Query 002381
Match_columns 929
No_of_seqs 453 out of 1898
Neff 4.9
Searched_HMMs 46136
Date Thu Mar 28 22:45:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002381.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002381hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1246 ArgA N-acetylglutamate 99.1 7.1E-11 1.5E-15 117.7 6.6 90 793-886 38-128 (153)
2 PRK10314 putative acyltransfer 99.1 6.9E-10 1.5E-14 110.5 10.2 115 755-882 16-135 (153)
3 KOG1244 Predicted transcriptio 99.1 2.8E-11 6.1E-16 128.2 0.1 102 536-697 222-329 (336)
4 KOG0956 PHD finger protein AF1 99.0 1.3E-10 2.9E-15 134.7 4.7 142 559-706 19-187 (900)
5 PF13508 Acetyltransf_7: Acety 99.0 2.4E-09 5.2E-14 93.9 11.1 77 797-878 3-79 (79)
6 PF00583 Acetyltransf_1: Acety 99.0 3.2E-09 6.9E-14 92.3 9.8 74 803-877 2-83 (83)
7 KOG4323 Polycomb-like PHD Zn-f 98.9 7.4E-10 1.6E-14 126.5 5.5 212 535-768 80-301 (464)
8 PF13673 Acetyltransf_10: Acet 98.9 9.7E-09 2.1E-13 94.7 10.7 74 797-876 44-117 (117)
9 KOG1512 PHD Zn-finger protein 98.9 4.4E-10 9.6E-15 119.8 1.3 81 559-697 276-361 (381)
10 PTZ00330 acetyltransferase; Pr 98.8 4.7E-08 1E-12 93.9 10.8 83 798-881 53-141 (147)
11 PRK10146 aminoalkylphosphonic 98.7 3.9E-08 8.5E-13 94.1 9.2 80 800-880 50-137 (144)
12 PLN02706 glucosamine 6-phospha 98.7 7E-08 1.5E-12 93.7 10.6 82 798-880 54-143 (150)
13 PLN02825 amino-acid N-acetyltr 98.7 6.5E-08 1.4E-12 113.6 11.6 104 800-907 410-514 (515)
14 PF15446 zf-PHD-like: PHD/FYVE 98.7 1.7E-08 3.8E-13 101.5 5.4 133 540-678 1-143 (175)
15 PRK07922 N-acetylglutamate syn 98.7 8.4E-08 1.8E-12 96.9 10.0 79 800-881 48-127 (169)
16 cd02169 Citrate_lyase_ligase C 98.7 6E-08 1.3E-12 107.0 9.7 74 801-880 10-83 (297)
17 PRK07757 acetyltransferase; Pr 98.7 9E-08 2E-12 93.1 9.7 81 801-884 45-125 (152)
18 PF13527 Acetyltransf_9: Acety 98.7 1.8E-07 3.9E-12 88.1 11.0 111 756-879 10-127 (127)
19 PRK03624 putative acetyltransf 98.6 1.1E-07 2.3E-12 89.4 8.8 82 798-881 46-130 (140)
20 KOG0825 PHD Zn-finger protein 98.6 2.6E-08 5.7E-13 117.2 4.1 53 636-699 213-266 (1134)
21 TIGR01890 N-Ac-Glu-synth amino 98.6 2.3E-07 5E-12 106.8 11.4 86 801-888 326-412 (429)
22 TIGR01575 rimI ribosomal-prote 98.5 4.9E-07 1.1E-11 84.1 10.1 80 800-881 34-116 (131)
23 PRK10975 TDP-fucosamine acetyl 98.5 4.5E-07 9.7E-12 92.8 10.2 84 797-881 102-188 (194)
24 TIGR00124 cit_ly_ligase [citra 98.5 3.2E-07 6.9E-12 102.8 9.9 81 797-883 31-111 (332)
25 TIGR02382 wecD_rffC TDP-D-fuco 98.5 4.6E-07 1E-11 92.7 10.2 80 801-881 103-185 (191)
26 KOG0955 PHD finger protein BR1 98.5 7.3E-08 1.6E-12 119.4 4.8 127 536-679 217-365 (1051)
27 COG2153 ElaA Predicted acyltra 98.5 2.8E-07 6.1E-12 91.3 7.8 86 798-884 51-139 (155)
28 KOG4299 PHD Zn-finger protein 98.5 8.5E-08 1.8E-12 112.1 4.8 58 529-595 242-305 (613)
29 COG5141 PHD zinc finger-contai 98.5 5.7E-08 1.2E-12 110.0 3.2 128 537-682 192-341 (669)
30 PRK05279 N-acetylglutamate syn 98.5 6.1E-07 1.3E-11 103.6 10.9 87 800-888 337-424 (441)
31 PRK09491 rimI ribosomal-protei 98.5 1.2E-06 2.5E-11 85.0 11.0 85 795-881 38-125 (146)
32 KOG0954 PHD finger protein [Ge 98.4 1.2E-07 2.6E-12 111.7 4.3 154 532-701 265-441 (893)
33 PRK12308 bifunctional arginino 98.4 5.6E-07 1.2E-11 108.2 10.0 82 800-884 506-587 (614)
34 TIGR03827 GNAT_ablB putative b 98.4 7.8E-07 1.7E-11 96.1 9.6 84 797-881 158-245 (266)
35 KOG4299 PHD Zn-finger protein 98.4 1.9E-07 4.2E-12 109.1 4.0 51 640-699 255-305 (613)
36 KOG0383 Predicted helicase [Ge 98.4 1.5E-07 3.3E-12 112.9 2.8 156 567-764 1-163 (696)
37 KOG4443 Putative transcription 98.4 1.4E-07 3E-12 110.5 1.9 92 538-692 18-112 (694)
38 PRK13688 hypothetical protein; 98.4 1.5E-06 3.2E-11 87.6 8.9 76 801-882 49-134 (156)
39 PRK10140 putative acetyltransf 98.3 2.5E-06 5.5E-11 82.9 10.2 85 797-883 51-143 (162)
40 PRK09831 putative acyltransfer 98.3 1.7E-06 3.6E-11 84.5 8.3 73 800-883 56-128 (147)
41 PHA00673 acetyltransferase dom 98.3 3.5E-06 7.7E-11 85.0 10.8 84 797-881 55-146 (154)
42 TIGR03448 mycothiol_MshD mycot 98.2 8.5E-06 1.9E-10 87.9 11.3 81 798-881 47-128 (292)
43 TIGR03448 mycothiol_MshD mycot 98.2 6.8E-06 1.5E-10 88.7 9.8 86 795-881 198-288 (292)
44 KOG3139 N-acetyltransferase [G 98.2 1.1E-05 2.4E-10 81.4 10.2 73 808-881 68-146 (165)
45 KOG3396 Glucosamine-phosphate 98.1 9.8E-06 2.1E-10 79.7 8.6 83 797-880 53-143 (150)
46 TIGR02406 ectoine_EctA L-2,4-d 98.1 1.3E-05 2.8E-10 80.0 9.5 83 798-881 40-128 (157)
47 COG0456 RimI Acetyltransferase 98.1 1E-05 2.2E-10 80.0 7.9 76 807-883 72-156 (177)
48 TIGR03103 trio_acet_GNAT GNAT- 98.0 1.6E-05 3.5E-10 94.6 10.5 85 796-881 122-217 (547)
49 PF13420 Acetyltransf_4: Acety 98.0 3.1E-05 6.8E-10 75.2 10.6 81 799-881 52-139 (155)
50 cd04301 NAT_SF N-Acyltransfera 98.0 2.4E-05 5.2E-10 62.1 7.9 61 800-860 2-64 (65)
51 PF08445 FR47: FR47-like prote 98.0 2.6E-05 5.6E-10 71.0 8.7 75 805-881 6-82 (86)
52 PRK01346 hypothetical protein; 98.0 2.2E-05 4.7E-10 89.5 10.1 80 799-881 49-136 (411)
53 PHA01807 hypothetical protein 98.0 1.7E-05 3.6E-10 79.9 8.1 81 798-881 54-141 (153)
54 PRK10562 putative acetyltransf 97.9 3.9E-05 8.5E-10 74.5 8.9 76 800-882 51-126 (145)
55 PRK15130 spermidine N1-acetylt 97.9 6E-05 1.3E-09 76.1 10.3 82 798-881 58-145 (186)
56 PRK10514 putative acetyltransf 97.9 4.7E-05 1E-09 73.3 9.1 73 803-883 56-128 (145)
57 PF00628 PHD: PHD-finger; Int 97.9 2.2E-06 4.8E-11 70.2 -0.2 48 641-697 2-49 (51)
58 TIGR01686 FkbH FkbH-like domai 97.9 4.8E-05 1E-09 84.6 10.2 82 796-879 230-319 (320)
59 PF13523 Acetyltransf_8: Acety 97.9 8.4E-05 1.8E-09 72.5 10.5 86 795-881 46-141 (152)
60 smart00249 PHD PHD zinc finger 97.9 1.3E-05 2.7E-10 63.0 3.4 46 641-696 2-47 (47)
61 KOG0383 Predicted helicase [Ge 97.9 9.9E-06 2.1E-10 97.7 4.0 49 536-596 45-95 (696)
62 TIGR01211 ELP3 histone acetylt 97.8 5.5E-05 1.2E-09 89.6 9.7 77 804-881 421-516 (522)
63 COG5034 TNG2 Chromatin remodel 97.8 2.1E-05 4.6E-10 84.0 4.7 49 535-594 218-269 (271)
64 TIGR03585 PseH pseudaminic aci 97.8 0.00016 3.5E-09 70.1 10.6 81 800-883 54-140 (156)
65 PF00628 PHD: PHD-finger; Int 97.8 1.2E-05 2.6E-10 65.8 2.1 46 540-594 1-50 (51)
66 PF13718 GNAT_acetyltr_2: GNAT 97.8 0.00018 3.8E-09 75.5 10.9 87 794-881 24-176 (196)
67 COG3393 Predicted acetyltransf 97.7 9E-05 2E-09 80.2 8.7 84 797-881 177-262 (268)
68 KOG1244 Predicted transcriptio 97.7 1.2E-05 2.6E-10 86.3 1.8 39 558-596 292-332 (336)
69 KOG1973 Chromatin remodeling p 97.7 1.7E-05 3.7E-10 86.9 2.2 49 536-595 217-268 (274)
70 KOG1512 PHD Zn-finger protein 97.7 1.9E-05 4.1E-10 85.2 1.9 50 536-594 312-362 (381)
71 KOG3397 Acetyltransferases [Ge 97.6 7.6E-05 1.7E-09 76.1 5.9 77 805-883 65-143 (225)
72 PRK10809 ribosomal-protein-S5- 97.6 0.00027 5.8E-09 72.0 9.7 83 797-881 77-166 (194)
73 COG3153 Predicted acetyltransf 97.6 0.00015 3.3E-09 74.5 7.6 140 752-911 10-154 (171)
74 smart00249 PHD PHD zinc finger 97.5 6.8E-05 1.5E-09 58.8 3.3 44 540-592 1-47 (47)
75 PF13302 Acetyltransf_3: Acety 97.5 0.00094 2E-08 63.4 11.2 80 796-877 55-142 (142)
76 PRK10151 ribosomal-protein-L7/ 97.5 0.00064 1.4E-08 68.3 10.5 80 801-882 71-156 (179)
77 COG5034 TNG2 Chromatin remodel 97.4 6.6E-05 1.4E-09 80.3 1.7 48 636-698 219-269 (271)
78 KOG1473 Nucleosome remodeling 97.3 4.8E-05 1E-09 93.6 0.2 130 535-703 341-483 (1414)
79 COG1247 Sortase and related ac 97.2 0.0015 3.2E-08 67.3 9.1 115 789-909 44-166 (169)
80 KOG0825 PHD Zn-finger protein 97.2 0.00012 2.7E-09 87.3 1.4 48 537-593 214-264 (1134)
81 KOG4443 Putative transcription 97.2 0.00016 3.6E-09 85.5 2.0 140 529-697 59-200 (694)
82 KOG1973 Chromatin remodeling p 97.1 0.00019 4.1E-09 78.8 1.2 36 656-698 229-267 (274)
83 KOG0957 PHD finger protein [Ge 97.0 0.00027 6E-09 81.1 2.2 125 540-679 121-277 (707)
84 KOG3216 Diamine acetyltransfer 96.9 0.013 2.9E-07 59.3 11.9 123 751-881 15-146 (163)
85 KOG0957 PHD finger protein [Ge 96.8 0.00046 9.9E-09 79.4 1.2 47 639-696 545-595 (707)
86 PF13831 PHD_2: PHD-finger; PD 96.5 0.00063 1.4E-08 53.0 0.1 34 560-593 2-36 (36)
87 PF12746 GNAT_acetyltran: GNAT 96.5 0.016 3.5E-07 63.7 10.5 77 803-881 171-247 (265)
88 PF08444 Gly_acyl_tr_C: Aralky 96.4 0.0056 1.2E-07 56.9 5.6 74 802-880 4-79 (89)
89 cd04718 BAH_plant_2 BAH, or Br 96.3 0.002 4.4E-08 64.7 1.9 27 668-699 1-27 (148)
90 PF12568 DUF3749: Acetyltransf 96.3 0.031 6.8E-07 55.1 10.0 81 796-881 39-125 (128)
91 COG0454 WecD Histone acetyltra 96.2 0.0066 1.4E-07 51.0 4.3 44 827-876 87-130 (156)
92 KOG0955 PHD finger protein BR1 96.1 0.0032 6.9E-08 79.4 3.2 57 636-703 217-273 (1051)
93 PF14542 Acetyltransf_CG: GCN5 96.1 0.026 5.6E-07 50.9 8.2 58 801-859 3-60 (78)
94 KOG4144 Arylalkylamine N-acety 96.1 0.0045 9.8E-08 62.6 3.4 61 820-881 100-161 (190)
95 COG1444 Predicted P-loop ATPas 96.1 0.0078 1.7E-07 73.9 5.9 58 822-881 532-591 (758)
96 COG1670 RimL Acetyltransferase 96.0 0.044 9.5E-07 53.7 9.8 88 795-884 64-161 (187)
97 COG3053 CitC Citrate lyase syn 96.0 0.026 5.6E-07 62.4 8.7 79 797-881 37-115 (352)
98 KOG2488 Acetyltransferase (GNA 95.9 0.024 5.1E-07 59.3 7.8 84 797-881 93-182 (202)
99 cd04718 BAH_plant_2 BAH, or Br 95.9 0.0037 8E-08 62.9 1.8 25 571-595 1-27 (148)
100 KOG1245 Chromatin remodeling c 95.8 0.0024 5.2E-08 83.1 -0.1 55 636-701 1106-1160(1404)
101 COG2388 Predicted acetyltransf 95.8 0.023 5E-07 53.9 6.4 62 795-858 15-76 (99)
102 KOG0956 PHD finger protein AF1 95.6 0.0053 1.2E-07 73.2 1.8 52 637-699 4-57 (900)
103 KOG0954 PHD finger protein [Ge 94.8 0.013 2.8E-07 70.6 1.6 52 637-699 270-321 (893)
104 KOG1245 Chromatin remodeling c 94.7 0.0075 1.6E-07 78.7 -0.5 52 535-595 1105-1158(1404)
105 KOG3138 Predicted N-acetyltran 94.5 0.033 7.2E-07 58.3 3.7 62 821-883 89-154 (187)
106 COG4552 Eis Predicted acetyltr 94.4 0.057 1.2E-06 61.1 5.6 84 791-881 35-127 (389)
107 COG5141 PHD zinc finger-contai 94.2 0.019 4E-07 66.6 1.3 47 639-696 194-240 (669)
108 KOG4323 Polycomb-like PHD Zn-f 94.2 0.025 5.4E-07 66.1 2.2 49 540-595 170-224 (464)
109 PF13480 Acetyltransf_6: Acety 93.9 0.41 8.8E-06 45.3 9.6 66 797-863 71-136 (142)
110 TIGR03694 exosort_acyl putativ 93.2 0.47 1E-05 51.5 9.7 120 754-878 17-195 (241)
111 KOG3234 Acetyltransferase, (GN 92.7 0.15 3.3E-06 52.1 4.6 58 821-879 69-129 (173)
112 COG1243 ELP3 Histone acetyltra 92.3 0.11 2.4E-06 60.6 3.6 51 830-881 459-509 (515)
113 KOG3235 Subunit of the major N 92.0 0.45 9.8E-06 48.8 7.1 81 801-881 45-135 (193)
114 smart00258 SAND SAND domain. 92.0 0.13 2.8E-06 46.4 2.8 50 260-311 19-69 (73)
115 PF06852 DUF1248: Protein of u 91.9 0.9 1.9E-05 47.6 9.4 83 798-881 48-137 (181)
116 PF13831 PHD_2: PHD-finger; PD 91.9 0.022 4.7E-07 44.5 -1.9 33 657-696 2-35 (36)
117 PF01342 SAND: SAND domain; I 89.2 0.087 1.9E-06 48.3 -0.8 55 255-311 18-78 (82)
118 PF00765 Autoind_synth: Autoin 88.9 2.3 5.1E-05 44.4 9.4 82 795-878 44-152 (182)
119 PRK13834 putative autoinducer 88.6 2.7 5.9E-05 44.7 9.8 118 754-878 16-162 (207)
120 PF12861 zf-Apc11: Anaphase-pr 87.7 0.26 5.7E-06 45.6 1.3 58 537-596 20-81 (85)
121 COG3981 Predicted acetyltransf 87.6 1 2.2E-05 46.8 5.6 68 796-865 69-141 (174)
122 PF12678 zf-rbx1: RING-H2 zinc 87.3 0.15 3.2E-06 45.5 -0.5 54 538-593 19-73 (73)
123 PF07897 DUF1675: Protein of u 86.3 1.1 2.3E-05 50.0 5.3 68 226-297 209-283 (284)
124 cd04264 DUF619-NAGS DUF619 dom 84.9 2 4.4E-05 40.8 5.8 48 803-850 14-63 (99)
125 PF13639 zf-RING_2: Ring finge 82.4 0.14 3E-06 40.8 -2.7 44 539-593 1-44 (44)
126 PF14446 Prok-RING_1: Prokaryo 81.1 1.1 2.4E-05 38.3 2.1 34 537-578 4-37 (54)
127 PF07227 DUF1423: Protein of u 79.6 1.9 4E-05 50.7 4.0 56 641-700 131-193 (446)
128 PF02474 NodA: Nodulation prot 79.5 3 6.5E-05 43.5 5.0 53 821-875 85-137 (196)
129 TIGR03019 pepcterm_femAB FemAB 77.4 6.6 0.00014 44.0 7.5 81 799-880 197-280 (330)
130 cd04265 DUF619-NAGS-U DUF619 d 74.9 6 0.00013 37.7 5.4 48 803-850 15-63 (99)
131 PF11793 FANCL_C: FANCL C-term 74.3 1.9 4.1E-05 38.4 1.7 53 538-596 2-65 (70)
132 KOG2535 RNA polymerase II elon 73.0 4.8 0.0001 45.9 4.8 65 813-881 481-547 (554)
133 KOG1473 Nucleosome remodeling 72.9 1.9 4E-05 55.1 1.8 45 639-697 345-389 (1414)
134 PF01233 NMT: Myristoyl-CoA:pr 67.3 45 0.00097 34.7 9.9 111 736-857 22-146 (162)
135 KOG2752 Uncharacterized conser 66.4 5.5 0.00012 44.9 3.5 121 529-677 45-167 (345)
136 COG3818 Predicted acetyltransf 65.9 18 0.00038 36.6 6.5 59 826-884 89-151 (167)
137 PF15446 zf-PHD-like: PHD/FYVE 65.6 3.4 7.4E-05 42.9 1.6 35 641-678 2-36 (175)
138 PF01853 MOZ_SAS: MOZ/SAS fami 64.9 18 0.00039 38.4 6.7 84 753-853 25-112 (188)
139 PF14446 Prok-RING_1: Prokaryo 63.8 4.7 0.0001 34.6 1.8 35 639-678 6-40 (54)
140 PF13832 zf-HC5HC2H_2: PHD-zin 63.1 3 6.4E-05 39.5 0.6 32 639-678 56-89 (110)
141 KOG4628 Predicted E3 ubiquitin 62.3 5.3 0.00012 45.8 2.5 48 538-597 229-278 (348)
142 KOG4135 Predicted phosphogluco 61.8 18 0.00038 37.3 5.8 58 821-879 107-168 (185)
143 PLN03238 probable histone acet 60.4 13 0.00028 41.7 5.0 33 822-854 156-188 (290)
144 PF13771 zf-HC5HC2H: PHD-like 60.2 3.3 7.2E-05 37.6 0.4 32 639-678 37-70 (90)
145 PF04377 ATE_C: Arginine-tRNA- 57.7 43 0.00094 33.4 7.7 63 796-859 38-100 (128)
146 KOG2779 N-myristoyl transferas 57.5 29 0.00062 40.1 7.1 127 737-874 80-226 (421)
147 PRK00756 acyltransferase NodA; 57.4 17 0.00038 37.9 4.9 40 820-860 84-123 (196)
148 COG5628 Predicted acetyltransf 55.7 36 0.00077 34.0 6.5 74 799-877 39-119 (143)
149 PF13880 Acetyltransf_13: ESCO 54.8 9.4 0.0002 34.4 2.3 27 824-850 8-34 (70)
150 PTZ00064 histone acetyltransfe 51.2 18 0.0004 43.3 4.5 82 754-852 330-415 (552)
151 PLN03239 histone acetyltransfe 50.3 22 0.00049 40.9 4.9 30 823-852 215-244 (351)
152 PF13444 Acetyltransf_5: Acety 50.0 33 0.00072 32.0 5.3 25 819-843 76-100 (101)
153 COG0143 MetG Methionyl-tRNA sy 49.6 20 0.00043 43.8 4.7 30 639-676 143-172 (558)
154 KOG1734 Predicted RING-contain 48.7 4.6 9.9E-05 44.7 -0.8 56 536-596 222-280 (328)
155 PF12261 T_hemolysin: Thermost 48.4 32 0.0007 36.2 5.4 55 820-879 86-140 (179)
156 KOG2747 Histone acetyltransfer 47.5 20 0.00043 41.9 4.0 75 753-845 207-284 (396)
157 PHA02929 N1R/p28-like protein; 47.4 7.8 0.00017 42.4 0.7 54 537-596 173-226 (238)
158 cd00162 RING RING-finger (Real 46.7 6.2 0.00013 29.9 -0.1 40 541-594 2-43 (45)
159 PF14569 zf-UDP: Zinc-binding 46.7 3.9 8.4E-05 37.5 -1.4 58 535-598 6-63 (80)
160 PF02591 DUF164: Putative zinc 45.2 7.6 0.00017 32.8 0.2 35 537-571 21-55 (56)
161 PLN00104 MYST -like histone ac 45.1 23 0.0005 42.1 4.1 78 754-848 252-333 (450)
162 KOG1246 DNA-binding protein ju 43.1 17 0.00038 46.7 3.0 48 640-699 157-204 (904)
163 PLN02400 cellulose synthase 42.7 20 0.00044 46.6 3.4 60 534-599 32-91 (1085)
164 PF10497 zf-4CXXC_R1: Zinc-fin 42.4 12 0.00025 36.1 1.0 49 536-594 5-69 (105)
165 KOG1428 Inhibitor of type V ad 42.1 5.5 0.00012 52.2 -1.6 31 567-597 3506-3544(3738)
166 PF04958 AstA: Arginine N-succ 42.0 37 0.00081 39.1 5.1 108 750-877 30-184 (342)
167 PF13832 zf-HC5HC2H_2: PHD-zin 41.7 14 0.0003 35.0 1.4 31 537-578 54-86 (110)
168 COG5194 APC11 Component of SCF 41.1 7 0.00015 36.1 -0.7 29 566-596 52-80 (88)
169 COG3916 LasI N-acyl-L-homoseri 40.7 1.4E+02 0.0029 32.5 8.6 82 795-877 51-159 (209)
170 PRK14852 hypothetical protein; 39.0 88 0.0019 40.9 8.1 64 819-882 119-182 (989)
171 PRK01305 arginyl-tRNA-protein 38.8 1.5E+02 0.0033 32.7 8.9 57 802-859 149-205 (240)
172 PLN02436 cellulose synthase A 38.5 23 0.00049 46.1 2.9 58 535-598 33-90 (1094)
173 PF11793 FANCL_C: FANCL C-term 38.1 15 0.00033 32.6 1.0 34 640-676 4-39 (70)
174 TIGR03244 arg_catab_AstA argin 37.4 56 0.0012 37.7 5.5 49 796-844 54-140 (336)
175 PLN02638 cellulose synthase A 37.0 22 0.00048 46.2 2.5 58 535-598 14-71 (1079)
176 KOG0827 Predicted E3 ubiquitin 36.9 7.5 0.00016 45.0 -1.4 47 539-595 5-54 (465)
177 TIGR03245 arg_AOST_alph argini 36.8 55 0.0012 37.8 5.3 49 796-844 55-141 (336)
178 TIGR03243 arg_catab_AOST argin 36.5 57 0.0012 37.6 5.4 50 795-844 53-140 (335)
179 KOG2036 Predicted P-loop ATPas 36.2 29 0.00063 43.3 3.2 29 822-850 615-643 (1011)
180 PRK10456 arginine succinyltran 36.1 55 0.0012 37.9 5.2 50 795-844 55-142 (344)
181 KOG1493 Anaphase-promoting com 35.8 6.2 0.00013 36.2 -1.8 58 538-596 20-80 (84)
182 KOG1701 Focal adhesion adaptor 34.7 21 0.00046 41.9 1.7 35 640-676 396-430 (468)
183 KOG1298 Squalene monooxygenase 34.5 31 0.00067 40.6 2.9 186 21-246 97-319 (509)
184 PLN02189 cellulose synthase 33.9 29 0.00063 45.0 2.8 58 535-598 31-88 (1040)
185 PF13901 DUF4206: Domain of un 33.6 37 0.00081 36.1 3.2 46 536-594 150-197 (202)
186 KOG1246 DNA-binding protein ju 33.1 30 0.00064 44.6 2.8 49 537-595 154-204 (904)
187 KOG1632 Uncharacterized PHD Zn 32.8 24 0.00052 40.7 1.7 43 658-704 74-118 (345)
188 PHA02926 zinc finger-like prot 32.2 22 0.00047 38.8 1.2 61 533-596 165-229 (242)
189 PF07649 C1_3: C1-like domain; 32.0 15 0.00032 27.4 -0.1 27 641-673 3-29 (30)
190 PF10367 Vps39_2: Vacuolar sor 30.7 36 0.00079 31.4 2.3 33 536-578 76-108 (109)
191 PF13901 DUF4206: Domain of un 30.1 63 0.0014 34.4 4.2 35 292-326 102-137 (202)
192 COG5027 SAS2 Histone acetyltra 29.5 29 0.00063 39.9 1.6 75 753-844 207-285 (395)
193 TIGR02174 CXXU_selWTH selT/sel 29.0 37 0.00081 30.3 1.9 29 40-69 39-67 (72)
194 COG5540 RING-finger-containing 28.7 20 0.00042 40.6 0.1 49 536-595 321-370 (374)
195 PLN02915 cellulose synthase A 26.7 43 0.00092 43.6 2.6 56 537-598 14-69 (1044)
196 PRK13361 molybdenum cofactor b 25.4 1.7E+02 0.0037 33.1 6.8 68 254-335 242-310 (329)
197 PF10497 zf-4CXXC_R1: Zinc-fin 24.9 23 0.0005 34.1 -0.2 52 640-699 9-70 (105)
198 PF10262 Rdx: Rdx family; Int 24.5 21 0.00046 31.9 -0.4 27 41-68 42-68 (76)
199 KOG1642 Ribonuclease, T2 famil 23.8 41 0.00089 37.3 1.4 59 275-333 116-189 (263)
200 PF05301 Mec-17: Touch recepto 23.8 58 0.0013 32.4 2.3 49 829-878 54-103 (120)
201 PF07227 DUF1423: Protein of u 22.7 72 0.0016 38.0 3.2 45 551-595 135-192 (446)
202 PF14545 DBB: Dof, BCAP, and B 22.5 3E+02 0.0064 28.3 7.1 63 795-890 65-127 (142)
203 KOG2114 Vacuolar assembly/sort 22.4 37 0.0008 43.1 0.9 38 540-594 842-880 (933)
204 PF13771 zf-HC5HC2H: PHD-like 22.3 50 0.0011 29.9 1.5 32 536-578 34-67 (90)
205 KOG0804 Cytoplasmic Zn-finger 21.4 39 0.00083 40.1 0.7 46 537-594 174-219 (493)
206 PF07943 PBP5_C: Penicillin-bi 21.3 1.1E+02 0.0024 27.5 3.6 27 805-831 62-88 (91)
207 KOG1829 Uncharacterized conser 21.3 26 0.00055 43.0 -0.7 37 536-578 338-374 (580)
208 PF10080 DUF2318: Predicted me 21.3 55 0.0012 31.6 1.6 61 507-578 2-68 (102)
209 KOG0317 Predicted E3 ubiquitin 21.3 33 0.00071 38.6 0.1 54 532-599 233-286 (293)
210 KOG4628 Predicted E3 ubiquitin 21.3 46 0.001 38.5 1.3 46 639-698 230-275 (348)
211 TIGR03827 GNAT_ablB putative b 20.8 1.4E+02 0.003 32.6 4.8 43 837-880 21-63 (266)
212 COG1675 TFA1 Transcription ini 20.8 62 0.0013 34.1 2.0 65 293-365 72-140 (176)
213 KOG2932 E3 ubiquitin ligase in 20.8 36 0.00079 38.6 0.3 44 539-597 91-134 (389)
214 PF00130 C1_1: Phorbol esters/ 20.3 98 0.0021 25.3 2.7 36 536-578 9-44 (53)
215 KOG1081 Transcription factor N 20.3 64 0.0014 38.7 2.2 46 536-594 87-132 (463)
216 PLN02195 cellulose synthase A 20.0 72 0.0016 41.4 2.7 55 537-597 5-59 (977)
No 1
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.13 E-value=7.1e-11 Score=117.74 Aligned_cols=90 Identities=18% Similarity=0.243 Sum_probs=79.0
Q ss_pred eecceEEEEEeeCCeEEEEEEEE-EeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHH
Q 002381 793 EFGGMYCAILTVNSSVVSAGILR-VFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWT 871 (929)
Q Consensus 793 ~f~GfY~~VL~~~~~vVsaA~lr-i~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~ 871 (929)
++..|+.+ +.+|.+||||.++ +.+.+++||.-|||+|+|||+|+|..|+..++..++.+|++++++.+. . .+-|+
T Consensus 38 ~i~dF~i~--E~~g~viGC~aL~~~~~~~~gE~~~laV~pd~r~~G~G~~Ll~~~~~~Ar~~gi~~lf~LTt-~-~~~~F 113 (153)
T COG1246 38 EIDDFTII--ERDGKVIGCAALHPVLEEDLGELRSLAVHPDYRGSGRGERLLERLLADARELGIKELFVLTT-R-SPEFF 113 (153)
T ss_pred HHhhheee--eeCCcEEEEEeecccCccCeeeEEEEEECHHhcCCCcHHHHHHHHHHHHHHcCCceeeeeec-c-cHHHH
Confidence 44566655 8899999999999 789999999999999999999999999999999999999999999984 2 55666
Q ss_pred hccCcEEcCHHHHHH
Q 002381 872 DKFGFKKIDPELLSI 886 (929)
Q Consensus 872 ~kfGF~~i~~~~l~~ 886 (929)
.++||+.++.+++..
T Consensus 114 ~~~GF~~vd~~~LP~ 128 (153)
T COG1246 114 AERGFTRVDKDELPE 128 (153)
T ss_pred HHcCCeECccccCCH
Confidence 679999999966543
No 2
>PRK10314 putative acyltransferase; Provisional
Probab=99.06 E-value=6.9e-10 Score=110.47 Aligned_cols=115 Identities=16% Similarity=0.126 Sum_probs=86.5
Q ss_pred HHHHHHHhhhhcCCCcccCCCCCCccccccccccCCCcee--cceEEEEEeeCCeEEEEEEEEEeCC--eeEEEeeeEee
Q 002381 755 LLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEF--GGMYCAILTVNSSVVSAGILRVFGQ--EVAELPLVATS 830 (929)
Q Consensus 755 ~La~AL~If~EcF~PiiD~rSgrDLIp~MVy~~~~~~~~f--~GfY~~VL~~~~~vVsaA~lri~g~--~~AElplVAT~ 830 (929)
.+..|+.+=++-|..- -+.+ |. ++.+.|. ..++ +++..++++||+|+++..+. ..++|..|||+
T Consensus 16 ~~~~~~~lR~~VF~~e----q~~~------~~-e~D~~d~~~~~~h-~~~~~~~~~vg~~r~~~~~~~~~~~~i~rv~V~ 83 (153)
T PRK10314 16 QLYALLQLRCAVFVVE----QNCP------YQ-DIDGDDLTGDNRH-ILGWKNDELVAYARILKSDDDLEPVVIGRVIVS 83 (153)
T ss_pred HHHHHHHHHHHHhhhh----cCCC------cc-ccCCCCCCCCcEE-EEEEECCEEEEEEEEecCCCCCCCEEEEEEEEC
Confidence 4667777777777422 1111 11 1222232 1233 34567899999999987543 36899999999
Q ss_pred cCccCCChhHHHHHHHHHHhhhc-CccEEEecChhhhHHHHHhccCcEEcCHH
Q 002381 831 KINHGKGYFQLLFACIEKLLSFL-RVKSIVLPAAEEAESIWTDKFGFKKIDPE 882 (929)
Q Consensus 831 ~~yRgqG~gr~L~~~IE~~l~~l-gV~~LvLpA~~~a~~~w~~kfGF~~i~~~ 882 (929)
++|||+|+|++||..+++.++.. +...++|.|...|++||.+ |||..+++.
T Consensus 84 ~~~rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a~~~a~~fY~k-~GF~~~g~~ 135 (153)
T PRK10314 84 EALRGEKVGQQLMSKTLESCTRHWPDKPVYLGAQAHLQNFYQS-FGFIPVTEV 135 (153)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHCCCCcEEEehHHHHHHHHHH-CCCEECCCc
Confidence 99999999999999999998875 7889999999999999999 999999873
No 3
>KOG1244 consensus Predicted transcription factor Requiem/NEURO-D4 [Transcription]
Probab=99.05 E-value=2.8e-11 Score=128.21 Aligned_cols=102 Identities=27% Similarity=0.739 Sum_probs=80.4
Q ss_pred CCccccccccccccCCcc-cccCCCCceEeccCCCcccccccCCC-----CCCCCCCccccccccccccccccccccccc
Q 002381 536 GLGIICHCCNSEVSPSQF-EAHADGGNLLPCDGCPRAFHKECASL-----SSIPQGDWYCKYCQNMFERKRFLQHDANAV 609 (929)
Q Consensus 536 ~~~i~C~~C~~~vSpS~F-E~hadgG~Ll~CD~Cp~aFH~~CL~L-----~~vP~g~W~Cp~C~~~~~rek~v~~n~n~~ 609 (929)
....+|..|... |.- ....-.++|+.|..|+++-|..||.. ..+....|+|-.|+.
T Consensus 222 ~Pn~YCDFclgd---sr~nkkt~~peelvscsdcgrsghpsclqft~nm~~avk~yrwqcieck~--------------- 283 (336)
T KOG1244|consen 222 QPNPYCDFCLGD---SRENKKTGMPEELVSCSDCGRSGHPSCLQFTANMIAAVKTYRWQCIECKY--------------- 283 (336)
T ss_pred cCCcccceeccc---cccccccCCchhhcchhhcCCCCCcchhhhhHHHHHHHHhheeeeeecce---------------
Confidence 345678888752 100 01123568999999999999999973 345667899999974
Q ss_pred cccccccccchhcccchhhhccccccccCCccccccCCCCCCCCCCCCceeecCCCCCccCCCCCCcCcCCcccCCCCCc
Q 002381 610 EAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGK 689 (929)
Q Consensus 610 a~gr~~Gvd~ieqi~krciR~~kd~e~e~~~C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p~~~~~L~elP~g~ 689 (929)
|.+|+.++ +++.||+||-|++.||++||.| +|.+.|+|.
T Consensus 284 -------------------------------csicgtse------nddqllfcddcdrgyhmyclsp----pm~eppegs 322 (336)
T KOG1244|consen 284 -------------------------------CSICGTSE------NDDQLLFCDDCDRGYHMYCLSP----PMVEPPEGS 322 (336)
T ss_pred -------------------------------eccccCcC------CCceeEeecccCCceeeEecCC----CcCCCCCCc
Confidence 99999765 5689999999999999999998 788999999
Q ss_pred ceEcCCCc
Q 002381 690 WFCCMDCS 697 (929)
Q Consensus 690 WfCc~~C~ 697 (929)
|-| .-|-
T Consensus 323 wsc-~KOG 329 (336)
T KOG1244|consen 323 WSC-HLCL 329 (336)
T ss_pred hhH-HHHH
Confidence 999 6663
No 4
>KOG0956 consensus PHD finger protein AF10 [General function prediction only]
Probab=99.04 E-value=1.3e-10 Score=134.70 Aligned_cols=142 Identities=23% Similarity=0.505 Sum_probs=90.5
Q ss_pred CCceEeccC--CCcccccccCCCCCCCCCCcccccccccc-----------cccccccccccc----------ccccccc
Q 002381 559 GGNLLPCDG--CPRAFHKECASLSSIPQGDWYCKYCQNMF-----------ERKRFLQHDANA----------VEAGRVS 615 (929)
Q Consensus 559 gG~Ll~CD~--Cp~aFH~~CL~L~~vP~g~W~Cp~C~~~~-----------~rek~v~~n~n~----------~a~gr~~ 615 (929)
.+.|+.||+ |.-+.|+.|+++.+||.|.|||+.|...- ++.+.++...|. +..=+|.
T Consensus 19 eNPLVYCDG~nCsVAVHQaCYGIvqVPtGpWfCrKCesqeraarvrCeLCP~kdGALKkTDn~GWAHVVCALYIPEVrFg 98 (900)
T KOG0956|consen 19 ENPLVYCDGHNCSVAVHQACYGIVQVPTGPWFCRKCESQERAARVRCELCPHKDGALKKTDNGGWAHVVCALYIPEVRFG 98 (900)
T ss_pred cCceeeecCCCceeeeehhcceeEecCCCchhhhhhhhhhhhccceeecccCcccceecccCCCceEEEEEeeccceeec
Confidence 468999998 99999999999999999999999996431 112222221111 1111233
Q ss_pred cccchhcccchhhhccccccccCCccccccCCCCCCCCCCCCceeecC--CCCCccCCCCCCcCcCCcccCC--CCCcce
Q 002381 616 GVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCD--QCEREFHVGCLKKHKMADLREL--PKGKWF 691 (929)
Q Consensus 616 Gvd~ieqi~krciR~~kd~e~e~~~C~iC~~~dfs~sg~~~~~LL~CD--qCdraYHv~CL~p~~~~~L~el--P~g~Wf 691 (929)
.|..+|+|.-..+.+ +.-...||||.+.+-. .....+..|.|. .|.++||+.|.+..++-.-++. -+.--|
T Consensus 99 NV~TMEPIiLq~VP~----dRfnKtCYIC~E~Grp-nkA~~GACMtCNKs~CkqaFHVTCAQ~~GLLCEE~gn~~dNVKY 173 (900)
T KOG0956|consen 99 NVHTMEPIILQDVPH----DRFNKTCYICNEEGRP-NKAAKGACMTCNKSGCKQAFHVTCAQRAGLLCEEEGNISDNVKY 173 (900)
T ss_pred ccccccceeeccCch----hhhcceeeeecccCCc-cccccccceecccccchhhhhhhHhhhhccceecccccccccee
Confidence 344444443211111 2223569999986421 223456789998 7999999999998775433331 112247
Q ss_pred EcCCCcchhHHHHHh
Q 002381 692 CCMDCSRINSVLQNL 706 (929)
Q Consensus 692 Cc~~C~~i~~~LqkL 706 (929)
| .+|+..+.+|.+-
T Consensus 174 C-GYCk~HfsKlkk~ 187 (900)
T KOG0956|consen 174 C-GYCKYHFSKLKKS 187 (900)
T ss_pred c-hhHHHHHHHhhcC
Confidence 8 8999999998864
No 5
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.02 E-value=2.4e-09 Score=93.94 Aligned_cols=77 Identities=18% Similarity=0.138 Sum_probs=67.0
Q ss_pred eEEEEEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCc
Q 002381 797 MYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGF 876 (929)
Q Consensus 797 fY~~VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF 876 (929)
-+.++++.++++||++.+...++ .+.|..+||+|+|||||+|+.||..+++.+.. ..+++.+.+.+..||.+ +||
T Consensus 3 ~~~~~~~~~~~ivG~~~~~~~~~-~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~---~~i~l~~~~~~~~fY~~-~GF 77 (79)
T PF13508_consen 3 ERFFVAEDDGEIVGFIRLWPNED-FAYIGYLAVDPEYRGKGIGSKLLNYLLEKAKS---KKIFLFTNPAAIKFYEK-LGF 77 (79)
T ss_dssp EEEEEEEETTEEEEEEEEEETTT-EEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTC---SEEEEEEEHHHHHHHHH-TTE
T ss_pred cEEEEEEECCEEEEEEEEEEcCC-EEEEEEEEECHHHcCCCHHHHHHHHHHHHcCC---CcEEEEEcHHHHHHHHH-CcC
Confidence 35677799999999999977665 89999999999999999999999999888854 56778888899999999 999
Q ss_pred EE
Q 002381 877 KK 878 (929)
Q Consensus 877 ~~ 878 (929)
++
T Consensus 78 ~~ 79 (79)
T PF13508_consen 78 EE 79 (79)
T ss_dssp EE
T ss_pred CC
Confidence 85
No 6
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=98.97 E-value=3.2e-09 Score=92.30 Aligned_cols=74 Identities=20% Similarity=0.250 Sum_probs=67.8
Q ss_pred eeCCeEEEEEEEEEeCC-----eeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhh---hHHHHHhcc
Q 002381 803 TVNSSVVSAGILRVFGQ-----EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE---AESIWTDKF 874 (929)
Q Consensus 803 ~~~~~vVsaA~lri~g~-----~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~---a~~~w~~kf 874 (929)
+.+|++||++.+++... ..+.|..++|+++|||||+|+.||+.+++.++..|+..|.+....+ +..||.+ +
T Consensus 2 ~~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g~~~i~~~~~~~n~~~~~~~~k-~ 80 (83)
T PF00583_consen 2 EEDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRGIKRIYLDVSPDNPAARRFYEK-L 80 (83)
T ss_dssp EETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTGHHHHHHHHH-T
T ss_pred cCCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcCccEEEEEEeCCCHHHHHHHHH-c
Confidence 67999999999999886 5999999999999999999999999999999999999998887654 5699998 9
Q ss_pred CcE
Q 002381 875 GFK 877 (929)
Q Consensus 875 GF~ 877 (929)
||+
T Consensus 81 Gf~ 83 (83)
T PF00583_consen 81 GFE 83 (83)
T ss_dssp TEE
T ss_pred CCC
Confidence 996
No 7
>KOG4323 consensus Polycomb-like PHD Zn-finger protein [General function prediction only]
Probab=98.93 E-value=7.4e-10 Score=126.45 Aligned_cols=212 Identities=18% Similarity=0.235 Sum_probs=138.2
Q ss_pred cCCccccccccccccCCcccccCCCCceEeccCCCcccccccCCCCCCCCCCcccccccccccccccccccccccccccc
Q 002381 535 NGLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRV 614 (929)
Q Consensus 535 ~~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~~~~~rek~v~~n~n~~a~gr~ 614 (929)
......|.+|..+... .+.++..|+.|.++||+.|.-......+.|.+..|..........+.. .|+.
