Your job contains 1 sequence.
>002384
MSKAEHMGVSPSQVTSSTRDHSCLKQTTPEQMCKFCAECIHSEPLESKSLLGSEAVENEP
RETSIPNSEKLQAFCGDVPDSSFTDHLAPPSEDMRKSTQTNKASCSQQNTSEQKHGTELM
HNEQSEQKHQLCYQIVFDKPQATSLVDNATLQPVSKDVSKSSQTGNRQALDFLSGNRCNE
LDVDCVHSEPLNQKHQLGSEIIQNEPAVNIARLPSDGVEENLQTISEDLTKVCPVEPSQS
PPRDANKSCQAGEISCLQQSSSEQTPEFTPGISSHEPSVVNYKLGSQLEQTELGETSAGE
LGASLELVVKSSIEQLKQPEVPITIPSTKTSATKHLQSSSDLMEKKSCLEQSETPPNYVA
NNSACLGRKGKRATKSLKNNYTVRSLIGSDRVLRSRSGERPIPPESSINLADVNSIGERK
QKKRNKIRRKKIVADEYSRIRTHLRYLLNRINYEQNLIDAYSSEGWKGLSVEKLKPEKEL
QRATSEILRRKLKIRDLFQRLDSLCAGGFPKSLFDSEGQIDSEDIYCAKCGSKDLSADND
IILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCIDLVNELQGTRLFITD
NWEKVFPEAAAGHNQDPNFGLASDDSDDNEYDPDGSATDEQDEGDESSSDGSSSDDSDFT
STSDEVEAPADDKTYLGLSSEDSEDDEYNPDAPELDDKVTQESSSSGSDFTSDSEDLAAV
LEDNRSSGNDEGAASPLGHSNGQRYKDGGNNESLNNELLSIIKPGQDGAAPVYGKRSSER
LDYKKLYDETYGNVPYDSSDDESWSDDGGPRKRTKSTKEGSSASPDGKTPVIRRRKSTKA
AKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQV
IWLSADAFLLYCEIYNGHHKDGNNNFIAV
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002384
(929 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2090694 - symbol:HAT3.1 species:3702 "Arabidop... 776 6.2e-91 2
TAIR|locus:2005538 - symbol:PRHA "pathogenesis related ho... 487 9.2e-46 3
RGD|1311245 - symbol:Rsf1 "remodeling and spacing factor ... 139 1.2e-11 3
ZFIN|ZDB-GENE-091204-206 - symbol:si:dkey-21n12.3 "si:dke... 125 3.1e-07 3
RGD|708360 - symbol:Phrf1 "PHD and ring finger domains 1"... 139 1.8e-06 2
UNIPROTKB|Q63625 - symbol:Phrf1 "PHD and RING finger doma... 139 1.8e-06 2
UNIPROTKB|F1STY8 - symbol:RSF1 "Uncharacterized protein" ... 142 2.0e-06 3
UNIPROTKB|I3LTW3 - symbol:I3LTW3 "Uncharacterized protein... 121 2.2e-06 1
MGI|MGI:2444959 - symbol:Mll3 "myeloid/lymphoid or mixed-... 117 3.1e-06 4
UNIPROTKB|F1P8R2 - symbol:RSF1 "Uncharacterized protein" ... 144 3.8e-06 3
UNIPROTKB|J9P712 - symbol:PHRF1 "Uncharacterized protein"... 140 4.2e-06 2
UNIPROTKB|F1PXY6 - symbol:PHRF1 "Uncharacterized protein"... 140 4.3e-06 2
UNIPROTKB|I3LU11 - symbol:PHRF1 "Uncharacterized protein"... 143 1.2e-05 3
ZFIN|ZDB-GENE-040426-2039 - symbol:uhrf1 "ubiquitin-like,... 137 1.3e-05 2
UNIPROTKB|H0YCN2 - symbol:RSF1 "Remodeling and spacing fa... 137 2.9e-05 2
RGD|1309990 - symbol:Uhrf2 "ubiquitin-like with PHD and r... 135 2.9e-05 2
UNIPROTKB|A7E320 - symbol:UHRF1 "E3 ubiquitin-protein lig... 136 3.4e-05 1
UNIPROTKB|H0YDG9 - symbol:RSF1 "Remodeling and spacing fa... 133 3.4e-05 2
UNIPROTKB|F6UA42 - symbol:uhrf1 "E3 ubiquitin-protein lig... 129 5.2e-05 3
UNIPROTKB|Q96T23 - symbol:RSF1 "Remodeling and spacing fa... 137 6.3e-05 3
MGI|MGI:1923718 - symbol:Uhrf2 "ubiquitin-like, containin... 138 7.2e-05 2
UNIPROTKB|E9PJ24 - symbol:PHRF1 "PHD and RING finger doma... 135 7.5e-05 2
UNIPROTKB|F8WEF5 - symbol:PHRF1 "PHD and RING finger doma... 135 7.5e-05 2
TAIR|locus:2089606 - symbol:AT3G14740 species:3702 "Arabi... 127 8.7e-05 1
UNIPROTKB|F1P4F7 - symbol:UHRF1 "Uncharacterized protein"... 132 9.7e-05 2
FB|FBgn0033015 - symbol:d4 "d4" species:7227 "Drosophila ... 129 0.00010 1
MGI|MGI:2141847 - symbol:Phrf1 "PHD and ring finger domai... 137 0.00012 2
UNIPROTKB|F1MLK1 - symbol:RSF1 "Uncharacterized protein" ... 145 0.00015 3
UNIPROTKB|Q96PU4 - symbol:UHRF2 "E3 ubiquitin-protein lig... 130 0.00015 1
UNIPROTKB|B6CHA3 - symbol:uhrf1 "E3 ubiquitin-protein lig... 130 0.00018 2
UNIPROTKB|A8DZJ1 - symbol:baz1b "Tyrosine-protein kinase ... 123 0.00025 2
UNIPROTKB|F1PJN4 - symbol:UHRF1 "Uncharacterized protein"... 128 0.00025 1
UNIPROTKB|B3KV94 - symbol:JARID1B "cDNA FLJ16281 fis, clo... 130 0.00027 1
MGI|MGI:1338889 - symbol:Uhrf1 "ubiquitin-like, containin... 127 0.00031 1
ZFIN|ZDB-GENE-041010-202 - symbol:baz2a "bromodomain adja... 119 0.00032 2
UNIPROTKB|Q9UGL1 - symbol:KDM5B "Lysine-specific demethyl... 130 0.00033 1
UNIPROTKB|F1S4N3 - symbol:KDM5B "Uncharacterized protein"... 128 0.00039 2
UNIPROTKB|F1PJS3 - symbol:KDM5B "Uncharacterized protein"... 129 0.00040 2
UNIPROTKB|Q96T88 - symbol:UHRF1 "E3 ubiquitin-protein lig... 129 0.00049 2
RGD|1595855 - symbol:Uhrf1 "ubiquitin-like with PHD and r... 125 0.00051 1
UNIPROTKB|F1MUR2 - symbol:KDM5B "Uncharacterized protein"... 128 0.00051 2
ZFIN|ZDB-GENE-030131-624 - symbol:phrf1 "PHD and ring fin... 131 0.00052 2
RGD|1565602 - symbol:Kdm5b "lysine (K)-specific demethyla... 128 0.00055 1
UNIPROTKB|K7GSR9 - symbol:MTF2 "Uncharacterized protein" ... 109 0.00056 1
UNIPROTKB|Q9P1Y6 - symbol:PHRF1 "PHD and RING finger doma... 135 0.00060 3
TAIR|locus:2144841 - symbol:ATXR5 "AT5G09790" species:370... 120 0.00062 1
MGI|MGI:1922855 - symbol:Kdm5b "lysine (K)-specific demet... 127 0.00071 2
UNIPROTKB|F1MFX7 - symbol:F1MFX7 "Uncharacterized protein... 133 0.00084 2
UNIPROTKB|F1NFV8 - symbol:BAZ1A "Uncharacterized protein"... 115 0.00087 4
UNIPROTKB|E2RE69 - symbol:BAZ1A "Uncharacterized protein"... 115 0.00088 4
UNIPROTKB|J9P748 - symbol:BAZ1A "Uncharacterized protein"... 115 0.00096 4
>TAIR|locus:2090694 [details] [associations]
symbol:HAT3.1 species:3702 "Arabidopsis thaliana"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS;RCA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0051276 "chromosome
organization" evidence=RCA] [GO:0003677 "DNA binding" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001965 InterPro:IPR009057
InterPro:IPR019787 Pfam:PF00046 Pfam:PF00628 PROSITE:PS00027
PROSITE:PS50016 PROSITE:PS50071 SMART:SM00249 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AB025624 EMBL:X69512
EMBL:AK117105 EMBL:BT005965 IPI:IPI00537420 PIR:S31437
RefSeq:NP_188582.1 UniGene:At.19694 ProteinModelPortal:Q04996
SMR:Q04996 IntAct:Q04996 STRING:Q04996 PaxDb:Q04996 PRIDE:Q04996
EnsemblPlants:AT3G19510.1 GeneID:821485 KEGG:ath:AT3G19510
TAIR:At3g19510 eggNOG:NOG79337 HOGENOM:HOG000112850
InParanoid:Q04996 OMA:KEGECET PhylomeDB:Q04996
ProtClustDB:CLSN2915378 Genevestigator:Q04996 Uniprot:Q04996
Length = 723
Score = 776 (278.2 bits), Expect = 6.2e-91, Sum P(2) = 6.2e-91
Identities = 163/297 (54%), Positives = 197/297 (66%)
Query: 317 KQPEVPITIPSTKTSATKHLQSSSDLMEKKSCLEQSETPPNYVANNSAC-LGRKGKRATK 375
+Q P T+ + TK S +L+ C Q E A+ S+ LG G+R
Sbjct: 71 EQKPTPQTVKKDSNTNTKFSGSHRELVIGLPCRGQFEIHNRSRASTSSKRLGGGGER--- 127
Query: 376 SLKNNYTVRSLIGSDRVLRSRSGERPIPPESSINLADVNSIGEXXXXXXXXXXXXXIVAD 435
N S R RS+ P SS+ +A+ +G D
Sbjct: 128 ----NVLFAS---HKRAQRSKEDAGP----SSV-VANSTPVGRPKKKNKTMNKGQVREDD 175
Query: 436 EYSRIRTHLRYLLNRINYEQNLIDAYSSEGWKGLSVEKLKPEKELQRATSEILRRKLKIR 495
EY+RI+ LRY LNRINYEQ+LIDAYS EGWKG S+EK++PEKEL+RAT EILRRKLKIR
Sbjct: 176 EYTRIKKKLRYFLNRINYEQSLIDAYSLEGWKGSSLEKIRPEKELERATKEILRRKLKIR 235
Query: 496 DLFQRLDSLCA-GGFPKSLFDSEGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQ 554
DLFQ LD+LCA G P+SLFD++G+I SEDI+CAKCGSKDLS DNDIILCDG CDRGFHQ
Sbjct: 236 DLFQHLDTLCAEGSLPESLFDTDGEISSEDIFCAKCGSKDLSVDNDIILCDGFCDRGFHQ 295
Query: 555 YCLEPPLLKEDIPPDDEGWLCPGCDCKVDCIDLVNELQGTRLFITDNWEKVFPEAAA 611
YCLEPPL KEDIPPDDEGWLCPGCDCK D +DL+N+ GT+ ++D+WEK+FPEAAA
Sbjct: 296 YCLEPPLRKEDIPPDDEGWLCPGCDCKDDSLDLLNDSLGTKFSVSDSWEKIFPEAAA 352
Score = 150 (57.9 bits), Expect = 6.2e-91, Sum P(2) = 6.2e-91
Identities = 63/234 (26%), Positives = 88/234 (37%)
Query: 673 KTYLGLSSEDSEDDEYNPDAPELDDKVTQEXXXXXXXXXXXXXXLAAVLEDNRSSGNDEG 732
K + L S+DSEDD+Y+PDAP DD +E + ++ D
Sbjct: 427 KDVMALPSDDSEDDDYDPDAPTCDDD--KESSNSDCTSDTEDLETSFKGDETNQQAEDTP 484
Query: 733 AASPLGHSNGQRYKDGGXXXXXXXXXXXIIKPGQDGAAPVYGKRSSERLDYKKLYDETYG 792
P G Q D DG A V +R+ ERLDYKKLYDE Y
Sbjct: 485 LEDP-GRQTSQLQGDAILESDVGL---------DDGPAGVSRRRNVERLDYKKLYDEEYD 534
Query: 793 NVPYXXXXXXXXXXXGGPRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTP 852
NVP K + KE S + +G T + K+ N ++T
Sbjct: 535 NVPTSSSDDDDWD------KTARMGKEDSESEDEGDTVPL---------KQSSNAEDHTS 579
Query: 853 KRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRTSYR--KLGEEVTQVIWLS 904
K+ R K D + EG G G ++S K + TQ +++S
Sbjct: 580 KKLIR-KSKRADKKDTLEMPQEGPGENGGSGEIEKSSSSACKQTDPKTQRLYIS 632
Score = 58 (25.5 bits), Expect = 3.2e-81, Sum P(2) = 3.2e-81
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 678 LSSEDSEDDEYNPDAPELDDKVTQE 702
L S+DS+D+EY+PD L+D E
Sbjct: 365 LPSDDSDDEEYDPDC--LNDNENDE 387
>TAIR|locus:2005538 [details] [associations]
symbol:PRHA "pathogenesis related homeodomain protein A"
species:3702 "Arabidopsis thaliana" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001356 InterPro:IPR001965
InterPro:IPR009057 InterPro:IPR019787 Pfam:PF00046 Pfam:PF00628
PROSITE:PS50016 PROSITE:PS50071 SMART:SM00249 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006952 GO:GO:0009733 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AL050352 EMBL:AL161575 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:L21991 EMBL:U48864
IPI:IPI00540289 PIR:T08555 RefSeq:NP_194723.1 UniGene:At.19983
ProteinModelPortal:P48785 SMR:P48785 IntAct:P48785 STRING:P48785
PaxDb:P48785 PRIDE:P48785 EnsemblPlants:AT4G29940.1 GeneID:829117
KEGG:ath:AT4G29940 TAIR:At4g29940 eggNOG:NOG311547
HOGENOM:HOG000115692 InParanoid:P48785 OMA:MTEESHE PhylomeDB:P48785
ProtClustDB:CLSN2716723 Genevestigator:P48785 GermOnline:AT4G29940
Uniprot:P48785
Length = 796
Score = 487 (176.5 bits), Expect = 9.2e-46, Sum P(3) = 9.2e-46
Identities = 87/181 (48%), Positives = 122/181 (67%)
Query: 432 IVADEYSRIRTHLRYLLNRINYEQNLIDAYSSEGWKGLSVEKLKPEKELQRATSEILRRK 491
+ D+ R++ RYLL ++ +QNLIDAY++EGWKG S EK++P+KEL+RA EIL K
Sbjct: 97 VEVDDSLRLQRRTRYLLIKMKMQQNLIDAYATEGWKGQSREKIRPDKELERARKEILNCK 156
Query: 492 LKIRDLFQRLDSLCA-GGFPKSLFDSEGQIDSEDIYCAKCGSKDLSADNDIILCDGACDR 550
L +RD ++LD L + G + + S+G I + I+CA+C S++ DNDIILCDG C+R
Sbjct: 157 LGLRDAIRQLDLLSSVGSMEEKVIASDGSIHHDHIFCAECNSREAFPDNDIILCDGTCNR 216
Query: 551 GFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCIDLVNELQGTRLFITDNWEKVFPEAA 610
FHQ CL+PPL E IPP D+GW C CDCK++ ID +N GT + NW+ +F E A
Sbjct: 217 AFHQKCLDPPLETESIPPGDQGWFCKFCDCKIEIIDTMNAQIGTHFPVDSNWQDIFNEEA 276
Query: 611 A 611
+
Sbjct: 277 S 277
Score = 52 (23.4 bits), Expect = 9.2e-46, Sum P(3) = 9.2e-46
Identities = 15/53 (28%), Positives = 20/53 (37%)
Query: 772 VYGKRSSERLDYKKLYDETYGNVPYXXXXXXXXXXXGGPRKRTKSTKEGSSAS 824
V G R +DY +LY E +G GP R K +E + S
Sbjct: 368 VCGPRQRRTVDYTQLYYEMFGK-DAVLQEQGSEDEDWGPNDRRKRKRESDAGS 419
Score = 50 (22.7 bits), Expect = 9.2e-46, Sum P(3) = 9.2e-46
Identities = 8/15 (53%), Positives = 13/15 (86%)
Query: 680 SEDSEDDEYNPDAPE 694
S+DS+DD+Y+P+ E
Sbjct: 294 SDDSKDDDYDPEMRE 308
Score = 40 (19.1 bits), Expect = 3.1e-43, Sum P(2) = 3.1e-43
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 666 VEAPADDKTYLGLSSEDSEDDEYNPDAPELDD 697
V+ P D KT G S E N + E+ D
Sbjct: 517 VKQPGDSKTVSGGDSGPEAVMENNTETNEVQD 548
>RGD|1311245 [details] [associations]
symbol:Rsf1 "remodeling and spacing factor 1" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006334
"nucleosome assembly" evidence=IEA;ISO] [GO:0006338 "chromatin
remodeling" evidence=IEA;ISO] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA;ISO] [GO:0031213 "RSF complex" evidence=IEA;ISO]
[GO:0042393 "histone binding" evidence=IEA;ISO] [GO:0043392
"negative regulation of DNA binding" evidence=IEA;ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0050434
"positive regulation of viral transcription" evidence=IEA;ISO]
[GO:0016887 "ATPase activity" evidence=ISO] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
RGD:1311245 GO:GO:0045892 GO:GO:0045893 GO:GO:0046872 GO:GO:0008270
GO:GO:0006352 GO:GO:0006338 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016584 GO:GO:0006334 GO:GO:0050434
GO:GO:0043392 GO:GO:0031213 OrthoDB:EOG441QBQ
GeneTree:ENSGT00530000064411 IPI:IPI00368441
Ensembl:ENSRNOT00000037050 UCSC:RGD:1311245 Uniprot:D3ZGQ8
Length = 1444
Score = 139 (54.0 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 32/76 (42%), Positives = 41/76 (53%)
Query: 517 EGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCP 576
E + +D C KCG + I+LCD +CD G+H CL PPL+ I PD E W CP
Sbjct: 888 EAVLPDDDEPCKKCGLPN--HPELILLCD-SCDSGYHTACLRPPLM---IIPDGE-WFCP 940
Query: 577 GCDCKVDCIDLVNELQ 592
C K+ C L +LQ
Sbjct: 941 PCQHKLLCEKLEEQLQ 956
Score = 115 (45.5 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 83/413 (20%), Positives = 166/413 (40%)
Query: 3 KAEHMGVSPSQVTSSTRDHSCLKQTTPEQMCKFCAECIHSEPLESKSLLGSEAVENEPRE 62
+A+ V P + S L PE+ F + S+ + KS +E ++N+ ++
Sbjct: 329 EAKECRVDPKDLKGSLER---LGSQEPER-ADFGSNIKSSQDITEKSTEETEKLKND-QQ 383
Query: 63 TSIPNSEKLQAFCGDVPDSSFTDHLA----PPSEDMRKSTQTNKASCSQQNT-SEQKH-G 116
IP +K + D DS HL P E ++ + + +C + +T S H G
Sbjct: 384 AKIP-LKKREIKLSDDFDSPVKGHLCKSATPTKECLKDDVKQEEETCKRVSTISALSHEG 442
Query: 117 TELMHNEQSEQKHQLCYQIVFDKPQATSLVDNATLQPVSKDVSKSSQTGNRQALD-FLSG 175
+LM+ E ++ K + + Q ++++ P +KD S + + L+ L+
Sbjct: 443 KQLMNGEMNDDKVTASLKTEQLETQLCHTKEDSSSIP-AKDGSAGLEGSGVECLNSVLTS 501
Query: 176 NRCNELDVDCVHSEPLN------QKH-QLGSEIIQNEPAVNIARLPSDGVEENLQTISED 228
+ +EL+ + + ++ + H Q G P +++ PS+ + +
Sbjct: 502 TKTSELEKEVSLGKAVDGSASDVESHSQKGRGEEPGPPNMDMPLEPSEKTTDLSLKSTLS 561
Query: 229 LTKVCPVEPSQSPPRDANKSCQAGEISCLQQSSSEQTPEFTPGISSHEPSVVNYKLGSQL 288
T+ CP + + P+ ++ AG I CL++ + I P + + L
Sbjct: 562 ATESCPTKIEEKAPKSKGENHTAG-IECLEKVEKAKKTSVDKDIQRLSP-IPEEVVRGPL 619
Query: 289 EQTELGETSAGELGASLELVVKSSIEQLKQPEVPITIPSTKTSATKHLQSSS-DLMEKKS 347
E E G E LE+ + E+ + + S +S + L+++S D++ + S
Sbjct: 620 ESEESGLCEVAETPLPLEMT--GAKEKQTSEKKGVDCLSRGSSEGQSLENASPDILRENS 677
Query: 348 CLEQSETPPNYVANNSACLGRKGKRATK-SLKNNYTVRSLIGSDRVLRSRSGE 399
E S + +N+ G + TK S++ N L+ S + E
Sbjct: 678 --ESSRVEMAKL-DNAQTSGVEDTSQTKGSVQKNKCKYKLVSEGNSTASENTE 727
Score = 48 (22.0 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 19/73 (26%), Positives = 33/73 (45%)
Query: 833 RRRKSTKAAKEKLN-----ETENTPK--RRGRPKLNTEDSNISPAKSHEGCSTPGSRG-- 883
RRR+S + K ++N E++ + K RRG+ +S ++S E + S
Sbjct: 1208 RRRRSRRNQKRQINYKEDSESDGSQKSLRRGKEIRRVHKRRLSSSESEESYMSKNSEDDE 1267
Query: 884 --RRHRTSYRKLG 894
+ + S RK G
Sbjct: 1268 LTKESKRSIRKRG 1280
Score = 38 (18.4 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 834 RRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHR 887
RR K K+K ++ + + ++E S+ S S E T R RR++
