Query 002383
Match_columns 929
No_of_seqs 283 out of 1243
Neff 8.2
Searched_HMMs 46136
Date Thu Mar 28 22:47:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002383.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002383hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1959 Glycosyl hydrolase, fa 100.0 1E-226 3E-231 1879.6 73.4 901 1-929 3-913 (996)
2 PLN02701 alpha-mannosidase 100.0 1E-179 3E-184 1634.3 87.7 838 19-908 24-950 (1050)
3 KOG1958 Glycosyl hydrolase, fa 100.0 2E-165 4E-170 1388.0 57.7 839 19-909 146-1052(1129)
4 PRK09819 alpha-mannosidase; Pr 100.0 9E-105 2E-109 983.5 76.7 771 35-918 3-823 (875)
5 KOG4342 Alpha-mannosidase [Car 100.0 4.2E-76 9.2E-81 639.4 42.6 623 33-813 278-933 (1078)
6 PF01074 Glyco_hydro_38: Glyco 100.0 2.5E-60 5.3E-65 517.0 25.6 270 37-349 1-275 (275)
7 COG0383 AMS1 Alpha-mannosidase 100.0 9.8E-49 2.1E-53 476.6 29.8 671 36-922 198-897 (943)
8 PF07748 Glyco_hydro_38C: Glyc 100.0 4.6E-40 9.9E-45 385.1 35.9 377 485-921 1-399 (457)
9 PF09261 Alpha-mann_mid: Alpha 99.8 5.6E-22 1.2E-26 172.4 3.3 75 354-428 1-80 (80)
10 smart00872 Alpha-mann_mid Alph 99.8 2.2E-20 4.7E-25 162.0 5.7 74 355-428 1-79 (79)
11 COG0383 AMS1 Alpha-mannosidase 99.7 9.2E-20 2E-24 223.5 -2.0 358 34-430 2-389 (943)
12 PF03065 Glyco_hydro_57: Glyco 98.4 8E-07 1.7E-11 100.7 10.4 120 71-192 29-195 (360)
13 COG1543 Uncharacterized conser 96.4 0.0087 1.9E-07 67.0 7.6 122 68-191 75-207 (504)
14 PF01522 Polysacc_deac_1: Poly 95.6 0.098 2.1E-06 49.1 10.2 104 71-187 17-122 (123)
15 COG1449 Alpha-amylase/alpha-ma 94.2 1.2 2.7E-05 53.7 16.6 98 89-188 162-263 (615)
16 TIGR02764 spore_ybaN_pdaB poly 92.8 0.96 2.1E-05 46.3 11.1 101 75-188 22-124 (191)
17 TIGR02884 spore_pdaA delta-lac 92.0 1.2 2.7E-05 46.8 10.9 100 76-188 54-156 (224)
18 TIGR03006 pepcterm_polyde poly 89.7 2.9 6.4E-05 45.1 11.3 111 68-190 24-138 (265)
19 TIGR03212 uraD_N-term-dom puta 89.1 13 0.00028 40.9 15.9 111 70-194 75-187 (297)
20 TIGR02873 spore_ylxY probable 88.4 4.9 0.00011 43.5 11.9 101 74-187 100-202 (268)
21 PRK14582 pgaB outer membrane N 86.2 20 0.00043 43.8 16.4 151 110-315 168-347 (671)
22 PRK14581 hmsF outer membrane N 82.8 7.2 0.00016 47.5 10.6 81 109-192 167-275 (672)
23 PF07481 DUF1521: Domain of Un 76.4 24 0.00052 34.4 9.7 95 595-704 8-103 (171)
24 PRK15394 4-deoxy-4-formamido-L 66.1 2.1E+02 0.0046 31.5 16.8 80 110-193 92-175 (296)
25 PF08672 APC2: Anaphase promot 64.2 8.1 0.00018 31.5 3.2 23 106-128 36-58 (60)
26 TIGR03826 YvyF flagellar opero 43.5 19 0.00041 34.6 2.6 52 68-126 26-77 (137)
27 PF12395 DUF3658: Protein of u 30.1 81 0.0017 29.2 4.5 69 37-132 40-108 (111)
28 TIGR03593 yidC_nterm membrane 29.9 2.9E+02 0.0063 31.3 10.0 29 594-622 73-101 (366)
29 PRK10148 hypothetical protein; 28.4 21 0.00047 34.8 0.3 17 160-176 123-139 (147)
30 PF10074 DUF2285: Uncharacteri 25.2 14 0.00031 33.9 -1.5 29 98-129 74-102 (106)
31 COG0726 CDA1 Predicted xylanas 23.0 7.1E+02 0.015 25.8 11.1 114 49-186 66-181 (267)
32 PF13289 SIR2_2: SIR2-like dom 21.8 4.5E+02 0.0097 24.6 8.3 84 88-186 58-141 (143)
33 PHA02097 hypothetical protein 21.8 1.1E+02 0.0023 23.8 2.9 30 892-921 4-33 (59)
34 PRK13654 magnesium-protoporphy 20.6 1.3E+02 0.0028 33.2 4.3 49 68-118 41-90 (355)
35 TIGR03092 SASP_sspI small, aci 20.5 1.1E+02 0.0024 25.2 2.9 25 95-119 39-63 (65)
36 PF06044 DRP: Dam-replacing fa 20.1 1.7E+02 0.0038 30.8 5.0 59 70-128 185-250 (254)
No 1
>KOG1959 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-226 Score=1879.61 Aligned_cols=901 Identities=52% Similarity=0.853 Sum_probs=822.7
Q ss_pred CCccchhhhHHHHhhhcccceeeEecCCCCCCCCceEEEEEecccCCCccchhhhheeecCCcchhhHHHHHHHHHHHHH
Q 002383 1 MANQVCLVVVLFLCLLCVESKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPA 80 (929)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VhlVpHSH~D~gWl~T~~ey~~~~~~~i~~~~v~~il~~vi~~ 80 (929)
|++.++++|+|++++.......+ |++|+...+++++||||||||+|+||||||||||+|++|.||+++|++|||+||++
T Consensus 3 l~~~~~~l~~l~lli~~~~~~~~-y~t~~~~~~~~invHlVPHSHDDVGWLKTVDQyy~G~~n~Iq~AgVqyIldSVV~e 81 (996)
T KOG1959|consen 3 LNKFLLFLCLLLLLISLVESRAG-YNTCHKVVPNMINVHLVPHSHDDVGWLKTVDQYYYGSKNKIQHAGVQYILDSVVEE 81 (996)
T ss_pred cccchHHHHHHHHHHHHHhHhhc-cCCCccccCceeEEEecCCccCccceeeeehhheecCCcccchhhHHHHHHHHHHH
Confidence 34556666666555555444444 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCeEEEechhHHHHHHhccChHHHHHHHHHHHcCCEEEEcceeeecccCCCChHHHHHHHHHHHHHHHHHcC--C
Q 002383 81 LVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFN--V 158 (929)
Q Consensus 81 L~~~p~~kF~~~e~~~~~~ww~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~I~ql~~G~~~l~~~fG--~ 158 (929)
|.+||+||||++|++||.+||++|++++|+.||+||++||||||||||||||||++||.++||||++||+||.++|| .
T Consensus 82 Ll~dp~RRFI~VE~aFF~rWW~~qS~~~k~~Vk~LV~~GrLEFi~Ggw~MnDEA~~hY~dvIDQ~TlGlrfL~~tFG~cg 161 (996)
T KOG1959|consen 82 LLKDPNRRFIYVETAFFARWWNEQSETQKEQVKKLVNEGRLEFIGGGWSMNDEATTHYQDVIDQFTLGLRFLKDTFGECG 161 (996)
T ss_pred HhcCCccceehhhHHHHHHHHHhcCHHHHHHHHHHHhcCCEEEecCeeeecchhhhhHHHHHHHHHHHHHHHHHHhcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 7
Q ss_pred CCceeeecCCCCCchhhHHHHHhhcCCcEEEEeecChHhHHHhhhcCceeEEEeeCCCCCCCCceeeeeCCCCCCCCCCC
Q 002383 159 TPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDN 238 (929)
Q Consensus 159 ~p~v~W~iD~FGhs~~~p~ll~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~~~d~~~~gs~i~th~~~~~Y~~p~~~ 238 (929)
+|++||||||||||+.||+|| ++|||++.+|+||||+||+.|..++.|||+|+|++++++.++|||++||+||++| +|
T Consensus 162 rPrvgWqIDPFGHSreqAslf-AqmGfd~~fFaRiDy~dK~~R~~~~~lE~iW~~S~sL~~~~~iFTg~l~n~Y~~P-~g 239 (996)
T KOG1959|consen 162 RPRVGWQIDPFGHSREQASLF-AQMGFDGVFFARIDYQDKAKRMKEKTLEMIWRGSESLGSSSQIFTGALYNHYSPP-PG 239 (996)
T ss_pred CcceeeeeCCCCcchHHHHHH-HHhCccchheeecchhhHHHHHhhccceEEeecCccccchhhhhhhccccCCCCC-CC
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999 99
Q ss_pred CCcccCCCCCCccCCccccCCChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCcchHHHHHHHHHHHHHHhcC---C
Q 002383 239 FYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQD---G 315 (929)
Q Consensus 239 f~f~~~~~~~p~~~~~~i~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~~~n~~~li~~~N~~---~ 315 (929)
||||.+|.+.|++|++.+.+|||++|++.|++.++.++..|+|||||+|||+||+|.+|..||+||||||+|+|+. +
T Consensus 240 fc~dv~c~d~Pi~D~~~~~d~NVkerVd~Fv~~a~~~a~~~RtnHim~~MG~DFqY~~A~v~fknmDkLI~yVN~~qa~g 319 (996)
T KOG1959|consen 240 FCFDVLCGDDPIIDGPRSYDYNVKERVDDFVAYAKNQAAYYRTNHIMWPMGDDFQYENANVWFKNMDKLIKYVNERQADG 319 (996)
T ss_pred ceeccccCCCCCCCCCCCCCccHHHHHHHHHHHHHHhHhheecceEEEeccCCceehhhhHHHhhHHHHHHHhhhhhcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999943 4
Q ss_pred -CeeEEEcChhhHHHHHHhcCCCCCCcccCCccccccCCCceeeeeccchhhhHHHHHHhHHHHHHHHHHhhhcccc--C
Q 002383 316 -RVNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGRNE--V 392 (929)
Q Consensus 316 -~~~i~~sT~~~Yf~al~~~~~~~p~~~gDffpy~~~~~~yWtGyyTSRp~~K~~~R~~e~~L~~ae~l~~l~~~~~--~ 392 (929)
++++.||||+||++|+++.+..||+++.|||||++++|+||||||||||.+|++.|.++++|++|++|.+++++.. .
T Consensus 320 s~vnv~YSTpscYl~alh~~~~Twp~Kt~DFFPYa~~~~syWTGyFTSRPa~Kr~~R~~s~~lq~akQL~~la~l~~~~~ 399 (996)
T KOG1959|consen 320 SKVNVFYSTPSCYLNALHAANQTWPVKTDDFFPYASEPHSYWTGYFTSRPALKRFERDGSHYLQVAKQLSVLAGLSSTEQ 399 (996)
T ss_pred ceEEEEEcChHHHHHHHHHhcCcccccccccCcCCCCCCcceeeeccccHHHHHHHhhhhHHHHHHHHHhhhcCCCcccc
Confidence 7999999999999999999999999999999999999999999999999999999999999999999999998654 5
Q ss_pred CCchHHHHHHHHhhhccccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCcccccccccccccC
Q 002383 393 GLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYC 472 (929)
Q Consensus 393 ~~~~~~l~~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~ln~s~~ 472 (929)
.+.++.|+++|++.|||||||||+|++|.+||.++|..|+..|+++++.+|+.|.... ..+|++|++||+|+|
T Consensus 400 ~~dl~~Lream~i~QHHDAVTGTekq~Va~DY~r~La~g~~~~e~~~~~aL~~lt~~~-------~~~f~~C~~lNiS~C 472 (996)
T KOG1959|consen 400 GPDLDYLREAMAIMQHHDAVTGTEKQHVADDYARRLADGILGAEKLARDALRKLTNLP-------NGEFQSCLLLNISEC 472 (996)
T ss_pred CccHHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-------CccchhhhhhccccC
Confidence 6789999999999999999999999999999999999999999999999999998743 347899999999999
Q ss_pred CCCccccCCCceEEEEEEcCCCceEeEEEEEEEeCCeEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCCCc
Q 002383 473 PPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPS 552 (929)
Q Consensus 473 ~~~~~~~~~~~~~~v~vfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (929)
|.++. ..+.+.|+|||||+|.++++|+|||+.++++|+|+.|++|++|++|.......+. .......
T Consensus 473 ~~t~~---~~~~~~v~~YNpLa~~~t~~VRiPV~~~~~~V~D~~G~~v~Sqivp~~~~~~al~----------~~~~~~~ 539 (996)
T KOG1959|consen 473 AFTKD---GADNFIVTLYNPLAHTVTQYVRIPVKEENYRVTDEKGRTVPSQIVPVPWQVLALE----------SRNNDTK 539 (996)
T ss_pred CCCcC---CcCcEEEEEEcCCcceeeeEEEEeccCCCeEEECCCCCCcccceeccchhhhhhh----------ccccCCC
Confidence 99863 3578999999999999999999999999999999999999999999876443321 1223467
Q ss_pred EEEEEEeecCCCceEEEEEEeCCcccCccccceeeeccccCCCceEEccCeEEEEEECCCCeEEEEEecCCCcEEEEEEE
Q 002383 553 YWLAFSASVPPLGFNTYIISSAKQAASHSGMRTVYKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQS 632 (929)
Q Consensus 553 ~~l~f~~~vPplG~~~y~i~~~~~~~~~~~~s~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~l~si~dk~~g~~~~~~~~ 632 (929)
++|+|.|.|||+|+++|.|+....+... +.+..............|+|+++++.||..+|.+++|....+|.+..+.|.
T Consensus 540 ~eLvf~asvpplg~aty~i~k~~~~~~~-~~~~~~~i~~~~~n~~~V~n~~~kl~fd~~tG~l~~v~~n~t~~t~~V~Q~ 618 (996)
T KOG1959|consen 540 HELVFKASVPPLGIATYFIKKVASTERG-SASHVRNIKKRESNATEVGNSHLKLVFDNDTGLLKTVEMNQTGVTENVDQE 618 (996)
T ss_pred ceEEEEEEecCccceEEEEeecCccccc-ccccccccccccCcceEeccceEEEEEcCCCCceEEEEecccCcceeeeee
Confidence 8999999999999999999965543221 001111111223344899999999999988899999998889999999999
Q ss_pred EEEeecCCCCCCCCCCcceEEccCCCCccCCC-CccEEEEEEcCceEEEEEEEcCeEEEEEEEecCCCceEEEEEECccc
Q 002383 633 YIYYRGDDGSKDLQPSGAYIFRPNGTYPIEPE-GQLSFTILRGPLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIP 711 (929)
Q Consensus 633 ~~~Y~~~~g~~~~~~sgaYiF~P~~~~~~~~~-~~~~i~v~~G~l~~~v~~~~~~~~~~~irLy~~~~~ie~e~~v~~~~ 711 (929)
|.+|.+..|+.+.+.||||+||| +..++++. ....++|+.|||+.||++.++.|++|++|+|+|.+++|+||.|+|||
T Consensus 619 f~~Y~~~~g~n~~q~SgAYiFRp-~~~~~~~~~~~vel~vv~G~LV~EVhQ~f~~wiSQviRvy~g~~~~E~Ew~VGpIp 697 (996)
T KOG1959|consen 619 FGYYKGYRGDNDKQASGAYIFRP-GQADIPIVSDQVELTVVDGPLVKEVHQQFNPWISQVIRVYEGKNHVEFEWLVGPIP 697 (996)
T ss_pred eEEEEeecCCcCCccCcceEecC-CCCCccccccceEEEEecCchHHHHHHHHHHHHhheeEecCCCcceEEEEEeccee
Confidence 99999988875569999999999 54444443 35788999999999999999999999999999999999999999999
Q ss_pred ccCCCCcEEEEEEEeeccCCCeEEEcCCCcceeeeccccccCcccccccccccceeeeeeeEEEEeccceeEEEeccccc
Q 002383 712 IDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVG 791 (929)
Q Consensus 712 ~~~~~~~ev~~~f~t~i~s~~~fyTDsnG~~~i~R~~~~r~~w~~~~~~pv~~NyYP~~s~~~I~D~~~~ltvl~dr~~G 791 (929)
++++.|||+++||+|+|.|+++|||||||+||+||.+++|++|.....+||+||||||++.|||+|++.||+|||||+||
T Consensus 698 ~~d~~gkEvVtr~~t~i~S~g~fYTDSNGRe~~kR~~d~r~~~~~~~~epiAGNYYPvt~~i~lqD~~~rl~vL~DRAqG 777 (996)
T KOG1959|consen 698 IDDGIGKEVVTRFSTEISSNGVFYTDSNGREMIKRVRDKREDFVLDVNEPIAGNYYPVTSRIYLQDSKKRLSVLNDRAQG 777 (996)
T ss_pred cCCCccceEEEEeccccccCceEEecCcHHHHHHHHhcccCCCccccCccccccccccceeeEEecCCceEEEEeecccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCeEEEEEEeeecccCCcCccccccccccccccccCeEEEeEEEEEeccccchh-hhcccchhhhccCceeeeec
Q 002383 792 GSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAA-KWRRSFGQEIYSPFLLAFTE 870 (929)
Q Consensus 792 ~ssl~~G~iElml~Rr~~~DD~rGvge~l~e~~~~~~~~~g~~~~~~~~l~~~~~~~~~-~~~r~~~~~~~~p~~~~~~~ 870 (929)
|+|++||+||||||||++.||+|||||+|||+.++ ..||+++|+|++.|++....+ ..+|..++++..|.+.+|++
T Consensus 778 gsSl~dG~lElMLHRRl~~DD~~Gv~EaLnEt~~~---~~gL~~rGk~~~~l~~~~d~a~~~~r~~~~ei~~P~~~~f~~ 854 (996)
T KOG1959|consen 778 GSSLKDGQLELMLHRRLLNDDGRGVGEALNETVYG---HAGLIARGKLYVLLDKAGDGATGWRRLAEQEIHLPLWKFFSK 854 (996)
T ss_pred CccccCCeEEEEeeehhhcccccccchhccccccc---ccceEEeeeEEEEEecccccchhhhhhhhhhcccHHHHHhhc
Confidence 99999999999999999999999999999999886 279999999999999888775 67888999999999999998
Q ss_pred cCCCccccccccccccCCcCCCCCCceeEEEeEecCCCcEEEEeeehhccccccccCCC
Q 002383 871 QDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDSGKILLRLAHLYERTQIYQLCQV 929 (929)
Q Consensus 871 ~~~~~~~~~~~~~~s~l~~~~~lP~~vhlltl~~~~~~~~llRl~h~~~~~e~~~~s~~ 929 (929)
.....+........+.+..+..||.+||||||++|+++.+||||+|+|++|||+++|+|
T Consensus 855 ~~~~~~~~~~s~~~~~f~~~~~lP~~vhLlTLe~~~~~~vLlRleh~~e~gED~~~s~v 913 (996)
T KOG1959|consen 855 PEGGEALNSLSIPGSAFSGSYDLPQSVHLLTLEEWSKDEVLLRLEHLYEVGEDSELSQV 913 (996)
T ss_pred CCCccchhhcCCCccccccccCCCcceeeeecccCCCCceEeeehhhhhcccccccCcc
Confidence 77655544332222223323589999999999999999999999999999999999987
No 2
>PLN02701 alpha-mannosidase
Probab=100.00 E-value=1.4e-179 Score=1634.33 Aligned_cols=838 Identities=28% Similarity=0.498 Sum_probs=716.8
Q ss_pred cceeeEecCCCCCCCCceEEEEEecccCCCccchhhhheeecCCcchhhHHHHHHHHHHHHHHHhCCCCeEEEechhHHH
Q 002383 19 ESKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQ 98 (929)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~VhlVpHSH~D~gWl~T~~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~~kF~~~e~~~~~ 98 (929)
+.-.|.|+...+. +++++||||||||||+||||||+|||. +.+++||++||+.|++||+|||+|+|++||+
T Consensus 24 qg~~~~y~~~~~~-~~~l~VhlVpHSH~D~gWl~T~~eyy~--------~~~~~ild~vv~~L~~dp~rkFi~~E~~fl~ 94 (1050)
T PLN02701 24 QGWRVKYRGDEWD-REKLKVFVVPHSHNDPGWILTVEEYYQ--------EQSRHILDTIVESLSKDPRRKFIWEEMSYLE 94 (1050)
T ss_pred cccceeecccccC-CcceEEEEeCCCCCCHHHcCcHHHHHH--------HHHHHHHHHHHHHHHhCcCcceeeccHHHHH
Confidence 5556778877664 788999999999999999999999997 8999999999999999999999999999999
Q ss_pred HHHhccChHHHHHHHHHHHcCCEEEEcceeeecccCCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHH
Q 002383 99 RWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYL 178 (929)
Q Consensus 99 ~ww~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~I~ql~~G~~~l~~~fG~~p~v~W~iD~FGhs~~~p~l 178 (929)
+||++++|+++++||+||++||||||||||||+|||++|||+|||||++||+|++++||+.|++||+|||||||++||||
T Consensus 95 ~Ww~~~~pe~~~~vk~LV~~GrLE~vgGgwvm~DEa~~~~esiI~Ql~~G~~~l~~~fG~~P~~~W~iDpFGhs~~~P~L 174 (1050)
T PLN02701 95 RWWRDASPSKKEAFTKLVKNGQLEIVGGGWVMNDEANSHYFAIIEQITEGNMWLNDTIGVAPKNSWAIDPFGYSSTMAYL 174 (1050)
T ss_pred HHHHhcCHHHHHHHHHHHHcCCEEEECCceecccccccCHHHHHHHHHhhhHHHHhhcCCCCCcCccCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCcEEEEeecChHhHHHhhhcCceeEEEeeCCCCCCCCceeeeeCCC-CCC-----CCCCCCC--cccCC-----
Q 002383 179 LSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPK-NYE-----PPSDNFY--FEVGD----- 245 (929)
Q Consensus 179 l~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~~~d~~~~gs~i~th~~~~-~Y~-----~p~~~f~--f~~~~----- 245 (929)
| ++|||++++|+|++|++|+.|..++.+||+|+++++..+|++||||+||+ +|+ .||++|| ||..+
T Consensus 175 l-~~~G~~~~~~~R~~y~~k~~~~~~~~~eF~W~~s~~~~dgs~Ift~~lp~y~Y~~p~~~~p~p~~c~~Fd~~~~~~~~ 253 (1050)
T PLN02701 175 L-RRMGFENMLIQRTHYEVKKELAQNKNLEYIWRQSWDAEETTDIFVHMMPFYSYDIPHTCGPEPAICCQFDFARMRGFQ 253 (1050)
T ss_pred H-HhCCCceEEEeccchHHHHHHhhcCCceEEEeCCCCCCCCCEEEEEEccccccCcccccCCCcccccccccccccccc
Confidence 9 99999999999999999999999999999999988777799999999995 553 3336776 55442
Q ss_pred -CCCCccCC-ccccCCChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCC---cchHHHHHHHHHHHHHHhcCC--Cee
Q 002383 246 -TSPIVQDD-MNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKY---QYAHTWFRQMDKFIHYVNQDG--RVN 318 (929)
Q Consensus 246 -~~~p~~~~-~~i~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y---~~a~~~~~n~~~li~~~N~~~--~~~ 318 (929)
..|||.++ +.++++|+++||+.|++++++++..|+++++|+|+||||+| .+|..||+||++||+++|+++ .++
T Consensus 254 ~~~cp~~~~p~~~~~~nv~~r~~~~~~~~~~~s~~~rtn~iL~p~GdDf~~~~~~~a~~~f~n~dkli~~iN~~~~~~~~ 333 (1050)
T PLN02701 254 YELCPWGKHPVETNDENVQERAMKLLDQYRKKSTLYRTNTLLVPLGDDFRYISIDEAEAQFRNYQKLFDYINSNPSLKAE 333 (1050)
T ss_pred cccCcccCCccccchhHHHHHHHHHHHHHHHhhccccCCeEEEecCCCCCCcchhHHHHHHHhHHHHHHHHhhCcccCce
Confidence 12454444 46889999999999999999999999999999999999999 468899999999999999874 499
Q ss_pred EEEcChhhHHHHHHhcC----------------CCCCCcccCCccccccCCCceeeeeccchhhhHHHHHHhHHHHHHHH
Q 002383 319 ALYSTPSMYIDAKYAAN----------------ESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQ 382 (929)
Q Consensus 319 i~~sT~~~Yf~al~~~~----------------~~~p~~~gDffpy~~~~~~yWtGyyTSRp~~K~~~R~~e~~L~~ae~ 382 (929)
++||||++||++++++. ..||+++||||||+++.++||||||||||.+|+++|++|++|++||+
T Consensus 334 i~~ST~~~Yf~~l~~~~~~~~~~~~ge~~~~~~~~~p~~~gDff~Ya~~~~~yWTGyyTSRp~lK~~~R~~e~~L~~aE~ 413 (1050)
T PLN02701 334 VKFGTLEDYFSTLRDEADRINYSRPGEVGSGEVPGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRAAEI 413 (1050)
T ss_pred EEECCHHHHHHHHHhhhccccccccccccccccCCCceecccccccccccccccceeeecHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998753 57999999999999999999999999999999999999999999999
Q ss_pred HHhhhc--------cccC---CCchHHHHHHHHhhhccccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 002383 383 LEFFKG--------RNEV---GLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSK 451 (929)
Q Consensus 383 l~~l~~--------~~~~---~~~~~~l~~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~ 451 (929)
|++++. ..++ .+.++.+|++|+++||||||||||+++|++||..||.+|+..++.+++.+++.|+....
