 (18.4 bits), Expect = 0.00074, Sum P(3) = 0.00074
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 367 KKPQGTMTYTTGIRIRASGPKLVSRSSENDSM 398
KKP+ I++ G K SSE+D +
Sbjct: 253 KKPKTKKVAPLKIKLGGFGSKRKRSSSEDDDL 284
>UNIPROTKB|A6QQS0 [details] [associations]
symbol:DPF2 "D4, zinc and double PHD fingers family 2"
species:9913 "Bos taurus" [GO:0005813 "centrosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00184 SMART:SM00249
SMART:SM00355 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 HOVERGEN:HBG004475
InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 GeneTree:ENSGT00530000063194 CTD:5977
KO:K13196 OrthoDB:EOG41JZD4 OMA:FPPVKSE EMBL:DAAA02063562
EMBL:BC149969 EMBL:BT030730 IPI:IPI00690122 RefSeq:NP_001093826.1
UniGene:Bt.18954 Ensembl:ENSBTAT00000030078 GeneID:513235
KEGG:bta:513235 InParanoid:A6QQS0 NextBio:20870765 Uniprot:A6QQS0
Length = 391
Score = 133 (51.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 52/231 (22%), Positives = 93/231 (40%)
Query: 483 LISKPFENASPPLSFPNKSRWN-ITPKDQRLHKLVFDESGLPDGTEKLLEGYKNGLGIIC 541
L + +E +P KS+ + ++L + ++ P + + YKN G+
Sbjct: 167 LDDEDYEEDTPKRRGKGKSKSKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSY 226
Query: 542 HCCNSEVSPSQFEAHADGGNLLPCDG-CPRAFHKECASLSSIPQGDWYCKYC--QNMFER 598
H +S ++ + E D P K+ ++P YC +C + +
Sbjct: 227 HYAHSHLAEEEGEDKEDSQPPTPVSQRSEEQKSKKGPDGLALPNN--YCDFCLGDSKINK 284
Query: 599 KRFLQHD-ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPR 657
K + + + GR SG S Q T + VK + C+ C+ C+ +
Sbjct: 285 KTGQPEELVSCSDCGR-SGHPSCLQFTPVMMAAVKTYRWQ---CIECKCCNICGTSENDD 340
Query: 658 TILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRIN-SVLQN 705
+L CD C+R +H+ CL + E P+G W C C+D + S+ QN
Sbjct: 341 QLLFCDDCDRGYHMYCLTP----SMSEPPEGSWSCHLCLDLLKEKASIYQN 387
>UNIPROTKB|Q5TH12 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
GO:GO:0016301 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AL049540
EMBL:AL031666 UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 EMBL:AL390212 IPI:IPI00872983 SMR:Q5TH12
STRING:Q5TH12 Ensembl:ENST00000435836 HOVERGEN:HBG105145
Uniprot:Q5TH12
Length = 175
Score = 113 (44.8 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 560 GNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNM 595
G +L C+ CPR +H +C L+S P+GDW+C C+ +
Sbjct: 73 GQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKI 108
Score = 42 (19.8 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 15/43 (34%), Positives = 17/43 (39%)
Query: 866 AESIWTDKFGFKKIDPELLSIYRKRCSQLVTFKGTSMLQKRVP 908
AE I T + E LS K Q + GT QK VP
Sbjct: 111 AECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVP 153
>UNIPROTKB|F1PXH9 [details] [associations]
symbol:DPF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 OMA:FPPVKSE EMBL:AAEX03011641
ProteinModelPortal:F1PXH9 Ensembl:ENSCAFT00000021664 Uniprot:F1PXH9
Length = 405
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 45/180 (25%), Positives = 74/180 (41%)
Query: 533 YKNGLGIICHCCNSEVSPSQFEAHADGGNLLPCDG-CPRAFHKECASLSSIPQGDWYCKY 591
YKN G+ H +S ++ + E D P K+ ++P YC +
Sbjct: 232 YKNRPGLSYHYAHSHLAEEEGEDKEDSQPPTPVSQRSEEQKSKKGPDGLALPNN--YCDF 289
Query: 592 C--QNMFERKRFLQHD-ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCD 648
C + +K + + + GR SG S Q T + VK + C+ C+ C+
Sbjct: 290 CLGDSKINKKTGQPEELVSCSDCGR-SGHPSCLQFTPVMMAAVKTYRWQ---CIECKCCN 345
Query: 649 FSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRIN-SVLQN 705
+ +L CD C+R +H+ CL + E P+G W C C+D + S+ QN
Sbjct: 346 ICGTSENDDQLLFCDDCDRGYHMYCLTP----SMSEPPEGSWSCHLCLDLLKEKASIYQN 401
>UNIPROTKB|J3KMZ8 [details] [associations]
symbol:DPF2 "Zinc finger protein ubi-d4" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
HGNC:HGNC:9964 ChiTaRS:DPF2 EMBL:AP000944 ProteinModelPortal:J3KMZ8
Ensembl:ENST00000252268 OMA:FPPVKSE Uniprot:J3KMZ8
Length = 405
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 45/180 (25%), Positives = 74/180 (41%)
Query: 533 YKNGLGIICHCCNSEVSPSQFEAHADGGNLLPCDG-CPRAFHKECASLSSIPQGDWYCKY 591
YKN G+ H +S ++ + E D P K+ ++P YC +
Sbjct: 232 YKNRPGLSYHYAHSHLAEEEGEDKEDSQPPTPVSQRSEEQKSKKGPDGLALPNN--YCDF 289
Query: 592 C--QNMFERKRFLQHD-ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCD 648
C + +K + + + GR SG S Q T + VK + C+ C+ C+
Sbjct: 290 CLGDSKINKKTGQPEELVSCSDCGR-SGHPSCLQFTPVMMAAVKTYRWQ---CIECKCCN 345
Query: 649 FSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRIN-SVLQN 705
+ +L CD C+R +H+ CL + E P+G W C C+D + S+ QN
Sbjct: 346 ICGTSENDDQLLFCDDCDRGYHMYCLTP----SMSEPPEGSWSCHLCLDLLKEKASIYQN 401
>UNIPROTKB|F1RRH9 [details] [associations]
symbol:DPF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005813 "centrosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00184 SMART:SM00249 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR025750 Pfam:PF14051 GeneTree:ENSGT00530000063194
OMA:FPPVKSE EMBL:CU856029 Ensembl:ENSSSCT00000014205 Uniprot:F1RRH9
Length = 405
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 45/180 (25%), Positives = 74/180 (41%)
Query: 533 YKNGLGIICHCCNSEVSPSQFEAHADGGNLLPCDG-CPRAFHKECASLSSIPQGDWYCKY 591
YKN G+ H +S ++ + E D P K+ ++P YC +
Sbjct: 232 YKNRPGLSYHYAHSHLAEEEGEDKEDSQPPTPVSQRSEEQKSKKGPDGLALPNN--YCDF 289
Query: 592 C--QNMFERKRFLQHD-ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCD 648
C + +K + + + GR SG S Q T + VK + C+ C+ C+
Sbjct: 290 CLGDSKINKKTGQPEELVSCSDCGR-SGHPSCLQFTPVMMAAVKTYRWQ---CIECKCCN 345
Query: 649 FSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRIN-SVLQN 705
+ +L CD C+R +H+ CL + E P+G W C C+D + S+ QN
Sbjct: 346 ICGTSENDDQLLFCDDCDRGYHMYCLTP----SMSEPPEGSWSCHLCLDLLKEKASIYQN 401
>TAIR|locus:2195945 [details] [associations]
symbol:AT1G77250 "AT1G77250" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:BT025330
IPI:IPI00544228 RefSeq:NP_177849.2 UniGene:At.50042
ProteinModelPortal:Q1JPM3 SMR:Q1JPM3 PaxDb:Q1JPM3 PRIDE:Q1JPM3
EnsemblPlants:AT1G77250.1 GeneID:844061 KEGG:ath:AT1G77250
TAIR:At1g77250 eggNOG:NOG147697 HOGENOM:HOG000090483
InParanoid:Q1JPM3 OMA:CQHAFLN PhylomeDB:Q1JPM3
Genevestigator:Q1JPM3 Uniprot:Q1JPM3
Length = 522
Score = 104 (41.7 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 31/105 (29%), Positives = 50/105 (47%)
Query: 623 ITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADL 682
+T R I++ + S CL CR C K I+LCD C+ +H+ C++
Sbjct: 386 LTSRQIKL-HGVRWYCSSCL-CRNCLTDKDD---DKIVLCDGCDDAYHIYCMRP----PC 436
Query: 683 RELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLNAIKKYAG 727
+P G+WFC C ++L+ VQ+A K E + ++K G
Sbjct: 437 ESVPNGEWFCTA-CKA--AILK---VQKARKAFEKKMETVQKQKG 475
Score = 69 (29.3 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 557 ADGGNLLPCDGCPRAFHKECASLSS--IPQGDWYCKYC 592
A+ + L CD C +H CA +P WYC C
Sbjct: 250 AEARDCLACDHCEDMYHVSCAQPGGKGMPTHSWYCLDC 287
Score = 47 (21.6 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 18/80 (22%), Positives = 31/80 (38%)
Query: 9 LAGSLDETSTQSLPQAGIQASDCVKAACENVRCKRFKVTKVNGFIVYSRVKRSRFSNS-- 66
L G L + + + P + + V A C++V V F +R+
Sbjct: 99 LTGELPKPPSPNKPSSESTNHETVTAGCQHVLSH---VLASKEFASLNRLLSENLQGVKI 155
Query: 67 DDLLEDDVIDKRINSKIHEG 86
DD +ID R+ ++EG
Sbjct: 156 DDFTSRTLIDTRMKEGVYEG 175
>UNIPROTKB|F1NBP6 [details] [associations]
symbol:F1NBP6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0010369 "chromocenter"
evidence=IEA] [GO:0016235 "aggresome" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
Prosite:PS00518 GO:GO:0005634 GO:GO:0045892 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0010369 GeneTree:ENSGT00530000062982
OMA:HMENERA EMBL:AADN02030565 IPI:IPI00595769
Ensembl:ENSGALT00000009581 Uniprot:F1NBP6
Length = 1025
Score = 128 (50.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 47/156 (30%), Positives = 72/156 (46%)
Query: 499 NKSRWNITPKDQRLHKLVFDESGLPDGTEKLLEGYKNGLGIICHC----------CNSEV 548