Sbjct: 1164 RRLRRKTQKKKYSDDDEEEEESEENSRDSE-SDFSDDFSDEFVETRRRRSRRNQ 1216
>ZFIN|ZDB-GENE-091204-206 [details] [associations]
symbol:si:dkey-21n12.3 "si:dkey-21n12.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 SMART:SM00384 ZFIN:ZDB-GENE-091204-206 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR018501 PROSITE:PS50827 EMBL:AL929053
GeneTree:ENSGT00530000064411 IPI:IPI00497346
Ensembl:ENSDART00000077161 Bgee:F1Q6Y6 Uniprot:F1Q6Y6
Length = 1369
Score = 125 (49.1 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 32/80 (40%), Positives = 41/80 (51%)
Query: 512 SLFDSEGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDE 571
S SE ++D C CG + I+LCD +CD G+H CL PPL+ I PD E
Sbjct: 842 STSSSEDDTPNDDP-CKHCGLPN--HPELILLCD-SCDSGYHTACLRPPLM---IIPDGE 894
Query: 572 GWLCPGCDCKVDCIDLVNEL 591
W CP C K+ C L +L
Sbjct: 895 -WFCPPCQHKLLCDRLEEQL 913
Score = 73 (30.8 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 61/310 (19%), Positives = 129/310 (41%)
Query: 42 SEPLESKSLLGSEAVENEPRETSIPNSEKLQAFCGDVPDSSFTDHLAPPS-EDMRKSTQT 100
S+ + +SLL +A E +E S+ ++ + + + S D+ + S E++ K T +
Sbjct: 409 SKESKGESLL-KDAPSKESKEESLKDAPSKEE-SKESKEESLKDNPSKESKEEILKDTPS 466
Query: 101 --NKASCSQQNTSEQKHGTELMHNEQSEQKHQLCYQIVFDKPQATSLVDNATLQPV-SKD 157
+K + S++ G L E K L + K + SL D + SKD
Sbjct: 467 KESKQESLKDTPSKESKGESLKDAPSKESKESLLKESKESKEE--SLKDPPGKESAKSKD 524
Query: 158 VSKSSQTGNRQALDFLSGNRCNELDVDCVHSEPLNQKHQLGSEIIQNEPAVNIARLPSDG 217
K+ +++L+ +S + + D +P ++K L + I NE ++++ D
Sbjct: 525 -DKTKALSKKESLEDISNEKSAKSLKDDATKDP-SKKESL--QDISNESTKSVSK--DDA 578
Query: 218 VEENL-QTISEDLTKVCPVEPSQSPPRDANKSCQAGEISCLQQSSSEQTPEFTPGISSHE 276
+++ + S+DL ++ K A ++S + S + P P S
Sbjct: 579 AQDHFNKESSKDLAS-----------EESGKDQPAKDLS--NEESIKNPPNQKP--SKDL 623
Query: 277 PSVVNYKLGSQLEQTELGETSAGELGASLELVVKSSIEQLKQPEVPITIPSTKTSATKHL 336
+ K+ + E ++ S E+ + E K S+++ T ++ AT
Sbjct: 624 AKKESQKVIPESESQKV--VSEKEIPKTAEETTKESVKEANATVDNCTSKQSERDATSEE 681
Query: 337 QSSSDLMEKK 346
+ +S ++++K
Sbjct: 682 REASGVVQEK 691
Score = 66 (28.3 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 64/287 (22%), Positives = 124/287 (43%)
Query: 2 SKAEHM-GVSPSQVTSSTRDHSCLKQTTPEQMCKFCAECIHSEPLESKSLLGSEAVEN-E 59
SK E + G S+ S +D K++ E + K S+ + +SL + + E+ E
Sbjct: 401 SKGESLKGSKESKGESLLKDAPS-KESKEESL-KDAPSKEESKESKEESLKDNPSKESKE 458
Query: 60 PRETSIPNSEKLQAFCGDVPDS-SFTDHLAP-PSEDMRKSTQTNKASCSQQNTSEQKHGT 117
P+ E Q D P S + L PS++ ++S ++ S++ + + G
Sbjct: 459 EILKDTPSKESKQESLKDTPSKESKGESLKDAPSKESKESL-LKESKESKEESLKDPPGK 517
Query: 118 ELMHNEQSEQK---HQLCYQIVFDKPQATSLVDNATLQPVSKDVSK--SSQTGNRQALDF 172
E ++ + K + + + ++ A SL D+AT P K+ + S+++ + D
Sbjct: 518 ESAKSKDDKTKALSKKESLEDISNEKSAKSLKDDATKDPSKKESLQDISNESTKSVSKDD 577
Query: 173 LSGNRCN-ELDVDCVHSEP-LNQ--KHQLGSEIIQN----EPAVNIARLPSDGV---EEN 221
+ + N E D E +Q K E I+N +P+ ++A+ S V E+
Sbjct: 578 AAQDHFNKESSKDLASEESGKDQPAKDLSNEESIKNPPNQKPSKDLAKKESQKVIPESES 637
Query: 222 LQTISEDLTKVCPVEPSQSPPRDANKSCQAGEISCL-QQSSSEQTPE 267
+ +SE K P + ++ +++ K A +C +QS + T E
Sbjct: 638 QKVVSE---KEIP-KTAEETTKESVKEANATVDNCTSKQSERDATSE 680
Score = 62 (26.9 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 77/374 (20%), Positives = 147/374 (39%)
Query: 42 SEPLESKSLLGSE-AVENEPRETSIPNSEKLQAFCGDVPDSSFTDHLAPPSEDMRKSTQT 100
+E ++ K+L ++ A++N+ + IP ++ D +S AP E + ++
Sbjct: 330 TEEVKRKTLEETQRALKND-HQAKIPLKKREMKLSEDFDSNSAGLRNAPVKESNIPNKES 388
Query: 101 NKASCSQQNTSEQKHGTELMHNEQSEQKHQLCYQIVFDKPQATSLVDNATLQPVSKDVSK 160
+ S + E K G L +++S+ + ++ D P S ++ P SK+ SK
Sbjct: 389 KEDSLKDAQSKESK-GESLKGSKESKGE-----SLLKDAPSKESKEESLKDAP-SKEESK 441
Query: 161 SSQTGNRQALDFLSGNRCNELDVDCVHSEPLNQKHQ--LGSEIIQNEPAVNIARLPSDGV 218
S+ + L N E + + P + Q L + ++ PS
Sbjct: 442 ESKE------ESLKDNPSKESKEEILKDTPSKESKQESLKDTPSKESKGESLKDAPSKES 495
Query: 219 EENLQTIS----EDLTKVCPVEPSQSPPRDANKSCQAGEISCLQQSSSEQTPEFTPGISS 274
+E+L S E+ K P + S D K+ E L+ S+E++ + ++
Sbjct: 496 KESLLKESKESKEESLKDPPGKESAKSKDDKTKALSKKE--SLEDISNEKSAKSLKDDAT 553
Query: 275 HEPSVVNYKLGSQLEQTELGETSAGELGASLELVVKSSIEQLKQPEVPITIPSTKTSATK 334
+PS K S + + S + A+ + K S + L E P+ S +
Sbjct: 554 KDPS----KKESLQDISNESTKSVSKDDAAQDHFNKESSKDLASEESGKDQPAKDLSNEE 609
Query: 335 HLQS------SSDLMEKKSCLEQSETPPNYVANNSACLGRKGKRATK-SLKN-NYTVRSL 386
+++ S DL +K+S E+ V + + + + TK S+K N TV +
Sbjct: 610 SIKNPPNQKPSKDLAKKESQKVIPESESQKVVSEKE-IPKTAEETTKESVKEANATVDNC 668
Query: 387 IGSDRVLRSRSGER 400
+ S ER
Sbjct: 669 TSKQSERDATSEER 682
Score = 60 (26.2 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 28/160 (17%), Positives = 52/160 (32%)
Query: 719 AVLED-NRSSGNDEGAASPLGHSNGQRYKDGGXXXXXXXXXXXIIKPGQDGAAPVYGKRS 777
A+ ED + G G + + G R KD +P + AA +R
Sbjct: 993 AIEEDIKEAEGGGAGRGKDMANITGHRGKDMSTILQEEGKENG--RPQRTSAAQKKKRRR 1050
Query: 778 SERLDYKKLYDETYGNVPYXXXXXXXXXXXGGPRKRTKSTK---EGSSASPDGKTPVIRR 834
LD DE + ++ E S D + + R
Sbjct: 1051 LNDLDSDSTVDEEESEDEFRLSDSSEEEFVASENAESEDNAPSLEDSDFDSDAQGSRVNR 1110
Query: 835 RKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHE 874
K ++ ++ + P+RR RP+ +++ + + E
Sbjct: 1111 ANRRKTSRSRIRRKQ-PPRRRRRPRGYSDEEELETDEEEE 1149
Score = 55 (24.4 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 57/263 (21%), Positives = 105/263 (39%)
Query: 236 EPSQSPPRDANKSCQAGE-ISCLQQSSSEQTPEFTPGISSHEPSVVNYKLGSQLEQTELG 294
E + +DA GE + ++S E + P S E S+ + S+ E E
Sbjct: 387 ESKEDSLKDAQSKESKGESLKGSKESKGESLLKDAPSKESKEESLKDAP--SKEESKESK 444
Query: 295 ETSAGELGA--SLELVVKSS-IEQLKQPEVPITIPSTKTSATKHLQSSSDLMEKKSCLEQ 351
E S + + S E ++K + ++ KQ + T PS K S + L+ + K+S L++
Sbjct: 445 EESLKDNPSKESKEEILKDTPSKESKQESLKDT-PS-KESKGESLKDAPSKESKESLLKE 502
Query: 352 S-ETPPNYVANNSACLGRKGKR-ATKSLKNNYTVRSLIGSDRVLRSRSGERPIPPESSIN 409
S E+ + + K K TK+L ++ I +++ +S + P +
Sbjct: 503 SKESKEESLKDPPGKESAKSKDDKTKALSKKESLED-ISNEKSAKSLKDDATKDPSKKES 561
Query: 410 LADVN-----SIG-EXXXXXXXXXXXXXIVADEYSRIRTHLRYLLNRINYEQNLIDAYSS 463
L D++ S+ + +A E S + L N + + N + S
Sbjct: 562 LQDISNESTKSVSKDDAAQDHFNKESSKDLASEESGKDQPAKDLSNEESIK-NPPNQKPS 620
Query: 464 EGWKGLSVEKLKPEKELQRATSE 486
+ +K+ PE E Q+ SE
Sbjct: 621 KDLAKKESQKVIPESESQKVVSE 643
Score = 52 (23.4 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 819 EGSSASPDGKTPVIRRRKSTKAAKEKLN--ETE---------NTPKRRGRPKLNTEDSNI 867
EGSS D V R R+S ++ K+++N ET N K++ R +L++ DS
Sbjct: 1157 EGSSEFSDSDLDV-RCRRSYRSRKQEVNYCETSDSDGSQASTNKDKKKKRRRLSSSDSEA 1215
Query: 868 S--PAKSHE 874
S A+S E
Sbjct: 1216 SFQSAESEE 1224
Score = 50 (22.7 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 810 PRK-RTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNIS 868
P+K R S++E S + + RRR+S + ++ +R R ++N DS+ S
Sbjct: 1229 PKKIRADSSEEEESRKRRRRLSLKRRRESEDDDDDDDSDESEEEERPVRKRVNRIDSDES 1288
Query: 869 PAK 871
+K
Sbjct: 1289 ASK 1291
Score = 50 (22.7 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 23/80 (28%), Positives = 35/80 (43%)
Query: 816 STKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEG 875
S +GS AS + RRR S+ ++ E+ + R +PK DS+ + E
Sbjct: 1188 SDSDGSQASTNKDKKKKRRRLSSSDSEASFQSAESEEEER-KPKKIRADSS----EEEE- 1241
Query: 876 CSTPGSRGRRHRTSYRKLGE 895
SR RR R S ++ E
Sbjct: 1242 -----SRKRRRRLSLKRRRE 1256
Score = 42 (19.8 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKL 860
+KR + + S AS RK K + +E E + KRR R L
Sbjct: 1203 KKRRRLSSSDSEASFQSAESEEEERKPKKIRADS-SEEEESRKRRRRLSL 1251
>RGD|708360 [details] [associations]
symbol:Phrf1 "PHD and ring finger domains 1" species:10116
"Rattus norvegicus" [GO:0006366 "transcription from RNA polymerase
II promoter" evidence=IMP] [GO:0006397 "mRNA processing"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IMP]
[GO:0070063 "RNA polymerase binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 RGD:708360 Prosite:PS00518
GO:GO:0019904 GO:GO:0046872 GO:GO:0008270 GO:GO:0006397
GO:GO:0006366 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AC118351 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM OrthoDB:EOG4MSD0F
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 EMBL:U49057
IPI:IPI00211009 IPI:IPI00915115 PIR:T31422 RefSeq:NP_620793.1
UniGene:Rn.10530 ProteinModelPortal:Q63625 STRING:Q63625
PRIDE:Q63625 Ensembl:ENSRNOT00000023376 Ensembl:ENSRNOT00000051755
GeneID:245925 KEGG:rno:245925 UCSC:RGD:708360 InParanoid:Q63625
NextBio:623186 ArrayExpress:Q63625 Genevestigator:Q63625
Uniprot:Q63625
Length = 1685
Score = 139 (54.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 515 DSEGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWL 574
D E + + + +C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W
Sbjct: 180 DEEAE-EEDPTFCEVCGRSD--REDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WF 231
Query: 575 CPGCDCKVDCID 586
CP +C V +D
Sbjct: 232 CP--ECAVPGVD 241
Score = 66 (28.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 22/84 (26%), Positives = 37/84 (44%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPA 870
R+ + S G SP RR K + ++E++++ E+ + R R + + SP+
Sbjct: 1122 RRHSGSRSRGRDGSPHSSLERDRRHKHRERSRERMDKKESMTRSRERRRWRSR----SPS 1177
Query: 871 KSHEGCSTPGSRGRRHRTSYRKLG 894
H P SR +H S K G
Sbjct: 1178 VEHR-TRRPHSR-EKHPHSPEKKG 1199
Score = 51 (23.0 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 21/71 (29%), Positives = 29/71 (40%)
Query: 829 TPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRR-HR 887
T V +R + + ++ + K GR K + S KS G + R R R
Sbjct: 327 TAVYQRPLTPRVPAKRKRKAGRRKKVLGRKKTRSRSS----VKSKSGGTRAKKRQHRVRR 382
Query: 888 TSYRKLGEEVT 898
T RKL EVT
Sbjct: 383 TKGRKLKNEVT 393
Score = 51 (23.0 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 21/78 (26%), Positives = 29/78 (37%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNE-TENTPKRRGRPKLNTEDSNISP 869
R R K+ K+ A +T R S ++ TE KR R K + S+
Sbjct: 1011 RSRKKTKKKKKVAREHQRTRSSTRSGSRDRTSRSVSPFTEEHTKRH-RAKTKSRRSSSDR 1069
Query: 870 AKSHEGCSTPGSRGRRHR 887
A S + R R HR
Sbjct: 1070 ASSQDRAKRRKDRDREHR 1087
Score = 46 (21.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 18/77 (23%), Positives = 29/77 (37%)
Query: 810 PRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISP 869
P+ T E ++S T R RK TK K+ E + T + ++SP
Sbjct: 988 PQITTHRIVEFRASSRSRSTSSSRSRKKTKKKKKVAREHQRTRSSTRSGSRDRTSRSVSP 1047
Query: 870 -AKSHEGCSTPGSRGRR 885
+ H ++ RR
Sbjct: 1048 FTEEHTKRHRAKTKSRR 1064
>UNIPROTKB|Q63625 [details] [associations]
symbol:Phrf1 "PHD and RING finger domain-containing protein
1" species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 RGD:708360
Prosite:PS00518 GO:GO:0019904 GO:GO:0046872 GO:GO:0008270
GO:GO:0006397 GO:GO:0006366 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AC118351 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM OrthoDB:EOG4MSD0F
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 EMBL:U49057
IPI:IPI00211009 IPI:IPI00915115 PIR:T31422 RefSeq:NP_620793.1
UniGene:Rn.10530 ProteinModelPortal:Q63625 STRING:Q63625
PRIDE:Q63625 Ensembl:ENSRNOT00000023376 Ensembl:ENSRNOT00000051755
GeneID:245925 KEGG:rno:245925 UCSC:RGD:708360 InParanoid:Q63625
NextBio:623186 ArrayExpress:Q63625 Genevestigator:Q63625
Uniprot:Q63625
Length = 1685
Score = 139 (54.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 515 DSEGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWL 574
D E + + + +C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W
Sbjct: 180 DEEAE-EEDPTFCEVCGRSD--REDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WF 231
Query: 575 CPGCDCKVDCID 586
CP +C V +D
Sbjct: 232 CP--ECAVPGVD 241
Score = 66 (28.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 22/84 (26%), Positives = 37/84 (44%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPA 870
R+ + S G SP RR K + ++E++++ E+ + R R + + SP+
Sbjct: 1122 RRHSGSRSRGRDGSPHSSLERDRRHKHRERSRERMDKKESMTRSRERRRWRSR----SPS 1177
Query: 871 KSHEGCSTPGSRGRRHRTSYRKLG 894
H P SR +H S K G
Sbjct: 1178 VEHR-TRRPHSR-EKHPHSPEKKG 1199
Score = 51 (23.0 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 21/71 (29%), Positives = 29/71 (40%)
Query: 829 TPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRR-HR 887
T V +R + + ++ + K GR K + S KS G + R R R
Sbjct: 327 TAVYQRPLTPRVPAKRKRKAGRRKKVLGRKKTRSRSS----VKSKSGGTRAKKRQHRVRR 382
Query: 888 TSYRKLGEEVT 898
T RKL EVT
Sbjct: 383 TKGRKLKNEVT 393
Score = 51 (23.0 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 21/78 (26%), Positives = 29/78 (37%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNE-TENTPKRRGRPKLNTEDSNISP 869
R R K+ K+ A +T R S ++ TE KR R K + S+
Sbjct: 1011 RSRKKTKKKKKVAREHQRTRSSTRSGSRDRTSRSVSPFTEEHTKRH-RAKTKSRRSSSDR 1069
Query: 870 AKSHEGCSTPGSRGRRHR 887
A S + R R HR
Sbjct: 1070 ASSQDRAKRRKDRDREHR 1087
Score = 46 (21.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 18/77 (23%), Positives = 29/77 (37%)
Query: 810 PRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISP 869
P+ T E ++S T R RK TK K+ E + T + ++SP
Sbjct: 988 PQITTHRIVEFRASSRSRSTSSSRSRKKTKKKKKVAREHQRTRSSTRSGSRDRTSRSVSP 1047
Query: 870 -AKSHEGCSTPGSRGRR 885
+ H ++ RR
Sbjct: 1048 FTEEHTKRHRAKTKSRR 1064
>UNIPROTKB|F1STY8 [details] [associations]
symbol:RSF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050434 "positive regulation of viral transcription"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043392 "negative
regulation of DNA binding" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0031213 "RSF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0045892 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 GO:GO:0006352 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016584
GO:GO:0006334 GO:GO:0050434 GO:GO:0043392 GO:GO:0031213 OMA:QPRVLPS
GeneTree:ENSGT00530000064411 EMBL:CU633553 EMBL:CU915366
Ensembl:ENSSSCT00000016236 Uniprot:F1STY8
Length = 1344
Score = 142 (55.0 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 42/126 (33%), Positives = 61/126 (48%)
Query: 471 VEKLKPEKELQRATSEILRR-KLKIRDLFQRLDSLCAGGFPKSLFDSEGQ---IDSEDIY 526
V K+KP+ +++ S R K D + DS + + + E + + +D
Sbjct: 738 VTKVKPKGKVRWTGSRTRGRWKYSSNDESEGSDSEKSSAASEEEEEKESEEAILADDDEP 797
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C KCG + I+LCD +CD G+H CL PPL+ I PD E W CP C K+ C
Sbjct: 798 CKKCGLPN--HPELILLCD-SCDSGYHTACLRPPLM---IIPDGE-WFCPPCQHKLLCEK 850
Query: 587 LVNELQ 592
L +LQ
Sbjct: 851 LEEQLQ 856