T Consensus 414 L~sla~~~~~~~~~~~~~~~~~~~L~~~wk~l~~~QhHDaItGTsk~~V~~Dy~~rl~~~~~~~~~~~~~al~~L~~~~~ 493 (1050)
T PLN02701 414 LFSFLLGYCRRFQCEKLPTSFSYKLTAARRNLALFQHHDGVTGTAKDHVVVDYGTRMHTSLQDLQIFMSAAVEVLLGIRH 493 (1050)
T ss_pred HHHHHhhhhhhccccCCChhhHHHHHHHHHHHHhhccCcCcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999842 2233 24578999999999999999999999999999999999999999999999999987432
Q ss_pred CCCCCCCccccccc-ccccccCCCCcc-ccCCCceEEEEEEcCCCceEeEEEEEEEeCCeEEEEcCCCCEEEEEEeeccc
Q 002383 452 NGCVNPITNFQQCP-LLNISYCPPSEV-DLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLK 529 (929)
Q Consensus 452 ~~~~~~~~~~~~~~-~ln~s~~~~~~~-~~~~~~~~~v~vfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~ 529 (929)
..+..+...|+.|. .+|++.||.+.. .+..++...|+|||||+|+|+++|+|+|+.+.+.|+|++|++|++|+++.+.
T Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpL~~~r~~vV~v~V~~~~~~V~d~~g~~v~~Qi~~~~~ 573 (1050)
T PLN02701 494 EKSDQTPSWFEPEQSRSKYDMLPVHKVINLREGKAHRVVFFNPLEQTREEVVMVVVDRPAVCVFDSNWTCVPSQISPEWQ 573 (1050)
T ss_pred cccccccccccccccccccccccccccccccCCCceEEEEECCCCceeeEEEEEEecCCcEEEEcCCCCEEeEEEecccc
Confidence 22222334577784 458999997742 1234566899999999999999999999999999999999999999998754
Q ss_pred ccccccccccccccCCCCCCCCcEEEEEEeecCCCceEEEEEEeCCcccCcccccee--------------eeccccCCC
Q 002383 530 DSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTV--------------YKSQIRQND 595 (929)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vPplG~~~y~i~~~~~~~~~~~~s~~--------------~~~~~~~~~ 595 (929)
.... ......|+|.|.++||||||++|.|............+++ ........+
T Consensus 574 ~~~~-------------~~~~~~~~l~F~a~vPplG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (1050)
T PLN02701 574 HDGE-------------KLFTGRHRLYWKASVPALGLETYFIANGNVSCEKAVPAKLKVFNSDDKFPCPEPYSCSKLEGD 640 (1050)
T ss_pred cccc-------------ccccceEEEEEEEecCCceeEEEEEEEcCCCcccccccccccccccccccccccccccccCCC
Confidence 2110 0123568999999999999999999875322110000000 000011234
Q ss_pred ceEEccCeEEEEEECCCCeEEEEEecCCCcEEEEEEEEEEeecCCCCCCCCCCcceEEccCCCC-ccCCCCccEEEEEEc
Q 002383 596 TIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTY-PIEPEGQLSFTILRG 674 (929)
Q Consensus 596 ~~~ieN~~~~v~~~~~~G~l~si~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sgaYiF~P~~~~-~~~~~~~~~i~v~~G 674 (929)
.+.|||++++|+||+.+|.|++|++|++|++..++++|.+|.+ +.||||+|+|++.+ +.. .....+.+++|
T Consensus 641 ~~~ieN~~lkl~Fd~~TG~L~si~~~~~g~~~~v~q~f~~Y~s-------~~SGAYiFrP~~~~~p~~-~~~~~~~v~~G 712 (1050)
T PLN02701 641 TVEISNSHQTLGFDVKTGLLRKIKIHKNGSETVVGEEIGMYSS-------QGSGAYLFKPDGEAQPIV-QAGGLVVVSEG 712 (1050)
T ss_pred cEEEecCeEEEEEcCCCCceeEEEecccCceecceeeeeeecC-------CCCcceEEcCCCCCcccC-CCCceEEEEeC
Confidence 5899999999999999999999999999999999999999963 45799999998875 332 22234568999
Q ss_pred CceEEEEEEE-----cCeEEEEEEEecC-----CCceEEEEEECcccccCCCCcEEEEEEEeeccCCCeEEEcCCCccee
Q 002383 675 PLLDEVHQRI-----NPWIYQVTRVYKG-----KDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFI 744 (929)
Q Consensus 675 ~l~~~v~~~~-----~~~~~~~irLy~~-----~~~ie~e~~v~~~~~~~~~~~ev~~~f~t~i~s~~~fyTDsnG~~~i 744 (929)
|++++|++.+ +++++|++|||++ ...+|++++||+||. +..|+|++|||+|+|+|+++||||||||||+
T Consensus 713 plv~eV~~~~~~~~~~s~isQ~iRLY~~~~~~~~~~vE~e~~V~~ip~-d~~~kEii~R~~T~i~s~~~FYTDsNG~qm~ 791 (1050)
T PLN02701 713 PLVQEVHSVPKTKWEKSPLSRSTRLYHGGKSVQDLSVEKEYHVELLGH-DFNDKELIVRFKTDIDNKRVFYSDLNGFQMS 791 (1050)
T ss_pred CEEEEEEEEeecccCCcceEEEEEEecCCCccccceEEEEEEecCccc-CCCCcEEEEEEeecccCCCeEEEcCccceee
Confidence 9999999976 4789999999998 678999999999986 6789999999999999999999999999999
Q ss_pred eeccccccCcccccccccccceeeeeeeEEEEe-ccceeEEEeccccccccccCCeEEEEEEeeecccCCcCcccccccc
Q 002383 745 ERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKD-NSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNET 823 (929)
Q Consensus 745 ~R~~~~r~~w~~~~~~pv~~NyYP~~s~~~I~D-~~~~ltvl~dr~~G~ssl~~G~iElml~Rr~~~DD~rGvge~l~e~ 823 (929)
||+ +|+ ++|++||||||+++|||+| ++.||||+|||++||||+++|+|||||||||++||+|||||||||+
T Consensus 792 kR~-----~~~---~~Pv~gNYYPv~s~a~IqD~~~~rltvltdrs~G~sSl~~GqLEiMLhRRLl~DD~rGvge~l~dn 863 (1050)
T PLN02701 792 RRE-----TYD---KIPLQGNYYPMPSLAFLQGSNGQRFSVHSRQSLGVASLKNGWLEIMLDRRLVQDDGRGLGQGVMDN 863 (1050)
T ss_pred eec-----ccc---cCccccccccccceEEEEcCCCCeEEEEeccCcccccCCCcEEEEEEEeecccccCcccccccccc
Confidence 997 343 6999999999999999999 6689999999999999999999999999999999999999999997
Q ss_pred ccccccccCeEEEeEEEEEeccccchhh------------hcccchhhhccCceeeeeccCCCccccccc--cccccCCc
Q 002383 824 VCVFDKCEGLTIIGKYYLRIDPVGEAAK------------WRRSFGQEIYSPFLLAFTEQDGDHWANSHL--ATYSAMDT 889 (929)
Q Consensus 824 ~~~~~~~~g~~~~~~~~l~~~~~~~~~~------------~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~s~l~~ 889 (929)
.++..+|+|+||+...... ..+..+..|++|+++|++....+. ..... .+|++|.+
T Consensus 864 ---------k~~~~~f~ll~e~~~~~~~~~~~~~~~~~Sl~sh~~~~~l~~p~~~~~~~~~~~~-~~~~~~~~~~~~l~~ 933 (1050)
T PLN02701 864 ---------RPMNVVFHLLLESNISSSPPASNPLPLQPSLLSHRVGAHLNYPMHAFLAKKPQAT-SVENPQDTSFAPLAK 933 (1050)
T ss_pred ---------ccccceEEEEEecccccCCCCCCCCcCCccHHHHHHHHhhcCCchhhcccCcccc-ccccccccccccccC
Confidence 4688999999997654210 112357889999998885433221 11222 67889876
Q ss_pred CCCCCCceeEEEeEecCCC
Q 002383 890 TYVLPDNVALITLQELDSG 908 (929)
Q Consensus 890 ~~~lP~~vhlltl~~~~~~ 908 (929)
+|||||||||||++++.
T Consensus 934 --~lpcD~hlv~lrt~~~~ 950 (1050)
T PLN02701 934 --PLPCDLHIVNFKVPRPS 950 (1050)
T ss_pred --CCCCcEEEEEeeccCCc
Confidence 99999999999988765
No 3
>KOG1958 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-165 Score=1387.99 Aligned_cols=839 Identities=30% Similarity=0.491 Sum_probs=703.2
Q ss_pred cceeeEecCCCCCCCCceEEEEEecccCCCccchhhhheeecCCcchhhHHHHHHHHHHHHHHHhCCCCeEEEechhHHH
Q 002383 19 ESKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQ 98 (929)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~VhlVpHSH~D~gWl~T~~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~~kF~~~e~~~~~ 98 (929)
+.-.|.|+...+....+++|+||||||+||||++||++||+ .+.++||++++..|.++|++||||+|++||.
T Consensus 146 qG~~i~yd~~~~~~~~~LkvfVvPHSHnDPGW~~Tf~~Yy~--------~~tr~Il~~~v~~L~e~~~~~FIwaEiS~~~ 217 (1129)
T KOG1958|consen 146 QGFKITYDPKKWDKEPFLKVFVVPHSHNDPGWIKTFEEYYQ--------RQTRHILNNMVNKLSEDPRMKFIWAEISFLE 217 (1129)
T ss_pred cCceeecChhhcccccceEEEEeeccCCCcchhhhHHHHHH--------HHHHHHHHHHHHHhhhCcccchhhhhHHHHH
Confidence 45567798888877777999999999999999999999998 8899999999999999999999999999999
Q ss_pred HHHhccChHHHHHHHHHHHcCCEEEEcceeeecccCCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHH
Q 002383 99 RWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYL 178 (929)
Q Consensus 99 ~ww~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~I~ql~~G~~~l~~~fG~~p~v~W~iD~FGhs~~~p~l 178 (929)
+||+.++|+.|++||.||++||||||+|||||||||.+||.++|+|+++||+||..++|++|+++|.|||||||++||+|
T Consensus 218 ~ww~~~~~~kk~a~k~lv~~GqlEIvtGGWVMpDEAn~Hy~~~i~qliEGh~Wl~~~igv~P~s~WaiDPFG~S~TmpYL 297 (1129)
T KOG1958|consen 218 RWWDDASPTKKNAVKRLVKNGQLEIVTGGWVMPDEANSHYFAMIDQLIEGHQWLKNNIGVTPQSGWAIDPFGYSSTMPYL 297 (1129)
T ss_pred HhhhhcChHHHHHHHHHHhcCcEEEEeCccccCcccchhHHHHHHHHhhhhhHHhccCCCCCCcccccCCCCCCcchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCcEEEEeecChHhHHHhhhcCceeEEEeeCCCCCCCCceeeeeCCC-CCCCC---------CCCCCcccCCC--
Q 002383 179 LSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPK-NYEPP---------SDNFYFEVGDT-- 246 (929)
Q Consensus 179 l~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~~~d~~~~gs~i~th~~~~-~Y~~p---------~~~f~f~~~~~-- 246 (929)
| +++||++++|+|+||..|+.++.+|++||+||+.|+..+.++||||+||+ +|+.| +|+|||.+++.
T Consensus 298 L-~~ag~~~mlIQRvHYavKk~lA~qk~leF~WRQ~wds~~~tDl~tHmMPFysYDIphTCGPdP~ICCqFDFkRmpg~~ 376 (1129)
T KOG1958|consen 298 L-RRAGFENMLIQRVHYAVKKELAQQKSLEFIWRQYWDSTGDTDLLTHMMPFYSYDIPHTCGPDPKICCQFDFKRMPGGG 376 (1129)
T ss_pred H-hhcCchhHHHHHHHHHHHHHHHHhcccceeehhhccCCCCcchheeecccccccCCCccCCCCceeeeeecccCCCCC
Confidence 9 89999999999999999999999999999999999998899999999998 88766 37999999742
Q ss_pred -CCCc-cCCccccCCChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCcchHHH---HHHHHHHHHHHhcCC--CeeE
Q 002383 247 -SPIV-QDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTW---FRQMDKFIHYVNQDG--RVNA 319 (929)
Q Consensus 247 -~~p~-~~~~~i~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~---~~n~~~li~~~N~~~--~~~i 319 (929)
.||| +.+..|++.||++||+.+++||+++++.|++|.+|+|.||||+|....|| |.|+.+|+++||+.+ ++++
T Consensus 377 ~~Cpw~vpP~~It~~NVa~rA~~LldQyrKkS~Lfr~nVlLiPlGDDFRy~~~~Ewd~Q~~NY~~LFD~iNs~~~~nv~a 456 (1129)
T KOG1958|consen 377 CECPWGVPPEKITDANVAARAELLLDQYRKKSELFRTNVLLIPLGDDFRYDKITEWDQQFDNYQKLFDHINSRPLLNVQA 456 (1129)
T ss_pred cCCCCCCCCeeechhhHHHHHHHHHHHHHHHhhhcccceEEEecCCccccCccHHHHHHHHHHHHHHHHHhcccccceee
Confidence 3455 56668999999999999999999999999999999999999999988877 999999999999864 6889
Q ss_pred EEcChhhHHHHHHhc----C---CCCCCcccCCccccccCCCceeeeeccchhhhHHHHHHhHHHHHHHHHHhhhc----
Q 002383 320 LYSTPSMYIDAKYAA----N---ESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKG---- 388 (929)
Q Consensus 320 ~~sT~~~Yf~al~~~----~---~~~p~~~gDffpy~~~~~~yWtGyyTSRp~~K~~~R~~e~~L~~ae~l~~l~~---- 388 (929)
+|+|++|||+||++. + ..+|+++||||+|+|+.++||||||||||++|++.|.+|++||+||++++||.