T Consensus 80 ~~~e~~~nv~~s~~~~-------p~~e~~~~~r~~~~~~q~~~i~~~~~~~~~~~~~c~~~~~~~~g~a~K-----~g~~ 147 (464)
T KOG4323|consen 80 PSSELNPNVLTSETVL-------PENEKVICGRCKSGYHQGCNIPRFPSLDIGESTECVFPIFSQEGGALK-----KGRL 147 (464)
T ss_pred CccccCCccccccccc-------CchhhhhhhhhccCcccccCccCcCcCCcccccccccccccccccccc-----cccc
Confidence 3456678899864322 466789999999999999985444445679999887653221111111 1111
Q ss_pred cc-ccchhcccchhhhccccccc-cCCccccccCCCCCCCCCCCCceeecCCCCCccCCCCCCcCcCCcccCCCCCcceE
Q 002381 615 SG-VDSVEQITKRCIRIVKNLEA-ELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 692 (929)
Q Consensus 615 ~G-vd~ieqi~krciR~~kd~e~-e~~~C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p~~~~~L~elP~g~WfC 692 (929)
.+ +-.+.. . ....+... -...|.+|....+ + ..+.||+|+.|..|||..|.+|.....+..-|...|||
T Consensus 148 a~~~l~y~~-~----~l~wD~~~~~n~qc~vC~~g~~---~-~~NrmlqC~~C~~~fHq~Chqp~i~~~l~~D~~~~w~C 218 (464)
T KOG4323|consen 148 ARPSLPYPE-A----SLDWDSGHKVNLQCSVCYCGGP---G-AGNRMLQCDKCRQWYHQACHQPLIKDELAGDPFYEWFC 218 (464)
T ss_pred ccccccCcc-c----ccccCccccccceeeeeecCCc---C-ccceeeeecccccHHHHHhccCCCCHhhccCccceEee
Confidence 10 000000 0 00000000 0112888886542 2 34589999999999999999986544444557889999
Q ss_pred cCCCcchhHHHHHhhhhhcccCchhhHH--Hhh--hhhcCccccccccCcceeEcc-CCCCC---hhhHHHHHHHHHhhh
Q 002381 693 CMDCSRINSVLQNLLVQEAEKLPEFHLN--AIK--KYAGNSLETVSDIDVRWRLLS-GKAAT---PETRLLLSQAVAIFH 764 (929)
Q Consensus 693 c~~C~~i~~~LqkLva~g~e~lp~sll~--~Ik--K~~e~gle~~~~~dikW~LLs-gk~~s---~e~~s~La~AL~If~ 764 (929)
..|..-...+.++-.+|++.++..+.+ .+. +++..-+++....+-.|..|. |...+ .+..+.+..|++-..
T Consensus 219 -~~C~~~~~~~~r~t~~~~dv~~lal~~~~~~~~~k~~~~~~ei~~f~e~~~~slp~~e~~tsp~~~~~~~~lsal~~~~ 297 (464)
T KOG4323|consen 219 -DVCNRGPKKVPRLTLRWADVLHLALYNLKPMLKKKYFKSLVEILLFCEESWPSLPFYEPKTSPVTERSSSLLSALSSYK 297 (464)
T ss_pred -hhhccchhhccccccccccccchhhhhhhhhhccCCcccHHHHHHHHhhccccccccCCccccccchhhHHHHhhhccc
Confidence 899999999999999999998877733 333 666665566667778888776 54443 456778888998888
Q ss_pred hcCC
Q 002381 765 DCFD 768 (929)
Q Consensus 765 EcF~ 768 (929)
..|.
T Consensus 298 ~~f~ 301 (464)
T KOG4323|consen 298 SRFV 301 (464)
T ss_pred cccc
Confidence 7774
No 8
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=98.90 E-value=9.7e-09 Score=94.72 Aligned_cols=74 Identities=18% Similarity=0.227 Sum_probs=64.9
Q ss_pred eEEEEEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCc
Q 002381 797 MYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGF 876 (929)
Q Consensus 797 fY~~VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF 876 (929)
...+|++.+|++||.+.++ .-++|..+.|+|+|||+|+|++||..+++.++. |++.|.+.+...|.+||.+ +||
T Consensus 44 ~~~~v~~~~~~ivG~~~~~----~~~~i~~l~v~p~~r~~Gig~~Ll~~~~~~~~~-~~~~l~~~~~~~a~~~y~~-~GF 117 (117)
T PF13673_consen 44 HTIFVAEEGGEIVGFAWLE----PDGEISHLYVLPEYRGRGIGRALLDAAEKEAKD-GIRRLTVEANERARRFYRK-LGF 117 (117)
T ss_dssp CEEEEEEETTEEEEEEEEE----TCEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTT-TCEEEEEEC-HHHHHHHHH-TT-
T ss_pred CEEEEEEECCEEEEEEEEc----CCCeEEEEEEChhhcCCcHHHHHHHHHHHHHHc-CCcEEEEEeCHHHHHHHHh-CCC
Confidence 5667789999999999986 235599999999999999999999999999988 9999999999999999999 998
No 9
>KOG1512 consensus PHD Zn-finger protein [General function prediction only]
Probab=98.88 E-value=4.4e-10 Score=119.84 Aligned_cols=81 Identities=31% Similarity=0.784 Sum_probs=68.6
Q ss_pred CCceEeccCCCcccccccCCCC-----CCCCCCccccccccccccccccccccccccccccccccchhcccchhhhcccc
Q 002381 559 GGNLLPCDGCPRAFHKECASLS-----SIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKN 633 (929)
Q Consensus 559 gG~Ll~CD~Cp~aFH~~CL~L~-----~vP~g~W~Cp~C~~~~~rek~v~~n~n~~a~gr~~Gvd~ieqi~krciR~~kd 633 (929)
.+.+++|..|..++|..|+.+. .+....|.|..|+-
T Consensus 276 ~~S~I~C~~C~~~~HP~Ci~M~~elv~~~KTY~W~C~~C~l--------------------------------------- 316 (381)
T KOG1512|consen 276 RNSWIVCKPCATRPHPYCVAMIPELVGQYKTYFWKCSSCEL--------------------------------------- 316 (381)
T ss_pred hccceeecccccCCCCcchhcCHHHHhHHhhcchhhcccHh---------------------------------------
Confidence 4679999999999999999742 34567899999973
Q ss_pred ccccCCccccccCCCCCCCCCCCCceeecCCCCCccCCCCCCcCcCCcccCCCCCcceEcCCCc
Q 002381 634 LEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS 697 (929)
Q Consensus 634 ~e~e~~~C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p~~~~~L~elP~g~WfCc~~C~ 697 (929)
|.+|++.. .+..+++||.|++.||..|+ .|..+|.|.|.|-..|.
T Consensus 317 -------C~IC~~P~------~E~E~~FCD~CDRG~HT~CV------GL~~lP~G~WICD~~C~ 361 (381)
T KOG1512|consen 317 -------CRICLGPV------IESEHLFCDVCDRGPHTLCV------GLQDLPRGEWICDMRCR 361 (381)
T ss_pred -------hhccCCcc------cchheeccccccCCCCcccc------ccccccCccchhhhHHH
Confidence 99999864 56789999999999999999 58899999999955573
No 10
>PTZ00330 acetyltransferase; Provisional
Probab=98.76 E-value=4.7e-08 Score=93.91 Aligned_cols=83 Identities=14% Similarity=0.207 Sum_probs=72.0
Q ss_pred EEEEEeeCCeEEEEEEEEEeC------CeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHH
Q 002381 798 YCAILTVNSSVVSAGILRVFG------QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWT 871 (929)
Q Consensus 798 Y~~VL~~~~~vVsaA~lri~g------~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~ 871 (929)
+.++...+|++||.+.+.... ...++|-.+.|+++|||+|+|+.||..+++.++..|+.++++.+...|..||+
T Consensus 53 ~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~~~l~l~~n~~a~~~y~ 132 (147)
T PTZ00330 53 RVFVHSPTQRIVGTASLFVEPKFTRGGKCVGHIEDVVVDPSYRGQGLGRALISDLCEIARSSGCYKVILDCTEDMVAFYK 132 (147)
T ss_pred EEEEEeCCCEEEEEEEEEeccccccCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEecChHHHHHHH
Confidence 344555789999999986532 23678889999999999999999999999999999999999999999999999
Q ss_pred hccCcEEcCH
Q 002381 872 DKFGFKKIDP 881 (929)
Q Consensus 872 ~kfGF~~i~~ 881 (929)
+ +||.....
T Consensus 133 k-~GF~~~~~ 141 (147)
T PTZ00330 133 K-LGFRACER 141 (147)
T ss_pred H-CCCEEece
Confidence 9 99998763
No 11
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=98.73 E-value=3.9e-08 Score=94.14 Aligned_cols=80 Identities=14% Similarity=0.091 Sum_probs=68.8
Q ss_pred EEEeeCCeEEEEEEEEEeC-----CeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecCh---hhhHHHHH
Q 002381 800 AILTVNSSVVSAGILRVFG-----QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAA---EEAESIWT 871 (929)
Q Consensus 800 ~VL~~~~~vVsaA~lri~g-----~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~---~~a~~~w~ 871 (929)
+|+..++++||.+.++... ...++|..++|+++|||||+|+.||..+++.++..|...+.|.+. ..|..||+
T Consensus 50 ~v~~~~~~ivG~~~~~~~~~~~~~~~~~~i~~l~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~i~l~~~~~n~~a~~fY~ 129 (144)
T PRK10146 50 HLALLDGEVVGMIGLHLQFHLHHVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHRFYL 129 (144)
T ss_pred EEEEECCEEEEEEEEEecccccccchhheeheeEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHH
Confidence 4567899999999987642 225789899999999999999999999999999999999988765 47999999
Q ss_pred hccCcEEcC
Q 002381 872 DKFGFKKID 880 (929)
Q Consensus 872 ~kfGF~~i~ 880 (929)
+ +||...+
T Consensus 130 ~-~Gf~~~~ 137 (144)
T PRK10146 130 R-EGYEQSH 137 (144)
T ss_pred H-cCCchhh
Confidence 9 9997653
No 12
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=98.72 E-value=7e-08 Score=93.73 Aligned_cols=82 Identities=13% Similarity=0.272 Sum_probs=69.3
Q ss_pred EEEEEee--CCeEEEEEEEEEeC------CeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHH
Q 002381 798 YCAILTV--NSSVVSAGILRVFG------QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESI 869 (929)
Q Consensus 798 Y~~VL~~--~~~vVsaA~lri~g------~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~ 869 (929)
|.++... ++++||.+.+++.. ..++.|.-++|.++|||||+|+.|+..+++.++.+|+++|++....+...|
T Consensus 54 ~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~~~~~N~~~ 133 (150)
T PLN02706 54 LICVIEDAASGRIIATGSVFVERKFIRNCGKVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYKVILDCSEENKAF 133 (150)
T ss_pred EEEEEEeCCCCcEEEEEEEEEEeecccCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccccHHH
Confidence 3444444 68999999886432 256778889999999999999999999999999999999999998888999
Q ss_pred HHhccCcEEcC
Q 002381 870 WTDKFGFKKID 880 (929)
Q Consensus 870 w~~kfGF~~i~ 880 (929)
|.+ +||...+
T Consensus 134 y~k-~GF~~~g 143 (150)
T PLN02706 134 YEK-CGYVRKE 143 (150)
T ss_pred HHH-CcCEEeh
Confidence 998 9999754
No 13
>PLN02825 amino-acid N-acetyltransferase
Probab=98.70 E-value=6.5e-08 Score=113.60 Aligned_cols=104 Identities=21% Similarity=0.304 Sum_probs=85.0
Q ss_pred EEEeeCCeEEEEEEEEEeC-CeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCcEE
Q 002381 800 AILTVNSSVVSAGILRVFG-QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKK 878 (929)
Q Consensus 800 ~VL~~~~~vVsaA~lri~g-~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~~ 878 (929)
+|++.||++||++.+..+. .+.+||-.+||+++|||+|+|++||+.+|+.++++|+++|++.+ ..+..||.+ +||..
T Consensus 410 ~V~e~Dg~IVG~aal~~~~~~~~aEI~~laV~P~yRGkGiG~~LL~~le~~Ar~~G~~~L~Llt-t~a~~fY~k-~GF~~ 487 (515)
T PLN02825 410 VVVEREGSIIACAALFPFFEEKCGEVAAIAVSPECRGQGQGDKLLDYIEKKAASLGLEKLFLLT-TRTADWFVR-RGFSE 487 (515)
T ss_pred EEEEECCEEEEEEEEEeecCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEe-CcHHHHHHH-CCCEE
Confidence 3568999999999987765 46899999999999999999999999999999999999999876 467788887 99999
Q ss_pred cCHHHHHHHHHhCCceeeeCCCeeeeecc
Q 002381 879 IDPELLSIYRKRCSQLVTFKGTSMLQKRV 907 (929)
Q Consensus 879 i~~~~l~~~~~~~~~ll~F~gt~~L~K~l 907 (929)
.+.+++..-|+..++.- .+.-.+-|.|
T Consensus 488 ~~~~~lp~~~~~~yn~~--r~sk~~~k~l 514 (515)
T PLN02825 488 CSIESLPEARRKRINLS--RGSKYYMKKL 514 (515)
T ss_pred eChhhCCHHHHhhcCcc--CCcEEEEEec
Confidence 99988877776533321 4444455544
No 14
>PF15446 zf-PHD-like: PHD/FYVE-zinc-finger like domain
Probab=98.69 E-value=1.7e-08 Score=101.48 Aligned_cols=133 Identities=19% Similarity=0.378 Sum_probs=83.8
Q ss_pred ccccccccccCCcccccCCCCceEeccCCCcccccccCCC--------CCCCCCC--ccccccccccccccccccccccc
Q 002381 540 ICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASL--------SSIPQGD--WYCKYCQNMFERKRFLQHDANAV 609 (929)
Q Consensus 540 ~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L--------~~vP~g~--W~Cp~C~~~~~rek~v~~n~n~~ 609 (929)
.|..|......+ ..|.||+|.||-.+||..||+. +.|.++. .+|..|..-.++++..++.....
T Consensus 1 ~C~~C~~~g~~~------~kG~Lv~CQGCs~sYHk~CLG~Rs~ReHlVTKVg~d~FVLQCr~Cig~~~kKD~~aP~~~~C 74 (175)
T PF15446_consen 1 TCDTCGYEGDDR------NKGPLVYCQGCSSSYHKACLGPRSQREHLVTKVGDDDFVLQCRRCIGIAHKKDPRAPHHGMC 74 (175)
T ss_pred CcccccCCCCCc------cCCCeEEcCccChHHHhhhcCCccccceeeEEEcCCceEEechhhcChhhcccCCCCCCCcc
Confidence 377786432221 4789999999999999999972 3455544 78999988777777777766655
Q ss_pred cccccccccchhcccchhhhccccccccCCccccccCCCCCCCCCCCCceeecCCCCCccCCCCCCcCc
Q 002381 610 EAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHK 678 (929)
Q Consensus 610 a~gr~~Gvd~ieqi~krciR~~kd~e~e~~~C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p~~ 678 (929)
......|......-.....+.++....++++=...-..+....+..++.|+.|..|.++||...|++.+
T Consensus 75 ~~C~~~G~~c~pfr~r~T~kQEe~~ReeNgG~DPit~Vd~~lvnN~~nVLFRC~~C~RawH~~HLP~~~ 143 (175)
T PF15446_consen 75 QQCKKPGPSCKPFRPRKTPKQEEKLREENGGVDPITPVDPELVNNPDNVLFRCTSCHRAWHFEHLPPPS 143 (175)
T ss_pred cccCCCCCCCcccCCCCCcHHHHHHHHHcCCCCCCccCCHHHccChhheEEecCCccceeehhhCCCCc
Confidence 555555544332222222233333333333333333333333334567789999999999999998853
No 15
>PRK07922 N-acetylglutamate synthase; Validated
Probab=98.68 E-value=8.4e-08 Score=96.95 Aligned_cols=79 Identities=20% Similarity=0.323 Sum_probs=70.9
Q ss_pred EEEe-eCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCcEE
Q 002381 800 AILT-VNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKK 878 (929)
Q Consensus 800 ~VL~-~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~~ 878 (929)
++++ .++++||.+.+.+...+.++|..++|+++|||+|+|+.||+++++.+++.|++++++... +..||++ +||+.
T Consensus 48 ~va~~~~~~iiG~~~~~~~~~~~~~i~~l~V~p~~rgkGiG~~Ll~~~~~~a~~~g~~~l~~~~~--~~~fY~k-~GF~~ 124 (169)
T PRK07922 48 WVAEHLDGEVVGCGALHVMWEDLAEIRTVAVDPAARGRGVGHAIVERLLDVARELGLSRVFVLTF--EVEFFAR-HGFVE 124 (169)
T ss_pred EEEEecCCcEEEEEEEeecCCCceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCCEEEEEec--cHHHHHH-CCCEE
Confidence 3556 889999999998878889999999999999999999999999999999999999987654 4789999 99999
Q ss_pred cCH
Q 002381 879 IDP 881 (929)
Q Consensus 879 i~~ 881 (929)
++.
T Consensus 125 ~~~ 127 (169)
T PRK07922 125 IDG 127 (169)
T ss_pred Ccc
Confidence 875
No 16
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=98.68 E-value=6e-08 Score=107.00 Aligned_cols=74 Identities=15% Similarity=0.201 Sum_probs=67.5
Q ss_pred EEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCcEEcC
Q 002381 801 ILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKID 880 (929)
Q Consensus 801 VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~~i~ 880 (929)
|...++++||++++.. .+|..|||+++|||||+|+.||..+++.++..|+++++|.+..++.+||++ +||..++
T Consensus 10 v~~~~~~iVG~~~l~~-----~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~i~L~t~~~~~~fYek-~GF~~~~ 83 (297)
T cd02169 10 IFDDAGELIATGSIAG-----NVLKCVAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLFTKPKNAKFFRG-LGFKELA 83 (297)
T ss_pred EEEECCEEEEEEEecc-----CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccHHHHHHH-CCCEEec
Confidence 3356799999998842 368999999999999999999999999999999999999999999999997 9999988
No 17
>PRK07757 acetyltransferase; Provisional
Probab=98.67 E-value=9e-08 Score=93.14 Aligned_cols=81 Identities=21% Similarity=0.325 Sum_probs=71.8
Q ss_pred EEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCcEEcC
Q 002381 801 ILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKID 880 (929)
Q Consensus 801 VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~~i~ 880 (929)
++..+|++||.+.+.+.+.+.++|-.|+|+++|||+|+|+.|+..+++.+...|+.++++... +..||.+ +||+.++
T Consensus 45 i~~~~~~lvG~~~l~~~~~~~~~i~~v~V~p~~rg~Glg~~Ll~~l~~~a~~~g~~~i~~~~~--~~~~Y~k-~GF~~~~ 121 (152)
T PRK07757 45 VAEEEGEIVGCCALHILWEDLAEIRSLAVSEDYRGQGIGRMLVEACLEEARELGVKRVFALTY--QPEFFEK-LGFREVD 121 (152)
T ss_pred EEEECCEEEEEEEEEeccCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCeEEEEeC--cHHHHHH-CCCEEcc
Confidence 446789999999999988889999999999999999999999999999999999999876543 4689999 9999998
Q ss_pred HHHH
Q 002381 881 PELL 884 (929)
Q Consensus 881 ~~~l 884 (929)
..++
T Consensus 122 ~~~~ 125 (152)
T PRK07757 122 KEAL 125 (152)
T ss_pred cccC
Confidence 8544
No 18
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=98.66 E-value=1.8e-07 Score=88.07 Aligned_cols=111 Identities=22% Similarity=0.271 Sum_probs=80.5
Q ss_pred HHHHHHhhhhcCCCcccCCCCCCccccccccccCCCceecceEEEEEeeCCeEEEEEEEEEe-----CC--eeEEEeeeE
Q 002381 756 LSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVF-----GQ--EVAELPLVA 828 (929)
Q Consensus 756 La~AL~If~EcF~PiiD~rSgrDLIp~MVy~~~~~~~~f~GfY~~VL~~~~~vVsaA~lri~-----g~--~~AElplVA 828 (929)
+.+..+++.++|.+-.++. ..+.|..+. +..-++++.+.++++||.+.+... |. .++.|--||
T Consensus 10 ~~~i~~l~~~~F~~~~~~~------~~~~~~~~~----~~~~~~~~~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~ 79 (127)
T PF13527_consen 10 FEQIIELFNEAFGDSESPP------EIWEYFRNL----YGPGRCVVAEDDGKIVGHVGLIPRRLSVGGKKFKAAYIGDVA 79 (127)
T ss_dssp HHHHHHHHHHHTTT-CHHH------HHHHHHHHH----HHTTEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHCCCCCCch------hhhhhhhcc----cCcCcEEEEEECCEEEEEEEEEEEEEEECCEEEEEEEEEEEE
Confidence 4567778889995543332 222332221 111256777889999998877554 43 579999999
Q ss_pred eecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCcEEc
Q 002381 829 TSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKI 879 (929)
Q Consensus 829 T~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~~i 879 (929)
|+|+|||||+|+.||.++++.++..|+..+++.+ ...+||.+ |||+.+
T Consensus 80 v~p~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l~~--~~~~~Y~~-~G~~~~ 127 (127)
T PF13527_consen 80 VDPEYRGRGLGRQLMRALLERARERGVPFIFLFP--SSPPFYRR-FGFEYA 127 (127)
T ss_dssp E-GGGTTSSHHHHHHHHHHHHHHHTT-SEEEEE---SSHHHHHH-TTEEEE
T ss_pred ECHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEec--CChhhhhc-CCCEEC
Confidence 9999999999999999999999999999999887 34789988 999864
No 19
>PRK03624 putative acetyltransferase; Provisional
Probab=98.64 E-value=1.1e-07 Score=89.38 Aligned_cols=82 Identities=20% Similarity=0.167 Sum_probs=68.7
Q ss_pred EEEEEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecCh---hhhHHHHHhcc
Q 002381 798 YCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAA---EEAESIWTDKF 874 (929)
Q Consensus 798 Y~~VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~---~~a~~~w~~kf 874 (929)
+.+++..++++||.+.+...+ ..+.+..++|+++|||||+|+.|+..+++.++.+|++++.+.+. ..+..+|.+ +
T Consensus 46 ~~~v~~~~~~~vG~~~~~~~~-~~~~i~~i~v~p~~rg~Gig~~ll~~~~~~~~~~~~~~~~~~~~~~N~~~~~~y~k-~ 123 (140)
T PRK03624 46 LFLVAEVGGEVVGTVMGGYDG-HRGWAYYLAVHPDFRGRGIGRALVARLEKKLIARGCPKINLQVREDNDAVLGFYEA-L 123 (140)
T ss_pred eEEEEEcCCcEEEEEEeeccC-CCceEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHH-c
Confidence 445667889999999876543 45678889999999999999999999999999999999887654 357889988 9
Q ss_pred CcEEcCH
Q 002381 875 GFKKIDP 881 (929)
Q Consensus 875 GF~~i~~ 881 (929)
||+..+.
T Consensus 124 GF~~~~~ 130 (140)
T PRK03624 124 GYEEQDR 130 (140)
T ss_pred CCccccE
Confidence 9997664
No 20
>KOG0825 consensus PHD Zn-finger protein [General function prediction only]
Probab=98.59 E-value=2.6e-08 Score=117.20 Aligned_cols=53 Identities=40% Similarity=0.932 Sum_probs=46.1
Q ss_pred ccCCccccccCCCCCCCCCCCCceeecCCCCCc-cCCCCCCcCcCCcccCCCCCcceEcCCCcch
Q 002381 636 AELSGCLLCRGCDFSKSGFGPRTILLCDQCERE-FHVGCLKKHKMADLRELPKGKWFCCMDCSRI 699 (929)
Q Consensus 636 ~e~~~C~iC~~~dfs~sg~~~~~LL~CDqCdra-YHv~CL~p~~~~~L~elP~g~WfCc~~C~~i 699 (929)
.+...|.+|..+| .++.||+||.|+.. ||++||+| +|.++|-+.||| .+|.-+
T Consensus 213 ~E~~~C~IC~~~D------pEdVLLLCDsCN~~~YH~YCLDP----dl~eiP~~eWYC-~NC~dL 266 (1134)
T KOG0825|consen 213 QEEVKCDICTVHD------PEDVLLLCDSCNKVYYHVYCLDP----DLSESPVNEWYC-TNCSLL 266 (1134)
T ss_pred cccccceeeccCC------hHHhheeecccccceeeccccCc----ccccccccceec-Ccchhh
Confidence 3445699999886 57889999999998 99999998 899999999999 899754
No 21
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=98.58 E-value=2.3e-07 Score=106.81 Aligned_cols=86 Identities=16% Similarity=0.264 Sum_probs=74.5
Q ss_pred EEeeCCeEEEEEEEEEeC-CeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCcEEc
Q 002381 801 ILTVNSSVVSAGILRVFG-QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKI 879 (929)
Q Consensus 801 VL~~~~~vVsaA~lri~g-~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~~i 879 (929)
|++.++++||++.+..+. .+.++|-.++|+++|||||+|++||+.+++.+++.|.++|++.+. .+..||.+ +||+.+
T Consensus 326 V~~~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~~G~~~l~v~~~-~a~~fY~k-~GF~~~ 403 (429)
T TIGR01890 326 IIEHDGNIIGCAALYPYAEEDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFVLTT-RTGHWFRE-RGFQTA 403 (429)
T ss_pred EEEECCEEEEEEEEEecCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEeec-chHHHHHH-CCCEEC
Confidence 457899999999998874 468999999999999999999999999999999999999887654 56789988 999999
Q ss_pred CHHHHHHHH
Q 002381 880 DPELLSIYR 888 (929)
Q Consensus 880 ~~~~l~~~~ 888 (929)
+..++..-+
T Consensus 404 g~~~l~~~~ 412 (429)
T TIGR01890 404 SVDELPEAR 412 (429)
T ss_pred ChhhCCHHH
Confidence 987654443
No 22
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=98.53 E-value=4.9e-07 Score=84.11 Aligned_cols=80 Identities=18% Similarity=0.218 Sum_probs=68.5
Q ss_pred EEEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEec---ChhhhHHHHHhccCc
Q 002381 800 AILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLP---AAEEAESIWTDKFGF 876 (929)
Q Consensus 800 ~VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLp---A~~~a~~~w~~kfGF 876 (929)
++++.++++||.+.++... ....+-.++|+++|||||+|+.|+.++++.+...|..++++. ....+..||++ +||
T Consensus 34 ~~~~~~~~~vg~~~~~~~~-~~~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~i~~~~~~~n~~~~~~y~~-~Gf 111 (131)
T TIGR01575 34 LLARIGGKVVGYAGVQIVL-DEAHILNIAVKPEYQGQGIGRALLRELIDEAKGRGVNEIFLEVRVSNIAAQALYKK-LGF 111 (131)
T ss_pred EEEecCCeEEEEEEEEecC-CCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCeEEEEEecccHHHHHHHHH-cCC
Confidence 3445689999999987644 457888899999999999999999999999999999999884 45567899999 999
Q ss_pred EEcCH
Q 002381 877 KKIDP 881 (929)
Q Consensus 877 ~~i~~ 881 (929)
+.++.
T Consensus 112 ~~~~~ 116 (131)
T TIGR01575 112 NEIAI 116 (131)
T ss_pred Ccccc
Confidence 98865
No 23
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=98.52 E-value=4.5e-07 Score=92.77 Aligned_cols=84 Identities=12% Similarity=0.062 Sum_probs=71.1
Q ss_pred eEEEEEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecCh---hhhHHHHHhc
Q 002381 797 MYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAA---EEAESIWTDK 873 (929)
Q Consensus 797 fY~~VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~---~~a~~~w~~k 873 (929)
++.++...++++||.+.+...+...++|-.++|.++|||||+|+.|+..+++.+...|+.++++... ..+..||++
T Consensus 102 ~~~v~~~~~g~~vG~~~l~~~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~yek- 180 (194)
T PRK10975 102 QCLLLRDASGQIQGFVTLRELNDTDARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLTRLRVATQMGNLAALRLYIR- 180 (194)
T ss_pred cEEEEEcCCCCEEEEEEEEecCCCceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHHH-
Confidence 3433444678999999998776677999999999999999999999999999999999999987644 457899988
Q ss_pred cCcEEcCH
Q 002381 874 FGFKKIDP 881 (929)
Q Consensus 874 fGF~~i~~ 881 (929)
+||...+.
T Consensus 181 ~Gf~~~~~ 188 (194)
T PRK10975 181 SGANIEST 188 (194)
T ss_pred CCCeEeEE
Confidence 99997653
No 24
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=98.52 E-value=3.2e-07 Score=102.76 Aligned_cols=81 Identities=17% Similarity=0.213 Sum_probs=72.8
Q ss_pred eEEEEEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCc
Q 002381 797 MYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGF 876 (929)
Q Consensus 797 fY~~VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF 876 (929)
-|+++++.+|++||+|++ .|. .|..|||+++|||+|+|+.||..+++.+.+.|+..++|.+.+....||++ +||
T Consensus 31 d~~vv~~~~~~lVg~g~l--~g~---~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G~~~l~l~Tk~~~~~fy~k-lGF 104 (332)
T TIGR00124 31 EIFIAVYEDEEIIGCGGI--AGN---VIKCVAIDESLRGEGLALQLMTELENLAYELGRFHLFIFTKPEYAALFEY-CGF 104 (332)
T ss_pred CEEEEEEECCEEEEEEEE--ecC---EEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEECchHHHHHHH-cCC
Confidence 567778899999999997 342 48899999999999999999999999999999999999999999999988 999
Q ss_pred EEcCHHH
Q 002381 877 KKIDPEL 883 (929)
Q Consensus 877 ~~i~~~~ 883 (929)
..+....
T Consensus 105 ~~i~~~~ 111 (332)
T TIGR00124 105 KTLAEAK 111 (332)
T ss_pred EEeeeec
Confidence 9988643
No 25
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=98.51 E-value=4.6e-07 Score=92.69 Aligned_cols=80 Identities=11% Similarity=0.031 Sum_probs=69.9
Q ss_pred EEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecC---hhhhHHHHHhccCcE
Q 002381 801 ILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPA---AEEAESIWTDKFGFK 877 (929)
Q Consensus 801 VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA---~~~a~~~w~~kfGF~ 877 (929)
+...+|++||.+.++......++|-.+++.++|||||+|+.|+.++++.+..+|+.+|.+.. -..|..||.+ +||+
T Consensus 103 ~~~~~g~iiG~i~l~~~~~~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~g~~~I~l~v~~~N~~A~~~Y~k-lGF~ 181 (191)
T TIGR02382 103 LRDASGDPRGYVTLRELNDTDARIGLLAVFPGAQSRGIGAELMQTALNWCYARGLTRLRVATQMGNTAALRLYIR-SGAN 181 (191)
T ss_pred EEccCCeEEEEEEEEecCCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHH-cCCc
Confidence 34568999999999877666789999999999999999999999999999999999999874 3458999998 9998
Q ss_pred EcCH
Q 002381 878 KIDP 881 (929)
Q Consensus 878 ~i~~ 881 (929)
..+.
T Consensus 182 ~~~~ 185 (191)
T TIGR02382 182 IEST 185 (191)
T ss_pred cccc
Confidence 7654
No 26
>KOG0955 consensus PHD finger protein BR140/LIN-49 [General function prediction only]
Probab=98.50 E-value=7.3e-08 Score=119.42 Aligned_cols=127 Identities=23% Similarity=0.567 Sum_probs=84.9
Q ss_pred CCccccccccccccCCcccccCCCCceEeccCCCcccccccCCCCCCCCCCccccccccccccccccccccccccccccc
Q 002381 536 GLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVS 615 (929)
Q Consensus 536 ~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~~~~~rek~v~~n~n~~a~gr~~ 615 (929)
..+.+|.+|.+-.+- ....+++||+|..++|+.|+++..+|+|.|+|..|....++. +....+....|++.
T Consensus 217 ~~D~~C~iC~~~~~~-------n~n~ivfCD~Cnl~VHq~Cygi~~ipeg~WlCr~Cl~s~~~~--v~c~~cp~~~gAFk 287 (1051)
T KOG0955|consen 217 EEDAVCCICLDGECQ-------NSNVIVFCDGCNLAVHQECYGIPFIPEGQWLCRRCLQSPQRP--VRCLLCPSKGGAFK 287 (1051)
T ss_pred CCCccceeecccccC-------CCceEEEcCCCcchhhhhccCCCCCCCCcEeehhhccCcCcc--cceEeccCCCCcce
Confidence 567899999963211 356899999999999999999999999999999998654432 33333334445544
Q ss_pred cccc-----------hhcccc---------hhhhccccccccCCccccccCCCCCCCCCCCCceeecC--CCCCccCCCC
Q 002381 616 GVDS-----------VEQITK---------RCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCD--QCEREFHVGC 673 (929)
Q Consensus 616 Gvd~-----------ieqi~k---------rciR~~kd~e~e~~~C~iC~~~dfs~sg~~~~~LL~CD--qCdraYHv~C 673 (929)
.++. ++++.- ..++.... ......|++|+.. +.+..|+|. .|-.+||++|
T Consensus 288 qt~dgrw~Hv~caiwipev~F~nt~~~E~I~~i~~i~~-aRwkL~cy~cK~~-------~~gaciqcs~~~c~~a~hvtc 359 (1051)
T KOG0955|consen 288 QTDDGRWAHVVCAIWIPEVSFANTVFLEPIDSIENIPP-ARWKLTCYICKQK-------GLGACIQCSKANCYTAFHVTC 359 (1051)
T ss_pred eccCCceeeeehhhcccccccccchhhccccchhcCcH-hhhhceeeeeccC-------CCCcceecchhhhhhhhhhhh
Confidence 4431 111110 01111111 1233469999974 257889998 6999999999
Q ss_pred CCcCcC
Q 002381 674 LKKHKM 679 (929)
Q Consensus 674 L~p~~~ 679 (929)
.+..|+
T Consensus 360 a~~agl 365 (1051)
T KOG0955|consen 360 ARRAGL 365 (1051)
T ss_pred HhhcCc
Confidence 988764
No 27
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=98.50 E-value=2.8e-07 Score=91.26 Aligned_cols=86 Identities=23% Similarity=0.215 Sum_probs=73.2
Q ss_pred EEEEEeeCCeEEEEEEEEEeCCeeEE--EeeeEeecCccCCChhHHHHHHHHHHhhhcC-ccEEEecChhhhHHHHHhcc
Q 002381 798 YCAILTVNSSVVSAGILRVFGQEVAE--LPLVATSKINHGKGYFQLLFACIEKLLSFLR-VKSIVLPAAEEAESIWTDKF 874 (929)
Q Consensus 798 Y~~VL~~~~~vVsaA~lri~g~~~AE--lplVAT~~~yRgqG~gr~L~~~IE~~l~~lg-V~~LvLpA~~~a~~~w~~kf 874 (929)
.-++...+|++|++|+|-..+.+..+ |.+|+|.+++||+|+|+.||....+.+.... =+.+.|.|+..++.||.. |
T Consensus 51 Hl~~~~~~g~LvAyaRLl~~~~~~~~~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQahLq~fYa~-~ 129 (155)
T COG2153 51 HLLGWTPDGELVAYARLLPPGAEYEEVSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGAQAHLQDFYAS-F 129 (155)
T ss_pred eEEEEcCCCeEEEEEecCCCCCCcCceeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeEEehHHHHHHHHHH-h
Confidence 33333449999999999887776666 9999999999999999999998877777666 567999999999999999 9
Q ss_pred CcEEcCHHHH
Q 002381 875 GFKKIDPELL 884 (929)
Q Consensus 875 GF~~i~~~~l 884 (929)
||.+.+++-+
T Consensus 130 GFv~~~e~yl 139 (155)
T COG2153 130 GFVRVGEEYL 139 (155)
T ss_pred CcEEcCchhh
Confidence 9999998643
No 28
>KOG4299 consensus PHD Zn-finger protein [General function prediction only]
Probab=98.50 E-value=8.5e-08 Score=112.08 Aligned_cols=58 Identities=33% Similarity=0.840 Sum_probs=44.7
Q ss_pred cccccccCCc--cccccccccccCCcccccCCCCceEeccCCCcccccccCC----CCCCCCCCccccccccc
Q 002381 529 LLEGYKNGLG--IICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECAS----LSSIPQGDWYCKYCQNM 595 (929)
Q Consensus 529 ll~G~~~~~~--i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~----L~~vP~g~W~Cp~C~~~ 595 (929)
..++++.-.. ++|..|++.. .| .++++||+||++||+.||+ .+.+|.|.|+|+.|...
T Consensus 242 ~~D~~~~~~~~~~fCsaCn~~~---~F------~~~i~CD~Cp~sFH~~CLePPl~~eniP~g~W~C~ec~~k 305 (613)
T KOG4299|consen 242 ERDKNISVEDIEDFCSACNGSG---LF------NDIICCDGCPRSFHQTCLEPPLEPENIPPGSWFCPECKIK 305 (613)
T ss_pred hhccccccCCHHHHHHHhCCcc---cc------ccceeecCCchHHHHhhcCCCCCcccCCCCccccCCCeee
Confidence 3445554444 4999999621 11 4569999999999999996 56899999999999765
No 29
>COG5141 PHD zinc finger-containing protein [General function prediction only]
Probab=98.50 E-value=5.7e-08 Score=110.02 Aligned_cols=128 Identities=24% Similarity=0.554 Sum_probs=79.0
Q ss_pred CccccccccccccCCcccccC-CCCceEeccCCCcccccccCCCCCCCCCCccccccccccccccccccccccccccccc
Q 002381 537 LGIICHCCNSEVSPSQFEAHA-DGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVS 615 (929)
Q Consensus 537 ~~i~C~~C~~~vSpS~FE~ha-dgG~Ll~CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~~~~~rek~v~~n~n~~a~gr~~ 615 (929)
-+..|.+|.+. |. +.+.+++||+|.-+.|+.|+++.-+|+|.|+|..|.-..+. ...........|.+.
T Consensus 192 ~d~~C~~c~~t--------~~eN~naiVfCdgC~i~VHq~CYGI~f~peG~WlCrkCi~~~~~--i~~C~fCps~dGaFk 261 (669)
T COG5141 192 FDDICTKCTST--------HNENSNAIVFCDGCEICVHQSCYGIQFLPEGFWLCRKCIYGEYQ--IRCCSFCPSSDGAFK 261 (669)
T ss_pred hhhhhHhcccc--------ccCCcceEEEecCcchhhhhhcccceecCcchhhhhhhcccccc--eeEEEeccCCCCcee
Confidence 45678888853 22 45789999999999999999999999999999999643110 000111112233333
Q ss_pred cccch-----------hcccch------hhhccccc--cccCCccccccCCCCCCCCCCCCceeecC--CCCCccCCCCC
Q 002381 616 GVDSV-----------EQITKR------CIRIVKNL--EAELSGCLLCRGCDFSKSGFGPRTILLCD--QCEREFHVGCL 674 (929)
Q Consensus 616 Gvd~i-----------eqi~kr------ciR~~kd~--e~e~~~C~iC~~~dfs~sg~~~~~LL~CD--qCdraYHv~CL 674 (929)
.++.. .++.-. -++.++.. ..+..+|.+|+.. .++.|+|. .|-++||++|.
T Consensus 262 qT~dgrW~H~iCA~~~pelsF~~l~~~dpI~~i~sVs~srwkl~C~iCk~~--------~GtcIqCs~~nC~~aYHVtCA 333 (669)
T COG5141 262 QTSDGRWGHVICAMFNPELSFGHLLSKDPIDNIASVSSSRWKLGCLICKEF--------GGTCIQCSYFNCTRAYHVTCA 333 (669)
T ss_pred eccCCchHhHhHHHhcchhccccccccchhhhhcccchhhHhheeeEEccc--------Ccceeeecccchhhhhhhhhh
Confidence 33210 111000 00111111 1223469999974 57999998 59999999999
Q ss_pred CcCcCCcc
Q 002381 675 KKHKMADL 682 (929)
Q Consensus 675 ~p~~~~~L 682 (929)
...+.-.+
T Consensus 334 rrag~f~~ 341 (669)
T COG5141 334 RRAGYFDL 341 (669)
T ss_pred hhcchhhh
Confidence 88765444
No 30
>PRK05279 N-acetylglutamate synthase; Validated
Probab=98.47 E-value=6.1e-07 Score=103.62 Aligned_cols=87 Identities=17% Similarity=0.263 Sum_probs=74.3
Q ss_pred EEEeeCCeEEEEEEEEEeC-CeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCcEE
Q 002381 800 AILTVNSSVVSAGILRVFG-QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKK 878 (929)
Q Consensus 800 ~VL~~~~~vVsaA~lri~g-~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~~ 878 (929)
++++.++++||++.+..+. ...++|-.++|+++|||||+|++||+.+++.++..|+.++++.+ ..|..||.+ +||+.
T Consensus 337 ~va~~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~l~l~~-~~a~~fY~k-~GF~~ 414 (441)
T PRK05279 337 TVIERDGLIIGCAALYPFPEEKMGEMACLAVHPDYRGSGRGERLLKRIEQRARQLGLKRLFVLT-TRTAHWFLE-RGFVP 414 (441)
T ss_pred EEEEECCEEEEEEEEEEcCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEec-chHHHHHHH-CcCEE
Confidence 3557899999999877654 36899999999999999999999999999999999999998765 468899988 99999
Q ss_pred cCHHHHHHHH
Q 002381 879 IDPELLSIYR 888 (929)
Q Consensus 879 i~~~~l~~~~ 888 (929)
++.+++..-+
T Consensus 415 ~g~~~~~~~~ 424 (441)
T PRK05279 415 VDVDDLPEAK 424 (441)
T ss_pred CChhhCcHHH
Confidence 9986654433
No 31
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=98.46 E-value=1.2e-06 Score=84.96 Aligned_cols=85 Identities=20% Similarity=0.190 Sum_probs=71.1
Q ss_pred cceEEEEEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecC---hhhhHHHHH
Q 002381 795 GGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPA---AEEAESIWT 871 (929)
Q Consensus 795 ~GfY~~VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA---~~~a~~~w~ 871 (929)
.+++.+++..++++||.+.++.... .+++-.++|.++|||||+|+.|+..+++.+...|+..+++.+ -..+..+|+
T Consensus 38 ~~~~~~~~~~~~~~vG~~~~~~~~~-~~~~~~i~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~~~~~~~~~N~~a~~~y~ 116 (146)
T PRK09491 38 ERYLNLKLTVNGQMAAFAITQVVLD-EATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYE 116 (146)
T ss_pred cCceEEEEEECCeEEEEEEEEeecC-ceEEEEEEECHHHccCCHHHHHHHHHHHHHHHCCCcEEEEEEccCCHHHHHHHH
Confidence 3455556678899999999876654 466788999999999999999999999999999999988753 456889999
Q ss_pred hccCcEEcCH
Q 002381 872 DKFGFKKIDP 881 (929)
Q Consensus 872 ~kfGF~~i~~ 881 (929)
+ +||+..+.
T Consensus 117 k-~Gf~~~~~ 125 (146)
T PRK09491 117 S-LGFNEVTI 125 (146)
T ss_pred H-cCCEEeee
Confidence 9 99998775
No 32
>KOG0954 consensus PHD finger protein [General function prediction only]
Probab=98.45 E-value=1.2e-07 Score=111.73 Aligned_cols=154 Identities=23% Similarity=0.477 Sum_probs=95.7
Q ss_pred ccccCCccccccccccccCCcccccCCCCceEeccCCCcccccccCCCCCCCCCCcccccccccccccccccccccccc-
Q 002381 532 GYKNGLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVE- 610 (929)
Q Consensus 532 G~~~~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~~~~~rek~v~~n~n~~a- 610 (929)
|+...++..|.+|....+. ++.+|++||.|.-..|+.|+++..+|+|.|.|..|.-.+++.-.+.++....-
T Consensus 265 gie~dedviCDvCrspD~e-------~~neMVfCd~Cn~cVHqaCyGIle~p~gpWlCr~Calg~~ppCvLCPkkGGamK 337 (893)
T KOG0954|consen 265 GIEYDEDVICDVCRSPDSE-------EANEMVFCDKCNICVHQACYGILEVPEGPWLCRTCALGIEPPCVLCPKKGGAMK 337 (893)
T ss_pred eeeccccceeceecCCCcc-------ccceeEEeccchhHHHHhhhceeecCCCCeeehhccccCCCCeeeccccCCccc
Confidence 4555688899999964332 57899999999999999999999999999999999766544333332222110
Q ss_pred ---cc-ccccc---cchhcccchhhhccccc--------cccCCccccccCCCCCCCCCCCCceeecC--CCCCccCCCC
Q 002381 611 ---AG-RVSGV---DSVEQITKRCIRIVKNL--------EAELSGCLLCRGCDFSKSGFGPRTILLCD--QCEREFHVGC 673 (929)
Q Consensus 611 ---~g-r~~Gv---d~ieqi~krciR~~kd~--------e~e~~~C~iC~~~dfs~sg~~~~~LL~CD--qCdraYHv~C 673 (929)
.| ....+ .||.++...|....+.+ ......|.+|+.. -+..|+|. .|...||+.|
T Consensus 338 ~~~sgT~wAHvsCALwIPEVsie~~ekmePItkfs~IpesRwslvC~LCk~k--------~GACIqCs~k~C~t~fHv~C 409 (893)
T KOG0954|consen 338 PTKSGTKWAHVSCALWIPEVSIECPEKMEPITKFSHIPESRWSLVCNLCKVK--------SGACIQCSNKTCRTAFHVTC 409 (893)
T ss_pred ccCCCCeeeEeeeeeccceeeccCHhhcCcccccCCCcHHHHHHHHHHhccc--------CcceEEecccchhhhccchh
Confidence 00 01111 13333332222211111 1122349999863 36788997 8999999999
Q ss_pred CCcCcCCcc---cCC--CCCcceEcCCCcchhH
Q 002381 674 LKKHKMADL---REL--PKGKWFCCMDCSRINS 701 (929)
Q Consensus 674 L~p~~~~~L---~el--P~g~WfCc~~C~~i~~ 701 (929)
...+|+..- .+. -...-|| ..|..+.+
T Consensus 410 A~~aG~~~~~~~~~~D~v~~~s~c-~khs~~~~ 441 (893)
T KOG0954|consen 410 AFEAGLEMKTILKENDEVKFKSYC-SKHSDHRE 441 (893)
T ss_pred hhhcCCeeeeeeccCCchhheeec-cccccccc
Confidence 998875311 111 1235678 66665553
No 33
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=98.44 E-value=5.6e-07 Score=108.20 Aligned_cols=82 Identities=15% Similarity=0.203 Sum_probs=73.5
Q ss_pred EEEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCcEEc
Q 002381 800 AILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKI 879 (929)
Q Consensus 800 ~VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~~i 879 (929)
+|++.+|++||.+.+.....+.++|-.++|+|+|||||+|+.||+.+++.++..|++.|++.+. +..||++ +||+..