+KS+WN + K +SGL LLE +G +CH C EV
Sbjct: 733 SKSQWNYSCK----------QSGL-----SLLESSLQVVGSVCHSSASLLPDSNNCEKEV 777
Query: 549 SPSQFEAHA----DGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNMFERKRFL 602
+ + E +GG LL CD CP+ FH C +L S P G+W C C+N + + +
Sbjct: 778 NTIENEDFCAVCLNGGELLCCDHCPKVFHLSCHVPALLSFPVGEWVCTLCRNPMKPE--V 835
Query: 603 QHDA-NAVEAGRVS---GVDSVEQITKRCIRIVKNL 634
++D N A + G+D +Q K+C ++V +L
Sbjct: 836 EYDCENTRYAHSYNAQYGLDDYDQ--KKCEKLVLSL 869
Score = 56 (24.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 46 VTKVNGFIVYSRVKRSRFSNSDDLLEDDVIDKRINSKIHEGR---INKVVK--NVLNENG 100
VTKV S ++ S D LLE + KR+ ++I + IN++ K N+L E
Sbjct: 209 VTKVEE--KKSGIQVSAKQIEDRLLEVKHLYKRVENQIKMAKMVLINEINKRANILLEQ- 265
Query: 101 ILESVVEEENQLVQMTVENVI 121
LE + E Q ++ ++ V+
Sbjct: 266 -LEKITNERRQKLEQQLQGVV 285
Score = 47 (21.6 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 29/139 (20%), Positives = 51/139 (36%)
Query: 266 CSCSLCNGC--RVIPPSKFEIHACKQYRRAS-QYICFENGKSLLEVLRAC--RSVPLPML 320
C S C C +PP F+ + + + I S L + C R V
Sbjct: 25 CLHSFCKDCLPEEMPPCNFKCPITPGFNSGNVERIGI---LSCLACKQTCFARDVVENCF 81
Query: 321 KATLQSALSSLPEEKSFACVRCKGTFPITCVGKTGPGPLCNSCVKSKKPQGTMTYTTGIR 380
+A S++ +E + +C CK P + + LC++C + + G I
Sbjct: 82 LKDFPTANSAMAKEGNQSCSMCKEKRPAHSLCTSCNKWLCSTCTEEHR-HGKFVRVQLI- 139
Query: 381 IRASGPKLVSRSSENDSMC 399
++ G +SE +C
Sbjct: 140 LKVEGVATEEEASELPLLC 158
>UNIPROTKB|C9JFR1 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 IPI:IPI00031188
HGNC:HGNC:360 ProteinModelPortal:C9JFR1 SMR:C9JFR1 STRING:C9JFR1
Ensembl:ENST00000329347 HOGENOM:HOG000207903 ArrayExpress:C9JFR1
Bgee:C9JFR1 Uniprot:C9JFR1
Length = 244
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 22/37 (59%), Positives = 23/37 (62%)
Query: 558 DGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 592
DGG L+ CDGCPRAFH C S L IP G W C C
Sbjct: 97 DGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 133
>UNIPROTKB|Q96L73 [details] [associations]
symbol:NSD1 "Histone-lysine N-methyltransferase, H3
lysine-36 and H4 lysine-20 specific" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0016571 "histone methylation" evidence=ISS] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=ISS]
[GO:0042799 "histone methyltransferase activity (H4-K20 specific)"
evidence=ISS] [GO:0042974 "retinoic acid receptor binding"
evidence=ISS] [GO:0046965 "retinoid X receptor binding"
evidence=ISS] [GO:0046966 "thyroid hormone receptor binding"
evidence=ISS] [GO:0046975 "histone methyltransferase activity
(H3-K36 specific)" evidence=ISS;IDA] [GO:0050681 "androgen receptor
binding" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0003712
"transcription cofactor activity" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0030331 "estrogen receptor binding"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0010452 "histone H3-K36 methylation" evidence=ISS;IDA]
[GO:0034770 "histone H4-K20 methylation" evidence=ISS]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0003714 GO:GO:0005694
GO:GO:0045893 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0050681 GO:GO:0030331
GO:GO:0046966 eggNOG:COG2940 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GO:GO:0042799 InterPro:IPR000313 PROSITE:PS50812
GO:GO:0016922 GO:GO:0046965 SMART:SM00293 GO:GO:0046975 MIM:130650
Orphanet:3447 Orphanet:821 EMBL:AF380302 EMBL:AY049721
EMBL:AF395588 EMBL:AF322907 IPI:IPI00102107 IPI:IPI00173901
IPI:IPI00332367 RefSeq:NP_071900.2 RefSeq:NP_758859.1
UniGene:Hs.106861 PDB:3OOI PDBsum:3OOI ProteinModelPortal:Q96L73
SMR:Q96L73 DIP:DIP-58517N IntAct:Q96L73 STRING:Q96L73
PhosphoSite:Q96L73 DMDM:32469769 PaxDb:Q96L73 PRIDE:Q96L73
Ensembl:ENST00000347982 Ensembl:ENST00000354179
Ensembl:ENST00000361032 Ensembl:ENST00000439151 GeneID:64324
KEGG:hsa:64324 UCSC:uc003mfr.4 UCSC:uc003mfs.1 UCSC:uc003mft.4
CTD:64324 GeneCards:GC05P176560 HGNC:HGNC:14234 MIM:117550
MIM:277590 MIM:606681 neXtProt:NX_Q96L73 Orphanet:228415
Orphanet:238613 PharmGKB:PA31790 HOGENOM:HOG000113857
HOVERGEN:HBG007518 InParanoid:Q96L73 KO:K15588 OMA:NIDKMRH
OrthoDB:EOG49GKFN PhylomeDB:Q96L73 ChiTaRS:NSD1 GenomeRNAi:64324
NextBio:66241 ArrayExpress:Q96L73 Bgee:Q96L73 CleanEx:HS_NSD1
Genevestigator:Q96L73 GermOnline:ENSG00000165671 Uniprot:Q96L73
Length = 2696
Score = 136 (52.9 bits), Expect = 0.00014, Sum P(5) = 0.00014
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 543 CCNSE-VSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 593
C N E V+ S ++GG+LL CD CP AFH+EC ++ IP+G+WYC C+
Sbjct: 1699 CRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNID-IPEGNWYCNDCK 1749
Score = 54 (24.1 bits), Expect = 0.00014, Sum P(5) = 0.00014
Identities = 18/81 (22%), Positives = 39/81 (48%)
Query: 64 SNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQMTVENVIEE 123
S SD + + + +SK+ + ++VKN +N + + NQL +T++ V++
Sbjct: 1011 SRSDCVTRRNCGRSKPSSKLRDAFSAQMVKNTVNRKALKTERKRKLNQLPSVTLDAVLQG 1070
Query: 124 ------TVKGKKAPICKEEPI 138
+++G KE+P+
Sbjct: 1071 DRERGGSLRGGAEDPSKEDPL 1091
Score = 49 (22.3 bits), Expect = 0.00014, Sum P(5) = 0.00014
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 665 CEREFHVGCLKKHKMADLRELPKGKWFC 692
C + +H CL +L + P GKW C
Sbjct: 2138 CPKVYHADCL------NLTKRPAGKWEC 2159
Score = 46 (21.3 bits), Expect = 0.00014, Sum P(5) = 0.00014
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 341 RCKGTFPITCVGKTG-P-GP-LCNSC 363
+C G F + C+G T P G +CN C
Sbjct: 1561 QCCGAFHLECLGLTEMPRGKFICNEC 1586
Score = 45 (20.9 bits), Expect = 0.00014, Sum P(5) = 0.00014
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 4 ELDYELAGSLDETSTQSLPQAGIQASDCV 32
EL L G L + + LP +G SDCV
Sbjct: 990 ELSASLPGLLSDK--RDLPASGKSRSDCV 1016
Score = 42 (19.8 bits), Expect = 0.00051, Sum P(6) = 0.00051
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 447 SSRPGLIANSTPVTSVHKSSQSQRQRKITKK 477
S RP L + V + + +S+RQRK TKK
Sbjct: 1382 SPRPALESEELLVKTPG-NYESKRQRKPTKK 1411
Score = 39 (18.8 bits), Expect = 0.00051, Sum P(6) = 0.00051
Identities = 10/23 (43%), Positives = 10/23 (43%)
Query: 357 GPLCNSCVKSKKPQGTMTYTTGI 379
GP N C KS G M GI
Sbjct: 1231 GPRLNVCDKSSASIGDMEKEPGI 1253
>MGI|MGI:1352748 [details] [associations]
symbol:Dpf1 "D4, zinc and double PHD fingers family 1"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=ISO;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IDA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
MGI:MGI:1352748 GO:GO:0005737 GO:GO:0007399 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0003676
Gene3D:3.30.160.60 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 CTD:8193 HOVERGEN:HBG004475 InterPro:IPR025750
Pfam:PF14051 eggNOG:NOG271547 HOGENOM:HOG000217918
OrthoDB:EOG4T4CX1 EMBL:U48238 EMBL:U48239 EMBL:AF108133
IPI:IPI00134511 IPI:IPI00227453 IPI:IPI00227454 RefSeq:NP_038902.1
UniGene:Mm.101885 UniGene:Mm.453136 UniGene:Mm.453137
ProteinModelPortal:Q9QX66 SMR:Q9QX66 STRING:Q9QX66
PhosphoSite:Q9QX66 PRIDE:Q9QX66 Ensembl:ENSMUST00000049977
Ensembl:ENSMUST00000065181 GeneID:29861 KEGG:mmu:29861
GeneTree:ENSGT00530000063194 NextBio:307066 Bgee:Q9QX66
CleanEx:MM_DPF1 Genevestigator:Q9QX66 GermOnline:ENSMUSG00000030584
Uniprot:Q9QX66
Length = 387
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 46/181 (25%), Positives = 75/181 (41%)
Query: 533 YKNGLGIICHCCNSEVSPSQFEAHADGGNLLPCD--GCPRAFHKECA---------SLSS 581
YKN G+ H ++ ++ + E H + + LP + F+KE A +
Sbjct: 204 YKNRPGLSYHYTHTHLAEEEGEEHTER-HALPFHRKNNHKQFYKELAWVPEAQRKHTAKK 262
Query: 582 IPQG----DWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAE 637
P G + YC +C ++ + + + GR SG S Q T V+ +
Sbjct: 263 APDGTVIPNGYCDFCLGGSKKTGCPEDLISCADCGR-SGHPSCLQFTVNMTAAVRTYRWQ 321
Query: 638 LSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS 697
C+ C+ C + +L CD C+R +H+ CL MA E P+G W C + C