T Consensus 457 qFGTlsDYF~al~k~~~e~~kg~~~FPtlSGDFFtYaDr~d~YWSGYyTSRPFyK~ldRvLeh~lR~AEIl~s~a~~~~~ 536 (1129)
T KOG1958|consen 457 QFGTLSDYFDALDKAYSERGKGQEPFPTLSGDFFTYADRDDHYWSGYYTSRPFYKRLDRVLEHYLRSAEILFSLALAHAH 536 (1129)
T ss_pred ecCCHHHHHHHHHHhhccccCCCCCCcccccCceeeecccCccceeeeecchHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999999999999865 1 34799999999999999999999999999999999999999999999998642
Q ss_pred ---cc--cCC---CchHHHHHHHHhhhccccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-CCCCCCCc
Q 002383 389 ---RN--EVG---LSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSK-NGCVNPIT 459 (929)
Q Consensus 389 ---~~--~~~---~~~~~l~~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~-~~~~~~~~ 459 (929)
.. .+. ..+..|||+|+++|||||||||||++|+.||..||..++..++.++.+++..|+.... +....+.-
T Consensus 537 r~~~~~r~~~~~~~~L~~ARRnL~LFQHHDaITGTaK~~Vv~DYg~rl~~Sl~~~~~v~~~~~~~Ll~~~~~~y~~~~~~ 616 (1129)
T KOG1958|consen 537 RVGLAQRIEESNYELLTAARRNLGLFQHHDAITGTAKDAVVVDYGQRLHESLVNLQIVLENALELLLGKDSETYNSDPSH 616 (1129)
T ss_pred HhhhhhhcchhHHHHHHHHHHhhhhhhcccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCCC
Confidence 11 111 2467899999999999999999999999999999999999999999999999987532 22222221
Q ss_pred cccccccc--ccccCCC-CccccCCCceEEEEEEcCCCceEeEEEEEEEeCCeEEEEcCCCCEEEEEEeecccccccccc
Q 002383 460 NFQQCPLL--NISYCPP-SEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRN 536 (929)
Q Consensus 460 ~~~~~~~l--n~s~~~~-~~~~~~~~~~~~v~vfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~ 536 (929)
.+-+.... +.+.-|. +-..+ +..+..|++||||.++|.++|+|.|+.+.|.|.+..|++|++|+.|+|..+...
T Consensus 617 ~~~emd~~r~~~~~~pek~~~~~-~~~~~~vvlfN~l~q~R~evv~i~V~sp~V~V~~d~g~pv~~Qispvw~~~~tk-- 693 (1129)
T KOG1958|consen 617 SFIEMDDIRDSEDSLPEKTVIGL-SSGPRSVVLFNPLEQEREEVVTIRVNSPEVSVLDDGGVPVEAQISPVWQDTKTK-- 693 (1129)
T ss_pred CceehhhcccCCCcCcccceeec-cCCCceEEEeccchhhhhccEEEEecCCeeEEEcCCCceeeEeeccceeccccc--
Confidence 11111000 1111111 00112 234478999999999999999999999999999999999999999999632110
Q ss_pred cccccccCCCCCCCCcEEEEEEeecCCCceEEEEEEeCCcccCccccc---e-----eeec--cccCCCceEEccCeEEE
Q 002383 537 SYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGMR---T-----VYKS--QIRQNDTIEVGPGNLKL 606 (929)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~l~f~~~vPplG~~~y~i~~~~~~~~~~~~s---~-----~~~~--~~~~~~~~~ieN~~~~v 606 (929)
......|+|+|.++|||||..+|++..+..+......+ + +... .....+...++|++.++
T Consensus 694 ----------~~~~~~~~l~f~a~vpplgl~v~~~~~~~~~~~~~l~s~~~~~~~~~~~s~~~~~~~~~~s~~~~~~~~l 763 (1129)
T KOG1958|consen 694 ----------TIKPGSYRLSFKATVPPLGLMVLRIDSGGLTEHAKLPSKDTSFPAWDLGSSSTIGDSRELSTLRNEYFEL 763 (1129)
T ss_pred ----------eeecceeEEEEEEecccceeeEEEeeccCcccccccccCCCCcccCCCccceeecCccccceeeccceeE
Confidence 01124799999999999999999998763321111000 0 0000 01112345899999999
Q ss_pred EEECCCCeEEEEEecCCCcEEEEEEEEEEeecCCCCCCCCCCcceEEccCCCC-ccCCCCccEEEEEEcCceEEEEEEEc
Q 002383 607 LYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTY-PIEPEGQLSFTILRGPLLDEVHQRIN 685 (929)
Q Consensus 607 ~~~~~~G~l~si~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sgaYiF~P~~~~-~~~~~~~~~i~v~~G~l~~~v~~~~~ 685 (929)
.||+++|+|+++..+.++....+...|..|.+..+ +..||||+|.|+|++ ++.......|.+ +|+|+++|.+...
T Consensus 764 ~fd~~~G~i~~~~~~~D~~~~~~q~~f~~y~~~~~---~~~sgaylf~p~G~a~~~i~~~~p~v~v-~g~L~qev~~~~~ 839 (1129)
T KOG1958|consen 764 RFDPETGTIKSINSLSDNKHFESQVSFSNYGERIS---GDESGAYLFLPDGNAKPIIELQWPHVRV-KGPLVQEVSQFLK 839 (1129)
T ss_pred EeccccchhhhhhhcccCCCcccceeecccccccc---CCCCceEEEccCCCCCCceecCCCeEEe-ecceeeeeccccc
Confidence 99999999999988888888888888988865544 567999999999985 544444456666 9999999988764
Q ss_pred C---eEEEEEEEecCCCceEEEEEECcccccCCCCcEEEEEEEeeccCCCeEEEcCCCcceeeeccccccCccccccccc
Q 002383 686 P---WIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPI 762 (929)
Q Consensus 686 ~---~~~~~irLy~~~~~ie~e~~v~~~~~~~~~~~ev~~~f~t~i~s~~~fyTDsnG~~~i~R~~~~r~~w~~~~~~pv 762 (929)
. ...|.+|+|.|. .+|++..|+ +.+..+.|++|||+|++++++.||||+||+||+||.+. .+.|+
T Consensus 840 ~v~~~~~~~~~~~~G~-~vei~~~vd---i~~~~n~Ela~R~st~vds~~~FyTDlnG~Q~~kR~~~--------~KlPl 907 (1129)
T KOG1958|consen 840 NVLHRLSQNVRGYSGE-EVEISNSVD---IRKEDNTELAMRFSTDVDSGDLFYTDLNGMQMIKRRRL--------DKLPL 907 (1129)
T ss_pred hHHHhchhheeccCCc-ceeeeceee---cccccchhhhhhhhhcccCCceeeeccchhhhhhhhhc--------ccCcc
Confidence 3 233788999887 677777764 55568999999999999999999999999999999865 47999
Q ss_pred ccceeeeeeeEEEEeccceeEEEeccccccccccCCeEEEEEEeeecccCCcCccccccccccccccccCeEEEeEEEEE
Q 002383 763 AGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLR 842 (929)
Q Consensus 763 ~~NyYP~~s~~~I~D~~~~ltvl~dr~~G~ssl~~G~iElml~Rr~~~DD~rGvge~l~e~~~~~~~~~g~~~~~~~~l~ 842 (929)
++|||||++++||+|.+.+|++++.+++|++|+.+|+||||++||+.+||+||||+|+.|+ .++..+|+|+
T Consensus 908 QaNyYPmpt~a~Iq~~~~RlsihS~q~lGvssL~sG~iEIm~DRrL~~DD~rGLgqGv~DN---------k~t~~~frlv 978 (1129)
T KOG1958|consen 908 QANYYPMPTAAFIQDAKQRLSIHSAQSLGVSSLESGQIEIMLDRRLNQDDGRGLGQGVIDN---------KPTDMKFRLV 978 (1129)
T ss_pred cceeecccceeeeecCCceEEEEeecccCccccccceEEEEecccccCCCCcccccccccc---------chhhheeeee
Confidence 9999999999999999999999999999999999999999999999999999999999886 4678899999
Q ss_pred eccccchhhh------------cccchhhhccCceeeeeccCCCccccccccccccCCcCCCCCCceeEEEeEecCCCc
Q 002383 843 IDPVGEAAKW------------RRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDSGK 909 (929)
Q Consensus 843 ~~~~~~~~~~------------~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~s~l~~~~~lP~~vhlltl~~~~~~~ 909 (929)
+++.+.++.. .+...+.+++|++.|+..... +... ...+.++.. +||||+||+|||++.+++
T Consensus 979 ~e~~~s~~~p~e~~~~~~ps~~ah~a~~~l~yP~~~f~~~~pk--~i~~-~g~~~~~~~--~lpcDl~lvt~rtl~~~~ 1052 (1129)
T KOG1958|consen 979 LESLNSAQDPTENSRVSYPSLAAHLASQSLNYPLMKFIYAEPK--KIED-QGIFEPLNL--SLPCDLHLVTFRTLESSK 1052 (1129)
T ss_pred ecccccccCchhcCCCCChhhhhhcccceecCCchhhcccCCC--Chhh-ccccccccC--CCccceeEEEeeeccCcc
Confidence 9988753321 123567889999988743322 1221 233566654 899999999999998664
No 4
>PRK09819 alpha-mannosidase; Provisional
Probab=100.00 E-value=9.4e-105 Score=983.55 Aligned_cols=771 Identities=15% Similarity=0.175 Sum_probs=587.3
Q ss_pred ceEEEEEecccCCCccchhhhheeecCCcchhhHHHHHHHHHHHHHHHhCCCCeEEE-echhHHHHHHhccChHHHHHHH
Q 002383 35 KINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIY-VEQAFFQRWWRDQSEEVQNVVK 113 (929)
Q Consensus 35 ~~~VhlVpHSH~D~gWl~T~~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~~kF~~-~e~~~~~~ww~~~~p~~~~~vk 113 (929)
+++||+|||||||+|||||++++. .++.++|++|++.|+++|+++|.+ +++..+.+||.+..|+++++||
T Consensus 3 ~~~v~~v~HtH~D~~Wl~~~~~~~---------~~~~~~~~~vl~lle~~p~~~f~~~d~q~~~l~~~~~~~Pe~~~~ik 73 (875)
T PRK09819 3 KSKVHIVPHMHWDREWYFTTERSR---------ILLVNNMEEILDRLEQDNDYKYYVLDGQTSLLEDYLAVKPEDKERVK 73 (875)
T ss_pred ceEEEEeCCCCCChhhcCChHHhH---------HHHHHHHHHHHHHHHhCCCcceEEEchhHHHHHHHHHhChHHHHHHH
Confidence 478999999999999999999986 678899999999999999999754 4454455666688999999999
Q ss_pred HHHHcCCEEEEcceeeecccCCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHHHHhhcCCcEEEEeec
Q 002383 114 QLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARI 193 (929)
Q Consensus 114 ~lV~~GrlE~vgGgwv~~Dea~~~~es~I~ql~~G~~~l~~~fG~~p~v~W~iD~FGhs~~~p~ll~~~~G~~~~~~~Ri 193 (929)
+||++||| ++||||||+||+++|+||+||||++|++|+ ++||..|++||+|||||||++||||| ++|||+++++||+
T Consensus 74 ~lV~~Grl-~~G~W~v~~D~~l~sgEsliRqll~G~~~~-~~fG~~~~vgwlpD~FG~s~~lPqIl-~~~Gi~~~~~wr~ 150 (875)
T PRK09819 74 KLVQAGKL-IIGPWYTQTDQLVVSGESIVRNLLYGIRDC-REFGEPMKIGYLPDSFGQSGQMPQIY-NGFGITRTLFWRG 150 (875)
T ss_pred HHHHcCCE-eECcEEeecccccCCHHHHHHHHHHHHHHH-HHcCCCCceeeecCCCCCcHHHHHHH-HhCCCCeEEEEec
Confidence 99999999 677766999999999999999999999998 79999999999999999999999999 9999999999997
Q ss_pred ChHhHHHhhhcCceeEEEeeCCCCCCCCceeeeeCCCCCCCCCCCCCcccCCCCCCccCCccccCCChHHHHHHHHHHHH
Q 002383 194 DYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAI 273 (929)
Q Consensus 194 ~~~~k~~~~~~~~~eF~W~~~d~~~~gs~i~th~~~~~Y~~p~~~f~f~~~~~~~p~~~~~~i~~~nv~~~~~~~~~~~~ 273 (929)
..+ +...+..+|+|+|+| ||+||||++|.+|+.+ ..+ | ....+++++++.+++.++
T Consensus 151 ~~~----~~~~~~~~F~W~g~D----Gs~V~t~~~~~~Y~~g-~~~---------~------~~~~~~~~~~~~~~~~~~ 206 (875)
T PRK09819 151 VSD----RHGTDKTEFLWQSDD----GSEVLAQQLPLGYAIG-KYL---------P------EDEEELKKRLDEYFGVLE 206 (875)
T ss_pred ccc----cccCCCceEEEECCC----CCeEEEEECccccccC-CCC---------C------cCHHHHHHHHHHHHHHHh
Confidence 532 111246799999999 9999999999999865 111 0 122467777777777665
Q ss_pred HHhhhcCCCeEEEeccCCCCCcchHHHHHHHHHHHHHHhcC-CCeeEEEcChhhHHHHHHhcCCCCCCcccCCc-ccccc
Q 002383 274 AQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQD-GRVNALYSTPSMYIDAKYAANESWPLKTDDFF-PYADR 351 (929)
Q Consensus 274 ~~~~~~~t~~il~~~G~Df~y~~a~~~~~n~~~li~~~N~~-~~~~i~~sT~~~Yf~al~~~~~~~p~~~gDff-py~~~ 351 (929)
++ ..++++|+|+|+|+.+.. ++|.++|+.+|+. +.+++++||+++||++++++...||+++|||+ |+..+
T Consensus 207 ~~---~~~~~~l~~~G~d~~p~~-----~~~~e~i~~~~~~~~~~~~~~st~~~yf~~l~~~~~~lp~~~GEl~~~~y~~ 278 (875)
T PRK09819 207 KK---SSTKNILLPNGHDQMPLQ-----KNLFEVMDKLNEIYPEREFVISRFENVFEKLEKQRDNLPTLKGEFIDGKYMR 278 (875)
T ss_pred hc---CCCCcEEEecCCCCCccc-----ccHHHHHHHHHhhCCCCcEEECCHHHHHHHHHhhcCCCCeeeeecCCCcccc
Confidence 54 578999999999997765 5788888888875 46899999999999999987788999999998 43333
Q ss_pred CCCceeeeeccchhhhHHHHHHhHHHHH-HHHHHhhh---ccccCCCchHHHHHHHHhhhccccccCCcccchhHHHHHH
Q 002383 352 ENAYWTGYFTSRPALKGYVRTMSAYYLA-ARQLEFFK---GRNEVGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKR 427 (929)
Q Consensus 352 ~~~yWtGyyTSRp~~K~~~R~~e~~L~~-ae~l~~l~---~~~~~~~~~~~l~~~l~~~QhHDaItGTs~~~V~~dy~~r 427 (929)
.| +||||||+.+|++||++|++|+. +|.|.+++ |..|+...++++|+.|+++||||+||||++++|++|+..|
T Consensus 279 ~H---rG~~TSr~~iK~~nr~~E~~L~~~~E~l~~la~~~g~~yp~~~l~~~Wk~ll~nq~HD~i~G~sid~V~~d~~~r 355 (875)
T PRK09819 279 VH---RSIFSTRMDIKIANARIENKIVNVLEPLASIAYSLGFEYPHGLLEKIWKEMFKNHAHDSIGCCCSDTVHRDIVAR 355 (875)
T ss_pred cc---CCccccHHHHHHHHHHHHHHHHHHhchHHHHHHHcCCCCCHHHHHHHHHHHHHhcCCCcccccCChHHHHHHHHH
Confidence 23 69999999999999999999974 89998886 4567778899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccCCCCCCCcccccccccccccCCCCccccCCCceEEEEEEcCCCceEeEEEEEEEe-
Q 002383 428 LSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPVI- 506 (929)
Q Consensus 428 l~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~ln~s~~~~~~~~~~~~~~~~v~vfNpl~~~r~~~V~i~v~- 506 (929)
+.++.+.++++++.+++.|+.... .++...++|||||+|+|+++|++++.
T Consensus 356 ~~~~~~~~~~l~~~~l~~l~~~i~-----------------------------~~~~~~~~vfN~l~~~r~~~v~i~~~~ 406 (875)
T PRK09819 356 YKLAEDLADNLLDFYMRKIADNMP-----------------------------QSDADKLTVFNLLPYEREEVINTTVYL 406 (875)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-----------------------------cCCCCEEEEEcCCCccceeEEEEEEEe
Confidence 999999999999999999886421 13346899999999999999998774
Q ss_pred -CCeEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCCCcEEEEEEe-ecCCCceEEEEEEeCCcccCccccc
Q 002383 507 -NENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSA-SVPPLGFNTYIISSAKQAASHSGMR 584 (929)
Q Consensus 507 -~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~-~vPplG~~~y~i~~~~~~~~~~~~s 584 (929)
...+.+.|.+|+++++|+...................+. .....+.+.|.+ +||||||++|.+...+......
T Consensus 407 ~~~~~~~~d~~g~~v~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~f~~~~vP~lG~~~~~i~~~~~~~~~~--- 481 (875)
T PRK09819 407 PASQFTLRDDRGNPLPYTIREKRDIDPGLLDRQIVHYGNY--DPFMEFDIQINVQILPAMGYRTLYIELNEEGNVIE--- 481 (875)
T ss_pred ccCCEEEECCCCCEeeEEEeeccccccchhhcceeccCCC--CceEEEEEEEEECCCCCcccEEEEEEeCCcccccc---
Confidence 577899999999999999865432111110000000000 001246788874 8999999999997653321100
Q ss_pred eeeeccccCCCceEEccCeEEEEEECCCCeEEEEEecCCCcEEEEEEEEEEeecCCCCCCCCCCcceEEccCCCC-ccCC
Q 002383 585 TVYKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTY-PIEP 663 (929)
Q Consensus 585 ~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~l~si~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sgaYiF~P~~~~-~~~~ 663 (929)
........|||++|+|+|+ .+|.| +|+||++|+++. +++.|.. . ++.++||+|.|.... ....
T Consensus 482 ------~~~~~~~~ieN~~~~v~i~-~~G~l-~l~dk~~gr~~~---~~~~~~d-~----~d~gD~yd~~p~~~d~~~~~ 545 (875)
T PRK09819 482 ------PKSSAEGIIENEFYQITLN-ENGTL-TIVDKKSGKTYD---RQLIIEE-N----GDDGDEYDYSPPREDWVITS 545 (875)
T ss_pred ------ccccccceEecCcEEEEEe-cCCcE-EEEECCCCcEEe---ceEEEEe-c----CcCCCCcccCCCCCCCEEec
Confidence 1223457899999999999 78999 599999999874 4455542 2 446689999987543 2222
Q ss_pred CC-ccEEEEEEcCceEEEEEEE------------------cCeEEEEEEEecCCCceEEEEEECcccccCCCCcEEEEEE
Q 002383 664 EG-QLSFTILRGPLLDEVHQRI------------------NPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQI 724 (929)
Q Consensus 664 ~~-~~~i~v~~G~l~~~v~~~~------------------~~~~~~~irLy~~~~~ie~e~~v~~~~~~~~~~~ev~~~f 724 (929)
.. ...+.+++||+.+++++.+ .+.++|+++|++++++|+|+++|++. ..+|.+++.|
T Consensus 546 ~~~~~~~~v~~~~~~~~~~i~~~~~~p~~~~~r~~~~~~~~~~i~~~i~L~~~s~~i~~~~~vdw~----~~~~~Lrv~f 621 (875)
T PRK09819 546 AEAVPSVEISHSAWQSRAVIRYRLAVPKNLEERAAGQKTGRMPVKLVVTLSKNSRRIDFDVNLDNQ----ADDHRLRVLF 621 (875)
T ss_pred cCCcceEEEEEcCCeEEEEEEEEEeCCcChhhHhhccccceEEEEEEEEEecCCCEEEEEEEEecc----ccceEEEEEc
Confidence 22 3467788899988877664 24688999999999999999999865 5789999999
Q ss_pred EeeccCCCeEEEcCCCcceeeecccc--ccCcccc--cccccccceeeeeeeEEEEeccceeEEEeccccccccccC--C
Q 002383 725 TSNMISNKTFYTDSSGRDFIERIRDY--RKDWNLE--VNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIAD--G 798 (929)
Q Consensus 725 ~t~i~s~~~fyTDsnG~~~i~R~~~~--r~~w~~~--~~~pv~~NyYP~~s~~~I~D~~~~ltvl~dr~~G~ssl~~--G 798 (929)
+++|.+...+|. .+|+.++|+++. .++|+.. .+.|++ .|||.+||.|.|.+.+++|+||+.+|+....+ +
T Consensus 622 p~~i~~~~~~~d--~~fG~i~Rp~~~~~~~~W~~~~~~e~p~~--~~~~~~~v~ls~~~~Gvall~dg~~ey~v~g~~~~ 697 (875)
T PRK09819 622 PTEIASKFSLAD--QQFGSITRPVNDPAMDVWEQEGWQEAPIS--IEPMQSFVALHDERHGVAVFTEGVREYEIIGENYD 697 (875)
T ss_pred cCCCCCCceEcC--CCceEEECCCcCccccccccccceeCCCC--ChhhhceEEEecCCceEEEECCCcceEEEecCCCC
Confidence 999998776554 999999999754 4688754 334544 79999999999999999999999999965543 3
Q ss_pred eEEEEEEeeec--------ccCCcCccccccccccccccccCeEEEeEEEEEeccccch-hhhcccchhhhccCceeeee
Q 002383 799 QLELMLHRRLV--------ADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEA-AKWRRSFGQEIYSPFLLAFT 869 (929)
Q Consensus 799 ~iElml~Rr~~--------~DD~rGvge~l~e~~~~~~~~~g~~~~~~~~l~~~~~~~~-~~~~r~~~~~~~~p~~~~~~ 869 (929)
+|.|+|.|+.. .-.+|..|..+-... .+|.|. -.-+|.|....-+-. +.. ...+..++.|+.++-.