T Consensus 506 ~Va~~~g~IVG~~~l~~~~~~~~~I~~i~V~P~~rGkGIGk~Ll~~l~~~ak~~g~~~i~l~~~--a~~FYek-~GF~~~ 582 (614)
T PRK12308 506 AVAEHHGEVTGCASLYIYDSGLAEIRSLGVEAGWQVQGQGSALVQYLVEKARQMAIKKVFVLTR--VPEFFMK-QGFSPT 582 (614)
T ss_pred EEEEECCEEEEEEEEEEcCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEeeC--cHHHHHH-CCCEEC
Confidence 4567899999999998877778999999999999999999999999999999999999988653 5789998 999999
Q ss_pred CHHHH
Q 002381 880 DPELL 884 (929)
Q Consensus 880 ~~~~l 884 (929)
+...+
T Consensus 583 ~~~~~ 587 (614)
T PRK12308 583 SKSLL 587 (614)
T ss_pred CcccC
Confidence 98664
No 34
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=98.42 E-value=7.8e-07 Score=96.05 Aligned_cols=84 Identities=15% Similarity=0.146 Sum_probs=70.9
Q ss_pred eEEEEEeeCCeEEEEEEEEEe-CCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhh---hHHHHHh
Q 002381 797 MYCAILTVNSSVVSAGILRVF-GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE---AESIWTD 872 (929)
Q Consensus 797 fY~~VL~~~~~vVsaA~lri~-g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~---a~~~w~~ 872 (929)
.+.++++.+|++||.+.+.+. +...+||--++|+|+|||||+|+.||..+++.++..|++++++.+... +..+|.+
T Consensus 158 ~~~~v~~~~g~iVG~~~~~~~~~~~~~eI~~i~V~P~yRG~GiG~~Ll~~l~~~a~~~g~~~l~~~~~~~n~~a~~ly~k 237 (266)
T TIGR03827 158 VVYFGVEDGGKIIALASAEMDPENGNAEMTDFATLPEYRGKGLAKILLAAMEKEMKEKGIRTAYTIARASSYGMNITFAR 237 (266)
T ss_pred cEEEEEEECCEEEEEEEEecCCCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEeehhhcchhHHHHHHH
Confidence 444566789999999998553 346799999999999999999999999999999999999999987665 3568877
Q ss_pred ccCcEEcCH
Q 002381 873 KFGFKKIDP 881 (929)
Q Consensus 873 kfGF~~i~~ 881 (929)
+||+..+.
T Consensus 238 -~GF~~~G~ 245 (266)
T TIGR03827 238 -LGYAYGGT 245 (266)
T ss_pred -cCCccccE
Confidence 99997765
No 35
>KOG4299 consensus PHD Zn-finger protein [General function prediction only]
Probab=98.38 E-value=1.9e-07 Score=109.14 Aligned_cols=51 Identities=37% Similarity=0.931 Sum_probs=42.3
Q ss_pred ccccccCCCCCCCCCCCCceeecCCCCCccCCCCCCcCcCCcccCCCCCcceEcCCCcch
Q 002381 640 GCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRI 699 (929)
Q Consensus 640 ~C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p~~~~~L~elP~g~WfCc~~C~~i 699 (929)
+|..|++.+ .| ..+|.||.|++.||.+||.|+- ..+.+|.|.||| +.|..+
T Consensus 255 fCsaCn~~~----~F--~~~i~CD~Cp~sFH~~CLePPl--~~eniP~g~W~C-~ec~~k 305 (613)
T KOG4299|consen 255 FCSACNGSG----LF--NDIICCDGCPRSFHQTCLEPPL--EPENIPPGSWFC-PECKIK 305 (613)
T ss_pred HHHHhCCcc----cc--ccceeecCCchHHHHhhcCCCC--CcccCCCCcccc-CCCeee
Confidence 799999764 33 6789999999999999999841 367899999999 889753
No 36
>KOG0383 consensus Predicted helicase [General function prediction only]
Probab=98.37 E-value=1.5e-07 Score=112.86 Aligned_cols=156 Identities=26% Similarity=0.484 Sum_probs=100.8
Q ss_pred CCCcccccccCC--CCCCCCCCccccccccccccccccccccccccccccccccchhcccchhhhccccccccCCccccc
Q 002381 567 GCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLC 644 (929)
Q Consensus 567 ~Cp~aFH~~CL~--L~~vP~g~W~Cp~C~~~~~rek~v~~n~n~~a~gr~~Gvd~ieqi~krciR~~kd~e~e~~~C~iC 644 (929)
.|+++||..|++ +..-|+++|.||.|...... +...++ .-...+...|.+|
T Consensus 1 ~~~r~~~~~~~~p~~~~~~~~~~k~~~~e~~~~~------------------~~~~~~---------~~~~~~~e~c~ic 53 (696)
T KOG0383|consen 1 TCPRAYHRVCLDPKLKEEPEMDPKCPGCESSSAQ------------------VEAKDD---------DWDDAEQEACRIC 53 (696)
T ss_pred CCCcccCcCCCCcccccCCcCCccCcchhhcccc------------------cccccC---------Ccchhhhhhhhhh
Confidence 489999999997 56667899999999642100 000000 0012345679999
Q ss_pred cCCCCCCCCCCCCceeecCCCCCccCCCCCCcCcCCcccCCCCCcceEcCCCcc--hhHHHHHhhhhh--cccCc-hhhH
Q 002381 645 RGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSR--INSVLQNLLVQE--AEKLP-EFHL 719 (929)
Q Consensus 645 ~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p~~~~~L~elP~g~WfCc~~C~~--i~~~LqkLva~g--~e~lp-~sll 719 (929)
+. .+++|.||.|..+||..|+.+ ++...|.++|.| +.|.. ...+.++++.+. +.+.+ ...-
T Consensus 54 ~~---------~g~~l~c~tC~~s~h~~cl~~----pl~~~p~~~~~c-~Rc~~p~~~~k~~~il~~~~~~~~~~~~~~~ 119 (696)
T KOG0383|consen 54 AD---------GGELLWCDTCPASFHASCLGP----PLTPQPNGEFIC-PRCFCPKNAGKIEKILGWRWKPTPKPREGNQ 119 (696)
T ss_pred cC---------CCcEEEeccccHHHHHHccCC----CCCcCCccceee-eeeccCCCcccccccceeEecCCCCccccCc
Confidence 85 468899999999999999987 678888888999 48832 223455566543 22222 1111
Q ss_pred HHhhhhhcCccccccccCcceeEccCCCCChhhHHHHHHHHHhhh
Q 002381 720 NAIKKYAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFH 764 (929)
Q Consensus 720 ~~IkK~~e~gle~~~~~dikW~LLsgk~~s~e~~s~La~AL~If~ 764 (929)
+.+. +.....-..+++.++|+.+++.++.|.....+...+..+-
T Consensus 120 ~~~~-~~~~~~~~~re~~vk~qg~s~~~c~~~~e~~~q~~~~~~~ 163 (696)
T KOG0383|consen 120 GVIS-PRRSNGIVEREFFVKWQGLSYWHCSWKSELLLQNPLNTLP 163 (696)
T ss_pred CccC-CcccccchhhhcccccccCCccchhHHHHHHhhhhcccch
Confidence 1111 1111112356789999999999999887777766555553
No 37
>KOG4443 consensus Putative transcription factor HALR/MLL3, involved in embryonic development [General function prediction only]
Probab=98.35 E-value=1.4e-07 Score=110.55 Aligned_cols=92 Identities=30% Similarity=0.880 Sum_probs=71.1
Q ss_pred ccccccccccccCCcccccCCCCceEeccCCCcccccccCCC--CC-CCCCCcccccccccccccccccccccccccccc
Q 002381 538 GIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASL--SS-IPQGDWYCKYCQNMFERKRFLQHDANAVEAGRV 614 (929)
Q Consensus 538 ~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L--~~-vP~g~W~Cp~C~~~~~rek~v~~n~n~~a~gr~ 614 (929)
...|.+|...-. +-.|.|+.|..|...||.+|+.+ .. +-.+.|.||.|+.
T Consensus 18 ~~mc~l~~s~G~-------~~ag~m~ac~~c~~~yH~~cvt~~~~~~~l~~gWrC~~crv-------------------- 70 (694)
T KOG4443|consen 18 CLMCPLCGSSGK-------GRAGRLLACSDCGQKYHPYCVTSWAQHAVLSGGWRCPSCRV-------------------- 70 (694)
T ss_pred hhhhhhhccccc-------cccCcchhhhhhcccCCcchhhHHHhHHHhcCCcccCCcee--------------------
Confidence 445666764221 24567999999999999999962 11 1234599999973
Q ss_pred ccccchhcccchhhhccccccccCCccccccCCCCCCCCCCCCceeecCCCCCccCCCCCCcCcCCcccCCCCCcceE
Q 002381 615 SGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 692 (929)
Q Consensus 615 ~Gvd~ieqi~krciR~~kd~e~e~~~C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p~~~~~L~elP~g~WfC 692 (929)
|..|+..+ ++..+++|+.|+-.||.+|..| +++.+|.+.|+|
T Consensus 71 --------------------------Ce~c~~~g------D~~kf~~Ck~cDvsyh~yc~~P----~~~~v~sg~~~c 112 (694)
T KOG4443|consen 71 --------------------------CEACGTTG------DPKKFLLCKRCDVSYHCYCQKP----PNDKVPSGPWLC 112 (694)
T ss_pred --------------------------eeeccccC------CcccccccccccccccccccCC----ccccccCccccc
Confidence 77787432 6788999999999999999988 788999999999
No 38
>PRK13688 hypothetical protein; Provisional
Probab=98.35 E-value=1.5e-06 Score=87.64 Aligned_cols=76 Identities=18% Similarity=0.260 Sum_probs=60.0
Q ss_pred EEeeCCeEEEEEEEEEe----------CCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHH
Q 002381 801 ILTVNSSVVSAGILRVF----------GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIW 870 (929)
Q Consensus 801 VL~~~~~vVsaA~lri~----------g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w 870 (929)
+++.++++||++.+... ..+.++|-.++|+++|||||+|++||+.+++. ++. +.+.+...|..||
T Consensus 49 ~~~~~~~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~l~V~p~~rgkGiG~~Ll~~a~~~----~~~-~~~~~~~~a~~FY 123 (156)
T PRK13688 49 GIYYGDSLVARMSLYKKGGVEEPYFEDTQDYLELWKLEVLPKYQNRGYGEMLVDFAKSF----QLP-IKTIARNKSKDFW 123 (156)
T ss_pred EEEECCEEEEEEEEEecCCcccccccCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHh----CCe-EEEEeccchHHHH
Confidence 34678999998887542 24678999999999999999999999876543 443 4455667789999
Q ss_pred HhccCcEEcCHH
Q 002381 871 TDKFGFKKIDPE 882 (929)
Q Consensus 871 ~~kfGF~~i~~~ 882 (929)
.+ +||..++..
T Consensus 124 ~k-~GF~~~~~~ 134 (156)
T PRK13688 124 LK-LGFTPVEYK 134 (156)
T ss_pred Hh-CCCEEeEEe
Confidence 99 999988765
No 39
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=98.35 E-value=2.5e-06 Score=82.95 Aligned_cols=85 Identities=18% Similarity=0.234 Sum_probs=68.7
Q ss_pred eEEEEEeeCCeEEEEEEEEEeC----CeeEEEeeeEeecCccCCChhHHHHHHHHHHhhh-cCccEEEecCh---hhhHH
Q 002381 797 MYCAILTVNSSVVSAGILRVFG----QEVAELPLVATSKINHGKGYFQLLFACIEKLLSF-LRVKSIVLPAA---EEAES 868 (929)
Q Consensus 797 fY~~VL~~~~~vVsaA~lri~g----~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~-lgV~~LvLpA~---~~a~~ 868 (929)
.+.++...++++||.+.+.... ...+++. +++.++|||||+|+.|+..+++.+.. +|..++++... ..|..
T Consensus 51 ~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~~-~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~ 129 (162)
T PRK10140 51 IKQLVACIDGDVVGHLTIDVQQRPRRSHVADFG-ICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIK 129 (162)
T ss_pred cEEEEEEECCEEEEEEEEecccccccceEEEEE-EEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHH
Confidence 4556667889999999987542 2456664 89999999999999999999999988 79888776653 56788
Q ss_pred HHHhccCcEEcCHHH
Q 002381 869 IWTDKFGFKKIDPEL 883 (929)
Q Consensus 869 ~w~~kfGF~~i~~~~ 883 (929)
+|++ +||...+...
T Consensus 130 ~y~k-~GF~~~g~~~ 143 (162)
T PRK10140 130 VYKK-YGFEIEGTGK 143 (162)
T ss_pred HHHH-CCCEEEeecc
Confidence 9998 9999887643
No 40
>PRK09831 putative acyltransferase; Provisional
Probab=98.32 E-value=1.7e-06 Score=84.53 Aligned_cols=73 Identities=14% Similarity=0.156 Sum_probs=61.7
Q ss_pred EEEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCcEEc
Q 002381 800 AILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKI 879 (929)
Q Consensus 800 ~VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~~i 879 (929)
+|...+|++||.+.+.. +.+..++|+++|||||+|++||..+++.+.. +.+.+...|..||.+ +||..+
T Consensus 56 ~v~~~~~~iiG~~~~~~-----~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~-----l~v~~~~~a~~~Y~k-~Gf~~~ 124 (147)
T PRK09831 56 RVAVINAQPVGFITCIE-----HYIDMLFVDPEYTRRGVASALLKPLIKSESE-----LTVDASITAKPFFER-YGFQTV 124 (147)
T ss_pred EEEEECCEEEEEEEehh-----ceeeeEEECHHHcCCCHHHHHHHHHHHHhhh-----eEeecchhhHHHHHH-CCCEEe
Confidence 34578899999988742 4677899999999999999999999998876 555666789999999 999999
Q ss_pred CHHH
Q 002381 880 DPEL 883 (929)
Q Consensus 880 ~~~~ 883 (929)
+...
T Consensus 125 g~~~ 128 (147)
T PRK09831 125 KQQR 128 (147)
T ss_pred eccc
Confidence 8865
No 41
>PHA00673 acetyltransferase domain containing protein
Probab=98.32 E-value=3.5e-06 Score=84.98 Aligned_cols=84 Identities=13% Similarity=0.085 Sum_probs=73.3
Q ss_pred eEEEEEeeCCeEEEEEEEEEeC------CeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhh--hHH
Q 002381 797 MYCAILTVNSSVVSAGILRVFG------QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE--AES 868 (929)
Q Consensus 797 fY~~VL~~~~~vVsaA~lri~g------~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~--a~~ 868 (929)
-..+|.+.+|++||++.+.+.. ...+.|-.|-|++++||||+|++||..+++.++..|...|.+.|.++ .+.
T Consensus 55 ~~llVa~~~g~vVG~~~l~~~p~l~~~~~~~~~Ie~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~lyis~~p~~~tv~ 134 (154)
T PHA00673 55 AHFLGVFRGEELVGFACLLVTPVPHFKGQLIGTTESIFVAAAHRPGGAGMALLRATEALARDLGATGLYVSGPTEGRLVQ 134 (154)
T ss_pred cEEEEEEECCEEEEEEEEEEecCCccCCccEEEEEEEEEChhccCCCHHHHHHHHHHHHHHHCCCCEEEEecCCCccchH
Confidence 4445667799999999987754 35778999999999999999999999999999999999999999886 699
Q ss_pred HHHhccCcEEcCH
Q 002381 869 IWTDKFGFKKIDP 881 (929)
Q Consensus 869 ~w~~kfGF~~i~~ 881 (929)
||.+ .|++....
T Consensus 135 fy~~-~g~~~~~~ 146 (154)
T PHA00673 135 LLPA-AGYRETNR 146 (154)
T ss_pred HHHh-CCchhhch
Confidence 9999 99986543
No 42
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=98.20 E-value=8.5e-06 Score=87.94 Aligned_cols=81 Identities=7% Similarity=0.000 Sum_probs=64.7
Q ss_pred EEEEEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecCh-hhhHHHHHhccCc
Q 002381 798 YCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAA-EEAESIWTDKFGF 876 (929)
Q Consensus 798 Y~~VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~-~~a~~~w~~kfGF 876 (929)
+.+|...++++||.+.+.......+++-.++|+|+|||||+|++||..+++.+. +--.|++... ..|+.||.+ +||
T Consensus 47 ~~~~~~~~~~~vG~~~~~~~~~~~~~~~~l~V~p~~rg~GiG~~Ll~~~~~~~~--~~~~~~~~~~n~~a~~fy~~-~Gf 123 (292)
T TIGR03448 47 RHLVAVDSDPIVGYANLVPARGTDPAMAELVVHPAHRRRGIGRALIRALLAKGG--GRLRVWAHGDLPAARALASR-LGL 123 (292)
T ss_pred eEEEEEECCEEEEEEEEEcCCCCcceEEEEEECHhhcCCCHHHHHHHHHHHhcc--CceEEEEcCCCHHHHHHHHH-CCC
Confidence 345567889999999988875555788899999999999999999999999865 2234455543 568999999 999
Q ss_pred EEcCH
Q 002381 877 KKIDP 881 (929)
Q Consensus 877 ~~i~~ 881 (929)
+.+..
T Consensus 124 ~~~~~ 128 (292)
T TIGR03448 124 VPTRE 128 (292)
T ss_pred EEccE
Confidence 87765
No 43
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=98.17 E-value=6.8e-06 Score=88.71 Aligned_cols=86 Identities=16% Similarity=0.220 Sum_probs=68.2
Q ss_pred cceEEEEEeeCCeEEEEEEEEEeCC--eeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecCh---hhhHHH
Q 002381 795 GGMYCAILTVNSSVVSAGILRVFGQ--EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAA---EEAESI 869 (929)
Q Consensus 795 ~GfY~~VL~~~~~vVsaA~lri~g~--~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~---~~a~~~ 869 (929)
.++|.++-..+|++||.+.+.+... +.+++-.++|+++|||||+|+.||..+++.++..|+..+.+... ..|..|
T Consensus 198 ~~~~~a~~~~~~~~vG~~~~~~~~~~~~~~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g~~~v~l~v~~~N~~a~~~ 277 (292)
T TIGR03448 198 AGLFLAFDDAPGELLGFHWTKVHPDEPALGEVYVVGVDPAAQGRGLGDALTLIGLHHLAARGLPAVMLYVEADNEAAVRT 277 (292)
T ss_pred CceEEEEECCCCcEEEEEEEEecCCCCceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeCCCHHHHHH
Confidence 3455443212689999876666542 46888889999999999999999999999999999998887654 368999
Q ss_pred HHhccCcEEcCH
Q 002381 870 WTDKFGFKKIDP 881 (929)
Q Consensus 870 w~~kfGF~~i~~ 881 (929)
|++ +||+..+.
T Consensus 278 y~k-~GF~~~~~ 288 (292)
T TIGR03448 278 YEK-LGFTVAEV 288 (292)
T ss_pred HHH-cCCEEccc
Confidence 999 99997654
No 44
>KOG3139 consensus N-acetyltransferase [General function prediction only]
Probab=98.16 E-value=1.1e-05 Score=81.37 Aligned_cols=73 Identities=16% Similarity=0.170 Sum_probs=62.6
Q ss_pred EEEEEEEEEeC---CeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChh---hhHHHHHhccCcEEcCH
Q 002381 808 VVSAGILRVFG---QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAE---EAESIWTDKFGFKKIDP 881 (929)
Q Consensus 808 vVsaA~lri~g---~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~---~a~~~w~~kfGF~~i~~ 881 (929)
.|||+...... ..-++|-.+||+++|||||+|++|+..+.+.+++.|...++|.+.. .|..+|++ |||.....
T Consensus 68 ~VGai~ck~~~~r~~~rgyi~mLaV~~e~Rg~GIg~aLvr~aId~m~~~g~~eVvLeTe~~n~~A~~LY~s-LGF~r~~r 146 (165)
T KOG3139|consen 68 TVGAIVCKLDTHRNTLRGYIAMLAVDSEYRGQGIGKALVRKAIDAMRSRGYSEVVLETEVTNLSALRLYES-LGFKRDKR 146 (165)
T ss_pred eEEEEEEeccccCCcceEEEEEEEechhhccccHHHHHHHHHHHHHHHCCCcEEEEeccccchHHHHHHHh-cCceEecc
Confidence 57776655433 2459999999999999999999999999999999999999998754 68999999 99998665
No 45
>KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=98.11 E-value=9.8e-06 Score=79.71 Aligned_cols=83 Identities=17% Similarity=0.248 Sum_probs=74.2
Q ss_pred eEEEEEee--CCeEEEEEEEEEe-----CC-eeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHH
Q 002381 797 MYCAILTV--NSSVVSAGILRVF-----GQ-EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAES 868 (929)
Q Consensus 797 fY~~VL~~--~~~vVsaA~lri~-----g~-~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~ 868 (929)
+|.+|++. .++||++|+|.|. |- .-.+|-=|+|+++||||++|+.|+..+-.++.++|+=.+.|.-.++..+
T Consensus 53 Y~i~Vied~~s~~vigtatL~IE~KfIh~~g~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~LdC~~~nv~ 132 (150)
T KOG3396|consen 53 YYIVVIEDKESEKVIGTATLFIERKFIHGCGSRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILDCDPKNVK 132 (150)
T ss_pred EEEEEEEeCCcCeEEEEEEEEEehhhhhcccccCceeEEEeChhhhhhHHhHHHHHHHHHHHHhcCcEEEEEecchhhhh
Confidence 77777775 4899999999873 32 3568888999999999999999999999999999999999999999999
Q ss_pred HHHhccCcEEcC
Q 002381 869 IWTDKFGFKKID 880 (929)
Q Consensus 869 ~w~~kfGF~~i~ 880 (929)
||.+ |||+..+
T Consensus 133 FYeK-cG~s~~~ 143 (150)
T KOG3396|consen 133 FYEK-CGYSNAG 143 (150)
T ss_pred HHHH-cCccccc
Confidence 9999 9999766
No 46
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=98.10 E-value=1.3e-05 Score=79.97 Aligned_cols=83 Identities=12% Similarity=0.089 Sum_probs=66.1
Q ss_pred EEEEEe-eCCeEEEEEEEEE--eCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecC---hhhhHHHHH
Q 002381 798 YCAILT-VNSSVVSAGILRV--FGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPA---AEEAESIWT 871 (929)
Q Consensus 798 Y~~VL~-~~~~vVsaA~lri--~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA---~~~a~~~w~ 871 (929)
+++|.+ .+|++||.+.+.. ...+.+.+-.+||+++|||||+|+.|+..+++.+...++.+|.+.. -..|..+|+
T Consensus 40 ~~~v~~~~~~~ivG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~L~~~l~~~a~~~~~~~i~~~v~~~N~~a~~ly~ 119 (157)
T TIGR02406 40 TSIVAESEGGEIVGFVSGYLRPDRPDVLFVWQVAVDPRARGKGLARRLLEALLERVACERVRHLETTITPDNQASRALFK 119 (157)
T ss_pred cEEEEEcCCCeEEEEEEEEecCCCCCeEEEEEEEEChHhccCcHHHHHHHHHHHHHHhCCCCEEEEEEcCCCHHHHHHHH
Confidence 344556 4679999876543 3345788999999999999999999999999999999988887654 446788998
Q ss_pred hccCcEEcCH
Q 002381 872 DKFGFKKIDP 881 (929)
Q Consensus 872 ~kfGF~~i~~ 881 (929)
+ +||+....
T Consensus 120 k-~G~~~~~~ 128 (157)
T TIGR02406 120 A-LARRRGVH 128 (157)
T ss_pred H-hCcccCCC
Confidence 8 99987444
No 47
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=98.07 E-value=1e-05 Score=80.05 Aligned_cols=76 Identities=22% Similarity=0.251 Sum_probs=63.1
Q ss_pred eEEEEEEEE-EeCC----eeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCc-cEEEecChh---hhHHHHHhccCcE
Q 002381 807 SVVSAGILR-VFGQ----EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRV-KSIVLPAAE---EAESIWTDKFGFK 877 (929)
Q Consensus 807 ~vVsaA~lr-i~g~----~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV-~~LvLpA~~---~a~~~w~~kfGF~ 877 (929)
+++|....+ +.+. ..++|-.+||+|+|||+|+|++|+..+++.+...+. +.++|-... .|+.+|.+ +||.
T Consensus 72 ~~~G~~~~~~~~~~~~~~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~N~~Ai~lY~~-~GF~ 150 (177)
T COG0456 72 KVVGFLLVRVVDGRPSADHEGHIYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGLYRK-LGFE 150 (177)
T ss_pred ceeEEEEEEEecCCccccCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhcCCCceEEEEEecCChHHHHHHHH-cCCE
Confidence 477877775 3332 279999999999999999999999999999999986 777777654 48999999 9999
Q ss_pred EcCHHH
Q 002381 878 KIDPEL 883 (929)
Q Consensus 878 ~i~~~~ 883 (929)
.+....
T Consensus 151 ~~~~~~ 156 (177)
T COG0456 151 VVKIRK 156 (177)
T ss_pred EEeeeh
Confidence 987644
No 48
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=98.05 E-value=1.6e-05 Score=94.64 Aligned_cols=85 Identities=12% Similarity=0.133 Sum_probs=67.6
Q ss_pred ceEEEEEee--CCeEEEEEEEEEe------CCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecC---hh
Q 002381 796 GMYCAILTV--NSSVVSAGILRVF------GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPA---AE 864 (929)
Q Consensus 796 GfY~~VL~~--~~~vVsaA~lri~------g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA---~~ 864 (929)
+.+.+|.+. +|++||.+....+ +...++|-.|+|+++|||||+|++||..+++.++..|+.+++|.. -.
T Consensus 122 ~~~~~vA~~~~~g~IVG~~~~~~~~~~~~d~~~~~~i~~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G~~~i~L~V~~~N~ 201 (547)
T TIGR03103 122 AITYLVAEDEASGAIIGTVMGVDHRKAFNDPEHGSSLWCLAVDPQAAHPGVGEALVRALAEHFQSRGCAYMDLSVMHDNE 201 (547)
T ss_pred CceEEEEEECCCCeEEEEEEEEeccccccCCCCCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCH
Confidence 344455553 6999999875322 123478889999999999999999999999999999999987653 46
Q ss_pred hhHHHHHhccCcEEcCH
Q 002381 865 EAESIWTDKFGFKKIDP 881 (929)
Q Consensus 865 ~a~~~w~~kfGF~~i~~ 881 (929)
.|..||.+ +||+.++.
T Consensus 202 ~Ai~fY~k-lGf~~~~~ 217 (547)
T TIGR03103 202 QAIALYEK-LGFRRIPV 217 (547)
T ss_pred HHHHHHHH-CCCEEeeE
Confidence 78999998 99987643
No 49
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=98.04 E-value=3.1e-05 Score=75.20 Aligned_cols=81 Identities=21% Similarity=0.268 Sum_probs=64.9
Q ss_pred EEEEe-eCCeEEEEEEEEEeCC--eeEEEeeeEeecCccCCChhHHHHHHHHHHh-hhcCccEEEecC---hhhhHHHHH
Q 002381 799 CAILT-VNSSVVSAGILRVFGQ--EVAELPLVATSKINHGKGYFQLLFACIEKLL-SFLRVKSIVLPA---AEEAESIWT 871 (929)
Q Consensus 799 ~~VL~-~~~~vVsaA~lri~g~--~~AElplVAT~~~yRgqG~gr~L~~~IE~~l-~~lgV~~LvLpA---~~~a~~~w~ 871 (929)
.+++. .+|++||.+.++.... ..+++- +-+.++||++|+|+.|+..+++.+ ..+|+++|.+.. -..+..||+
T Consensus 52 ~~~v~~~~g~iiG~~~~~~~~~~~~~~~~~-~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~~~i~~~~ 130 (155)
T PF13420_consen 52 LFLVAEEDGKIIGYVSLRDIDPYNHTAELS-IYVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNEKAINFYK 130 (155)
T ss_dssp EEEEEECTTEEEEEEEEEESSSGTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-HHHHHHHH
T ss_pred EEEEEEcCCcEEEEEEEEeeeccCCEEEEe-eEEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCHHHHHHHH
Confidence 33334 5999999999986553 578887 455599999999999999999999 999999987543 445899999
Q ss_pred hccCcEEcCH
Q 002381 872 DKFGFKKIDP 881 (929)
Q Consensus 872 ~kfGF~~i~~ 881 (929)
+ +||+..+.
T Consensus 131 ~-~GF~~~g~ 139 (155)
T PF13420_consen 131 K-LGFEEEGE 139 (155)
T ss_dssp H-TTEEEEEE
T ss_pred h-CCCEEEEE
Confidence 9 99998764
No 50
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=98.02 E-value=2.4e-05 Score=62.10 Aligned_cols=61 Identities=20% Similarity=0.117 Sum_probs=54.9
Q ss_pred EEEeeCCeEEEEEEEEEeC--CeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEe
Q 002381 800 AILTVNSSVVSAGILRVFG--QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVL 860 (929)
Q Consensus 800 ~VL~~~~~vVsaA~lri~g--~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvL 860 (929)
+++..++++||.+.+.... ...+++-.++|+++|||+|+|+.||..+.+.+...|.+++++
T Consensus 2 ~~~~~~~~~ig~~~~~~~~~~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 64 (65)
T cd04301 2 LVAEDDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRL 64 (65)
T ss_pred EEEecCCEEEEEEEEEecCCCCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcCCcEEEe
Confidence 3456789999999988866 478999999999999999999999999999999999999886
No 51
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=98.01 E-value=2.6e-05 Score=71.03 Aligned_cols=75 Identities=16% Similarity=0.220 Sum_probs=56.2
Q ss_pred CCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEE-ec-ChhhhHHHHHhccCcEEcCH
Q 002381 805 NSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIV-LP-AAEEAESIWTDKFGFKKIDP 881 (929)
Q Consensus 805 ~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~Lv-Lp-A~~~a~~~w~~kfGF~~i~~ 881 (929)
+++.+..+.-.+..+. ++|-.|.|.|+|||+|+|+.|+.++.+.+..-|..-+. +. .-..+..+|++ +||+.+.+
T Consensus 6 ~~~~~~l~~~~~~~~~-g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~~~~l~v~~~N~~s~~ly~k-lGf~~~~~ 82 (86)
T PF08445_consen 6 DGELVALVAWIIRSDD-GEIGGVYTLPEHRRRGLGSALVAALARELLERGKTPFLYVDADNEASIRLYEK-LGFREIEE 82 (86)
T ss_dssp CTCCEEEEEEEEESCT-CCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTSEEEEEEETT-HHHHHHHHH-CT-EEEEE
T ss_pred ECCccceeeEeeeCCC-cEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHH-cCCEEEEE
Confidence 4455566665555555 99999999999999999999999999998888877533 32 33457899999 99998754
No 52
>PRK01346 hypothetical protein; Provisional
Probab=98.00 E-value=2.2e-05 Score=89.53 Aligned_cols=80 Identities=16% Similarity=0.127 Sum_probs=67.8
Q ss_pred EEEEeeCCeEEEEEEEEEe------CC--eeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHH
Q 002381 799 CAILTVNSSVVSAGILRVF------GQ--EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIW 870 (929)
Q Consensus 799 ~~VL~~~~~vVsaA~lri~------g~--~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w 870 (929)
+++.+.+|++||.+.+..+ |. ..+.|-.|||+|+|||||+|++||..+++.++..|+..++|.+.. ..||
T Consensus 49 ~~va~~~~~lvg~~~~~~~~~~~~~~~~~~~~~i~~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~~~~~L~~~~--~~~Y 126 (411)
T PRK01346 49 TLGAFDGDEVVGTAGAFDLRLTVPGGAVLPAAGVTAVTVAPTHRRRGLLTALMREQLRRIRERGEPVAALTASE--GGIY 126 (411)
T ss_pred eEEEEECCEEEEEEEEeccccccCCCCccceeEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCcEEEEECCc--hhhH
Confidence 3556789999999887543 32 478999999999999999999999999999999999988887664 4789
Q ss_pred HhccCcEEcCH
Q 002381 871 TDKFGFKKIDP 881 (929)
Q Consensus 871 ~~kfGF~~i~~ 881 (929)
.+ |||.....
T Consensus 127 ~r-~Gf~~~~~ 136 (411)
T PRK01346 127 GR-FGYGPATY 136 (411)
T ss_pred hh-CCCeeccc
Confidence 98 99987765
No 53
>PHA01807 hypothetical protein
Probab=98.00 E-value=1.7e-05 Score=79.94 Aligned_cols=81 Identities=7% Similarity=-0.008 Sum_probs=63.2
Q ss_pred EEEEEeeCCeEEEEEEEEEeCC----eeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChh---hhHHHH
Q 002381 798 YCAILTVNSSVVSAGILRVFGQ----EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAE---EAESIW 870 (929)
Q Consensus 798 Y~~VL~~~~~vVsaA~lri~g~----~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~---~a~~~w 870 (929)
+.++++.+|++||.+.+..... .+.+|..+.|+++|||+|+|+.||+.+++.++..|+..|++-... .|..+|
T Consensus 54 ~~lva~~dg~lvG~~~l~~~~~~~~~~i~~l~~lYV~pe~RG~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~~a~~~y 133 (153)
T PHA01807 54 TELLVFRDGKLAGIAVLVFEDDPHVGPCLGVQWQYVLPEYRNAGVAREFLRELIRLAGEGNLPLIAFSHREGEGRYTIHY 133 (153)
T ss_pred eEEEEEECCEEEEEEEEEcCCCcceeeeccceeEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCcHHHHHHH
Confidence 3356678999999999865432 234455579999999999999999999999999999999887655 467788
Q ss_pred HhccCcEEcCH
Q 002381 871 TDKFGFKKIDP 881 (929)
Q Consensus 871 ~~kfGF~~i~~ 881 (929)
.+ |++.+.
T Consensus 134 ~~---~~~~~~ 141 (153)
T PHA01807 134 RR---VKPYGQ 141 (153)
T ss_pred Hh---cCccCC
Confidence 88 444443
No 54
>PRK10562 putative acetyltransferase; Provisional
Probab=97.92 E-value=3.9e-05 Score=74.51 Aligned_cols=76 Identities=11% Similarity=0.103 Sum_probs=58.8
Q ss_pred EEEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCcEEc
Q 002381 800 AILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKI 879 (929)
Q Consensus 800 ~VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~~i 879 (929)
+++..+|++||.+.+... ..+-.++|+++|||+|+|+.||..+++.+..+.+ .+...-..+..||++ +||+.+
T Consensus 51 ~v~~~~~~~iG~~~~~~~----~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~~~~--~v~~~N~~s~~~y~k-~Gf~~~ 123 (145)
T PRK10562 51 WVWEEDGKLLGFVSVLEG----RFVGALFVAPKAVRRGIGKALMQHVQQRYPHLSL--EVYQKNQRAVNFYHA-QGFRIV 123 (145)
T ss_pred EEEEECCEEEEEEEEeec----cEEEEEEECHHHcCCCHHHHHHHHHHhhCCeEEE--EEEcCChHHHHHHHH-CCCEEc
Confidence 345678899999887432 3577899999999999999999999997654432 233445578999999 999998
Q ss_pred CHH
Q 002381 880 DPE 882 (929)
Q Consensus 880 ~~~ 882 (929)
+..
T Consensus 124 ~~~ 126 (145)
T PRK10562 124 DSA 126 (145)
T ss_pred ccc
Confidence 863
No 55
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=97.91 E-value=6e-05 Score=76.11 Aligned_cols=82 Identities=17% Similarity=0.128 Sum_probs=66.9
Q ss_pred EEEEEeeCCeEEEEEEEEEeC--CeeEEEeeeEeecCccCCChhHHHHHHHHHHhh-hcCccEEEecCh---hhhHHHHH
Q 002381 798 YCAILTVNSSVVSAGILRVFG--QEVAELPLVATSKINHGKGYFQLLFACIEKLLS-FLRVKSIVLPAA---EEAESIWT 871 (929)
Q Consensus 798 Y~~VL~~~~~vVsaA~lri~g--~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~-~lgV~~LvLpA~---~~a~~~w~ 871 (929)
+.++++.+|++||.+.+.... ...+++- +++.++|||+|+|+.++..+.+.+. .+|+++|++... ..+..+|.
T Consensus 58 ~~~~i~~~g~~iG~~~~~~~~~~~~~~~~~-~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~ye 136 (186)
T PRK15130 58 RRFVVECDGEKAGLVELVEINHVHRRAEFQ-IIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYR 136 (186)
T ss_pred cEEEEEECCEEEEEEEEEeecCCCCeEEEE-EEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHHHH
Confidence 344557899999999886543 3467774 8999999999999999999999875 689999988643 46889999
Q ss_pred hccCcEEcCH
Q 002381 872 DKFGFKKIDP 881 (929)
Q Consensus 872 ~kfGF~~i~~ 881 (929)
+ +||+..+.
T Consensus 137 k-~GF~~~~~ 145 (186)
T PRK15130 137 K-LGFEVEGE 145 (186)
T ss_pred H-CCCEEEEE
Confidence 9 99998765
No 56
>PRK10514 putative acetyltransferase; Provisional
Probab=97.91 E-value=4.7e-05 Score=73.27 Aligned_cols=73 Identities=16% Similarity=0.114 Sum_probs=57.6
Q ss_pred eeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCcEEcCHH
Q 002381 803 TVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPE 882 (929)
Q Consensus 803 ~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~~i~~~ 882 (929)
..++++||.+.+.- .++..++|+++|||||+|++||+.+++.+.. +...+...-..+..||++ +||+..+..
T Consensus 56 ~~~~~~iG~~~~~~-----~~~~~~~v~p~~rgkGig~~Ll~~~~~~~~~--i~~~v~~~N~~a~~~yek-~Gf~~~~~~ 127 (145)
T PRK10514 56 DERDQPVGFMLLSG-----GHMEALFVDPDVRGCGVGRMLVEHALSLHPE--LTTDVNEQNEQAVGFYKK-MGFKVTGRS 127 (145)
T ss_pred ecCCcEEEEEEEec-----CcEeEEEECHHhccCCHHHHHHHHHHHhccc--cEEEeecCCHHHHHHHHH-CCCEEeccc
Confidence 46789999887642 3455799999999999999999999997643 344444555678999998 999998775
Q ss_pred H
Q 002381 883 L 883 (929)
Q Consensus 883 ~ 883 (929)
.
T Consensus 128 ~ 128 (145)
T PRK10514 128 E 128 (145)
T ss_pred c
Confidence 4
No 57
>PF00628 PHD: PHD-finger; InterPro: IPR019787 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the PHD (homeodomain) zinc finger domain [,], which is a C4HC3 zinc-finger-like motif found in nuclear proteins thought to be involved in chromatin-mediated transcriptional regulation. The PHD finger motif is reminiscent of, but distinct from the C3HC4 type RING finger. The function of this domain is not yet known but in analogy with the LIM domain it could be involved in protein-protein interaction and be important for the assembly or activity of multicomponent complexes involved in transcriptional activation or repression. Alternatively, the interactions could be intra-molecular and be important in maintaining the structural integrity of the protein. In similarity to the RING finger and the LIM domain, the PHD finger is thought to bind two zinc ions. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0005515 protein binding; PDB: 3ZVY_A 2LGG_A 3SOW_A 3SOU_B 3ASL_A 3ASK_A 3ZVZ_B 3T6R_A 2LGK_A 3SOX_B ....
Probab=97.90 E-value=2.2e-06 Score=70.17 Aligned_cols=48 Identities=31% Similarity=0.958 Sum_probs=36.5
Q ss_pred cccccCCCCCCCCCCCCceeecCCCCCccCCCCCCcCcCCcccCCCCCcceEcCCCc
Q 002381 641 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS 697 (929)
Q Consensus 641 C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p~~~~~L~elP~g~WfCc~~C~ 697 (929)
|.+|+..+ ..+.||.||.|+++||..|+.+... ....+.+.|+| +.|.
T Consensus 2 C~vC~~~~------~~~~~i~C~~C~~~~H~~C~~~~~~--~~~~~~~~w~C-~~C~ 49 (51)
T PF00628_consen 2 CPVCGQSD------DDGDMIQCDSCNRWYHQECVGPPEK--AEEIPSGDWYC-PNCR 49 (51)
T ss_dssp BTTTTSSC------TTSSEEEBSTTSCEEETTTSTSSHS--HHSHHSSSBSS-HHHH
T ss_pred CcCCCCcC------CCCCeEEcCCCChhhCcccCCCChh--hccCCCCcEEC-cCCc
Confidence 88898743 5788999999999999999987431 12334569999 6674
No 58
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=97.90 E-value=4.8e-05 Score=84.55 Aligned_cols=82 Identities=11% Similarity=0.027 Sum_probs=68.8
Q ss_pred ceEEEEEee---CCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecC-----hhhhH
Q 002381 796 GMYCAILTV---NSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPA-----AEEAE 867 (929)
Q Consensus 796 GfY~~VL~~---~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA-----~~~a~ 867 (929)
..|++.+.. ++.+||.+.++..+ +.++|-.+++++.|||+|+|++||..+++.++..|+.+|+|.. -..|.
T Consensus 230 ~~~~~~~~d~~gd~givG~~~~~~~~-~~~~I~~l~vs~r~~grGig~~Ll~~l~~~a~~~G~~~i~l~v~~~~~N~~A~ 308 (320)
T TIGR01686 230 EIVTVSMSDRFGDSGIIGIFVFEKKE-GNLFIDDLCMSCRALGRGVETRMLRWLFEQALDLGNHNARLYYRRTERNMPFL 308 (320)
T ss_pred CEEEEEEEecCCCCceEEEEEEEecC-CcEEEEEEEEcHhHhcCcHHHHHHHHHHHHHHHcCCCeEEEEEeeCCCchHHH
Confidence 355555543 67899999987644 6789999999999999999999999999999999999988854 34689
Q ss_pred HHHHhccCcEEc
Q 002381 868 SIWTDKFGFKKI 879 (929)
Q Consensus 868 ~~w~~kfGF~~i 879 (929)
.||.+ +||...
T Consensus 309 ~fY~~-~GF~~~ 319 (320)
T TIGR01686 309 SFYEQ-IGFEDE 319 (320)
T ss_pred HHHHH-cCCccC
Confidence 99998 999854
No 59
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=97.88 E-value=8.4e-05 Score=72.50 Aligned_cols=86 Identities=15% Similarity=0.130 Sum_probs=68.4
Q ss_pred cceEEEEEeeCCeEEEEEEEEE------eCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhc-CccEEEecChh---
Q 002381 795 GGMYCAILTVNSSVVSAGILRV------FGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFL-RVKSIVLPAAE--- 864 (929)
Q Consensus 795 ~GfY~~VL~~~~~vVsaA~lri------~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~l-gV~~LvLpA~~--- 864 (929)
.+.+.+|++.||++||.+.+.- .....+.+-.+++.++|||||+|+.+|.++.+.+..- ++++|++....
T Consensus 46 ~~~~~~v~~~dg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~ 125 (152)
T PF13523_consen 46 PGHHPYVAEDDGEPIGYFEIYWPDEDYDADDGDRGIHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNT 125 (152)
T ss_dssp TTEEEEEEEETTEEEEEEEEEEGGGSS---TTEEEEEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-H
T ss_pred CCceEEEEEECCEEEEEEEEecccccccCCCCEEEEeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCH
Confidence 4677888899999999887642 1345677899999999999999999999999887765 89999998765
Q ss_pred hhHHHHHhccCcEEcCH
Q 002381 865 EAESIWTDKFGFKKIDP 881 (929)
Q Consensus 865 ~a~~~w~~kfGF~~i~~ 881 (929)
-++..|++ +||+.+++
T Consensus 126 ~~~~~~~k-~GF~~~g~ 141 (152)
T PF13523_consen 126 RAIRLYEK-AGFRKVGE 141 (152)
T ss_dssp HHHHHHHH-TT-EEEEE
T ss_pred HHHHHHHH-cCCEEeeE
Confidence 47888998 99998765
No 60
>smart00249 PHD PHD zinc finger. The plant homeodomain (PHD) finger is a C4HC3 zinc-finger-like motif found in nuclear proteins thought to be involved in epigenetics and chromatin-mediated transcriptional regulation. The PHD finger binds two zinc ions using the so-called 'cross-brace' motif and is thus structurally related to the KOG0383 consensus Predicted helicase [General function prediction only]
Probab=97.85 E-value=9.9e-06 Score=97.66 Aligned_cols=49 Identities=39% Similarity=0.887 Sum_probs=42.8
Q ss_pred CCccccccccccccCCcccccCCCCceEeccCCCcccccccCC--CCCCCCCCcccccccccc
Q 002381 536 GLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMF 596 (929)
Q Consensus 536 ~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~--L~~vP~g~W~Cp~C~~~~ 596 (929)
.+...|.+|. ++|++++||.|+.+||..|++ +...|.++|.|++|....