Sbjct: 322 ---CIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSP-PMA---EPPEGSWSCHL-CL 373
Query: 698 R 698
R
Sbjct: 374 R 374
>ZFIN|ZDB-GENE-041014-190 [details] [associations]
symbol:dpf3 "D4, zinc and double PHD fingers,
family 3" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042393 "histone binding" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;IMP] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0048644 "muscle organ morphogenesis" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA;ISS] [GO:0055008 "cardiac
muscle tissue morphogenesis" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00184 SMART:SM00249
ZFIN:ZDB-GENE-041014-190 GO:GO:0007399 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016514
GO:GO:0055008 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0042393
HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 GeneTree:ENSGT00530000063194 CTD:8110
EMBL:EU245032 EMBL:BX255881 IPI:IPI00488271 RefSeq:NP_001104639.1
UniGene:Dr.81131 ProteinModelPortal:A9LMC0 STRING:A9LMC0
Ensembl:ENSDART00000123387 GeneID:562738 KEGG:dre:562738
InParanoid:Q5RIJ2 OMA:AEVEPRS OrthoDB:EOG49KFR1 NextBio:20884558
Bgee:A9LMC0 Uniprot:A9LMC0
Length = 391
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 42/171 (24%), Positives = 73/171 (42%)
Query: 533 YKNGLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHK-ECASLSSIPQGDWYCKY 591
YKN G+ H ++ ++ + E + + HK + A SI D YC +
Sbjct: 221 YKNRPGLSYHYAHTHLAEEEGEEERET-EIPQSPPVHHENHKPQKAPDGSIIPND-YCDF 278
Query: 592 C--QNMFERKRFLQHD-ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCD 648
C + RK + + + GR SG S Q T ++ V+ + + C+ C+ C
Sbjct: 279 CLGDSGSNRKTGQAEELVSCSDCGR-SGHPSCLQFTDNMMQAVRTYQWQ---CIECKSCS 334
Query: 649 FSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRI 699
+ +L CD C+R +H+ CLK + + P+G W C + C +
Sbjct: 335 LCGTSENDDQLLFCDDCDRGYHMYCLKP----PMTQPPEGSWSCHL-CQNL 380
>UNIPROTKB|J3QQU3 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
ChiTaRS:PHF12 ProteinModelPortal:J3QQU3 Ensembl:ENST00000583524
Uniprot:J3QQU3
Length = 129
Score = 103 (41.3 bits), Expect = 0.00020, P = 0.00020
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 558 DGGNLLPCDGCPRAFHKECAS--LSS--IPQGDWYCKYC 592
+GG+LL CD CP AFH +C + LS +P G+W C C
Sbjct: 64 EGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
>UNIPROTKB|E1BIC4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PRINTS:PR01711
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0003682 GO:GO:0045182 GO:GO:0044212
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 EMBL:DAAA02003438 EMBL:DAAA02003439
IPI:IPI00693894 Ensembl:ENSBTAT00000031852 Uniprot:E1BIC4
Length = 561
Score = 127 (49.8 bits), Expect = 0.00022, P = 0.00022
Identities = 23/37 (62%), Positives = 24/37 (64%)
Query: 558 DGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 592
DGG LL CDGCPRAFH C + LS IP G W C C
Sbjct: 312 DGGELLCCDGCPRAFHLACLTPPLSEIPSGTWRCSNC 348
>UNIPROTKB|E7EN20 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AL390241 EMBL:AL035410 HGNC:HGNC:16290
ChiTaRS:TRIM33 IPI:IPI00748247 ProteinModelPortal:E7EN20 SMR:E7EN20
Ensembl:ENST00000450349 UCSC:uc010owr.2 ArrayExpress:E7EN20
Bgee:E7EN20 Uniprot:E7EN20
Length = 759
Score = 128 (50.1 bits), Expect = 0.00025, P = 0.00025
Identities = 49/192 (25%), Positives = 90/192 (46%)
Query: 470 RQRKITKKSKKTVLISKPFENASPPLS--FPNKSRWNITPKDQRLHKLV---FDESGLPD 524
+Q K + ++S P + +PPLS +S + + K+ +ES
Sbjct: 425 KQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDALASLENHVKIEPADMNESCKQS 484
Query: 525 GTEKLLEGYKNGLGIICHCC--------NSEVSPSQ--FEAHADGGNLLPCDGCPRAFHK 574
G L+ G K+ + + H N + P++ +GG+LL C+ CP+ FH
Sbjct: 485 GLSSLVNG-KSPIRSLMHRSARIGGDGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHL 543
Query: 575 EC--ASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVE---AGRVS-GVDSVEQITKRCI 628
C +L S P GDW C +C+++ K +++D + ++ G+ + G+ V+Q ++C
Sbjct: 544 TCHVPTLLSFPSGDWICTFCRDI--GKPEVEYDCDNLQHSKKGKTAQGLSPVDQ--RKCE 599
Query: 629 RIVKNLEA-ELS 639
R++ L ELS
Sbjct: 600 RLLLYLYCHELS 611
>UNIPROTKB|F1SNJ6 [details] [associations]
symbol:LOC100620590 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] [GO:0071391 "cellular response to estrogen
stimulus" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] [GO:0070562 "regulation of vitamin D receptor
signaling pathway" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0034056 "estrogen response element binding" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005726 "perichromatin
fibrils" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0008285
GO:GO:0042981 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0046777 GO:GO:0003682 GO:GO:0004672 GO:GO:0031647
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071391 GO:GO:0034056 GO:GO:0070562
GO:GO:0005726 EMBL:FP236752 Ensembl:ENSSSCT00000017986
Uniprot:F1SNJ6
Length = 301
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 26/81 (32%), Positives = 46/81 (56%)
Query: 558 DGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNMFERKRFLQHDANAV----EA 611
+GG LL C+ CP+ FH C +L++ P G+W C +C+++ K +++D +A E
Sbjct: 85 NGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFCRDL--SKPEVEYDCDAPSHNSEK 142
Query: 612 GRVSGVDSVEQITKR-CIRIV 631
+ G+ + I KR C R++
Sbjct: 143 KKTEGLVKLTPIDKRKCERLL 163
>ZFIN|ZDB-GENE-030131-5132 [details] [associations]
symbol:dpf2l "D4, zinc and double PHD fingers
family 2, like" species:7955 "Danio rerio" [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00184 SMART:SM00249
SMART:SM00355 ZFIN:ZDB-GENE-030131-5132 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 HOVERGEN:HBG004475
InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 GeneTree:ENSGT00530000063194 EMBL:BX005228
EMBL:BC092130 IPI:IPI00490729 RefSeq:NP_997861.2 UniGene:Dr.75185
STRING:Q58E00 Ensembl:ENSDART00000054243 GeneID:326933
KEGG:dre:326933 CTD:326933 InParanoid:Q58E00 OMA:ERSILMP
OrthoDB:EOG40CHH8 NextBio:20809799 Uniprot:Q58E00
Length = 405
Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
Identities = 54/242 (22%), Positives = 96/242 (39%)
Query: 457 TPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSRWN-ITPKDQRLHKL 515
T S H S R+R + + L + FE +P KS+ + ++L
Sbjct: 152 TSTASSHSGSTRIRKRILEPEDYLDDLDDEDFEEETPKRRSKGKSKGRGVGNGKKKLEAA 211
Query: 516 VF--DESGLPDGTEKLLEGYKNGLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFH 573
++ P + + YKN G+ H +S ++ + E + P
Sbjct: 212 AAAQEDRDKPYACDICGKRYKNRPGLSYHYTHSHLADEEGEDKEEPEIHTPAPPEEPKTP 271
Query: 574 KECASLSSIPQGDWYCKYC---QNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRI 630
K+ + ++P YC +C +M ++ + + + GR SG S Q T +
Sbjct: 272 KKGPNGLALPND--YCDFCLGDSSMNQKTGQSEELVSCSDCGR-SGHPSCLQFTAVMMAA 328
Query: 631 VKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKW 690
VK + C+ C+ C+ + +L CD C+R +H+ CL M+D P+G W
Sbjct: 329 VKTYRWQ---CIECKCCNVCGTSENDDQLLFCDDCDRGYHMYCLSP-PMSDP---PEGSW 381
Query: 691 FC 692
C
Sbjct: 382 SC 383
>TAIR|locus:2162509 [details] [associations]
symbol:AT5G22760 "AT5G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Prosite:PS00018 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 InterPro:IPR018247 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 IPI:IPI00532034 RefSeq:NP_197668.2 UniGene:At.43647
PRIDE:F4KBB1 EnsemblPlants:AT5G22760.1 GeneID:832339
KEGG:ath:AT5G22760 OMA:SHFPSIV Uniprot:F4KBB1
Length = 1566
Score = 106 (42.4 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 18/35 (51%), Positives = 20/35 (57%)
Query: 560 GNLLPCDGCPRAFHKECASLSS--IPQGDWYCKYC 592
G LL CDGCP A+H C + IP G WYC C
Sbjct: 423 GTLLCCDGCPLAYHSRCIGVVKMYIPDGPWYCPEC 457
Score = 78 (32.5 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 33/133 (24%), Positives = 57/133 (42%)
Query: 647 CDFSKSGFGPR-TILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSV--- 702