Score = 55 (24.4 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 54/268 (20%), Positives = 100/268 (37%)
Query: 96 KSTQTNKASCSQQNTSEQKHGTELMHNEQSEQ----KHQLCYQIVFDKPQATSLVDNAT- 150
+S SQ+ T + TE + N+Q + K ++ FD P L + T
Sbjct: 260 RSDPGGNVKSSQEATEKSTEETEKLKNDQQAKIPLKKREIKLSDDFDSPIKGPLCKSVTP 319
Query: 151 LQPVSKDVSKSSQ----------TGNRQALDFLSGNRCNELDVDCVHSEPLNQK-HQLGS 199
+ KD K + T + ++G +E +E ++ K +
Sbjct: 320 TKEFLKDELKQEEETCRRISAITTLGHEGKQLVNGEVSDEKVTPNFKTEQMDVKFYDTKE 379
Query: 200 EIIQNEPAVNIARLPSDGVEENLQTISEDLTKVCPVEPSQSP-PRDANKSCQAGEISCLQ 258
E + N+ + +G E +L ++ + K+ +E P +DA+ S E C +
Sbjct: 380 ESCSSSKDRNVL-MEGNGAE-SLNSVITSM-KIGDLEREMVPLGKDADSSVSVLETQCQK 436
Query: 259 QSSSEQTPEFTPGISSHEPSVVNYKLGSQLE-QTELGETSAGELGASLELVVKSSIEQLK 317
+ E P P + E S+ ++ L +T L T + + +E S + +
Sbjct: 437 RHIEETDP---PEM---ETSLETSEMAKDLSLKTALSTTESYSM--KIEEKSPKSKKDKR 488
Query: 318 QPEVPITIPSTKTSATKHLQSSSDLMEK 345
P + S KT K Q S + E+
Sbjct: 489 SPVLECLEKSKKTFLDKDTQRLSPIPEE 516
Score = 54 (24.1 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 32/164 (19%), Positives = 64/164 (39%)
Query: 194 KHQLGSEIIQNEPAVN-IARLPSDGVEENLQTISEDLTKVCPVEPSQSPPRDANKSCQAG 252
K L E+ Q E I+ + + G E Q ++ +++ V P+ + K
Sbjct: 321 KEFLKDELKQEEETCRRISAITTLG-HEGKQLVNGEVSDE-KVTPNFKTEQMDVKFYDTK 378
Query: 253 EISCLQQSSSEQTPEFTPGISSHEPSVVNYKLGS-QLEQTELGETSAGELGASLELVVKS 311
E SC E G S + + K+G + E LG+ + + K
Sbjct: 379 EESCSSSKDRNVLMEGN-GAESLNSVITSMKIGDLEREMVPLGKDADSSVSVLETQCQKR 437
Query: 312 SIEQLKQPEVPITIPSTKTSATKHLQSSSDLMEKKSCLEQSETP 355
IE+ PE+ ++ +++ + L+++ E S + ++P
Sbjct: 438 HIEETDPPEMETSLETSEMAKDLSLKTALSTTESYSMKIEEKSP 481
Score = 52 (23.4 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 833 RRRKSTKAAKEKLN-----ETENTPK--RRGRPKLNTEDSNISPAKSHEGCSTPGSR--- 882
RRR+S + K ++N E++ + K RRG+ +S ++S E + S
Sbjct: 1107 RRRRSRRNQKRQINYKEDSESDGSQKSLRRGKEIRRVHKRRLSSSESEESYMSKNSEDDE 1166
Query: 883 -GRRHRTSYRKLGEEVTQ 899
++ + S RK G +
Sbjct: 1167 LAKKSKRSVRKRGRSTDE 1184
Score = 42 (19.8 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 20/71 (28%), Positives = 29/71 (40%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSN--IS 868
RKR +ST E S A D + RK + + + +E E+ G DS +
Sbjct: 1176 RKRGRSTDEYSEADEDEEEEGKPSRK--RLHRIETDEEESCDNAHGDAAQPARDSQPRVL 1233
Query: 869 PAKSHEGCSTP 879
PA+ E P
Sbjct: 1234 PAEQ-ESTKRP 1243
>UNIPROTKB|I3LTW3 [details] [associations]
symbol:I3LTW3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GeneTree:ENSGT00390000008296
EMBL:AEMK01185240 EMBL:CU928954 Ensembl:ENSSSCT00000025343
Uniprot:I3LTW3
Length = 113
Score = 121 (47.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 542 ILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCIDLVNELQGTRLFITDN 601
+LCD C+ +H YCL PPL D P++E W CP C K D ++V G RL ++
Sbjct: 3 VLCD-ECNMAYHIYCLNPPL---DKVPEEEYWYCPSC--KTDSSEVVKA--GERLKMSKK 54
Query: 602 WEKVFPEAAAGHNQDPNFGLA 622
K+ P A+ +D G+A
Sbjct: 55 KAKM-PSASTESRRDWGRGMA 74
>MGI|MGI:2444959 [details] [associations]
symbol:Mll3 "myeloid/lymphoid or mixed-lineage leukemia 3"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016571 "histone methylation"
evidence=IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018022 "peptidyl-lysine methylation" evidence=ISO] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0035097 "histone
methyltransferase complex" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051568 "histone
H3-K4 methylation" evidence=ISO] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR000637 InterPro:IPR001214
InterPro:IPR001594 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964 Pfam:PF05965
PROSITE:PS00354 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50216
PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543 SMART:SM00109
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00384
SMART:SM00541 SMART:SM00542 MGI:MGI:2444959 GO:GO:0006355
GO:GO:0035556 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 SMART:SM00398 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 eggNOG:COG2940
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 GO:GO:0042800
GO:GO:0035097 HOVERGEN:HBG045586 ChiTaRS:MLL3 EMBL:AY138582
EMBL:AC116469 EMBL:AC127319 EMBL:AC134910 EMBL:AK044828
EMBL:AK054270 EMBL:AK077567 EMBL:AY036886 EMBL:AY036887
IPI:IPI00620674 IPI:IPI00623069 UniGene:Mm.332268
ProteinModelPortal:Q8BRH4 SMR:Q8BRH4 IntAct:Q8BRH4 STRING:Q8BRH4
PhosphoSite:Q8BRH4 PaxDb:Q8BRH4 PRIDE:Q8BRH4 UCSC:uc008wsv.1
HOGENOM:HOG000113602 InParanoid:Q8BRH4 OrthoDB:EOG4THVS4
Bgee:Q8BRH4 CleanEx:MM_MLL3 Genevestigator:Q8BRH4
GermOnline:ENSMUSG00000038056 Uniprot:Q8BRH4
Length = 4903
Score = 117 (46.2 bits), Expect = 3.1e-06, Sum P(4) = 3.1e-06
Identities = 100/380 (26%), Positives = 159/380 (41%)
Query: 16 SSTR-DHSCLKQTT----PEQMCKFCAECIHSEPLESKSLLGSEAVENEPR-ETSIPNSE 69
SST+ H+CL T + +C FC +C H E L+ K +L + E P +
Sbjct: 444 SSTQWHHNCLICDTCYQQQDNLCPFCGKCYHPE-LQ-KDMLHCNMCKRWVHLECDKPTDQ 501
Query: 70 KLQAFCGDVPDSSFTDHLAPPSEDMRKSTQTNKASCSQQNTSEQK-HGTE--LMHNEQSE 126
+L + + + HL + + + S + GTE ++ EQ+
Sbjct: 502 ELDSQLKEDYICMYCKHLGAEIDPLHPGNEVEMPELPTDYASGMEIEGTEDEVVFLEQTV 561
Query: 127 QK----HQLCYQIVFDKPQATS--LVDNATLQPVSKDVSKSSQTGNRQALDFLSGNRCNE 180
K HQ IV D T N P + + S + N+ D L+ +E
Sbjct: 562 NKDVSDHQCRPGIVPDVQVYTEEPQKSNPLESPDTVGLITSESSDNKMNPD-LANEIAHE 620
Query: 181 LDVDCVHSEPLNQKHQLGSEIIQNEPAV----NIARLPSDGV--EENLQTISEDLTKVCP 234
+D + +E L++ + E QNE + NI LP + +E+L +SED ++V
Sbjct: 621 VDTE--KTEMLSKGRHVCEED-QNEDRMEVTENIEVLPHQTIVPQEDL-LLSED-SEVAS 675
Query: 235 VEPSQSPPRDANKSCQAGEISCLQQSSSEQTPEFTPGISSHEPSVVNYKLGSQLEQTELG 294
E SPP+ A ++ A E L SE++ +S EP ++ ++ ++EQ E
Sbjct: 676 KE--LSPPKSAPETA-APE--ALLSPHSERS------LSCKEP-LLTERVQEEMEQKENS 723
Query: 295 ETSAGELGASLELVVKS-----SIEQLKQPEVPITIPSTKTSATK----HLQSSSDLM-E 344
E S G + + L V S S + K E+P ST +SAT + SSS L +
Sbjct: 724 EFSTGCVDFEMTLAVDSCDKDSSCQGDKYVELPAEEESTFSSATDLNKADVSSSSTLCSD 783
Query: 345 KKSCLEQSETPPNYVANNSA 364
SC PP + NSA
Sbjct: 784 LPSCDMLHGYPPAF---NSA 800
Score = 99 (39.9 bits), Expect = 3.1e-06, Sum P(4) = 3.1e-06
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 516 SEGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLC 575
S+G E C CG + ++LCD CD +H YCL+PPL + +P GW C
Sbjct: 992 SKGWRCLECTVCEACGKA--TDPGRLLLCDD-CDISYHTYCLDPPL--QTVPKG--GWKC 1044
Query: 576 PGC 578
C
Sbjct: 1045 KWC 1047
Score = 83 (34.3 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 513 LFDSEGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEG 572
LF S + + C CGS A+ ++ C C + +H YC+ + K + +G
Sbjct: 939 LFSSSDKFTLQQDMCVVCGSFGQGAEGRLLACS-QCGQCYHPYCVSIKITKVVL---SKG 994
Query: 573 WLCPGC 578
W C C
Sbjct: 995 WRCLEC 1000
Score = 56 (24.8 bits), Expect = 3.1e-06, Sum P(4) = 3.1e-06
Identities = 19/78 (24%), Positives = 34/78 (43%)
Query: 821 SSASPDGKTPVIRRRKSTKAAKEKLNET-------ENTPKRRGRPKLNTED--SNISPAK 871
+S P G+ P + + ++ + + L + E K+R R K +D S +P+
Sbjct: 3560 NSNVPCGQDPAVTQGQNYSGSSQSLIQLYSDIIPEEKGKKKRTRKKKKDDDAESGKAPST 3619
Query: 872 SHEGCSTPGSRGRRHRTS 889
H C+ P + G TS
Sbjct: 3620 PHSDCAAPLTPGLSETTS 3637
Score = 53 (23.7 bits), Expect = 6.0e-06, Sum P(4) = 6.0e-06
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 809 GPRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTP 852
G +KRT+ K+ A GK P L+ET +TP
Sbjct: 3597 GKKKRTRKKKKDDDAE-SGKAPSTPHSDCAAPLTPGLSETTSTP 3639
Score = 42 (19.8 bits), Expect = 3.1e-06, Sum P(4) = 3.1e-06
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 887 RTSYRKLGEEVTQVIWLSADAF 908
R+ RK EE Q ++ S+D+F
Sbjct: 3857 RSKKRKKDEEEKQAMYSSSDSF 3878
Score = 40 (19.1 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 817 TKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRP 858
++EG DGK+ R++ + + T+ KR+ +P
Sbjct: 1229 SREGELMDCDGKSESSPEREAGDDETKGIEGTDAIKKRKRKP 1270
>UNIPROTKB|F1P8R2 [details] [associations]
symbol:RSF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050434 "positive regulation of viral
transcription" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043392 "negative regulation of DNA binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006334 "nucleosome assembly" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0045892
GO:GO:0045893 GO:GO:0046872 GO:GO:0008270 GO:GO:0006352
GO:GO:0006338 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016584 GO:GO:0006334 GO:GO:0050434
GO:GO:0043392 GO:GO:0031213 CTD:51773 KO:K11657 OMA:QPRVLPS
EMBL:AAEX03012787 GeneTree:ENSGT00530000064411 EMBL:AAEX03012788
RefSeq:XP_534002.2 Ensembl:ENSCAFT00000007880 GeneID:476797
KEGG:cfa:476797 Uniprot:F1P8R2
Length = 1434
Score = 144 (55.7 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 42/126 (33%), Positives = 61/126 (48%)
Query: 471 VEKLKPEKELQRATSEILRR-KLKIRDLFQRLDSLCAGGFPKSLFDSEGQ---IDSEDIY 526
V K+KP+ +++ S R K D + DS + + + E + + +D
Sbjct: 831 VSKVKPKGKVRWTGSRTRGRWKYSSNDESEASDSEKSSAASEEEEEKESEEAILADDDEP 890
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C KCG + I+LCD +CD G+H CL PPL+ I PD E W CP C K+ C
Sbjct: 891 CKKCGLPN--HPELILLCD-SCDSGYHTACLRPPLM---IIPDGE-WFCPPCQHKLLCEK 943
Query: 587 LVNELQ 592
L +LQ
Sbjct: 944 LEEQLQ 949
Score = 52 (23.4 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 13/52 (25%), Positives = 23/52 (44%)
Query: 819 EGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPA 870
E + + K V +R +ST E E E P R+ ++ T++ + A
Sbjct: 1256 EDDELAKESKRSVRKRGRSTDEYSEADEEEEGKPSRKRLHRIETDEESCDNA 1307
Score = 51 (23.0 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 25/95 (26%), Positives = 39/95 (41%)
Query: 259 QSSSEQTPEFTPGISSHEPSVVNYKLGSQLEQTELGETSAGELGASLELVVKSSIEQLKQ 318
+S +PE G + + KL S+ E E TS+ E G LE K+ E LK+
Sbjct: 613 ESGKPVSPEAAEGSAPSNMTDHCEKLASEKEVVECQNTSSTE-GQPLE---KTDPEILKK 668
Query: 319 PEVPITIPSTKTSATKHLQSSSDLMEKKSCLEQSE 353
+ T + D E KS +++S+
Sbjct: 669 DSESTKV-ETDNLDNAQTSGTEDPSEAKSSVQKSK 702
Score = 50 (22.7 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 19/78 (24%), Positives = 34/78 (43%)
Query: 833 RRRKSTKAAKEKLN-----ETENTPK--RRGRPKLNTEDSNISPAKSHEGCSTPGSR--- 882
RRR+S + K ++N E++ + K RRG+ +S ++S E + S
Sbjct: 1200 RRRRSRRNQKRQINYKEDSESDGSQKSLRRGKEIRRVHKRRLSSSESEESYMSKNSEDDE 1259
Query: 883 -GRRHRTSYRKLGEEVTQ 899
+ + S RK G +
Sbjct: 1260 LAKESKRSVRKRGRSTDE 1277
Score = 39 (18.8 bits), Expect = 7.3e-05, Sum P(3) = 7.3e-05
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 825 PDGKTPVIRRRKSTKAAKEKLNETENTPKRR 855
PD ++K +K AK L E +T R+
Sbjct: 984 PDFSEDHEEKKKDSKKAKANLLERRSTRTRK 1014
Score = 38 (18.4 bits), Expect = 9.1e-05, Sum P(3) = 9.1e-05
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRR 835
RKR +ST E S A + + R+R
Sbjct: 1269 RKRGRSTDEYSEADEEEEGKPSRKR 1293
>UNIPROTKB|J9P712 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907
GeneTree:ENSGT00530000063661 EMBL:AAEX03011329
Ensembl:ENSCAFT00000046673 Uniprot:J9P712
Length = 1626
Score = 140 (54.3 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 518 GQIDSED-IYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCP 576
G+ + ED +C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W CP
Sbjct: 172 GEEEEEDPTFCEVCGRSD--REDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WFCP 224
Query: 577 GC 578
C
Sbjct: 225 EC 226
Score = 61 (26.5 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 21/86 (24%), Positives = 38/86 (44%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPA 870
R++TKS SS+ +R+K+ + + + ++ +RR R + + S+
Sbjct: 1040 RQQTKSRGRRSSSDHSSSHERAKRKKAKEEGRRRKRDSWGHGRRRSRSRSGSPGSS---- 1095
Query: 871 KSHEGCSTPGSRGRRHRTSYRKLGEE 896
SHE R +R R+ R G E
Sbjct: 1096 -SHE--RRESRRRKRRRSGSRSRGRE 1118
Score = 41 (19.5 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 22/88 (25%), Positives = 37/88 (42%)
Query: 808 GGPRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNI 867
G R R++S GSS+ ++ +RR+S ++ + ++ R R + E S
Sbjct: 1081 GRRRSRSRSGSPGSSSHERRESRRRKRRRSGSRSRGRECSPASSLDRARRHRHPRERSRE 1140
Query: 868 SPA---KSHEG----CSTPGSRGRRHRT 888
P SHE +P S HR+
Sbjct: 1141 RPRIRWGSHERRKRRSRSPRSPSTEHRS 1168
Score = 39 (18.8 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 808 GGPRKRTKSTKEGSSASPDGKTPVIRRRKSTKA 840
G R+R++S + GS S + RRRK ++
Sbjct: 1079 GHGRRRSRS-RSGSPGSSSHERRESRRRKRRRS 1110
>UNIPROTKB|F1PXY6 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 OMA:YMKKLHM
GeneTree:ENSGT00530000063661 EMBL:AAEX03011329
Ensembl:ENSCAFT00000010559 Uniprot:F1PXY6
Length = 1637
Score = 140 (54.3 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 518 GQIDSED-IYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCP 576
G+ + ED +C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W CP
Sbjct: 181 GEEEEEDPTFCEVCGRSD--REDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WFCP 233
Query: 577 GC 578
C
Sbjct: 234 EC 235
Score = 61 (26.5 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 21/86 (24%), Positives = 38/86 (44%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPA 870
R++TKS SS+ +R+K+ + + + ++ +RR R + + S+
Sbjct: 1052 RQQTKSRGRRSSSDHSSSHERAKRKKAKEEGRRRKRDSWGHGRRRSRSRSGSPGSS---- 1107
Query: 871 KSHEGCSTPGSRGRRHRTSYRKLGEE 896
SHE R +R R+ R G E
Sbjct: 1108 -SHE--RRESRRRKRRRSGSRSRGRE 1130
Score = 41 (19.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 22/88 (25%), Positives = 37/88 (42%)
Query: 808 GGPRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNI 867
G R R++S GSS+ ++ +RR+S ++ + ++ R R + E S
Sbjct: 1093 GRRRSRSRSGSPGSSSHERRESRRRKRRRSGSRSRGRECSPASSLDRARRHRHPRERSRE 1152
Query: 868 SPA---KSHEG----CSTPGSRGRRHRT 888
P SHE +P S HR+
Sbjct: 1153 RPRIRWGSHERRKRRSRSPRSPSTEHRS 1180
Score = 39 (18.8 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 808 GGPRKRTKSTKEGSSASPDGKTPVIRRRKSTKA 840
G R+R++S + GS S + RRRK ++
Sbjct: 1091 GHGRRRSRS-RSGSPGSSSHERRESRRRKRRRS 1122
>UNIPROTKB|I3LU11 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00109 SMART:SM00184 SMART:SM00249
Prosite:PS00518 GO:GO:0035556 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 OMA:YMKKLHM
GeneTree:ENSGT00530000063661 EMBL:FP015900
Ensembl:ENSSSCT00000024857 Uniprot:I3LU11
Length = 1643
Score = 143 (55.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 518 GQIDSED-IYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCP 576