T Consensus 45 ~~~e~c~ic~------------~~g~~l~c~tC~~s~h~~cl~~pl~~~p~~~~~c~Rc~~p~ 95 (696)
T KOG0383|consen 45 AEQEACRICA------------DGGELLWCDTCPASFHASCLGPPLTPQPNGEFICPRCFCPK 95 (696)
T ss_pred hhhhhhhhhc------------CCCcEEEeccccHHHHHHccCCCCCcCCccceeeeeeccCC
Confidence 4677899999 699999999999999999996 678888889999995543
No 62
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=97.83 E-value=5.5e-05 Score=89.61 Aligned_cols=77 Identities=16% Similarity=0.200 Sum_probs=65.1
Q ss_pred eCCeEEEEEEEEEeCCeeE-----------EEeeeEe--------ecCccCCChhHHHHHHHHHHhhhcCccEEEecChh
Q 002381 804 VNSSVVSAGILRVFGQEVA-----------ELPLVAT--------SKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAE 864 (929)
Q Consensus 804 ~~~~vVsaA~lri~g~~~A-----------ElplVAT--------~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~ 864 (929)
.++.+||-.+||....+.. ||-..++ .++|||+|+|+.||+++|+.|++.|++.|+|.+..
T Consensus 421 ~~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~~G~~~i~v~s~~ 500 (522)
T TIGR01211 421 KNDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAEEGSEKILVISGI 500 (522)
T ss_pred CCCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHHCCCCEEEEeeCc
Confidence 4678999998887664322 5555544 58899999999999999999999999999999999
Q ss_pred hhHHHHHhccCcEEcCH
Q 002381 865 EAESIWTDKFGFKKIDP 881 (929)
Q Consensus 865 ~a~~~w~~kfGF~~i~~ 881 (929)
.|..||.+ +||...++
T Consensus 501 ~A~~FY~k-lGf~~~g~ 516 (522)
T TIGR01211 501 GVREYYRK-LGYELDGP 516 (522)
T ss_pred hHHHHHHH-CCCEEEcc
Confidence 99999998 99998764
No 63
>COG5034 TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
Probab=97.78 E-value=2.1e-05 Score=83.98 Aligned_cols=49 Identities=39% Similarity=1.032 Sum_probs=41.7
Q ss_pred cCCccccccccccccCCcccccCCCCceEeccC--CCc-ccccccCCCCCCCCCCcccccccc
Q 002381 535 NGLGIICHCCNSEVSPSQFEAHADGGNLLPCDG--CPR-AFHKECASLSSIPQGDWYCKYCQN 594 (929)
Q Consensus 535 ~~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~--Cp~-aFH~~CL~L~~vP~g~W~Cp~C~~ 594 (929)
.++.-+|.|=+- ..|+|+-||+ |.+ .||+.|++|...|.|.|||+.|+.
T Consensus 218 e~e~lYCfCqqv-----------SyGqMVaCDn~nCkrEWFH~~CVGLk~pPKG~WYC~eCk~ 269 (271)
T COG5034 218 EGEELYCFCQQV-----------SYGQMVACDNANCKREWFHLECVGLKEPPKGKWYCPECKK 269 (271)
T ss_pred cCceeEEEeccc-----------ccccceecCCCCCchhheeccccccCCCCCCcEeCHHhHh
Confidence 466778875442 4799999998 998 999999999999999999999974
No 64
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=97.78 E-value=0.00016 Score=70.15 Aligned_cols=81 Identities=14% Similarity=0.109 Sum_probs=66.1
Q ss_pred EEEeeCCeEEEEEEEEEeC--CeeEEEeeeEeecCccCCChhHHHHHHHHHHhh-hcCccEEEec---ChhhhHHHHHhc
Q 002381 800 AILTVNSSVVSAGILRVFG--QEVAELPLVATSKINHGKGYFQLLFACIEKLLS-FLRVKSIVLP---AAEEAESIWTDK 873 (929)
Q Consensus 800 ~VL~~~~~vVsaA~lri~g--~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~-~lgV~~LvLp---A~~~a~~~w~~k 873 (929)
+++..+|++||.+.+.... ...+++... +.+.+| +|||+.++.++++.+. .+|+.+|++. .-..+..+|.+
T Consensus 54 ~~~~~~g~~vG~~~~~~~~~~~~~~~~g~~-~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~~s~~~y~k- 130 (156)
T TIGR03585 54 WIVCQESRPIGVISFTDINLVHKSAFWGIY-ANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALKLYEK- 130 (156)
T ss_pred EEEEECCEEEEEEEEEecChhhCeEEEEEE-eChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCHHHHHHHHH-
Confidence 3446789999999987655 456788765 889999 9999999999999987 5899999875 45568899999
Q ss_pred cCcEEcCHHH
Q 002381 874 FGFKKIDPEL 883 (929)
Q Consensus 874 fGF~~i~~~~ 883 (929)
+||+.++...
T Consensus 131 ~Gf~~~g~~~ 140 (156)
T TIGR03585 131 FGFEREGVFR 140 (156)
T ss_pred cCCeEeeeeh
Confidence 9999887543
No 65
>PF00628 PHD: PHD-finger; InterPro: IPR019787 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the PHD (homeodomain) zinc finger domain [,], which is a C4HC3 zinc-finger-like motif found in nuclear proteins thought to be involved in chromatin-mediated transcriptional regulation. The PHD finger motif is reminiscent of, but distinct from the C3HC4 type RING finger. The function of this domain is not yet known but in analogy with the LIM domain it could be involved in protein-protein interaction and be important for the assembly or activity of multicomponent complexes involved in transcriptional activation or repression. Alternatively, the interactions could be intra-molecular and be important in maintaining the structural integrity of the protein. In similarity to the RING finger and the LIM domain, the PHD finger is thought to bind two zinc ions. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0005515 protein binding; PDB: 3ZVY_A 2LGG_A 3SOW_A 3SOU_B 3ASL_A 3ASK_A 3ZVZ_B 3T6R_A 2LGK_A 3SOX_B ....
Probab=97.77 E-value=1.2e-05 Score=65.81 Aligned_cols=46 Identities=41% Similarity=1.174 Sum_probs=37.1
Q ss_pred ccccccccccCCcccccCCCCceEeccCCCcccccccCCCC----CCCCCCcccccccc
Q 002381 540 ICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLS----SIPQGDWYCKYCQN 594 (929)
Q Consensus 540 ~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~----~vP~g~W~Cp~C~~ 594 (929)
+|.+|++. .+.+++|.||.|.+.||..|+++. ..+.+.|+|+.|..
T Consensus 1 ~C~vC~~~---------~~~~~~i~C~~C~~~~H~~C~~~~~~~~~~~~~~w~C~~C~~ 50 (51)
T PF00628_consen 1 YCPVCGQS---------DDDGDMIQCDSCNRWYHQECVGPPEKAEEIPSGDWYCPNCRP 50 (51)
T ss_dssp EBTTTTSS---------CTTSSEEEBSTTSCEEETTTSTSSHSHHSHHSSSBSSHHHHH
T ss_pred eCcCCCCc---------CCCCCeEEcCCCChhhCcccCCCChhhccCCCCcEECcCCcC
Confidence 48888861 268899999999999999999854 33455899999974
No 66
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=97.76 E-value=0.00018 Score=75.50 Aligned_cols=87 Identities=16% Similarity=0.124 Sum_probs=63.6
Q ss_pred ecceEEEEEeeCC--eEEEEEEEEEeC-------------------------------------CeeEEEeeeEeecCcc
Q 002381 794 FGGMYCAILTVNS--SVVSAGILRVFG-------------------------------------QEVAELPLVATSKINH 834 (929)
Q Consensus 794 f~GfY~~VL~~~~--~vVsaA~lri~g-------------------------------------~~~AElplVAT~~~yR 834 (929)
=-+...++|..++ +|++|+-+-..| -.-++|-+|||+|++|
T Consensus 24 aP~h~l~~l~~~~~p~il~~~~v~~EG~l~~~l~~~i~~g~rRp~G~LiP~~L~~~~~~~~f~~l~g~RIvRIAvhP~~q 103 (196)
T PF13718_consen 24 APNHRLFVLLQPGDPDILGVAQVALEGGLSKELIEAILSGGRRPKGHLIPQTLAQHFGDPEFAQLSGARIVRIAVHPDLQ 103 (196)
T ss_dssp -TTEEEEEEE-SS--SEEEEEEEEEEE---HHHHHHHHTTS---SS-HHHHHHHHHSS-TTGGGSEEEEEEEEEE-CCC-
T ss_pred CCcceeehhccCCCceEEEEEEEEecCCCCHHHHHHHHhCCCCCCCCCHHHHHHHHhCCHHHHhhcceeEEEEEEChhhh
Confidence 3456778888888 999999887666 2368899999999999
Q ss_pred CCChhHHHHHHHHHHh-------------------------hhcCccEEEec--ChhhhHHHHHhccCcEEcCH
Q 002381 835 GKGYFQLLFACIEKLL-------------------------SFLRVKSIVLP--AAEEAESIWTDKFGFKKIDP 881 (929)
Q Consensus 835 gqG~gr~L~~~IE~~l-------------------------~~lgV~~LvLp--A~~~a~~~w~~kfGF~~i~~ 881 (929)
++|||++|++.+++.+ +.-+|..|=.. +.++...||.+ .||.++--
T Consensus 104 ~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~vDylGtSFG~t~~Ll~FW~k-~gf~pv~l 176 (196)
T PF13718_consen 104 RMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPGVDYLGTSFGATPELLKFWQK-NGFVPVYL 176 (196)
T ss_dssp SSSHHHHHHHHHHHT-----------------------------S-SEEEEEEE--HHHHHHHHC-TT-EEEEE
T ss_pred cCCHHHHHHHHHHHHHhhhcccccccccccccccccccccccccCCCEEEeccCCCHHHHHHHHH-CCcEEEEE
Confidence 9999999999999999 47788876544 77889999999 99998743
No 67
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=97.74 E-value=9e-05 Score=80.18 Aligned_cols=84 Identities=20% Similarity=0.252 Sum_probs=68.1
Q ss_pred eEEEEEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHh-hhcCccEEEecChh-hhHHHHHhcc
Q 002381 797 MYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLL-SFLRVKSIVLPAAE-EAESIWTDKF 874 (929)
Q Consensus 797 fY~~VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l-~~lgV~~LvLpA~~-~a~~~w~~kf 874 (929)
+.++-+..+|+||+.|...-.+..+|+|-.|.|.|+|||+||+.+|+.++-..+ .+=...-|+..++. -|-.+|.+ +
T Consensus 177 ~~~~f~~~d~~iVa~A~t~a~~~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk~~~L~~~~~N~~A~~iY~r-i 255 (268)
T COG3393 177 SRTYFLEGDGKIVAKAETAAENPAYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGKIPCLFVNSDNPVARRIYQR-I 255 (268)
T ss_pred eeEEEEccCCcEEEeeeccccCCcceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCCCeeEEEEecCCHHHHHHHHH-h
Confidence 444445666799999999999999999999999999999999999999986654 44445566665443 46789999 9
Q ss_pred CcEEcCH
Q 002381 875 GFKKIDP 881 (929)
Q Consensus 875 GF~~i~~ 881 (929)
||+.+++
T Consensus 256 GF~~~g~ 262 (268)
T COG3393 256 GFREIGE 262 (268)
T ss_pred CCeecce
Confidence 9998874
No 68
>KOG1244 consensus Predicted transcription factor Requiem/NEURO-D4 [Transcription]
Probab=97.73 E-value=1.2e-05 Score=86.34 Aligned_cols=39 Identities=36% Similarity=0.940 Sum_probs=34.8
Q ss_pred CCCceEeccCCCcccccccCC--CCCCCCCCcccccccccc
Q 002381 558 DGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMF 596 (929)
Q Consensus 558 dgG~Ll~CD~Cp~aFH~~CL~--L~~vP~g~W~Cp~C~~~~ 596 (929)
+.++|++||.|+++||.+||. +...|+|.|.|..|...+
T Consensus 292 nddqllfcddcdrgyhmyclsppm~eppegswsc~KOG~~~ 332 (336)
T KOG1244|consen 292 NDDQLLFCDDCDRGYHMYCLSPPMVEPPEGSWSCHLCLEEL 332 (336)
T ss_pred CCceeEeecccCCceeeEecCCCcCCCCCCchhHHHHHHHH
Confidence 467899999999999999996 788899999999997654
No 69
>KOG1973 consensus Chromatin remodeling protein, contains PHD Zn-finger [Chromatin structure and dynamics]
Probab=97.69 E-value=1.7e-05 Score=86.91 Aligned_cols=49 Identities=35% Similarity=0.929 Sum_probs=42.0
Q ss_pred CCccccccccccccCCcccccCCCCceEeccC--CC-cccccccCCCCCCCCCCccccccccc
Q 002381 536 GLGIICHCCNSEVSPSQFEAHADGGNLLPCDG--CP-RAFHKECASLSSIPQGDWYCKYCQNM 595 (929)
Q Consensus 536 ~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~--Cp-~aFH~~CL~L~~vP~g~W~Cp~C~~~ 595 (929)
.+..+|.|... ..|+|+-||. |+ ..||+.|++|..-|.|.|||+.|...
T Consensus 217 ~e~~yC~Cnqv-----------syg~Mi~CDn~~C~~eWFH~~CVGL~~~PkgkWyC~~C~~~ 268 (274)
T KOG1973|consen 217 DEPTYCICNQV-----------SYGKMIGCDNPGCPIEWFHFTCVGLKTKPKGKWYCPRCKAE 268 (274)
T ss_pred CCCEEEEeccc-----------ccccccccCCCCCCcceEEEeccccccCCCCcccchhhhhh
Confidence 35567877742 4899999998 99 89999999999999999999999853
No 70
>KOG1512 consensus PHD Zn-finger protein [General function prediction only]
Probab=97.65 E-value=1.9e-05 Score=85.22 Aligned_cols=50 Identities=32% Similarity=0.787 Sum_probs=41.7
Q ss_pred CCccccccccccccCCcccccCCCCceEeccCCCcccccccCCCCCCCCCCcccc-cccc
Q 002381 536 GLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCK-YCQN 594 (929)
Q Consensus 536 ~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~~vP~g~W~Cp-~C~~ 594 (929)
-+...|.+|+++. -..++++||.|+++||..|++|..+|.|.|.|. .|..
T Consensus 312 ~~C~lC~IC~~P~---------~E~E~~FCD~CDRG~HT~CVGL~~lP~G~WICD~~C~~ 362 (381)
T KOG1512|consen 312 SSCELCRICLGPV---------IESEHLFCDVCDRGPHTLCVGLQDLPRGEWICDMRCRE 362 (381)
T ss_pred cccHhhhccCCcc---------cchheeccccccCCCCccccccccccCccchhhhHHHH
Confidence 3455688888754 357899999999999999999999999999998 5643
No 71
>KOG3397 consensus Acetyltransferases [General function prediction only]
Probab=97.64 E-value=7.6e-05 Score=76.12 Aligned_cols=77 Identities=19% Similarity=0.299 Sum_probs=63.4
Q ss_pred CCeEEEEEEEEEeC--CeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCcEEcCHH
Q 002381 805 NSSVVSAGILRVFG--QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPE 882 (929)
Q Consensus 805 ~~~vVsaA~lri~g--~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~~i~~~ 882 (929)
..+|||-++|--.- +..--+-.|.|...+||||+|+.||+..|..++..|++.+.|.+.++ ..||++ +||+.-+.-
T Consensus 65 ~~~VigH~rLS~i~n~~~al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R~~gf~~~yLsT~DQ-~~FYe~-lGYe~c~Pi 142 (225)
T KOG3397|consen 65 NDEVLGHSRLSHLPNRDHALWVESVVVKKDQRGLGFGKFLMKSTEKWMREKGFNEAYLSTDDQ-CRFYES-LGYEKCDPI 142 (225)
T ss_pred ccceeeeeccccCCCCCceeEEEEEEEehhhccccHHHHHHHHHHHHHHHhhhhheeeecccc-hhhhhh-hcccccCce
Confidence 35677766654322 35667889999999999999999999999999999999999988755 689999 999987764
Q ss_pred H
Q 002381 883 L 883 (929)
Q Consensus 883 ~ 883 (929)
+
T Consensus 143 ~ 143 (225)
T KOG3397|consen 143 V 143 (225)
T ss_pred e
Confidence 4
No 72
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=97.61 E-value=0.00027 Score=71.99 Aligned_cols=83 Identities=8% Similarity=0.125 Sum_probs=65.6
Q ss_pred eEEEEEeeCCeEEEEEEEEEeCC---eeEEEeeeEeecCccCCChhHHHHHHHHHHhhh-cCccEEEecChh---hhHHH
Q 002381 797 MYCAILTVNSSVVSAGILRVFGQ---EVAELPLVATSKINHGKGYFQLLFACIEKLLSF-LRVKSIVLPAAE---EAESI 869 (929)
Q Consensus 797 fY~~VL~~~~~vVsaA~lri~g~---~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~-lgV~~LvLpA~~---~a~~~ 869 (929)
.|.+++..++++||.+.++.... ..+||- +.+.++|||||||+.++.++.+.+.. +|+.+|++.... -+..+
T Consensus 77 ~~~i~~~~~~~~iG~i~l~~~~~~~~~~~eig-~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~S~~l 155 (194)
T PRK10809 77 YFALLDPDEKEIIGVANFSNVVRGSFHACYLG-YSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKRSGDL 155 (194)
T ss_pred EEEEEECCCCeEEEEEEEEeecCCCeeeEEEE-EEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHHHHHH
Confidence 34444445789999999876542 346655 46899999999999999999999876 899999988755 46789
Q ss_pred HHhccCcEEcCH
Q 002381 870 WTDKFGFKKIDP 881 (929)
Q Consensus 870 w~~kfGF~~i~~ 881 (929)
+++ +||+..+.
T Consensus 156 ~ek-~Gf~~~g~ 166 (194)
T PRK10809 156 LAR-LGFEKEGY 166 (194)
T ss_pred HHH-CCCcEEee
Confidence 999 99997665
No 73
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=97.60 E-value=0.00015 Score=74.49 Aligned_cols=140 Identities=15% Similarity=0.145 Sum_probs=95.0
Q ss_pred hHHHHHHHHHhhhhcCCCcccCCCCCCccccccccccCCCceecceEEEEEeeCCeEEEEEEEEE--eC---CeeEEEee
Q 002381 752 TRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRV--FG---QEVAELPL 826 (929)
Q Consensus 752 ~~s~La~AL~If~EcF~PiiD~rSgrDLIp~MVy~~~~~~~~f~GfY~~VL~~~~~vVsaA~lri--~g---~~~AElpl 826 (929)
+..-....-+|.++.|.|-.. .+++..+--+ .+.++.= .+|-..+|++|+...+-- +| ..+.=|--
T Consensus 10 ~~~d~~~i~~~~~~aF~~~~e----~~~v~~lR~~---~~~~~~L--slVA~d~g~vvG~Il~s~v~~~g~~~~~~~LaP 80 (171)
T COG3153 10 TPADIPAIEALTREAFGPGRE----AKLVDKLREG---GRPDLTL--SLVAEDDGEVVGHILFSPVTVGGEELGWLGLAP 80 (171)
T ss_pred ChhhHHHHHHHHHHHhhcchH----HHHHHHHHhc---CCcccce--eEEEeeCCEEEEEEEEeEEEecCcccceEEEEe
Confidence 334445666778888864322 2333322222 2222222 234467799999877643 22 14566778
Q ss_pred eEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCcEEcCHHHHHHHHHhCCceeeeCCCeeeeec
Q 002381 827 VATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKRCSQLVTFKGTSMLQKR 906 (929)
Q Consensus 827 VAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~~i~~~~l~~~~~~~~~ll~F~gt~~L~K~ 906 (929)
+||+++|||||+|++||...++.|+.+|...+++--. -.+|.+ |||.......+.- +.. +|.+.+|-+.
T Consensus 81 LaV~p~~qg~GIG~~Lvr~~le~a~~~G~~~v~vlGd---p~YY~r-fGF~~~~~~~l~~------p~~-~~~~~fl~~~ 149 (171)
T COG3153 81 LAVDPEYQGQGIGSALVREGLEALRLAGASAVVVLGD---PTYYSR-FGFEPAAGAKLYA------PGP-VPDERFLALE 149 (171)
T ss_pred EEEchhhcCCcHHHHHHHHHHHHHHHCCCCEEEEecC---cccccc-cCcEEcccccccc------CCC-CCCceEEEEE
Confidence 9999999999999999999999999999999988776 457755 9999988765411 222 6788888888
Q ss_pred ccCCc
Q 002381 907 VPACR 911 (929)
Q Consensus 907 l~~~~ 911 (929)
|...-
T Consensus 150 L~~~~ 154 (171)
T COG3153 150 LGDGA 154 (171)
T ss_pred ccCCc
Confidence 86643
No 74
>smart00249 PHD PHD zinc finger. The plant homeodomain (PHD) finger is a C4HC3 zinc-finger-like motif found in nuclear proteins thought to be involved in epigenetics and chromatin-mediated transcriptional regulation. The PHD finger binds two zinc ions using the so-called 'cross-brace' motif and is thus structurally related to the PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=97.51 E-value=0.00094 Score=63.38 Aligned_cols=80 Identities=16% Similarity=0.210 Sum_probs=62.5
Q ss_pred ceEEEEEee--CCeEEEEEEEEEe--CCeeEEEeeeEeecCccCCChhHHHHHHHHHHh-hhcCccEEEecChhh---hH
Q 002381 796 GMYCAILTV--NSSVVSAGILRVF--GQEVAELPLVATSKINHGKGYFQLLFACIEKLL-SFLRVKSIVLPAAEE---AE 867 (929)
Q Consensus 796 GfY~~VL~~--~~~vVsaA~lri~--g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l-~~lgV~~LvLpA~~~---a~ 867 (929)
|+|.+++.. ++++||...++.. ....+||. +.+.++|||+|+|+.++..+.+.+ ..+|+.+|.+....+ +.
T Consensus 55 ~~~~~~i~~~~~~~~iG~i~~~~~~~~~~~~eig-~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~ 133 (142)
T PF13302_consen 55 GYYYFAIEDKDDGEIIGFIGLYNIDKNNNWAEIG-YWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASR 133 (142)
T ss_dssp TEEEEEEEETTTTEEEEEEEEEEEETTTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHH
T ss_pred cceEEEEEeccCCceEEEeeeeecccCCCccccc-cchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHH
Confidence 355555554 3579999999544 46899999 669999999999999999999998 799999998876553 56
Q ss_pred HHHHhccCcE
Q 002381 868 SIWTDKFGFK 877 (929)
Q Consensus 868 ~~w~~kfGF~ 877 (929)
.++.+ +||+
T Consensus 134 ~~~~k-~GF~ 142 (142)
T PF13302_consen 134 RLLEK-LGFE 142 (142)
T ss_dssp HHHHH-TT-E
T ss_pred HHHHH-cCCC
Confidence 67777 9995
No 76
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=97.51 E-value=0.00064 Score=68.26 Aligned_cols=80 Identities=8% Similarity=0.081 Sum_probs=63.7
Q ss_pred EEeeCCeEEEEEEEEEeCC--eeEEEeeeEeecCccCCChhHHHHHHHHHHhh-hcCccEEEecChh---hhHHHHHhcc
Q 002381 801 ILTVNSSVVSAGILRVFGQ--EVAELPLVATSKINHGKGYFQLLFACIEKLLS-FLRVKSIVLPAAE---EAESIWTDKF 874 (929)
Q Consensus 801 VL~~~~~vVsaA~lri~g~--~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~-~lgV~~LvLpA~~---~a~~~w~~kf 874 (929)
++..+|++||.+.++.... ..+|+-. .+.++|||||||+.++.++.+.+. .+|+++|.+.... .+..++++ +
T Consensus 71 ~i~~~~~~iG~~~l~~~~~~~~~~~ig~-~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v~ek-~ 148 (179)
T PRK10151 71 MIFKEDELIGVLSFNRIEPLNKTAYIGY-WLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASNQVALR-N 148 (179)
T ss_pred EEEECCEEEEEEEEEeeccCCCceEEEE-EEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHHHHHHH-C
Confidence 3346899999999876543 5688875 689999999999999999988775 5789998876544 36778887 9
Q ss_pred CcEEcCHH
Q 002381 875 GFKKIDPE 882 (929)
Q Consensus 875 GF~~i~~~ 882 (929)
||+..+..
T Consensus 149 Gf~~~g~~ 156 (179)
T PRK10151 149 GFTLEGCL 156 (179)
T ss_pred CCEEEeEe
Confidence 99987654
No 77
>COG5034 TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
Probab=97.38 E-value=6.6e-05 Score=80.32 Aligned_cols=48 Identities=38% Similarity=1.022 Sum_probs=39.2
Q ss_pred ccCCccccccCCCCCCCCCCCCceeecC--CCC-CccCCCCCCcCcCCcccCCCCCcceEcCCCcc
Q 002381 636 AELSGCLLCRGCDFSKSGFGPRTILLCD--QCE-REFHVGCLKKHKMADLRELPKGKWFCCMDCSR 698 (929)
Q Consensus 636 ~e~~~C~iC~~~dfs~sg~~~~~LL~CD--qCd-raYHv~CL~p~~~~~L~elP~g~WfCc~~C~~ 698 (929)
++..+|+ |.+.. =+.|+-|| .|. .|||..|+ .|++.|+|.||| +.|+.
T Consensus 219 ~e~lYCf-CqqvS-------yGqMVaCDn~nCkrEWFH~~CV------GLk~pPKG~WYC-~eCk~ 269 (271)
T COG5034 219 GEELYCF-CQQVS-------YGQMVACDNANCKREWFHLECV------GLKEPPKGKWYC-PECKK 269 (271)
T ss_pred CceeEEE-ecccc-------cccceecCCCCCchhheecccc------ccCCCCCCcEeC-HHhHh
Confidence 3445687 88764 35899999 688 67999999 689999999999 89965
No 78
>KOG1473 consensus Nucleosome remodeling factor, subunit NURF301/BPTF [Chromatin structure and dynamics; Transcription]
Probab=97.35 E-value=4.8e-05 Score=93.62 Aligned_cols=130 Identities=25% Similarity=0.389 Sum_probs=84.1
Q ss_pred cCCccccccccccccCCcccccCCCCceEeccCCCcccccccCC--CCCCCCCCcccccccccccccccccccccccccc
Q 002381 535 NGLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERKRFLQHDANAVEAG 612 (929)
Q Consensus 535 ~~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~--L~~vP~g~W~Cp~C~~~~~rek~v~~n~n~~a~g 612 (929)
..-++.|..|. +.|+++||..||+.||..|.. +-.+|+..|.|--|.. ++ .|...
T Consensus 341 ~~~ddhcrf~~------------d~~~~lc~Et~prvvhlEcv~hP~~~~~s~~~e~evc~~--hk-------vngvv-- 397 (1414)
T KOG1473|consen 341 IEYDDHCRFCH------------DLGDLLCCETCPRVVHLECVFHPRFAVPSAFWECEVCNI--HK-------VNGVV-- 397 (1414)
T ss_pred eeecccccccC------------cccceeecccCCceEEeeecCCccccCCCccchhhhhhh--hc-------cCccc--
Confidence 35678999999 799999999999999999996 6688999999999973 11 11111
Q ss_pred ccccccchh-cccchhhhccc--------cccccCCccccccCCCCCCCCCCCCceeecCC-CCCccCC-CCCCcCcCCc
Q 002381 613 RVSGVDSVE-QITKRCIRIVK--------NLEAELSGCLLCRGCDFSKSGFGPRTILLCDQ-CEREFHV-GCLKKHKMAD 681 (929)
Q Consensus 613 r~~Gvd~ie-qi~krciR~~k--------d~e~e~~~C~iC~~~dfs~sg~~~~~LL~CDq-CdraYHv-~CL~p~~~~~ 681 (929)
.++.+.+ .+. .+|+.. ..-.....|.+|+. +++++-|+. |++.||. .||+..- -
T Consensus 398 --d~vl~~~K~~~--~iR~~~iG~dr~gr~ywfi~rrl~Ie~~---------det~l~yysT~pqly~ll~cLd~~~--~ 462 (1414)
T KOG1473|consen 398 --DCVLPPSKNVD--SIRHTPIGRDRYGRKYWFISRRLRIEGM---------DETLLWYYSTCPQLYHLLRCLDRTY--V 462 (1414)
T ss_pred --ccccChhhccc--ceeccCCCcCccccchhceeeeeEEecC---------CCcEEEEecCcHHHHHHHHHhchHH--H
Confidence 0111100 000 011110 00111234999984 368899997 9999999 9997421 1
Q ss_pred ccCCCCCcceEcCCCcchhHHH
Q 002381 682 LRELPKGKWFCCMDCSRINSVL 703 (929)
Q Consensus 682 L~elP~g~WfCc~~C~~i~~~L 703 (929)
-..++.+-|+| .+|-.-...|
T Consensus 463 e~~L~d~i~~~-~ee~~rqM~l 483 (1414)
T KOG1473|consen 463 EMYLCDGIWER-REEIIRQMGL 483 (1414)
T ss_pred HHhhccchhhh-HHHHHHhccc
Confidence 23578899999 7885544333
No 79
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.20 E-value=0.0015 Score=67.26 Aligned_cols=115 Identities=16% Similarity=0.170 Sum_probs=83.6
Q ss_pred CCCceecceEEEEEeeC-CeEEEEEEEEEeCC-----eeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEec-
Q 002381 789 LRGQEFGGMYCAILTVN-SSVVSAGILRVFGQ-----EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLP- 861 (929)
Q Consensus 789 ~~~~~f~GfY~~VL~~~-~~vVsaA~lri~g~-----~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLp- 861 (929)
|....=.|||.+|++.+ |+++|=|.+-.|.. .++|. .|=+++++||+|+|++|++++.+.+..+|++.++..
T Consensus 44 ~~~~~~~g~p~~V~~~~~g~v~G~a~~~~fr~r~ay~~tve~-SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~~~lva~I 122 (169)
T COG1247 44 FSGRTRDGYPVVVAEEEDGKVLGYASAGPFRERPAYRHTVEL-SIYLDPAARGKGLGKKLLQALITEARALGVRELVAGI 122 (169)
T ss_pred HHhcccCCceEEEEEcCCCeEEEEEEeeeccCccccceEEEE-EEEECcccccccHHHHHHHHHHHHHHhCCeEEEEEEE
Confidence 33334457899988765 99999998877663 35554 456899999999999999999999999999987643
Q ss_pred -ChhhhHHHHHhccCcEEcCHHHHHHHHHhCCceeeeCCCeeeeecccC
Q 002381 862 -AAEEAESIWTDKFGFKKIDPELLSIYRKRCSQLVTFKGTSMLQKRVPA 909 (929)
Q Consensus 862 -A~~~a~~~w~~kfGF~~i~~~~l~~~~~~~~~ll~F~gt~~L~K~l~~ 909 (929)
+...|.--...+|||...+....--. ..-.+-.+.+||+.|..
T Consensus 123 ~~~n~aSi~lh~~~GF~~~G~~~~vg~-----k~g~wld~~~~~~~l~~ 166 (169)
T COG1247 123 ESDNLASIALHEKLGFEEVGTFPEVGD-----KFGRWLDLVLMQLLLEE 166 (169)
T ss_pred cCCCcHhHHHHHHCCCEEecccccccc-----ccceEEeeeeeehhhcc
Confidence 23334445555699999988543321 23456677888887754
No 80
>KOG0825 consensus PHD Zn-finger protein [General function prediction only]
Probab=97.20 E-value=0.00012 Score=87.31 Aligned_cols=48 Identities=35% Similarity=0.917 Sum_probs=39.9
Q ss_pred CccccccccccccCCcccccCCCCceEeccCCCcc-cccccCC--CCCCCCCCccccccc
Q 002381 537 LGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRA-FHKECAS--LSSIPQGDWYCKYCQ 593 (929)
Q Consensus 537 ~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~a-FH~~CL~--L~~vP~g~W~Cp~C~ 593 (929)
+..-|.+|.. |...+.||+||.|..+ ||.+||+ |.++|-+.|||++|.
T Consensus 214 E~~~C~IC~~---------~DpEdVLLLCDsCN~~~YH~YCLDPdl~eiP~~eWYC~NC~ 264 (1134)
T KOG0825|consen 214 EEVKCDICTV---------HDPEDVLLLCDSCNKVYYHVYCLDPDLSESPVNEWYCTNCS 264 (1134)
T ss_pred ccccceeecc---------CChHHhheeecccccceeeccccCcccccccccceecCcch
Confidence 3456899985 2246678999999999 9999997 677999999999995
No 81
>KOG4443 consensus Putative transcription factor HALR/MLL3, involved in embryonic development [General function prediction only]
Probab=97.16 E-value=0.00016 Score=85.49 Aligned_cols=140 Identities=22% Similarity=0.441 Sum_probs=81.3
Q ss_pred cccccccCCccccccccccccCCcccccCCCCceEeccCCCcccccccCC--CCCCCCCCcccccccccccccccccccc
Q 002381 529 LLEGYKNGLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERKRFLQHDA 606 (929)
Q Consensus 529 ll~G~~~~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~--L~~vP~g~W~Cp~C~~~~~rek~v~~n~ 606 (929)
+..||--...-+|..|+. ..|...+++|+.|+-+||-+|+. .+.+|.|.|+|+.|...-+.+..+....
T Consensus 59 l~~gWrC~~crvCe~c~~---------~gD~~kf~~Ck~cDvsyh~yc~~P~~~~v~sg~~~ckk~~~c~qc~~~lpg~s 129 (694)
T KOG4443|consen 59 LSGGWRCPSCRVCEACGT---------TGDPKKFLLCKRCDVSYHCYCQKPPNDKVPSGPWLCKKCTRCRQCDSTLPGLS 129 (694)
T ss_pred hcCCcccCCceeeeeccc---------cCCcccccccccccccccccccCCccccccCcccccHHHHhhhhccccccccc
Confidence 344555555556666663 12677899999999999999996 6899999999999975443332221111
Q ss_pred ccccccccccccchhcccchhhhccccccccCCccccccCCCCCCCCCCCCceeecCCCCCccCCCCCCcCcCCcccCCC
Q 002381 607 NAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELP 686 (929)
Q Consensus 607 n~~a~gr~~Gvd~ieqi~krciR~~kd~e~e~~~C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p~~~~~L~elP 686 (929)
. ++ ... ............|.+|...- ... ..-.++.|++|.+|-|..|-.-..+.-+...-
T Consensus 130 ~----------~~----~~~--~~~~~~c~s~~~cPvc~~~Y--~~~-e~~~~~~c~~c~rwsh~~c~~~sdd~~~q~~v 190 (694)
T KOG4443|consen 130 L----------DL----QEG--YLQCAPCASLSYCPVCLIVY--QDS-ESLPMVCCSICQRWSHGGCDGISDDKYMQAQV 190 (694)
T ss_pred h----------hh----hcc--CcccccccccccCchHHHhh--hhc-cchhhHHHHHhcccccCCCCccchHHHHHHhh
Confidence 1 10 000 00000111234577777532 111 22345999999999999998654321111111
Q ss_pred CCcceEcCCCc
Q 002381 687 KGKWFCCMDCS 697 (929)
Q Consensus 687 ~g~WfCc~~C~ 697 (929)
.-.+.| ..|.
T Consensus 191 D~~~~C-S~CR 200 (694)
T KOG4443|consen 191 DLQYKC-STCR 200 (694)
T ss_pred hhhccc-ceee
Confidence 135667 7785
No 82
>KOG1973 consensus Chromatin remodeling protein, contains PHD Zn-finger [Chromatin structure and dynamics]
Probab=97.08 E-value=0.00019 Score=78.81 Aligned_cols=36 Identities=39% Similarity=1.022 Sum_probs=31.5
Q ss_pred CCceeecCC--CC-CccCCCCCCcCcCCcccCCCCCcceEcCCCcc
Q 002381 656 PRTILLCDQ--CE-REFHVGCLKKHKMADLRELPKGKWFCCMDCSR 698 (929)
Q Consensus 656 ~~~LL~CDq--Cd-raYHv~CL~p~~~~~L~elP~g~WfCc~~C~~ 698 (929)
-+.||.||. |+ .|||..|+ .|+..|.|+||| +.|..
T Consensus 229 yg~Mi~CDn~~C~~eWFH~~CV------GL~~~PkgkWyC-~~C~~ 267 (274)
T KOG1973|consen 229 YGKMIGCDNPGCPIEWFHFTCV------GLKTKPKGKWYC-PRCKA 267 (274)
T ss_pred cccccccCCCCCCcceEEEecc------ccccCCCCcccc-hhhhh
Confidence 468999997 99 99999999 578889999999 58854
No 83
>KOG0957 consensus PHD finger protein [General function prediction only]
Probab=97.04 E-value=0.00027 Score=81.10 Aligned_cols=125 Identities=28% Similarity=0.597 Sum_probs=76.4
Q ss_pred ccccccccccCCcccccCCCCceEeccCCCcccccccCCCC---CCCC-------CCccccccccccc-ccccccccccc
Q 002381 540 ICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLS---SIPQ-------GDWYCKYCQNMFE-RKRFLQHDANA 608 (929)
Q Consensus 540 ~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~---~vP~-------g~W~Cp~C~~~~~-rek~v~~n~n~ 608 (929)
+|.+|...-+. |.|+++-||.|+-..|..|++.. .+|. ..|||--|+..+. ..-.+.+|.
T Consensus 121 iCcVClg~rs~-------da~ei~qCd~CGi~VHEgCYGv~dn~si~s~~s~~stepWfCeaC~~Gvs~P~CElCPn~-- 191 (707)
T KOG0957|consen 121 ICCVCLGQRSV-------DAGEILQCDKCGINVHEGCYGVLDNVSIPSGSSDCSTEPWFCEACLYGVSLPHCELCPNR-- 191 (707)
T ss_pred EEEEeecCccc-------cccceeeccccCceecccccccccccccCCCCccCCCCchhhhhHhcCCCCCccccCCCc--
Confidence 78888865433 78999999999999999999732 3443 3599999987543 111111221
Q ss_pred ccccccccccc----------------hhcccchhhhccccccc---cCCccccccCCCCCCCCCCCCceeecC--CCCC
Q 002381 609 VEAGRVSGVDS----------------VEQITKRCIRIVKNLEA---ELSGCLLCRGCDFSKSGFGPRTILLCD--QCER 667 (929)
Q Consensus 609 ~a~gr~~Gvd~----------------ieqi~krciR~~kd~e~---e~~~C~iC~~~dfs~sg~~~~~LL~CD--qCdr 667 (929)
.|.+...|. ..++.+++.-.+.+++. --..|..|...-|.+.| ..|.|| .|..
T Consensus 192 --~GifKetDigrWvH~iCALYvpGVafg~~~~l~~Vtl~em~ysk~Gak~Cs~Ced~~fARtG----vci~CdaGMCk~ 265 (707)
T KOG0957|consen 192 --FGIFKETDIGRWVHAICALYVPGVAFGQTHTLCGVTLEEMDYSKFGAKTCSACEDKIFARTG----VCIRCDAGMCKE 265 (707)
T ss_pred --CCcccccchhhHHHHHHHhhcCccccccccccccccHHHhhhhhhccchhccccchhhhhcc----eeeeccchhhhh
Confidence 122222221 11222222222222221 12349999988777654 578888 7999
Q ss_pred ccCCCCCCcCcC
Q 002381 668 EFHVGCLKKHKM 679 (929)
Q Consensus 668 aYHv~CL~p~~~ 679 (929)
+||+.|.+-.|+
T Consensus 266 YfHVTCAQk~Gl 277 (707)
T KOG0957|consen 266 YFHVTCAQKLGL 277 (707)
T ss_pred hhhhhHHhhhcc
Confidence 999999987653
No 84
>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism]
Probab=96.85 E-value=0.013 Score=59.26 Aligned_cols=123 Identities=17% Similarity=0.153 Sum_probs=90.3
Q ss_pred hhHHHHHHHHHhhhhcCCCcccCCCCCCccccccccccCCCceecceEEEEEee-CCeEEEEEEEEEe-----CCeeEEE
Q 002381 751 ETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTV-NSSVVSAGILRVF-----GQEVAEL 824 (929)
Q Consensus 751 e~~s~La~AL~If~EcF~PiiD~rSgrDLIp~MVy~~~~~~~~f~GfY~~VL~~-~~~vVsaA~lri~-----g~~~AEl 824 (929)
+.-.+|=.-++.|.++=+|.+- |..+|-.+- |..-.|.=.+.+.++. ++++||-|.+..+ |.+.--|
T Consensus 15 ~~i~rLikela~Fek~~~~v~~--te~~l~~~~-----F~d~~~~~~~v~~ie~~~~~~aGf~~yf~~ystW~~k~~iYl 87 (163)
T KOG3216|consen 15 EDILRLIKELAEFEKLEDQVEA--TEENLARDG-----FIDPPFKHWLVAAIETSGEVVAGFALYFNNYSTWLGKQGIYL 87 (163)
T ss_pred HHHHHHHHHHHHHHHhccchhh--chhhhhhhh-----ccCCCccEEEEEEEecCCCceeEEeeeecccccccccceEEE
Confidence 3444566777888888777654 444444432 2333344455555555 8899999987753 3456677
Q ss_pred eeeEeecCccCCChhHHHHHHHHHHhhhcCccEE---EecChhhhHHHHHhccCcEEcCH
Q 002381 825 PLVATSKINHGKGYFQLLFACIEKLLSFLRVKSI---VLPAAEEAESIWTDKFGFKKIDP 881 (929)
Q Consensus 825 plVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~L---vLpA~~~a~~~w~~kfGF~~i~~ 881 (929)
-=+=|+++|||+|+|+.|++.+-+.+..+|..++ |+.--.-|+.+|++ .|++..++
T Consensus 88 eDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w~vldwN~rAi~lY~k-~gaq~l~~ 146 (163)
T KOG3216|consen 88 EDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEWVVLDWNHRAILLYEK-VGAQDLKE 146 (163)
T ss_pred EeeEecchhcccChHHHHHHHHHHHHHHcCCCcEEEEEeccchhHHHHHHH-hCccccce
Confidence 7788999999999999999999999999999874 56666679999999 99987765
No 85
>KOG0957 consensus PHD finger protein [General function prediction only]
Probab=96.79 E-value=0.00046 Score=79.36 Aligned_cols=47 Identities=34% Similarity=0.946 Sum_probs=40.0
Q ss_pred CccccccCCCCCCCCCCCCceeecCCCCCccCCCCCCcCcCCcccCCCCC----cceEcCCC
Q 002381 639 SGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKG----KWFCCMDC 696 (929)
Q Consensus 639 ~~C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p~~~~~L~elP~g----~WfCc~~C 696 (929)
-.|.+|++.. +...+++||.|...||++||.| ||+.+|+. .|.| ..|
T Consensus 545 ysCgiCkks~------dQHll~~CDtC~lhYHlGCL~P----PLTR~Pkk~kn~gWqC-sEC 595 (707)
T KOG0957|consen 545 YSCGICKKST------DQHLLTQCDTCHLHYHLGCLSP----PLTRLPKKNKNFGWQC-SEC 595 (707)
T ss_pred eeeeeeccch------hhHHHhhcchhhceeeccccCC----ccccCcccccCcceee-ccc
Confidence 3599999863 4566799999999999999998 89888864 5999 899
No 86
>PF13831 PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A.