C K + P T + C C+ +H+ +K + ++P+ F C C RI S
Sbjct: 1245 CWICKLPYNPGLTYIHCTSCDMWYHIEAVKLEES----KIPEVVGFKCCRCRRIRSPDCP 1300
Query: 703 LQNLLVQEAEKLPEFHLNAIKKYAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAI 762
+ ++E +++ + K GN T D D R+ K + P T LS+ +
Sbjct: 1301 YMDPKLKEQKQMKQVFFRRQKHGQGN---TGIDSDSE-RMSEPKDSLPSTPSFLSEDTFV 1356
Query: 763 FHDCFDPIVDSIS 775
D DP++ S+S
Sbjct: 1357 PED--DPLLVSVS 1367
>UNIPROTKB|H0Y612 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AL390241
EMBL:AL035410 HGNC:HGNC:16290 ChiTaRS:TRIM33
ProteinModelPortal:H0Y612 PRIDE:H0Y612 Ensembl:ENST00000448034
Bgee:H0Y612 Uniprot:H0Y612
Length = 888
Score = 128 (50.1 bits), Expect = 0.00031, P = 0.00031
Identities = 49/192 (25%), Positives = 90/192 (46%)
Query: 470 RQRKITKKSKKTVLISKPFENASPPLS--FPNKSRWNITPKDQRLHKLV---FDESGLPD 524
+Q K + ++S P + +PPLS +S + + K+ +ES
Sbjct: 554 KQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDALASLENHVKIEPADMNESCKQS 613
Query: 525 GTEKLLEGYKNGLGIICHCC--------NSEVSPSQ--FEAHADGGNLLPCDGCPRAFHK 574
G L+ G K+ + + H N + P++ +GG+LL C+ CP+ FH
Sbjct: 614 GLSSLVNG-KSPIRSLMHRSARIGGDGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHL 672
Query: 575 EC--ASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVE---AGRVS-GVDSVEQITKRCI 628
C +L S P GDW C +C+++ K +++D + ++ G+ + G+ V+Q ++C
Sbjct: 673 TCHVPTLLSFPSGDWICTFCRDI--GKPEVEYDCDNLQHSKKGKTAQGLSPVDQ--RKCE 728
Query: 629 RIVKNLEA-ELS 639
R++ L ELS
Sbjct: 729 RLLLYLYCHELS 740
>UNIPROTKB|F1MWC1 [details] [associations]
symbol:DPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
Gene3D:3.30.160.60 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 EMBL:DAAA02046989 EMBL:DAAA02046990
EMBL:DAAA02046991 EMBL:DAAA02046992 IPI:IPI01024694
Ensembl:ENSBTAT00000009493 ArrayExpress:F1MWC1 Uniprot:F1MWC1
Length = 387
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 46/181 (25%), Positives = 76/181 (41%)
Query: 533 YKNGLGIICHCCNSEVSPSQFEAHADGGNLLPCD--GCPRAFHKECA---------SLSS 581
YKN G+ H ++ ++ + E +A+ + LP + F+KE A +
Sbjct: 204 YKNRPGLSYHYTHTHLAEEEGEENAER-HALPFHRKNNHKQFYKELAWVPESQRKHTAKK 262
Query: 582 IPQG----DWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAE 637
P G + YC +C ++ + + + GR SG S Q T V+ +
Sbjct: 263 APDGTVIPNGYCDFCLGGSKKTGCPEDLISCADCGR-SGHPSCLQFTVNMTAAVRTYRWQ 321
Query: 638 LSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS 697
C+ C+ C + +L CD C+R +H+ CL MA E P+G W C + C
Sbjct: 322 ---CIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSP-PMA---EPPEGSWSCHL-CL 373
Query: 698 R 698
R
Sbjct: 374 R 374
>UNIPROTKB|F1MED1 [details] [associations]
symbol:DPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0007399 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.160.60 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR025750 Pfam:PF14051 OMA:HAPGQLY
GeneTree:ENSGT00530000063194 EMBL:DAAA02046989 EMBL:DAAA02046990
EMBL:DAAA02046991 EMBL:DAAA02046992 IPI:IPI01024694
Ensembl:ENSBTAT00000054713 ArrayExpress:F1MED1 Uniprot:F1MED1
Length = 388
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 46/181 (25%), Positives = 76/181 (41%)
Query: 533 YKNGLGIICHCCNSEVSPSQFEAHADGGNLLPCD--GCPRAFHKECA---------SLSS 581
YKN G+ H ++ ++ + E +A+ + LP + F+KE A +
Sbjct: 205 YKNRPGLSYHYTHTHLAEEEGEENAER-HALPFHRKNNHKQFYKELAWVPESQRKHTAKK 263
Query: 582 IPQG----DWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAE 637
P G + YC +C ++ + + + GR SG S Q T V+ +
Sbjct: 264 APDGTVIPNGYCDFCLGGSKKTGCPEDLISCADCGR-SGHPSCLQFTVNMTAAVRTYRWQ 322
Query: 638 LSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS 697
C+ C+ C + +L CD C+R +H+ CL MA E P+G W C + C
Sbjct: 323 ---CIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSP-PMA---EPPEGSWSCHL-CL 374
Query: 698 R 698
R
Sbjct: 375 R 375
>UNIPROTKB|J3KQY6 [details] [associations]
symbol:DPF1 "Zinc finger protein neuro-d4" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
Gene3D:3.30.160.60 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
EMBL:AC011479 HGNC:HGNC:20225 ProteinModelPortal:J3KQY6
Ensembl:ENST00000456296 Uniprot:J3KQY6
Length = 388
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 46/181 (25%), Positives = 76/181 (41%)
Query: 533 YKNGLGIICHCCNSEVSPSQFEAHADGGNLLPCD--GCPRAFHKECA---------SLSS 581
YKN G+ H ++ ++ + E +A+ + LP + F+KE A +
Sbjct: 205 YKNRPGLSYHYTHTHLAEEEGEENAER-HALPFHRKNNHKQFYKELAWVPEAQRKHTAKK 263
Query: 582 IPQG----DWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAE 637
P G + YC +C ++ + + + GR SG S Q T V+ +
Sbjct: 264 APDGTVIPNGYCDFCLGGSKKTGCPEDLISCADCGR-SGHPSCLQFTVNMTAAVRTYRWQ 322
Query: 638 LSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS 697
C+ C+ C + +L CD C+R +H+ CL MA E P+G W C + C
Sbjct: 323 ---CIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSP-PMA---EPPEGSWSCHL-CL 374
Query: 698 R 698
R
Sbjct: 375 R 375
>UNIPROTKB|P58268 [details] [associations]
symbol:REQ "Zinc finger protein ubi-d4" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 GO:GO:0005634
GO:GO:0005737 GO:GO:0006915 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359
HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 EMBL:AF362751 IPI:IPI00591152
RefSeq:NP_989662.1 UniGene:Gga.48 ProteinModelPortal:P58268
GeneID:374236 KEGG:gga:374236 CTD:5977 InParanoid:P58268 KO:K13196
OrthoDB:EOG41JZD4 NextBio:20813734 Uniprot:P58268
Length = 405
Score = 123 (48.4 bits), Expect = 0.00035, P = 0.00035
Identities = 44/180 (24%), Positives = 74/180 (41%)
Query: 533 YKNGLGIICHCCNSEVSPSQFEAHADGGNLLPCDG-CPRAFHKECASLSSIPQGDWYCKY 591
YKN G+ H +S ++ + + D P K+ ++P YC +
Sbjct: 232 YKNRPGLSYHYAHSHLAEEEGDDKDDSQPPTPVSQRSEEQKSKKGPDGLALPNN--YCDF 289
Query: 592 C--QNMFERKRFLQHD-ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCD 648
C + +K + + + GR SG S Q T + VK + C+ C+ C+
Sbjct: 290 CLGDSKINKKTGQPEELVSCSDCGR-SGHPSCLQFTPVMMAAVKTYRWQ---CIECKCCN 345
Query: 649 FSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRIN-SVLQN 705
+ +L CD C+R +H+ CL + E P+G W C C+D + S+ QN
Sbjct: 346 ICGTSENDDQLLFCDDCDRGYHMYCLTP----PMSEPPEGSWSCHLCLDLLKEKASIYQN 401
>UNIPROTKB|H0YCN2 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:AP000580
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:AP000609
EMBL:AP002343 HGNC:HGNC:18118 ChiTaRS:RSF1 Ensembl:ENST00000526324
Bgee:H0YCN2 Uniprot:H0YCN2
Length = 803
Score = 109 (43.4 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 29/95 (30%), Positives = 41/95 (43%)
Query: 644 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMD---CSR 698
C+ C P ILLCD C+ +H CL+ M +P G+WFC C C +
Sbjct: 695 CKKCGLPNH---PELILLCDSCDSGYHTACLRPPLMI----IPDGEWFCPPCQHKLLCEK 747
Query: 699 INSVLQNLLVQEAEKLPEFHLNAIKKYAGNSLETV 733
+ LQ+L V +K Y G S+E +
Sbjct: 748 LEEQLQDLDVALKKKERAERRKERLVYVGISIENI 782
Score = 74 (31.1 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 41/147 (27%), Positives = 65/147 (44%)
Query: 89 NKVVKNVLNENGILESVVEEENQLVQMTVENVIEETVKGKKAPICKEEPISKVECFPRKE 148
N+ NVL E + + E+E +LV++ V +E K P +E+ I K E KE
Sbjct: 65 NRSTANVLEETTVKKEK-EDEKELVKLPVIVKLE-----KPLPENEEKKIIKEESDSFKE 118
Query: 149 GGSEVSNGLNKKCLKRPSAMKPKVE-PVEVLVTQSEGFGNESMSLIEVEAIAEGSALTSP 207
+ + K+C P K +E PV + E FG S E I E S T
Sbjct: 119 NVKPIKVEV-KECRADPKDTKSSMEKPVAQEPERIE-FGGNIKSSHE---ITEKS--TEE 171
Query: 208 KKNLELKMSKKISLNKKPMTVTELFET 234
+ L+ KI L K+ + +++ F++
Sbjct: 172 TEKLKNDQQAKIPLKKREIKLSDDFDS 198
Score = 38 (18.4 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 361 NSCVKSKKPQGTMTYTTGIRIR 382
NS V KP+G + +T G R R
Sbjct: 632 NSKVSKVKPKGKVRWT-GSRTR 652
>UNIPROTKB|C9J9G2 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
HOGENOM:HOG000220810 ChiTaRS:PHF12 IPI:IPI00952567
ProteinModelPortal:C9J9G2 STRING:C9J9G2 Ensembl:ENST00000378879
UCSC:uc002hdh.1 ArrayExpress:C9J9G2 Uniprot:C9J9G2
Length = 705