T Consensus 698 ~i~LTLlRs~g~lgk~~l~~rpgr~sG~~~ptP~---aq~~G~-h~f~y~l~ph~g~~~~~~~-~~~a~~~n~p~~~~~~ 772 (875)
T PRK09819 698 TIALTLFRGVGLLGKEDLLYRPGRPSGIKIPTPD---SQLLGE-LSFRFSLTSYEGTFDEAGV-AQQAKEYLTPVQCYNK 772 (875)
T ss_pred eEEEEeecccCccCCCccccCCCcccCCccCCCh---HHhcCc-eEEEEEEEEccCCcchHHH-HHHHHHhccCcceeec
Confidence 89999999973 334555553332211 123443 245566655322211 221 3357788888876521
Q ss_pred ccC----CCccccccccccccCCcCCCCCCceeEEEeEecCC-CcEEEEeeehh
Q 002383 870 EQD----GDHWANSHLATYSAMDTTYVLPDNVALITLQELDS-GKILLRLAHLY 918 (929)
Q Consensus 870 ~~~----~~~~~~~~~~~~s~l~~~~~lP~~vhlltl~~~~~-~~~llRl~h~~ 918 (929)
... ..........++|.+. -.+.+|.|-++++-.+ +.++|||-|-.
T Consensus 773 ~~~~~~~~~~~~~~~~~~~s~~~---~~~~~i~~sa~K~aed~~~~ilRlyn~~ 823 (875)
T PRK09819 773 IPFLNMRLNDEEFTLPESYSLLK---MPPDGAVLSAVKKAEDRDGLILRFFNPA 823 (875)
T ss_pred ccccccccCcccCCCCcccccee---eCCCCEEEEEEEEeccCCCEEEEEeCCC
Confidence 100 0000011122344332 2345899999998664 45999999863
No 5
>KOG4342 consensus Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.2e-76 Score=639.40 Aligned_cols=623 Identities=16% Similarity=0.217 Sum_probs=493.2
Q ss_pred CCceEEEEEecccCCCccchhhhheeecCCcchhhHHHHHHHHHHHHHHHhCCCCeEEEechhHHHHHHhccChHHHHHH
Q 002383 33 PGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVV 112 (929)
Q Consensus 33 ~~~~~VhlVpHSH~D~gWl~T~~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~~kF~~~e~~~~~~ww~~~~p~~~~~v 112 (929)
...-+||.|+|.|+|.+|||+|.|.. +++.+-..+.+..|+++|+++|+-++... .+|.++.+|+.++++
T Consensus 278 es~~nv~aiGhCHIDTAWLWPFaETr---------RKivRSW~tq~~lMdR~PEy~FvcSQAqQ-~~WlkedhP~~f~kl 347 (1078)
T KOG4342|consen 278 ESQHNVHAIGHCHIDTAWLWPFAETR---------RKIVRSWVTQLQLMDRNPEYIFVCSQAQQ-LEWLKEDHPGLFSKL 347 (1078)
T ss_pred ccccceeeeccccccchhhcChHHHH---------HHHHHHHHHHHhHHhhCcceeEehhhHHH-HHHHhhhChhHHHHH
Confidence 44689999999999999999999997 67788888999999999999999865444 599999999999999
Q ss_pred HHHHHcCCEEEEcceeeecccCCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHHHHhhcCCcEEEEee
Q 002383 113 KQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFAR 192 (929)
Q Consensus 113 k~lV~~GrlE~vgGgwv~~Dea~~~~es~I~ql~~G~~~l~~~fG~~p~v~W~iD~FGhs~~~p~ll~~~~G~~~~~~~R 192 (929)
++.+..||+-.|||.||++|.++|++||+|||++.|++|+.++||.+.+.-|+||+||+|+++|||. +.+||+.+++++
T Consensus 348 ~e~~~q~qF~pvGGtWVE~DtNiPsGEslvRQFl~GQ~FFlkeFG~~c~~FWLPDTFGYSsQ~PQic-rlcGidrFLTQK 426 (1078)
T KOG4342|consen 348 QEFACQGQFVPVGGTWVEMDTNIPSGESLVRQFLQGQNFFLKEFGKMCSEFWLPDTFGYSSQLPQIC-RLCGIDRFLTQK 426 (1078)
T ss_pred HHHHhcCceeeccceEEecCCCCCChHHHHHHHHhhhhHHHHHhhhhhcceeccccccccchhhHHH-HhhcHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cChHhHHHhhhcCceeEEEeeCCCCCCCCceeeeeCCC-CCCCCCCCCCcccCCCCCCccCCccccCCChHHHHHHHHHH
Q 002383 193 IDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPK-NYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSA 271 (929)
Q Consensus 193 i~~~~k~~~~~~~~~eF~W~~~d~~~~gs~i~th~~~~-~Y~~p~~~f~f~~~~~~~p~~~~~~i~~~nv~~~~~~~~~~ 271 (929)
+.|+..+.+++.. |.|.|.| ||+|++||-|. .|... -++ .+.+..
T Consensus 427 LSWNniNSFPhsT---FnW~glD----GSqvl~HmPPgntYtad-----------------------~~v----~dVL~t 472 (1078)
T KOG4342|consen 427 LSWNNINSFPHST---FNWEGLD----GSQVLVHMPPGNTYTAD-----------------------GSV----EDVLKT 472 (1078)
T ss_pred ccccccCcCCccc---eeeeecc----CceEEEecCCCCccccc-----------------------CcH----HHHHHH
Confidence 9999999998876 9999999 99999998774 55532 122 233444
Q ss_pred HHHHhhhcCCCeEEEeccCCCCCcc-hHHHHHHHHHHHHHHhcCC-CeeEEEc-ChhhHHHHHHhc---CCCCCCcccCC
Q 002383 272 AIAQANITRTNHIMWTMGTDFKYQY-AHTWFRQMDKFIHYVNQDG-RVNALYS-TPSMYIDAKYAA---NESWPLKTDDF 345 (929)
Q Consensus 272 ~~~~~~~~~t~~il~~~G~Df~y~~-a~~~~~n~~~li~~~N~~~-~~~i~~s-T~~~Yf~al~~~---~~~~p~~~gDf 345 (929)
+.+....-+.++=|+.+|-....+. .+++.+.|.++-..-|..+ -++++.| |+++||+++.+. +..+|+|.||+
T Consensus 473 v~qnk~~~~~~~gl~lfG~GDGGGGPT~eML~klrR~r~~~Nt~G~lP~vqlg~tvdeffd~ilkrtnqg~~LptW~GEL 552 (1078)
T KOG4342|consen 473 VAQNKDKGRANHGLFLFGFGDGGGGPTQEMLDKLRRIRSLSNTDGVLPRVQLGITVDEFFDAILKRTNQGHDLPTWVGEL 552 (1078)
T ss_pred HHhcCCccccCcceEEEEecCCCCCCcHHHHHHHHHhhcccccCCcccceeecCCHHHHHHHHHhhhccCCcccccchhe
Confidence 4444444455665666663322222 2333333332222334455 6899999 999999999765 45799999995
Q ss_pred -ccccccCCCceeeeeccchhhhHHHHHHhHHHHHHHHHHhhhcc-----ccCCCchHHHHHHHHhhhccccccCCcccc
Q 002383 346 -FPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGR-----NEVGLSTDSLADALALVQHHDAVSGTEKQH 419 (929)
Q Consensus 346 -fpy~~~~~~yWtGyyTSRp~~K~~~R~~e~~L~~ae~l~~l~~~-----~~~~~~~~~l~~~l~~~QhHDaItGTs~~~ 419 (929)
|++|+ |.|||++.+|+++|++|..|+.+|.+.+++.. .||...++.||+.++++|+||.+||++++.
T Consensus 553 yfEfHr-------GTYTtqAq~KKlmR~~Ei~LHD~E~~sslas~~s~dy~YP~~qlq~LWr~~LLcQFHDVlpGSCIeM 625 (1078)
T KOG4342|consen 553 YFEFHR-------GTYTTQAQIKKLMRECEIILHDVELLSSLASARSADYLYPAAQLQHLWRLLLLCQFHDVLPGSCIEM 625 (1078)
T ss_pred EEEEec-------CceeeHHHHHHHHHHHHHHhhhHHHHHHHHHhhcccccCcHHHHHHHHHHHHHHHhcccCCcHHHHH
Confidence 58886 99999999999999999999999999998643 356778999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCcccccccccccccCCCCccccCCCceEEEEEEcCCCceEeE
Q 002383 420 VADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKRED 499 (929)
Q Consensus 420 V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~ln~s~~~~~~~~~~~~~~~~v~vfNpl~~~r~~ 499 (929)
|++|.+-.+.+..+.++.++..+++.|.... .+...+++.|+|+|.|.+
T Consensus 626 VykeA~p~~~~v~k~~~tLl~~a~~~L~as~-------------------------------s~ke~L~~~nTLpW~~~~ 674 (1078)
T KOG4342|consen 626 VYKEAMPHYEDVRKHGNTLLSAAAAALCASE-------------------------------SGKEGLLIVNTLPWKRIE 674 (1078)
T ss_pred HHHhhhhHHHHHHHhhHHHHHHHHHHHhcCC-------------------------------CCccceEEEeccccceee
Confidence 9999999999999999999999998885321 123468899999999999
Q ss_pred EEEEEEeCCeEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCCCcEEEEEEeecCCCceEEEEEEeCCcccC
Q 002383 500 IIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAAS 579 (929)
Q Consensus 500 ~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vPplG~~~y~i~~~~~~~~ 579 (929)
++.++-+...... + ..++|.+|++... +.
T Consensus 675 v~~~~kp~k~~~~-----------------------------------------e---~c~~~g~~ta~vt-------~~ 703 (1078)
T KOG4342|consen 675 VMALPKPGKAHSL-----------------------------------------E---LCTVPGMGTAPVT-------PP 703 (1078)
T ss_pred eecccCCCCceeE-----------------------------------------E---EeccCCccccCCC-------CC
Confidence 8876643221110 0 1356666554311 00
Q ss_pred ccccceeeeccccCCCceEEccCeEEEEEECCCCeEEEEEecCCCcEEEE---------EEEEEEeecCCCCCCCCCCcc
Q 002383 580 HSGMRTVYKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLL---------EQSYIYYRGDDGSKDLQPSGA 650 (929)
Q Consensus 580 ~~~~s~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~l~si~dk~~g~~~~~---------~~~~~~Y~~~~g~~~~~~sga 650 (929)
.+++.. -...+.+++.|+.+||.++ .+|.|+||+|...|++..- .++|..|... +-.|.|
T Consensus 704 ---~~p~~~--yq~Dd~~~L~Ng~lrV~i~-p~G~itSl~d~~~grE~ld~~~Grn~~GaNQfVlfdD~-----PL~WqA 772 (1078)
T KOG4342|consen 704 ---TSPVFV--YQTDDSVTLDNGILRVKID-PTGRITSLVDVASGREALDTAEGRNAVGANQFVLFDDV-----PLYWQA 772 (1078)
T ss_pred ---CCceeE--EecCCeEEEECCEEEEEEC-CCCceeeeeehhcccchhcccccccccCcccEEEecCC-----ccchhh
Confidence 011111 1245678999999999999 5799999999988888651 1345555311 556677
Q ss_pred eEEccCCCCccCC-CCccEEEE-EEcCceEEEEEEE----cCeEEEEEEEecCC-----CceEEEEEECcccccCCCCcE
Q 002383 651 YIFRPNGTYPIEP-EGQLSFTI-LRGPLLDEVHQRI----NPWIYQVTRVYKGK-----DHAEIEFTVGPIPIDDGIGKE 719 (929)
Q Consensus 651 YiF~P~~~~~~~~-~~~~~i~v-~~G~l~~~v~~~~----~~~~~~~irLy~~~-----~~ie~e~~v~~~~~~~~~~~e 719 (929)
|+-.--.-+.+++ .....+.| .+|+++..+.+.+ ++.+.++|.|-.+. +.+.|.++|+ |. +.+|-
T Consensus 773 WDte~ysle~y~vl~k~k~v~v~~~g~lr~sv~v~~qISe~s~~k~~isL~~~~~~ak~~~V~f~teV~---Wh-e~~KF 848 (1078)
T KOG4342|consen 773 WDTEDYSLERYPVLGKAKTVAVGTEGGLRGSVWVLLQISENSRLKQEISLDVGCTDAKLPYVRFHTEVH---WH-EAHKF 848 (1078)
T ss_pred hhhhhhceecceecCCCceEEeecCCCcceEEEEEEEcCcccccceEEEEecccccccCCceeeEEEEe---eh-hcCce
Confidence 7432111112333 23345666 7999988876654 57899999997665 7899999987 53 57899
Q ss_pred EEEEEEeeccCCCeEEEcCCCcceeeeccccccCcccccccccccceeeeeeeEEEEeccceeEEEeccccccccccCCe
Q 002383 720 VVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQ 799 (929)
Q Consensus 720 v~~~f~t~i~s~~~fyTDsnG~~~i~R~~~~r~~w~~~~~~pv~~NyYP~~s~~~I~D~~~~ltvl~dr~~G~ssl~~G~ 799 (929)
+.+.|+.+|.|...-|. .+|++.||+++|+++|+-...|.... .++...|-..+++|||||++|. |....-
T Consensus 849 LKVEFPv~irs~fAsYE--tQFGitkRPTHYNTSWDvAkFEVchh------kfaDySe~~~Gvs~LNDCKYGf-SthGnl 919 (1078)
T KOG4342|consen 849 LKVEFPVRIRSSFASYE--TQFGITKRPTHYNTSWDVAKFEVCHH------KFADYSEHGFGVSLLNDCKYGF-STHGNL 919 (1078)
T ss_pred EEeeccccccccchhhh--hhcccccCCccccccchhhHhHHHHh------hhhhhhhcccceeeeccccccc-ccccce
Confidence 99999999998666666 99999999999999999877776553 5688899899999999999998 689999
Q ss_pred EEEEEEeeecccCC
Q 002383 800 LELMLHRRLVADDN 813 (929)
Q Consensus 800 iElml~Rr~~~DD~ 813 (929)
|.|.|.|.+..+|.
T Consensus 920 mrLSLLRsPKaPDA 933 (1078)
T KOG4342|consen 920 MRLSLLRSPKAPDA 933 (1078)
T ss_pred eeehhhcCCCCCCc
Confidence 99999999999996
No 6
>PF01074 Glyco_hydro_38: Glycosyl hydrolases family 38 N-terminal domain; InterPro: IPR000602 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). Lysosomal alpha-mannosidase is necessary for the catabolism of N-linked carbohydrates released during glycoprotein turnover. The enzyme catalyses the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides, and can cleave all known types of alpha-mannosidic linkages. Defects in the gene cause lysosomal alpha-mannosidosis (AM), a lysosomal storage disease characterised by the accumulation of unbranched oligo-saccharide chains.; GO: 0004559 alpha-mannosidase activity, 0005975 carbohydrate metabolic process; PDB: 2WYI_A 2WYH_A 1O7D_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....
Probab=100.00 E-value=2.5e-60 Score=517.01 Aligned_cols=270 Identities=30% Similarity=0.527 Sum_probs=216.9
Q ss_pred EEEEEecccCCCccchhhhheeecCCcchhhHHHHHHHHHHHHHHHhCCCCeEEEechhHHHHHHhccChHHHHHHHHHH
Q 002383 37 NVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLV 116 (929)
Q Consensus 37 ~VhlVpHSH~D~gWl~T~~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~~kF~~~e~~~~~~ww~~~~p~~~~~vk~lV 116 (929)
+||+|||||+|+||++|+++|. ..+.++|+++++.|+++|++||++.|+.++. ||.+..|+.++++|+||
T Consensus 1 ~v~~i~HsH~D~~W~~t~~~~~---------~~~~~~~~~~l~~l~~~~~~~f~~~~~~~~~-~~~~~~p~~~~~~~~lv 70 (275)
T PF01074_consen 1 TVHVIPHSHWDRGWLWTFEEYR---------RYLVNILDSVLDLLEEDPDFRFIDGQTAYLE-DYLEDAPEEFKRIKKLV 70 (275)
T ss_dssp EEEEEEEEB--SSSSS-HHHHH---------HHHHHHHHHHHHHHHH-TT--EECTBCHHHH-HHHHCSGHHHHHHHHHH
T ss_pred CEEEccccccchhhcccHHHHH---------HHHHHHHHHHHHHHHhCCcceEeechhHHHH-HHHHhCCHHHHHHHHHH
Confidence 6999999999999999999994 7899999999999999999999998888875 55555999999999999
Q ss_pred HcCCEEEEcceeeecccCCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHHHHhhcCCcEEEEeecChH
Q 002383 117 NSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQ 196 (929)
Q Consensus 117 ~~GrlE~vgGgwv~~Dea~~~~es~I~ql~~G~~~l~~~fG~~p~v~W~iD~FGhs~~~p~ll~~~~G~~~~~~~Ri~~~ 196 (929)
++||||+|||||||+||+++++|++||||++|++|++++||++|++||+||+||||+++|+|| +++||++++++|++++
T Consensus 71 ~~Gri~~vgg~~~~~D~~l~~~Eslirql~~G~~~~~~~fg~~~~~~~~~D~FG~~~~lP~il-~~~Gi~~~v~~r~~~~ 149 (275)
T PF01074_consen 71 KEGRIEIVGGWYVQPDENLPSGESLIRQLLYGHKYLRKEFGVRPKVAWQPDSFGHSAQLPQIL-KQFGIKYFVIWRISWN 149 (275)
T ss_dssp HTTSEEESSSBSS-B-SSSS-HHHHHHHHHHHHHHHHHHHTG--SEEEESSSSSB-TCHHHHH-HTTT-SEEEESSS-HH
T ss_pred HhceeEEeCceeeeccccCCCHHHHHHHHhhhHHHHHHhcCCCCCeEEeCCCCCCchhhHHHH-hccCcceEEEeccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999 8999999999999999
Q ss_pred hHHHhhhcCceeEEEeeCCCCCCCCceeeeeCCCCCCCCCCCCCcccCCCCCCccCCccccCCChHHHHHHHHHHHHHHh
Q 002383 197 DRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQA 276 (929)
Q Consensus 197 ~k~~~~~~~~~eF~W~~~d~~~~gs~i~th~~~~~Y~~p~~~f~f~~~~~~~p~~~~~~i~~~nv~~~~~~~~~~~~~~~ 276 (929)
.++.++..+.++|+|+|+| ||+||||+++.+|..| ..+ .+. ++++.+++++++.+
T Consensus 150 ~~~~~~~~~~~~F~W~g~d----Gs~ilt~~~~~~y~~~--~~~------------------~~~-~~~~~~~~~~~~~~ 204 (275)
T PF01074_consen 150 DKNPFKANPQSEFYWQGPD----GSEILTHVLPNYYYGP--WYG------------------SEF-EDADELLEQLRKLA 204 (275)
T ss_dssp HHHHHHHTTSSEEEEE-TT----STEEEEEE-TST-TSH--HTT------------------CCH-HHHHHHHHHHHHHH
T ss_pred cccccccCCCceEEEecCC----CcceeEEecccCCCCC--CCC------------------ccc-ccHHHHHHHHHHHH
Confidence 9999888889999999999 9999999999877653 011 011 35788999999999
Q ss_pred hhcCCCeEEEeccCCCCCcchHHHHHHHHHHHHHHh---c-CCCeeEEEcChhhHHHHHHhcCCCCCCc-ccCCcccc
Q 002383 277 NITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVN---Q-DGRVNALYSTPSMYIDAKYAANESWPLK-TDDFFPYA 349 (929)
Q Consensus 277 ~~~~t~~il~~~G~Df~y~~a~~~~~n~~~li~~~N---~-~~~~~i~~sT~~~Yf~al~~~~~~~p~~-~gDffpy~ 349 (929)
..+.++++|+|+|+| ..++..++++++++| + ...+++++||+++||++++++ .+||++ +|||+||+
T Consensus 205 ~~~~~~~~l~~~G~d------~~~~~~~~~~~~~i~~~~~~~~~~~i~~sT~~~yf~~l~~~-~~~p~~~~~df~~Y~ 275 (275)
T PF01074_consen 205 KKYYTNNILIPYGDD------DDGGPPDEELIEYINEWNEEYPGPKIKYSTLSEYFEALEKE-SELPVHYHGDFPPYA 275 (275)
T ss_dssp CCSSSSEEEEEEEEE------HHHHHHHHHHHHHHHHHHHHGCTEEEEE--HHHHHHHHHHC---B-EE-ES-B-S-E
T ss_pred HhcCCCceEEEeecC------CCCCCcHHHHHHHHHHhcccCCCeEEEECCHHHHHHHHHhc-cCCCcccCCCCCCCC
Confidence 999999999999998 222345555555555 4 358999999999999999998 999999 99999996
No 7
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.8e-49 Score=476.60 Aligned_cols=671 Identities=19% Similarity=0.190 Sum_probs=479.4
Q ss_pred eEEEEEecccCCCccchhhhheeecCCcchhhHHHHHHHHHHHHHHHhCCCCeEEEechhHHHHHHhccChHHHHHHHHH
Q 002383 36 INVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQL 115 (929)
Q Consensus 36 ~~VhlVpHSH~D~gWl~T~~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~~kF~~~e~~~~~~ww~~~~p~~~~~vk~l 115 (929)
.+|+.+.|+|.|..|+|++++.. .+......+++..+...|.++|..+ +...+.|..+..|+..++ ++
T Consensus 198 ~~I~~~ghahid~aWlw~l~et~---------r~a~ts~~~~~~l~D~~p~~~~~~s-~~~~y~~l~~d~p~l~~~--~~ 265 (943)
T COG0383 198 NEIPAVGHAHIDTAWLWPLDETE---------RKASTSFSLVMNLMDHYPVQKFVQS-AAALYNWLKPDVPFLFSR--PA 265 (943)
T ss_pred ccccccchhhHHHHHhccHHHHH---------HHHhhhhhheecccccChhhhhhhh-HHHHHHHhcCccHHHhhc--cc
Confidence 44999999999999999999997 6778889999999999999999985 555579999999999999 99
Q ss_pred HHcCCEEEEcceeeecccCCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHHHHhhcCCcEEEEeecCh
Q 002383 116 VNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDY 195 (929)
Q Consensus 116 V~~GrlE~vgGgwv~~Dea~~~~es~I~ql~~G~~~l~~~fG~~p~v~W~iD~FGhs~~~p~ll~~~~G~~~~~~~Ri~~ 195 (929)
|+.|+||.++|+||.+|.++++||+++||+.+|+||+.+.||..+|+.|.||+||.|+++|||+ ..+|++.|+++++.|
T Consensus 266 v~~~~~~~~~g~~ve~d~n~~sGEslsrq~~~gq~~~~~~f~~ssri~w~pd~fg~s~~Lpqil-~p~gi~~f~t~klaw 344 (943)
T COG0383 266 VEFEQWEIVGGMWVEEDLNTPSGESLSRQFLYGQRFFTEKFGASSRIYWKPDSFGFSGQLPQIL-EPLGIDVFVTTKLAW 344 (943)
T ss_pred ccccceEEeecccccccCCccccchhhhhhhccceeeecccCccceeEeehhccccchhHHHHH-Hhhcchhhhccccch
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HhHHHhhhcCceeEEEeeCCCCCCCCceeeeeCCCCCCCCCCCCCcccCCCCCCccCCccccCCChHHHHHHHHHHHHHH
Q 002383 196 QDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQ 275 (929)
Q Consensus 196 ~~k~~~~~~~~~eF~W~~~d~~~~gs~i~th~~~~~Y~~p~~~f~f~~~~~~~p~~~~~~i~~~nv~~~~~~~~~~~~~~ 275 (929)
++.+.++++. |.|++.+ |+++++|..+.+++.. . +. ....++..