G+ + ED +C CG D ++ ++LCDG CD G+H CLEPPL +++P D+ W CP
Sbjct: 175 GEHEEEDPTFCEVCGRSD--REDRLLLCDG-CDAGYHMECLEPPL--QEVPVDE--WFCP 227
Query: 577 GC 578
C
Sbjct: 228 EC 229
Score = 64 (27.6 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 21/67 (31%), Positives = 32/67 (47%)
Query: 834 RRKSTKAAKEKLNETENTPKRRG---RPKLNTEDSNISP-AKSHEGCSTPGSRGRRHRTS 889
R S + AK K + ++ +RRG R + + + SP + SHE G R +R R+
Sbjct: 1047 RSSSHERAKRKKAKAKSRERRRGSWGRGRRRSRSRSCSPGSSSHE--HREGRRRKRRRSG 1104
Query: 890 YRKLGEE 896
R G E
Sbjct: 1105 SRSRGRE 1111
Score = 54 (24.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 22/84 (26%), Positives = 35/84 (41%)
Query: 810 PR-KRTKSTKEGSSASPDGKTPVIRR-RKSTKAAKEKLNETENTPK---RRGRPKLNTED 864
PR +R + KEG D + RR R+S + E P+ +R RP+ + D
Sbjct: 1127 PRERRERLDKEGGVRPRDRRGSRERRKRRSRSPSLEHRPREHRRPRSREKRPRPRARSPD 1186
Query: 865 SNISPAKSHEGCSTPGSRG--RRH 886
++P ++ G G R H
Sbjct: 1187 KKLAPKEASPVPPPQGEPGPDREH 1210
Score = 52 (23.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 809 GPRKRTKSTKEGSSA-SPDGKTPVIR-RRKSTKAAKEKLNETENTPKRRGR 857
G RK+ K+ S S GK+ R RR+ ++A + K + +N R R
Sbjct: 342 GRRKKVPGRKKSQSRPSAKGKSCGTRLRRRQSRAKRRKGQKAKNEATARAR 392
Score = 52 (23.4 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 24/86 (27%), Positives = 37/86 (43%)
Query: 808 GGPRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNI 867
G R R++S GSS+ + +RR+S ++ + ++ +R RP+ E
Sbjct: 1074 GRRRSRSRSCSPGSSSHEHREGRRRKRRRSGSRSRGREGSPPSSLERGRRPRHPRERRE- 1132
Query: 868 SPAKSHEGCSTP----GSRGRRHRTS 889
EG P GSR RR R S
Sbjct: 1133 --RLDKEGGVRPRDRRGSRERRKRRS 1156
Score = 51 (23.0 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 17/91 (18%), Positives = 33/91 (36%)
Query: 809 GPRKRTKSTKEGSSASPDGKTPVIRRRK----STKAAKEKLNETENTPKRRGRPKLNTED 864
G R + S SP G +R + S +++ ++ + E +++ + K
Sbjct: 1008 GSRSSRSGDRSSRSVSPAGAEDQAKRHRPKARSRRSSSDRSSSHERAKRKKAKAKSRERR 1067
Query: 865 SNI---SPAKSHEGCSTPGSRGRRHRTSYRK 892
+S +PGS HR R+
Sbjct: 1068 RGSWGRGRRRSRSRSCSPGSSSHEHREGRRR 1098
Score = 37 (18.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 719 AVLEDNRSSGNDEGAASPLGHSNGQ 743
A E + +SG +PLG S G+
Sbjct: 741 AAREPSAASGGAPQPPAPLGPSRGK 765
>ZFIN|ZDB-GENE-040426-2039 [details] [associations]
symbol:uhrf1 "ubiquitin-like, containing PHD and
RING finger domains, 1" species:7955 "Danio rerio" [GO:0042393
"histone binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0002088 "lens development in camera-type eye"
evidence=IMP] [GO:0031100 "organ regeneration" evidence=IMP]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS;IMP]
[GO:0016574 "histone ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005657 "replication fork" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] [GO:0000790 "nuclear
chromatin" evidence=ISS] [GO:0000791 "euchromatin" evidence=ISS]
[GO:0000792 "heterochromatin" evidence=ISS] [GO:0044729
"hemi-methylated DNA-binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00299 Prosite:PS00518
ZFIN:ZDB-GENE-040426-2039 GO:GO:0005737 GO:GO:0046872 GO:GO:0031100
GO:GO:0008270 GO:GO:0006351 GO:GO:0000122 GO:GO:0007049
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0016574 GO:GO:0002088
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
KO:K10638 Gene3D:2.30.280.10 CTD:29128 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148
EMBL:AY648713 EMBL:BX927276 EMBL:FP360035 EMBL:BC058055
IPI:IPI00497177 RefSeq:NP_998242.1 RefSeq:XP_003201004.1
UniGene:Dr.77703 PRIDE:E7EZF3 Ensembl:ENSDART00000012551
Ensembl:ENSDART00000121555 Ensembl:ENSDART00000122573
Ensembl:ENSDART00000126951 GeneID:100538017 GeneID:406350
KEGG:dre:100538017 KEGG:dre:406350 NextBio:20817968
ArrayExpress:E7EZF3 Bgee:E7EZF3 Uniprot:E7EZF3
Length = 776
Score = 137 (53.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 37/96 (38%), Positives = 48/96 (50%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG K D + LCD CD FH YCL PPL PDDE W CP DC+ D +
Sbjct: 316 CHVCGIKQ-DPDKQL-LCD-ECDMAFHTYCLNPPLTTI---PDDEDWYCP--DCRNDASE 367
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLA 622
+V L G +L + K+ A++ +D G+A
Sbjct: 368 VV--LAGEKLKESKKKAKM-ASASSSSQRDWGKGMA 400
Score = 52 (23.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 818 KEGSSASPDGKTPVI-RRRKSTKAAKEKLNETENTPKR 854
KE + +TP +R++ +++ +EK + T+ TPK+
Sbjct: 620 KENKNEDDIEETPTKGKRKRKSQSMEEKSSPTKGTPKK 657
Score = 44 (20.5 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 809 GPRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEK 844
G RKR + E S SP TP + ++ K +KE+
Sbjct: 635 GKRKRKSQSMEEKS-SPTKGTPKKMKVEAYKLSKEQ 669
Score = 44 (20.5 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 825 PDGKTPVIRRRKSTKAAKEKLNETENTP-KRRGRPKLNTEDSNISPAK 871
P+G + ++ K K + ++ E TP K + + K + + SP K
Sbjct: 606 PEGYLEAVAAKEKEKENKNE-DDIEETPTKGKRKRKSQSMEEKSSPTK 652
>UNIPROTKB|H0YCN2 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:AP000580
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:AP000609
EMBL:AP002343 HGNC:HGNC:18118 ChiTaRS:RSF1 Ensembl:ENST00000526324
Bgee:H0YCN2 Uniprot:H0YCN2
Length = 803
Score = 137 (53.3 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 32/76 (42%), Positives = 41/76 (53%)
Query: 517 EGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCP 576
E + +D C KCG + I+LCD +CD G+H CL PPL+ I PD E W CP
Sbjct: 685 EAILADDDEPCKKCGLPN--HPELILLCD-SCDSGYHTACLRPPLM---IIPDGE-WFCP 737
Query: 577 GCDCKVDCIDLVNELQ 592
C K+ C L +LQ
Sbjct: 738 PCQHKLLCEKLEEQLQ 753
Score = 49 (22.3 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 25/113 (22%), Positives = 45/113 (39%)
Query: 38 ECIHSEPLESKSLLGSEAVENEPRETSIPNSEKLQAFCGDVPDSSFTDHLAPPS------ 91
E + LES+ EA E P I + EKL A +V + T + S
Sbjct: 409 EEVPKSTLESEKPGSPEAAETSPPSNIIDHCEKL-ASEKEVVECQSTSTVGGQSVKKVDL 467
Query: 92 EDMRKSTQTNKASCSQQNTSEQKHGTELMHNEQSEQKHQLCYQIVFDKPQATS 144
E +++ ++ K + ++ E + S QK + Y++V ++ S
Sbjct: 468 ETLKEDSEFTKVEMDNLDNAQTSGIEEPSETKGSMQKSKFKYKLVPEEETTAS 520
Score = 45 (20.9 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 19/76 (25%), Positives = 30/76 (39%)
Query: 38 ECIHSEPLESKSLLGSEAVENEPRETSIPNSEKLQAFCGDVPDSSFTDHLAPPSE--DMR 95
EC+ K+ L +A P +P S L++ + P S +PPS D
Sbjct: 384 ECLEKLEKSKKTFLDKDAQRLSPIPEEVPKST-LES---EKPGSPEAAETSPPSNIIDHC 439
Query: 96 KSTQTNKASCSQQNTS 111
+ + K Q+TS
Sbjct: 440 EKLASEKEVVECQSTS 455
>RGD|1309990 [details] [associations]
symbol:Uhrf2 "ubiquitin-like with PHD and ring finger domains 2,
E3 ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005720 "nuclear
heterochromatin" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA;ISO]
[GO:0042393 "histone binding" evidence=IEA;ISO] [GO:0051865
"protein autoubiquitination" evidence=IEA;ISO] [GO:0071158
"positive regulation of cell cycle arrest" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 RGD:1309990
Prosite:PS00518 GO:GO:0030154 GO:GO:0071158 GO:GO:0046872
GO:GO:0008283 GO:GO:0008270 GO:GO:0005720 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511
GO:GO:0004842 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907
GO:GO:0051865 Gene3D:2.30.30.30 InterPro:IPR014722 EMBL:CH473953
Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296 InterPro:IPR021991
Pfam:PF12148 OrthoDB:EOG408N7M CTD:115426 KO:K15713 IPI:IPI00213897
RefSeq:NP_001101055.1 UniGene:Rn.2173 Ensembl:ENSRNOT00000015406
GeneID:309331 KEGG:rno:309331 UCSC:RGD:1309990 NextBio:660596
Uniprot:D3ZK36
Length = 803
Score = 135 (52.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 35/96 (36%), Positives = 49/96 (51%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C KCG K N +LCD C+ +H YCL PPL D P++E W CP C K D +
Sbjct: 348 CHKCGEK--RDPNMQLLCD-ECNMAYHIYCLSPPL---DKVPEEEYWYCPSC--KTDSSE 399
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLA 622
+V G +L ++ K+ P A+ +D G+A
Sbjct: 400 VVKA--GEKLKLSKKKAKM-PSASTESRRDWGRGMA 432
Score = 51 (23.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 16/67 (23%), Positives = 34/67 (50%)
Query: 96 KSTQTNKASCSQQNTSEQKHGTELMHNEQSEQKHQLCYQIVFDK-PQATSLVDNAT-LQP 153
K T N S++NT++ + +++ + Y I +D+ P++ +L NA L+P
Sbjct: 173 KRTNGNVNHNSKENTNKLDNVPSTSNSDSVAADEDVIYHIEYDEYPESGTLEMNAKELRP 232
Query: 154 VSKDVSK 160
++ + K
Sbjct: 233 RARTILK 239
>UNIPROTKB|A7E320 [details] [associations]
symbol:UHRF1 "E3 ubiquitin-protein ligase UHRF1"
species:9913 "Bos taurus" [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0005657 "replication fork" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0000791 "euchromatin"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0035064 "methylated histone residue binding" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0016574 "histone ubiquitination"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0031493 "nucleosomal
histone binding" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0006351 GO:GO:0000122 GO:GO:0007049 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787
GO:GO:0051865 GO:GO:0000792 GO:GO:0005657 GO:GO:0016574
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
eggNOG:COG3440 KO:K10638 Gene3D:2.30.280.10 EMBL:DAAA02019593
EMBL:DAAA02019594 EMBL:BC151671 IPI:IPI00904793
RefSeq:NP_001096568.1 UniGene:Bt.64682 ProteinModelPortal:A7E320
SMR:A7E320 STRING:A7E320 Ensembl:ENSBTAT00000044908 GeneID:530411
KEGG:bta:530411 CTD:29128 GeneTree:ENSGT00390000008296
HOGENOM:HOG000124662 HOVERGEN:HBG059298 OMA:HVEPGLQ
NextBio:20875252 ArrayExpress:A7E320 GO:GO:0044729
InterPro:IPR021991 Pfam:PF12148 Uniprot:A7E320
Length = 786
Score = 136 (52.9 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 34/96 (35%), Positives = 49/96 (51%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG K D + +CD CD FH YCL PPL +PP++E W CP DC++D +
Sbjct: 322 CHVCGGKQ-DPDKQL-MCD-ECDMAFHIYCLRPPL--SSVPPEEE-WYCP--DCRIDSSE 373
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLA 622
+V G +L + K+ A + +D G+A
Sbjct: 374 VVQA--GEKLKESKKKAKM-ASATSSSQRDWGKGMA 406
>UNIPROTKB|H0YDG9 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:AP000580
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:AP000609
EMBL:AP002343 HGNC:HGNC:18118 ChiTaRS:RSF1 Ensembl:ENST00000531026
Bgee:H0YDG9 Uniprot:H0YDG9
Length = 276
Score = 133 (51.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 30/66 (45%), Positives = 37/66 (56%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C KCG + I+LCD +CD G+H CL PPL+ I PD E W CP C K+ C
Sbjct: 3 CKKCGLPN--HPELILLCD-SCDSGYHTACLRPPLM---IIPDGE-WFCPPCQHKLLCEK 55
Query: 587 LVNELQ 592
L +LQ
Sbjct: 56 LEEQLQ 61
Score = 37 (18.1 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 825 PDGKTPVIRRRKSTKAAKEKLNETENTPKRR 855
PD ++K +K +K L E +T R+
Sbjct: 96 PDFSEDQEEKKKDSKKSKANLLERRSTRTRK 126
>UNIPROTKB|F6UA42 [details] [associations]
symbol:uhrf1 "E3 ubiquitin-protein ligase UHRF1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0000791 "euchromatin" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005657 "replication fork"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0016574 "histone ubiquitination" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISS] [GO:0051865 "protein autoubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0000122 GO:GO:0007049 GO:GO:0000790 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0016574 GO:GO:0010216
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791 KO:K10638
Gene3D:2.30.280.10 CTD:29128 GO:GO:0044729 InterPro:IPR021991
Pfam:PF12148 EMBL:AAMC01100082 EMBL:AAMC01100083 EMBL:AAMC01100084
EMBL:AAMC01100085 EMBL:AAMC01100086 EMBL:AAMC01100087
RefSeq:XP_002940183.1 GeneID:100491405 KEGG:xtr:100491405
Xenbase:XB-GENE-5821474 Bgee:F6UA42 Uniprot:F6UA42
Length = 775
Score = 129 (50.5 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 35/96 (36%), Positives = 48/96 (50%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG K + + LCD CD FH YCL+PPL P DE W CP DC+ D +
Sbjct: 318 CYVCGGKQ-DPEKQL-LCD-ECDMAFHIYCLKPPL---SAIPQDEDWYCP--DCRNDASE 369
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLA 622
+V L G +L + K+ A++ +D G+A
Sbjct: 370 VV--LAGEKLKESKKKAKM-ASASSSSQRDWGKGMA 402
Score = 54 (24.1 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 825 PDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKS 872
PDG + ++ K K + +E +P + G+ K N+ S +S AKS
Sbjct: 608 PDGYLESLASKEREKENKTE-DELSESPSK-GKRKRNSAGSGLSDAKS 653
Score = 44 (20.5 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 22/120 (18%), Positives = 51/120 (42%)
Query: 215 SDGVEENLQTISEDLTKVCPVEPSQSPPRDANKSCQAGEISCLQQSSSEQTPEFTPGISS 274
S G+ + +Q + + P + + DA+ C +G+ + SS + G
Sbjct: 62 SVGLNDIVQLLVRQIPDSVPTKDKECGISDADSGCGSGQGESDKNSSCGEGATDVDG--- 118
Query: 275 HEPSVVNYK-LGSQL-EQTELGETSAGELGASLELVVKSSIEQLKQPEVPITIPSTKTSA 332
+P+ +N + +G L ++ +L + +GA E + S +++ + I T ++
Sbjct: 119 -QPAGINSENVGPSLYKKNDLVDARDLNMGAWFEAQIVSVSKRVNPDGMSAEILDTSAAS 177
>UNIPROTKB|Q96T23 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0050434
"positive regulation of viral transcription" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0006334 "nucleosome assembly" evidence=IDA;TAS]
[GO:0042393 "histone binding" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0043392 "negative regulation of DNA
binding" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031213 "RSF
complex" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0045892 Reactome:REACT_115566
GO:GO:0045893 GO:GO:0005654 GO:GO:0046872 GO:GO:0008270
GO:GO:0006352 EMBL:AP000580 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0042393 GO:GO:0034080 GO:GO:0016584
PROSITE:PS50827 GO:GO:0050434 GO:GO:0043392 eggNOG:NOG79337
GO:GO:0031213 EMBL:AF380176 EMBL:AF227948 EMBL:AP000609
EMBL:AP002343 EMBL:AF059317 EMBL:BC046124 EMBL:AK001268
IPI:IPI00290652 IPI:IPI00514411 IPI:IPI00982445 RefSeq:NP_057662.3
UniGene:Hs.420229 ProteinModelPortal:Q96T23 SMR:Q96T23
IntAct:Q96T23 STRING:Q96T23 PhosphoSite:Q96T23 DMDM:251757329
PaxDb:Q96T23 PRIDE:Q96T23 DNASU:51773 Ensembl:ENST00000308488
Ensembl:ENST00000360355 Ensembl:ENST00000480887 GeneID:51773
KEGG:hsa:51773 UCSC:uc001oym.3 CTD:51773 GeneCards:GC11M077371
H-InvDB:HIX0022742 HGNC:HGNC:18118 HPA:CAB022626 MIM:608522