Score = 108 (43.1 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 558 DGGNLLPCDGCPRAFHKECAS--LSS--IPQGDWYCKYCQNMFERKRFLQHDANAVEAGR 613
+GG+LL CD CP AFH +C + LS +P G+W C C RK+ Q E G
Sbjct: 64 EGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT--VRRKKREQKK----ELGH 117
Query: 614 VSGVDSVEQITKR 626
V+G+ V++ KR
Sbjct: 118 VNGL--VDKSGKR 128
Score = 67 (28.6 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 659 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 692
++ CD C FH+ CL+ L +P G+W C
Sbjct: 286 LIQCDYCPLLFHMDCLEP----PLTAMPLGRWMC 315
Score = 44 (20.5 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 892 SQLVTFKGTSMLQKRVPACRIGSSSTDS 919
S + + TS LQ++ +IG TDS
Sbjct: 630 SSCASIENTSTLQRKTVQSQIGPPLTDS 657
>MGI|MGI:1924057 [details] [associations]
symbol:Phf12 "PHD finger protein 12" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=ISO]
[GO:0001222 "transcription corepressor binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=ISO]
[GO:0017053 "transcriptional repressor complex" evidence=ISO]
[GO:0035091 "phosphatidylinositol binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 MGI:MGI:1924057 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 EMBL:AL669840 CTD:57649 eggNOG:NOG145066
HOGENOM:HOG000220810 HOVERGEN:HBG057884 OMA:MSSQAQG
OrthoDB:EOG4VHK63 ChiTaRS:PHF12 EMBL:AL845484 EMBL:BC043080
EMBL:AK129383 IPI:IPI00330525 IPI:IPI00515364 RefSeq:NP_777277.2
UniGene:Mm.274329 ProteinModelPortal:Q5SPL2 SMR:Q5SPL2
DIP:DIP-59633N PhosphoSite:Q5SPL2 PRIDE:Q5SPL2
Ensembl:ENSMUST00000049167 Ensembl:ENSMUST00000108360 GeneID:268448
KEGG:mmu:268448 GeneTree:ENSGT00440000033777 InParanoid:Q5SPL2
NextBio:392291 Bgee:Q5SPL2 CleanEx:MM_PHF12 Genevestigator:Q5SPL2
GermOnline:ENSMUSG00000037791 Uniprot:Q5SPL2
Length = 1003
Score = 111 (44.1 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 29/73 (39%), Positives = 41/73 (56%)
Query: 558 DGGNLLPCDGCPRAFHKECAS--LSS--IPQGDWYCKYCQNMFERKRFLQHDANAVEAGR 613
+GG+LL CD CP AFH +C + LS +P G+W C C RK+ Q E G
Sbjct: 64 EGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT--VRRKKREQKK----ELGH 117
Query: 614 VSGVDSVEQITKR 626
V+G+ V++ +KR
Sbjct: 118 VNGL--VDKSSKR 128
Score = 67 (28.6 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 659 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 692
++ CD C FH+ CL+ L +P G+W C
Sbjct: 286 LIQCDYCPLLFHMDCLEP----PLTAMPLGRWMC 315
Score = 46 (21.3 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 892 SQLVTFKGTSMLQKRVPACRIGSSSTDS 919
S + + TS L ++ +IG SST+S
Sbjct: 629 SSCASIENTSTLHRKTVQSQIGPSSTES 656
>UNIPROTKB|I3L6G5 [details] [associations]
symbol:DPF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0007399 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.160.60 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR025750 Pfam:PF14051 OMA:HAPGQLY
GeneTree:ENSGT00530000063194 EMBL:FP565378
Ensembl:ENSSSCT00000025066 Uniprot:I3L6G5
Length = 417
Score = 123 (48.4 bits), Expect = 0.00037, P = 0.00037
Identities = 46/181 (25%), Positives = 76/181 (41%)
Query: 533 YKNGLGIICHCCNSEVSPSQFEAHADGGNLLPCD--GCPRAFHKECA---------SLSS 581
YKN G+ H ++ ++ + E +A+ + LP + F+KE A +
Sbjct: 234 YKNRPGLSYHYTHTHLAEEEGEENAER-HALPFHRKNNHKQFYKELAWVPEAQRKHTAKK 292
Query: 582 IPQG----DWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAE 637
P G + YC +C ++ + + + GR SG S Q T V+ +
Sbjct: 293 APDGTVIPNGYCDFCLGGSKKTGCPEDLISCADCGR-SGHPSCLQFTVNMTAAVRTYRWQ 351
Query: 638 LSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS 697
C+ C+ C + +L CD C+R +H+ CL MA E P+G W C + C
Sbjct: 352 ---CIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSP-PMA---EPPEGSWSCHL-CL 403
Query: 698 R 698
R
Sbjct: 404 R 404
>UNIPROTKB|H0YF52 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AC091053
EMBL:AC104360 HGNC:HGNC:29005 Ensembl:ENST00000530502
Uniprot:H0YF52
Length = 286
Score = 120 (47.3 bits), Expect = 0.00038, P = 0.00038
Identities = 30/84 (35%), Positives = 49/84 (58%)
Query: 558 DGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNMFERKRFLQHDA-NAV--EAG 612
+GG LL CD CP+ FH C +L S P G+W C C+++ + + +++D NA + G
Sbjct: 110 NGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLCRSLTQPE--MEYDCENACYNQPG 167
Query: 613 -RVS-GVDSVEQITKRCIRIVKNL 634
R S G+ +Q K+C ++V +L
Sbjct: 168 MRASPGLSMYDQ--KKCEKLVLSL 189
>UNIPROTKB|Q9UPN9 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0008270 "zinc ion binding" evidence=NAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0017015
"regulation of transforming growth factor beta receptor signaling
pathway" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030514 "negative regulation of BMP signaling pathway"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070410 "co-SMAD
binding" evidence=IPI] [GO:0070412 "R-SMAD binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] Reactome:REACT_71
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 Pfam:PF13639 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 UniPathway:UPA00143 EMBL:AF119043 Prosite:PS00518
Reactome:REACT_111102 GO:GO:0005654 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0000122 GO:GO:0007179 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004842 GO:GO:0006367
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0030514 GO:GO:0017015
MIM:188550 Orphanet:146 PDB:3U5N PDB:3U5O PDB:3U5P PDBsum:3U5N
PDBsum:3U5O PDBsum:3U5P EMBL:AL390241 HOVERGEN:HBG054599
EMBL:AF220136 EMBL:AF220137 EMBL:AB029036 EMBL:AL035410
EMBL:AJ132948 IPI:IPI00010252 IPI:IPI00221114 RefSeq:NP_056990.3
RefSeq:NP_148980.2 UniGene:Hs.26837 PDB:3U5M PDBsum:3U5M
ProteinModelPortal:Q9UPN9 SMR:Q9UPN9 DIP:DIP-54262N IntAct:Q9UPN9
STRING:Q9UPN9 PhosphoSite:Q9UPN9 DMDM:12643365 PaxDb:Q9UPN9
PRIDE:Q9UPN9 Ensembl:ENST00000358465 Ensembl:ENST00000369543
GeneID:51592 KEGG:hsa:51592 UCSC:uc001eew.3 UCSC:uc001eex.3
CTD:51592 GeneCards:GC01M114935 H-InvDB:HIX0000910 HGNC:HGNC:16290
HPA:HPA004345 MIM:605769 neXtProt:NX_Q9UPN9 PharmGKB:PA38118
InParanoid:Q9UPN9 KO:K08883 OMA:PIRSLMH OrthoDB:EOG4SN1N0
PhylomeDB:Q9UPN9 ChiTaRS:TRIM33 GenomeRNAi:51592 NextBio:55433
PMAP-CutDB:Q9UPN9 ArrayExpress:Q9UPN9 Bgee:Q9UPN9 CleanEx:HS_TRIM33
Genevestigator:Q9UPN9 GermOnline:ENSG00000197323 Uniprot:Q9UPN9
Length = 1127
Score = 128 (50.1 bits), Expect = 0.00041, P = 0.00041
Identities = 49/192 (25%), Positives = 90/192 (46%)
Query: 470 RQRKITKKSKKTVLISKPFENASPPLS--FPNKSRWNITPKDQRLHKLV---FDESGLPD 524
+Q K + ++S P + +PPLS +S + + K+ +ES
Sbjct: 793 KQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDALASLENHVKIEPADMNESCKQS 852
Query: 525 GTEKLLEGYKNGLGIICHCC--------NSEVSPSQ--FEAHADGGNLLPCDGCPRAFHK 574
G L+ G K+ + + H N + P++ +GG+LL C+ CP+ FH
Sbjct: 853 GLSSLVNG-KSPIRSLMHRSARIGGDGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHL 911
Query: 575 EC--ASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVE---AGRVS-GVDSVEQITKRCI 628
C +L S P GDW C +C+++ K +++D + ++ G+ + G+ V+Q ++C
Sbjct: 912 TCHVPTLLSFPSGDWICTFCRDI--GKPEVEYDCDNLQHSKKGKTAQGLSPVDQ--RKCE 967
Query: 629 RIVKNLEA-ELS 639
R++ L ELS
Sbjct: 968 RLLLYLYCHELS 979
>FB|FBgn0033636 [details] [associations]
symbol:tou "toutatis" species:7227 "Drosophila melanogaster"
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0003682
"chromatin binding" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001876 InterPro:IPR001965 InterPro:IPR016177
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01429
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982
SMART:SM00249 SMART:SM00297 SMART:SM00547 EMBL:AE013599
GO:GO:0005634 GO:GO:0007399 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0045944 SUPFAM:SSF54171 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018501
Pfam:PF02791 PROSITE:PS50827 GeneTree:ENSGT00660000095335
Gene3D:3.30.890.10 UniGene:Dm.2658 GeneID:36241