Probab=96.54 E-value=0.00063 Score=52.98 Aligned_cols=34 Identities=44% Similarity=1.111 Sum_probs=21.0
Q ss_pred CceEeccCCCcccccccCCCCCCCCC-Cccccccc
Q 002381 560 GNLLPCDGCPRAFHKECASLSSIPQG-DWYCKYCQ 593 (929)
Q Consensus 560 G~Ll~CD~Cp~aFH~~CL~L~~vP~g-~W~Cp~C~ 593 (929)
+.|+.|+.|.-..|+.|+++..+|.+ +|+|..|+
T Consensus 2 n~ll~C~~C~v~VH~~CYGv~~~~~~~~W~C~~C~ 36 (36)
T PF13831_consen 2 NPLLFCDNCNVAVHQSCYGVSEVPDGDDWLCDRCE 36 (36)
T ss_dssp CEEEE-SSS--EEEHHHHT-SS--SS-----HHH-
T ss_pred CceEEeCCCCCcCChhhCCcccCCCCCcEECCcCC
Confidence 46899999999999999999999987 79999884
No 87
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=96.49 E-value=0.016 Score=63.67 Aligned_cols=77 Identities=16% Similarity=-0.016 Sum_probs=55.1
Q ss_pred eeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCcEEcCH
Q 002381 803 TVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDP 881 (929)
Q Consensus 803 ~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~~i~~ 881 (929)
..+|+|||.|.-.....+.+||- |+|+++|||||+++++-.++......-|+--.|=-+ ..+-----.|+||+...+
T Consensus 171 ~~~~~iVs~~~s~~~~~~~~EI~-I~T~~~yR~kGLA~~~aa~~I~~Cl~~~l~P~WDc~-N~~S~~lA~kLGf~~~~~ 247 (265)
T PF12746_consen 171 LHDGEIVSGCSSYFVYENGIEID-IETHPEYRGKGLATAVAAAFILECLENGLYPSWDCH-NLASIALAEKLGFHFDFE 247 (265)
T ss_dssp EETTEEEEEEEEEEEETTEEEEE-EEE-CCCTTSSHHHHHHHHHHHHHHHTT-EEE-EES-SHHHHHHHHHCT--EEEE
T ss_pred EECCEEEEEEEEEEEECCEEEEE-EEECHHhhcCCHHHHHHHHHHHHHHHCCCCcCeeCC-CHHHHHHHHHcCCcccce
Confidence 57899999887666677788986 799999999999999999999999999988777543 222223333599986543
No 88
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=96.43 E-value=0.0056 Score=56.87 Aligned_cols=74 Identities=16% Similarity=0.169 Sum_probs=56.7
Q ss_pred EeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccE-EEec-ChhhhHHHHHhccCcEEc
Q 002381 802 LTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKS-IVLP-AAEEAESIWTDKFGFKKI 879 (929)
Q Consensus 802 L~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~-LvLp-A~~~a~~~w~~kfGF~~i 879 (929)
|--+|.+||=.. -+..+||+.-.|.|+|||||+.+.++....+.|..+|++- ..+. +-+..+.+-.+ +||..+
T Consensus 4 lgpeG~PVSW~l----mdqtge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g~P~Y~hv~~~N~~~~r~~~~-lg~~~~ 78 (89)
T PF08444_consen 4 LGPEGNPVSWSL----MDQTGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLGFPFYGHVDEDNEASQRLSKS-LGFIFM 78 (89)
T ss_pred cCCCCCEeEEEE----ecccccccccccCHhHhcCCHHHHHHHHHHHHHHHCCCCeEeehHhccHHHHHHHHH-CCCeec
Confidence 445688888554 4578999999999999999999999999999999999984 2222 22334445455 898877
Q ss_pred C
Q 002381 880 D 880 (929)
Q Consensus 880 ~ 880 (929)
+
T Consensus 79 p 79 (89)
T PF08444_consen 79 P 79 (89)
T ss_pred C
Confidence 5
No 89
>cd04718 BAH_plant_2 BAH, or Bromo Adjacent Homology domain, plant-specific sub-family with unknown function. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.
Probab=96.26 E-value=0.002 Score=64.72 Aligned_cols=27 Identities=41% Similarity=1.032 Sum_probs=24.0
Q ss_pred ccCCCCCCcCcCCcccCCCCCcceEcCCCcch
Q 002381 668 EFHVGCLKKHKMADLRELPKGKWFCCMDCSRI 699 (929)
Q Consensus 668 aYHv~CL~p~~~~~L~elP~g~WfCc~~C~~i 699 (929)
.||+.||+| ||+++|+|+|+| +.|..-
T Consensus 1 g~H~~CL~P----pl~~~P~g~W~C-p~C~~~ 27 (148)
T cd04718 1 GFHLCCLRP----PLKEVPEGDWIC-PFCEVE 27 (148)
T ss_pred CcccccCCC----CCCCCCCCCcCC-CCCcCC
Confidence 499999998 899999999999 789653
No 90
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=96.26 E-value=0.031 Score=55.12 Aligned_cols=81 Identities=19% Similarity=0.272 Sum_probs=57.5
Q ss_pred ceEEEEEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecCh------hhhHHH
Q 002381 796 GMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAA------EEAESI 869 (929)
Q Consensus 796 GfY~~VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~------~~a~~~ 869 (929)
-+|++ .-|+.++||+.+.+.|. -|+|--+.|++.=||.|.|..|++.+.+.+. +|...++.+. ..+...
T Consensus 39 ~l~aA--rFNdRlLgAv~v~~~~~-~~~L~~l~VRevTRrRGVG~yLlee~~rq~p--~i~~w~l~~~~~~~~~~~~~~~ 113 (128)
T PF12568_consen 39 RLFAA--RFNDRLLGAVKVTISGQ-QAELSDLCVREVTRRRGVGLYLLEEVLRQLP--DIKHWWLADEGVEPQDRAVMAA 113 (128)
T ss_dssp EEEEE--EETTEEEEEEEEEEETT-EEEEEEEEE-TT-SSSSHHHHHHHHHHHHS---S--EEEE--TT-S--THHHHHH
T ss_pred eEEEE--EechheeeeEEEEEcCc-ceEEeeEEEeeccccccHHHHHHHHHHHHCC--CCcEEEEecCCCcccchHHHHH
Confidence 36666 78999999999999875 7999999999999999999999999999994 4555555433 233444
Q ss_pred HHhccCcEEcCH
Q 002381 870 WTDKFGFKKIDP 881 (929)
Q Consensus 870 w~~kfGF~~i~~ 881 (929)
+...+||...++
T Consensus 114 Fm~a~GF~~~~~ 125 (128)
T PF12568_consen 114 FMQACGFSAQSD 125 (128)
T ss_dssp HHHHHT-EE-SS
T ss_pred HHHHcCccccCC
Confidence 555599987653
No 91
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=96.17 E-value=0.0066 Score=50.99 Aligned_cols=44 Identities=16% Similarity=0.120 Sum_probs=39.5
Q ss_pred eEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCc
Q 002381 827 VATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGF 876 (929)
Q Consensus 827 VAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF 876 (929)
++|+++|||+|+|+.|+..+++.+...|+. ....+..+|.. +||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~g~~-----~~~~~~~~~~~-~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARKRGIS-----LNRLALEVYEK-NGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHHcCce-----ehHHHHHHHHh-cCC
Confidence 999999999999999999999999998887 55567788888 888
No 92
>KOG0955 consensus PHD finger protein BR140/LIN-49 [General function prediction only]
Probab=96.15 E-value=0.0032 Score=79.38 Aligned_cols=57 Identities=25% Similarity=0.677 Sum_probs=44.1
Q ss_pred ccCCccccccCCCCCCCCCCCCceeecCCCCCccCCCCCCcCcCCcccCCCCCcceEcCCCcchhHHH
Q 002381 636 AELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVL 703 (929)
Q Consensus 636 ~e~~~C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p~~~~~L~elP~g~WfCc~~C~~i~~~L 703 (929)
.+...|.+|.+++.. +-+.+++||.|+.++|.+|.. .+-+|+|.|+| ..|-.-.+..
T Consensus 217 ~~D~~C~iC~~~~~~----n~n~ivfCD~Cnl~VHq~Cyg------i~~ipeg~WlC-r~Cl~s~~~~ 273 (1051)
T KOG0955|consen 217 EEDAVCCICLDGECQ----NSNVIVFCDGCNLAVHQECYG------IPFIPEGQWLC-RRCLQSPQRP 273 (1051)
T ss_pred CCCccceeecccccC----CCceEEEcCCCcchhhhhccC------CCCCCCCcEee-hhhccCcCcc
Confidence 345679999998632 346899999999999999995 34578999999 8885544433
No 93
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=96.14 E-value=0.026 Score=50.86 Aligned_cols=58 Identities=12% Similarity=0.029 Sum_probs=49.9
Q ss_pred EEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEE
Q 002381 801 ILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIV 859 (929)
Q Consensus 801 VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~Lv 859 (929)
.+..+|+.+|...++. ..++..|--.-|.+++||||+++.||+++.+.++.-|.+-+-
T Consensus 3 ~~~~~g~~~a~l~Y~~-~~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~kv~p 60 (78)
T PF14542_consen 3 ELKDDGEEIAELTYRE-DGGVIVITHTEVPPELRGQGIAKKLVEAALDYARENGLKVVP 60 (78)
T ss_dssp EEESSTTEEEEEEEEE-SSSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT-EEEE
T ss_pred EEEECCEEEEEEEEEe-CCCEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCEEEE
Confidence 4567789999999987 668999999999999999999999999999999999987543
No 94
>KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only]
Probab=96.10 E-value=0.0045 Score=62.55 Aligned_cols=61 Identities=20% Similarity=0.258 Sum_probs=52.0
Q ss_pred eeEEEeeeEeecCccCCChhHHHHHH-HHHHhhhcCccEEEecChhhhHHHHHhccCcEEcCH
Q 002381 820 EVAELPLVATSKINHGKGYFQLLFAC-IEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDP 881 (929)
Q Consensus 820 ~~AElplVAT~~~yRgqG~gr~L~~~-IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~~i~~ 881 (929)
.-+.|-.+|+.++||.||++..|+.. |..+-..-=+++.+|=+-+.+++||++ |||+.+++
T Consensus 100 ~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h~pLvPFYEr-~gFk~vgp 161 (190)
T KOG4144|consen 100 HNIHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICHDPLVPFYER-FGFKAVGP 161 (190)
T ss_pred cceeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeecCCccchhHh-cCceeecc
Confidence 34778899999999999999999877 444445555778999999999999999 99999998
No 95
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=96.07 E-value=0.0078 Score=73.90 Aligned_cols=58 Identities=16% Similarity=0.095 Sum_probs=49.4
Q ss_pred EEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEe--cChhhhHHHHHhccCcEEcCH
Q 002381 822 AELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVL--PAAEEAESIWTDKFGFKKIDP 881 (929)
Q Consensus 822 AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvL--pA~~~a~~~w~~kfGF~~i~~ 881 (929)
+.|-+|||+|++|++|||++|++.+.++++ .|+..|-. .+.++...||.+ .||.++--
T Consensus 532 ~RIvRIAvhPe~q~~GiGsrlL~~l~~~a~-~~~DwlgvsFG~t~~L~rFW~r-nGF~pVhl 591 (758)
T COG1444 532 WRIVRIAVHPELQRMGIGSRLLALLIEEAR-KGLDWLGVSFGYTEELLRFWLR-NGFVPVHL 591 (758)
T ss_pred eeEEEEEeCHHHHhcCHHHHHHHHHHHHHh-cCCCEEeeccCCCHHHHHHHHH-cCeEEEEe
Confidence 678899999999999999999999999986 55555544 478899999999 99998754
No 96
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=95.99 E-value=0.044 Score=53.72 Aligned_cols=88 Identities=17% Similarity=0.206 Sum_probs=67.1
Q ss_pred cceEEEEEeeCC--eEEEEEEEEEeC----CeeEEEeeeEeecCccCCChhHHHHHHHHHHhhh-cCccEEEecChhh--
Q 002381 795 GGMYCAILTVNS--SVVSAGILRVFG----QEVAELPLVATSKINHGKGYFQLLFACIEKLLSF-LRVKSIVLPAAEE-- 865 (929)
Q Consensus 795 ~GfY~~VL~~~~--~vVsaA~lri~g----~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~-lgV~~LvLpA~~~-- 865 (929)
.+.|.++...++ ++||.+.+.... .+.+|+-..- .+.|+|||++...+.++.+.+-. +|+.+|++-....
T Consensus 64 ~~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~ig~~l-~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~ 142 (187)
T COG1670 64 GGAFAIELKATGDGELIGVIGLSDIDRAANGDLAEIGYWL-DPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENE 142 (187)
T ss_pred CceEEEEEEeCCCCeEEEEEEEEEeccccccceEEEEEEE-ChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCH
Confidence 345666656544 999999998655 4677777666 99999999999999999888665 9999998876654
Q ss_pred -hHHHHHhccCcEEcCHHHH
Q 002381 866 -AESIWTDKFGFKKIDPELL 884 (929)
Q Consensus 866 -a~~~w~~kfGF~~i~~~~l 884 (929)
+...+.+ +||+..+....
T Consensus 143 ~S~rv~ek-~Gf~~eg~~~~ 161 (187)
T COG1670 143 ASIRVYEK-LGFRLEGELRQ 161 (187)
T ss_pred HHHHHHHH-cCChhhhhhhh
Confidence 4556666 99998776443
No 97
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=95.98 E-value=0.026 Score=62.36 Aligned_cols=79 Identities=20% Similarity=0.298 Sum_probs=69.9
Q ss_pred eEEEEEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCc
Q 002381 797 MYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGF 876 (929)
Q Consensus 797 fY~~VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF 876 (929)
.++++...++++|+|+++ +|. -|.-|||++.+||-|+.-.|+..+-.++-++|.-.||+-+-++-..++.. +||
T Consensus 37 ~~v~~~~~~~~iiacGsi--aGn---vikcvAvs~s~qGeGl~lkl~TeLin~ay~~g~~hLFiyTKp~~~~lFk~-~GF 110 (352)
T COG3053 37 YFVAIYRDNEEIIACGSI--AGN---VIKCVAVSESLQGEGLALKLVTELINLAYERGRTHLFIYTKPEYAALFKQ-CGF 110 (352)
T ss_pred EEEEEEcCCCcEEEeccc--ccc---eeEEEEechhcccccHHHHHHHHHHHHHHHcCCceEEEEechhHHHHHHh-CCc
Confidence 445554566999999994 564 38999999999999999999999999999999999999999999999999 999
Q ss_pred EEcCH
Q 002381 877 KKIDP 881 (929)
Q Consensus 877 ~~i~~ 881 (929)
..+..
T Consensus 111 ~~i~~ 115 (352)
T COG3053 111 SEIAS 115 (352)
T ss_pred eEeec
Confidence 99877
No 98
>KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only]
Probab=95.94 E-value=0.024 Score=59.26 Aligned_cols=84 Identities=21% Similarity=0.279 Sum_probs=63.2
Q ss_pred eEEEEEeeCCeEEEEEEEEE---eCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEec---ChhhhHHHH
Q 002381 797 MYCAILTVNSSVVSAGILRV---FGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLP---AAEEAESIW 870 (929)
Q Consensus 797 fY~~VL~~~~~vVsaA~lri---~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLp---A~~~a~~~w 870 (929)
-|.......+++||-+.+|. +|..++=.-=|-+.+.|||+|+|+.|++.+|.++...+.+.++|- .-.-|.+||
T Consensus 93 ~Yi~a~~~~~~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR~kGiGk~LL~~l~~~a~~~~~~kVmLTVf~~N~~al~Fy 172 (202)
T KOG2488|consen 93 RYICAWNNKSKLVGFTMFRFTVDTGDPVLYCYEVQVASAYRGKGIGKFLLDTLEKLADSRHMRKVMLTVFSENIRALGFY 172 (202)
T ss_pred eEEEEEcCCCceeeEEEEEEEcccCCeEEEEEEEeehhhhhccChHHHHHHHHHHHHHHHHhhhheeeeecccchhHHHH
Confidence 34444444458999999987 343454444455677899999999999999999999988866554 455689999
Q ss_pred HhccCcEEcCH
Q 002381 871 TDKFGFKKIDP 881 (929)
Q Consensus 871 ~~kfGF~~i~~ 881 (929)
.+ +||-+...
T Consensus 173 ~~-~gf~~~~~ 182 (202)
T KOG2488|consen 173 HR-LGFVVDEE 182 (202)
T ss_pred HH-cCcccCCC
Confidence 99 99987765
No 99
>cd04718 BAH_plant_2 BAH, or Bromo Adjacent Homology domain, plant-specific sub-family with unknown function. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.
Probab=95.92 E-value=0.0037 Score=62.91 Aligned_cols=25 Identities=40% Similarity=1.132 Sum_probs=22.9
Q ss_pred ccccccCC--CCCCCCCCccccccccc
Q 002381 571 AFHKECAS--LSSIPQGDWYCKYCQNM 595 (929)
Q Consensus 571 aFH~~CL~--L~~vP~g~W~Cp~C~~~ 595 (929)
+||..||+ |+.+|+|+|+||.|...
T Consensus 1 g~H~~CL~Ppl~~~P~g~W~Cp~C~~~ 27 (148)
T cd04718 1 GFHLCCLRPPLKEVPEGDWICPFCEVE 27 (148)
T ss_pred CcccccCCCCCCCCCCCCcCCCCCcCC
Confidence 59999997 89999999999999864
No 100
>KOG1245 consensus Chromatin remodeling complex WSTF-ISWI, large subunit (contains heterochromatin localization, PHD and BROMO domains) [Chromatin structure and dynamics]
Probab=95.79 E-value=0.0024 Score=83.07 Aligned_cols=55 Identities=35% Similarity=0.834 Sum_probs=47.0
Q ss_pred ccCCccccccCCCCCCCCCCCCceeecCCCCCccCCCCCCcCcCCcccCCCCCcceEcCCCcchhH
Q 002381 636 AELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINS 701 (929)
Q Consensus 636 ~e~~~C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p~~~~~L~elP~g~WfCc~~C~~i~~ 701 (929)
.....|.+|+..+ +...|+.||.|..+||..|++| .+..+|.++||| +.|..-+.
T Consensus 1106 ~~~~~c~~cr~k~------~~~~m~lc~~c~~~~h~~C~rp----~~~~~~~~dW~C-~~c~~e~~ 1160 (1404)
T KOG1245|consen 1106 AVNALCKVCRRKK------QDEKMLLCDECLSGFHLFCLRP----ALSSVPPGDWMC-PSCRKEHR 1160 (1404)
T ss_pred cchhhhhhhhhcc------cchhhhhhHhhhhhHHHHhhhh----hhccCCcCCccC-Cccchhhh
Confidence 3456799999753 5678999999999999999998 688999999999 89987765
No 101
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=95.77 E-value=0.023 Score=53.85 Aligned_cols=62 Identities=18% Similarity=0.117 Sum_probs=56.2
Q ss_pred cceEEEEEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEE
Q 002381 795 GGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSI 858 (929)
Q Consensus 795 ~GfY~~VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~L 858 (929)
.++|++ ..+|+.++.++..-.|.+..-|.---|..++||||+++.|+....+.++.-|.+-+
T Consensus 15 ~~~y~~--~~~G~~~~e~~y~~~~~~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~kii 76 (99)
T COG2388 15 NGRYVL--TDEGEVIGEATYYDRGENLIIIDHTYVPDELRGQGIAQKLVEKALEEAREAGLKII 76 (99)
T ss_pred ceEEEE--ecCCcEEEEEEEecCCCCEEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcCCeEc
Confidence 567765 88999999999988899999999999999999999999999999999999998643
No 102
>KOG0956 consensus PHD finger protein AF10 [General function prediction only]
Probab=95.61 E-value=0.0053 Score=73.21 Aligned_cols=52 Identities=29% Similarity=0.925 Sum_probs=42.8
Q ss_pred cCCccccccCCCCCCCCCCCCceeecC--CCCCccCCCCCCcCcCCcccCCCCCcceEcCCCcch
Q 002381 637 ELSGCLLCRGCDFSKSGFGPRTILLCD--QCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRI 699 (929)
Q Consensus 637 e~~~C~iC~~~dfs~sg~~~~~LL~CD--qCdraYHv~CL~p~~~~~L~elP~g~WfCc~~C~~i 699 (929)
.+++|-+|.+- -|-.++.|+.|| .|..+.|..|. .+.++|.|.||| ..|..-
T Consensus 4 MVGGCCVCSDE----rGWaeNPLVYCDG~nCsVAVHQaCY------GIvqVPtGpWfC-rKCesq 57 (900)
T KOG0956|consen 4 MVGGCCVCSDE----RGWAENPLVYCDGHNCSVAVHQACY------GIVQVPTGPWFC-RKCESQ 57 (900)
T ss_pred cccceeeecCc----CCCccCceeeecCCCceeeeehhcc------eeEecCCCchhh-hhhhhh
Confidence 46789999863 345678899999 79999999999 467899999999 888543
No 103
>KOG0954 consensus PHD finger protein [General function prediction only]
Probab=94.75 E-value=0.013 Score=70.61 Aligned_cols=52 Identities=31% Similarity=0.758 Sum_probs=42.9
Q ss_pred cCCccccccCCCCCCCCCCCCceeecCCCCCccCCCCCCcCcCCcccCCCCCcceEcCCCcch
Q 002381 637 ELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRI 699 (929)
Q Consensus 637 e~~~C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p~~~~~L~elP~g~WfCc~~C~~i 699 (929)
+...|.+|+..| ....+.|++||.|.-..|..|. .+.++|.+.|.| ..|...
T Consensus 270 edviCDvCrspD----~e~~neMVfCd~Cn~cVHqaCy------GIle~p~gpWlC-r~Calg 321 (893)
T KOG0954|consen 270 EDVICDVCRSPD----SEEANEMVFCDKCNICVHQACY------GILEVPEGPWLC-RTCALG 321 (893)
T ss_pred ccceeceecCCC----ccccceeEEeccchhHHHHhhh------ceeecCCCCeee-hhcccc
Confidence 445699999876 2356889999999999999999 467889999999 778554
No 104
>KOG1245 consensus Chromatin remodeling complex WSTF-ISWI, large subunit (contains heterochromatin localization, PHD and BROMO domains) [Chromatin structure and dynamics]
Probab=94.72 E-value=0.0075 Score=78.69 Aligned_cols=52 Identities=35% Similarity=0.905 Sum_probs=44.5
Q ss_pred cCCccccccccccccCCcccccCCCCceEeccCCCcccccccCC--CCCCCCCCccccccccc
Q 002381 535 NGLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNM 595 (929)
Q Consensus 535 ~~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~--L~~vP~g~W~Cp~C~~~ 595 (929)
....+.|.+|.... +..+|+.|+.|...||..|+. +..+|.++|+||.|+..
T Consensus 1105 s~~~~~c~~cr~k~---------~~~~m~lc~~c~~~~h~~C~rp~~~~~~~~dW~C~~c~~e 1158 (1404)
T KOG1245|consen 1105 SAVNALCKVCRRKK---------QDEKMLLCDECLSGFHLFCLRPALSSVPPGDWMCPSCRKE 1158 (1404)
T ss_pred ccchhhhhhhhhcc---------cchhhhhhHhhhhhHHHHhhhhhhccCCcCCccCCccchh
Confidence 35778999999742 345899999999999999996 78999999999999864
No 105
>KOG3138 consensus Predicted N-acetyltransferase [General function prediction only]
Probab=94.48 E-value=0.033 Score=58.29 Aligned_cols=62 Identities=18% Similarity=0.174 Sum_probs=51.6
Q ss_pred eEEEeeeEeecCccCCChhHHHHHHHHHHhhhcC-ccEEEecCh---hhhHHHHHhccCcEEcCHHH
Q 002381 821 VAELPLVATSKINHGKGYFQLLFACIEKLLSFLR-VKSIVLPAA---EEAESIWTDKFGFKKIDPEL 883 (929)
Q Consensus 821 ~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lg-V~~LvLpA~---~~a~~~w~~kfGF~~i~~~~ 883 (929)
+.-+-.++|.+.||.+|+|+.|++.+.+.+...+ .+++.|.++ ..|..||++ +||+.+..-.
T Consensus 89 ~~yi~~Lgvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y~~-~gF~~~~~~~ 154 (187)
T KOG3138|consen 89 VIYILSLGVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFYEK-RGFEIVERLK 154 (187)
T ss_pred eeEEEeecccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHHHh-cCceEeeccc
Confidence 5778899999999999999999999999999998 676666543 357777777 9999887643
No 106
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=94.43 E-value=0.057 Score=61.07 Aligned_cols=84 Identities=18% Similarity=0.199 Sum_probs=66.0
Q ss_pred CceecceEEEEEeeCCeEEEEEEEEEe------CC---eeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEec
Q 002381 791 GQEFGGMYCAILTVNSSVVSAGILRVF------GQ---EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLP 861 (929)
Q Consensus 791 ~~~f~GfY~~VL~~~~~vVsaA~lri~------g~---~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLp 861 (929)
.+++.++|.+ +.+.++++- |++. |. ..|-|-.||+.|+|||+|+-|+|+....+..++.|+.-.+|.
T Consensus 35 il~~~n~~vi--~~nqkl~s~--L~i~~f~~~f~~q~l~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~kG~p~s~L~ 110 (389)
T COG4552 35 ILAEPNSYVI--YMNQKLASR--LHIPPFIFWFGNQVLPTAGIAGVASAPTYRRRGALRALLAHSLREIARKGYPVSALH 110 (389)
T ss_pred hccCCcceEE--eehhhhhhc--ccccchheeeCCeeeeccceEEEEechhhccCcHHHHHHHHHHHHHHHcCCeeEEec
Confidence 3566667754 777777653 3332 33 356788899999999999999999999999999999988887
Q ss_pred ChhhhHHHHHhccCcEEcCH
Q 002381 862 AAEEAESIWTDKFGFKKIDP 881 (929)
Q Consensus 862 A~~~a~~~w~~kfGF~~i~~ 881 (929)
+. ..+||.+ |||..-+.
T Consensus 111 P~--s~~iYrK-fGye~asn 127 (389)
T COG4552 111 PF--SGGIYRK-FGYEYASN 127 (389)
T ss_pred cC--chhhHhh-ccccccce
Confidence 65 3679998 99987665
No 107
>COG5141 PHD zinc finger-containing protein [General function prediction only]
Probab=94.24 E-value=0.019 Score=66.57 Aligned_cols=47 Identities=32% Similarity=0.826 Sum_probs=36.5
Q ss_pred CccccccCCCCCCCCCCCCceeecCCCCCccCCCCCCcCcCCcccCCCCCcceEcCCC
Q 002381 639 SGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDC 696 (929)
Q Consensus 639 ~~C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p~~~~~L~elP~g~WfCc~~C 696 (929)
+.|.+|...+ ..+.++++.||.|+-+.|..|.. ..-+|+|.|+| ..|
T Consensus 194 ~~C~~c~~t~----~eN~naiVfCdgC~i~VHq~CYG------I~f~peG~WlC-rkC 240 (669)
T COG5141 194 DICTKCTSTH----NENSNAIVFCDGCEICVHQSCYG------IQFLPEGFWLC-RKC 240 (669)
T ss_pred hhhHhccccc----cCCcceEEEecCcchhhhhhccc------ceecCcchhhh-hhh
Confidence 4588888654 22457899999999999999994 44578999998 444
No 108
>KOG4323 consensus Polycomb-like PHD Zn-finger protein [General function prediction only]
Probab=94.20 E-value=0.025 Score=66.05 Aligned_cols=49 Identities=29% Similarity=0.813 Sum_probs=38.6
Q ss_pred ccccccccccCCcccccCCCCceEeccCCCcccccccCC------CCCCCCCCccccccccc
Q 002381 540 ICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECAS------LSSIPQGDWYCKYCQNM 595 (929)
Q Consensus 540 ~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~------L~~vP~g~W~Cp~C~~~ 595 (929)
.|.+|....++ ....||.|++|...||+.|.. +-.-+.+.|||..|...
T Consensus 170 qc~vC~~g~~~-------~~NrmlqC~~C~~~fHq~Chqp~i~~~l~~D~~~~w~C~~C~~~ 224 (464)
T KOG4323|consen 170 QCSVCYCGGPG-------AGNRMLQCDKCRQWYHQACHQPLIKDELAGDPFYEWFCDVCNRG 224 (464)
T ss_pred eeeeeecCCcC-------ccceeeeecccccHHHHHhccCCCCHhhccCccceEeehhhccc
Confidence 38888865554 456999999999999999995 22336778999999864
No 109
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=93.93 E-value=0.41 Score=45.26 Aligned_cols=66 Identities=8% Similarity=-0.162 Sum_probs=57.7
Q ss_pred eEEEEEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecCh
Q 002381 797 MYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAA 863 (929)
Q Consensus 797 fY~~VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~ 863 (929)
...++++.+|++||++.....+ +.+..-..+++++|++.|.|..|+..+.+.+.+.|++.+-+...
T Consensus 71 ~~l~~~~~~g~~va~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~~g~~~~d~g~g 136 (142)
T PF13480_consen 71 LRLFVLYDGGEPVAFALGFRHG-GTLYYWYGGYDPEYRKYSPGRLLLWEAIRWAIERGLRYFDFGGG 136 (142)
T ss_pred EEEEEEEECCEEEEEEEEEEEC-CEEEEEEEEECHhhHhCCHHHHHHHHHHHHHHHCCCCEEEECCC
Confidence 5666778899999999776655 68889999999999999999999999999999999999887654
No 110
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=93.23 E-value=0.47 Score=51.48 Aligned_cols=120 Identities=15% Similarity=0.083 Sum_probs=79.6
Q ss_pred HHHHHHHHhhhhcCCCcccCCCCCCccccccccccCCCceecceEEEEEee-CCeEEEEEEEEEe---------------
Q 002381 754 LLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTV-NSSVVSAGILRVF--------------- 817 (929)
Q Consensus 754 s~La~AL~If~EcF~PiiD~rSgrDLIp~MVy~~~~~~~~f~GfY~~VL~~-~~~vVsaA~lri~--------------- 817 (929)
..+..+..+=++-|. +. -|.++..+---+.++...|-..-|.++... +|++||+++|...
T Consensus 17 ~~~~~~~~lR~~VFv---~e-~gw~~~~~~~~~~E~D~~D~~~~h~l~~~~~~g~vvG~~RLl~t~~~~p~~~~p~e~~~ 92 (241)
T TIGR03694 17 ELLEEAFRLRYQVYC---EE-LGFEPPSDYPDGLETDEYDAHSVHSLLRHRRTGTFVGCVRLVLPNSSDPDQPFPFEKHC 92 (241)
T ss_pred HHHHHHHHHHHHHHH---Hh-cCCCCCCCCCCCCcCCCCCCCCcEEEEEECCCCCEEEEEEEeccccccccccccHHHHh
Confidence 345666666666662 11 122211100013344444444556555543 5899999998642
Q ss_pred ---------------CCeeEEEeeeEeecCccCC--------C--------------------hhHHHHHHHHHHhhhcC
Q 002381 818 ---------------GQEVAELPLVATSKINHGK--------G--------------------YFQLLFACIEKLLSFLR 854 (929)
Q Consensus 818 ---------------g~~~AElplVAT~~~yRgq--------G--------------------~gr~L~~~IE~~l~~lg 854 (929)
+..++|+-++|++++||+. | +...|+.++-+.+...|
T Consensus 93 ~~~~~~~~~~~~~~~~~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~G 172 (241)
T TIGR03694 93 SHSLDGLFLDPRRLPRSRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLGLIALSSANG 172 (241)
T ss_pred ccccchhhcCccccCCCceEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHHHHHHHHHCC
Confidence 1369999999999999974 2 44679999999999999
Q ss_pred ccEEEecChhhhHHHHHhccCcEE
Q 002381 855 VKSIVLPAAEEAESIWTDKFGFKK 878 (929)
Q Consensus 855 V~~LvLpA~~~a~~~w~~kfGF~~ 878 (929)
+++++.-+.+.....+.+ +||..
T Consensus 173 i~~~~~v~~~~l~r~l~r-~G~~~ 195 (241)
T TIGR03694 173 ITHWYAIMEPRLARLLSR-FGIQF 195 (241)
T ss_pred CcEEEEEeCHHHHHHHHH-hCCce
Confidence 999998888877887765 88643
No 111
>KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only]
Probab=92.67 E-value=0.15 Score=52.06 Aligned_cols=58 Identities=10% Similarity=0.125 Sum_probs=46.7
Q ss_pred eEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEe---cChhhhHHHHHhccCcEEc
Q 002381 821 VAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVL---PAAEEAESIWTDKFGFKKI 879 (929)
Q Consensus 821 ~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvL---pA~~~a~~~w~~kfGF~~i 879 (929)
-+++--++|.|.||++|++..||+.+|+.....+.=-+.| -.-.-|..+|++ |||.+.
T Consensus 69 h~HvTAltVap~~Rrl~la~~lm~~led~~d~~~a~fvDLfVr~sN~iAI~mYkk-LGY~~Y 129 (173)
T KOG3234|consen 69 HGHVTALTVAPDYRRLGLAAKLMDTLEDVSDVDNAYFVDLFVRVSNQIAIDMYKK-LGYSVY 129 (173)
T ss_pred eeEEEEEEechhHHHHHHHHHHHHHHHHHHHhhhhheeeeeeeccchhHHHHHHh-cCceEE
Confidence 4678888999999999999999999999987775444333 344458999999 999863
No 112
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=92.31 E-value=0.11 Score=60.63 Aligned_cols=51 Identities=16% Similarity=0.228 Sum_probs=44.8
Q ss_pred ecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCcEEcCH
Q 002381 830 SKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDP 881 (929)
Q Consensus 830 ~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~~i~~ 881 (929)
...+|+||||+.||+..|+.+++-|.++|.+-+-..+...|.+ |||...+.
T Consensus 459 ~~~~QH~G~G~~L~~~AE~ia~ee~~~ki~viSgiG~ReYy~k-~GY~~~gp 509 (515)
T COG1243 459 EDEWQHRGYGRELLEEAERIAREEGAKKILVISGIGVREYYRK-LGYELDGP 509 (515)
T ss_pred cchhhcccHHHHHHHHHHHHHHhhccccEEEEecccHHHHHHH-hCccccCC
Confidence 5789999999999999999999999999887777788888886 99987654
No 113
>KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only]
Probab=92.05 E-value=0.45 Score=48.81 Aligned_cols=81 Identities=14% Similarity=0.208 Sum_probs=63.0
Q ss_pred EEe-eCCeEEEEEEEEEeC-----CeeEEEeeeEeecCccCCChhHHHHHHHHH-HhhhcCccEEEecChh---hhHHHH
Q 002381 801 ILT-VNSSVVSAGILRVFG-----QEVAELPLVATSKINHGKGYFQLLFACIEK-LLSFLRVKSIVLPAAE---EAESIW 870 (929)
Q Consensus 801 VL~-~~~~vVsaA~lri~g-----~~~AElplVAT~~~yRgqG~gr~L~~~IE~-~l~~lgV~~LvLpA~~---~a~~~w 870 (929)
|.+ .+|.|||-.....+. ..-.+|-.+||...||+.|+++.||..-.+ ++...+.+++-|.-+. .|...|
T Consensus 45 VA~D~~gkiVGYvlAkmee~p~~~~~hGhItSlaV~rs~RrlGla~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl~LY 124 (193)
T KOG3235|consen 45 VAEDENGKIVGYVLAKMEEDPDDEPPHGHITSLAVKRSYRRLGLAQKLMNQASRAMVEVYEAKYVSLHVRKSNRAALHLY 124 (193)
T ss_pred EEEcCCCcEEEEeeeehhhcccCCCCCCeeEEeeehhhHHHhhHHHHHHHHHHHHHHHhhcceEEEEeeecccHHHHHhh
Confidence 335 578999977766554 225789999999999999999999976544 4556677788887554 589999
Q ss_pred HhccCcEEcCH
Q 002381 871 TDKFGFKKIDP 881 (929)
Q Consensus 871 ~~kfGF~~i~~ 881 (929)
++.+||.+.+-
T Consensus 125 ~~tl~F~v~ev 135 (193)
T KOG3235|consen 125 KNTLGFVVCEV 135 (193)
T ss_pred hhccceEEeec
Confidence 99999998765
No 114
>smart00258 SAND SAND domain.
Probab=91.96 E-value=0.13 Score=46.35 Aligned_cols=50 Identities=24% Similarity=0.362 Sum_probs=40.7
Q ss_pred eCCeEEeeCcCCCCceeeCcchhhhcccc-cccCccccccccCCccHHHHHHH
Q 002381 260 RDGGILCSCSLCNGCRVIPPSKFEIHACK-QYRRASQYICFENGKSLLEVLRA 311 (929)
Q Consensus 260 ~~~GilC~C~~C~~~~v~s~s~FE~HAG~-~~~~p~~~I~lenG~sL~~v~~~ 311 (929)
..+|+.+-|..|++ +-+||++||.|||. ++++=-..|.. ||.+|+.+|+.
T Consensus 19 f~~G~~~kCI~~~~-~~~TP~eFe~~~g~~~~K~WK~sIR~-~g~~Lr~L~~~ 69 (73)
T smart00258 19 FKCGISVKCIQYED-KWFTPKEFEIEGGKGKSKDWKRSIRC-GGSSLRTLMEN 69 (73)
T ss_pred hhcCcccCCccCCC-EEEChHHHHhhcCCcccCCcchheeE-CCccHHHHHHc
Confidence 45599999999986 89999999999995 46665666654 68999998874
No 115
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=91.92 E-value=0.9 Score=47.62 Aligned_cols=83 Identities=17% Similarity=0.179 Sum_probs=58.2
Q ss_pred EEEEEeeCCeEEEEEEEEEeC-------CeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHH
Q 002381 798 YCAILTVNSSVVSAGILRVFG-------QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIW 870 (929)
Q Consensus 798 Y~~VL~~~~~vVsaA~lri~g-------~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w 870 (929)
|.+++.-.+.+|++..+-.+. ..+--+.+.=+.|+|||+|+++.+...+-+.+.. +=...++.+...+..+|
T Consensus 48 ~~~~~KgT~~via~~~~~~~~~l~~~~d~pl~~~G~~w~~p~yRg~~~~kl~~~~~~~~~~~-~~~N~~~~~~~~~~~~w 126 (181)
T PF06852_consen 48 VLTCLKGTDRVIATVHLIRFDPLNPSPDKPLQFIGFFWIDPEYRGKGIMKLQDDICMDELDS-VDDNSVAQGNVKMSNFW 126 (181)
T ss_pred EEEEEcCCCcEEEEEEEEEeccCCCCCCCCeEEEeeeeeCCcccCcchHHHHHHHHHHHhcc-CCCceeeecCHHHHHHH
Confidence 444444446788877764332 2377777777999999999997444444445555 33456677888999999
Q ss_pred HhccCcEEcCH
Q 002381 871 TDKFGFKKIDP 881 (929)
Q Consensus 871 ~~kfGF~~i~~ 881 (929)
.+-|||..++.
T Consensus 127 ~k~~G~~~~~h 137 (181)
T PF06852_consen 127 HKMFGFDDYGH 137 (181)
T ss_pred HHHhCCCCCcc
Confidence 99999988887
No 116
>PF13831 PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A.
Probab=91.85 E-value=0.022 Score=44.51 Aligned_cols=33 Identities=36% Similarity=1.110 Sum_probs=17.6
Q ss_pred CceeecCCCCCccCCCCCCcCcCCcccCCCCC-cceEcCCC
Q 002381 657 RTILLCDQCEREFHVGCLKKHKMADLRELPKG-KWFCCMDC 696 (929)
Q Consensus 657 ~~LL~CDqCdraYHv~CL~p~~~~~L~elP~g-~WfCc~~C 696 (929)
+.||.|+.|.-..|..|.. +..+|.+ .|+| ..|
T Consensus 2 n~ll~C~~C~v~VH~~CYG------v~~~~~~~~W~C-~~C 35 (36)
T PF13831_consen 2 NPLLFCDNCNVAVHQSCYG------VSEVPDGDDWLC-DRC 35 (36)
T ss_dssp CEEEE-SSS--EEEHHHHT-------SS--SS------HHH
T ss_pred CceEEeCCCCCcCChhhCC------cccCCCCCcEEC-CcC
Confidence 4699999999999999984 3344555 7999 544
No 117
>PF01342 SAND: SAND domain; InterPro: IPR000770 The SAND domain (named after Sp100, AIRE-1, NucP41/75, DEAF-1) is a conserved ~80 residue region found in a number of nuclear proteins, many of which function in chromatin-dependent transcriptional control. These include proteins linked to various human diseases, such as the Sp100 (Speckled protein 100 kDa), NUDR (Nuclear DEAF-1 related), GMEB (Glucocorticoid Modulatory Element Binding) proteins and AIRE-1 (Autoimmune regulator 1) proteins. Proteins containing the SAND domain have a modular structure; the SAND domain can be associated with a number of other modules, including the bromodomain, the PHD finger and the MYND finger. Because no SAND domain has been found in yeast, it is thought that the SAND domain could be restricted to animal phyla. Many SAND domain-containing proteins, including NUDR, DEAF-1 (Deformed epidermal autoregulatory factor-1) and GMEB, have been shown to bind DNA sequences specifically. The SAND domain has been proposed to mediate the DNA binding activity of these proteins [, ]. The resolution of the 3D structure of the SAND domain from Sp100b has revealed that it consists of a novel alpha/beta fold. The SAND domain adopts a compact fold consisting of a strongly twisted, five-stranded antiparallel beta-sheet with four alpha-helices packing against one side of the beta-sheet. The opposite side of the beta-sheet is solvent exposed. The beta-sheet and alpha-helical parts of the structure form two distinct regions. Multiple hydrophobic residues pack between these regions to form a structural core. A conserved KDWK sequence motif is found within the alpha-helical, positively charged surface patch. The DNA binding surface has been mapped to the alpha-helical region encompassing the KDWK motif [].; GO: 0003677 DNA binding, 0005634 nucleus; PDB: 1OQJ_B 1UFN_A 1H5P_A.
Probab=89.17 E-value=0.087 Score=48.31 Aligned_cols=55 Identities=27% Similarity=0.470 Sum_probs=39.3
Q ss_pred eeEEEe-----CCeEEeeCcCCCCceeeCcchhhhcccccc-cCccccccccCCccHHHHHHH
Q 002381 255 LRGIIR-----DGGILCSCSLCNGCRVIPPSKFEIHACKQY-RRASQYICFENGKSLLEVLRA 311 (929)
Q Consensus 255 l~G~i~-----~~GilC~C~~C~~~~v~s~s~FE~HAG~~~-~~p~~~I~lenG~sL~~v~~~ 311 (929)
+.|++. ..|+...|-.++ .+-+||.+||.|||..+ |+=-..|.. +|.+|..+|++
T Consensus 18 ~~G~L~~~k~~~~g~~~kCI~~~-g~~~TP~eFE~~~G~~~sK~WK~SIr~-~g~~L~~li~~ 78 (82)
T PF01342_consen 18 VKGTLYKKKFVKQGICGKCIQCE-GRWFTPSEFERHGGKGSSKDWKRSIRC-GGEPLGKLIEK 78 (82)
T ss_dssp EEEEEEHHHH-TTGTTSS-EEET-TEEE-HHHHHHHHTTCTCS-HHHHSEE-TTEEHHHHHHT
T ss_pred eEEEEEHHHhhcccccCceEeeC-CcEECHHHHHhhcCcccCCCCCccEEE-CCEEHHHHHhh
Confidence 356555 445666677777 57999999999999874 445667877 89999988864
No 118
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=88.92 E-value=2.3 Score=44.36 Aligned_cols=82 Identities=17% Similarity=0.110 Sum_probs=63.2
Q ss_pred cceEEEEEeeCCeEEEEEEEEEeC---------------------CeeEEEeeeEeecCccC------CChhHHHHHHHH
Q 002381 795 GGMYCAILTVNSSVVSAGILRVFG---------------------QEVAELPLVATSKINHG------KGYFQLLFACIE 847 (929)
Q Consensus 795 ~GfY~~VL~~~~~vVsaA~lri~g---------------------~~~AElplVAT~~~yRg------qG~gr~L~~~IE 847 (929)
.-.|.+++. +|+++|+++|.... ++++|+=+++++++.++ .-+...|+.++-
T Consensus 44 ~~~ylv~~~-~g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~p~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~ 122 (182)
T PF00765_consen 44 DAVYLVALD-DGRVVGCARLLPTTGPYMLSDVFPHLLPDGPAPRSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMV 122 (182)
T ss_dssp T-EEEEEEE-TTEEEEEEEEEETTS--HHHHCTGGGHTTS---SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHH
T ss_pred CCeEEEEEE-CCEEEEEeeeccCCCcchhhhHHHHHhCCCCCCCCCcceeeeEEEEcccccccccccccHHHHHHHHHHH
Confidence 346777665 59999999987533 57999999999988542 235789999999
Q ss_pred HHhhhcCccEEEecChhhhHHHHHhccCcEE
Q 002381 848 KLLSFLRVKSIVLPAAEEAESIWTDKFGFKK 878 (929)
Q Consensus 848 ~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~~ 878 (929)
+.+.+.|++.++.-+..-.+.++.+ +||..
T Consensus 123 e~a~~~gi~~~v~V~~~~~~r~l~r-~G~~~ 152 (182)
T PF00765_consen 123 EFALSNGIRHIVGVVDPAMERILRR-AGWPV 152 (182)
T ss_dssp HHHHCTT-SEEEEEEEHHHHHHHHH-CT-EE
T ss_pred HHHHHCCCCEEEEEEChHHHHHHHH-cCCce
Confidence 9999999999998888777888887 99874
No 119
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=88.59 E-value=2.7 Score=44.70 Aligned_cols=118 Identities=18% Similarity=0.106 Sum_probs=77.2
Q ss_pred HHHHHHHHhhhhcCCCcccCCCCCCccccccccccCCCcee-cceEEEEEeeCCeEEEEEEEEEe---------------
Q 002381 754 LLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEF-GGMYCAILTVNSSVVSAGILRVF--------------- 817 (929)
Q Consensus 754 s~La~AL~If~EcF~PiiD~rSgrDLIp~MVy~~~~~~~~f-~GfY~~VL~~~~~vVsaA~lri~--------------- 817 (929)
..+.++...=++.|. +. =|=++ +. --|.+....|- .-.|.+....+|++||+++|--.