neXtProt:NX_Q96T23 PharmGKB:PA29210 HOGENOM:HOG000154205
HOVERGEN:HBG105728 InParanoid:Q96T23 KO:K11657 OMA:QPRVLPS
OrthoDB:EOG441QBQ PhylomeDB:Q96T23 ChiTaRS:RSF1 GenomeRNAi:51773
NextBio:55899 Bgee:Q96T23 CleanEx:HS_RSF1 Genevestigator:Q96T23
GermOnline:ENSG00000048649 Uniprot:Q96T23
Length = 1441
Score = 137 (53.3 bits), Expect = 6.3e-05, Sum P(3) = 6.3e-05
Identities = 32/76 (42%), Positives = 41/76 (53%)
Query: 517 EGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCP 576
E + +D C KCG + I+LCD +CD G+H CL PPL+ I PD E W CP
Sbjct: 884 EAILADDDEPCKKCGLPN--HPELILLCD-SCDSGYHTACLRPPLM---IIPDGE-WFCP 936
Query: 577 GCDCKVDCIDLVNELQ 592
C K+ C L +LQ
Sbjct: 937 PCQHKLLCEKLEEQLQ 952
Score = 49 (22.3 bits), Expect = 6.3e-05, Sum P(3) = 6.3e-05
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 819 EGSSASPDGKTPVIRRRKST---KAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEG 875
E + + K V +R +ST A E+ E E P R+ ++ T++ S +H
Sbjct: 1259 EDDELAKESKRSVRKRGRSTDEYSEADEEEEEEEGKPSRKRLHRIETDEEE-SCDNAHGD 1317
Query: 876 CSTP 879
+ P
Sbjct: 1318 ANQP 1321
Score = 49 (22.3 bits), Expect = 6.3e-05, Sum P(3) = 6.3e-05
Identities = 19/78 (24%), Positives = 34/78 (43%)
Query: 833 RRRKSTKAAKEKLN-----ETENTPK--RRGRPKLNTEDSNISPAKSHEGCSTPGSR--- 882
RRR+S + K ++N E++ + K RRG+ +S ++S E + S
Sbjct: 1203 RRRRSRRNQKRQINYKEDSESDGSQKSLRRGKEIRRVHKRRLSSSESEESYLSKNSEDDE 1262
Query: 883 -GRRHRTSYRKLGEEVTQ 899
+ + S RK G +
Sbjct: 1263 LAKESKRSVRKRGRSTDE 1280
Score = 49 (22.3 bits), Expect = 6.3e-05, Sum P(3) = 6.3e-05
Identities = 25/113 (22%), Positives = 45/113 (39%)
Query: 38 ECIHSEPLESKSLLGSEAVENEPRETSIPNSEKLQAFCGDVPDSSFTDHLAPPS------ 91
E + LES+ EA E P I + EKL A +V + T + S
Sbjct: 608 EEVPKSTLESEKPGSPEAAETSPPSNIIDHCEKL-ASEKEVVECQSTSTVGGQSVKKVDL 666
Query: 92 EDMRKSTQTNKASCSQQNTSEQKHGTELMHNEQSEQKHQLCYQIVFDKPQATS 144
E +++ ++ K + ++ E + S QK + Y++V ++ S
Sbjct: 667 ETLKEDSEFTKVEMDNLDNAQTSGIEEPSETKGSMQKSKFKYKLVPEEETTAS 719
Score = 45 (20.9 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 19/76 (25%), Positives = 30/76 (39%)
Query: 38 ECIHSEPLESKSLLGSEAVENEPRETSIPNSEKLQAFCGDVPDSSFTDHLAPPSE--DMR 95
EC+ K+ L +A P +P S L++ + P S +PPS D
Sbjct: 583 ECLEKLEKSKKTFLDKDAQRLSPIPEEVPKST-LES---EKPGSPEAAETSPPSNIIDHC 638
Query: 96 KSTQTNKASCSQQNTS 111
+ + K Q+TS
Sbjct: 639 EKLASEKEVVECQSTS 654
Score = 37 (18.1 bits), Expect = 0.00095, Sum P(3) = 0.00095
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 825 PDGKTPVIRRRKSTKAAKEKLNETENTPKRR 855
PD ++K +K +K L E +T R+
Sbjct: 987 PDFSEDQEEKKKDSKKSKANLLERRSTRTRK 1017
>MGI|MGI:1923718 [details] [associations]
symbol:Uhrf2 "ubiquitin-like, containing PHD and RING finger
domains 2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS;IDA]
[GO:0005720 "nuclear heterochromatin" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO;ISS]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=ISS] [GO:0042393
"histone binding" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=ISO;ISS] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=ISO] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 MGI:MGI:1923718
Prosite:PS00299 Prosite:PS00518 GO:GO:0030154 GO:GO:0071158
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 PROSITE:PS01359
GO:GO:0004842 GO:GO:0042393 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 eggNOG:COG3440 Gene3D:2.30.280.10
GeneTree:ENSGT00390000008296 HOGENOM:HOG000124662
HOVERGEN:HBG059298 InterPro:IPR021991 Pfam:PF12148
OrthoDB:EOG408N7M CTD:115426 KO:K15713 OMA:VNHNSKE EMBL:AB116653
EMBL:AF274047 EMBL:AK031036 EMBL:AK041564 EMBL:AK042321
EMBL:AK051743 EMBL:AK080925 EMBL:BC060241 IPI:IPI00169767
IPI:IPI00607019 IPI:IPI00757694 RefSeq:NP_659122.2
UniGene:Mm.313364 ProteinModelPortal:Q7TMI3 SMR:Q7TMI3
STRING:Q7TMI3 PhosphoSite:Q7TMI3 PRIDE:Q7TMI3
Ensembl:ENSMUST00000025739 GeneID:109113 KEGG:mmu:109113
UCSC:uc008hef.1 UCSC:uc008heh.1 UCSC:uc008hei.1 InParanoid:Q7TMI3
NextBio:361658 Bgee:Q7TMI3 Genevestigator:Q7TMI3
GermOnline:ENSMUSG00000024817 Uniprot:Q7TMI3
Length = 803
Score = 138 (53.6 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 36/96 (37%), Positives = 49/96 (51%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C KCG K N +LCD C+ +H YCL PPL D P++E W CP C K D +
Sbjct: 348 CHKCGEK--RDPNMQLLCD-ECNMAYHIYCLSPPL---DKVPEEEYWYCPSC--KTDSSE 399
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLA 622
+V G RL ++ K+ P A+ +D G+A
Sbjct: 400 VVKA--GERLKLSKKKAKM-PSASTESRRDWGRGMA 432
Score = 44 (20.5 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 15/67 (22%), Positives = 32/67 (47%)
Query: 96 KSTQTNKASCSQQNTSEQKHGTELMHNEQSEQKHQLCYQIVFDK-PQATSLVDNAT-LQP 153
K T N S++NT++ + +++ + Y I +D+ P++ L N L+P
Sbjct: 173 KRTNGNVNHNSKENTNKLDNVPSTSNSDSVAADEDVIYHIEYDEYPESGILEMNVKDLRP 232
Query: 154 VSKDVSK 160
++ + K
Sbjct: 233 RARTILK 239
>UNIPROTKB|E9PJ24 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284 HGNC:HGNC:24351
ChiTaRS:PHRF1 IPI:IPI00978364 Ensembl:ENST00000533464
UCSC:uc010qwe.2 ArrayExpress:E9PJ24 Bgee:E9PJ24 Uniprot:E9PJ24
Length = 1645
Score = 135 (52.6 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 521 DSED-IYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
+ ED +C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W CP C
Sbjct: 175 EEEDPTFCEVCGRSD--REDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WFCPEC 226
Score = 54 (24.1 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 20/83 (24%), Positives = 26/83 (31%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPA 870
RK+ K P G + R +S E+ K++ R SP
Sbjct: 1063 RKKAKDKSREHRRGPWGHSRRTSRSRSGSPGSSSYEHYESRKKKKRRSASRPRGRECSPT 1122
Query: 871 KSHEG-CSTPGSRGRRHRTSYRK 892
S E C R R H RK
Sbjct: 1123 SSLERLCRHKHQRERSHERPDRK 1145
Score = 53 (23.7 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 810 PRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTE 863
P +R + T+ KTP KS +A KRRG+ K+ +E
Sbjct: 330 PARRKRKTRRRKKVPGRKKTPSGPSAKSKSSATRSKKRQHRVKKRRGK-KVKSE 382
Score = 53 (23.7 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 22/88 (25%), Positives = 38/88 (43%)
Query: 810 PRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISP 869
PR++ K S+S + R R K AK+K E P G + + + SP
Sbjct: 1038 PRRQRSKAKSRRSSSDRSSS---RERAKRKKAKDKSREHRRGPW--GHSRRTSRSRSGSP 1092
Query: 870 -AKSHEGCSTPGSRGRRHRTSYRKLGEE 896
+ S+E + + ++ R++ R G E
Sbjct: 1093 GSSSYEHYES--RKKKKRRSASRPRGRE 1118
Score = 50 (22.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 24/84 (28%), Positives = 38/84 (45%)
Query: 809 GPRKRTKSTKEGSSASPDGKTPVIRRRKSTKAA-KEKLNETENTP--KRRGRPKLNTEDS 865
G +RT ++ GS S + R++K ++A + + E T +R R K E S
Sbjct: 1079 GHSRRTSRSRSGSPGSSSYEHYESRKKKKRRSASRPRGRECSPTSSLERLCRHKHQRERS 1138
Query: 866 NISPAKSHEGCSTPGSRGRRHRTS 889
+ P + E + P R RR R S
Sbjct: 1139 HERPDRK-ESVAWP--RDRRKRRS 1159
Score = 50 (22.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 21/91 (23%), Positives = 38/91 (41%)
Query: 809 GPRKRTKSTKEGSSASPD-GKTPVIRRR---KSTKAAKEKLNETENTPKRRGRPKLNTED 864
G R ++ + SASP G+ R+R KS +++ ++ + E +++ + K
Sbjct: 1016 GTRSESRD-RSSRSASPSVGEERPRRQRSKAKSRRSSSDRSSSRERAKRKKAKDKSREHR 1074
Query: 865 SNI---SPAKSHEGCSTPGSRGRRHRTSYRK 892
S S +PGS H S +K
Sbjct: 1075 RGPWGHSRRTSRSRSGSPGSSSYEHYESRKK 1105
Score = 45 (20.9 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 829 TPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRT 888
T V +R + + + +T K GR K + S AKS S S+ R+HR
Sbjct: 318 TAVYQRPLTPRTPARRKRKTRRRKKVPGRKKTPSGPS----AKSKS--SATRSKKRQHRV 371
Query: 889 SYRKLGEEV 897
R+ G++V
Sbjct: 372 KKRR-GKKV 379
>UNIPROTKB|F8WEF5 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 EMBL:AP006284
HGNC:HGNC:24351 ChiTaRS:PHRF1 IPI:IPI01013297
Ensembl:ENST00000413872 UCSC:uc009ybz.1 ArrayExpress:F8WEF5
Bgee:F8WEF5 Uniprot:F8WEF5
Length = 1647
Score = 135 (52.6 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 521 DSED-IYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
+ ED +C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W CP C
Sbjct: 178 EEEDPTFCEVCGRSD--REDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WFCPEC 229
Score = 54 (24.1 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 20/83 (24%), Positives = 26/83 (31%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPA 870
RK+ K P G + R +S E+ K++ R SP
Sbjct: 1065 RKKAKDKSREHRRGPWGHSRRTSRSRSGSPGSSSYEHYESRKKKKRRSASRPRGRECSPT 1124
Query: 871 KSHEG-CSTPGSRGRRHRTSYRK 892
S E C R R H RK
Sbjct: 1125 SSLERLCRHKHQRERSHERPDRK 1147
Score = 53 (23.7 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 810 PRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTE 863
P +R + T+ KTP KS +A KRRG+ K+ +E
Sbjct: 333 PARRKRKTRRRKKVPGRKKTPSGPSAKSKSSATRSKKRQHRVKKRRGK-KVKSE 385
Score = 53 (23.7 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 22/88 (25%), Positives = 38/88 (43%)
Query: 810 PRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISP 869
PR++ K S+S + R R K AK+K E P G + + + SP
Sbjct: 1040 PRRQRSKAKSRRSSSDRSSS---RERAKRKKAKDKSREHRRGPW--GHSRRTSRSRSGSP 1094
Query: 870 -AKSHEGCSTPGSRGRRHRTSYRKLGEE 896
+ S+E + + ++ R++ R G E
Sbjct: 1095 GSSSYEHYES--RKKKKRRSASRPRGRE 1120
Score = 50 (22.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 24/84 (28%), Positives = 38/84 (45%)
Query: 809 GPRKRTKSTKEGSSASPDGKTPVIRRRKSTKAA-KEKLNETENTP--KRRGRPKLNTEDS 865
G +RT ++ GS S + R++K ++A + + E T +R R K E S
Sbjct: 1081 GHSRRTSRSRSGSPGSSSYEHYESRKKKKRRSASRPRGRECSPTSSLERLCRHKHQRERS 1140
Query: 866 NISPAKSHEGCSTPGSRGRRHRTS 889
+ P + E + P R RR R S
Sbjct: 1141 HERPDRK-ESVAWP--RDRRKRRS 1161
Score = 50 (22.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 21/91 (23%), Positives = 38/91 (41%)
Query: 809 GPRKRTKSTKEGSSASPD-GKTPVIRRR---KSTKAAKEKLNETENTPKRRGRPKLNTED 864
G R ++ + SASP G+ R+R KS +++ ++ + E +++ + K
Sbjct: 1018 GTRSESRD-RSSRSASPSVGEERPRRQRSKAKSRRSSSDRSSSRERAKRKKAKDKSREHR 1076
Query: 865 SNI---SPAKSHEGCSTPGSRGRRHRTSYRK 892
S S +PGS H S +K
Sbjct: 1077 RGPWGHSRRTSRSRSGSPGSSSYEHYESRKK 1107
Score = 45 (20.9 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 829 TPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRT 888
T V +R + + + +T K GR K + S AKS S S+ R+HR
Sbjct: 321 TAVYQRPLTPRTPARRKRKTRRRKKVPGRKKTPSGPS----AKSKS--SATRSKKRQHRV 374
Query: 889 SYRKLGEEV 897
R+ G++V
Sbjct: 375 KKRR-GKKV 382
>TAIR|locus:2089606 [details] [associations]
symbol:AT3G14740 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016
SMART:SM00249 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AB023038 KO:K11380
EMBL:AB493614 IPI:IPI00516474 RefSeq:NP_974313.1 UniGene:At.39180
ProteinModelPortal:Q9LUC1 SMR:Q9LUC1 STRING:Q9LUC1
EnsemblPlants:AT3G14740.2 GeneID:820702 KEGG:ath:AT3G14740
TAIR:At3g14740 HOGENOM:HOG000090334 InParanoid:Q9LUC1 OMA:CVIECSE
PhylomeDB:Q9LUC1 ProtClustDB:CLSN2688382 Genevestigator:Q9LUC1
Uniprot:Q9LUC1
Length = 343
Score = 127 (49.8 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 41/116 (35%), Positives = 59/116 (50%)
Query: 469 LSVEKLKP---EKELQRATSEILRRKLKIR--DLFQRLDSLCAGGFPKSLFDSEGQIDSE 523
L+VE KP EK +++ ++ + L++ D + +D L G K+L S+ +++ E
Sbjct: 93 LNVE-YKPYVEEKSIEKKSTLNVESSLEVEEDDDKENIDPLGKG---KALDLSDREVEDE 148
Query: 524 D-IYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
D I CA C S D N I+ CDG CD H C PL+K IP D W C C
Sbjct: 149 DGIMCAVCQSTDGDPLNPIVFCDG-CDLMVHASCYGNPLVKA-IPEGD--WFCRQC 200
>UNIPROTKB|F1P4F7 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005657 "replication fork" evidence=IEA] [GO:0010216
"maintenance of DNA methylation" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0031493 "nucleosomal histone binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00249
SMART:SM00466 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 GO:GO:0000792
Gene3D:2.30.30.30 InterPro:IPR014722 Gene3D:2.30.280.10
GeneTree:ENSGT00390000008296 OMA:HVEPGLQ InterPro:IPR021991
Pfam:PF12148 EMBL:AADN02062015 IPI:IPI00586414
Ensembl:ENSGALT00000006575 Uniprot:F1P4F7
Length = 733
Score = 132 (51.5 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 36/96 (37%), Positives = 49/96 (51%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG K D + +CD CD FH YCL PPL IP DDE W CP +C+ D +
Sbjct: 274 CHICGGKQ-DPDKQL-MCD-ECDMAFHIYCLNPPL--SSIP-DDEDWYCP--ECRNDASE 325
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLA 622
+V L G +L + +K+ A + +D G+A
Sbjct: 326 VV--LAGEKLKESKKKQKM-ASANSSSRRDWGKGMA 358
Score = 48 (22.0 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 833 RRRKSTKAAKEKLNETENTPKR-RGRP-KLNTEDSNI 867
R+RKS A ++ ++ TPK+ + P KL T+ ++
Sbjct: 592 RKRKSAGAEEKVVSSPAGTPKKTKVEPYKLTTQQKSL 628
>FB|FBgn0033015 [details] [associations]
symbol:d4 "d4" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 EMBL:AE013599 GO:GO:0046872 GO:GO:0008270
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 HSSP:Q14839 KO:K13196 UniGene:Dm.487
GeneID:35485 KEGG:dme:Dmel_CG2682 CTD:35485 FlyBase:FBgn0033015
GenomeRNAi:35485 NextBio:793658 EMBL:AY058600 EMBL:AF427473
RefSeq:NP_610163.1 SMR:Q7K3G5 DIP:DIP-18634N IntAct:Q7K3G5
STRING:Q7K3G5 EnsemblMetazoa:FBtr0086082 UCSC:CG2682-RA
InParanoid:Q7K3G5 OMA:SYDKTSS Uniprot:Q7K3G5
Length = 497
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 526 YCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
YC+ CG+ D D+ ++ CD CDRG+H YCL PPL+ PP+ W C C
Sbjct: 444 YCSICGTSD--NDDQLLFCDD-CDRGYHMYCLSPPLVT---PPEGS-WSCKLC 489
>MGI|MGI:2141847 [details] [associations]
symbol:Phrf1 "PHD and ring finger domains 1" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070063 "RNA polymerase binding" evidence=ISO]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00109 SMART:SM00184 SMART:SM00249
MGI:MGI:2141847 Prosite:PS00518 GO:GO:0005634 GO:GO:0035556
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM ChiTaRS:PHRF1
GO:GO:0070063 EMBL:AC108908 EMBL:AC163434 EMBL:BC094566
EMBL:BC138446 EMBL:BC145719 EMBL:AK129387 IPI:IPI00881116
IPI:IPI00881246 RefSeq:NP_001074587.1 UniGene:Mm.248656
ProteinModelPortal:A6H619 SMR:A6H619 STRING:A6H619 PRIDE:A6H619
Ensembl:ENSMUST00000106027 Ensembl:ENSMUST00000122143 GeneID:101471
KEGG:mmu:101471 UCSC:uc009kkb.1 UCSC:uc009kkc.1