KEGG:dme:Dmel_CG10897 CTD:36241 FlyBase:FBgn0033636
GenomeRNAi:36241 NextBio:797507 RefSeq:NP_001097270.1
ProteinModelPortal:A8DYA3 SMR:A8DYA3 STRING:A8DYA3
EnsemblMetazoa:FBtr0113066 UCSC:CG10897-RE OMA:GRHTTLL
PhylomeDB:A8DYA3 Bgee:A8DYA3 Uniprot:A8DYA3
Length = 3131
Score = 106 (42.4 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 41/152 (26%), Positives = 58/152 (38%)
Query: 455 NSTPVT-SVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSRWNITPKDQRLH 513
N P++ ++ + +Q + + K +L P ASP S PN S D
Sbjct: 2560 NQAPLSIKINLKALAQNGQCLLKTKTPPILTKSP--TASPS-SHPNTS-----DSDSDFG 2611
Query: 514 KLVFDESG---LPDGTEKLLEGYKNGLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPR 570
K +SG Y N L C C S + + LL CDGC +
Sbjct: 2612 KRTKKKSGGKRRRSANNTNSSKYSNSLQN-CQFCTSGENEDK---------LLLCDGCDK 2661
Query: 571 AFHKEC--ASLSSIPQGDWYCKYCQNMFERKR 600
+H C + +IP GDWYC C N +R
Sbjct: 2662 GYHTYCFKPKMDNIPDGDWYCYECVNKATNER 2693
Score = 84 (34.6 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 627 CIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELP 686
C V E C++C G S G ++ CD C R +H C + L ++P
Sbjct: 2682 CYECVNKATNERK-CIVCGGHRPSPVG----KMIYCDLCPRAYHADCY----IPPLLKVP 2732
Query: 687 KGKWFC 692
+GKW+C
Sbjct: 2733 RGKWYC 2738
Score = 49 (22.3 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 182 SEGFGNESMSLIEVEAIAEGSALTSPKKNLELKM-SKKISLNKKPMTVTE-LFETG 235
S G G S S E G ++ PKKN + ++ ++ KPM T+ L + G
Sbjct: 851 SGGSGGGSSSYKEGRPRNLGRGVSKPKKNTVASLLAQSRAVGLKPMLATQQLLQQG 906
>UNIPROTKB|H7C0U2 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
EMBL:CH471077 GO:GO:0046872 GO:GO:0008270 GO:GO:0016301
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666 UniGene:Hs.446240
UniGene:Hs.658553 UniGene:Hs.668465 HGNC:HGNC:9397
InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212 SMR:H7C0U2
Ensembl:ENST00000446994 Uniprot:H7C0U2
Length = 1105
Score = 127 (49.8 bits), Expect = 0.00052, P = 0.00052
Identities = 38/145 (26%), Positives = 67/145 (46%)
Query: 560 GNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ-NMFERKRFL-QHDANAVEAGRVSGV 617
G +L C+ CPR +H +C L+S P+GDW+C C+ + F++ L QH A +
Sbjct: 73 GQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECETDAFQKPVPLEQHPDYAEYIFHPMDL 132
Query: 618 DSVEQITKR----CIR-IVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVG 672
++E+ K+ C + + + L C++ G + + I +C+ E V
Sbjct: 133 CTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEV- 191
Query: 673 CLKKHKMADLRELPKGKWFCCMDCS 697
C + + A + + WFC CS
Sbjct: 192 CPECYLAACQK---RDNWFC-EPCS 212
>UNIPROTKB|F1MNE1 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070412 "R-SMAD binding" evidence=IEA] [GO:0070410
"co-SMAD binding" evidence=IEA] [GO:0030514 "negative regulation of
BMP signaling pathway" evidence=IEA] [GO:0017015 "regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR017907
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0030514 GO:GO:0017015
GeneTree:ENSGT00530000062982 CTD:51592 KO:K08883 OMA:PIRSLMH
EMBL:DAAA02007465 EMBL:DAAA02007466 EMBL:DAAA02007467
IPI:IPI00717094 RefSeq:NP_001192947.1 UniGene:Bt.91873
ProteinModelPortal:F1MNE1 PRIDE:F1MNE1 Ensembl:ENSBTAT00000001967
GeneID:533296 KEGG:bta:533296 NextBio:20875989 Uniprot:F1MNE1
Length = 1126
Score = 127 (49.8 bits), Expect = 0.00053, P = 0.00053
Identities = 51/196 (26%), Positives = 92/196 (46%)
Query: 466 SQSQRQRKITKKSKKTVLISKPFENASPPLS--FPNKSRWN-ITPKDQRLHKLVFD--ES 520
S + +Q K + ++S P + +PPLS +S + +T + + D ES
Sbjct: 788 SGAVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDTLTSLENHVKTEPADMNES 847
Query: 521 GLPDGTEKLLEGYKNGLGIICHCC---NSEVSPSQFEAHAD-------GGNLLPCDGCPR 570
G L+ G K+ + + H + S + + D GG+LL C+ CP+
Sbjct: 848 CKQSGLNSLVNG-KSPVRSLMHRSARIGGDGSSKDDDPNEDWCAVCQNGGDLLCCEKCPK 906
Query: 571 AFHKEC--ASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVE---AGRVS-GVDSVEQIT 624
FH C +L S P GDW C +C+++ K +++D + ++ G+ + G+ V+Q
Sbjct: 907 VFHLTCHVPTLLSFPSGDWICTFCRDI--GKPEVEYDCDNLQHSKKGKTAQGLSPVDQ-- 962
Query: 625 KRCIRIVKNLEA-ELS 639
++C R++ L ELS
Sbjct: 963 RKCERLLLYLYCHELS 978
>RGD|1307339 [details] [associations]
symbol:Trim33 "tripartite motif-containing 33" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0017015 "regulation of transforming growth factor
beta receptor signaling pathway" evidence=ISO] [GO:0030514
"negative regulation of BMP signaling pathway" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0070410 "co-SMAD binding" evidence=ISO]
[GO:0070412 "R-SMAD binding" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 RGD:1307339
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 IPI:IPI00957392
Ensembl:ENSRNOT00000025600 UCSC:RGD:1307339 NextBio:688291
ArrayExpress:D3ZUM5 Uniprot:D3ZUM5
Length = 1127
Score = 127 (49.8 bits), Expect = 0.00053, P = 0.00053
Identities = 52/196 (26%), Positives = 94/196 (47%)
Query: 466 SQSQRQRKITKKSKKTVLISKPFENASPPLS--FPNKSRWN-ITPKDQRLHKLVFD--ES 520
S + +Q K + ++S P + +PPLS +S + +T + + D ES
Sbjct: 806 SGAVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDTLTSLENHVKTEPADISES 865
Query: 521 GLPDGTEKLLEGYKNGLGIICHCC-------NS-EVSPSQ--FEAHADGGNLLPCDGCPR 570
G L+ G K+ + + H NS + P++ +GG+LL C+ CP+
Sbjct: 866 CKQSGLSSLVNG-KSPIRNLMHRSARIGGDGNSKDDDPNEDWCAVCQNGGDLLCCEKCPK 924
Query: 571 AFHKEC--ASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVE---AGRVS-GVDSVEQIT 624
FH C +L S P GDW C +C+++ K +++D + ++ G+ + G+ V+Q
Sbjct: 925 VFHLTCHVPTLLSFPSGDWICTFCRDI--GKPEVEYDCDNMQHSKKGKTAQGLSPVDQ-- 980
Query: 625 KRCIRIVKNLEA-ELS 639
++C R++ L ELS
Sbjct: 981 RKCERLLLYLYCHELS 996
>UNIPROTKB|H7C2H0 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 HGNC:HGNC:1918 ChiTaRS:CHD3 EMBL:AC104581
GO:GO:0016818 Ensembl:ENST00000452447 Uniprot:H7C2H0
Length = 525
Score = 123 (48.4 bits), Expect = 0.00053, P = 0.00053
Identities = 47/157 (29%), Positives = 61/157 (38%)
Query: 516 VFDESGLPDG---TEKLLEGY-----KNGLGIICHCCNSEVSPSQFEA-HAD-------G 559
V SG PDG T+KL G K LG C E +E H D G
Sbjct: 202 VHSASGRPDGPVRTKKLKRGRPGRKKKKVLG--CPAVAGEEEVDGYETDHQDYCEVCQQG 259
Query: 560 GNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGV 617
G ++ CD CPRA+H C L P+G W C +C+ + + + E G G
Sbjct: 260 GEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEEEEYEEEGEEEGE 319
Query: 618 DSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGF 654
E R+ K+ G LLC CD S +
Sbjct: 320 KEEEDDHMEYCRVCKD-----GGELLC--CDACISSY 349
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 103 (41.3 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 554 EAHADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 593
E GG ++ CD CPRA+H C L P+G W C +C+
Sbjct: 292 EVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCE 333
Score = 84 (34.6 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 23/66 (34%), Positives = 31/66 (46%)
Query: 644 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 701
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 364 CRVC---KDG-GE--LLCCDACPSSYHLHCLNP----PLPEIPNGEWLCPRCT-CPPLKG 412
Query: 702 VLQNLL 707
+Q +L
Sbjct: 413 KVQRIL 418
Score = 44 (20.5 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 12/45 (26%), Positives = 18/45 (40%)
Query: 151 SEVSNGLNKKCLKRPSAMKPKVEPVEVLVTQSEGFGNESMSLIEV 195
SE S L KK +R + + P V +G+ + EV
Sbjct: 249 SECSAALGKKSKRRRKKKRNQGSPAHSPVDDGDGYETDHQDYCEV 293
>UNIPROTKB|F1NX04 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0001222 "transcription corepressor binding"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0035091
"phosphatidylinositol binding" evidence=IEA] InterPro:IPR000253
InterPro:IPR001965 InterPro:IPR008984 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016 SMART:SM00240
SMART:SM00249 GO:GO:0017053 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:AADN02025853 IPI:IPI00589363 Ensembl:ENSGALT00000006417
Uniprot:F1NX04
Length = 1007