T Consensus 345 n~tn~~Ph~~---~~w~~~d----g~e~~~hds~~~~~~d-------~---------------------v~-~~~~~r~~ 388 (943)
T COG0383 345 NDTNRFPHDL---LRWRWKD----GTENLAHDSICGCSSD-------P---------------------VH-REMEYRFE 388 (943)
T ss_pred hhccCCChhH---heeeccc----ccccceeecCCCCccc-------H---------------------HH-HHHHhhhh
Confidence 9999999975 9999999 9999999866333211 0 00 01111111
Q ss_pred hhhcCCCeEEEeccC-CCCCcchHHHHHHHHHHHHHHhcCCCeeEEEcChhhHHHHH----HhcCCCCCCcccCC-cccc
Q 002383 276 ANITRTNHIMWTMGT-DFKYQYAHTWFRQMDKFIHYVNQDGRVNALYSTPSMYIDAK----YAANESWPLKTDDF-FPYA 349 (929)
Q Consensus 276 ~~~~~t~~il~~~G~-Df~y~~a~~~~~n~~~li~~~N~~~~~~i~~sT~~~Yf~al----~~~~~~~p~~~gDf-fpy~ 349 (929)
. .....|+.+|. |+..+.+.++-.+.. -..+..+|... .......|++.|++ +.+|
T Consensus 389 ~---~~~~~~~~~g~gd~ggg~~~dm~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ely~E~h 450 (943)
T COG0383 389 K---INQVGLYLYGYGDGGGGPSIDMLENPE---------------LPIAEGVFNTGVEKKTSTLELVPTWDGELYLELH 450 (943)
T ss_pred h---hccceeEEeeccCCCCCCCHHHHhccc---------------cccccceeeecceeeeeecccccccchhhhhhcc
Confidence 1 23445556664 454444332222111 12223333322 12245689999985 4888
Q ss_pred ccCCCceeeeeccchhhhHHHHHHhHHHHHHHHHHhhhc------cccCCCchHHHHHHHHhhhccccccCCcccchhH-
Q 002383 350 DRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKG------RNEVGLSTDSLADALALVQHHDAVSGTEKQHVAD- 422 (929)
Q Consensus 350 ~~~~~yWtGyyTSRp~~K~~~R~~e~~L~~ae~l~~l~~------~~~~~~~~~~l~~~l~~~QhHDaItGTs~~~V~~- 422 (929)
+ |.|||....|.++|.+|..|+.+|.+.+++. ..++...++++|+.++++|+||.++|++...|+.
T Consensus 451 r-------g~~t~~~~~k~~~r~~e~~l~d~e~~~~~~~~~~~~~~~~~~~~~~~~w~~~l~~qfhdvlpgs~i~~vy~~ 523 (943)
T COG0383 451 R-------GTYTTQAKTKKLNRESEFLLEDAEGISVEAAIIEGDRVTYPYELLNELWKGLLLAQFHDVLPGSSIKEVYSY 523 (943)
T ss_pred C-------ceeehhhhhhhhccccccceecccccchhhhhhccccccCchhhHHHHHHHhhhhhceeeccccceeeechh
Confidence 7 9999999999999999999999999887742 3456678899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCcccccccccccccCCCCccccCCCceEEEEEEcCCCceEeEEEE
Q 002383 423 DYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIR 502 (929)
Q Consensus 423 dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~ln~s~~~~~~~~~~~~~~~~v~vfNpl~~~r~~~V~ 502 (929)
+....+......+..++..+++.|.+. ......++|++.|.+.
T Consensus 524 ~a~~~~~~~~~~~~~i~~~~~~~l~~~---------------------------------~~e~~~~~~~~~~~~~---- 566 (943)
T COG0383 524 DALPLLEVVQKGASKIAELALKVLSSQ---------------------------------CLENLFVKNTLSWNGI---- 566 (943)
T ss_pred hHHHHHHhhhccchhhhhhhhhhhhhc---------------------------------cccceEEEeeccCCcc----
Confidence 888888888888888888888877432 1235779999999871
Q ss_pred EEEeCCeEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCCCcEEEEEEeecCCCceEEEEEEeCCcccCccc
Q 002383 503 IPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSG 582 (929)
Q Consensus 503 i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vPplG~~~y~i~~~~~~~~~~~ 582 (929)
.++|.|..+..++.+.+. ...++|++|...+++++.....
T Consensus 567 ------~~~v~d~~~~~~~~~~~~------------------------------~~ed~~~~g~~~i~~~~~~~~~---- 606 (943)
T COG0383 567 ------SLQVLDKTSGGIYTSQLT------------------------------ALEDVGDIGNEYIYSQPTKTEP---- 606 (943)
T ss_pred ------eEEEEEcCCCceehhhhh------------------------------hhhhcCCcccceeEeccccccc----
Confidence 456666655544433221 1236888898888873322210
Q ss_pred cceeeeccccCCCceEEccCeEEEEEECCCC-eEEEEEecCCCcEEEEEEEEEEeecCCCCCCCCCCcceEEccCCCC-c
Q 002383 583 MRTVYKSQIRQNDTIEVGPGNLKLLYSGKRA-KLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTY-P 660 (929)
Q Consensus 583 ~s~~~~~~~~~~~~~~ieN~~~~v~~~~~~G-~l~si~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sgaYiF~P~~~~-~ 660 (929)
..+..+++..+..++ ++| .+..+.++ +..+.||.-.+.... .
T Consensus 607 ------------~~~~~~~~~~~~~~~-~~gn~~~~~~~~-----------------------~~~~~~w~i~~~~~~~~ 650 (943)
T COG0383 607 ------------ETVIEEKEWKRLIIN-DTGNQLALIEDE-----------------------PAYWDAWNIDKFLEEEL 650 (943)
T ss_pred ------------cccccccchheeecc-CCCcceeeeecc-----------------------cceechhcchhhhhhhh
Confidence 122334444445554 566 33322211 223345554443321 2
Q ss_pred cCCCCccEEEEEEcCceEEEEEEE---cCeEEEEEEEecCCCceEEEEEECcccccCCCCcEEEEEEEeeccCCCeEEEc
Q 002383 661 IEPEGQLSFTILRGPLLDEVHQRI---NPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTD 737 (929)
Q Consensus 661 ~~~~~~~~i~v~~G~l~~~v~~~~---~~~~~~~irLy~~~~~ie~e~~v~~~~~~~~~~~ev~~~f~t~i~s~~~fyTD 737 (929)
........-.+++||+..++++.. .+.+++.|++++++++|+|+++|++. ..+|.+++.|++++.++.. ..|
T Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~l~~~s~~l~~~t~vd~q----~~~~~lrv~fp~~~~s~~a-~~d 725 (943)
T COG0383 651 LALTALPEEAIENGPLVRTVRVSKELTESTITQKVTLYKGSPRLDFKTEVDNQ----VRDHRLRVLFPTDIASDFA-TAD 725 (943)
T ss_pred hhhhccccchhccccceeeeeeeeeccceEEEEEEEEecCCceeEEEEEEEcc----ccceEEEEEecccccccce-ecc
Confidence 222222322358999999988765 46789999999999999999999855 4689999999999998653 334
Q ss_pred CCCcceeeeccccccCcccccccccccceeeeeeeEEEEeccce--eEEEeccccccccccCCeEEEEEEeee-------
Q 002383 738 SSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSE--LSILVDRSVGGSSIADGQLELMLHRRL------- 808 (929)
Q Consensus 738 snG~~~i~R~~~~r~~w~~~~~~pv~~NyYP~~s~~~I~D~~~~--ltvl~dr~~G~ssl~~G~iElml~Rr~------- 808 (929)
..|+.++|+++.+++|+....+ -|+..++.+.|...+ +++++|+++|++ ..++.|.|+|.|..
T Consensus 726 -~~fg~v~Rp~~~~~~W~~a~~e------~p~~~~vdls~~~~g~~vs~ln~~kYg~~-~~~~~l~lTLLrs~~~~gd~~ 797 (943)
T COG0383 726 -IPFGVVERPTHPNTSWENARFE------VPLQKFVDLSDGEYGVTVSLLGDCKYGIS-THGNLLALTLLRSVGELGDWG 797 (943)
T ss_pred -ccceeeccCCCCchhhhcccCc------chhhccccccCCccceeEeccCCcceeEe-ccCCEEEEEeccccccccccc
Confidence 9999999999999999865333 467899999999998 788999999995 59999999999988
Q ss_pred cccCCcCccccccccccccccccCeEEEeEEEEEeccccchhhhcccchhhhccCceeeeeccCCCccccccccccccCC
Q 002383 809 VADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAKWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMD 888 (929)
Q Consensus 809 ~~DD~rGvge~l~e~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~s~l~ 888 (929)
.++|. +- +|.|. .+.+|.+.+...+-........+..++.|........+.. .......++...
T Consensus 798 ~~P~p--------~A-----d~~g~-h~~~y~ly~h~~~~~~~~~~~~a~~~~~P~~~~~~~~~~~--~~~~~~~~~~~~ 861 (943)
T COG0383 798 YRPDP--------EA-----DCLGE-HEFTYALYPHQGSFLSAPTAVRAYELNVPVRTVQVEEDGV--EGTLEATLDLLE 861 (943)
T ss_pred ccCCc--------hh-----hhccc-eeEEEEEEEccccccccchhhhhhhccCceEEeecccccc--cccchhcccccc
Confidence 44442 22 22232 3445555554422111111112333555655444322110 000011111110
Q ss_pred c-CCCCCCceeEEEeEecCCC-cEEEEeeehhcccc
Q 002383 889 T-TYVLPDNVALITLQELDSG-KILLRLAHLYERTQ 922 (929)
Q Consensus 889 ~-~~~lP~~vhlltl~~~~~~-~~llRl~h~~~~~e 922 (929)
. ...-|+++-|-.+++-.++ .+.||+.+......
T Consensus 862 ~~~~~~~~~~~lsA~K~aed~~~~IlR~yn~~~~~~ 897 (943)
T COG0383 862 PLLLVGPDNLILSALKRAEDGDGLILRLYNPSGTKT 897 (943)
T ss_pred ccccCCCcceEEEeeeecccCCceEEEEeccCCCCc
Confidence 0 0146899999999997665 79999999887653
No 8
>PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). This domain is found at the C terminus of glycosyl hydrolases from family 38.; GO: 0015923 mannosidase activity, 0006013 mannose metabolic process; PDB: 2WYI_A 2WYH_A 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....
Probab=100.00 E-value=4.6e-40 Score=385.14 Aligned_cols=377 Identities=28% Similarity=0.417 Sum_probs=255.1
Q ss_pred EEEEEEcCCCceEeEEEEEEEeCCeEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCCCcEEEEEEeecCCC
Q 002383 485 LVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPL 564 (929)
Q Consensus 485 ~~v~vfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vPpl 564 (929)
++|+|||||+|+|+++|+|+++.+.+.+.|.+|++|++|+++... ....++|.|.++||||
T Consensus 1 ~~vvvfN~l~~~r~~vv~i~v~~~~~~~~~~~g~~v~~qi~~~~~-------------------~~~~~~l~f~~~vPal 61 (457)
T PF07748_consen 1 FPVVVFNPLPWPRSEVVEIPVNTPNVSVYDADGKPVPSQIIPEPY-------------------STGRYELLFVVDVPAL 61 (457)
T ss_dssp EEEEEEE-SSS-EEEEEEEEEEECEEEEECSTSHEEHCEEEEEEE-------------------EEEEEEEEEEEEE-TT
T ss_pred CEEEEEECCCCcEEEEEEEEeccCceEEEecCCcEeeEEEEeccC-------------------CCCceEEEEEeccCCc
Confidence 579999999999999999999999999999999999999998211 1245789998899999
Q ss_pred ceEEEEEEeCCcccCccccceeeeccccCCCceEEccCeEEEEEECCCCeEEEEEecCCCcEEE--EEEEEEEeecCCCC
Q 002383 565 GFNTYIISSAKQAASHSGMRTVYKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKL--LEQSYIYYRGDDGS 642 (929)
Q Consensus 565 G~~~y~i~~~~~~~~~~~~s~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~l~si~dk~~g~~~~--~~~~~~~Y~~~~g~ 642 (929)
||++|.|...+....... ... ....+...|||++|+|+||+.+|.|.+|+||++|+++. ..+++..|....++
T Consensus 62 Gy~~~~i~~~~~~~~~~~-~~~----~~~~~~~~leN~~~~v~~~~~tG~i~sl~dk~~g~~~~~~~~~~~~~y~~~~~~ 136 (457)
T PF07748_consen 62 GYKTYRIVEGESSEPSNE-ASI----AKDSGDNVLENEFYKVTFDPNTGGIKSLYDKKTGREYVDQDGNDFYIYEDIDGD 136 (457)
T ss_dssp EEEEEEEEECSS--TTC---CE----EETT-TTEEETSSEEEEE-TTTSSEEEEEETTTS-EEEEEECEEEEEEEBTTSC
T ss_pred eeEEEEeecccccccccc-cee----ecceeeEEEEccEEEEEEeCCCCeEEEEEEccCCeEEEeecCCceeEecccccc
Confidence 999999998776432210 000 01114578999999999996669999999999999999 88999999765443
Q ss_pred -C----CCCCCcceEEccCCCCccCCCCccEEEEEEcC--ceEEEEEEEcCeEEEEEEEecCCCceEEEEEECcccccCC
Q 002383 643 -K----DLQPSGAYIFRPNGTYPIEPEGQLSFTILRGP--LLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDG 715 (929)
Q Consensus 643 -~----~~~~sgaYiF~P~~~~~~~~~~~~~i~v~~G~--l~~~v~~~~~~~~~~~irLy~~~~~ie~e~~v~~~~~~~~ 715 (929)
. ....+|+|.|.|+++....+.-...+. ..+. ++.++.....+.++++++||+++++|||+++|+|.+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~-~p~~~~~~~~~~~~~~~~i~~~i~L~~~~~~ie~~~~vdn~~~--- 212 (457)
T PF07748_consen 137 YDISPLELQRSGAYLFVEDGPLRSSIRVEYKFE-LPKNLSLVKRSEQTGSSRITQTIRLYKGSPRIEFETEVDNWAE--- 212 (457)
T ss_dssp TTE-SCCCGSEECCEEEEESSSEEEEEEEEEEE-EESCBECEEEESCEEEEEEEEEEEEETTESSEEEEEEEEE-TT---
T ss_pred ccccccccccCceEEEEecCCceEEEEEEEEEe-ccCCcEEEEEEEeccceEEEEEEEEecCceEEEEEEEeccccc---
Confidence 0 133678888887664311000000000 1111 2233333345689999999999999999999986542
Q ss_pred CCc-EEEEEEEeeccCCCeEEEcCCCcceeeeccccccCcccccccccccceeeeeeeEEEEeccceeEEEecccccccc
Q 002383 716 IGK-EVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSS 794 (929)
Q Consensus 716 ~~~-ev~~~f~t~i~s~~~fyTDsnG~~~i~R~~~~r~~w~~~~~~pv~~NyYP~~s~~~I~D~~~~ltvl~dr~~G~ss 794 (929)
..+ +++++|+|+|.++..||+|.+|+.+.+|+++. +.|.++|||||...++|.|.+.+|+|+||+++|+++
T Consensus 213 ~~~~~l~~~f~t~i~~~~~~~~~~fG~~~r~~~~~~--------~~~~~~~~~p~~~~~~v~~~~~~l~i~~d~~~g~~~ 284 (457)
T PF07748_consen 213 DHRKELRVRFPTNIDSDEAFYDDQFGFIERKRPTHP--------NTPWEANYYPVPSHAFVDDSDSRLAILNDGKYGYES 284 (457)
T ss_dssp SCEEEEEEEEEES-S-TCEEEEESTTEEEEECESST--------TTTCGGG-EEECSCCEEEECSECEEEEESS-EEEEE
T ss_pred CCceeEEEEeecCCCCCCEEEECCCCeEEecCCccc--------cCCcccccCCCcceEEEEcCCCCEEEEcCCCcceEe
Confidence 233 69999999999999999987776655545442 367789999999999999999889999999999998
Q ss_pred cc-CCeEEEEEEeeecccCCcCccccccccccccccccCeEEEeEEEEEeccccchhhhcccchhhhccCceeeeeccCC
Q 002383 795 IA-DGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAKWRRSFGQEIYSPFLLAFTEQDG 873 (929)
Q Consensus 795 l~-~G~iElml~Rr~~~DD~rGvge~l~e~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~~r~~~~~~~~p~~~~~~~~~~ 873 (929)
+. +|+|+|||||++.+||++|+++ |+|.+.............+..+++|++++.....