T Consensus 16 ~~l~~~~rLR~~VF~---~e-lgW~~-~~-~~g~E~D~yD~~~~~yll~~~~~g~vvG~~RLlptt~p~ml~~~fp~l~~ 89 (207)
T PRK13834 16 SLLKQMHRLRARVFG---GR-LGWDV-SI-TDGEERDQFDDLKPTYILAISDSGRVAGCARLLPAIGPTMLAQVFPQLLP 89 (207)
T ss_pred HHHHHHHHHHHHHhc---cc-cCCCC-CC-CCCcCccCCCCCCCEEEEEEeCCCeEEEEEecccCCCcchhhhhcHHhcC
Confidence 345666666666663 11 11222 10 11333333333 34566666678899999987211
Q ss_pred ------CCeeEEEeeeEeecCcc---CCC----hhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCcEE
Q 002381 818 ------GQEVAELPLVATSKINH---GKG----YFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKK 878 (929)
Q Consensus 818 ------g~~~AElplVAT~~~yR---gqG----~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~~ 878 (929)
..+++|+-++|++++++ +.+ +...|+.++-+.+...|+++++.-.......++.+ +||..
T Consensus 90 ~~~~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~~~~~r~l~r-~G~~~ 162 (207)
T PRK13834 90 AGRLNAHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMANGYTEIVTATDLRFERILAR-AGWPM 162 (207)
T ss_pred CCCCCCCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHH-cCCCe
Confidence 25799999999999863 222 55789999999999999999987777766777755 88754
No 120
>PF12861 zf-Apc11: Anaphase-promoting complex subunit 11 RING-H2 finger
Probab=87.69 E-value=0.26 Score=45.61 Aligned_cols=58 Identities=21% Similarity=0.434 Sum_probs=35.7
Q ss_pred CccccccccccccCC--cccccCCCCceEeccCCCcccccccCC--CCCCCCCCcccccccccc
Q 002381 537 LGIICHCCNSEVSPS--QFEAHADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMF 596 (929)
Q Consensus 537 ~~i~C~~C~~~vSpS--~FE~hadgG~Ll~CD~Cp~aFH~~CL~--L~~vP~g~W~Cp~C~~~~ 596 (929)
+++.|.+|...+... .....+|.-.++.+. |.+.||..|+. ++. ....-.||.|+..+
T Consensus 20 ~dd~CgICr~~fdg~Cp~Ck~Pgd~Cplv~g~-C~H~FH~hCI~kWl~~-~~~~~~CPmCR~~w 81 (85)
T PF12861_consen 20 NDDVCGICRMPFDGCCPDCKFPGDDCPLVWGK-CSHNFHMHCILKWLST-QSSKGQCPMCRQPW 81 (85)
T ss_pred CCCceeeEecccccCCCCccCCCCCCceeecc-CccHHHHHHHHHHHcc-ccCCCCCCCcCCee
Confidence 478899999765311 111111222445444 99999999995 332 23346999999754
No 121
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=87.58 E-value=1 Score=46.77 Aligned_cols=68 Identities=16% Similarity=0.151 Sum_probs=53.5
Q ss_pred ceEEEEEeeCCeEEEEEEEEEeCCeeEEEe-----eeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhh
Q 002381 796 GMYCAILTVNSSVVSAGILRVFGQEVAELP-----LVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE 865 (929)
Q Consensus 796 GfY~~VL~~~~~vVsaA~lri~g~~~AElp-----lVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~ 865 (929)
-.|-+|-+ ++++||...+|-.=.+ ..++ --+|+|+-||+||++.++.-..+.++.||++.+.+-+..+
T Consensus 69 ~~y~~v~~-d~~ivG~i~lRh~Ln~-~ll~~gGHIGY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~d 141 (174)
T COG3981 69 STYWAVDE-DGQIVGFINLRHQLND-FLLEEGGHIGYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKD 141 (174)
T ss_pred eeEEEEec-CCcEEEEEEeeeecch-HHHhcCCcccceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 35666545 8999999999864322 1122 2469999999999999999999999999999998887754
No 122
>PF12678 zf-rbx1: RING-H2 zinc finger; InterPro: IPR024766 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This domain constitutes a conserved region found in proteins that participate in diverse functions relevant to chromosome metabolism and cell cycle control [].The domain contains 8 cysteine/ histidine residues which are proposed to be the conserved residues involved in zinc binding.; PDB: 4A0C_D 4A0L_I 4A0K_B 2ECL_A 1LDK_C 3RTR_F 3DQV_Y 1U6G_B 1LDJ_B 2HYE_D ....
Probab=87.35 E-value=0.15 Score=45.53 Aligned_cols=54 Identities=20% Similarity=0.375 Sum_probs=32.9
Q ss_pred ccccccccccccCCcccccCCCC-ceEeccCCCcccccccCCCCCCCCCCccccccc
Q 002381 538 GIICHCCNSEVSPSQFEAHADGG-NLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 593 (929)
Q Consensus 538 ~i~C~~C~~~vSpS~FE~hadgG-~Ll~CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~ 593 (929)
++.|.+|...+.....+..+++. -.+.-..|++.||..|+. .|-.....||.|+
T Consensus 19 ~d~C~IC~~~l~~~~~~~~~~~~~~~i~~~~C~H~FH~~Ci~--~Wl~~~~~CP~CR 73 (73)
T PF12678_consen 19 DDNCAICREPLEDPCPECQAPQDECPIVWGPCGHIFHFHCIS--QWLKQNNTCPLCR 73 (73)
T ss_dssp CSBETTTTSBTTSTTCCHHHCTTTS-EEEETTSEEEEHHHHH--HHHTTSSB-TTSS
T ss_pred CCcccccChhhhChhhhhcCCccccceEecccCCCEEHHHHH--HHHhcCCcCCCCC
Confidence 44599999887433323232332 233335599999999994 4444455899885
No 123
>PF07897 DUF1675: Protein of unknown function (DUF1675); InterPro: IPR012463 The members of this family are sequences derived from hypothetical plant proteins of unknown function. One member of this family (Q9SFV5 from SWISSPROT) is annotated as a putative RNA-binding protein, but no evidence was found to support this.
Probab=86.28 E-value=1.1 Score=50.05 Aligned_cols=68 Identities=16% Similarity=0.246 Sum_probs=44.9
Q ss_pred chhHHhhhcCCCCCceEEEEcCCcccceeeeEEEeCC------eEEeeCcCCCCceeeCcchhhhccccc-ccCccccc
Q 002381 226 MTVTELFETGLLDGVSVVYMGGIKFQASGLRGIIRDG------GILCSCSLCNGCRVIPPSKFEIHACKQ-YRRASQYI 297 (929)
Q Consensus 226 ~~vk~Ll~tglleg~~V~Y~~~~~~~~~~l~G~i~~~------GilC~C~~C~~~~v~s~s~FE~HAG~~-~~~p~~~I 297 (929)
.+...-..+.+++.+|-.+-.+..-++....|+++.- -|+|-|- -.-+||.+|=.|||.. .-||-.||
T Consensus 209 ~~~~~~~~~~~~~~mp~v~t~g~gpng~~i~g~ly~y~~~~~v~i~c~ch----g~~~~~~efv~h~~~~~~~~p~~hi 283 (284)
T PF07897_consen 209 TNSGGDGSRNMMEDMPCVSTTGDGPNGKRIEGFLYKYGKGEEVRIVCVCH----GSFLSPAEFVKHAGGGDVANPLRHI 283 (284)
T ss_pred ccccccccccccccCCceeeccCCCCCceeeEEEEEecCCCeEEEEEEec----CCCCCHHHHHHhcCCCCcCCchhcc
Confidence 3444445555667777555433222344556666544 3888886 4689999999999987 45899998
No 124
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=84.91 E-value=2 Score=40.82 Aligned_cols=48 Identities=21% Similarity=0.234 Sum_probs=41.3
Q ss_pred eeCCeEEEEEEEEEeC--CeeEEEeeeEeecCccCCChhHHHHHHHHHHh
Q 002381 803 TVNSSVVSAGILRVFG--QEVAELPLVATSKINHGKGYFQLLFACIEKLL 850 (929)
Q Consensus 803 ~~~~~vVsaA~lri~g--~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l 850 (929)
+.++...++|.+..-+ .+++-|-.+|+.+..||+|+++.|+.+|-+..
T Consensus 14 y~~e~y~~~aIvt~~~~~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d~ 63 (99)
T cd04264 14 YLSEGYNAAAIVTYEGVNNGVPYLDKFAVSSSAQGEGTSDALWRRLRRDF 63 (99)
T ss_pred EEeCCceEEEEEeccCCCCCceEEEEEEEchhhhhcChHHHHHHHHHhhC
Confidence 5567788888887654 58999999999999999999999999998774
No 125
>PF13639 zf-RING_2: Ring finger domain; PDB: 2KIZ_A 4EPO_C 1IYM_A 2EP4_A 2ECT_A 2JRJ_A 2ECN_A 2ECM_A 3NG2_A 2EA6_A ....
Probab=82.39 E-value=0.14 Score=40.84 Aligned_cols=44 Identities=23% Similarity=0.573 Sum_probs=27.6
Q ss_pred cccccccccccCCcccccCCCCceEeccCCCcccccccCCCCCCCCCCccccccc
Q 002381 539 IICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 593 (929)
Q Consensus 539 i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~ 593 (929)
+.|.+|...+.. +..++... |++.||..|+. .|-.....||.|+
T Consensus 1 d~C~IC~~~~~~--------~~~~~~l~-C~H~fh~~Ci~--~~~~~~~~CP~CR 44 (44)
T PF13639_consen 1 DECPICLEEFED--------GEKVVKLP-CGHVFHRSCIK--EWLKRNNSCPVCR 44 (44)
T ss_dssp -CETTTTCBHHT--------TSCEEEET-TSEEEEHHHHH--HHHHHSSB-TTTH
T ss_pred CCCcCCChhhcC--------CCeEEEcc-CCCeeCHHHHH--HHHHhCCcCCccC
Confidence 358899876542 34455555 99999999994 2222234888885
No 126
>PF14446 Prok-RING_1: Prokaryotic RING finger family 1
Probab=81.07 E-value=1.1 Score=38.33 Aligned_cols=34 Identities=26% Similarity=0.833 Sum_probs=29.7
Q ss_pred CccccccccccccCCcccccCCCCceEeccCCCcccccccCC
Q 002381 537 LGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECAS 578 (929)
Q Consensus 537 ~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~ 578 (929)
.+-.|.+|++.+. ++++++.|..|...||..|..
T Consensus 4 ~~~~C~~Cg~~~~--------~~dDiVvCp~CgapyHR~C~~ 37 (54)
T PF14446_consen 4 EGCKCPVCGKKFK--------DGDDIVVCPECGAPYHRDCWE 37 (54)
T ss_pred cCccChhhCCccc--------CCCCEEECCCCCCcccHHHHh
Confidence 4668999998876 478999999999999999983
No 127
>PF07227 DUF1423: Protein of unknown function (DUF1423); InterPro: IPR004082 A total of 715 potential protein-coding genes have been identified in the nucleotide sequence of Arabidopsis thaliana chromosome 5, with an average gene density of 1 gene per 4001 bp []. Amongst the gene products is a well-conserved family of 130.7kDa proteins that share no sequence similarity with any other known proteins, other than in plants. The sequences are characterised by an N-terminal domain of variable length, a central cysteine-rich region and a relatively acidic C-terminal domain. The sequences may possess a PHD finger.
Probab=79.62 E-value=1.9 Score=50.65 Aligned_cols=56 Identities=21% Similarity=0.581 Sum_probs=36.7
Q ss_pred cccccCCCCCCCCCCCCceeecCCCCCccCCCCCCcCcCC---c-ccC---CCCCcceEcCCCcchh
Q 002381 641 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMA---D-LRE---LPKGKWFCCMDCSRIN 700 (929)
Q Consensus 641 C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p~~~~---~-L~e---lP~g~WfCc~~C~~i~ 700 (929)
|.+|.+.|+.. ++-.||.||.|..|.|++|.=...+. + ... ..+..++| ..|.+..
T Consensus 131 C~iC~kfD~~~---n~~~Wi~Cd~CgH~cH~dCALr~~~i~~G~s~~g~~g~~d~~f~C-~~C~~~s 193 (446)
T PF07227_consen 131 CCICSKFDDNK---NTCSWIGCDVCGHWCHLDCALRHELIGTGPSVKGSIGTLDMQFHC-RACGKTS 193 (446)
T ss_pred ccccCCcccCC---CCeeEEeccCCCceehhhhhcccccccCCccCCCCCccCceEEEc-cCCCChh
Confidence 88898877543 45679999999999999995433321 1 111 11235555 8997643
No 128
>PF02474 NodA: Nodulation protein A (NodA); InterPro: IPR003484 Rhizobial nodulation (Nod) factors are signalling molecules secreted by root-nodulating rhizobia in response to flavanoids excreted by the host plant. They induce various symbiotic responses on the roots of the leguminous host plant at low concentrations, and are required for successful infection. Rhizobial Nod factors are lipo-chitooligosaccharides carrying various substituents which are important determinants of host specificity []. NodA is an N-acyl transferase which specifies the transfer of an acyl chain to the oligosaccharide backbone of Nod factor. Allelic variation of the nodA gene can contribute to the determination of host range [].; GO: 0016746 transferase activity, transferring acyl groups
Probab=79.53 E-value=3 Score=43.53 Aligned_cols=53 Identities=19% Similarity=0.048 Sum_probs=45.4
Q ss_pred eEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccC
Q 002381 821 VAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFG 875 (929)
Q Consensus 821 ~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfG 875 (929)
+||+-+.||+++.+|.|+++.+ ..+--.|+.|||+--|---+......+++ |+
T Consensus 85 VaElGLygVRpDLEGlGi~hs~-r~m~PvLq~LgVPF~FGtVR~al~~Hv~R-~~ 137 (196)
T PF02474_consen 85 VAELGLYGVRPDLEGLGISHSM-RVMYPVLQELGVPFGFGTVRHALRNHVER-LC 137 (196)
T ss_pred EEEEEEEEeeccccccccchhh-hhhhhHHHhcCCCeecccchHHHHHHHHH-Hh
Confidence 8999999999999999999976 58889999999998877777666777766 44
No 129
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=77.38 E-value=6.6 Score=43.95 Aligned_cols=81 Identities=9% Similarity=0.028 Sum_probs=62.9
Q ss_pred EEEEe-eCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhh--hHHHHHhccC
Q 002381 799 CAILT-VNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE--AESIWTDKFG 875 (929)
Q Consensus 799 ~~VL~-~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~--a~~~w~~kfG 875 (929)
.++++ .+|++|+++.+..+++ .+.....++.++|++.+-+-.|+-.+.+.+.+.|++++-+..... -.-.|+++||
T Consensus 197 l~~a~~~~g~~va~~l~~~~~~-~~~~~~~g~~~~~~~~~~~~lL~w~~i~~a~~~G~~~fDfG~s~~~~G~~~FK~~~G 275 (330)
T TIGR03019 197 VLTVRLGDGVVASAVLSFYFRD-EVLPYYAGGLREARDVAANDLMYWELMRRACERGLRVFDFGRSKRGTGPFKFKKNWG 275 (330)
T ss_pred EEEEEeCCCCEEEEEEEEEeCC-EEEEEeccChHHHHhhChHHHHHHHHHHHHHHCCCcEEEcCCCCCCCccHHHHhcCC
Confidence 34446 6899999888766664 445557889999999999999999999999999999999876432 2334667789
Q ss_pred cEEcC
Q 002381 876 FKKID 880 (929)
Q Consensus 876 F~~i~ 880 (929)
|+...
T Consensus 276 ~~~~~ 280 (330)
T TIGR03019 276 FEPQP 280 (330)
T ss_pred Ceecc
Confidence 98654
No 130
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=74.91 E-value=6 Score=37.69 Aligned_cols=48 Identities=19% Similarity=0.165 Sum_probs=37.8
Q ss_pred eeCCeEEEEEEEEEeC-CeeEEEeeeEeecCccCCChhHHHHHHHHHHh
Q 002381 803 TVNSSVVSAGILRVFG-QEVAELPLVATSKINHGKGYFQLLFACIEKLL 850 (929)
Q Consensus 803 ~~~~~vVsaA~lri~g-~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l 850 (929)
+.++..=++|.+..-. .+++-|-.+|+.+..||+|+++.|+.+|-+..
T Consensus 15 y~~e~y~~~aivt~~~~~~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~ 63 (99)
T cd04265 15 YLSEGYNAAAIVTNEEVDGVPYLDKFAVSSSAQGEGTGEALWRRLRRDF 63 (99)
T ss_pred EEeCCCcEEEEEeccCCCCceEEEEEEEchhhhhcChHHHHHHHHHhhC
Confidence 3444455566665433 47999999999999999999999999998874
No 131
>PF11793 FANCL_C: FANCL C-terminal domain; PDB: 3K1L_A.
Probab=74.27 E-value=1.9 Score=38.37 Aligned_cols=53 Identities=23% Similarity=0.387 Sum_probs=19.7
Q ss_pred ccccccccccccCCcccccCCCCceEecc--CCCcccccccCC--C---CC----CCCCCcccccccccc
Q 002381 538 GIICHCCNSEVSPSQFEAHADGGNLLPCD--GCPRAFHKECAS--L---SS----IPQGDWYCKYCQNMF 596 (929)
Q Consensus 538 ~i~C~~C~~~vSpS~FE~hadgG~Ll~CD--~Cp~aFH~~CL~--L---~~----vP~g~W~Cp~C~~~~ 596 (929)
+..|.+|...+.. .+.-..+.|+ .|...||..||. + .. +..-.+.||.|...+
T Consensus 2 ~~~C~IC~~~~~~------~~~~p~~~C~n~~C~~~fH~~CL~~wf~~~~~~~~~~~~~~G~CP~C~~~i 65 (70)
T PF11793_consen 2 ELECGICYSYRLD------DGEIPDVVCPNPSCGKKFHLLCLSEWFLSLEKSRQSFIPIFGECPYCSSPI 65 (70)
T ss_dssp --S-SSS--SS-T------T-----B--S-TT----B-SGGGHHHHHHHHSSS-TTT--EEE-TTT-SEE
T ss_pred CCCCCcCCcEecC------CCCcCceEcCCcccCCHHHHHHHHHHHHHcccCCeeecccccCCcCCCCee
Confidence 3569999864331 1222347898 799999999994 1 11 111246799998754
No 132
>KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription]
Probab=73.01 E-value=4.8 Score=45.94 Aligned_cols=65 Identities=17% Similarity=0.290 Sum_probs=45.7
Q ss_pred EEEEeCCeeEEEeeeEeec-CccCCChhHHHHHHHHHHhhhc-CccEEEecChhhhHHHHHhccCcEEcCH
Q 002381 813 ILRVFGQEVAELPLVATSK-INHGKGYFQLLFACIEKLLSFL-RVKSIVLPAAEEAESIWTDKFGFKKIDP 881 (929)
Q Consensus 813 ~lri~g~~~AElplVAT~~-~yRgqG~gr~L~~~IE~~l~~l-gV~~LvLpA~~~a~~~w~~kfGF~~i~~ 881 (929)
-|||+|.- +|.-+-++ .||.||||.+||+..|+.+++- |-..+-+-+-......|.+ |||..-++
T Consensus 481 ELHVYGs~---vpv~~rDp~KfQHQG~GtLLmeEAERIAr~EHgS~KiavISGVGtR~YY~k-lGY~LdGP 547 (554)
T KOG2535|consen 481 ELHVYGSV---VPVHSRDPTKFQHQGFGTLLMEEAERIAREEHGSGKIAVISGVGTRNYYRK-LGYELDGP 547 (554)
T ss_pred eeeeccee---eecccCCchhhhhcchhhHHHHHHHHHHHHhcCCCceEEEeccchHHHHHh-hCeeecCh
Confidence 35666642 33333333 4999999999999999999864 4556666666666777777 99987665
No 133
>KOG1473 consensus Nucleosome remodeling factor, subunit NURF301/BPTF [Chromatin structure and dynamics; Transcription]
Probab=72.91 E-value=1.9 Score=55.11 Aligned_cols=45 Identities=27% Similarity=0.742 Sum_probs=39.1
Q ss_pred CccccccCCCCCCCCCCCCceeecCCCCCccCCCCCCcCcCCcccCCCCCcceEcCCCc
Q 002381 639 SGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS 697 (929)
Q Consensus 639 ~~C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p~~~~~L~elP~g~WfCc~~C~ 697 (929)
.+|.+|.+ .+.++.|..|++.||..|+.+ ++.+.|...|-| ..|.
T Consensus 345 dhcrf~~d---------~~~~lc~Et~prvvhlEcv~h----P~~~~~s~~~e~-evc~ 389 (1414)
T KOG1473|consen 345 DHCRFCHD---------LGDLLCCETCPRVVHLECVFH----PRFAVPSAFWEC-EVCN 389 (1414)
T ss_pred ccccccCc---------ccceeecccCCceEEeeecCC----ccccCCCccchh-hhhh
Confidence 46999984 468999999999999999987 788999999999 7774
No 134
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=67.34 E-value=45 Score=34.70 Aligned_cols=111 Identities=13% Similarity=0.186 Sum_probs=71.8
Q ss_pred cCcceeEccCCCCChhhHHHHHHHHHhhhhcCCCcccCCCCCCccccccccccC-----CCceecceEEEEEee--CCeE
Q 002381 736 IDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNL-----RGQEFGGMYCAILTV--NSSV 808 (929)
Q Consensus 736 ~dikW~LLsgk~~s~e~~s~La~AL~If~EcF~PiiD~rSgrDLIp~MVy~~~~-----~~~~f~GfY~~VL~~--~~~v 808 (929)
.+|.|..+. ..+...|.+.-..+.|-+.--- |-.-..-|+.+| .--+|.-.|.+.+.. ++++
T Consensus 22 ~gF~W~~~d-----l~d~~~l~ely~lL~~nYVEDd------d~~fRf~YS~efL~WaL~pPg~~~~whiGVR~~~~~kL 90 (162)
T PF01233_consen 22 DGFEWSTLD-----LNDDEELKELYELLNENYVEDD------DNMFRFDYSKEFLKWALKPPGWKKEWHIGVRVKSSKKL 90 (162)
T ss_dssp TTEEEEE-------TTSHHHHHHHHHHHHHHSSBTT------TSSEEE---HHHHHHHHTSTT--GGGEEEEEETTTTEE
T ss_pred CCCEEEecC-----CCCHHHHHHHHHHHHhcCccCC------cceEEeeCCHHHHhheeeCcCCccceEEEEEECCCCEE
Confidence 368998763 3345667788888888883321 222224455543 233444445555554 5777
Q ss_pred EEE-----EEEEEeCC--eeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccE
Q 002381 809 VSA-----GILRVFGQ--EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKS 857 (929)
Q Consensus 809 Vsa-----A~lri~g~--~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~ 857 (929)
||- +.+||.+. ..+||=++.+++.+|.+++.=.|+.+|=+.+...||-.
T Consensus 91 vgfIsaip~~irv~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~~gI~q 146 (162)
T PF01233_consen 91 VGFISAIPATIRVRDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNLQGIWQ 146 (162)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT--E
T ss_pred EEEEccceEEEEEeeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhhcCcee
Confidence 773 56888775 79999999999999999999999999999988888754
No 135
>KOG2752 consensus Uncharacterized conserved protein, contains N-recognin-type Zn-finger [General function prediction only]
Probab=66.36 E-value=5.5 Score=44.91 Aligned_cols=121 Identities=18% Similarity=0.349 Sum_probs=64.6
Q ss_pred cccccccCCcc-ccccccccccCCcccccCCCCceEeccCCCcccccccCCCCCCCCCCccccccccccccccccccccc
Q 002381 529 LLEGYKNGLGI-ICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMFERKRFLQHDAN 607 (929)
Q Consensus 529 ll~G~~~~~~i-~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~~~~~rek~v~~n~n 607 (929)
...|++.+.-. .|--|.- +++....|-.|--.+|-.-..+..+-.+.+.|--|..++.+... +.
T Consensus 45 y~~Gy~~rQ~l~sClTC~P-----------~~~~agvC~~C~~~CH~~H~lveL~tKR~FrCDCg~sk~g~~sc---~l- 109 (345)
T KOG2752|consen 45 YAKGYKKRQALFSCLTCTP-----------APEMAGVCYACSLSCHDGHELVELYTKRNFRCDCGNSKFGRCSC---NL- 109 (345)
T ss_pred cccCcccccceeEeecccC-----------ChhhceeEEEeeeeecCCceeeeccccCCccccccccccccccc---cc-
Confidence 34567664433 3666763 45577788888877776655555566678888877665543211 00
Q ss_pred cccccccccccchhcccchhhhccccccccCCccccccCCCCCCCCCCCCceeecCCCCCccC-CCCCCcC
Q 002381 608 AVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFH-VGCLKKH 677 (929)
Q Consensus 608 ~~a~gr~~Gvd~ieqi~krciR~~kd~e~e~~~C~iC~~~dfs~sg~~~~~LL~CDqCdraYH-v~CL~p~ 677 (929)
...+..+++.+. +. . ..+-.+|. |........-..++.|++|--|+-||| .+|++..
T Consensus 110 -~~~~~~~n~~N~--YN----h-----NfqG~~C~-Cd~~Ypdp~~~~e~~m~QC~iCEDWFHce~c~~~~ 167 (345)
T KOG2752|consen 110 -LEDKDAENSENL--YN----H-----NFQGLFCK-CDTPYPDPVRTEEGEMLQCVICEDWFHCEGCMQAK 167 (345)
T ss_pred -ccccccccchhh--hh----h-----hhcceeEE-ecCCCCCccccccceeeeEEeccchhcccccCccc
Confidence 000000100000 00 0 00112243 444322211224678999999999999 9998764
No 136
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=65.87 E-value=18 Score=36.57 Aligned_cols=59 Identities=14% Similarity=0.252 Sum_probs=45.7
Q ss_pred eeEeecCccCCChhHHHHHHHHHHhhhcCccEEEec----ChhhhHHHHHhccCcEEcCHHHH
Q 002381 826 LVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLP----AAEEAESIWTDKFGFKKIDPELL 884 (929)
Q Consensus 826 lVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLp----A~~~a~~~w~~kfGF~~i~~~~l 884 (929)
+|.|-..-||.|.+|+|...+-..+..-|-.+|++- --.+|...+...|||+.+++.++
T Consensus 89 RvVVA~~aRGrG~aRalY~Dlf~~Ae~agy~~~tCEVn~DppnpasdaFHaalGF~eVG~a~i 151 (167)
T COG3818 89 RVVVASRARGRGVARALYADLFSYAELAGYPYLTCEVNLDPPNPASDAFHAALGFHEVGQATI 151 (167)
T ss_pred EEEEEecccccchHHHHHHHHHHHHHhcCCceEEEEecCCCCChHHHHHhhhcCceEccceEE
Confidence 334444569999999999999999999999988763 22345666777799999998653
No 137
>PF15446 zf-PHD-like: PHD/FYVE-zinc-finger like domain
Probab=65.65 E-value=3.4 Score=42.86 Aligned_cols=35 Identities=20% Similarity=0.555 Sum_probs=26.7
Q ss_pred cccccCCCCCCCCCCCCceeecCCCCCccCCCCCCcCc
Q 002381 641 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHK 678 (929)
Q Consensus 641 C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p~~ 678 (929)
|..|+..+ .+...+.||.|..|-.+||..||.+..
T Consensus 2 C~~C~~~g---~~~~kG~Lv~CQGCs~sYHk~CLG~Rs 36 (175)
T PF15446_consen 2 CDTCGYEG---DDRNKGPLVYCQGCSSSYHKACLGPRS 36 (175)
T ss_pred cccccCCC---CCccCCCeEEcCccChHHHhhhcCCcc
Confidence 77886432 122467899999999999999998753
No 138
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=64.88 E-value=18 Score=38.40 Aligned_cols=84 Identities=15% Similarity=0.096 Sum_probs=47.1
Q ss_pred HHHHHHHHHhhhhcCCCcccCCCCCCccccccccccCCCceecc--eEEEEEeeCCe--EEEEEEEEEeCCeeEEEeeeE
Q 002381 753 RLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGG--MYCAILTVNSS--VVSAGILRVFGQEVAELPLVA 828 (929)
Q Consensus 753 ~s~La~AL~If~EcF~PiiD~rSgrDLIp~MVy~~~~~~~~f~G--fY~~VL~~~~~--vVsaA~lri~g~~~AElplVA 828 (929)
+....+-|-.|-..| +|++|=- .|... ||++.-..++. +||-=+=--...+--.|--|-
T Consensus 25 ~~~yCqnLcLlaKLF---Ld~Ktly--------------ydv~~F~FYVl~e~d~~g~h~vGyFSKEk~s~~~~NLsCIl 87 (188)
T PF01853_consen 25 HKLYCQNLCLLAKLF---LDHKTLY--------------YDVDPFLFYVLTEKDDDGFHIVGYFSKEKESWDNNNLSCIL 87 (188)
T ss_dssp SHHHHHHHHHHHHTT----SSGCCT--------------T-STTEEEEEEEEEETTEEEEEEEEEEESS-TT-EEESEEE
T ss_pred CchHHHHHHHHHHHH---hhCeEEE--------------eecCceEEEEEEEecCccceeEEEEEEEecccCCeeEeehh
Confidence 356688899999999 3443311 12233 45444333332 232222111112334777899
Q ss_pred eecCccCCChhHHHHHHHHHHhhhc
Q 002381 829 TSKINHGKGYFQLLFACIEKLLSFL 853 (929)
Q Consensus 829 T~~~yRgqG~gr~L~~~IE~~l~~l 853 (929)
|.|.||++|||+.|++.==.+.+.-
T Consensus 88 ~lP~yQrkGyG~~LI~fSY~LSr~e 112 (188)
T PF01853_consen 88 TLPPYQRKGYGRFLIDFSYELSRRE 112 (188)
T ss_dssp E-GGGTTSSHHHHHHHHHHHHHHHT
T ss_pred hcchhhhcchhhhhhhhHHHHhhcc
Confidence 9999999999999998755554443
No 139
>PF14446 Prok-RING_1: Prokaryotic RING finger family 1
Probab=63.78 E-value=4.7 Score=34.61 Aligned_cols=35 Identities=23% Similarity=0.564 Sum_probs=27.7
Q ss_pred CccccccCCCCCCCCCCCCceeecCCCCCccCCCCCCcCc
Q 002381 639 SGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHK 678 (929)
Q Consensus 639 ~~C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p~~ 678 (929)
..|.+|++.- .+.+.++.|..|...||-.|....+
T Consensus 6 ~~C~~Cg~~~-----~~~dDiVvCp~CgapyHR~C~~~~g 40 (54)
T PF14446_consen 6 CKCPVCGKKF-----KDGDDIVVCPECGAPYHRDCWEKAG 40 (54)
T ss_pred ccChhhCCcc-----cCCCCEEECCCCCCcccHHHHhhCC
Confidence 4599999752 1367899999999999999986543
No 140
>PF13832 zf-HC5HC2H_2: PHD-zinc-finger like domain
Probab=63.14 E-value=3 Score=39.47 Aligned_cols=32 Identities=25% Similarity=0.679 Sum_probs=26.8
Q ss_pred CccccccCCCCCCCCCCCCceeecCC--CCCccCCCCCCcCc
Q 002381 639 SGCLLCRGCDFSKSGFGPRTILLCDQ--CEREFHVGCLKKHK 678 (929)
Q Consensus 639 ~~C~iC~~~dfs~sg~~~~~LL~CDq--CdraYHv~CL~p~~ 678 (929)
..|.+|+.. .+..+.|.. |.++||+.|....+
T Consensus 56 ~~C~iC~~~--------~G~~i~C~~~~C~~~fH~~CA~~~g 89 (110)
T PF13832_consen 56 LKCSICGKS--------GGACIKCSHPGCSTAFHPTCARKAG 89 (110)
T ss_pred CcCcCCCCC--------CceeEEcCCCCCCcCCCHHHHHHCC
Confidence 459999974 467999998 99999999987654
No 141
>KOG4628 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=62.30 E-value=5.3 Score=45.83 Aligned_cols=48 Identities=23% Similarity=0.556 Sum_probs=32.5
Q ss_pred ccccccccccccCCcccccCCCCceEeccCCCcccccccCC--CCCCCCCCccccccccccc
Q 002381 538 GIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFE 597 (929)
Q Consensus 538 ~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~--L~~vP~g~W~Cp~C~~~~~ 597 (929)
.+.|.+|.+.+. .|+.+-==-|.+.||..|++ |.++ .=+||-|++.+.
T Consensus 229 ~~~CaIClEdY~---------~GdklRiLPC~H~FH~~CIDpWL~~~---r~~CPvCK~di~ 278 (348)
T KOG4628|consen 229 TDTCAICLEDYE---------KGDKLRILPCSHKFHVNCIDPWLTQT---RTFCPVCKRDIR 278 (348)
T ss_pred CceEEEeecccc---------cCCeeeEecCCCchhhccchhhHhhc---CccCCCCCCcCC
Confidence 368999997543 33333335577899999997 3322 347999997543
No 142
>KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism]
Probab=61.80 E-value=18 Score=37.27 Aligned_cols=58 Identities=12% Similarity=0.202 Sum_probs=39.3
Q ss_pred eEEEeeeEeecCccCCChhHHHHHHHHHHhhh-cCccEEEecC--hhh-hHHHHHhccCcEEc
Q 002381 821 VAELPLVATSKINHGKGYFQLLFACIEKLLSF-LRVKSIVLPA--AEE-AESIWTDKFGFKKI 879 (929)
Q Consensus 821 ~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~-lgV~~LvLpA--~~~-a~~~w~~kfGF~~i 879 (929)
++|+-+.---|..||+|||+..|.++...+.+ +++.....-. +.. ...++.+ |+|.-+
T Consensus 107 ~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~lFkk-~~f~q~ 168 (185)
T KOG4135|consen 107 TGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRLFKK-FLFTQV 168 (185)
T ss_pred eeeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHHHHH-hhheee
Confidence 45666666779999999999999988887654 4555554443 222 3344444 999854
No 143
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=60.43 E-value=13 Score=41.72 Aligned_cols=33 Identities=21% Similarity=0.136 Sum_probs=25.7
Q ss_pred EEEeeeEeecCccCCChhHHHHHHHHHHhhhcC
Q 002381 822 AELPLVATSKINHGKGYFQLLFACIEKLLSFLR 854 (929)
Q Consensus 822 AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lg 854 (929)
-.|--|-|.|.||++|||+.|++.-=++.+.-|
T Consensus 156 nNLaCIltLPpyQrkGyG~~LI~fSYeLSr~Eg 188 (290)
T PLN03238 156 YNLACILTLPPYQRKGYGKFLISFAYELSKREG 188 (290)
T ss_pred CcEEEEEecChhhhccHhHhHHHHHhHHhhccC
Confidence 457788999999999999999986555544433
No 144
>PF13771 zf-HC5HC2H: PHD-like zinc-binding domain
Probab=60.22 E-value=3.3 Score=37.59 Aligned_cols=32 Identities=31% Similarity=0.766 Sum_probs=25.9
Q ss_pred CccccccCCCCCCCCCCCCceeecCC--CCCccCCCCCCcCc
Q 002381 639 SGCLLCRGCDFSKSGFGPRTILLCDQ--CEREFHVGCLKKHK 678 (929)
Q Consensus 639 ~~C~iC~~~dfs~sg~~~~~LL~CDq--CdraYHv~CL~p~~ 678 (929)
..|.+|+.. .+..|.|.. |.+.||+.|....+
T Consensus 37 ~~C~~C~~~--------~Ga~i~C~~~~C~~~fH~~CA~~~~ 70 (90)
T PF13771_consen 37 LKCSICKKK--------GGACIGCSHPGCSRSFHVPCARKAG 70 (90)
T ss_pred CCCcCCCCC--------CCeEEEEeCCCCCcEEChHHHccCC
Confidence 359999963 257899985 99999999987754
No 145
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=57.72 E-value=43 Score=33.41 Aligned_cols=63 Identities=6% Similarity=0.043 Sum_probs=51.1
Q ss_pred ceEEEEEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEE
Q 002381 796 GMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIV 859 (929)
Q Consensus 796 GfY~~VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~Lv 859 (929)
|-+.+-...+|++|++|.+.+..+.+.-|-.+= +|++...++|...+..-.+.++++|.+.+-
T Consensus 38 ~t~~~~~~~~~kLiav~v~D~l~~glSaVY~fy-DPd~~~~SlG~~~iL~eI~~a~~~~l~y~Y 100 (128)
T PF04377_consen 38 GTYHLEYRLDGKLIAVAVVDILPDGLSAVYTFY-DPDYSKRSLGTYSILREIELARELGLPYYY 100 (128)
T ss_pred CCEEEEEEeCCeEEEEEEeecccchhhheeeee-CCCccccCcHHHHHHHHHHHHHHcCCCEEe
Confidence 334444568999999999988777655554443 899999999999999999999999999998
No 146
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=57.52 E-value=29 Score=40.12 Aligned_cols=127 Identities=16% Similarity=0.245 Sum_probs=86.5
Q ss_pred CcceeEccCCCCChhhHHHHHHHHHhhhhcCCCcccCCCCCCcccccccccc-----CCCceecceEEEEEeeC--CeEE
Q 002381 737 DVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRN-----LRGQEFGGMYCAILTVN--SSVV 809 (929)
Q Consensus 737 dikW~LLsgk~~s~e~~s~La~AL~If~EcF~PiiD~rSgrDLIp~MVy~~~-----~~~~~f~GfY~~VL~~~--~~vV 809 (929)
.+.|..+- -.+...|.+-.+.+.|-+.--. |.....-|..+ +..-++.--|++.+... +++|
T Consensus 80 gf~W~tld-----v~~~~~l~el~~lL~enyVEd~------~~m~rf~Ys~eFl~Wal~~pg~~~~WHiGVRv~~s~kLV 148 (421)
T KOG2779|consen 80 GFRWETLD-----VSDFKDLEELYNLLNENYVEDD------DSMFRFDYSPEFLKWALQPPGWKKEWHIGVRVKSSKKLV 148 (421)
T ss_pred CceeeccC-----CccHhHHHHHHhhcccCCCCcc------ccchhhhccHHHHHhhhcCCCCccceEEEEEEecCCceE
Confidence 58888653 2234456777777778763322 22333334333 33445555677776754 3666
Q ss_pred EE-----EEEEEeCC--eeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCcc------EEEecChhhhHHHHHhcc
Q 002381 810 SA-----GILRVFGQ--EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVK------SIVLPAAEEAESIWTDKF 874 (929)
Q Consensus 810 sa-----A~lri~g~--~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~------~LvLpA~~~a~~~w~~kf 874 (929)
+- ++|||.+. ..+||-++.+++..|++++.=.|+.+|-+...--||- -++||+-...-.-|.+.+
T Consensus 149 aFIsaiP~~irvrdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRRvnl~gIfqA~yTaGvvLp~PVstcRY~HRsL 226 (421)
T KOG2779|consen 149 AFISAIPATIRVRDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRRVNLEGIFQAAYTAGVVLPKPVSTCRYWHRSL 226 (421)
T ss_pred EEEeccccEEEEccceeeeeeEEEEEEehhhhccccccHHHHHHHHHhhhhhhhhHhhhcceeeccccchhhhhhccC
Confidence 63 57888886 6899999999999999999999999998876665554 477888777777787754
No 147
>PRK00756 acyltransferase NodA; Provisional
Probab=57.41 E-value=17 Score=37.88 Aligned_cols=40 Identities=25% Similarity=0.121 Sum_probs=35.0
Q ss_pred eeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEe
Q 002381 820 EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVL 860 (929)
Q Consensus 820 ~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvL 860 (929)
=+||+.+.||+++..|.|++..+ ..+--.|++|||+--|-
T Consensus 84 LVaElGLygVRpDLEGlGi~~S~-r~m~PvLq~LgVPF~FG 123 (196)
T PRK00756 84 LVAELGLYGVRPDLEGLGIAHSI-RAMYPVLQELGVPFAFG 123 (196)
T ss_pred eEEEeeeeeeccccccccchhhH-HHHHHHHHhcCCCeecc
Confidence 38999999999999999999877 68888999999985543
No 148
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=55.72 E-value=36 Score=34.02 Aligned_cols=74 Identities=11% Similarity=0.085 Sum_probs=52.5
Q ss_pred EEEEeeCCeEEEEEEEE--EeC-----CeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHH
Q 002381 799 CAILTVNSSVVSAGILR--VFG-----QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWT 871 (929)
Q Consensus 799 ~~VL~~~~~vVsaA~lr--i~g-----~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~ 871 (929)
.++...+|.+||-+.+- ++- -.++|+ -+...|||+||||+..++|-.+...+ -+-.+++--..|..||+
T Consensus 39 ~~~~~~~~~~igf~l~L~~~~~~~~iD~~~~ef---FIi~k~~~~GvGR~aaK~If~~~~g~-w~Va~i~EN~PA~~fwK 114 (143)
T COG5628 39 AWLFRIGGLPVGFALVLDLAHSPTPIDRAVAEF---FIVRKHRRRGVGRAAAKAIFGSAWGV-WQVATVRENTPARAFWK 114 (143)
T ss_pred eeEEEECCceeeeeeeecccCCCCcccccchhe---EeeehhhccchhHHHHHHHHHHhhce-EEEEEeccCChhHHHHH
Confidence 44556789999988753 211 134444 34557999999999999998875432 34567888889999999
Q ss_pred hccCcE
Q 002381 872 DKFGFK 877 (929)
Q Consensus 872 ~kfGF~ 877 (929)
+ +-+.
T Consensus 115 ~-~~~t 119 (143)
T COG5628 115 R-VAET 119 (143)
T ss_pred h-hhcc
Confidence 9 5443
No 149
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=54.77 E-value=9.4 Score=34.38 Aligned_cols=27 Identities=15% Similarity=0.146 Sum_probs=23.4
Q ss_pred EeeeEeecCccCCChhHHHHHHHHHHh
Q 002381 824 LPLVATSKINHGKGYFQLLFACIEKLL 850 (929)
Q Consensus 824 lplVAT~~~yRgqG~gr~L~~~IE~~l 850 (929)
|.+|=|.+.+||+|+.++||+++-+..
T Consensus 8 I~RIWV~~~~RR~GIAt~Lld~ar~~~ 34 (70)
T PF13880_consen 8 ISRIWVSPSHRRKGIATRLLDAARENF 34 (70)
T ss_pred eEEEEeChhhhhhhHHHHHHHHHHHhc
Confidence 667778999999999999999887753
No 150
>PTZ00064 histone acetyltransferase; Provisional
Probab=51.16 E-value=18 Score=43.34 Aligned_cols=82 Identities=17% Similarity=0.075 Sum_probs=46.8
Q ss_pred HHHHHHHHhhhhcCCCcccCCCCCCccccccccccCCCceecceEEEEEee-C---CeEEEEEEEEEeCCeeEEEeeeEe
Q 002381 754 LLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTV-N---SSVVSAGILRVFGQEVAELPLVAT 829 (929)
Q Consensus 754 s~La~AL~If~EcF~PiiD~rSgrDLIp~MVy~~~~~~~~f~GfY~~VL~~-~---~~vVsaA~lri~g~~~AElplVAT 829 (929)
....+-|-.|-..| +|++|=- .|...|.-+||.. | -.+||-=+=-..-.+--.|--|-|
T Consensus 330 klYCQNLCLLAKLF---LDhKTLY--------------yDVdpFlFYVLtE~D~~G~HiVGYFSKEK~S~~~nNLACILt 392 (552)
T PTZ00064 330 RGYAENLCYLAKLF---LDHKTLQ--------------YDVEPFLFYIVTEVDEEGCHIVGYFSKEKVSLLHYNLACILT 392 (552)
T ss_pred hhHHHHHHHHHHHh---ccCcccc--------------ccccceEEEEEEEecCCCcEEEEEecccccCcccCceEEEEe
Confidence 45577777788888 3443311 1334455555543 2 233332211111112235778899
Q ss_pred ecCccCCChhHHHHHHHHHHhhh
Q 002381 830 SKINHGKGYFQLLFACIEKLLSF 852 (929)
Q Consensus 830 ~~~yRgqG~gr~L~~~IE~~l~~ 852 (929)
.|.||++|||+.|++.==.+.+.