Score = 110 (43.8 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 29/73 (39%), Positives = 41/73 (56%)
Query: 558 DGGNLLPCDGCPRAFHKECAS--LSS--IPQGDWYCKYCQNMFERKRFLQHDANAVEAGR 613
+GG+LL CD CP AFH +C + LS +P G+W C C RK+ Q E G+
Sbjct: 62 EGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT--VRRKKREQKK----ELGQ 115
Query: 614 VSGVDSVEQITKR 626
V+G+ V++ KR
Sbjct: 116 VNGL--VDKTGKR 126
Score = 67 (28.6 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 659 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 692
++ CD C FH+ CL+ L +P G+W C
Sbjct: 282 LIQCDYCPLLFHMDCLEP----PLTAMPLGRWMC 311
>UNIPROTKB|I3LQA6 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:FP312783 Ensembl:ENSSSCT00000030488 Uniprot:I3LQA6
Length = 564
Score = 123 (48.4 bits), Expect = 0.00059, P = 0.00059
Identities = 22/37 (59%), Positives = 23/37 (62%)
Query: 558 DGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 592
DGG L+ CDGCPRAFH C S L IP G W C C
Sbjct: 312 DGGELICCDGCPRAFHLACLSPPLRDIPSGTWRCSSC 348
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 125 (49.1 bits), Expect = 0.00066, P = 0.00066
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 557 ADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 592
+DGG+LL CD CP +H+ C S L SIP+GDW C C
Sbjct: 42 SDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRC 79
>UNIPROTKB|Q2TAK2 [details] [associations]
symbol:PHF12 "PHF12 protein" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AC024267 UniGene:Hs.444173 HGNC:HGNC:20816
HOVERGEN:HBG057884 ChiTaRS:PHF12 IPI:IPI00952567 EMBL:BC110882
ProteinModelPortal:Q2TAK2 SMR:Q2TAK2 STRING:Q2TAK2
Ensembl:ENST00000577226 UCSC:uc002hdi.1 Bgee:Q2TAK2 Uniprot:Q2TAK2
Length = 849
Score = 108 (43.1 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 558 DGGNLLPCDGCPRAFHKECAS--LSS--IPQGDWYCKYCQNMFERKRFLQHDANAVEAGR 613
+GG+LL CD CP AFH +C + LS +P G+W C C RK+ Q E G
Sbjct: 64 EGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT--VRRKKREQKK----ELGH 117
Query: 614 VSGVDSVEQITKR 626
V+G+ V++ KR
Sbjct: 118 VNGL--VDKSGKR 128
Score = 67 (28.6 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 659 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 692
++ CD C FH+ CL+ L +P G+W C
Sbjct: 286 LIQCDYCPLLFHMDCLEP----PLTAMPLGRWMC 315
Score = 44 (20.5 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 892 SQLVTFKGTSMLQKRVPACRIGSSSTDS 919
S + + TS LQ++ +IG TDS
Sbjct: 630 SSCASIENTSTLQRKTVQSQIGPPLTDS 657
>MGI|MGI:2137357 [details] [associations]
symbol:Trim33 "tripartite motif-containing 33" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0017015 "regulation
of transforming growth factor beta receptor signaling pathway"
evidence=ISO] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070410 "co-SMAD binding" evidence=ISO]
[GO:0070412 "R-SMAD binding" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
UniPathway:UPA00143 MGI:MGI:2137357 Prosite:PS00518 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0070412 InterPro:IPR017907
Gene3D:1.20.920.10 SUPFAM:SSF47370 eggNOG:COG5076 GO:GO:0030514
GO:GO:0017015 GO:GO:0070410 HOGENOM:HOG000252971 HOVERGEN:HBG054599
CTD:51592 KO:K08883 OrthoDB:EOG4SN1N0 EMBL:AY458590 EMBL:AK129293
EMBL:AF220138 IPI:IPI00409904 IPI:IPI00480381 RefSeq:NP_001073299.1
RefSeq:NP_444400.2 UniGene:Mm.195036 ProteinModelPortal:Q99PP7
SMR:Q99PP7 DIP:DIP-59674N IntAct:Q99PP7 STRING:Q99PP7
PhosphoSite:Q99PP7 PaxDb:Q99PP7 PRIDE:Q99PP7 GeneID:94093
KEGG:mmu:94093 UCSC:uc008qsv.1 UCSC:uc008qsw.1 InParanoid:Q99PP7
NextBio:352085 Bgee:Q99PP7 CleanEx:MM_TRIM33 Genevestigator:Q99PP7
GermOnline:ENSMUSG00000033014 Uniprot:Q99PP7
Length = 1142
Score = 126 (49.4 bits), Expect = 0.00069, P = 0.00069
Identities = 52/196 (26%), Positives = 94/196 (47%)
Query: 466 SQSQRQRKITKKSKKTVLISKPFENASPPLS--FPNKSRWN-ITPKDQRLHKLVFD--ES 520
S + +Q K + ++S P + +PPLS +S + +T + + D ES
Sbjct: 804 SGAVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDTLTGLENHVKTEPTDISES 863
Query: 521 GLPDGTEKLLEGYKNGLGIICHCC-------NS-EVSPSQ--FEAHADGGNLLPCDGCPR 570
G L+ G K+ + + H NS + P++ +GG+LL C+ CP+
Sbjct: 864 CKQSGLSNLVNG-KSPIRNLMHRSARIGGDGNSKDDDPNEDWCAVCQNGGDLLCCEKCPK 922
Query: 571 AFHKEC--ASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVE---AGRVS-GVDSVEQIT 624
FH C +L S P GDW C +C+++ K +++D + ++ G+ + G+ V+Q
Sbjct: 923 VFHLTCHVPTLLSFPSGDWICTFCRDI--GKPEVEYDCDNMQHSKKGKTAQGLSPVDQ-- 978
Query: 625 KRCIRIVKNLEA-ELS 639
++C R++ L ELS
Sbjct: 979 RKCERLLLYLYCHELS 994
>UNIPROTKB|F1PLN6 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0070410 "co-SMAD binding" evidence=IEA] [GO:0030514 "negative
regulation of BMP signaling pathway" evidence=IEA] [GO:0017015
"regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0030514
GO:GO:0017015 GeneTree:ENSGT00530000062982 OMA:PIRSLMH
EMBL:AAEX03010993 Ensembl:ENSCAFT00000015037 Uniprot:F1PLN6
Length = 995
Score = 125 (49.1 bits), Expect = 0.00075, P = 0.00075
Identities = 30/89 (33%), Positives = 53/89 (59%)
Query: 558 DGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVE---AG 612
+GG+LL C+ CP+ FH C +L S P GDW C +C+++ K +++D + ++ G
Sbjct: 763 NGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDI--GKPEVEYDCDNLQHSKKG 820
Query: 613 RVS-GVDSVEQITKRCIRIVKNLEA-ELS 639
+ + G+ V+Q ++C R++ L ELS
Sbjct: 821 KTAQGLSPVDQ--RKCERLLLYLYCHELS 847
>MGI|MGI:1276545 [details] [associations]
symbol:Nsd1 "nuclear receptor-binding SET-domain protein 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IMP]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0003712
"transcription cofactor activity" evidence=ISO;IDA] [GO:0003714
"transcription corepressor activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0010452 "histone H3-K36
methylation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IPI]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=IPI]
[GO:0032259 "methylation" evidence=IEA] [GO:0035097 "histone
methyltransferase complex" evidence=IC] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0042799 "histone
methyltransferase activity (H4-K20 specific)" evidence=IDA]
[GO:0042974 "retinoic acid receptor binding" evidence=IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046965 "retinoid X receptor binding" evidence=IPI] [GO:0046966
"thyroid hormone receptor binding" evidence=IPI] [GO:0046975
"histone methyltransferase activity (H3-K36 specific)"
evidence=ISO;IDA] [GO:0050681 "androgen receptor binding"
evidence=ISO] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
EMBL:AF064553 MGI:MGI:1276545 Pfam:PF00855 GO:GO:0003714
GO:GO:0005694 GO:GO:0045893 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0000122 UniGene:Mm.12964
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0050681 eggNOG:COG2940 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GO:GO:0042799 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 GO:GO:0046975 GO:GO:0035097
HOGENOM:HOG000113857 HOVERGEN:HBG007518 OrthoDB:EOG49GKFN
ChiTaRS:NSD1 EMBL:AK082820 EMBL:AK004485 IPI:IPI00131111 PIR:T14342
UniGene:Mm.168965 ProteinModelPortal:O88491 SMR:O88491
STRING:O88491 PhosphoSite:O88491 PaxDb:O88491 PRIDE:O88491
UCSC:uc007qqd.1 CleanEx:MM_NSD1 Genevestigator:O88491
GermOnline:ENSMUSG00000021488 Uniprot:O88491
Length = 2588
Score = 136 (52.9 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 543 CCNSE-VSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 593
C N E V+ S ++GG+LL CD CP AFH+EC ++ IP+G+WYC C+
Sbjct: 1597 CRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNID-IPEGNWYCNDCK 1647
Score = 49 (22.3 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 665 CEREFHVGCLKKHKMADLRELPKGKWFC 692
C + +H CL +L + P GKW C
Sbjct: 2036 CPKVYHADCL------NLTKRPAGKWEC 2057
Score = 48 (22.0 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 20/65 (30%), Positives = 28/65 (43%)