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 InParanoid:Q505G1
NextBio:354944 Bgee:A6H619 Genevestigator:A6H619 Uniprot:A6H619
Length = 1682
Score = 137 (53.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 519 QIDSED-IYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPG 577
+ + ED +C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W CP
Sbjct: 179 EAEEEDPTFCEVCGRSD--REDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WFCP- 230
Query: 578 CDCKVDCID 586
+C V +D
Sbjct: 231 -ECTVPGVD 238
Score = 50 (22.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 20/78 (25%), Positives = 32/78 (41%)
Query: 810 PRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKL-NETENTPKRRGRPKLNTEDSNIS 868
P+ T E ++S T R RK TK K+K+ E + T + ++S
Sbjct: 986 PQITTHRIVEFRASSRSRSTSSSRSRKKTKKKKKKVAREHQRTRSSTRSGSRDRTSRSVS 1045
Query: 869 P-AKSHEGCSTPGSRGRR 885
P A+ H ++ RR
Sbjct: 1046 PVAEEHTRRHRAKTKSRR 1063
Score = 45 (20.9 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 19/83 (22%), Positives = 31/83 (37%)
Query: 809 GPRKRTKS--TKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSN 866
G +RT + T E P P I + + + + +T R R K +
Sbjct: 963 GSEERTVTCVTVEEPGVLPSPDAPQITTHRIVEFRAS--SRSRSTSSSRSRKKTKKKKKK 1020
Query: 867 ISPAKSHEGCSTPGSRGRRHRTS 889
+ A+ H+ + G R RTS
Sbjct: 1021 V--AREHQRTRSSTRSGSRDRTS 1041
Score = 44 (20.5 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPA 870
+ R++S GSS+ ++ +RR S ++ E + K R R + D S
Sbjct: 1101 KSRSRSGSPGSSSCERHESKRRKRRHSGSRSRGSSLERDRRHKHRERSR-ERMDKQESVT 1159
Query: 871 KSHE 874
+S E
Sbjct: 1160 RSRE 1163
Score = 42 (19.8 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRR 855
RK+T+S S S G T +R+ + K + + E T + R
Sbjct: 352 RKKTRS--RSSVKSKSGSTRAKKRQHRVRKTKGRKLKNEVTARSR 394
>UNIPROTKB|F1MLK1 [details] [associations]
symbol:RSF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050434 "positive regulation of viral transcription"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043392 "negative
regulation of DNA binding" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0031213 "RSF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0045892 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 GO:GO:0006352 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016584
GO:GO:0006334 GO:GO:0050434 GO:GO:0043392 GO:GO:0031213 OMA:QPRVLPS
EMBL:DAAA02062726 EMBL:DAAA02062727 IPI:IPI00924309
Ensembl:ENSBTAT00000061202 GeneTree:ENSGT00530000064411
Uniprot:F1MLK1
Length = 1355
Score = 145 (56.1 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 47/149 (31%), Positives = 70/149 (46%)
Query: 448 LNRINYEQNLIDAYSSEGWKGLSVEKLKPEKELQRATSEILRR-KLKIRDLFQRLDSLCA 506
L + + ++NL A K V K+KP+ +++ S R K D + DS +
Sbjct: 730 LQKTDKKENLKKAEKDTNSK---VAKVKPKGKVRWTGSRTRGRWKYSSNDESEGSDSEKS 786
Query: 507 GGFPKSLFDSEGQ---IDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLK 563
+ + E + + +D C KCG + I+LCD +CD G+H CL PPL+
Sbjct: 787 SAASEEEEEKESEEAILADDDEPCKKCGLPN--HPELILLCD-SCDSGYHTACLRPPLM- 842
Query: 564 EDIPPDDEGWLCPGCDCKVDCIDLVNELQ 592
I PD E W CP C K+ C L +LQ
Sbjct: 843 --IIPDGE-WFCPPCQHKLLCEKLEEQLQ 868
Score = 48 (22.0 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 19/78 (24%), Positives = 33/78 (42%)
Query: 833 RRRKSTKAAKEKLN-----ETENTPK--RRGRPKLNTEDSNISPAKSHEGCSTPGSR--- 882
RRR+S + K ++N E++ + K RRG+ +S + S E + S
Sbjct: 1119 RRRRSRRNQKRQINYKEDSESDGSQKSLRRGKEIRRVHKRRLSSSDSEESYMSKNSEDDE 1178
Query: 883 -GRRHRTSYRKLGEEVTQ 899
+ + S RK G +
Sbjct: 1179 LAKESKRSVRKRGRSTDE 1196
Score = 44 (20.5 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 15/62 (24%), Positives = 25/62 (40%)
Query: 819 EGSSASPDGKTPVIRRRKSTKAAKEK-LNETENTPKRRGRPKLNTEDSNISPAKSHEGCS 877
E + + K V +R +ST E E E P R+ ++ T++ S +H
Sbjct: 1175 EDDELAKESKRSVRKRGRSTDEYSEADEEEEEGKPSRKRLHRIETDEEE-SCDNAHGDAD 1233
Query: 878 TP 879
P
Sbjct: 1234 QP 1235
Score = 37 (18.1 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 94 MRKSTQTNKASCSQQNTSEQKHGTELMHNEQSEQK 128
++ S+Q + +S + E++ E +Q EQK
Sbjct: 140 LKNSSQQDSSSRESPSLEEEETKKEEETTKQEEQK 174
>UNIPROTKB|Q96PU4 [details] [associations]
symbol:UHRF2 "E3 ubiquitin-protein ligase UHRF2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0005720 "nuclear heterochromatin"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0071158 "positive regulation of cell cycle arrest"
evidence=IDA] [GO:0042393 "histone binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IEP] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=IEP] [GO:0051726 "regulation of cell cycle" evidence=TAS]
[GO:0051865 "protein autoubiquitination" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0030154 GO:GO:0071158 GO:GO:0046872
GO:GO:0003677 GO:GO:0008283 GO:GO:0008270 GO:GO:0005720
GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 PROSITE:PS01359
GO:GO:0004842 GO:GO:0042393 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 EMBL:AL353718 eggNOG:COG3440 Gene3D:2.30.280.10
HOGENOM:HOG000124662 HOVERGEN:HBG059298 InterPro:IPR021991
Pfam:PF12148 OrthoDB:EOG408N7M EMBL:AB071698 EMBL:AF274049
EMBL:AL133480 EMBL:BC028397 EMBL:AL137728 IPI:IPI00044681
IPI:IPI00395464 RefSeq:NP_690856.1 UniGene:Hs.493401 PDB:1WY8
PDB:1Z6U PDB:2E6S PDB:3OLN PDBsum:1WY8 PDBsum:1Z6U PDBsum:2E6S
PDBsum:3OLN ProteinModelPortal:Q96PU4 SMR:Q96PU4 IntAct:Q96PU4
MINT:MINT-1196856 STRING:Q96PU4 PhosphoSite:Q96PU4 DMDM:67462076
PaxDb:Q96PU4 PeptideAtlas:Q96PU4 PRIDE:Q96PU4 DNASU:115426
Ensembl:ENST00000276893 Ensembl:ENST00000450508
Ensembl:ENST00000468435 GeneID:115426 KEGG:hsa:115426
UCSC:uc003zjy.3 CTD:115426 GeneCards:GC09P006405 HGNC:HGNC:12557
HPA:HPA026633 HPA:HPA026697 neXtProt:NX_Q96PU4 PharmGKB:PA37197
InParanoid:Q96PU4 KO:K15713 OMA:VNHNSKE ChiTaRS:UHRF2
EvolutionaryTrace:Q96PU4 GenomeRNAi:115426 NextBio:79598
ArrayExpress:Q96PU4 Bgee:Q96PU4 CleanEx:HS_UHRF2
Genevestigator:Q96PU4 GermOnline:ENSG00000147854 Uniprot:Q96PU4
Length = 802
Score = 130 (50.8 bits), Expect = 0.00015, P = 0.00015
Identities = 35/96 (36%), Positives = 48/96 (50%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG K N +LCD C+ +H YCL PPL D P++E W CP C K D +
Sbjct: 347 CRVCGGKH--EPNMQLLCD-ECNVAYHIYCLNPPL---DKVPEEEYWYCPSC--KTDSSE 398
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLA 622
+V G RL ++ K+ P A+ +D G+A
Sbjct: 399 VVKA--GERLKMSKKKAKM-PSASTESRRDWGRGMA 431
>UNIPROTKB|B6CHA3 [details] [associations]
symbol:uhrf1 "E3 ubiquitin-protein ligase UHRF1"
species:8355 "Xenopus laevis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000790 "nuclear chromatin" evidence=ISS] [GO:0000791
"euchromatin" evidence=ISS] [GO:0000792 "heterochromatin"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005657 "replication fork" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010216
"maintenance of DNA methylation" evidence=ISS] [GO:0016574 "histone
ubiquitination" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0044729 "hemi-methylated DNA-binding" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 UniPathway:UPA00143
Prosite:PS00299 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0000122 GO:GO:0007049 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787
GO:GO:0051865 GO:GO:0000792 GO:GO:0005657 GO:GO:0016574
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
KO:K10638 Gene3D:2.30.280.10 CTD:29128 HOVERGEN:HBG059298
GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148 EMBL:EU177101
RefSeq:NP_001129236.1 UniGene:Xl.23750 ProteinModelPortal:B6CHA3
GeneID:432234 KEGG:xla:432234 Xenbase:XB-GENE-5821540
Uniprot:B6CHA3
Length = 772
Score = 130 (50.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 30/70 (42%), Positives = 38/70 (54%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG K + + LCD CD FH YCL+PPL + P DE W CP DC+ D +
Sbjct: 316 CCICGGKQ-DPEKQL-LCD-ECDLAFHIYCLKPPL---SVIPQDEDWYCP--DCRNDASE 367
Query: 587 LVNELQGTRL 596
+V L G +L
Sbjct: 368 VV--LAGEKL 375
Score = 48 (22.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 18/93 (19%), Positives = 39/93 (41%)
Query: 215 SDGVEENLQTISEDLTKVCPVEPSQSPPRDANKSCQAGEISCLQQSSSEQTPEFTPGISS 274
S G+ + +Q + + P + + DA+ C +G Q+ S + E +
Sbjct: 62 SVGLNDIVQLLVRQIPDSFPTKHKECELSDASAGCGSG-----QRDSDSGSGEGAMDVDG 116
Query: 275 HEPSVVNYKLGSQL-EQTELGETSAGELGASLE 306
S++ +G+ L ++ +L + +GA E
Sbjct: 117 QSISIIGENVGTSLYKKNDLVDARDLNMGAWFE 149
>UNIPROTKB|A8DZJ1 [details] [associations]
symbol:baz1b "Tyrosine-protein kinase BAZ1B" species:8355
"Xenopus laevis" [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0004713 "protein tyrosine kinase activity" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0016572 "histone phosphorylation" evidence=ISS] [GO:0035173
"histone kinase activity" evidence=ISS] [GO:0070577 "histone
acetyl-lysine binding" evidence=ISS] InterPro:IPR001841
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00297
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0006974 GO:GO:0004715
GO:GO:0004713 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016585 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 GO:GO:0070577 InterPro:IPR018501 InterPro:IPR013136
Pfam:PF10537 PROSITE:PS50827 PROSITE:PS51136 CTD:9031 KO:K11658
GO:GO:0035173 EMBL:AM084226 EMBL:BC072944 EMBL:BC126047
RefSeq:NP_001136259.1 UniGene:Xl.16009 IntAct:A8DZJ1 PRIDE:A8DZJ1
GeneID:443594 KEGG:xla:443594 Xenbase:XB-GENE-866493 Uniprot:A8DZJ1
Length = 1441
Score = 123 (48.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 37/106 (34%), Positives = 52/106 (49%)
Query: 475 KPEKELQRATSEILRRKLKIRDL--FQRLDSLCAGGFPKSLFDSEGQIDSEDIYCAKCGS 532
K E + S + + K+ IRD F R+ L G + + + SE+ C C
Sbjct: 1104 KKMAEEAKVASAVEKWKVAIRDAQTFSRMHVLL--GMLDACI--KWDMSSENARCKVCRK 1159
Query: 533 KDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
K D+ +ILCD C++ FH +CL P L +IP D E WLCP C
Sbjct: 1160 K--GEDDKLILCD-ECNKAFHLFCLRPVLF--NIP-DGE-WLCPAC 1198
Score = 60 (26.2 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 818 KEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNIS 868
+E S + + + +R +S KAAK K P RRGRP N S +S
Sbjct: 1234 EEESDEEEEEQEMMGQRLRSRKAAKGK----PGRPTRRGRPPKNNTHSRVS 1280
>UNIPROTKB|F1PJN4 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042393 "histone binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ InterPro:IPR021991 Pfam:PF12148 EMBL:AAEX03012542
EMBL:AAEX03012543 EMBL:AAEX03012544 EMBL:AAEX03012540
EMBL:AAEX03012541 Ensembl:ENSCAFT00000030070 Uniprot:F1PJN4
Length = 792
Score = 128 (50.1 bits), Expect = 0.00025, P = 0.00025
Identities = 35/96 (36%), Positives = 48/96 (50%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG K D + +CD CD FH YCL PPL IP +DE W CP +C+ D +
Sbjct: 321 CHLCGGKQ-DPDKQL-MCD-ECDMAFHIYCLRPPL--SSIPKEDE-WYCP--ECRNDASE 372
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLA 622
+V L G +L + K+ A + +D G+A
Sbjct: 373 VV--LAGEKLKESKKKAKM-ASATSSSQRDWGKGMA 405
>UNIPROTKB|B3KV94 [details] [associations]
symbol:JARID1B "cDNA FLJ16281 fis, clone NT2RI3003104,
highly similar to Homo sapiens Jumonji, AT rich interactive domain
1B (RBP2-like) (JARID1B), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:CH471067 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0032453
HOGENOM:HOG000290719 EMBL:AC098934 EMBL:AC104463 UniGene:Hs.443650
HGNC:HGNC:18039 ChiTaRS:KDM5B HOVERGEN:HBG068574 EMBL:AK122752
IPI:IPI00877939 SMR:B3KV94 STRING:B3KV94 Ensembl:ENST00000235790
Uniprot:B3KV94
Length = 1275
Score = 130 (50.8 bits), Expect = 0.00027, P = 0.00027
Identities = 47/151 (31%), Positives = 68/151 (45%)
Query: 468 GLSVEKLKPEKELQRATSEILRRKLKIRDLFQRLDSLCAGGFPKSLFDSEGQIDSEDIY- 526
G K + EKE++ S I + ++ +D + PKS S+ ++ D+Y
Sbjct: 103 GCPTPKCENEKEMK---SSIKQEPIERKDYIVENEK----EKPKSR--SKKATNAVDLYV 153
Query: 527 CAKCGSKDLSADND-IILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCI 585
C CGS + D D ++LCDG CD +H +CL PPL D+P D W CP C + +C
Sbjct: 154 CLLCGSGN---DEDRLLLCDG-CDDSYHTFCLIPPL--HDVPKGD--WRCPKCLAQ-EC- 203
Query: 586 DLVNELQGTRLFITDNWEKVFPEAAAGHNQD 616
E G D + F E A D
Sbjct: 204 SKPQEAFGFEQAARDYTLRTFGEMADAFKSD 234
>MGI|MGI:1338889 [details] [associations]
symbol:Uhrf1 "ubiquitin-like, containing PHD and RING finger
domains, 1" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0000790 "nuclear chromatin" evidence=ISO;IDA]
[GO:0000791 "euchromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO;IDA] [GO:0000987 "core promoter
proximal region sequence-specific DNA binding" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA;TAS] [GO:0005657 "replication fork"
evidence=ISO;IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0008283 "cell proliferation"
evidence=TAS] [GO:0008327 "methyl-CpG binding" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO;IMP]
[GO:0010390 "histone monoubiquitination" evidence=IDA] [GO:0016363
"nuclear matrix" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031493
"nucleosomal histone binding" evidence=IDA] [GO:0032270 "positive
regulation of cellular protein metabolic process" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;IDA]
[GO:0042393 "histone binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISO;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=ISO]
InterPro:IPR001841 InterPro:IPR000626 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628
Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015
SMART:SM00184 SMART:SM00213 SMART:SM00249 SMART:SM00466
UniPathway:UPA00143 MGI:MGI:1338889 Prosite:PS00299 Prosite:PS00518
GO:GO:0046872 GO:GO:0008283 GO:GO:0008270 GO:GO:0006281
GO:GO:0006351 GO:GO:0000122 GO:GO:0007049 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 GO:GO:0016363
GO:GO:0035064 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907
GO:GO:0042787 GO:GO:0051865 GO:GO:0000792 GO:GO:0005657
GO:GO:0010390 GO:GO:0031493 GO:GO:0010216 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0000791 eggNOG:COG3440 KO:K10638
Gene3D:2.30.280.10 CTD:29128 GeneTree:ENSGT00390000008296
HOGENOM:HOG000124662 HOVERGEN:HBG059298 OMA:HVEPGLQ GO:GO:0044729
InterPro:IPR021991 Pfam:PF12148 OrthoDB:EOG408N7M EMBL:D87908
EMBL:AF274046 EMBL:AK075819 EMBL:AK143688 EMBL:AK145376
EMBL:AK145543 EMBL:AK146951 EMBL:AK147046 EMBL:AK150489