T Consensus 393 LPpyQRKGYGklLIdfSYeLSrr 415 (552)
T PTZ00064 393 LPCYQRKGYGKLLVDLSYKLSLK 415 (552)
T ss_pred cchhhhcchhhhhhhhhhhhhhh
Confidence 99999999999999865444333
No 151
>PLN03239 histone acetyltransferase; Provisional
Probab=50.29 E-value=22 Score=40.92 Aligned_cols=30 Identities=27% Similarity=0.259 Sum_probs=24.1
Q ss_pred EEeeeEeecCccCCChhHHHHHHHHHHhhh
Q 002381 823 ELPLVATSKINHGKGYFQLLFACIEKLLSF 852 (929)
Q Consensus 823 ElplVAT~~~yRgqG~gr~L~~~IE~~l~~ 852 (929)
.|--|-|.|.||++|||+.|++.==++.+.
T Consensus 215 NLaCIltLPpyQrkGyG~lLI~fSYeLSr~ 244 (351)
T PLN03239 215 NLACILTFPAHQRKGYGRFLIAFSYELSKK 244 (351)
T ss_pred ceEEEEecChhhhcchhhhhHhhhhHhhhh
Confidence 577889999999999999999865444433
No 152
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=49.97 E-value=33 Score=32.03 Aligned_cols=25 Identities=20% Similarity=0.292 Sum_probs=21.3
Q ss_pred CeeEEEeeeEeecCccCCChhHHHH
Q 002381 819 QEVAELPLVATSKINHGKGYFQLLF 843 (929)
Q Consensus 819 ~~~AElplVAT~~~yRgqG~gr~L~ 843 (929)
..++||-++||+++||+...-..|.
T Consensus 76 ~~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 76 RRVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred CcEEEeehheECHhHCCChHHHHHh
Confidence 3689999999999999988777664
No 153
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=49.56 E-value=20 Score=43.82 Aligned_cols=30 Identities=27% Similarity=0.529 Sum_probs=21.0
Q ss_pred CccccccCCCCCCCCCCCCceeecCCCCCccCCCCCCc
Q 002381 639 SGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKK 676 (929)
Q Consensus 639 ~~C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p 676 (929)
+.|..|+..+ . ++ =+||.|.+.|+..+|..
T Consensus 143 g~cp~cg~~~---a--rG---D~Ce~Cg~~~~P~~l~~ 172 (558)
T COG0143 143 GTCPKCGGED---A--RG---DQCENCGRTLDPTELIN 172 (558)
T ss_pred ccCCCcCccc---c--Cc---chhhhccCcCCchhcCC
Confidence 4588888432 1 11 27999999999999743
No 154
>KOG1734 consensus Predicted RING-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=48.72 E-value=4.6 Score=44.70 Aligned_cols=56 Identities=21% Similarity=0.431 Sum_probs=34.1
Q ss_pred CCccccccccccccCCcccccCCCCceE---eccCCCcccccccCCCCCCCCCCcccccccccc
Q 002381 536 GLGIICHCCNSEVSPSQFEAHADGGNLL---PCDGCPRAFHKECASLSSIPQGDWYCKYCQNMF 596 (929)
Q Consensus 536 ~~~i~C~~C~~~vSpS~FE~hadgG~Ll---~CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~~~~ 596 (929)
.++.+|.+|++.+..+. |.+-++ .=-.|.+.||..|+.---+--..-.||.|+.++
T Consensus 222 l~d~vCaVCg~~~~~s~-----~eegvienty~LsCnHvFHEfCIrGWcivGKkqtCPYCKekV 280 (328)
T KOG1734|consen 222 LSDSVCAVCGQQIDVSV-----DEEGVIENTYKLSCNHVFHEFCIRGWCIVGKKQTCPYCKEKV 280 (328)
T ss_pred CCcchhHhhcchheeec-----chhhhhhhheeeecccchHHHhhhhheeecCCCCCchHHHHh
Confidence 36778999998765443 222111 112489999999994111112246899998654
No 155
>PF12261 T_hemolysin: Thermostable hemolysin; InterPro: IPR022050 This family of proteins is found in bacteria. Proteins in this family are typically between 200 and 228 amino acids in length. T_hemolysin is a pore-forming toxin of bacteria, able to lyse erythrocytes from a number of mammalian species.
Probab=48.38 E-value=32 Score=36.21 Aligned_cols=55 Identities=22% Similarity=0.393 Sum_probs=47.2
Q ss_pred eeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCcEEc
Q 002381 820 EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKI 879 (929)
Q Consensus 820 ~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~~i 879 (929)
.++||.=+|.. +.|.++.|+..+-..|...|.+.++.-|.........+ +|+...
T Consensus 86 ~IvEvGnLAs~----~~g~~~~l~~~l~~~L~~~g~~w~vfTaT~~lr~~~~r-lgl~~~ 140 (179)
T PF12261_consen 86 QIVEVGNLASF----SPGAARLLFAALAQLLAQQGFEWVVFTATRQLRNLFRR-LGLPPT 140 (179)
T ss_pred heeEeechhhc----CcccHHHHHHHHHHHHHHCCCCEEEEeCCHHHHHHHHH-cCCCce
Confidence 46777766655 58999999999999999999999999999999999888 887543
No 156
>KOG2747 consensus Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=47.51 E-value=20 Score=41.90 Aligned_cols=75 Identities=21% Similarity=0.199 Sum_probs=45.4
Q ss_pred HHHHHHHHHhhhhcCCCcccCCCCCCccccccccccCCCceecceEEEEEeeCCeEEEEEEEEEeCC---eeEEEeeeEe
Q 002381 753 RLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQ---EVAELPLVAT 829 (929)
Q Consensus 753 ~s~La~AL~If~EcF~PiiD~rSgrDLIp~MVy~~~~~~~~f~GfY~~VL~~~~~vVsaA~lri~g~---~~AElplVAT 829 (929)
+....+-|=.|-..| +|++| +| .|...|.-+||...|..= ++-++--.. +--.|--|=|
T Consensus 207 ~k~YCQnLCLlaKLF---LdhKT--------LY------yDvdpFlFYVlte~d~~G-~VGYFSKEK~s~~~yNlaCILt 268 (396)
T KOG2747|consen 207 QKLYCQNLCLLAKLF---LDHKT--------LY------YDVDPFLFYVLTECDSYG-CVGYFSKEKESSENYNLACILT 268 (396)
T ss_pred hhHHHHHHHHHHHHH---hcCce--------eE------EeccceEEEEEEecCCcc-eeeeeccccccccccceeeeee
Confidence 355677777888888 34322 22 244556666666543322 222222122 2333778889
Q ss_pred ecCccCCChhHHHHHH
Q 002381 830 SKINHGKGYFQLLFAC 845 (929)
Q Consensus 830 ~~~yRgqG~gr~L~~~ 845 (929)
.|.||++|||+.|++.
T Consensus 269 LPpyQRkGYGklLIdF 284 (396)
T KOG2747|consen 269 LPPYQRKGYGKLLIDF 284 (396)
T ss_pred cChhhhcccchhhhhh
Confidence 9999999999999874
No 157
>PHA02929 N1R/p28-like protein; Provisional
Probab=47.42 E-value=7.8 Score=42.41 Aligned_cols=54 Identities=19% Similarity=0.340 Sum_probs=33.1
Q ss_pred CccccccccccccCCcccccCCCCceEeccCCCcccccccCCCCCCCCCCcccccccccc
Q 002381 537 LGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMF 596 (929)
Q Consensus 537 ~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~~~~ 596 (929)
.+..|.+|...+.... ........-..|.+.||..|+. .|-...-.||.|+..+
T Consensus 173 ~~~eC~ICle~~~~~~----~~~~~~~vl~~C~H~FC~~CI~--~Wl~~~~tCPlCR~~~ 226 (238)
T PHA02929 173 KDKECAICMEKVYDKE----IKNMYFGILSNCNHVFCIECID--IWKKEKNTCPVCRTPF 226 (238)
T ss_pred CCCCCccCCcccccCc----cccccceecCCCCCcccHHHHH--HHHhcCCCCCCCCCEe
Confidence 4678999997543210 0001122234688999999994 3333455899999754
No 158
>cd00162 RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in mediating protein-protein interactions; identified in a proteins with a wide range of functions such as viral replication, signal transduction, and development; has two variants, the C3HC4-type and a C3H2C3-type (RING-H2 finger), which have different cysteine/histidine pattern; a subset of RINGs are associated with B-Boxes (C-X2-H-X7-C-X7-C-X2-C-H-X2-H)
Probab=46.67 E-value=6.2 Score=29.95 Aligned_cols=40 Identities=28% Similarity=0.625 Sum_probs=26.5
Q ss_pred cccccccccCCcccccCCCCceEeccCCCcccccccCC--CCCCCCCCcccccccc
Q 002381 541 CHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQN 594 (929)
Q Consensus 541 C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~--L~~vP~g~W~Cp~C~~ 594 (929)
|.+|...+ .+.+....|++.||..|+. +.. +...||.|+.
T Consensus 2 C~iC~~~~-----------~~~~~~~~C~H~~c~~C~~~~~~~---~~~~Cp~C~~ 43 (45)
T cd00162 2 CPICLEEF-----------REPVVLLPCGHVFCRSCIDKWLKS---GKNTCPLCRT 43 (45)
T ss_pred CCcCchhh-----------hCceEecCCCChhcHHHHHHHHHh---CcCCCCCCCC
Confidence 77787532 2334445689999999995 221 4677999874
No 159
>PF14569 zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A.
Probab=46.65 E-value=3.9 Score=37.47 Aligned_cols=58 Identities=24% Similarity=0.629 Sum_probs=25.7
Q ss_pred cCCccccccccccccCCcccccCCCCceEeccCCCcccccccCCCCCCCCCCcccccccccccc
Q 002381 535 NGLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMFER 598 (929)
Q Consensus 535 ~~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~~~~~r 598 (929)
.-++.+|.+|+..+-. .++|.-.+.|..|.-.....|+.. +..+|.-.||.|+..+.+
T Consensus 6 ~~~~qiCqiCGD~VGl-----~~~Ge~FVAC~eC~fPvCr~CyEY-Erkeg~q~CpqCkt~ykr 63 (80)
T PF14569_consen 6 NLNGQICQICGDDVGL-----TENGEVFVACHECAFPVCRPCYEY-ERKEGNQVCPQCKTRYKR 63 (80)
T ss_dssp --SS-B-SSS--B--B------SSSSB--S-SSS-----HHHHHH-HHHTS-SB-TTT--B---
T ss_pred hcCCcccccccCcccc-----CCCCCEEEEEcccCCccchhHHHH-HhhcCcccccccCCCccc
Confidence 3567899999987654 347888899999976666677753 345678899999876543
No 160
>PF02591 DUF164: Putative zinc ribbon domain; InterPro: IPR003743 This entry describes proteins of unknown function.
Probab=45.22 E-value=7.6 Score=32.84 Aligned_cols=35 Identities=26% Similarity=0.654 Sum_probs=28.8
Q ss_pred CccccccccccccCCcccccCCCCceEeccCCCcc
Q 002381 537 LGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRA 571 (929)
Q Consensus 537 ~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~a 571 (929)
++..|.-|+..++++.+..-..+.+++.|+.|++.
T Consensus 21 ~~~~C~gC~~~l~~~~~~~i~~~~~i~~Cp~CgRi 55 (56)
T PF02591_consen 21 EGGTCSGCHMELPPQELNEIRKGDEIVFCPNCGRI 55 (56)
T ss_pred eCCccCCCCEEcCHHHHHHHHcCCCeEECcCCCcc
Confidence 44589999999999887766667899999999863
No 161
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=45.06 E-value=23 Score=42.10 Aligned_cols=78 Identities=18% Similarity=0.157 Sum_probs=44.5
Q ss_pred HHHHHHHHhhhhcCCCcccCCCCCCccccccccccCCCceecceEEEEEee-C---CeEEEEEEEEEeCCeeEEEeeeEe
Q 002381 754 LLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTV-N---SSVVSAGILRVFGQEVAELPLVAT 829 (929)
Q Consensus 754 s~La~AL~If~EcF~PiiD~rSgrDLIp~MVy~~~~~~~~f~GfY~~VL~~-~---~~vVsaA~lri~g~~~AElplVAT 829 (929)
....+-|-.|-..| +|++|= | .|...|.-+||.. | -.+||-=+=--.-.+--.|--|-|
T Consensus 252 ~~yCqnLcLlaKLF---LdhKtl--------y------ydV~~FlFYvl~e~d~~g~h~vGyFSKEk~s~~~~NLaCIlt 314 (450)
T PLN00104 252 KVYCQNLCYLAKLF---LDHKTL--------Y------YDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEEDYNLACILT 314 (450)
T ss_pred hhHHHHHHHHHHHh---hcCcce--------e------ccccceEEEEEEEecCCCcEEEEEecccccCcCCCceEEEEe
Confidence 45577777777888 344331 1 2334455555543 2 244442221111112235788899
Q ss_pred ecCccCCChhHHHHHHHHH
Q 002381 830 SKINHGKGYFQLLFACIEK 848 (929)
Q Consensus 830 ~~~yRgqG~gr~L~~~IE~ 848 (929)
.|.||++|||+.|++.-=+
T Consensus 315 lP~yQrkGyG~~LI~~SYe 333 (450)
T PLN00104 315 LPPYQRKGYGKFLIAFSYE 333 (450)
T ss_pred cchhhhcchhheehhheeh
Confidence 9999999999999875433
No 162
>KOG1246 consensus DNA-binding protein jumonji/RBP2/SMCY, contains JmjC domain [General function prediction only]
Probab=43.07 E-value=17 Score=46.69 Aligned_cols=48 Identities=31% Similarity=0.877 Sum_probs=38.4
Q ss_pred ccccccCCCCCCCCCCCCceeecCCCCCccCCCCCCcCcCCcccCCCCCcceEcCCCcch
Q 002381 640 GCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRI 699 (929)
Q Consensus 640 ~C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p~~~~~L~elP~g~WfCc~~C~~i 699 (929)
.|..|.+.. .+..+ .|+.|.+.||..|..+ +++.+|.+.|.| ..|...
T Consensus 157 ~~~~~~k~~------~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~ 204 (904)
T KOG1246|consen 157 QCNTCSKGK------EEKLL-LCDSCDDSYHTYCLRP----PLTRVPDGDWRC-PKCIPT 204 (904)
T ss_pred hhhccccCC------Cccce-ecccccCcccccccCC----CCCcCCcCcccC-Cccccc
Confidence 488887643 33345 9999999999999987 788899999997 677655
No 163
>PLN02400 cellulose synthase
Probab=42.70 E-value=20 Score=46.57 Aligned_cols=60 Identities=25% Similarity=0.626 Sum_probs=46.6
Q ss_pred ccCCccccccccccccCCcccccCCCCceEeccCCCcccccccCCCCCCCCCCccccccccccccc
Q 002381 534 KNGLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMFERK 599 (929)
Q Consensus 534 ~~~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~~~~~re 599 (929)
+.-++.+|.+|+..+-.. ++|+-.+-|..|.--....|+.- +..+|.=.||+|+..+.+.
T Consensus 32 ~~~~gqiCqICGD~VG~t-----~dGe~FVAC~eCaFPVCRpCYEY-ERkeGnq~CPQCkTrYkR~ 91 (1085)
T PLN02400 32 KNLNGQICQICGDDVGVT-----ETGDVFVACNECAFPVCRPCYEY-ERKDGTQCCPQCKTRYRRH 91 (1085)
T ss_pred cccCCceeeecccccCcC-----CCCCEEEEEccCCCccccchhhe-ecccCCccCcccCCccccc
Confidence 345678999999876543 47888899999988778888853 5567889999999876643
No 164
>PF10497 zf-4CXXC_R1: Zinc-finger domain of monoamine-oxidase A repressor R1; InterPro: IPR018866 R1 is a transcription factor repressor that inhibits monoamine oxidase A gene expression. This domain is a four-CXXC zinc finger putative DNA-binding domain found at the C-terminal end of R1. The domain carries 12 cysteines of which four pairs are of the CXXC type [].
Probab=42.38 E-value=12 Score=36.13 Aligned_cols=49 Identities=22% Similarity=0.593 Sum_probs=32.6
Q ss_pred CCccccccccccccCCcccccCCCCceEec------cCC---CcccccccCC------C-CCCCCCCcccccccc
Q 002381 536 GLGIICHCCNSEVSPSQFEAHADGGNLLPC------DGC---PRAFHKECAS------L-SSIPQGDWYCKYCQN 594 (929)
Q Consensus 536 ~~~i~C~~C~~~vSpS~FE~hadgG~Ll~C------D~C---p~aFH~~CL~------L-~~vP~g~W~Cp~C~~ 594 (929)
..+..|..|.... .+....| ..| ...|...||- + +.+.+.+|.||.|+.
T Consensus 5 ~~g~~CHqCrqKt----------~~~~~~C~~~~~~~~C~~~~~~fC~~CL~~ryge~~~ev~~~~~W~CP~Crg 69 (105)
T PF10497_consen 5 VNGKTCHQCRQKT----------LDFKTICTGHWKNSSCRGCRGKFCGGCLRNRYGENVEEVLEDPNWKCPKCRG 69 (105)
T ss_pred CCCCCchhhcCCC----------CCCceEcCCCCCCCCCccCcceehHhHHHHHHhhhHHHHhcCCceECCCCCC
Confidence 4577899998742 2223345 445 8888888883 2 234567899999975
No 165
>KOG1428 consensus Inhibitor of type V adenylyl cyclases/Neuronal presynaptic protein Highwire/PAM/RPM-1 [Signal transduction mechanisms]
Probab=42.14 E-value=5.5 Score=52.17 Aligned_cols=31 Identities=32% Similarity=0.727 Sum_probs=22.2
Q ss_pred CCCcccccccCC--CC------CCCCCCccccccccccc
Q 002381 567 GCPRAFHKECAS--LS------SIPQGDWYCKYCQNMFE 597 (929)
Q Consensus 567 ~Cp~aFH~~CL~--L~------~vP~g~W~Cp~C~~~~~ 597 (929)
+|.+.||+.|.. |+ .+-.|--.||.|.+++.
T Consensus 3506 ~C~HiFHlqC~R~vLE~RW~GPRItF~FisCPiC~n~In 3544 (3738)
T KOG1428|consen 3506 DCSHIFHLQCCRRVLENRWLGPRITFGFISCPICKNKIN 3544 (3738)
T ss_pred CCccchhHHHHHHHHHhcccCCeeEEeeeecccccchhh
Confidence 499999999984 21 22334578999998754
No 166
>PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine. This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A.
Probab=42.03 E-value=37 Score=39.14 Aligned_cols=108 Identities=19% Similarity=0.177 Sum_probs=56.7
Q ss_pred hhhHHHHHHHHHhhhhcC-CCcccCCCCCCccccccccccCCCceecceEEEEEee--CCeEEEEEEEEE-eC-------
Q 002381 750 PETRLLLSQAVAIFHDCF-DPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTV--NSSVVSAGILRV-FG------- 818 (929)
Q Consensus 750 ~e~~s~La~AL~If~EcF-~PiiD~rSgrDLIp~MVy~~~~~~~~f~GfY~~VL~~--~~~vVsaA~lri-~g------- 818 (929)
+.+...|..-+.-=.+.| ...++. --.-.|.+||+. .|+|||++.|.. .|
T Consensus 30 P~d~~~L~~rI~~S~~sFa~~~~~~-------------------~~~~~YlfVLED~~tg~vvGts~I~a~vG~~~PfY~ 90 (342)
T PF04958_consen 30 PPDREALAERIERSERSFAGRDVDF-------------------PGDEGYLFVLEDTETGEVVGTSAIEAAVGLDEPFYS 90 (342)
T ss_dssp -S-HHHHHHHHHHHHHHHH-TT-----------------------S--EEEEEEEETTT--EEEEEEEESSTTSSS---E
T ss_pred CCCHHHHHHHHHHHHHHhhccccCC-------------------CCccceEEEEEecCCCcEEEEEeEEeccCCCCCcEE
Confidence 455666666666556666 233221 012369999995 599999986532 11
Q ss_pred ----------------------------CeeEEEeeeEeecCccCCChhHHHHHHHHHH---hhhcCccEEEec----Ch
Q 002381 819 ----------------------------QEVAELPLVATSKINHGKGYFQLLFACIEKL---LSFLRVKSIVLP----AA 863 (929)
Q Consensus 819 ----------------------------~~~AElplVAT~~~yRgqG~gr~L~~~IE~~---l~~lgV~~LvLp----A~ 863 (929)
++..||--+-.+++||+-|.|+.|-.+=--. -++.=-++++.- ..
T Consensus 91 yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~R~~~~G~lLSr~RfLFiA~~~~rF~~~viAElrG~~D 170 (342)
T PF04958_consen 91 YRVSTLVHASRELGVRNRHETLTLSNDYTGCSELCTLFLDPDYRGGGNGRLLSRSRFLFIAQHRERFADRVIAELRGVSD 170 (342)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEEEE-TTTTSEEEEEEEE-GGGTTSHHHHHHHHHHHHHHHH-GGGS-SEEEEE--B---
T ss_pred EEcCceeEcCcccCCccceeeEeeecCCCCCeeeEEEEECHHHcCCchHHHHHHHHHHHHHhChhhcchheeeeccCCcC
Confidence 4678888889999999999998775431111 111112333321 22
Q ss_pred h-hhHHHHHhccCcE
Q 002381 864 E-EAESIWTDKFGFK 877 (929)
Q Consensus 864 ~-~a~~~w~~kfGF~ 877 (929)
+ .--|||.. +|=+
T Consensus 171 e~G~SPFWda-lG~~ 184 (342)
T PF04958_consen 171 EDGRSPFWDA-LGRH 184 (342)
T ss_dssp TT---HHHHH-TGGG
T ss_pred CCCCCchHHH-hhcc
Confidence 2 35789998 7644
No 167
>PF13832 zf-HC5HC2H_2: PHD-zinc-finger like domain
Probab=41.68 E-value=14 Score=34.97 Aligned_cols=31 Identities=35% Similarity=0.952 Sum_probs=26.5
Q ss_pred CccccccccccccCCcccccCCCCceEeccC--CCcccccccCC
Q 002381 537 LGIICHCCNSEVSPSQFEAHADGGNLLPCDG--CPRAFHKECAS 578 (929)
Q Consensus 537 ~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~--Cp~aFH~~CL~ 578 (929)
....|.+|++ ..|-.+-|.. |..+||..|..
T Consensus 54 ~~~~C~iC~~-----------~~G~~i~C~~~~C~~~fH~~CA~ 86 (110)
T PF13832_consen 54 FKLKCSICGK-----------SGGACIKCSHPGCSTAFHPTCAR 86 (110)
T ss_pred cCCcCcCCCC-----------CCceeEEcCCCCCCcCCCHHHHH
Confidence 4678999996 3688999998 99999999983
No 168
>COG5194 APC11 Component of SCF ubiquitin ligase and anaphase-promoting complex [Posttranslational modification, protein turnover, chaperones / Cell division and chromosome partitioning]
Probab=41.08 E-value=7 Score=36.07 Aligned_cols=29 Identities=21% Similarity=0.425 Sum_probs=21.2
Q ss_pred cCCCcccccccCCCCCCCCCCcccccccccc
Q 002381 566 DGCPRAFHKECASLSSIPQGDWYCKYCQNMF 596 (929)
Q Consensus 566 D~Cp~aFH~~CL~L~~vP~g~W~Cp~C~~~~ 596 (929)
..|.++||..|+. .+-+..-.||.+++.+
T Consensus 52 G~CnHaFH~HCI~--rWL~Tk~~CPld~q~w 80 (88)
T COG5194 52 GVCNHAFHDHCIY--RWLDTKGVCPLDRQTW 80 (88)
T ss_pred EecchHHHHHHHH--HHHhhCCCCCCCCcee
Confidence 4499999999994 3333367899988754
No 169
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=40.65 E-value=1.4e+02 Score=32.48 Aligned_cols=82 Identities=22% Similarity=0.147 Sum_probs=62.1
Q ss_pred cceEEEEEeeCCeEEEEEEEEEeC---------------------CeeEEEeeeEeec--CccCCCh----hHHHHHHHH
Q 002381 795 GGMYCAILTVNSSVVSAGILRVFG---------------------QEVAELPLVATSK--INHGKGY----FQLLFACIE 847 (929)
Q Consensus 795 ~GfY~~VL~~~~~vVsaA~lri~g---------------------~~~AElplVAT~~--~yRgqG~----gr~L~~~IE 847 (929)
.-.|.+.+..+|+|+|+++|-... ++++|.-++|++. .-+++|= ...||..+-
T Consensus 51 ~t~Yll~~~~~g~I~G~~RlLptt~P~mL~~vF~~Ll~~~~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~i 130 (209)
T COG3916 51 DTVYLLALTSDGRIVGCVRLLPTTGPYMLTDVFPALLEGGPPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMI 130 (209)
T ss_pred CceEEEEEcCCCcEEEEEEeccCCCcchhhhhhHHHhcCCCCCCCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHHH
Confidence 447888888899999999874321 4899999999998 5555553 567999999
Q ss_pred HHhhhcCccEEEecChhhhHHHHHhccCcE
Q 002381 848 KLLSFLRVKSIVLPAAEEAESIWTDKFGFK 877 (929)
Q Consensus 848 ~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~ 877 (929)
+.+...|+.+|+.=...-.+.+..+ .||.
T Consensus 131 e~a~~~G~~~IvtVt~~~meril~r-~Gw~ 159 (209)
T COG3916 131 EYALARGITGIVTVTDTGMERILRR-AGWP 159 (209)
T ss_pred HHHHHcCCceEEEEEchHHHHHHHH-cCCC
Confidence 9999999999997666555555554 5553
No 170
>PRK14852 hypothetical protein; Provisional
Probab=39.03 E-value=88 Score=40.89 Aligned_cols=64 Identities=19% Similarity=0.212 Sum_probs=53.1
Q ss_pred CeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCcEEcCHH
Q 002381 819 QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPE 882 (929)
Q Consensus 819 ~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~~i~~~ 882 (929)
..++|+-.+|+++..|.+=+--.|+..+-..+...++..+++---+.=..||++-|||+.+++.
T Consensus 119 r~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~~~~dd~~i~VnPkH~~FY~r~l~f~~ig~~ 182 (989)
T PRK14852 119 RNVVEVGALATQYSRRWTNLMVFLAKAMFQYSMMSEVDDILVTVNPKHVKFYTDIFLFKPFGEV 182 (989)
T ss_pred CeEEeeehheechhhcccchhHHHHHHHHHHHHHcCCCeEEEEECcchHHHHHHHhCCcccccc
Confidence 4699999999988777766555666666555667799999999999999999999999999873
No 171
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=38.77 E-value=1.5e+02 Score=32.67 Aligned_cols=57 Identities=7% Similarity=0.048 Sum_probs=47.3
Q ss_pred EeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEE
Q 002381 802 LTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIV 859 (929)
Q Consensus 802 L~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~Lv 859 (929)
...+|++||+|.+.+..+.+.-|-.+ =+|+|-..++|...+..-.+.++.+|.+.+-
T Consensus 149 y~~~g~LiaVav~D~l~d~lSAVY~F-yDPd~~~~SLG~~~iL~qI~~ak~~gl~y~Y 205 (240)
T PRK01305 149 FRGDGKLVAVAVTDVLDDGLSAVYTF-YDPDEEHRSLGTFAILWQIELAKRLGLPYVY 205 (240)
T ss_pred EEeCCeEEEEEEEeccCCceeeEEEe-eCCCccccCCHHHHHHHHHHHHHHcCCCeEe
Confidence 34789999999999888776655333 4888888889998888888899999999998
No 172
>PLN02436 cellulose synthase A
Probab=38.54 E-value=23 Score=46.07 Aligned_cols=58 Identities=22% Similarity=0.628 Sum_probs=45.5
Q ss_pred cCCccccccccccccCCcccccCCCCceEeccCCCcccccccCCCCCCCCCCcccccccccccc
Q 002381 535 NGLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMFER 598 (929)
Q Consensus 535 ~~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~~~~~r 598 (929)
...+.+|.+|+..+-.. ++|+-.+-|..|.-.....|+.- +..+|.-.||+|+..+.+
T Consensus 33 ~~~~~iCqICGD~Vg~t-----~dGe~FVACn~C~fpvCr~Cyey-er~eg~~~Cpqckt~Y~r 90 (1094)
T PLN02436 33 ELSGQTCQICGDEIELT-----VDGEPFVACNECAFPVCRPCYEY-ERREGNQACPQCKTRYKR 90 (1094)
T ss_pred ccCCccccccccccCcC-----CCCCEEEeeccCCCccccchhhh-hhhcCCccCcccCCchhh
Confidence 34677999999876443 37888899999988888888853 556788999999987654
No 173
>PF11793 FANCL_C: FANCL C-terminal domain; PDB: 3K1L_A.
Probab=38.06 E-value=15 Score=32.61 Aligned_cols=34 Identities=26% Similarity=0.710 Sum_probs=13.0
Q ss_pred ccccccCCCCCCCCCCCCceeecC--CCCCccCCCCCCc
Q 002381 640 GCLLCRGCDFSKSGFGPRTILLCD--QCEREFHVGCLKK 676 (929)
Q Consensus 640 ~C~iC~~~dfs~sg~~~~~LL~CD--qCdraYHv~CL~p 676 (929)
-|.||...-. ..+....+.|+ .|.+.||..||..
T Consensus 4 ~C~IC~~~~~---~~~~~p~~~C~n~~C~~~fH~~CL~~ 39 (70)
T PF11793_consen 4 ECGICYSYRL---DDGEIPDVVCPNPSCGKKFHLLCLSE 39 (70)
T ss_dssp S-SSS--SS----TT-----B--S-TT----B-SGGGHH
T ss_pred CCCcCCcEec---CCCCcCceEcCCcccCCHHHHHHHHH
Confidence 3889986421 11334568898 9999999999965
No 174
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=37.43 E-value=56 Score=37.66 Aligned_cols=49 Identities=18% Similarity=0.135 Sum_probs=37.9
Q ss_pred ceEEEEEee--CCeEEEEEEEEE-eC-----------------------------------CeeEEEeeeEeecCccCCC
Q 002381 796 GMYCAILTV--NSSVVSAGILRV-FG-----------------------------------QEVAELPLVATSKINHGKG 837 (929)
Q Consensus 796 GfY~~VL~~--~~~vVsaA~lri-~g-----------------------------------~~~AElplVAT~~~yRgqG 837 (929)
.-|.+||+. .|+|||++.|.. .| ++..||--+-.+++||+-|
T Consensus 54 ~~YlFVLEDt~tg~vvGts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~SElctLfL~p~~R~~~ 133 (336)
T TIGR03244 54 QGYLFVLEDTETGTVAGVSAIEAAVGLEEPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRKGG 133 (336)
T ss_pred ccEEEEEEeCCCCeEEEEEeEEecccCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCeeeEEEEECHHHcCCc
Confidence 478889985 589999886543 11 4678888888999999999
Q ss_pred hhHHHHH
Q 002381 838 YFQLLFA 844 (929)
Q Consensus 838 ~gr~L~~ 844 (929)
.|+.|-.
T Consensus 134 ~G~LLSr 140 (336)
T TIGR03244 134 NGRLLSK 140 (336)
T ss_pred chhhHHH
Confidence 9977643
No 175
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=36.97 E-value=22 Score=46.19 Aligned_cols=58 Identities=26% Similarity=0.698 Sum_probs=45.8
Q ss_pred cCCccccccccccccCCcccccCCCCceEeccCCCcccccccCCCCCCCCCCcccccccccccc
Q 002381 535 NGLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMFER 598 (929)
Q Consensus 535 ~~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~~~~~r 598 (929)
.-++.+|.+|+..+-.. ++|.-.+-|..|.-.....|+.- +..+|.=.||+|+..+.+
T Consensus 14 ~~~~qiCqICGD~vg~~-----~~Ge~FVAC~eC~FPVCrpCYEY-Er~eG~q~CPqCktrYkr 71 (1079)
T PLN02638 14 HGGGQVCQICGDNVGKT-----VDGEPFVACDVCAFPVCRPCYEY-ERKDGNQSCPQCKTKYKR 71 (1079)
T ss_pred ccCCceeeecccccCcC-----CCCCEEEEeccCCCccccchhhh-hhhcCCccCCccCCchhh
Confidence 34677999999876543 47888899999988888888853 566788999999887654
No 176
>KOG0827 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=36.87 E-value=7.5 Score=44.96 Aligned_cols=47 Identities=32% Similarity=0.625 Sum_probs=31.6
Q ss_pred cccccccccccCCcccccCCCCceEeccCCCcccccccCCCCCCCCCC-c--cccccccc
Q 002381 539 IICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGD-W--YCKYCQNM 595 (929)
Q Consensus 539 i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~~vP~g~-W--~Cp~C~~~ 595 (929)
..|.+|.. +-| ...++-.-..|++.||..|| .+|-++. | -||.|+-.
T Consensus 5 A~C~Ic~d-~~p-------~~~~l~~i~~cGhifh~~cl--~qwfe~~Ps~R~cpic~ik 54 (465)
T KOG0827|consen 5 AECHICID-GRP-------NDHELGPIGTCGHIFHTTCL--TQWFEGDPSNRGCPICQIK 54 (465)
T ss_pred ceeeEecc-CCc-------cccccccccchhhHHHHHHH--HHHHccCCccCCCCceeec
Confidence 46999942 222 13355556679999999999 5666553 5 69999833
No 177
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=36.82 E-value=55 Score=37.75 Aligned_cols=49 Identities=12% Similarity=0.025 Sum_probs=37.9
Q ss_pred ceEEEEEee--CCeEEEEEEEEE-eC-----------------------------------CeeEEEeeeEeecCccCCC
Q 002381 796 GMYCAILTV--NSSVVSAGILRV-FG-----------------------------------QEVAELPLVATSKINHGKG 837 (929)
Q Consensus 796 GfY~~VL~~--~~~vVsaA~lri-~g-----------------------------------~~~AElplVAT~~~yRgqG 837 (929)
-.|.+||+. .|+|||++.|.. .| ++..||--+-.+++||+-|
T Consensus 55 ~~YlFVLEDt~tg~vvGts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~ 134 (336)
T TIGR03245 55 ERYLFVLEDTETGKLLGTSSIVASAGYGEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRKTE 134 (336)
T ss_pred ccEEEEEEeCCCCcEEEEEeEEecccCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCC
Confidence 478899995 689999886543 11 4678888888999999999
Q ss_pred hhHHHHH
Q 002381 838 YFQLLFA 844 (929)
Q Consensus 838 ~gr~L~~ 844 (929)
.|+.|-.
T Consensus 135 ~G~lLSr 141 (336)
T TIGR03245 135 AAELLSR 141 (336)
T ss_pred chhHHHH
Confidence 9977643
No 178
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=36.51 E-value=57 Score=37.62 Aligned_cols=50 Identities=18% Similarity=0.128 Sum_probs=38.4
Q ss_pred cceEEEEEee--CCeEEEEEEEEE-eC-----------------------------------CeeEEEeeeEeecCccCC
Q 002381 795 GGMYCAILTV--NSSVVSAGILRV-FG-----------------------------------QEVAELPLVATSKINHGK 836 (929)
Q Consensus 795 ~GfY~~VL~~--~~~vVsaA~lri-~g-----------------------------------~~~AElplVAT~~~yRgq 836 (929)
.-.|.+||+. .|+|||++.|.. .| ++..||--+-.+++||+-
T Consensus 53 ~~~YlFVLED~~tg~vvGts~I~a~vG~~~PfY~yrv~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~ 132 (335)
T TIGR03243 53 EEGYLFVLEDTETGTVAGVSAIEAAVGLDEPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRKG 132 (335)
T ss_pred CccEEEEEEeCCCCeEEEEEeEEecccCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCC
Confidence 3478999995 689999886543 11 467888888899999999
Q ss_pred ChhHHHHH
Q 002381 837 GYFQLLFA 844 (929)
Q Consensus 837 G~gr~L~~ 844 (929)
|.|+.|-.
T Consensus 133 ~~G~LLSr 140 (335)
T TIGR03243 133 GNGRLLSR 140 (335)
T ss_pred CchhhHHH
Confidence 99977643
No 179
>KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=36.20 E-value=29 Score=43.25 Aligned_cols=29 Identities=14% Similarity=0.123 Sum_probs=24.3
Q ss_pred EEEeeeEeecCccCCChhHHHHHHHHHHh
Q 002381 822 AELPLVATSKINHGKGYFQLLFACIEKLL 850 (929)
Q Consensus 822 AElplVAT~~~yRgqG~gr~L~~~IE~~l 850 (929)
|.|-+|||+|+|++-|||.+-++-+.+..
T Consensus 615 aRIVRIAvhP~y~~MGYGsrAvqLL~~y~ 643 (1011)
T KOG2036|consen 615 ARIVRIAVHPEYQKMGYGSRAVQLLTDYF 643 (1011)
T ss_pred ceEEEEEeccchhccCccHHHHHHHHHHH
Confidence 56778999999999999988777776653
No 180
>PRK10456 arginine succinyltransferase; Provisional
Probab=36.05 E-value=55 Score=37.87 Aligned_cols=50 Identities=20% Similarity=0.117 Sum_probs=38.1
Q ss_pred cceEEEEEee--CCeEEEEEEEEE-eC-----------------------------------CeeEEEeeeEeecCccCC
Q 002381 795 GGMYCAILTV--NSSVVSAGILRV-FG-----------------------------------QEVAELPLVATSKINHGK 836 (929)
Q Consensus 795 ~GfY~~VL~~--~~~vVsaA~lri-~g-----------------------------------~~~AElplVAT~~~yRgq 836 (929)
...|.+||+. .|+|||++.|.. .| ++..||--+-.+++||+-
T Consensus 55 ~~~YlFVLED~~tg~vvGts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfl~p~~R~~ 134 (344)
T PRK10456 55 EQGYVFVLEDSETGTVAGICAIEVAVGLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKE 134 (344)
T ss_pred CccEEEEEEeCCCCcEEEEEeEEecccCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCceeEEEEECHHHcCC
Confidence 3478899985 689999886543 11 456788888899999999
Q ss_pred ChhHHHHH
Q 002381 837 GYFQLLFA 844 (929)
Q Consensus 837 G~gr~L~~ 844 (929)
|.|+.|-.
T Consensus 135 ~~G~LLSr 142 (344)
T PRK10456 135 GNGYLLSK 142 (344)
T ss_pred CchhHHHH
Confidence 99977643
No 181
>KOG1493 consensus Anaphase-promoting complex (APC), subunit 11 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=35.84 E-value=6.2 Score=36.15 Aligned_cols=58 Identities=21% Similarity=0.420 Sum_probs=33.9
Q ss_pred ccccccccccccCC--cccccCCCCceEeccCCCcccccccCC-CCCCCCCCcccccccccc
Q 002381 538 GIICHCCNSEVSPS--QFEAHADGGNLLPCDGCPRAFHKECAS-LSSIPQGDWYCKYCQNMF 596 (929)
Q Consensus 538 ~i~C~~C~~~vSpS--~FE~hadgG~Ll~CD~Cp~aFH~~CL~-L~~vP~g~W~Cp~C~~~~ 596 (929)
+..|.+|+..+..+ +....+|.=.|++- .|.+.||..|+. .-..|...=.||.|++.+
T Consensus 20 ~e~CGiCRm~Fdg~Cp~Ck~PgDdCPLv~G-~C~h~fh~hCI~~wl~~~tsq~~CPmcRq~~ 80 (84)
T KOG1493|consen 20 DETCGICRMPFDGCCPDCKLPGDDCPLVWG-YCLHAFHAHCILKWLNTPTSQGQCPMCRQTW 80 (84)
T ss_pred CCccceEecccCCcCCCCcCCCCCCccHHH-HHHHHHHHHHHHHHhcCccccccCCcchhee
Confidence 44899998754211 11111122223222 477899999984 334555668999999764
No 182
>KOG1701 consensus Focal adhesion adaptor protein Paxillin and related LIM proteins [Signal transduction mechanisms]
Probab=34.68 E-value=21 Score=41.91 Aligned_cols=35 Identities=26% Similarity=0.543 Sum_probs=21.8
Q ss_pred ccccccCCCCCCCCCCCCceeecCCCCCccCCCCCCc
Q 002381 640 GCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKK 676 (929)
Q Consensus 640 ~C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p 676 (929)
.|.+|++.-....|-+ +.+.=-.=+|-||++|...
T Consensus 396 rCs~C~~PI~P~~G~~--etvRvvamdr~fHv~CY~C 430 (468)
T KOG1701|consen 396 RCSVCGNPILPRDGKD--ETVRVVAMDRDFHVNCYKC 430 (468)
T ss_pred chhhccCCccCCCCCc--ceEEEEEccccccccceeh
Confidence 4999987655444422 2333334468899999865
No 183
>KOG1298 consensus Squalene monooxygenase [Lipid transport and metabolism]
Probab=34.54 E-value=31 Score=40.61 Aligned_cols=186 Identities=22% Similarity=0.263 Sum_probs=96.4
Q ss_pred cccccccchhhHHhhhcccccceeEEeeEeeEEEEEEeccCCCCCCccccchhhhhhhhhcccccchHHHHHHHhhhccc
Q 002381 21 LPQAGIQASDCVKAACENVRCKRFKVTKVNGFIVYSRVKRSRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENG 100 (929)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (929)
|-+.|++ |||+-. .-.+|+|+-+|--=+.-.-+-...-.++|+- -...|.||..|-+.+..
T Consensus 97 L~~LGl~--Dcve~I---------DAQ~v~Gy~ifk~gk~v~~pyP~~~f~~d~~----GrsFhnGRFvq~lR~ka---- 157 (509)
T KOG1298|consen 97 LSKLGLE--DCVEGI---------DAQRVTGYAIFKDGKEVDLPYPLKNFPSDPS----GRSFHNGRFVQRLRKKA---- 157 (509)
T ss_pred HHHhCHH--HHhhcc---------cceEeeeeEEEeCCceeeccCCCcCCCCCcc----cceeeccHHHHHHHHHH----
Confidence 3444554 898643 3456899999964333332222222345543 44689999999887732
Q ss_pred chhhhHHhhh-hhhcchHHHHHHHH--hhCCCCCCccCCCCCcccceecCCCCcccc--cCccc---c--ccCCcccCCC
Q 002381 101 ILESVVEEEN-QLVQMTVENVIEET--VKGKKAPICKEEPISKVECFPRKEGGSEVS--NGLNK---K--CLKRPSAMKP 170 (929)
Q Consensus 101 ~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~--~~~trs~~k~ 170 (929)
..++| ++.|=||..++||- +||.+ ..+++|.+.+ .++.. . -+|+||+-++
T Consensus 158 -----~slpNV~~eeGtV~sLlee~gvvkGV~---------------yk~k~gee~~~~ApLTvVCDGcfSnlRrsL~~~ 217 (509)
T KOG1298|consen 158 -----ASLPNVRLEEGTVKSLLEEEGVVKGVT---------------YKNKEGEEVEAFAPLTVVCDGCFSNLRRSLCDP 217 (509)
T ss_pred -----hcCCCeEEeeeeHHHHHhccCeEEeEE---------------EecCCCceEEEecceEEEecchhHHHHHHhcCC
Confidence 12222 22233555544432 33332 3344444443 34432 2 4788999999
Q ss_pred CCCcccccccccc--CCCCC--------------------ccchhhhhhhhcCCCCCCCCcccccccc-ccccCCCCCch
Q 002381 171 KVEPVEVLVTQSE--GFGNE--------------------SMSLIEVEAIAEGSALTSPKKNLELKMS-KKISLNKKPMT 227 (929)
Q Consensus 171 k~e~~~~~~~~~~--~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~k~~-kk~~~~~~p~~ 227 (929)
||+++.+.-.+.- +-... +++++++--. -.++.-|+-.|.||+.. |+..--.+|..
T Consensus 218 ~v~~V~S~fVG~vl~N~~l~~p~hghvIL~~pspil~Y~ISStEvRcl~~-v~g~~~Psi~~gem~~~mk~~v~PqiP~~ 296 (509)
T KOG1298|consen 218 KVEEVPSYFVGLVLKNCRLPAPNHGHVILSKPSPILVYQISSTEVRCLVD-VPGQKLPSIANGEMATYMKESVAPQIPEK 296 (509)
T ss_pred cccccchheeeeeecCCCCCCCCcceEEecCCCcEEEEEecchheEEEEe-cCcccCCcccchhHHHHHHHhhCcCCCHH
Confidence 9998765443321 11000 0111111111 11333455667676543 44445568999
Q ss_pred hHHhhhc----CCCCCceEEEEc
Q 002381 228 VTELFET----GLLDGVSVVYMG 246 (929)
Q Consensus 228 vk~Ll~t----glleg~~V~Y~~ 246 (929)
+|+-+.. |-+--+|=+||.