T Consensus 285 ~~~~g~l~ltL~R~~~~D~g~~~~~--------------------~~l~~~~~~~~~~~~~~~a~~l~~Pl~~~~~~~~- 343 (457)
T PF07748_consen 285 LDQDGELELTLLRRPSQDDGRGVFR--------------------YALYPHSGSWDEADVVQEAYELNQPLIVFNSSNI- 343 (457)
T ss_dssp CTTTTEEEEEEEEEBSCG-SSSEEC--------------------CEEEEEEEEEEEEECHHCHHHHTS-EEEESS--T-
T ss_pred ccCCCeEEEEEeecccccCCccEEE--------------------EEEEEeccccccccchhhhhhccCccEEeecccc-
Confidence 87 9999999999999999999872 2333332211111012245688999987721111
Q ss_pred CccccccccccccCCc-CCCCCCceeEEEe-----EecCC-----CcEEEEeeehhccc
Q 002383 874 DHWANSHLATYSAMDT-TYVLPDNVALITL-----QELDS-----GKILLRLAHLYERT 921 (929)
Q Consensus 874 ~~~~~~~~~~~s~l~~-~~~lP~~vhlltl-----~~~~~-----~~~llRl~h~~~~~ 921 (929)
.......++++.. ...+|+++|+.+| +.-.+ +.++||+.+.....
T Consensus 344 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sa~K~aed~~~~~~~~ilR~~n~~~~~ 399 (457)
T PF07748_consen 344 ---QARQLNSFSGLSLPPEESPLNIHLLNLVVSALKKAEDGSDWSDGLILRLYNPSGKE 399 (457)
T ss_dssp ---TBEE--CE-TCS--SSEESTCECEEEEEEEEEEECTTTSEEETCEEEEEEESSSST
T ss_pred ---ccccccCCCcccccccccccccCCCcccccccccccccccccCCEEEEEEecCCCc
Confidence 1122233444432 1258999999998 44333 36888888776543
No 9
>PF09261 Alpha-mann_mid: Alpha mannosidase, middle domain; InterPro: IPR015341 Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0008270 zinc ion binding; PDB: 1O7D_C 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A 3BUQ_A ....
Probab=99.84 E-value=5.6e-22 Score=172.40 Aligned_cols=75 Identities=39% Similarity=0.541 Sum_probs=65.2
Q ss_pred CceeeeeccchhhhHHHHHHhHHHHHHHHHHhhhccc-----cCCCchHHHHHHHHhhhccccccCCcccchhHHHHHHH
Q 002383 354 AYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGRN-----EVGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRL 428 (929)
Q Consensus 354 ~yWtGyyTSRp~~K~~~R~~e~~L~~ae~l~~l~~~~-----~~~~~~~~l~~~l~~~QhHDaItGTs~~~V~~dy~~rl 428 (929)
+||+|||||||.+|+++|.+|++|+.||++++++... ++...++++|+.|+++||||+||||++++|++||.+||
T Consensus 1 e~~~G~~tSr~~~K~~~r~~e~~L~~~E~l~~~~~~~~~~~~~~~~~l~~~w~~l~~~q~HD~i~GT~~~~V~~d~~~rl 80 (80)
T PF09261_consen 1 EYWTGYYTSRPDIKQLNRRAENLLRAAEPLAALAALLGNGGDYPQEELEKAWKALLLNQFHDAITGTSIDSVYDDYLRRL 80 (80)
T ss_dssp EES-GGGCSTHHHHHHHHHHHHHHHCHHHHHHHCHHH--HSG-HHHHHHHHHHHHHCTTBTTTTTS-S-HHHHHHHHHHH
T ss_pred CCcceeeeCHHHHHHHHHHHHHHHHHHHHHHHHHhHhccCccccHHHHHHHHHHHHHhccCCCCCCcChHHHHHHHHHhC
Confidence 4899999999999999999999999999999986433 34567899999999999999999999999999999986
No 10
>smart00872 Alpha-mann_mid Alpha mannosidase, middle domain. Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase PUBMED:12634058.
Probab=99.81 E-value=2.2e-20 Score=162.00 Aligned_cols=74 Identities=38% Similarity=0.498 Sum_probs=67.9
Q ss_pred ceeeeeccchhhhHHHHHHhHHHHHHHHHHhhhc-----cccCCCchHHHHHHHHhhhccccccCCcccchhHHHHHHH
Q 002383 355 YWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKG-----RNEVGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRL 428 (929)
Q Consensus 355 yWtGyyTSRp~~K~~~R~~e~~L~~ae~l~~l~~-----~~~~~~~~~~l~~~l~~~QhHDaItGTs~~~V~~dy~~rl 428 (929)
||+|||||||.+|+++|++|++|+.+|.+.++++ ..++...++.+|+.|+++||||+||||++++|++||.+|+
T Consensus 1 ~h~G~~Tsr~~~K~~~r~~E~~L~~~e~~~~~~~~~~~~~~~~~~~l~~~wk~ll~~q~HD~i~Gt~~~~V~~d~~~r~ 79 (79)
T smart00872 1 YHRGTYTSRPYLKRLNRRLESLLRAAEELAALAALLLLGYKYPSEQLEELWKALLLNQFHDAITGTSIDEVYDDYETRL 79 (79)
T ss_pred CCCceecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHhcCcccCCccCcHHHHHHHHHhC
Confidence 7999999999999999999999999999998853 3456677899999999999999999999999999998874
No 11
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=99.74 E-value=9.2e-20 Score=223.49 Aligned_cols=358 Identities=16% Similarity=0.094 Sum_probs=256.7
Q ss_pred CceEEEEEecccCCCccchhhhheeecCCcchhhHHHHHHHHHHHHHHHhCCC-CeEEEechhHHHHHHhccChHHHHHH
Q 002383 34 GKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVV 112 (929)
Q Consensus 34 ~~~~VhlVpHSH~D~gWl~T~~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~-~kF~~~e~~~~~~ww~~~~p~~~~~v 112 (929)
.+..+|+++|+|||++|+.+.+.... .+...++.+++.++++|. .-|..+++....+.+....|+.++++
T Consensus 2 ~~~~~~ii~~~~wdrew~~~~e~~~~---------~~~~~~~~i~~~~~~~~~~~~~~~d~qt~~l~d~l~v~~~~~~~~ 72 (943)
T COG0383 2 LKKKVHIISHSHWDREWYFTSESHRI---------LLDELFEEIIELLQKDPEFAGFHLDGQTIWLDDYLAVPPELKDRV 72 (943)
T ss_pred CccccccchhhhhhhhceeeccceEe---------echhhhhhhhhccccCcccceecCccceeeeeeeEEecccchhhH
Confidence 35667999999999999999998874 344559999999999994 44888999887888888899999999
Q ss_pred HHHHHcCCEEEEcceeeecccCCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHHHHhhcCCcEEEEee
Q 002383 113 KQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFAR 192 (929)
Q Consensus 113 k~lV~~GrlE~vgGgwv~~Dea~~~~es~I~ql~~G~~~l~~~fG~~p~v~W~iD~FGhs~~~p~ll~~~~G~~~~~~~R 192 (929)
+.+++.|++ .+|.++.+.|.+.++.|+.+|+++.|..+ ...+|...+.||.+|.||+..++|+++ ..+||+.+.|+|
T Consensus 73 ~~~~~~~~l-~ig~~~~~~~~~~~~~e~~~rn~l~~~~~-~~~~~~~~~~g~~~d~~g~~~qa~~~~-~~~~i~~~~f~r 149 (943)
T COG0383 73 KLLIASGKL-GIGPWYTQTDTFILSGESNVRNLLIGEFD-AERFGKAMKLGYFPDTFGNLGQAPQLY-ENAGISAVAFGR 149 (943)
T ss_pred HHHHhhcCc-cccCCCCeeEEEEeccccceeeeecchHH-HHHhhhhhccccccccchhhhhhhHHH-HhcCCchhhccc
Confidence 999999999 79999999999999999999999999985 567779999999999999999999999 899999999999
Q ss_pred cChHh------HH---HhhhcCceeEEEeeCCCCCCCCceeeeeCCCCCCCCCCCCCcccCCCCCCccCCccccCCChHH
Q 002383 193 IDYQD------RA---KRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPE 263 (929)
Q Consensus 193 i~~~~------k~---~~~~~~~~eF~W~~~d~~~~gs~i~th~~~~~Y~~p~~~f~f~~~~~~~p~~~~~~i~~~nv~~ 263 (929)
+.... -. ......-.|..|.+++ +++++-+.++..|..+ ... |. +.-.-++-
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~----~~~~l~il~~~~y~~g-~~I---------~~-----~ghahid~ 210 (943)
T COG0383 150 GAALIGFGQLVLFELLEAYGSDFSEITWSEPD----GSQVLGILLANGYSNG-NEI---------PA-----VGHAHIDT 210 (943)
T ss_pred ccchhhcccchhhhhhhHhcCcCcccccccCC----chhhHHHHHHHHhhcc-ccc---------cc-----cchhhHHH
Confidence 65311 00 1112233467888888 7888888888888766 210 00 00001111
Q ss_pred HHHHHHHHHHHHhhhcCCCeEEEeccCCCCCcchHHHHHHHHHHHHHHhcC-CCeeEEEcC----hhhHHHHHHhc-CCC
Q 002383 264 RVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQD-GRVNALYST----PSMYIDAKYAA-NES 337 (929)
Q Consensus 264 ~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~~~n~~~li~~~N~~-~~~~i~~sT----~~~Yf~al~~~-~~~ 337 (929)
....-++..++ ...+..++++.|+|..+.. .++...+.+.|.- ......|+- ...|+...... ...
T Consensus 211 aWlw~l~et~r---~a~ts~~~~~~l~D~~p~~-----~~~~s~~~~y~~l~~d~p~l~~~~~v~~~~~~~~~g~~ve~d 282 (943)
T COG0383 211 AWLWPLDETER---KASTSFSLVMNLMDHYPVQ-----KFVQSAAALYNWLKPDVPFLFSRPAVEFEQWEIVGGMWVEED 282 (943)
T ss_pred HHhccHHHHHH---HHhhhhhheecccccChhh-----hhhhhHHHHHHHhcCccHHHhhcccccccceEEeeccccccc
Confidence 11111233333 3466778899999987765 6777777777742 233333444 34444433221 134
Q ss_pred CCCcccCCc-cccccCCCcee--eeeccchhhhHHHHHHhHHHH-HHHHHHh-------hh---ccccCCCchHHHHHHH
Q 002383 338 WPLKTDDFF-PYADRENAYWT--GYFTSRPALKGYVRTMSAYYL-AARQLEF-------FK---GRNEVGLSTDSLADAL 403 (929)
Q Consensus 338 ~p~~~gDff-py~~~~~~yWt--GyyTSRp~~K~~~R~~e~~L~-~ae~l~~-------l~---~~~~~~~~~~~l~~~l 403 (929)
.++.+||+. .-..+...|.+ ..-+||..+|..+-..+..|- .++.+.. ++ +..+|...+.-.|+.+
T Consensus 283 ~n~~sGEslsrq~~~gq~~~~~~f~~ssri~w~pd~fg~s~~Lpqil~p~gi~~f~t~klawn~tn~~Ph~~~~w~~~dg 362 (943)
T COG0383 283 LNTPSGESLSRQFLYGQRFFTEKFGASSRIYWKPDSFGFSGQLPQILEPLGIDVFVTTKLAWNDTNRFPHDLLRWRWKDG 362 (943)
T ss_pred CCccccchhhhhhhccceeeecccCccceeEeehhccccchhHHHHHHhhcchhhhccccchhhccCCChhHheeecccc
Confidence 678899976 22222112221 445899999988776666653 3444433 22 2344555666679999
Q ss_pred HhhhccccccCCcccchhHHHHHHHHH
Q 002383 404 ALVQHHDAVSGTEKQHVADDYAKRLSI 430 (929)
Q Consensus 404 ~~~QhHDaItGTs~~~V~~dy~~rl~~ 430 (929)
..++.||++|||+.+.|+.+...|...
T Consensus 363 ~e~~~hds~~~~~~d~v~~~~~~r~~~ 389 (943)
T COG0383 363 TENLAHDSICGCSSDPVHREMEYRFEK 389 (943)
T ss_pred cccceeecCCCCcccHHHHHHHhhhhh
Confidence 999999999999999999999888765
No 12
>PF03065 Glyco_hydro_57: Glycosyl hydrolase family 57; InterPro: IPR004300 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 57 GH57 from CAZY comprises enzymes with two known activities; alpha-amylase (3.2.1.1 from EC) and 4-alpha-glucanotransferase (2.4.1 from EC).; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process; PDB: 1K1X_B 1K1W_A 1K1Y_A 3N98_A 3N8T_A 3N92_A 1UFA_A 3P0B_A.
Probab=98.43 E-value=8e-07 Score=100.69 Aligned_cols=120 Identities=19% Similarity=0.231 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHhCCCCeEEEechhHHHHHHhccChHH------------------------------------------
Q 002383 71 QNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEV------------------------------------------ 108 (929)
Q Consensus 71 ~~il~~vi~~L~~~p~~kF~~~e~~~~~~ww~~~~p~~------------------------------------------ 108 (929)
.+.+--++..|++.|+.|++.+=...+.+|+++..+..
T Consensus 29 ~~~Y~pll~~l~~~~~~k~t~~lSp~LleqL~d~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~f~~~~~~~~l~~~~~~ 108 (360)
T PF03065_consen 29 TECYLPLLRLLERLPDFKLTFSLSPSLLEQLEDYAPQEYDQYLERSLARAELLREEKEFLLRANFTREDFERLLDFFREI 108 (360)
T ss_dssp HHTHHHHHHHHHHHHH--EEEEE-HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTSTCHHHHHHHHHHHHHHHHHHHT
T ss_pred HhhHHHHHHHHHhCcCccEEEEECHHHHHHHHhhhhhcccccccccccccccccccccccccccccccccccccccccch
Confidence 34444667777777767766654455668887777777
Q ss_pred ----HHHHHHHHHcCCEEEEcceeeecccCCCCh-HHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHHHHhhc
Q 002383 109 ----QNVVKQLVNSGQLELINGGMCMHDEAAPHY-IDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEV 183 (929)
Q Consensus 109 ----~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~-es~I~ql~~G~~~l~~~fG~~p~v~W~iD~FGhs~~~p~ll~~~~ 183 (929)
-+.+|+|+++|++|+++++|..+=-.+..- +++..|+..|.+.+++.||.+|+..|.|. .+.+..+..++ +++
T Consensus 109 ~~~ii~~~~~l~~~G~iEll~~~~~h~ilpl~~~~~d~~~Qi~~~~~~~~~~FG~~P~G~W~pE-~a~~~~l~~~l-~~~ 186 (360)
T PF03065_consen 109 IGDIIEAFRELAERGQIELLTSPYYHPILPLLPDPEDFRAQIEMGREYFKKHFGRRPRGFWLPE-CAYSPGLEEIL-AEA 186 (360)
T ss_dssp TT-HHHHHHHHHHTTSEEEEEE-TT-B-GGGSSHHHHHHHHHHHHHHHHHHHHSS--SBEE-GG-G-B-TTHHHHH-HHT
T ss_pred hhhhHHHHHHHHHCCCEEEEeCchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhCCCCCceECcc-cccCHHHHHHH-HHc
Confidence 899999999999999999998887777777 99999999999999999999999999998 78999999999 899
Q ss_pred CCcEEEEee
Q 002383 184 GFDFLFFAR 192 (929)
Q Consensus 184 G~~~~~~~R 192 (929)
||+++++.-
T Consensus 187 Gi~~~i~d~ 195 (360)
T PF03065_consen 187 GIRYTILDG 195 (360)
T ss_dssp T--EEEEEC
T ss_pred CCEEEEECc
Confidence 999999754
No 13
>COG1543 Uncharacterized conserved protein [Function unknown]
Probab=96.36 E-value=0.0087 Score=67.01 Aligned_cols=122 Identities=16% Similarity=0.236 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCe----------EEEechhHHHHHHhccChHHHHHHHHHHHcCCEEEEcceeeecccCCC-
Q 002383 68 ACVQNVLDSLIPALVADKNRK----------FIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAP- 136 (929)
Q Consensus 68 ~~v~~il~~vi~~L~~~p~~k----------F~~~e~~~~~~ww~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~- 136 (929)
.+..+-|+..++.+++.-.|. |..-+-.-...-|+..+...-+++|++.++|.+|+++.+.+-.---+-
T Consensus 75 ~ry~~~Le~~~el~e~e~~R~~~~~~~~~~~~~~~~~~~~~~~~e~~d~~ll~~f~~~~~~g~ieilts~athg~lPll~ 154 (504)
T COG1543 75 DRYLRYLEWKIELSEKEEKRYADQSLRELAEFYIPEFLNARGYWEQYDGNLLEAFKELQRSGGIEILTSAATHGYLPLLG 154 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCCceeeeehhhheehhhcC
Confidence 455666776666666543321 111111122467888899999999999999999999987654332222
Q ss_pred ChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHHHHhhcCCcEEEEe
Q 002383 137 HYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFA 191 (929)
Q Consensus 137 ~~es~I~ql~~G~~~l~~~fG~~p~v~W~iD~FGhs~~~p~ll~~~~G~~~~~~~ 191 (929)
.-|++=-|+..|.+-..++||..|+--|.|. =++.+.++.+| +..||++++.-
T Consensus 155 ~peAi~AQi~~g~~~ye~~fg~~P~GiWlPE-cay~pgie~~l-~~~Gi~yf~vd 207 (504)
T COG1543 155 GPEAIEAQILTGIELYEEHFGLAPKGIWLPE-CAYAPGIERIL-KDAGIEYFFVD 207 (504)
T ss_pred CchhhHHHHHHHHHHHHHHhCCCCCceechh-hccccchHHHH-HhcCceEEEec
Confidence 2488889999999988899999999999995 79999999999 89999999975
No 14
>PF01522 Polysacc_deac_1: Polysaccharide deacetylase; InterPro: IPR002509 This domain is found in polysaccharide deacetylase. This family of polysaccharide deacetylases includes NodB (nodulation protein B from Rhizobium) which is a chitooligosaccharide deacetylase []. It also includes chitin deacetylase from yeast [], and endoxylanases which hydrolyses glucosidic bonds in xylan [].; GO: 0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, 0005975 carbohydrate metabolic process; PDB: 2IW0_A 2CC0_B 2VYO_A 2J13_A 2C71_A 2C79_A 1W1A_1 1W1B_1 1W17_A 1NY1_B ....
Probab=95.58 E-value=0.098 Score=49.10 Aligned_cols=104 Identities=17% Similarity=0.278 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHhCCC-CeEEEechhHHHHHHhccChHHHHHHHHHHHcCCEEEEcceeeecccCCCChHHHHHHHHHHH
Q 002383 71 QNVLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGH 149 (929)
Q Consensus 71 ~~il~~vi~~L~~~p~-~kF~~~e~~~~~~ww~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~I~ql~~G~ 149 (929)
......+++.|+++.- ..|-.+.. +.. +..+.+++++++| +||.+-||.-.+-...+.+.+.+++..+.