Query: 121 IEETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVT 180
+ E +GK IC E CF K+ G +V L C K + V+ VT
Sbjct: 1471 LPEMPRGKF--ICNECHTGIHTCFVCKQSGEDVKRCLLPLCGK--FYHEECVQKYPPTVT 1526
Query: 181 QSEGF 185
Q++GF
Sbjct: 1527 QNKGF 1531
>RGD|1307748 [details] [associations]
symbol:Nsd1 "nuclear receptor binding SET domain protein 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001702 "gastrulation with mouth forming second"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003712
"transcription cofactor activity" evidence=IEA;ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA;ISO] [GO:0010452
"histone H3-K36 methylation" evidence=ISO] [GO:0016571 "histone
methylation" evidence=ISO] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=ISO] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0042054 "histone
methyltransferase activity" evidence=ISO] [GO:0042799 "histone
methyltransferase activity (H4-K20 specific)" evidence=ISO]
[GO:0042974 "retinoic acid receptor binding" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0046965 "retinoid X receptor binding"
evidence=ISO] [GO:0046966 "thyroid hormone receptor binding"
evidence=ISO] [GO:0046975 "histone methyltransferase activity
(H3-K36 specific)" evidence=ISO] [GO:0050681 "androgen receptor
binding" evidence=IEA;ISO] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 RGD:1307748 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:CH474032
CTD:64324 KO:K15588 OrthoDB:EOG49GKFN IPI:IPI00779102
RefSeq:NP_001100807.1 UniGene:Rn.224915 Ensembl:ENSRNOT00000060928
GeneID:306764 KEGG:rno:306764 UCSC:RGD:1307748 NextBio:656473
Uniprot:D4AA06
Length = 2381
Score = 136 (52.9 bits), Expect = 0.00077, Sum P(4) = 0.00077
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 543 CCNSE-VSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 593
C N E V+ S ++GG+LL CD CP AFH+EC ++ IP+G+WYC C+
Sbjct: 1389 CRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNID-IPEGNWYCNDCK 1439
Score = 49 (22.3 bits), Expect = 0.00077, Sum P(4) = 0.00077
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 665 CEREFHVGCLKKHKMADLRELPKGKWFC 692
C + +H CL +L + P GKW C
Sbjct: 1828 CPKVYHADCL------NLTKRPAGKWEC 1849
Score = 46 (21.3 bits), Expect = 0.00077, Sum P(4) = 0.00077
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 341 RCKGTFPITCVGKTG-P-GP-LCNSC 363
+C G F + C+G T P G +CN C
Sbjct: 1251 QCCGAFHLECLGLTEMPRGKFICNEC 1276
Score = 46 (21.3 bits), Expect = 0.00077, Sum P(4) = 0.00077
Identities = 52/261 (19%), Positives = 95/261 (36%)
Query: 4 ELDYELAGSLDETSTQSLPQAGIQASDCVKA----ACENVRCKRFKVTKVNGFIVYSRVK 59
E D L G L + S A + C K+ + +N+ KR V K G + + K
Sbjct: 159 EHDLLLNGCLKSLAFDSEHSADEKEKPCAKSRVRKSSDNI--KRTSVKK--GLMPFEAQK 214
Query: 60 RSRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQMTVEN 119
R S + L D + ++ K ++++ ++ + + + Q T +
Sbjct: 215 EERRGKSPENLGLDFLSGGVSDKQASNELSRIANSLTGSSAAPGQFLF--SSCGQNTAKT 272
Query: 120 VIEETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLV 179
E + + + ISK +K +V + + C + + + V V
Sbjct: 273 DFETPNCDSLSGLSESALISKHSGEKKKLQPGQVCSSKVQLCYVGAGDEEKRSDSVSVCT 332
Query: 180 TQSEGFG-------NESM--SLIEV-EAIAEGSALTSPKKNLELKMSKKISLN----KKP 225
T +G N S++EV +A+ + S KN E K S+ + N K+
Sbjct: 333 TSDDGSSDLDPTEHNSEFHKSVLEVTDALDKTENALSMHKN-ETKYSRYPATNRVKEKQK 391
Query: 226 MTVTELFETGLLDGVSVVYMG 246
+T L+D V G
Sbjct: 392 SLITNSHTDHLMDSTKTVEPG 412
Score = 45 (20.9 bits), Expect = 0.00095, Sum P(4) = 0.00095
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 455 NSTPVTSVHKSSQSQRQRKITKKSKKT 481
N +P+TS+ KS + + + + +KT
Sbjct: 511 NGSPMTSISKSGKGEGLKLLNNMHEKT 537
>UNIPROTKB|E2QYC0 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:MSSQAQG
GeneTree:ENSGT00440000033777 EMBL:AAEX03006672
Ensembl:ENSCAFT00000029911 Uniprot:E2QYC0
Length = 910
Score = 108 (43.1 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 558 DGGNLLPCDGCPRAFHKECAS--LSS--IPQGDWYCKYCQNMFERKRFLQHDANAVEAGR 613
+GG+LL CD CP AFH +C + LS +P G+W C C RK+ Q E G
Sbjct: 64 EGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT--VRRKKREQKK----ELGH 117
Query: 614 VSGVDSVEQITKR 626
V+G+ V++ KR
Sbjct: 118 VNGL--VDKSGKR 128
Score = 67 (28.6 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 659 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 692
++ CD C FH+ CL+ L +P G+W C
Sbjct: 286 LIQCDYCPLLFHMDCLEP----PLTAMPLGRWMC 315
Score = 44 (20.5 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 892 SQLVTFKGTSMLQKRVPACRIGSSSTDS 919
S + + TS LQ++ +IG TDS
Sbjct: 630 SSCASIENTSTLQRKTVQSQIGPPLTDS 657
>UNIPROTKB|K7EQP5 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000583747 Uniprot:K7EQP5
Length = 117
Score = 97 (39.2 bits), Expect = 0.00089, P = 0.00089
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 558 DGGNLLPCDGCPRAFHKECAS--LSS--IPQGDWYC 589
+GG+LL CD CP AFH +C + LS +P G+W C
Sbjct: 82 EGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMC 117
>MGI|MGI:1338803 [details] [associations]
symbol:Aire "autoimmune regulator (autoimmune
polyendocrinopathy candidiasis ectodermal dystrophy)" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006959 "humoral
immune response" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000770 InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00184 SMART:SM00249 SMART:SM00258
MGI:MGI:1338803 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0006351 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 CTD:326 eggNOG:NOG317492 HOVERGEN:HBG014961
KO:K10603 OMA:NDDECAV GO:GO:0042393 GO:GO:0006959
Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763 EMBL:AF105002
EMBL:AF128772 EMBL:AF128773 EMBL:AJ007715 EMBL:AF079536
EMBL:AJ132243 EMBL:AF128115 EMBL:AF128116 EMBL:AF128117
EMBL:AF128118 EMBL:AF128119 EMBL:AF128120 EMBL:AF128121
EMBL:AF128122 EMBL:AF128123 EMBL:AF128124 EMBL:AF128125
EMBL:AJ243821 IPI:IPI00129025 IPI:IPI00223523 IPI:IPI00223524
IPI:IPI00223525 IPI:IPI00230215 IPI:IPI00230216 IPI:IPI00230217
IPI:IPI00230218 IPI:IPI00230219 IPI:IPI00230220 IPI:IPI00230221
IPI:IPI00400171 RefSeq:NP_001258478.1 RefSeq:NP_001258479.1
RefSeq:NP_001258480.1 RefSeq:NP_001258481.1 RefSeq:NP_001258482.1
RefSeq:NP_001258483.1 RefSeq:NP_001258484.1 RefSeq:NP_001258485.1
RefSeq:NP_001258486.1 RefSeq:NP_001258487.1 RefSeq:NP_001258488.1
RefSeq:NP_033776.1 UniGene:Mm.35300 ProteinModelPortal:Q9Z0E3
SMR:Q9Z0E3 DIP:DIP-31030N IntAct:Q9Z0E3 STRING:Q9Z0E3
PhosphoSite:Q9Z0E3 PRIDE:Q9Z0E3 Ensembl:ENSMUST00000019257
Ensembl:ENSMUST00000105395 Ensembl:ENSMUST00000105396
Ensembl:ENSMUST00000128241 Ensembl:ENSMUST00000130972
Ensembl:ENSMUST00000140636 Ensembl:ENSMUST00000145975
Ensembl:ENSMUST00000148469 Ensembl:ENSMUST00000154374
Ensembl:ENSMUST00000155021 Ensembl:ENSMUST00000156417 GeneID:11634
KEGG:mmu:11634 UCSC:uc007fws.1 UCSC:uc007fwt.1 UCSC:uc007fwu.1
UCSC:uc007fwv.1 UCSC:uc007fww.1 UCSC:uc007fwx.1 UCSC:uc007fwz.1
UCSC:uc007fxa.1 UCSC:uc007fxb.1 GeneTree:ENSGT00440000034278
InParanoid:Q9Z0E3 ChiTaRS:AIRE NextBio:279201 Bgee:Q9Z0E3
Genevestigator:Q9Z0E3 GermOnline:ENSMUSG00000000731 Uniprot:Q9Z0E3
Length = 552
Score = 121 (47.7 bits), Expect = 0.00094, P = 0.00094
Identities = 22/37 (59%), Positives = 23/37 (62%)
Query: 558 DGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 592
DGG L+ CDGCPRAFH C S L IP G W C C
Sbjct: 306 DGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCC 342
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 929 893 0.00087 122 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 69
No. of states in DFA: 622 (66 KB)
Total size of DFA: 430 KB (2204 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 82.08u 0.10s 82.18t Elapsed: 00:00:04
Total cpu time: 82.09u 0.11s 82.20t Elapsed: 00:00:04
Start: Mon May 20 17:59:07 2013 End: Mon May 20 17:59:11 2013