T Consensus 297 lR~~F~~av~~g~irsmpn~~mp 319 (509)
T KOG1298|consen 297 LRESFLEAVDEGNIRSMPNSSMP 319 (509)
T ss_pred HHHHHHHHhhccchhcCccccCC
Confidence 9988654 444455666654
No 184
>PLN02189 cellulose synthase
Probab=33.95 E-value=29 Score=45.04 Aligned_cols=58 Identities=24% Similarity=0.626 Sum_probs=45.2
Q ss_pred cCCccccccccccccCCcccccCCCCceEeccCCCcccccccCCCCCCCCCCcccccccccccc
Q 002381 535 NGLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMFER 598 (929)
Q Consensus 535 ~~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~~~~~r 598 (929)
..++..|.+|+..+... ++|.-.+-|..|.-.....|+.- +..+|.-.||+|+..+.+
T Consensus 31 ~~~~~~C~iCgd~vg~~-----~~g~~fvaC~~C~fpvCr~Cyey-er~eg~q~CpqCkt~Y~r 88 (1040)
T PLN02189 31 NLDGQVCEICGDEIGLT-----VDGDLFVACNECGFPVCRPCYEY-ERREGTQNCPQCKTRYKR 88 (1040)
T ss_pred cccCccccccccccCcC-----CCCCEEEeeccCCCccccchhhh-hhhcCCccCcccCCchhh
Confidence 34677999999876543 37777899999988888888853 556788999999887654
No 185
>PF13901 DUF4206: Domain of unknown function (DUF4206)
Probab=33.57 E-value=37 Score=36.10 Aligned_cols=46 Identities=35% Similarity=0.795 Sum_probs=33.5
Q ss_pred CCcccccccccc--ccCCcccccCCCCceEeccCCCcccccccCCCCCCCCCCcccccccc
Q 002381 536 GLGIICHCCNSE--VSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQN 594 (929)
Q Consensus 536 ~~~i~C~~C~~~--vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~~ 594 (929)
..|-+|.+|+.. +-| | +-.....|..|...||..|..- -.||.|..
T Consensus 150 ~kGfiCe~C~~~~~IfP--F----~~~~~~~C~~C~~v~H~~C~~~-------~~CpkC~R 197 (202)
T PF13901_consen 150 QKGFICEICNSDDIIFP--F----QIDTTVRCPKCKSVFHKSCFRK-------KSCPKCAR 197 (202)
T ss_pred hCCCCCccCCCCCCCCC--C----CCCCeeeCCcCccccchhhcCC-------CCCCCcHh
Confidence 467788889853 333 2 2356889999999999999951 23999964
No 186
>KOG1246 consensus DNA-binding protein jumonji/RBP2/SMCY, contains JmjC domain [General function prediction only]
Probab=33.09 E-value=30 Score=44.63 Aligned_cols=49 Identities=33% Similarity=0.815 Sum_probs=38.3
Q ss_pred CccccccccccccCCcccccCCCCceEeccCCCcccccccCC--CCCCCCCCccccccccc
Q 002381 537 LGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNM 595 (929)
Q Consensus 537 ~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~--L~~vP~g~W~Cp~C~~~ 595 (929)
....|..|.+.-. . .++.|++|...||..|.. +..+++++|.|+.|...
T Consensus 154 ~~~~~~~~~k~~~---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (904)
T KOG1246|consen 154 DYPQCNTCSKGKE---------E-KLLLCDSCDDSYHTYCLRPPLTRVPDGDWRCPKCIPT 204 (904)
T ss_pred cchhhhccccCCC---------c-cceecccccCcccccccCCCCCcCCcCcccCCccccc
Confidence 3456888886321 2 344999999999999996 78899999999999754
No 187
>KOG1632 consensus Uncharacterized PHD Zn-finger protein [General function prediction only]
Probab=32.79 E-value=24 Score=40.65 Aligned_cols=43 Identities=21% Similarity=0.484 Sum_probs=34.1
Q ss_pred ceeecCCCCCccCCCC--CCcCcCCcccCCCCCcceEcCCCcchhHHHH
Q 002381 658 TILLCDQCEREFHVGC--LKKHKMADLRELPKGKWFCCMDCSRINSVLQ 704 (929)
Q Consensus 658 ~LL~CDqCdraYHv~C--L~p~~~~~L~elP~g~WfCc~~C~~i~~~Lq 704 (929)
.++.||.|..|||..| ++. +-.+..+...|+| ..|+.....++
T Consensus 74 ~~~~cd~C~~~~~~ec~~v~~---~~~e~p~~~~~~c-~~c~~~~~~~~ 118 (345)
T KOG1632|consen 74 LMEQCDLCEDWYHGECWEVGT---AEKEAPKEDPKVC-DECKEAQDGMS 118 (345)
T ss_pred hhhccccccccccccccccCc---hhhcCCccccccc-cccchhhhhhh
Confidence 6789999999999999 654 3444555678999 99998876665
No 188
>PHA02926 zinc finger-like protein; Provisional
Probab=32.19 E-value=22 Score=38.77 Aligned_cols=61 Identities=21% Similarity=0.386 Sum_probs=34.9
Q ss_pred cccCCccccccccccccCCcccccCCCCceEeccCCCcccccccCC-CCC---CCCCCcccccccccc
Q 002381 533 YKNGLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECAS-LSS---IPQGDWYCKYCQNMF 596 (929)
Q Consensus 533 ~~~~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~-L~~---vP~g~W~Cp~C~~~~ 596 (929)
+....+..|++|.+.+..-.-+...-.|- =+.|.+.|+..|+. +.. -......||.|+..+
T Consensus 165 ~~~SkE~eCgICmE~I~eK~~~~eRrFGI---L~~CnHsFCl~CIr~Wr~~r~~~~~~rsCPiCR~~f 229 (242)
T PHA02926 165 YRVSKEKECGICYEVVYSKRLENDRYFGL---LDSCNHIFCITCINIWHRTRRETGASDNCPICRTRF 229 (242)
T ss_pred HhccCCCCCccCccccccccccccccccc---cCCCCchHHHHHHHHHHHhccccCcCCcCCCCccee
Confidence 34456789999997542110000001232 34677889999984 221 112358899999764
No 189
>PF07649 C1_3: C1-like domain; InterPro: IPR011424 This short domain is rich in cysteines and histidines. The pattern of conservation is similar to that found in IPR002219 from INTERPRO. C1 domains are protein kinase C-like zinc finger structures. Diacylglycerol (DAG) kinases (DGKs) have a two or three commonly conserved cysteine-rich C1 domains []. DGKs modulate the balance between the two signaling lipids, DAG and phosphatidic acid (PA), by phosphorylating DAG to yield PA []. The PKD (protein kinase D) family are novel DAG receptors. They have twin C1 domains, designated C1a and C1b, which bind DAG or phorbol esters. Individual C1 domains differ in ligand-binding activity and selectivity []. ; GO: 0047134 protein-disulfide reductase activity, 0055114 oxidation-reduction process; PDB: 1V5N_A.
Probab=31.99 E-value=15 Score=27.35 Aligned_cols=27 Identities=22% Similarity=0.566 Sum_probs=11.9
Q ss_pred cccccCCCCCCCCCCCCceeecCCCCCccCCCC
Q 002381 641 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGC 673 (929)
Q Consensus 641 C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~C 673 (929)
|..|+... +......|.+|+-..|..|
T Consensus 3 C~~C~~~~------~~~~~Y~C~~Cdf~lH~~C 29 (30)
T PF07649_consen 3 CDACGKPI------DGGWFYRCSECDFDLHEEC 29 (30)
T ss_dssp -TTTS----------S--EEE-TTT-----HHH
T ss_pred CCcCCCcC------CCCceEECccCCCccChhc
Confidence 88888753 2247899999999999887
No 190
>PF10367 Vps39_2: Vacuolar sorting protein 39 domain 2; InterPro: IPR019453 This entry represents a domain found in the vacuolar sorting protein Vps39 and transforming growth factor beta receptor-associated protein Trap1. Vps39, a component of the C-Vps complex, is thought to be required for the fusion of endosomes and other types of transport intermediates with the vacuole [, ]. In Saccharomyces cerevisiae (Baker's yeast), Vps39 has been shown to stimulate nucleotide exchange []. Trap1 plays a role in the TGF-beta/activin signaling pathway. It associates with inactive heteromeric TGF-beta and activin receptor complexes, mainly through the type II receptor, and is released upon activation of signaling [, ]. The precise function of this domain has not been characterised In Vps39 this domain is involved in localisation and in mediating the interactions with Vps11 [].
Probab=30.73 E-value=36 Score=31.36 Aligned_cols=33 Identities=21% Similarity=0.438 Sum_probs=22.2
Q ss_pred CCccccccccccccCCcccccCCCCceEeccCCCcccccccCC
Q 002381 536 GLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECAS 578 (929)
Q Consensus 536 ~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~ 578 (929)
..+..|.+|++.+..+.| .---|+..||..|+.
T Consensus 76 ~~~~~C~vC~k~l~~~~f----------~~~p~~~v~H~~C~~ 108 (109)
T PF10367_consen 76 TESTKCSVCGKPLGNSVF----------VVFPCGHVVHYSCIK 108 (109)
T ss_pred CCCCCccCcCCcCCCceE----------EEeCCCeEEeccccc
Confidence 456679999997753322 222455899999973
No 191
>PF13901 DUF4206: Domain of unknown function (DUF4206)
Probab=30.12 E-value=63 Score=34.38 Aligned_cols=35 Identities=17% Similarity=0.176 Sum_probs=25.7
Q ss_pred CccccccccCCc-cHHHHHHHhhcCChhhHHHHHHH
Q 002381 292 RASQYICFENGK-SLLEVLRACRSVPLPMLKATLQS 326 (929)
Q Consensus 292 ~p~~~I~lenG~-sL~~v~~~~~~~~l~~l~~~i~~ 326 (929)
.+.+|++-+... ||.|+++--.+.=+..|+.+++.
T Consensus 102 ~~~~hl~~~~~~YSl~DL~~v~~G~L~~~L~~l~~~ 137 (202)
T PF13901_consen 102 QPRDHLLEDPHLYSLADLVQVKSGQLLPQLEKLVQF 137 (202)
T ss_pred cchhhhhhCCceEcHHHHHHHhhchHHHHHHHHHHH
Confidence 567887655455 99999998777766667776665
No 192
>COG5027 SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=29.45 E-value=29 Score=39.94 Aligned_cols=75 Identities=17% Similarity=0.221 Sum_probs=44.4
Q ss_pred HHHHHHHHHhhhhcCCCcccCCCCCCccccccccccCCCceecceEEEEEeeCCe----EEEEEEEEEeCCeeEEEeeeE
Q 002381 753 RLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSS----VVSAGILRVFGQEVAELPLVA 828 (929)
Q Consensus 753 ~s~La~AL~If~EcF~PiiD~rSgrDLIp~MVy~~~~~~~~f~GfY~~VL~~~~~----vVsaA~lri~g~~~AElplVA 828 (929)
+..+.+-|-.+..+| +|.+ |+| +|..+|--+||...|. +||-=+=--...+--.|--|-
T Consensus 207 q~~~CrnLCLlsKlF---Ld~K--------tLY------yDVDpflFYvl~~~~~~~~h~vGyFSKEK~S~~~yNLaCIL 269 (395)
T COG5027 207 QRLYCRNLCLLSKLF---LDHK--------TLY------YDVDPFLFYVLTERGDTGCHLVGYFSKEKESEQDYNLACIL 269 (395)
T ss_pred hhhHHHHHHHHHHHH---hcCc--------eeE------EeccceEEEEEEEcCCcceeeeeeechhhcccccCceEEEE
Confidence 455677777788888 2321 222 3555655555565443 222211111112335577888
Q ss_pred eecCccCCChhHHHHH
Q 002381 829 TSKINHGKGYFQLLFA 844 (929)
Q Consensus 829 T~~~yRgqG~gr~L~~ 844 (929)
|.|.|||+|||..|++
T Consensus 270 tLP~yQRrGYG~lLId 285 (395)
T COG5027 270 TLPPYQRRGYGKLLID 285 (395)
T ss_pred ecChhHhcccceEeee
Confidence 9999999999999876
No 193
>TIGR02174 CXXU_selWTH selT/selW/selH selenoprotein domain. This model represents a domain found in both bacteria and animals, including animal proteins SelT, SelW, and SelH, all of which are selenoproteins. In a CXXC motif near the N-terminus of the domain, selenocysteine may replace the second Cys. Proteins with this domain may include an insert of about 70 amino acids. This model is broader than the current SelW model pfam05169 in Pfam.
Probab=28.99 E-value=37 Score=30.25 Aligned_cols=29 Identities=34% Similarity=0.680 Sum_probs=23.8
Q ss_pred ccceeEEeeEeeEEEEEEeccCCCCCCccc
Q 002381 40 RCKRFKVTKVNGFIVYSRVKRSRFSNSDDL 69 (929)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (929)
+=-.|.|+ |||-+||||++..+|-..+.|
T Consensus 39 ~~G~Fev~-~~g~~v~sk~~~~~fp~~~~~ 67 (72)
T TIGR02174 39 TTGAFEVT-VNGQLVWSKLRGGGFPEPEEL 67 (72)
T ss_pred CCcEEEEE-ECCEEEEEeccCCCCCCHHHH
Confidence 44579997 799999999999998876654
No 194
>COG5540 RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=28.68 E-value=20 Score=40.57 Aligned_cols=49 Identities=22% Similarity=0.432 Sum_probs=34.2
Q ss_pred CCccccccccccccCCcccccCCCCceEeccCCCcccccccCCCCCCCC-CCccccccccc
Q 002381 536 GLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQ-GDWYCKYCQNM 595 (929)
Q Consensus 536 ~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~~vP~-g~W~Cp~C~~~ 595 (929)
+.|.-|.+|-+.+. .++-+.---|.+.||..|++ .|-. ....||-|+..
T Consensus 321 ~~GveCaICms~fi---------K~d~~~vlPC~H~FH~~Cv~--kW~~~y~~~CPvCrt~ 370 (374)
T COG5540 321 DKGVECAICMSNFI---------KNDRLRVLPCDHRFHVGCVD--KWLLGYSNKCPVCRTA 370 (374)
T ss_pred CCCceEEEEhhhhc---------ccceEEEeccCceechhHHH--HHHhhhcccCCccCCC
Confidence 45678999986543 23334455578899999994 4444 46889999864
No 195
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=26.71 E-value=43 Score=43.64 Aligned_cols=56 Identities=25% Similarity=0.600 Sum_probs=44.4
Q ss_pred CccccccccccccCCcccccCCCCceEeccCCCcccccccCCCCCCCCCCcccccccccccc
Q 002381 537 LGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMFER 598 (929)
Q Consensus 537 ~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~~~~~r 598 (929)
.+.+|.+|+..+-.. ++|.-.+-|..|.-.....|+.- +..+|.=.||+|+..+.+
T Consensus 14 ~~~~c~iCGd~vg~~-----~~Ge~FVAC~eC~fpvCr~cyey-e~~~g~~~cp~c~t~y~~ 69 (1044)
T PLN02915 14 DAKTCRVCGDEVGVK-----EDGQPFVACHVCGFPVCKPCYEY-ERSEGNQCCPQCNTRYKR 69 (1044)
T ss_pred CcchhhccccccCcC-----CCCCEEEEeccCCCccccchhhh-hhhcCCccCCccCCchhh
Confidence 677899999876543 47778899999988888888853 566788999999887654
No 196
>PRK13361 molybdenum cofactor biosynthesis protein A; Provisional
Probab=25.39 E-value=1.7e+02 Score=33.10 Aligned_cols=68 Identities=22% Similarity=0.267 Sum_probs=51.4
Q ss_pred eeeEEEeCCeEEeeCcCCCCceeeCcchhhhcccccccCccccccccCCccHHHHHHHhhcCCh-hhHHHHHHHHhcCCC
Q 002381 254 GLRGIIRDGGILCSCSLCNGCRVIPPSKFEIHACKQYRRASQYICFENGKSLLEVLRACRSVPL-PMLKATLQSALSSLP 332 (929)
Q Consensus 254 ~l~G~i~~~GilC~C~~C~~~~v~s~s~FE~HAG~~~~~p~~~I~lenG~sL~~v~~~~~~~~l-~~l~~~i~~~~g~~~ 332 (929)
..-|.|...... +|..|| +--||+ ...+|.+ +|-++|.+|+++++. ++.. +.|.++|+.++..-|
T Consensus 242 ~~ig~I~~~s~~-fC~~Cn-r~rlt~-~G~l~~C---------l~~~~~~~l~~~l~~--~~~~~~~l~~~~~~~~~~k~ 307 (329)
T PRK13361 242 IHIGFISPHSHN-FCHECN-RVRVTA-EGQLLLC---------LGNEHASDLRSILRE--GPGDIERLKAAILAAINLKP 307 (329)
T ss_pred eEEEEEcCCCcc-ccccCC-eEEEcc-CCcEEec---------CCCCCCcchHHHHhc--CCCcHHHHHHHHHHHHHcCc
Confidence 558999987776 999998 456666 6677776 677889999988765 4445 379999999888765
Q ss_pred ccc
Q 002381 333 EEK 335 (929)
Q Consensus 333 ~~~ 335 (929)
...
T Consensus 308 ~~~ 310 (329)
T PRK13361 308 KGH 310 (329)
T ss_pred ccc
Confidence 433
No 197
>PF10497 zf-4CXXC_R1: Zinc-finger domain of monoamine-oxidase A repressor R1; InterPro: IPR018866 R1 is a transcription factor repressor that inhibits monoamine oxidase A gene expression. This domain is a four-CXXC zinc finger putative DNA-binding domain found at the C-terminal end of R1. The domain carries 12 cysteines of which four pairs are of the CXXC type [].
Probab=24.90 E-value=23 Score=34.12 Aligned_cols=52 Identities=27% Similarity=0.598 Sum_probs=32.4
Q ss_pred ccccccCCCCCCCCCCCCceeec------CCC---CCccCCCCCCcCc-CCcccCCCCCcceEcCCCcch
Q 002381 640 GCLLCRGCDFSKSGFGPRTILLC------DQC---EREFHVGCLKKHK-MADLRELPKGKWFCCMDCSRI 699 (929)
Q Consensus 640 ~C~iC~~~dfs~sg~~~~~LL~C------DqC---draYHv~CL~p~~-~~~L~elP~g~WfCc~~C~~i 699 (929)
.|+.|++.. .+..+.| ..| ...|=-.||...- +...+.+...+|.| +.|..|
T Consensus 9 ~CHqCrqKt-------~~~~~~C~~~~~~~~C~~~~~~fC~~CL~~ryge~~~ev~~~~~W~C-P~Crgi 70 (105)
T PF10497_consen 9 TCHQCRQKT-------LDFKTICTGHWKNSSCRGCRGKFCGGCLRNRYGENVEEVLEDPNWKC-PKCRGI 70 (105)
T ss_pred CchhhcCCC-------CCCceEcCCCCCCCCCccCcceehHhHHHHHHhhhHHHHhcCCceEC-CCCCCe
Confidence 488888743 2233556 566 8888889986542 11223345688999 678653
No 198
>PF10262 Rdx: Rdx family; InterPro: IPR011893 This entry represents the Rdx family of selenoproteins, which includes mammalian selenoproteins SelW, SelV, SelT and SelH, bacterial SelW-like proteins and cysteine-containing proteins of unknown function in all three domains of life. Mammalian Rdx12 and its fish selenoprotein orthologues are also members of this family []. These proteins possess a thioredoxin-like fold and a conserved CXXC or CxxU (U is selenocysteine) motif near the N terminus, suggesting a redox function. Rdx proteins can use catalytic cysteine (or selenocysteine) to form transient mixed disulphides with substrate proteins. Selenium (Se) plays an essential role in cell survival and most of the effects of Se are probably mediated by selenoproteins. Selenoprotein W (SelW) plays an important role in protection of neurons from oxidative stress during neuronal development [], []. Selenoprotein T (SelT) is conserved from plants to humans. SelT is localized to the endoplasmic reticulum through a hydrophobic domain. The protein binds to UDP-glucose:glycoprotein glucosyltransferase (UGTR), the endoplasmic reticulum (ER)-resident protein, which is known to be involved in the quality control of protein folding [, ]. The function of SelT is unknown, although it may have a role in PACAP signaling during PC12 cell differentiation [, ]. Selenoprotein H (SelH) protects neurons against UVB-induced damage by inhibiting apoptotic cell death pathways, by preventing mitochondrial depolarization, and by promoting cell survival pathways [].; GO: 0008430 selenium binding, 0045454 cell redox homeostasis; PDB: 2OJL_B 2FA8_A 2P0G_C 2NPB_A 3DEX_C 2OKA_A 2OBK_G.
Probab=24.55 E-value=21 Score=31.91 Aligned_cols=27 Identities=37% Similarity=0.778 Sum_probs=21.0
Q ss_pred cceeEEeeEeeEEEEEEeccCCCCCCcc
Q 002381 41 CKRFKVTKVNGFIVYSRVKRSRFSNSDD 68 (929)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (929)
=-.|.|+ |||-+|||++...+|-+.+.
T Consensus 42 ~G~FEV~-v~g~lI~SK~~~g~fP~~~~ 68 (76)
T PF10262_consen 42 TGAFEVT-VNGELIFSKLESGRFPDPDE 68 (76)
T ss_dssp TT-EEEE-ETTEEEEEHHHHTSSS-HHH
T ss_pred CCEEEEE-EccEEEEEehhcCCCCCHHH
Confidence 3469985 89999999999998887655
No 199
>KOG1642 consensus Ribonuclease, T2 family [RNA processing and modification]
Probab=23.77 E-value=41 Score=37.27 Aligned_cols=59 Identities=19% Similarity=0.221 Sum_probs=45.0
Q ss_pred eeeCcchhhhccccccc-Cc--cccccccCCccHHH---HHHHhhcC---------ChhhHHHHHHHHhcCCCc
Q 002381 275 RVIPPSKFEIHACKQYR-RA--SQYICFENGKSLLE---VLRACRSV---------PLPMLKATLQSALSSLPE 333 (929)
Q Consensus 275 ~v~s~s~FE~HAG~~~~-~p--~~~I~lenG~sL~~---v~~~~~~~---------~l~~l~~~i~~~~g~~~~ 333 (929)
.-+=.-+||.|.-++.- .| ++|=||+.+..|++ ++..|.++ +|+.++.||+.++|..|.
T Consensus 116 ~~fW~HEweKHGTCa~sv~~~~dq~~YF~~~L~l~~k~~l~~~L~~~gI~p~~~~y~l~~I~nAi~~~~G~~p~ 189 (263)
T KOG1642|consen 116 ESFWKHEWEKHGTCASSVFPLCDQHKYFETTLKLKQKLDLLSILKKAGIKPDDNFYSLADIKNAIKEAIGKTPG 189 (263)
T ss_pred chhhhhhhhccCchhhhhhhhhhHHHHHHHHHHHHHHHhHHHHHHHcCCCCCCCceeHHHHHHHHHHHhCCCCc
Confidence 34455688999877654 56 89999999998875 55665543 488899999999998864
No 200
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=23.76 E-value=58 Score=32.36 Aligned_cols=49 Identities=12% Similarity=0.274 Sum_probs=30.0
Q ss_pred eecCccCCChhHHHHHHHHHHhhhcCccEEEecChh-hhHHHHHhccCcEE
Q 002381 829 TSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAE-EAESIWTDKFGFKK 878 (929)
Q Consensus 829 T~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~-~a~~~w~~kfGF~~ 878 (929)
|++..||+|+|+.|++.+.+. -.+....+-++--. -...|..+-+|-..
T Consensus 54 Vhes~QR~G~Gk~LF~~ML~~-e~~~p~~~a~DrPS~Kll~Fl~Khy~L~~ 103 (120)
T PF05301_consen 54 VHESRQRRGYGKRLFDHMLQE-ENVSPHQLAIDRPSPKLLSFLKKHYGLQR 103 (120)
T ss_pred EEeceeccCchHHHHHHHHHH-cCCCcccceecCCcHHHHHHHHHhcCCCc
Confidence 789999999999999987765 22223333333222 24555555455543
No 201
>PF07227 DUF1423: Protein of unknown function (DUF1423); InterPro: IPR004082 A total of 715 potential protein-coding genes have been identified in the nucleotide sequence of Arabidopsis thaliana chromosome 5, with an average gene density of 1 gene per 4001 bp []. Amongst the gene products is a well-conserved family of 130.7kDa proteins that share no sequence similarity with any other known proteins, other than in plants. The sequences are characterised by an N-terminal domain of variable length, a central cysteine-rich region and a relatively acidic C-terminal domain. The sequences may possess a PHD finger.
Probab=22.67 E-value=72 Score=38.01 Aligned_cols=45 Identities=24% Similarity=0.548 Sum_probs=32.4
Q ss_pred CcccccCCCCceEeccCCCcccccccCC---CC----------CCCCCCccccccccc
Q 002381 551 SQFEAHADGGNLLPCDGCPRAFHKECAS---LS----------SIPQGDWYCKYCQNM 595 (929)
Q Consensus 551 S~FE~hadgG~Ll~CD~Cp~aFH~~CL~---L~----------~vP~g~W~Cp~C~~~ 595 (929)
..|....++-..+-||.|++.-|..|.= +- ...++.++|..|...
T Consensus 135 ~kfD~~~n~~~Wi~Cd~CgH~cH~dCALr~~~i~~G~s~~g~~g~~d~~f~C~~C~~~ 192 (446)
T PF07227_consen 135 SKFDDNKNTCSWIGCDVCGHWCHLDCALRHELIGTGPSVKGSIGTLDMQFHCRACGKT 192 (446)
T ss_pred CCcccCCCCeeEEeccCCCceehhhhhcccccccCCccCCCCCccCceEEEccCCCCh
Confidence 3465566777889999999999999961 10 013457999999753
No 202
>PF14545 DBB: Dof, BCAP, and BANK (DBB) motif,
Probab=22.50 E-value=3e+02 Score=28.27 Aligned_cols=63 Identities=19% Similarity=0.245 Sum_probs=47.9
Q ss_pred cceEEEEEeeCCeEEEEEEEEEeCCeeEEEeeeEeecCccCCChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhcc
Q 002381 795 GGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKF 874 (929)
Q Consensus 795 ~GfY~~VL~~~~~vVsaA~lri~g~~~AElplVAT~~~yRgqG~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kf 874 (929)
.|++.+-++.||.++|++.|-.+.+ |.+||++|+. |+...+-+=.. |
T Consensus 65 ag~V~v~v~~~g~~~~~~~ikyys~-----------------------~~el~~lL~~---------~~~PvefmCQa-~ 111 (142)
T PF14545_consen 65 AGSVNVRVYCDGVSLGTRQIKYYSR-----------------------MRELEQLLRK---------AANPVEFMCQA-F 111 (142)
T ss_pred CceEEEEEEECCEEEEEEeEEEEec-----------------------HHHHHHHHHh---------cCChhhhhhhh-c
Confidence 7899999999999999999988764 5678888876 22233334444 9
Q ss_pred CcEEcCHHHHHHHHHh
Q 002381 875 GFKKIDPELLSIYRKR 890 (929)
Q Consensus 875 GF~~i~~~~l~~~~~~ 890 (929)
|+.+.+.++|..+...
T Consensus 112 ~i~p~~~E~LD~~Lt~ 127 (142)
T PF14545_consen 112 GISPNDREELDNLLTE 127 (142)
T ss_pred CCCCCCHHHHHHHHHH
Confidence 9999999998877544
No 203
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.42 E-value=37 Score=43.07 Aligned_cols=38 Identities=21% Similarity=0.546 Sum_probs=27.8
Q ss_pred ccccccccccCCcccccCCCCceEe-ccCCCcccccccCCCCCCCCCCcccccccc
Q 002381 540 ICHCCNSEVSPSQFEAHADGGNLLP-CDGCPRAFHKECASLSSIPQGDWYCKYCQN 594 (929)
Q Consensus 540 ~C~~C~~~vSpS~FE~hadgG~Ll~-CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~~ 594 (929)
.|+.|...+ ++.. --.|+++||+.|+. +++--||.|+.
T Consensus 842 kCs~C~~~L------------dlP~VhF~CgHsyHqhC~e-----~~~~~CP~C~~ 880 (933)
T KOG2114|consen 842 KCSACEGTL------------DLPFVHFLCGHSYHQHCLE-----DKEDKCPKCLP 880 (933)
T ss_pred eecccCCcc------------ccceeeeecccHHHHHhhc-----cCcccCCccch
Confidence 699998522 2222 22499999999996 66788999986
No 204
>PF13771 zf-HC5HC2H: PHD-like zinc-binding domain
Probab=22.26 E-value=50 Score=29.91 Aligned_cols=32 Identities=34% Similarity=0.884 Sum_probs=25.5
Q ss_pred CCccccccccccccCCcccccCCCCceEeccC--CCcccccccCC
Q 002381 536 GLGIICHCCNSEVSPSQFEAHADGGNLLPCDG--CPRAFHKECAS 578 (929)
Q Consensus 536 ~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~--Cp~aFH~~CL~ 578 (929)
.....|.+|++ ..|-.+-|.. |...||..|.-
T Consensus 34 ~~~~~C~~C~~-----------~~Ga~i~C~~~~C~~~fH~~CA~ 67 (90)
T PF13771_consen 34 RRKLKCSICKK-----------KGGACIGCSHPGCSRSFHVPCAR 67 (90)
T ss_pred HhCCCCcCCCC-----------CCCeEEEEeCCCCCcEEChHHHc
Confidence 44568999996 2477888875 99999999984
No 205
>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only]
Probab=21.39 E-value=39 Score=40.13 Aligned_cols=46 Identities=22% Similarity=0.346 Sum_probs=31.1
Q ss_pred CccccccccccccCCcccccCCCCceEeccCCCcccccccCCCCCCCCCCcccccccc
Q 002381 537 LGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQN 594 (929)
Q Consensus 537 ~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~~ 594 (929)
+-.-|.+|.+-+.+|- ..+.---|.++||-.|+. .|. +-.||-|+.
T Consensus 174 ELPTCpVCLERMD~s~--------~gi~t~~c~Hsfh~~cl~--~w~--~~scpvcR~ 219 (493)
T KOG0804|consen 174 ELPTCPVCLERMDSST--------TGILTILCNHSFHCSCLM--KWW--DSSCPVCRY 219 (493)
T ss_pred cCCCcchhHhhcCccc--------cceeeeecccccchHHHh--hcc--cCcChhhhh
Confidence 4566999997665432 234445678999999993 443 456888875
No 206
>PF07943 PBP5_C: Penicillin-binding protein 5, C-terminal domain; InterPro: IPR012907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry contains proteins that are annotated as penicillin-binding protein 5 and 6. These belong to MEROPS peptidase family S11 (D-Ala-D-Ala carboxypeptidase A family, clan SE). Penicillin-binding protein 5 expressed by Escherichia coli functions as a D-alanyl-D-alanine carboxypeptidase. It is composed of two domains that are oriented at approximately right angles to each other. The N-terminal domain (IPR001967 from INTERPRO) is the catalytic domain. The C-terminal domain, this entry, is organised into a sandwich of two anti-parallel beta-sheets, and has a relatively hydrophobic surface as compared to the N-terminal domain. Its precise function is unknown; it may mediate interactions with other cell wall-synthesising enzymes, thus allowing the protein to be recruited to areas of active cell wall synthesis. It may also function as a linker domain that positions the active site in the catalytic domain closer to the peptidoglycan layer, to allow it to interact with cell wall peptides []. ; GO: 0009002 serine-type D-Ala-D-Ala carboxypeptidase activity, 0006508 proteolysis; PDB: 3A3J_A 3MFD_B 1XP4_D 3MZD_A 1NZU_A 1NJ4_A 1Z6F_A 3MZF_A 1NZO_A 3MZE_A ....
Probab=21.34 E-value=1.1e+02 Score=27.45 Aligned_cols=27 Identities=30% Similarity=0.438 Sum_probs=23.5
Q ss_pred CCeEEEEEEEEEeCCeeEEEeeeEeec
Q 002381 805 NSSVVSAGILRVFGQEVAELPLVATSK 831 (929)
Q Consensus 805 ~~~vVsaA~lri~g~~~AElplVAT~~ 831 (929)
-|+.||.+.+..-|..++++|++|...
T Consensus 62 kG~~vG~~~v~~~~~~i~~vpL~a~~~ 88 (91)
T PF07943_consen 62 KGQVVGTLTVYLDGKLIGEVPLVASED 88 (91)
T ss_dssp TTSEEEEEEEEETTEEEEEEEEEESS-
T ss_pred CCCEEEEEEEEECCEEEEEEEEEECCc
Confidence 489999999988888999999999754
No 207
>KOG1829 consensus Uncharacterized conserved protein, contains C1, PH and RUN domains [Signal transduction mechanisms]
Probab=21.31 E-value=26 Score=43.00 Aligned_cols=37 Identities=16% Similarity=0.327 Sum_probs=27.4
Q ss_pred CCccccccccccccCCcccccCCCCceEeccCCCcccccccCC
Q 002381 536 GLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECAS 578 (929)
Q Consensus 536 ~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~ 578 (929)
-.+..|..|+..+.+. --...-+|+-++.-||..|..
T Consensus 338 aQ~~~CAgC~~~i~~~------~~~~~R~C~y~G~y~C~~Ch~ 374 (580)
T KOG1829|consen 338 AQNFRCAGCGHTIGPD------LEQRPRLCRYLGKYFCDCCHQ 374 (580)
T ss_pred ccCceecccCCCcccc------cccchhHhhhhhhhhCchhcc
Confidence 3567899999876542 134566788899999998984
No 208
>PF10080 DUF2318: Predicted membrane protein (DUF2318); InterPro: IPR018758 This domain of unknown function is found in hypothetical bacterial membrane proteins with no known function.
Probab=21.30 E-value=55 Score=31.59 Aligned_cols=61 Identities=26% Similarity=0.510 Sum_probs=42.0
Q ss_pred CCccccccccccCCCCCCCcc------ccccccccCCccccccccccccCCcccccCCCCceEeccCCCcccccccCC
Q 002381 507 PKDQRLHKLVFDESGLPDGTE------KLLEGYKNGLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECAS 578 (929)
Q Consensus 507 ~rD~~Lhk~vF~~~~l~Dgte------~ll~G~~~~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~ 578 (929)
.+|..||+-.+.. +|++ +.-+|...-.-+.|.+|+.. .|. ..|+-+.|..|+..|+..=++
T Consensus 2 v~Dgklh~y~y~~----~G~~vrff~i~~~dg~~~va~daCeiC~~~----GY~---q~g~~lvC~~C~~~~~~~~ig 68 (102)
T PF10080_consen 2 VKDGKLHRYAYTD----DGKEVRFFAIKKPDGSYRVAFDACEICGPK----GYY---QEGDQLVCKNCGVRFNLPTIG 68 (102)
T ss_pred ccCCcEEEEEEcC----CCEEEEEEEEECCCCCEEEEEEeccccCCC----ceE---EECCEEEEecCCCEEehhhcc
Confidence 4688899977733 5666 33456666677889999642 222 346777899999988876664
No 209
>KOG0317 consensus Predicted E3 ubiquitin ligase, integral peroxisomal membrane protein [Posttranslational modification, protein turnover, chaperones]
Probab=21.29 E-value=33 Score=38.59 Aligned_cols=54 Identities=17% Similarity=0.263 Sum_probs=36.2
Q ss_pred ccccCCccccccccccccCCcccccCCCCceEeccCCCcccccccCCCCCCCCCCccccccccccccc
Q 002381 532 GYKNGLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMFERK 599 (929)
Q Consensus 532 G~~~~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~~~~~re 599 (929)
..+....-.|.+|.+..+ -..|--|++.|...|+- .|-...--||-|+..+++.
T Consensus 233 ~~i~~a~~kC~LCLe~~~------------~pSaTpCGHiFCWsCI~--~w~~ek~eCPlCR~~~~ps 286 (293)
T KOG0317|consen 233 SSIPEATRKCSLCLENRS------------NPSATPCGHIFCWSCIL--EWCSEKAECPLCREKFQPS 286 (293)
T ss_pred ccCCCCCCceEEEecCCC------------CCCcCcCcchHHHHHHH--HHHccccCCCcccccCCCc
Confidence 344456678999996432 23577899999999993 3332233399999876643
No 210
>KOG4628 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=21.26 E-value=46 Score=38.50 Aligned_cols=46 Identities=28% Similarity=0.665 Sum_probs=30.2
Q ss_pred CccccccCCCCCCCCCCCCceeecCCCCCccCCCCCCcCcCCcccCCCCCcceEcCCCcc
Q 002381 639 SGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSR 698 (929)
Q Consensus 639 ~~C~iC~~~dfs~sg~~~~~LL~CDqCdraYHv~CL~p~~~~~L~elP~g~WfCc~~C~~ 698 (929)
..|+||-+. | ..+..+.==-|...||..|+++- |.. -.=+| +.|++
T Consensus 230 ~~CaIClEd-Y-----~~GdklRiLPC~H~FH~~CIDpW----L~~---~r~~C-PvCK~ 275 (348)
T KOG4628|consen 230 DTCAICLED-Y-----EKGDKLRILPCSHKFHVNCIDPW----LTQ---TRTFC-PVCKR 275 (348)
T ss_pred ceEEEeecc-c-----ccCCeeeEecCCCchhhccchhh----Hhh---cCccC-CCCCC
Confidence 379999874 2 33333333578999999999872 211 12378 79976
No 211
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=20.79 E-value=1.4e+02 Score=32.60 Aligned_cols=43 Identities=9% Similarity=0.159 Sum_probs=39.8
Q ss_pred ChhHHHHHHHHHHhhhcCccEEEecChhhhHHHHHhccCcEEcC
Q 002381 837 GYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKID 880 (929)
Q Consensus 837 G~gr~L~~~IE~~l~~lgV~~LvLpA~~~a~~~w~~kfGF~~i~ 880 (929)
|-...|+..++++++..|..+|++-...+..+.|.+ .||...+
T Consensus 21 ~~~~~~~~~~~~~a~~~~~~ki~~~~~~~~~~~~~~-~g~~~e~ 63 (266)
T TIGR03827 21 NDVEALIPDLDALAKKEGYTKIIAKVPGSDKPLFEE-RGYLEEA 63 (266)
T ss_pred ccHHHHHHHHHHHHHHcCCcEEEEEccHHHHHHHHH-CCCeEEE
Confidence 447899999999999999999999999999999999 9999883
No 212
>COG1675 TFA1 Transcription initiation factor IIE, alpha subunit [Transcription]
Probab=20.77 E-value=62 Score=34.12 Aligned_cols=65 Identities=23% Similarity=0.311 Sum_probs=47.2
Q ss_pred cccccccc--CCccHHHHHHHhhcCChhhHHHHHHHHhcCCCcccceeeccccCcc--ccccCCCCCCCCCCCcccc
Q 002381 293 ASQYICFE--NGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSFACVRCKGTF--PITCVGKTGPGPLCNSCVK 365 (929)
Q Consensus 293 p~~~I~le--nG~sL~~v~~~~~~~~l~~l~~~i~~~~g~~~~~~~~~c~~ck~~~--~~~~~~~~~~~~~c~~c~~ 365 (929)
+..++|++ |..-+.+++..-.+-+++.|+..++... +...|.|.+|.-.+ ..+... + +.|+.|-+
T Consensus 72 ~~~~~y~w~~~~~~v~~~l~~~~~~~le~Lk~~le~~~----~~~~y~C~~~~~r~sfdeA~~~--~--F~Cp~Cg~ 140 (176)
T COG1675 72 SGWEEYTWYINYEKVLEVLKGKKRKILEKLKRKLEKET----ENNYYVCPNCHVKYSFDEAMEL--G--FTCPKCGE 140 (176)
T ss_pred CCcEEEEEEechHHHHHHHHHHHHHHHHHHHHHHHhhc----cCCceeCCCCCCcccHHHHHHh--C--CCCCCCCc
Confidence 34555555 8888999999999999999999998533 44589999887644 333332 2 77988865
No 213
>KOG2932 consensus E3 ubiquitin ligase involved in ubiquitination of E-cadherin complex [Posttranslational modification, protein turnover, chaperones]
Probab=20.77 E-value=36 Score=38.61 Aligned_cols=44 Identities=30% Similarity=0.734 Sum_probs=28.8
Q ss_pred cccccccccccCCcccccCCCCceEeccCCCcccccccCCCCCCCCCCccccccccccc
Q 002381 539 IICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMFE 597 (929)
Q Consensus 539 i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~~~~~ 597 (929)
-+|.-|...|-. .|.||-|+ ++|.+.|.-+.. +-.|+.|..+++
T Consensus 91 HfCd~Cd~PI~I--------YGRmIPCk---HvFCl~CAr~~~----dK~Cp~C~d~Vq 134 (389)
T KOG2932|consen 91 HFCDRCDFPIAI--------YGRMIPCK---HVFCLECARSDS----DKICPLCDDRVQ 134 (389)
T ss_pred EeecccCCccee--------eecccccc---hhhhhhhhhcCc----cccCcCcccHHH
Confidence 468889876543 78999887 244444443322 678999976544
No 214
>PF00130 C1_1: Phorbol esters/diacylglycerol binding domain (C1 domain); InterPro: IPR002219 Diacylglycerol (DAG) is an important second messenger. Phorbol esters (PE) are analogues of DAG and potent tumour promoters that cause a variety of physiological changes when administered to both cells and tissues. DAG activates a family of serine/threonine protein kinases, collectively known as protein kinase C (PKC) []. Phorbol esters can directly stimulate PKC. The N-terminal region of PKC, known as C1, has been shown [] to bind PE and DAG in a phospholipid and zinc-dependent fashion. The C1 region contains one or two copies (depending on the isozyme of PKC) of a cysteine-rich domain, which is about 50 amino-acid residues long, and which is essential for DAG/PE-binding. The DAG/PE-binding domain binds two zinc ions; the ligands of these metal ions are probably the six cysteines and two histidines that are conserved in this domain.; GO: 0035556 intracellular signal transduction; PDB: 1RFH_A 2FNF_X 3PFQ_A 1PTQ_A 1PTR_A 2VRW_B 1XA6_A 2ENN_A 1TBN_A 1TBO_A ....
Probab=20.35 E-value=98 Score=25.33 Aligned_cols=36 Identities=25% Similarity=0.449 Sum_probs=26.8
Q ss_pred CCccccccccccccCCcccccCCCCceEeccCCCcccccccCC
Q 002381 536 GLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECAS 578 (929)
Q Consensus 536 ~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~ 578 (929)
.....|..|++.+.. ....-+.|..|....|..|+.
T Consensus 9 ~~~~~C~~C~~~i~g-------~~~~g~~C~~C~~~~H~~C~~ 44 (53)
T PF00130_consen 9 SKPTYCDVCGKFIWG-------LGKQGYRCSWCGLVCHKKCLS 44 (53)
T ss_dssp SSTEB-TTSSSBECS-------SSSCEEEETTTT-EEETTGGC
T ss_pred CCCCCCcccCcccCC-------CCCCeEEECCCCChHhhhhhh
Confidence 345689999987632 256788999999999999995
No 215
>KOG1081 consensus Transcription factor NSD1 and related SET domain proteins [Transcription]
Probab=20.30 E-value=64 Score=38.71 Aligned_cols=46 Identities=24% Similarity=0.533 Sum_probs=37.5
Q ss_pred CCccccccccccccCCcccccCCCCceEeccCCCcccccccCCCCCCCCCCcccccccc
Q 002381 536 GLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQN 594 (929)
Q Consensus 536 ~~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~~ 594 (929)
.+...|.+|. ++|.+++|+.|..++|..|... ..|...|.|..|..
T Consensus 87 ~~~~~c~vc~------------~ggs~v~~~s~~~~~~r~c~~~-~~~~c~~~~~d~~~ 132 (463)
T KOG1081|consen 87 IEPSECFVCF------------KGGSLVTCKSRIQAPHRKCKPA-QLEKCSKRCTDCRA 132 (463)
T ss_pred CCcchhcccc------------CCCccceeccccccccccCcCc-cCcccccCCcceee
Confidence 3566799998 6999999999999999999864 56677788887764
No 216
>PLN02195 cellulose synthase A
Probab=20.01 E-value=72 Score=41.44 Aligned_cols=55 Identities=25% Similarity=0.640 Sum_probs=43.5
Q ss_pred CccccccccccccCCcccccCCCCceEeccCCCcccccccCCCCCCCCCCccccccccccc
Q 002381 537 LGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMFE 597 (929)
Q Consensus 537 ~~i~C~~C~~~vSpS~FE~hadgG~Ll~CD~Cp~aFH~~CL~L~~vP~g~W~Cp~C~~~~~ 597 (929)
.+.+|.+|+..+... ++|.-.+-|..|.-.....|+.- +..+|.=.||+|+..+.
T Consensus 5 ~~~~c~~cgd~~~~~-----~~g~~fvaC~eC~~pvCrpCyey-er~eg~q~CpqCkt~Yk 59 (977)
T PLN02195 5 GAPICATCGEEVGVD-----SNGEAFVACHECSYPLCKACLEY-EIKEGRKVCLRCGGPYD 59 (977)
T ss_pred CCccceecccccCcC-----CCCCeEEEeccCCCccccchhhh-hhhcCCccCCccCCccc
Confidence 567899999876543 36777899999988888889853 55678899999987765
Done!