T Consensus 17 ~~~~~~~~~~l~~~~i~at~fv~~~-~~~--------~~~~~l~~l~~~G-~ei~~H~~~H~~~~~~~~~~~~~ei~~~~ 86 (123)
T PF01522_consen 17 RDNYDRLLPLLKKYGIPATFFVIGS-WVE--------RYPDQLRELAAAG-HEIGNHGWSHPNLSTLSPEELRREIERSR 86 (123)
T ss_dssp HTHHHHHHHHHHHTT--EEEEE-HH-HHH--------HHHHHHHHHHHTT--EEEEE-SSSSCGGGS-HHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhcccceeeeeccc-ccc--------cccccchhHHHHH-HHHHhcCCcccccccCCHHHHHHHHHHHH
Confidence 4556778888888752 23333221 222 2267899999999 99999999999888889999999999999
Q ss_pred HHHHHHcCCCCceeeecCCCCC-chhhHHHHHhhcCCcE
Q 002383 150 RYIKEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFDF 187 (929)
Q Consensus 150 ~~l~~~fG~~p~v~W~iD~FGh-s~~~p~ll~~~~G~~~ 187 (929)
++|++.+|..|+. -.=|||. +..+-+++ +++||++
T Consensus 87 ~~l~~~~g~~~~~--f~~P~g~~~~~~~~~l-~~~G~~y 122 (123)
T PF01522_consen 87 EILEEITGRPPKG--FRYPFGSYDDNTLQAL-REAGYKY 122 (123)
T ss_dssp HHHHHHHSSEESE--EE-GGGEECHHHHHHH-HHTT-EE
T ss_pred HHHHHHhCCCCcE--EECCCCCCCHHHHHHH-HHcCCCc
Confidence 9999999994443 4457886 77778999 8999986
No 15
>COG1449 Alpha-amylase/alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=94.20 E-value=1.2 Score=53.66 Aligned_cols=98 Identities=19% Similarity=0.268 Sum_probs=79.4
Q ss_pred EEEechhHHHHHHhccChHHHHHHHHHHHcCCEEEEcceeeecccCCC----ChHHHHHHHHHHHHHHHHHcCCCCceee
Q 002383 89 FIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAP----HYIDMIDQTTLGHRYIKEQFNVTPRIGW 164 (929)
Q Consensus 89 F~~~e~~~~~~ww~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~----~~es~I~ql~~G~~~l~~~fG~~p~v~W 164 (929)
|++++..-+..+-....++.-+.+|++++.|+.|++.-.|--+=-.+- -++++++|+..+....++.||+.|+..|
T Consensus 162 ys~~g~~~il~~~~~~~~~vl~~~r~l~e~g~~e~~~~pyyHsl~pl~~d~gw~~d~~~qv~~~~~~~~elfG~~p~~~~ 241 (615)
T COG1449 162 YSLSGGETILEQQLDEAPRVLEAFRELAESGKVELTASPYYHSLIPLLADDGWYEDFKEQVMMSRELYKELFGVWPSGFW 241 (615)
T ss_pred eeccccHHHHHHHHHHHhhhHHHHHHHHhcCceEEEecccccccchhcccCCchHHHHHHHHHHHHHHHHHhCCCCcccc
Confidence 787774344455555578899999999999999999887743322222 4569999999999999999999999999
Q ss_pred ecCCCCCchhhHHHHHhhcCCcEE
Q 002383 165 QIDPFGHSAVQAYLLSAEVGFDFL 188 (929)
Q Consensus 165 ~iD~FGhs~~~p~ll~~~~G~~~~ 188 (929)
.+- +=.+.++..++ +.+|+...
T Consensus 242 ~tE-l~y~~~i~~~~-~e~G~~~~ 263 (615)
T COG1449 242 NTE-LAYNDQILEYF-EESGFSWI 263 (615)
T ss_pred Chh-hhccHHHHHHH-HHcCCccc
Confidence 987 67899999999 99999953
No 16
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=92.81 E-value=0.96 Score=46.26 Aligned_cols=101 Identities=14% Similarity=0.262 Sum_probs=75.7
Q ss_pred HHHHHHHHhCCCC-eEEEechhHHHHHHhccChHHHHHHHHHHHcCCEEEEcceeeecccCCCChHHHHHHHHHHHHHHH
Q 002383 75 DSLIPALVADKNR-KFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIK 153 (929)
Q Consensus 75 ~~vi~~L~~~p~~-kF~~~e~~~~~~ww~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~I~ql~~G~~~l~ 153 (929)
..+++.|+++.-+ .|-.... | .+..| +.+|+++++|- ||-+-+|.-++-..-+.+.+.+++..+.+.|+
T Consensus 22 ~~~l~~L~~~~ikaTfFv~g~-----~-~~~~~---~~~~~i~~~Gh-eig~Ht~~H~~~~~~~~~~~~~ei~~~~~~l~ 91 (191)
T TIGR02764 22 EPILDTLKEYDVKATFFLSGS-----W-AERHP---ELVKEIVKDGH-EIGSHGYRHKNYTTLEDEKIKKDILRAQEIIE 91 (191)
T ss_pred HHHHHHHHHcCCCEEEEeccH-----H-HHHCH---HHHHHHHhCCC-EEEECCcCCCCcccCCHHHHHHHHHHHHHHHH
Confidence 3567778777532 3433331 2 22344 57899999995 89999999888777889999999999999999
Q ss_pred HHcCCCCceeeecCCCCC-chhhHHHHHhhcCCcEE
Q 002383 154 EQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFDFL 188 (929)
Q Consensus 154 ~~fG~~p~v~W~iD~FGh-s~~~p~ll~~~~G~~~~ 188 (929)
+..|..|+ |--=|+|. +..+..++ ++.|+..+
T Consensus 92 ~~~g~~~~--~fr~P~G~~~~~~~~~l-~~~G~~~v 124 (191)
T TIGR02764 92 KLTGKKPT--LFRPPSGAFNKAVLKAA-ESLGYTVV 124 (191)
T ss_pred HHhCCCCC--EEECCCcCCCHHHHHHH-HHcCCeEE
Confidence 99998876 44557774 67778888 89999854
No 17
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=92.04 E-value=1.2 Score=46.85 Aligned_cols=100 Identities=15% Similarity=0.166 Sum_probs=76.4
Q ss_pred HHHHHHHhCCC-CeEEEechhHHHHHHhccChHHHHHHHHHHHcCCEEEEcceeeecccCCCChHHHHHHHHHHHHHHHH
Q 002383 76 SLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKE 154 (929)
Q Consensus 76 ~vi~~L~~~p~-~kF~~~e~~~~~~ww~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~I~ql~~G~~~l~~ 154 (929)
.+++.|+++-- ..|-..+. |. +..| +.+|+++++|- ||-+-+|.-++-...+.+.+.+++....+.|.+
T Consensus 54 ~lL~~L~~~~vkATFFv~G~-----~~-~~~p---~~ir~i~~~Gh-eIgnHt~~H~~~~~ls~~~~~~ei~~~~~~i~~ 123 (224)
T TIGR02884 54 KILDVLKEKKVPAAFFVTGH-----YI-KTQP---DLIKRMVDEGH-IVGNHSVHHPSLTAVNDEKFKEELTGVEEEFKK 123 (224)
T ss_pred HHHHHHHHcCCCeEEEeech-----hh-HHCH---HHHHHHHHcCC-EeeecCccCcCcccCCHHHHHHHHHHHHHHHHH
Confidence 46778887753 33444332 22 3344 67899999995 688999988877778899999999999999999
Q ss_pred HcCCC-CceeeecCCCCC-chhhHHHHHhhcCCcEE
Q 002383 155 QFNVT-PRIGWQIDPFGH-SAVQAYLLSAEVGFDFL 188 (929)
Q Consensus 155 ~fG~~-p~v~W~iD~FGh-s~~~p~ll~~~~G~~~~ 188 (929)
..|.. |+ |--=|+|. +..+..++ +++|+..+
T Consensus 124 ~~G~~~~~--~fR~P~G~~~~~~~~~l-~~~Gy~~v 156 (224)
T TIGR02884 124 VTGQKEMK--YFRPPRGVFSERTLAYT-KELGYYTV 156 (224)
T ss_pred HhCCCCCC--EEeCCCCCcCHHHHHHH-HHcCCcEE
Confidence 99976 44 66678994 77889999 89999854
No 18
>TIGR03006 pepcterm_polyde polysaccharide deactylase family protein, PEP-CTERM locus subfamily. Members of this protein family belong to the family of polysaccharide deacetylases (pfam01522). All are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria, and are found near the epsH homolog that is the putative exosortase gene. The highest scoring homologs below the trusted cutoff for this model are found in several species of Methanosarcina, an archaeal genus.
Probab=89.69 E-value=2.9 Score=45.15 Aligned_cols=111 Identities=16% Similarity=0.254 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHhCCC-CeEEEechhHHHHHHhccChHHHHHHHHHHHcCCEEEEcceeeecccCCCChHHHHHHHH
Q 002383 68 ACVQNVLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTT 146 (929)
Q Consensus 68 ~~v~~il~~vi~~L~~~p~-~kF~~~e~~~~~~ww~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~I~ql~ 146 (929)
.+|...+..+++.|+++-- .+|-..+ |+.+..| +.+|+++++| .||.+=||.-.+-..-+.+.+.+++.
T Consensus 24 ~rv~~nt~riL~lL~~~gikATFFv~g------~~~e~~p---~lir~i~~~G-hEIgsHg~sH~~l~~ls~ee~~~eI~ 93 (265)
T TIGR03006 24 CRVERNTDRILDLLDRHGVKATFFTLG------WVAERYP---ELVRRIVAAG-HELASHGYGHERVTTQTPEAFRADIR 93 (265)
T ss_pred chHHHhHHHHHHHHHHcCCcEEEEEec------cchhhCH---HHHHHHHHcC-CEeeeccccCcCchhCCHHHHHHHHH
Confidence 4566678889999998754 3444433 3344455 4599999999 69999999877766678899999999
Q ss_pred HHHHHHHHHcCCCCceeeecCC--CCC-chhhHHHHHhhcCCcEEEE
Q 002383 147 LGHRYIKEQFNVTPRIGWQIDP--FGH-SAVQAYLLSAEVGFDFLFF 190 (929)
Q Consensus 147 ~G~~~l~~~fG~~p~v~W~iD~--FGh-s~~~p~ll~~~~G~~~~~~ 190 (929)
...+.|++..|..|+ +|-.=. +|. +.....++ +++||.+..-
T Consensus 94 ~s~~~Le~itG~~~~-gfRaP~~s~~~~t~~a~~iL-~e~Gy~YdsS 138 (265)
T TIGR03006 94 RSKALLEDLSGQPVR-GYRAPSFSIGKKNLWALDVL-AEAGYRYSSS 138 (265)
T ss_pred HHHHHHHHHhCCCce-EEECCCCCCCCCcHHHHHHH-HHCCCEEEEe
Confidence 999999888888766 454322 333 23346899 8999997653
No 19
>TIGR03212 uraD_N-term-dom putative urate catabolism protein. This model represents a protein that is predominantly found just upstream of the UraD protein (OHCU decarboxylase) and in a number of instances as a N-terminal fusion with it. UraD itself catalyzes the last step in the catabolism of urate to allantoate. The function of this protein is presently unknown. It shows homology with the pfam01522 polysaccharide deacetylase domain family.
Probab=89.09 E-value=13 Score=40.89 Aligned_cols=111 Identities=18% Similarity=0.130 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHhCCC-CeEEEechhHHHHHHhccChHHHHHHHHHHHcCCEEEEcceeeecccCCCChHHHHHHHHHH
Q 002383 70 VQNVLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLG 148 (929)
Q Consensus 70 v~~il~~vi~~L~~~p~-~kF~~~e~~~~~~ww~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~I~ql~~G 148 (929)
.+.=+-.+++.|+++-- .+|-... |+.+.+|+ .+|+++++| .||.+=||...+-..-+.+...++|..+
T Consensus 75 ~rvG~~RiLdlL~~~gv~aTffv~g------~~~e~~P~---~v~~i~~~G-HEIg~Hg~~H~~~~~ls~~~e~~~i~~s 144 (297)
T TIGR03212 75 SRAGFWRLLRLFTERGIPVTVFGVA------MALARNPE---AVAAMKEAG-WEIASHGLRWIDYQDMDEAQEREHIAEA 144 (297)
T ss_pred chhCHHHHHHHHHHcCCCEEEEeEH------HHHHHCHH---HHHHHHHcC-CEEeeccccCcccccCCHHHHHHHHHHH
Confidence 34456667888888753 3354443 34455666 467777889 8999999987776667888999999999
Q ss_pred HHHHHHHcCCCCceeeecCCCCCchhhHHHHHhh-cCCcEEEEeecC
Q 002383 149 HRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAE-VGFDFLFFARID 194 (929)
Q Consensus 149 ~~~l~~~fG~~p~v~W~iD~FGhs~~~p~ll~~~-~G~~~~~~~Ri~ 194 (929)
.+-|++..|.+| .||.. -.+|..++.|+ ++ .||.+..-...+
T Consensus 145 ~~~i~~~tG~~P-~G~~~--~~~s~~T~~LL-~e~~Gf~Y~sd~~~d 187 (297)
T TIGR03212 145 IRLHTEVTGERP-LGWYT--GRTSPNTRRLV-AEEGGFLYDADSYAD 187 (297)
T ss_pred HHHHHHHhCCCC-ceEEC--CCCChhHHHHH-HHhcCceEeCchhhc
Confidence 998888888765 56753 35799999999 88 999987644433
No 20
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=88.43 E-value=4.9 Score=43.50 Aligned_cols=101 Identities=21% Similarity=0.348 Sum_probs=77.7
Q ss_pred HHHHHHHHHhCCC-CeEEEechhHHHHHHhccChHHHHHHHHHHHcCCEEEEcceeeecccCCCChHHHHHHHHHHHHHH
Q 002383 74 LDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYI 152 (929)
Q Consensus 74 l~~vi~~L~~~p~-~kF~~~e~~~~~~ww~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~I~ql~~G~~~l 152 (929)
...+++.|+++-- .+|-..+. |. +.+| +.+|+++++|- ||-+=+|.-++-..-+.+.+.++|..+.+.|
T Consensus 100 t~~iL~iLkk~~vkATFFv~G~-----~i-~~~p---~l~k~i~~~Gh-eIGnHT~sH~~l~~ls~~~~~~Ei~~~~~~i 169 (268)
T TIGR02873 100 LPEILQILKKHDVKATFFLEGK-----WV-KENS---QLAKMIVEQGH-EIGNHAYNHPDMATLSKEEIYDQINQTNEII 169 (268)
T ss_pred HHHHHHHHHHCCCCEEEEeehH-----hh-hHCH---HHHHHHHHCCC-EEEecCCcCCCcccCCHHHHHHHHHHHHHHH
Confidence 3467888887753 34544432 32 3344 45788899995 7999999988888888999999999999999
Q ss_pred HHHcCCCCceeeecCCCCC-chhhHHHHHhhcCCcE
Q 002383 153 KEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFDF 187 (929)
Q Consensus 153 ~~~fG~~p~v~W~iD~FGh-s~~~p~ll~~~~G~~~ 187 (929)
++..|..|+ |--=|+|. +..+..++ +++|+..
T Consensus 170 ~~~~G~~p~--~fRpP~G~~n~~~~~~l-~~~G~~~ 202 (268)
T TIGR02873 170 EATIGVTPK--WFAPPSGSFNDNVVQIA-ADLQMGT 202 (268)
T ss_pred HHHhCCCCC--EEECCCCCCCHHHHHHH-HHCCCeE
Confidence 999999887 66668987 57788888 8999864
No 21
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=86.16 E-value=20 Score=43.82 Aligned_cols=151 Identities=17% Similarity=0.305 Sum_probs=96.8
Q ss_pred HHHHHHHHcCCEEEEcceeeecccC--------------------CCChH-------HHHHHHHHHHHHHHHHcCCCCce
Q 002383 110 NVVKQLVNSGQLELINGGMCMHDEA--------------------APHYI-------DMIDQTTLGHRYIKEQFNVTPRI 162 (929)
Q Consensus 110 ~~vk~lV~~GrlE~vgGgwv~~Dea--------------------~~~~e-------s~I~ql~~G~~~l~~~fG~~p~v 162 (929)
+.||+++++|-+||-+=+|..|.-. ...|| .+.+.+....+.|++..|..|++
T Consensus 168 eqIreM~~sGlvEIGSHT~~sH~~l~anp~g~~~pa~~~r~~~~~~~~yEs~~e~~~ri~~DL~~s~~~Ie~~tG~~p~~ 247 (671)
T PRK14582 168 QQVREVARSRLVEIASHTWNSHYGIQANPQGSLLPAAVNRAYFTDHARYETAAEYRERIRLDAVKMTEYIRTKAGKNPRV 247 (671)
T ss_pred HHHHHHHhCCCeEEEcCCchhccccccccccccccchhcccccccccccccHHHHHHHHHHHHHHHHHHHHHHhCCCCcE
Confidence 6899999999999988888655311 11222 26678999999999999998885
Q ss_pred eeecCCCCC-chhhHHHHHhhcCCcEEEEeecChHhHHHhhhcCceeEEEeeCCCCCCCCceeeeeCCCCCCCCCCCCCc
Q 002383 163 GWQIDPFGH-SAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYF 241 (929)
Q Consensus 163 ~W~iD~FGh-s~~~p~ll~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~~~d~~~~gs~i~th~~~~~Y~~p~~~f~f 241 (929)
..=|||+ +.....+. +++||+..+..+-.... .+.. |.-| . +.
T Consensus 248 --FayPyG~~n~~~~~ia-keaGY~~afT~~~G~~~----------------------~~~~--------~~Lp-R-i~- 291 (671)
T PRK14582 248 --WVWPYGEANGIALEEL-KKLGYDMAFTLESGLAN----------------------ASQL--------DSIP-R-VL- 291 (671)
T ss_pred --EecCCCCCCHHHHHHH-HHCCCeEEEEeCCCCCC----------------------CCCc--------Cccc-e-EE-
Confidence 5668995 67788999 89999988765422110 0000 1111 0 00
Q ss_pred ccCCCCCCccCCccccCCChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCC-cchHHHHHHHHHHHHHHhcCC
Q 002383 242 EVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKY-QYAHTWFRQMDKFIHYVNQDG 315 (929)
Q Consensus 242 ~~~~~~~p~~~~~~i~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y-~~a~~~~~n~~~li~~~N~~~ 315 (929)
+..++ . ++.|...+... ......+++-.+-|+-| .++..+-++++++|+.+.+.+
T Consensus 292 --------I~~~~-----s----l~~f~~~v~~~--~~~~~~r~~h~dld~vyd~dp~qq~~~L~~lLdrlk~~G 347 (671)
T PRK14582 292 --------IANNP-----S----LKEFAQQIITV--QEKSPQRVMHIDLDYVYDENPQQQDRNIDVLIQRVKDMQ 347 (671)
T ss_pred --------ecCCC-----C----HHHHHHHHhcc--cCCCCEEEEEeccccccCCCHHHHHHHHHHHHHHHHHcC
Confidence 00001 1 23455444322 12455667777778888 566667789999999998765
No 22
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=82.78 E-value=7.2 Score=47.50 Aligned_cols=81 Identities=17% Similarity=0.272 Sum_probs=63.0
Q ss_pred HHHHHHHHHcCCEEEEcceeeeccc--------------------CCCChHH-------HHHHHHHHHHHHHHHcCCCCc
Q 002383 109 QNVVKQLVNSGQLELINGGMCMHDE--------------------AAPHYID-------MIDQTTLGHRYIKEQFNVTPR 161 (929)
Q Consensus 109 ~~~vk~lV~~GrlE~vgGgwv~~De--------------------a~~~~es-------~I~ql~~G~~~l~~~fG~~p~ 161 (929)
.+.||+++++|-+||-+=+|..+.- ....+|+ +-+.+....+.|++..|..|+
T Consensus 167 W~qIrEM~~sGLvEIGSHT~sHh~~~~~np~g~~~pa~~~~~y~~~~~~yEs~~~~~~rl~~Di~~s~~~Ie~~lG~~p~ 246 (672)
T PRK14581 167 WKQITEMSKSGLVEIGAHTYASHYGVIANPQGNTEPAAANLQYDPKTKQYETVEAFKQRMEKDVALITQRIVQATGKQPR 246 (672)
T ss_pred HHHHHHHHHCCCcEEEcCCcccccccccCccccccchhhhccccccccccccHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 3689999999999998989877631 1223443 556678888989999999888
Q ss_pred eeeecCCCCC-chhhHHHHHhhcCCcEEEEee
Q 002383 162 IGWQIDPFGH-SAVQAYLLSAEVGFDFLFFAR 192 (929)
Q Consensus 162 v~W~iD~FGh-s~~~p~ll~~~~G~~~~~~~R 192 (929)
. ..=|||+ +...-.++ +++||+..+..+
T Consensus 247 ~--FayPyG~yn~~~~~ia-k~aGy~~afTt~ 275 (672)
T PRK14581 247 V--WVWPYGAPNGTVLNIL-RQHGYQLAMTLD 275 (672)
T ss_pred E--EEcCCCCcCHHHHHHH-HHCCCcEEEECC
Confidence 4 5578995 78889999 899999888755
No 23
>PF07481 DUF1521: Domain of Unknown Function (DUF1521); InterPro: IPR011086 This domain of unknown function is found in a limited set of Bradyrhizobium proteins. There appears to be a periodic -DG- motif in the domain.