EMBL:AK151701 EMBL:AK151837 EMBL:AK152930 EMBL:AK153083
EMBL:AC026385 EMBL:BC022167 EMBL:AB066246 IPI:IPI00130200
RefSeq:NP_001104548.1 RefSeq:NP_001104549.1 RefSeq:NP_001104550.1
RefSeq:NP_035061.3 UniGene:Mm.42196 PDB:2ZKD PDB:2ZKE PDB:2ZKF
PDB:2ZKG PDB:2ZO0 PDB:2ZO1 PDB:2ZO2 PDB:3F8I PDB:3F8J PDB:3FDE
PDBsum:2ZKD PDBsum:2ZKE PDBsum:2ZKF PDBsum:2ZKG PDBsum:2ZO0
PDBsum:2ZO1 PDBsum:2ZO2 PDBsum:3F8I PDBsum:3F8J PDBsum:3FDE
ProteinModelPortal:Q8VDF2 SMR:Q8VDF2 MINT:MINT-1172910
STRING:Q8VDF2 PhosphoSite:Q8VDF2 REPRODUCTION-2DPAGE:Q8VDF2
PRIDE:Q8VDF2 Ensembl:ENSMUST00000001258 Ensembl:ENSMUST00000113035
Ensembl:ENSMUST00000113038 Ensembl:ENSMUST00000113039 GeneID:18140
KEGG:mmu:18140 InParanoid:Q8VDF2 EvolutionaryTrace:Q8VDF2
NextBio:293384 Bgee:Q8VDF2 Genevestigator:Q8VDF2
GermOnline:ENSMUSG00000001228 Uniprot:Q8VDF2
Length = 782
Score = 127 (49.8 bits), Expect = 0.00031, P = 0.00031
Identities = 33/96 (34%), Positives = 48/96 (50%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG ++ A +LCD CD FH YCL+PPL +PP+ E W CP C + D +
Sbjct: 323 CHVCGGRE--APEKQLLCD-ECDMAFHLYCLKPPLTS--VPPEPE-WYCPSC--RTDSSE 374
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLA 622
+V G +L + K+ A + +D G+A
Sbjct: 375 VVQA--GEKLKESKKKAKM-ASATSSSRRDWGKGMA 407
>ZFIN|ZDB-GENE-041010-202 [details] [associations]
symbol:baz2a "bromodomain adjacent to zinc finger
domain, 2A" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01429
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982
SMART:SM00249 SMART:SM00297 SMART:SM00384 SMART:SM00391
ZFIN:ZDB-GENE-041010-202 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018501 Pfam:PF02791 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:CR450824
IPI:IPI00928777 Ensembl:ENSDART00000081773 ArrayExpress:F1QRW7
Bgee:F1QRW7 Uniprot:F1QRW7
Length = 1305
Score = 119 (46.9 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 49/152 (32%), Positives = 63/152 (41%)
Query: 447 LLNRINYEQNLIDAYSSEG-WKGLSVEKLKP--------EKELQRAT--SEILRRKLKIR 495
+L N E+N+ + E W V +L P E L + SEI R +R
Sbjct: 988 ILRLANLERNIERRFLKEPLWNAADVVRLAPLTPPPGGEEVPLDAVSLESEITPR---LR 1044
Query: 496 DLFQRLDSLCAGGFPKSL--FDSEGQIDSE----DIYCAKCGSKDLSADNDIILCDGACD 549
Q LD C SL E I E + C C D D ++LCDG CD
Sbjct: 1045 TWRQGLDR-CRSSSQLSLCLLQLEKAIAWERSIIKVTCQVCRKGD--DDEYLLLCDG-CD 1100
Query: 550 RGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCK 581
RG H +CL P +L+ +P D W CP C K
Sbjct: 1101 RGCHMFCLRPKVLQ--VPDGD--WFCPNCVAK 1128
Score = 62 (26.9 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 823 ASPDGKTPVIRR--RKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPG 880
A G++P +R R+ +K K +L E + + R + T +PA S ST
Sbjct: 1127 AKKTGESPRSQRSSRQRSKVRKRRLGEDSSDEEEGFRRSMTTRQKE-TPAPSSSSSSTSI 1185
Query: 881 SRGRRHRTSYR 891
S +R R + R
Sbjct: 1186 SPSKRRRMTTR 1196
>UNIPROTKB|Q9UGL1 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IDA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone H3-K4
demethylation" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0034721 "histone
H3-K4 demethylation, trimethyl-H3-K4-specific" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GO:GO:0034647 KO:K11446
HOGENOM:HOG000290719 HSSP:Q14839 CTD:10765 OrthoDB:EOG4HT8RC
EMBL:AJ132440 EMBL:AF087481 EMBL:AJ243706 EMBL:AC098934
EMBL:AC104463 IPI:IPI00847436 IPI:IPI00873956 RefSeq:NP_006609.3
UniGene:Hs.443650 ProteinModelPortal:Q9UGL1 SMR:Q9UGL1
DIP:DIP-53652N IntAct:Q9UGL1 STRING:Q9UGL1 PhosphoSite:Q9UGL1
DMDM:296439317 PaxDb:Q9UGL1 PRIDE:Q9UGL1 Ensembl:ENST00000367264
Ensembl:ENST00000367265 GeneID:10765 KEGG:hsa:10765 UCSC:uc001gyf.3
UCSC:uc009xag.3 GeneCards:GC01M202696 H-InvDB:HIX0001478
HGNC:HGNC:18039 HPA:HPA027179 MIM:605393 neXtProt:NX_Q9UGL1
PharmGKB:PA164721626 InParanoid:Q9UGL1 OMA:CENEKEM ChiTaRS:KDM5B
GenomeRNAi:10765 NextBio:40877 ArrayExpress:Q9UGL1 Bgee:Q9UGL1
CleanEx:HS_JARID1B Genevestigator:Q9UGL1 Uniprot:Q9UGL1
Length = 1544
Score = 130 (50.8 bits), Expect = 0.00033, P = 0.00033
Identities = 47/151 (31%), Positives = 68/151 (45%)
Query: 468 GLSVEKLKPEKELQRATSEILRRKLKIRDLFQRLDSLCAGGFPKSLFDSEGQIDSEDIY- 526
G K + EKE++ S I + ++ +D + PKS S+ ++ D+Y
Sbjct: 261 GCPTPKCENEKEMK---SSIKQEPIERKDYIVENEK----EKPKSR--SKKATNAVDLYV 311
Query: 527 CAKCGSKDLSADND-IILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCI 585
C CGS + D D ++LCDG CD +H +CL PPL D+P D W CP C + +C
Sbjct: 312 CLLCGSGN---DEDRLLLCDG-CDDSYHTFCLIPPL--HDVPKGD--WRCPKCLAQ-EC- 361
Query: 586 DLVNELQGTRLFITDNWEKVFPEAAAGHNQD 616
E G D + F E A D
Sbjct: 362 SKPQEAFGFEQAARDYTLRTFGEMADAFKSD 392
>UNIPROTKB|F1S4N3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0034647 OMA:CENEKEM
EMBL:CU986276 Ensembl:ENSSSCT00000011960 Uniprot:F1S4N3
Length = 1304
Score = 128 (50.1 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 38/109 (34%), Positives = 52/109 (47%)
Query: 510 PKSLFDSEGQIDSEDIY-CAKCGSKDLSADND-IILCDGACDRGFHQYCLEPPLLKEDIP 567
PKS ++ ++ D+Y C CGS +D D ++LCDG CD +H +CL PPL D+P
Sbjct: 295 PKSR--AKKTTNAVDLYVCLLCGS---GSDEDRLLLCDG-CDDSYHTFCLIPPL--HDVP 346
Query: 568 PDDEGWLCPGCDCKVDCIDLVNELQGTRLFITDNWEKVFPEAAAGHNQD 616
D W CP C + +C E G D + F E A D
Sbjct: 347 KGD--WRCPKCLAQ-EC-SKPQEAFGFEQAARDYTLRTFGEMADAFKSD 391
Score = 52 (23.4 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 479 ELQRATSEILRRKLKIRDLFQRLDSLCA--GGF 509
ELQ +T +I + KI DLFQ L+ L A GGF
Sbjct: 111 ELQGSTLKIPHVERKILDLFQ-LNKLVAEEGGF 142
>UNIPROTKB|F1PJS3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00530000063118 OMA:CENEKEM EMBL:AAEX03004965
Ensembl:ENSCAFT00000016655 Uniprot:F1PJS3
Length = 1476
Score = 129 (50.5 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 39/109 (35%), Positives = 52/109 (47%)
Query: 510 PKSLFDSEGQIDSEDIY-CAKCGSKDLSADND-IILCDGACDRGFHQYCLEPPLLKEDIP 567
PKS S+ ++ D+Y C CGS + D D ++LCDG CD +H +CL PPL D+P
Sbjct: 228 PKSR--SKKTTNAVDLYVCLLCGSGN---DEDRLLLCDG-CDDSYHTFCLIPPL--HDVP 279
Query: 568 PDDEGWLCPGCDCKVDCIDLVNELQGTRLFITDNWEKVFPEAAAGHNQD 616
D W CP C + +C E G D + F E A D
Sbjct: 280 KGD--WRCPKCLAQ-EC-SKPQEAFGFEQAARDYTLRTFGEMADAFKSD 324
Score = 52 (23.4 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 479 ELQRATSEILRRKLKIRDLFQRLDSLCA--GGF 509
ELQ +T +I + KI DLFQ L+ L A GGF
Sbjct: 44 ELQGSTLKIPHVERKILDLFQ-LNKLVAEEGGF 75
>UNIPROTKB|Q96T88 [details] [associations]
symbol:UHRF1 "E3 ubiquitin-protein ligase UHRF1"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IDA] [GO:0008327 "methyl-CpG
binding" evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
[GO:0016574 "histone ubiquitination" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0000791 "euchromatin" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0010216 "maintenance of DNA methylation"
evidence=IMP] [GO:0005657 "replication fork" evidence=IDA]
[GO:0000790 "nuclear chromatin" evidence=ISS;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0044729 "hemi-methylated DNA-binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000987 "core
promoter proximal region sequence-specific DNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2000373
"positive regulation of DNA topoisomerase (ATP-hydrolyzing)
activity" evidence=IC] [GO:0032270 "positive regulation of cellular
protein metabolic process" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IC] [GO:0031493 "nucleosomal histone binding"
evidence=ISS] [GO:0010390 "histone monoubiquitination"
evidence=ISS] [GO:0042802 "identical protein binding" evidence=ISS]
[GO:0016363 "nuclear matrix" evidence=ISS] [GO:0008283 "cell
proliferation" evidence=IEP] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0006281 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0000122 GO:GO:0007049 GO:GO:0000790 GO:GO:0042802
EMBL:CH471139 GO:GO:0000987 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0032270
GO:GO:0004842 GO:GO:0016363 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0010390 GO:GO:0031493
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
GO:GO:0008327 PDB:3T6R PDBsum:3T6R PDB:3DB3 PDBsum:3DB3 PDB:3ASK
PDB:3ASL PDB:4GY5 PDBsum:3ASK PDBsum:3ASL PDBsum:4GY5
eggNOG:COG3440 KO:K10638 Gene3D:2.30.280.10 EMBL:AC027319
GO:GO:2000373 CTD:29128 HOGENOM:HOG000124662 HOVERGEN:HBG059298
GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148 EMBL:AF129507
EMBL:AB177623 EMBL:AB177624 EMBL:AB075601 EMBL:AF274048
EMBL:EF560733 EMBL:AK025578 EMBL:AK289389 EMBL:AK314579
EMBL:AY787925 EMBL:AC053467 EMBL:BC113875 IPI:IPI00797945
RefSeq:NP_001041666.1 RefSeq:NP_037414.3 UniGene:Hs.108106 PDB:2FAZ
PDB:2L3R PDB:2LGG PDB:2LGK PDB:2LGL PDB:2PB7 PDB:3BI7 PDB:3CLZ
PDB:3DB4 PDB:3DWH PDB:3FL2 PDB:3SHB PDB:3SOU PDB:3SOW PDB:3SOX
PDB:3ZVY PDB:3ZVZ PDBsum:2FAZ PDBsum:2L3R PDBsum:2LGG PDBsum:2LGK
PDBsum:2LGL PDBsum:2PB7 PDBsum:3BI7 PDBsum:3CLZ PDBsum:3DB4
PDBsum:3DWH PDBsum:3FL2 PDBsum:3SHB PDBsum:3SOU PDBsum:3SOW
PDBsum:3SOX PDBsum:3ZVY PDBsum:3ZVZ ProteinModelPortal:Q96T88
SMR:Q96T88 IntAct:Q96T88 MINT:MINT-2815626 STRING:Q96T88
PhosphoSite:Q96T88 DMDM:67462077 PaxDb:Q96T88 PRIDE:Q96T88
DNASU:29128 Ensembl:ENST00000262952 Ensembl:ENST00000398240
Ensembl:ENST00000455180 GeneID:29128 KEGG:hsa:29128 UCSC:uc002mbo.3
GeneCards:GC19P004910 HGNC:HGNC:12556 HPA:HPA049408 MIM:607990
neXtProt:NX_Q96T88 PharmGKB:PA37196 InParanoid:Q96T88
OrthoDB:EOG408N7M EvolutionaryTrace:Q96T88 GenomeRNAi:29128
NextBio:52244 ArrayExpress:Q96T88 CleanEx:HS_UHRF1
Genevestigator:Q96T88 GermOnline:ENSG00000034063 Uniprot:Q96T88
Length = 793
Score = 129 (50.5 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 34/96 (35%), Positives = 49/96 (51%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG + D + +CD CD FH YCL+PPL +P +DE W CP +C+ D +
Sbjct: 318 CHLCGGRQ-DPDKQL-MCD-ECDMAFHIYCLDPPL--SSVPSEDE-WYCP--ECRNDASE 369
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLA 622
+V L G RL + K+ A + +D G+A
Sbjct: 370 VV--LAGERLRESKKKAKM-ASATSSSQRDWGKGMA 402
Score = 45 (20.9 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 808 GGPRKRTKSTKEGSSASPDGKTPVIRRRKST-KAAKEKLNETENTPKRRGRP 858
G PR+ +K TK + ++ +IR KS K E L ++ P G P
Sbjct: 660 GSPRRTSKKTKVEPYSLTAQQSSLIREDKSNAKLWNEVLASLKDRPAS-GSP 710
>RGD|1595855 [details] [associations]
symbol:Uhrf1 "ubiquitin-like with PHD and ring finger domains 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0000790 "nuclear chromatin" evidence=ISO;ISS] [GO:0000791
"euchromatin" evidence=ISO;ISS] [GO:0000792 "heterochromatin"
evidence=ISO;ISS] [GO:0000987 "core promoter proximal region
sequence-specific DNA binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0005634
"nucleus" evidence=ISO] [GO:0005657 "replication fork"
evidence=ISO;ISS] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=ISO;ISS] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0008327 "methyl-CpG binding" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO;ISS]
[GO:0010390 "histone monoubiquitination" evidence=IEA;ISO]
[GO:0016363 "nuclear matrix" evidence=IEA;ISO] [GO:0016574 "histone
ubiquitination" evidence=ISO;ISS] [GO:0031493 "nucleosomal histone
binding" evidence=IEA;ISO] [GO:0032270 "positive regulation of
cellular protein metabolic process" evidence=ISO] [GO:0035064
"methylated histone residue binding" evidence=ISO;ISS] [GO:0042393
"histone binding" evidence=ISO;ISS] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISO;ISS] [GO:0051865 "protein autoubiquitination"
evidence=ISO;ISS] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 RGD:1595855
Prosite:PS00299 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0006351 GO:GO:0000122 GO:GO:0007049
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842
GO:GO:0035064 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907
GO:GO:0042787 GO:GO:0051865 GO:GO:0000792 GO:GO:0005657
GO:GO:0016574 GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722
GO:GO:0000791 KO:K10638 Gene3D:2.30.280.10 CTD:29128
HOVERGEN:HBG059298 GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148
EMBL:AY321334 EMBL:BC099224 IPI:IPI00371346 RefSeq:NP_001008882.1
UniGene:Rn.54318 ProteinModelPortal:Q7TPK1 SMR:Q7TPK1 PRIDE:Q7TPK1
GeneID:316129 KEGG:rno:316129 NextBio:670462 Genevestigator:Q7TPK1
Uniprot:Q7TPK1
Length = 774
Score = 125 (49.1 bits), Expect = 0.00051, P = 0.00051
Identities = 33/96 (34%), Positives = 48/96 (50%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG ++ A +LCD CD FH YCL+PPL +PP+ E W CP C + D +
Sbjct: 315 CHICGGRE--APEKQVLCD-ECDMAFHLYCLQPPLTC--VPPEPE-WYCPSC--RTDSSE 366
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLA 622
+V G +L + K+ A + +D G+A
Sbjct: 367 VVQA--GEKLKKSKKKAKM-ASATSSSRRDWGKGMA 399
>UNIPROTKB|F1MUR2 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:DAAA02043305 IPI:IPI01001710
Ensembl:ENSBTAT00000028871 Uniprot:F1MUR2
Length = 1484
Score = 128 (50.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 38/109 (34%), Positives = 52/109 (47%)
Query: 510 PKSLFDSEGQIDSEDIY-CAKCGSKDLSADND-IILCDGACDRGFHQYCLEPPLLKEDIP 567
PKS ++ ++ D+Y C CGS +D D ++LCDG CD +H +CL PPL D+P
Sbjct: 236 PKSR--AKKTTNAVDLYVCLLCGS---GSDEDRLLLCDG-CDDSYHTFCLIPPL--HDVP 287
Query: 568 PDDEGWLCPGCDCKVDCIDLVNELQGTRLFITDNWEKVFPEAAAGHNQD 616
D W CP C + +C E G D + F E A D
Sbjct: 288 KGD--WRCPKCLAQ-EC-SKPQEAFGFEQAARDYTLRTFGEMADAFKSD 332
Score = 52 (23.4 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 479 ELQRATSEILRRKLKIRDLFQRLDSLCA--GGF 509
ELQ +T +I + KI DLFQ L+ L A GGF
Sbjct: 52 ELQGSTLKIPHVERKILDLFQ-LNKLVAEEGGF 83
>ZFIN|ZDB-GENE-030131-624 [details] [associations]
symbol:phrf1 "PHD and ring finger domains 1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518
ZFIN:ZDB-GENE-030131-624 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 GeneTree:ENSGT00530000063661 EMBL:AL928892
Ensembl:ENSDART00000150719 Bgee:H0WEE0 Uniprot:H0WEE0
Length = 1670
Score = 131 (51.2 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 515 DSEGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWL 574
+ + ++D + C CG +D ++ ++LCDG CD G+H CL PPL D P +E W
Sbjct: 173 EEQVEVDLDQTSCEICGGRD--REDRLLLCDG-CDAGYHMECLTPPL---DAVPVEE-WF 225
Query: 575 CPGC 578
CP C
Sbjct: 226 CPEC 229