Probab=76.44 E-value=24 Score=34.39 Aligned_cols=95 Identities=11% Similarity=0.091 Sum_probs=54.0
Q ss_pred CceEEc-cCeEEEEEECCCCeEEEEEecCCCcEEEEEEEEEEeecCCCCCCCCCCcceEEccCCCCccCCCCccEEEEEE
Q 002383 595 DTIEVG-PGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTYPIEPEGQLSFTILR 673 (929)
Q Consensus 595 ~~~~ie-N~~~~v~~~~~~G~l~si~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sgaYiF~P~~~~~~~~~~~~~i~v~~ 673 (929)
+...|+ ++.|+|+++.+++.+. |++|++|....+--+-.+.....| --+++|.-. ..+.+.....|.|..
T Consensus 8 gkati~lgd~Y~I~~~e~ds~~~-itnk~tG~~TriwGDPHvd~~Gdg------~~~fDFk~~--~tf~L~DGTKItV~T 78 (171)
T PF07481_consen 8 GKATIDLGDGYTIEANEKDSEWT-ITNKQTGETTRIWGDPHVDADGDG------KTDFDFKGD--MTFQLDDGTKITVDT 78 (171)
T ss_pred CeeEEecCCceEEEecCCcceEE-EecCCCCcEeEEeCCCccccCCCc------ccceeecCc--eEEEeCCCCEEEEee
Confidence 445677 8889999996678888 999999998876544333221111 136777632 234444444555432
Q ss_pred cCceEEEEEEEcCeEEEEEEEecCCCceEEE
Q 002383 674 GPLLDEVHQRINPWIYQVTRVYKGKDHAEIE 704 (929)
Q Consensus 674 G~l~~~v~~~~~~~~~~~irLy~~~~~ie~e 704 (929)
=|.-. +..+...+.+.++...+.++
T Consensus 79 ~p~gn------g~T~askLtIt~Gd~~~~V~ 103 (171)
T PF07481_consen 79 VPWGN------GMTYASKLTITNGDNAWQVE 103 (171)
T ss_pred eecCC------CcEEeeeEEEEcCCceEEEe
Confidence 22111 12233445556666655554
No 24
>PRK15394 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD; Provisional
Probab=66.06 E-value=2.1e+02 Score=31.46 Aligned_cols=80 Identities=11% Similarity=0.027 Sum_probs=59.5
Q ss_pred HHHHHHHHcCCEEEEcceeeec----ccCCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHHHHhhcCC
Q 002383 110 NVVKQLVNSGQLELINGGMCMH----DEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGF 185 (929)
Q Consensus 110 ~~vk~lV~~GrlE~vgGgwv~~----Dea~~~~es~I~ql~~G~~~l~~~fG~~p~v~W~iD~FGhs~~~p~ll~~~~G~ 185 (929)
+.+|+.+++ -|+.+=||.-. ....-+.+.+.++|..+.+-|++..|..|+ +|.+=-+-.+..+..++ +++||
T Consensus 92 ~lvr~i~~~--HEIG~Hg~~H~~wq~~~~~ls~~e~~~eI~ra~~~Le~itG~~p~-g~raPgw~~~~~tl~ll-~e~Gf 167 (296)
T PRK15394 92 DIIREAAKA--HEVGLHAWDHHAWQAWSGVWSRQQLIEQIARGVDALEEIIGQPVT-CSAAAGWRADQRVVEAK-EAFGF 167 (296)
T ss_pred HHHHHHHhc--CEehhcccCccchhcccccCCHHHHHHHHHHHHHHHHHHhCCCCC-EEeCCCccCCHHHHHHH-HHcCC
Confidence 356777777 99988888754 234457788999999999988888888764 45554445678889999 89999
Q ss_pred cEEEEeec
Q 002383 186 DFLFFARI 193 (929)
Q Consensus 186 ~~~~~~Ri 193 (929)
.+---.|.
T Consensus 168 ~Y~Ss~~~ 175 (296)
T PRK15394 168 RYNSDCRG 175 (296)
T ss_pred eeecCCCC
Confidence 98744443
No 25
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=64.19 E-value=8.1 Score=31.46 Aligned_cols=23 Identities=39% Similarity=0.647 Sum_probs=17.3
Q ss_pred hHHHHHHHHHHHcCCEEEEccee
Q 002383 106 EEVQNVVKQLVNSGQLELINGGM 128 (929)
Q Consensus 106 p~~~~~vk~lV~~GrlE~vgGgw 128 (929)
++.++-+-++|++|+||++||-|
T Consensus 36 ~eL~~fL~~lv~e~~L~~~~G~Y 58 (60)
T PF08672_consen 36 EELQEFLDRLVEEGKLECSGGSY 58 (60)
T ss_dssp HHHHHHHHHHHHTTSEE--TTEE
T ss_pred HHHHHHHHHHHHCCcEEecCCEE
Confidence 45566678999999999999877
No 26
>TIGR03826 YvyF flagellar operon protein TIGR03826. This gene is found in flagellar operons of Bacillus-related organisms. Its function has not been determined and an official gene symbol has not been assigned, although the gene is designated yvyF in B. subtilus. A tentative assignment as a regulator is suggested in the NCBI record GI:16080597.
Probab=43.51 E-value=19 Score=34.64 Aligned_cols=52 Identities=13% Similarity=0.223 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEechhHHHHHHhccChHHHHHHHHHHHcCCEEEEcc
Q 002383 68 ACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELING 126 (929)
Q Consensus 68 ~~v~~il~~vi~~L~~~p~~kF~~~e~~~~~~ww~~~~p~~~~~vk~lV~~GrlE~vgG 126 (929)
.....-+..|-+.|.++|.+.-+..|++ +...-..+.|.++|++|||++...
T Consensus 26 ~~~e~~f~kV~~yLr~~p~~~ati~eV~-------e~tgVs~~~I~~~IreGRL~~~~~ 77 (137)
T TIGR03826 26 EEEEREFEKVYKFLRKHENRQATVSEIV-------EETGVSEKLILKFIREGRLQLKHF 77 (137)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHH-------HHHCcCHHHHHHHHHcCCeeccCC
Confidence 3456778889999999999776655543 334445678999999999998763
No 27
>PF12395 DUF3658: Protein of unknown function ; InterPro: IPR022123 This domain family is found in bacteria, and is approximately 110 amino acids in length. The family is found in association with PF08874 from PFAM. There are two completely conserved residues (D and R) that may be functionally important.
Probab=30.10 E-value=81 Score=29.16 Aligned_cols=69 Identities=16% Similarity=0.260 Sum_probs=45.3
Q ss_pred EEEEEecccCCCccchhhhheeecCCcchhhHHHHHHHHHHHHHHHhCCCCeEEEechhHHHHHHhccChHHHHHHHHHH
Q 002383 37 NVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLV 116 (929)
Q Consensus 37 ~VhlVpHSH~D~gWl~T~~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~~kF~~~e~~~~~~ww~~~~p~~~~~vk~lV 116 (929)
+|.=+|=.|.|.--+.....-| .++.+++-.|+..+.... ..|| ..-++++||
T Consensus 40 ~i~sv~ed~yD~~Il~~~~~~~---------~~~arvIg~vl~~~~~~i------------~D~f------~~~Ri~~Li 92 (111)
T PF12395_consen 40 KIVSVPEDYYDDFILEQAPDEF---------QKAARVIGEVLGHSDQGI------------GDWF------LEYRIRELI 92 (111)
T ss_pred eEEecChHHhhHHHHhcCCccc---------cHHHHHHHHHHHhcCcCC------------ChHH------HHHHHHHHH
Confidence 3555666777777777554444 456777888777752221 1333 345899999
Q ss_pred HcCCEEEEcceeeecc
Q 002383 117 NSGQLELINGGMCMHD 132 (929)
Q Consensus 117 ~~GrlE~vgGgwv~~D 132 (929)
++|+||+.|..-.|.+
T Consensus 93 ~~G~le~~g~~~~mr~ 108 (111)
T PF12395_consen 93 SQGVLEIKGDPKDMRH 108 (111)
T ss_pred HCCCEEEecCCCcccc
Confidence 9999999887655544
No 28
>TIGR03593 yidC_nterm membrane protein insertase, YidC/Oxa1 family, N-terminal domain. Essentially all bacteria have a member of the YidC family, whose C-terminal domain is modeled by TIGR03592. The two copies are found in endospore-forming bacteria such as Bacillus subtilis appear redundant during vegetative growth, although the member designated spoIIIJ (stage III sporulation protein J) has a distinct role in spore formation. YidC, its mitochondrial homolog Oxa1, and its chloroplast homolog direct insertion into the bacterial/organellar inner (or only) membrane. This model describes an N-terminal sequence region, including a large periplasmic domain lacking in YidC members from Gram-positive species. The multifunctional YidC protein acts both with and independently of the Sec system.
Probab=29.93 E-value=2.9e+02 Score=31.28 Aligned_cols=29 Identities=21% Similarity=0.099 Sum_probs=24.2
Q ss_pred CCceEEccCeEEEEEECCCCeEEEEEecC
Q 002383 594 NDTIEVGPGNLKLLYSGKRAKLMRYINSK 622 (929)
Q Consensus 594 ~~~~~ieN~~~~v~~~~~~G~l~si~dk~ 622 (929)
...++|+|+.++++|+...|.|.++.-|+
T Consensus 73 ~~~i~v~td~~~~~is~~Gg~i~~~~Lk~ 101 (366)
T TIGR03593 73 AKRITVKTDVLRASISTKGGDIDSLELKK 101 (366)
T ss_pred CCeEEEECCeEEEEEeCCCceeeeecccc
Confidence 34689999999999997778999887664
No 29
>PRK10148 hypothetical protein; Provisional
Probab=28.37 E-value=21 Score=34.77 Aligned_cols=17 Identities=24% Similarity=0.233 Sum_probs=14.5
Q ss_pred CceeeecCCCCCchhhH
Q 002383 160 PRIGWQIDPFGHSAVQA 176 (929)
Q Consensus 160 p~v~W~iD~FGhs~~~p 176 (929)
++.||..|+||++|++-
T Consensus 123 ~~~g~v~D~fGi~W~l~ 139 (147)
T PRK10148 123 HGFGKVTDKFGVPWMIN 139 (147)
T ss_pred hccEEEECCCCCEEEEE
Confidence 46799999999999764
No 30
>PF10074 DUF2285: Uncharacterized conserved protein (DUF2285); InterPro: IPR018754 This entry contains uncharacterised proteins of unknown function.
Probab=25.18 E-value=14 Score=33.87 Aligned_cols=29 Identities=24% Similarity=0.590 Sum_probs=25.0
Q ss_pred HHHHhccChHHHHHHHHHHHcCCEEEEcceee
Q 002383 98 QRWWRDQSEEVQNVVKQLVNSGQLELINGGMC 129 (929)
Q Consensus 98 ~~ww~~~~p~~~~~vk~lV~~GrlE~vgGgwv 129 (929)
..||+. ...+.+++.||+.|++ ++.|||-
T Consensus 74 ~~~W~~--~~~R~~~~rll~~a~~-l~~gGYr 102 (106)
T PF10074_consen 74 ADEWKD--SSLRRRVRRLLRRARA-LMEGGYR 102 (106)
T ss_pred cccccC--hHHHHHHHHHHHHHHH-HHHhhHH
Confidence 367876 7789999999999999 8999983
No 31
>COG0726 CDA1 Predicted xylanase/chitin deacetylase [Carbohydrate transport and metabolism]
Probab=22.98 E-value=7.1e+02 Score=25.84 Aligned_cols=114 Identities=17% Similarity=0.206 Sum_probs=79.1
Q ss_pred ccchhhhheeecCCcchhhHHHHHHHHHHHHHHHhCCC-CeEEEechhHHHHHHhccChHHHHHHHHHHHcCCEEEEcce
Q 002383 49 GWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGG 127 (929)
Q Consensus 49 gWl~T~~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~-~kF~~~e~~~~~~ww~~~~p~~~~~vk~lV~~GrlE~vgGg 127 (929)
--.-|||+.+. .. ....+++.|+++-- ..|-..+ .|-+..|+..+++.+ +|.- +-+=+
T Consensus 66 ~v~lTFDDg~~--------~~---~~~~il~iL~k~~i~ATfFv~g------~~i~~~p~~~~~~~~---~Ghe-ig~H~ 124 (267)
T COG0726 66 AVALTFDDGPL--------DG---NTPRILPLLKKYGIKATFFVVG------SWIERNPDLVKRIAE---AGHE-IGNHG 124 (267)
T ss_pred eEEEEeecCCC--------CC---CcHHHHHHHHHcCCceEEEEeh------HhhHHCHHHHHHHHh---ccCe-ehhCc
Confidence 34557887774 21 56677888887753 3455554 455556665544444 6665 77888
Q ss_pred eeecccCCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCC-chhhHHHHHhhcCCc
Q 002383 128 MCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFD 186 (929)
Q Consensus 128 wv~~Dea~~~~es~I~ql~~G~~~l~~~fG~~p~v~W~iD~FGh-s~~~p~ll~~~~G~~ 186 (929)
|--.+....+.+.+..++...+..+.+..|..|+ |.--|.|. +...-.+. +..|+.
T Consensus 125 ~~h~~~~~~~~~~~~~~i~~~~~~l~~~~g~~~~--~~r~p~g~~~~~~~~~~-~~~g~~ 181 (267)
T COG0726 125 YDHPDLQDLSLEELGAEIARAHDILKKITGGRPR--GFRPPYGSYNESSLALA-RRLGYR 181 (267)
T ss_pred ccCCCcccCCHHHHHHHHHHHHHHHHHHhCCCCc--eEECCCCccCHHHHHHH-HhCCCc
Confidence 8777777788888888999999999999998833 45566675 46667777 788886
No 32
>PF13289 SIR2_2: SIR2-like domain
Probab=21.79 E-value=4.5e+02 Score=24.62 Aligned_cols=84 Identities=14% Similarity=0.250 Sum_probs=54.1
Q ss_pred eEEEechhHHHHHHhccChHHHHHHHHHHHcCCEEEEcceeeecccCCCChHHHHHHHHHHHHHHHHHcCCCCceeeecC
Q 002383 88 KFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQID 167 (929)
Q Consensus 88 kF~~~e~~~~~~ww~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~I~ql~~G~~~l~~~fG~~p~v~W~iD 167 (929)
.++..+..|. +.+ ...+...+.++.+.++.-+-|| ||.+.|. +...+++ ++.+..|..++-.|.+.
T Consensus 58 ~~vlt~~~y~-~~~-~~~~~~~~~l~~~l~~~~~lfi--Gys~~D~---~i~~~l~-------~~~~~~~~~~~~~~~v~ 123 (143)
T PF13289_consen 58 SIVLTEDDYE-EYY-SSNPWFPNFLRSLLRSKTLLFI--GYSFNDP---DIRQLLR-------SALENSGKSRPRHYIVI 123 (143)
T ss_pred CEEEcHHHHH-HHh-hhHHHHHHHHHHHHcCCCEEEE--EECCCCH---HHHHHHH-------HHHHhccCCCccEEEEE
Confidence 3455555553 344 3467788889999988888788 6667775 2333332 35566666455556666
Q ss_pred CCCCchhhHHHHHhhcCCc
Q 002383 168 PFGHSAVQAYLLSAEVGFD 186 (929)
Q Consensus 168 ~FGhs~~~p~ll~~~~G~~ 186 (929)
+-.-......++ +..||+
T Consensus 124 ~~~~~~~~~~~~-~~~~i~ 141 (143)
T PF13289_consen 124 PDPDDENEREFL-EKYGIE 141 (143)
T ss_pred cCCchHHHHHHH-HHcCCE
Confidence 666567777788 788886
No 33
>PHA02097 hypothetical protein
Probab=21.76 E-value=1.1e+02 Score=23.79 Aligned_cols=30 Identities=20% Similarity=0.431 Sum_probs=25.3
Q ss_pred CCCCceeEEEeEecCCCcEEEEeeehhccc
Q 002383 892 VLPDNVALITLQELDSGKILLRLAHLYERT 921 (929)
Q Consensus 892 ~lP~~vhlltl~~~~~~~~llRl~h~~~~~ 921 (929)
+|..|-|.+|..--.++-+|+|+.|.|.++
T Consensus 4 e~~rd~~~vt~amntp~gv~iri~~tf~~~ 33 (59)
T PHA02097 4 ELDRDSQVVTSAMNTPGGVIIRIAHTFDVS 33 (59)
T ss_pred EcccCCceEEEEeeCCCcEEEEEEeEEeec
Confidence 566788999998877889999999999764
No 34
>PRK13654 magnesium-protoporphyrin IX monomethyl ester cyclase; Provisional
Probab=20.58 E-value=1.3e+02 Score=33.24 Aligned_cols=49 Identities=22% Similarity=0.417 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCe-EEEechhHHHHHHhccChHHHHHHHHHHHc
Q 002383 68 ACVQNVLDSLIPALVADKNRK-FIYVEQAFFQRWWRDQSEEVQNVVKQLVNS 118 (929)
Q Consensus 68 ~~v~~il~~vi~~L~~~p~~k-F~~~e~~~~~~ww~~~~p~~~~~vk~lV~~ 118 (929)
..++.=++.++++++.|+++. |+-+|. |.+.|+..+|+.|+.+......
T Consensus 41 s~~~~e~~A~l~E~r~DyNr~HF~R~~e--f~~~~d~l~~e~r~~FidFLer 90 (355)
T PRK13654 41 SPNREELDAILEEMRADYNRHHFVRDEE--FDQDWDHLDPETRKEFIDFLER 90 (355)
T ss_pred chhHHHHHHHHHHHHhCcccccccCChh--hhhchhhCCHHHHHHHHHHHHH
Confidence 345677899999999999998 998764 5678999999999998887543
No 35
>TIGR03092 SASP_sspI small, acid-soluble spore protein I. This protein family is restricted to a subset of endospore-forming bacteria such as Bacillus subtilis, all of which are in the Firmicutes (low-GC Gram-positive) lineage. It is a minor SASP (small, acid-soluble spore protein) designated SspI. The gene in Bacillus subtilis previously was designated ysfA.
Probab=20.51 E-value=1.1e+02 Score=25.20 Aligned_cols=25 Identities=16% Similarity=0.547 Sum_probs=21.5
Q ss_pred hHHHHHHhccChHHHHHHHHHHHcC
Q 002383 95 AFFQRWWRDQSEEVQNVVKQLVNSG 119 (929)
Q Consensus 95 ~~~~~ww~~~~p~~~~~vk~lV~~G 119 (929)
.+|+.||+..+++.|+.+-+.+.+|
T Consensus 39 VlFE~~W~~~~~~ek~~m~~~l~~~ 63 (65)
T TIGR03092 39 VLFEAIWKHANEQEKDEMLETLEQG 63 (65)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 5779999999999999988877765
No 36
>PF06044 DRP: Dam-replacing family; InterPro: IPR010324 Dam-replacing protein (DRP) is a restriction endonuclease that is flanked by pseudo-transposable small repeat elements. The replacement of Dam-methylase by DRP allows phase variation through slippage-like mechanisms in several pathogenic isolates of Neisseria meningitidis [].; PDB: 4ESJ_A.
Probab=20.13 E-value=1.7e+02 Score=30.78 Aligned_cols=59 Identities=12% Similarity=0.183 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEechhHHHHHHhccChH-------HHHHHHHHHHcCCEEEEccee
Q 002383 70 VQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEE-------VQNVVKQLVNSGQLELINGGM 128 (929)
Q Consensus 70 v~~il~~vi~~L~~~p~~kF~~~e~~~~~~ww~~~~p~-------~~~~vk~lV~~GrlE~vgGgw 128 (929)
.+--+-.++.-+++=|..-|+.+++.-|+.-.....|. .|+.++.|=..|-|||+|-|-
T Consensus 185 ~rGWlldi~~cid~i~~~~FtL~diY~Fe~~L~~~~P~N~~Ik~KIRQqLQ~LRD~g~IeFl~rG~ 250 (254)
T PF06044_consen 185 SRGWLLDIMKCIDKIPKNEFTLDDIYAFEDELQIKYPNNNHIKAKIRQQLQILRDKGIIEFLGRGR 250 (254)
T ss_dssp HHHHHHHHHHHHHHS-SSEEEHHHHHTTHHHHHHHSTT-S-HHHHHHHHHHHHHHTTSEEE-STTE
T ss_pred ccchHHHHHHHHHhcCccceeHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHhhCCceEEecCCc
Confidence 34455567777778888899999998888888777663 455555666799999999774
Done!