Score = 50 (22.7 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 18/88 (20%), Positives = 39/88 (44%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPA 870
+ ++K K+ S + K +++ +++ + + + +RR R K + S
Sbjct: 1018 QSQSKDNKQSPSNCQSFHYKDCHKTKHSRSKEKRRSRSRSRDRRRSRSKSKERQRSRSKE 1077
Query: 871 KSH-----EGCSTPGSRGRRHRTSYRKL 893
+ H + CS+ SR R TS +K+
Sbjct: 1078 RKHVHSRDKRCSSSSSRERS--TSGKKV 1103
>RGD|1565602 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA;ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IEA;ISO] [GO:0034720 "histone
H3-K4 demethylation" evidence=ISO] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
RGD:1565602 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 GO:GO:0034647
OrthoDB:EOG4HT8RC IPI:IPI00554242 Ensembl:ENSRNOT00000006290
UCSC:RGD:1565602 Uniprot:D3ZUT4
Length = 1546
Score = 128 (50.1 bits), Expect = 0.00055, P = 0.00055
Identities = 48/151 (31%), Positives = 69/151 (45%)
Query: 468 GLSVEKLKPEKELQRATSEILRRKLKIRDLFQRLDSLCAGGFPKSLFDSEGQIDSEDIY- 526
G + K + EKE++ S I + + +D L+S PKS ++ + D+Y
Sbjct: 261 GCATPKRENEKEVK---STIKQEPTEKKDCV--LESEKDKDKPKSR--AKKTATAVDLYV 313
Query: 527 CAKCGSKDLSADND-IILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCI 585
C CGS + D D ++LCDG CD +H +CL PPL D+P D W CP C + +C
Sbjct: 314 CLLCGSGN---DEDRLLLCDG-CDDSYHTFCLLPPL--HDVPKGD--WRCPKCLAQ-EC- 363
Query: 586 DLVNELQGTRLFITDNWEKVFPEAAAGHNQD 616
E G D + F E A D
Sbjct: 364 SKPQEAFGFEQAARDYTLRTFGEMADAFKSD 394
>UNIPROTKB|K7GSR9 [details] [associations]
symbol:MTF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 InterPro:IPR002999 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 SMART:SM00333
GeneTree:ENSGT00390000009222 EMBL:CU151850 EMBL:CU468387
Ensembl:ENSSSCT00000034081 Uniprot:K7GSR9
Length = 161
Score = 109 (43.4 bits), Expect = 0.00056, P = 0.00056
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 518 GQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPG 577
G S ++ C C + A N++++CD C +G+HQ C P + + DE WLC
Sbjct: 96 GATGSGEMVCTICQEEYSEAPNEMVICD-KCGQGYHQLC-HTPHIDSSVIDSDEKWLCRQ 153
Query: 578 C 578
C
Sbjct: 154 C 154
>UNIPROTKB|Q9P1Y6 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0070063 "RNA polymerase binding" evidence=ISS]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284
PharmGKB:PA164718737 HSSP:Q9UIG0 EMBL:AB040975 EMBL:BC004950
EMBL:BC013381 EMBL:BC029651 EMBL:BC041631 EMBL:BC136615
EMBL:BC144293 EMBL:BC146771 IPI:IPI00001813 IPI:IPI00827706
IPI:IPI00942878 RefSeq:NP_065952.2 UniGene:Hs.325838
ProteinModelPortal:Q9P1Y6 SMR:Q9P1Y6 IntAct:Q9P1Y6 STRING:Q9P1Y6
PhosphoSite:Q9P1Y6 DMDM:296439275 PaxDb:Q9P1Y6 PRIDE:Q9P1Y6
Ensembl:ENST00000264555 Ensembl:ENST00000416188
Ensembl:ENST00000534320 GeneID:57661 KEGG:hsa:57661 UCSC:uc001lqe.3
UCSC:uc010qwc.2 CTD:57661 GeneCards:GC11P000567 H-InvDB:HIX0201594
HGNC:HGNC:24351 HPA:HPA019867 MIM:611780 neXtProt:NX_Q9P1Y6
PharmGKB:PA164724459 eggNOG:NOG300312 HOVERGEN:HBG108250
InParanoid:Q9P1Y6 OMA:YMKKLHM OrthoDB:EOG4MSD0F ChiTaRS:PHRF1
GenomeRNAi:57661 NextBio:64425 ArrayExpress:Q9P1Y6 Bgee:Q9P1Y6
CleanEx:HS_PHRF1 Genevestigator:Q9P1Y6 GO:GO:0070063 Uniprot:Q9P1Y6
Length = 1649
Score = 135 (52.6 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 521 DSED-IYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
+ ED +C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W CP C
Sbjct: 179 EEEDPTFCEVCGRSD--REDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WFCPEC 230
Score = 54 (24.1 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 20/83 (24%), Positives = 26/83 (31%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPA 870
RK+ K P G + R +S E+ K++ R SP
Sbjct: 1067 RKKAKDKSREHRRGPWGHSRRTSRSRSGSPGSSSYEHYESRKKKKRRSASRPRGRECSPT 1126
Query: 871 KSHEG-CSTPGSRGRRHRTSYRK 892
S E C R R H RK
Sbjct: 1127 SSLERLCRHKHQRERSHERPDRK 1149
Score = 53 (23.7 bits), Expect = 0.00075, Sum P(3) = 0.00075
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 810 PRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTE 863
P +R + T+ KTP KS +A KRRG+ K+ +E
Sbjct: 334 PARRKRKTRRRKKVPGRKKTPSGPSAKSKSSATRSKKRQHRVKKRRGK-KVKSE 386
Score = 53 (23.7 bits), Expect = 0.00075, Sum P(3) = 0.00075
Identities = 22/88 (25%), Positives = 38/88 (43%)
Query: 810 PRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISP 869
PR++ K S+S + R R K AK+K E P G + + + SP
Sbjct: 1042 PRRQRSKAKSRRSSSDRSSS---RERAKRKKAKDKSREHRRGPW--GHSRRTSRSRSGSP 1096
Query: 870 -AKSHEGCSTPGSRGRRHRTSYRKLGEE 896
+ S+E + + ++ R++ R G E
Sbjct: 1097 GSSSYEHYES--RKKKKRRSASRPRGRE 1122
Score = 38 (18.4 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 88 APPSEDMRKSTQTNKASCSQQNTSEQKHGTELMHNEQSEQK 128
A P+ D +S+ + + SE GT+ SE++
Sbjct: 25 ADPAGDFEESSVGSSGDSGDDSDSEHGDGTDGEDEGASEEE 65
>TAIR|locus:2144841 [details] [associations]
symbol:ATXR5 "AT5G09790" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009555 "pollen
development" evidence=IMP] [GO:0051726 "regulation of cell cycle"
evidence=IEP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0046976 "histone methyltransferase activity
(H3-K27 specific)" evidence=IDA] [GO:0070734 "histone H3-K27
methylation" evidence=IDA] [GO:0006275 "regulation of DNA
replication" evidence=IGI] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 SMART:SM00249 SMART:SM00317 GO:GO:0005634
EMBL:CP002688 GO:GO:0009507 GO:GO:0006275 GO:GO:0009555
GO:GO:0046872 GO:GO:0008270 GO:GO:0051726 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0009294 GO:GO:0046976
IPI:IPI00775647 RefSeq:NP_001078559.1 UniGene:At.27076
ProteinModelPortal:F4KFB9 SMR:F4KFB9 PRIDE:F4KFB9
EnsemblPlants:AT5G09790.2 GeneID:830839 KEGG:ath:AT5G09790
OMA:TFIAEYT ArrayExpress:F4KFB9 Uniprot:F4KFB9
Length = 379
Score = 120 (47.3 bits), Expect = 0.00062, P = 0.00062
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 515 DSEGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWL 574
+ E + ++ C KCGS + D++++LCD CDRGFH CL P +++ I WL
Sbjct: 55 EEEDEDSYSNVTCEKCGSGE--GDDELLLCD-KCDRGFHMKCLRPIVVRVPIGT----WL 107
Query: 575 CPGC 578
C C
Sbjct: 108 CVDC 111
>MGI|MGI:1922855 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IDA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISO] [GO:0034720 "histone H3-K4
demethylation" evidence=ISO;IDA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 MGI:MGI:1922855 GO:GO:0003714 GO:GO:0045892
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 CTD:10765
OrthoDB:EOG4HT8RC OMA:CENEKEM EMBL:AY082429 EMBL:AY082430
EMBL:AK220451 EMBL:BC048180 EMBL:BC057318 EMBL:AK041304
IPI:IPI00330824 IPI:IPI00776332 RefSeq:NP_690855.2 UniGene:Mm.28995
UniGene:Mm.391994 PDB:2EQY PDBsum:2EQY ProteinModelPortal:Q80Y84
SMR:Q80Y84 IntAct:Q80Y84 STRING:Q80Y84 PhosphoSite:Q80Y84
PRIDE:Q80Y84 Ensembl:ENSMUST00000047714 Ensembl:ENSMUST00000112198
GeneID:75605 KEGG:mmu:75605 UCSC:uc007csg.2 UCSC:uc011wsg.1
InParanoid:Q80Y84 EvolutionaryTrace:Q80Y84 NextBio:343484
Bgee:Q80Y84 Genevestigator:Q80Y84 Uniprot:Q80Y84
Length = 1544
Score = 127 (49.8 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 35/95 (36%), Positives = 46/95 (48%)
Query: 524 DIY-CAKCGSKDLSADND-IILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCK 581
D+Y C CGS + D D ++LCDG CD +H +CL PPL D+P D W CP C +
Sbjct: 308 DLYVCLLCGSGN---DEDRLLLCDG-CDDSYHTFCLVPPL--HDVPKGD--WRCPKCLAQ 359
Query: 582 VDCIDLVNELQGTRLFITDNWEKVFPEAAAGHNQD 616
+C + E G D + F E A D
Sbjct: 360 -EC-NKPQEAFGFEQAARDYTLRTFGEMADAFKSD 392
Score = 52 (23.4 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 479 ELQRATSEILRRKLKIRDLFQRLDSLCA--GGF 509
ELQ +T +I + KI DLFQ L+ L A GGF
Sbjct: 112 ELQGSTLKIPHVERKILDLFQ-LNKLVAEEGGF 143
>UNIPROTKB|F1MFX7 [details] [associations]
symbol:F1MFX7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071158 "positive regulation of cell cycle arrest"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0005720 "nuclear
heterochromatin" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00249 SMART:SM00466 Prosite:PS00518 GO:GO:0030154
GO:GO:0071158 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
InterPro:IPR021991 Pfam:PF12148 OMA:VNHNSKE EMBL:DAAA02022659
EMBL:DAAA02022660 EMBL:DAAA02022661 IPI:IPI00687692
Ensembl:ENSBTAT00000027737 Uniprot:F1MFX7
Length = 752
Score = 133 (51.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 35/96 (36%), Positives = 48/96 (50%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG K N +LCD C+ +H YCL PPL D P++E W CP C K D +
Sbjct: 298 CHVCGGKQ--EPNMQVLCD-ECNMAYHIYCLNPPL---DKVPEEEYWYCPSC--KTDSSE 349
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLA 622
+V G RL ++ K+ P A+ +D G+A
Sbjct: 350 VVKA--GERLKMSKKKAKM-PSASTESRRDWGRGMA 382
Score = 38 (18.4 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 13/60 (21%), Positives = 28/60 (46%)
Query: 96 KSTQTNKASCSQQNTSEQKHGTELMHNEQSEQKHQLCYQIVFDK-PQATSLVDNAT-LQP 153
K T N S++NT + + +++ + Y I +D+ P++ ++ N L+P
Sbjct: 123 KRTNGNVNHNSKENTKKLDNVPSTSNSDSVAADEDVIYHIEYDEYPESGTVEINVKDLRP 182
>UNIPROTKB|F1NFV8 [details] [associations]
symbol:BAZ1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000228
"nuclear chromosome" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0008623 "CHRAC" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0046872 GO:GO:0008270 GO:GO:0006261
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000228 OMA:SSFQNNV GO:GO:0008623
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537 SMART:SM00571
PROSITE:PS50827 PROSITE:PS51136 GeneTree:ENSGT00660000095335
EMBL:AADN02003387 EMBL:AADN02003388 EMBL:AADN02003389
IPI:IPI00585200 Ensembl:ENSGALT00000016289 Uniprot:F1NFV8
Length = 1522
Score = 115 (45.5 bits), Expect = 0.00087, Sum P(4) = 0.00087
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
C C K A++ ++LCDG CDRG+H YC+ P L + IP D W CP C
Sbjct: 1114 CKVCRKKG-DAES-MVLCDG-CDRGYHTYCIRPKL--KIIPEGD--WFCPEC 1158
Score = 64 (27.6 bits), Expect = 0.00087, Sum P(4) = 0.00087
Identities = 30/101 (29%), Positives = 44/101 (43%)
Query: 810 PRKRTKSTKEGSSA---SPDG-------KTPVIRRRKSTKAAKEKLNETENTPKRRGRPK 859
PR+R + K + SPD T R + A KL+ + PKRRGR +
Sbjct: 1319 PRRRRRGRKNADNTLENSPDSLGFRIVDSTDSNERVRKYPVAAPKLSLPVSEPKRRGRKR 1378
Query: 860 LNTEDSNISPAKSHEGCSTPGSRGRRHRTS-YRKLGEEVTQ 899
+TE S P S S+ G +G H S + +L E+ +
Sbjct: 1379 QSTESS---PQTSLNRRSS-GRQGGVHELSAFEQLVVELVR 1415
Score = 50 (22.7 bits), Expect = 0.00087, Sum P(4) = 0.00087
Identities = 32/114 (28%), Positives = 51/114 (44%)
Query: 276 EPSVVNYKLGSQLEQTELGET---SAGELGASLELVVKSSIEQ-LKQPEVPITIPSTKTS 331
+PS+ YK+ Q + EL E+ A + L + ++ LKQ P KT
Sbjct: 144 DPSLFKYKV--QPVKKELYESVIVKASQYSRRKHLFSRDRLKLFLKQHCEPHD-GVIKTK 200
Query: 332 ATKHLQSSSDLMEKKSCLEQSETPPNYVANN-SACLGRKGKRATKSLKNNYTVR 384
AT + +L E+ + PP +V + S GR KRA+ S ++N T +
Sbjct: 201 ATSI--AKYNLAEQNYSYFFPDDPPTFVFSPASRRRGRPPKRASISHEDNITAK 252
Score = 39 (18.8 bits), Expect = 0.00087, Sum P(4) = 0.00087
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 462 SSEGWKGLSVEKLKPEKEL 480
++E + L E+LK EKEL
Sbjct: 729 TAEDEEALKQEQLKKEKEL 747
>UNIPROTKB|E2RE69 [details] [associations]
symbol:BAZ1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537 SMART:SM00571
PROSITE:PS50827 PROSITE:PS51136 GeneTree:ENSGT00660000095335
EMBL:AAEX03005669 EMBL:AAEX03005670 Ensembl:ENSCAFT00000021125
NextBio:20855328 Uniprot:E2RE69
Length = 1525
Score = 115 (45.5 bits), Expect = 0.00088, Sum P(4) = 0.00088
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
C C K A+N ++LCDG CDRG H YC+ P L + +P D W CP C
Sbjct: 1119 CKICRKKG-DAEN-MVLCDG-CDRGHHTYCVRPKL--KTVPEGD--WFCPEC 1163
Score = 63 (27.2 bits), Expect = 0.00088, Sum P(4) = 0.00088
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAK----EKLNETENTPKRRGRPKLNTEDSN 866
RK +T E S P+ + VI + S K+ KL+ ++ KRRGR + +TE S
Sbjct: 1330 RKSANNTPENSPNFPNFR--VIATKSSEKSRSLNVTSKLSLQDSESKRRGRKRQSTESSP 1387
Query: 867 ISPAKSHEG 875
++ + G
Sbjct: 1388 MTLNRRSSG 1396
Score = 52 (23.4 bits), Expect = 0.00088, Sum P(4) = 0.00088
Identities = 43/224 (19%), Positives = 83/224 (37%)
Query: 6 HMGVSPSQVTSSTRDHSCLKQTTPEQMCKFCAECIHSEPLESKSLLGSEAVENEPRETSI 65
H+ S + VTS+ + K+ + C E S P K L + + P E
Sbjct: 524 HILASGADVTSANAKYRYQKRGGFDATDDACMELRLSNPSLVKKLASTSVYDLTPGE--- 580
Query: 66 PNSEKLQAFCGDVPDSSFT-DHLAPPSEDMRKSTQTNKASCSQQNTSEQKHGTELMHN-- 122
+ L A CG + T D + + +R++ Q + ++Q+ E++ +
Sbjct: 581 -KMKILHALCGKLLTLVSTRDFIEDYVDILRQAKQEFRELKAEQHRKEREEAAARIRKRK 639
Query: 123 ----EQSEQKHQLCYQIVFDKPQATSLVDNATLQPVSKDVSKSSQTGNRQALDFLSGNRC 178
++ EQK + + + + Q S D + + +D S+++ + +
Sbjct: 640 EEKLKEQEQKMKEKQEKLKEDEQRNSAADISVGEEEREDFDTSTESKETEQKELDQDTVT 699
Query: 179 NELDVDCVHSEPLNQKH-QLGSEIIQNEPAVN-IARLPSDGVEE 220
+ D H K Q G + + VN + R P EE
Sbjct: 700 EDEDDPGSHKRGRRGKRGQNGFKEFTRQEEVNCVTREPLTADEE 743
Score = 38 (18.4 bits), Expect = 0.00088, Sum P(4) = 0.00088
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 683 SEDDEYNPDAPELDDKVTQE 702
SE++EY D E DD +E
Sbjct: 1206 SEEEEYEIDQDE-DDSQEEE 1224
>UNIPROTKB|J9P748 [details] [associations]
symbol:BAZ1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 CTD:11177
KO:K11655 OMA:SSFQNNV InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537
SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136
GeneTree:ENSGT00660000095335 EMBL:AAEX03005669 EMBL:AAEX03005670
RefSeq:XP_537409.2 Ensembl:ENSCAFT00000046060 GeneID:480287
KEGG:cfa:480287 Uniprot:J9P748
Length = 1557
Score = 115 (45.5 bits), Expect = 0.00096, Sum P(4) = 0.00096
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
C C K A+N ++LCDG CDRG H YC+ P L + +P D W CP C
Sbjct: 1151 CKICRKKG-DAEN-MVLCDG-CDRGHHTYCVRPKL--KTVPEGD--WFCPEC 1195
Score = 63 (27.2 bits), Expect = 0.00096, Sum P(4) = 0.00096
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAK----EKLNETENTPKRRGRPKLNTEDSN 866
RK +T E S P+ + VI + S K+ KL+ ++ KRRGR + +TE S
Sbjct: 1362 RKSANNTPENSPNFPNFR--VIATKSSEKSRSLNVTSKLSLQDSESKRRGRKRQSTESSP 1419
Query: 867 ISPAKSHEG 875
++ + G
Sbjct: 1420 MTLNRRSSG 1428
Score = 52 (23.4 bits), Expect = 0.00096, Sum P(4) = 0.00096
Identities = 43/224 (19%), Positives = 83/224 (37%)
Query: 6 HMGVSPSQVTSSTRDHSCLKQTTPEQMCKFCAECIHSEPLESKSLLGSEAVENEPRETSI 65
H+ S + VTS+ + K+ + C E S P K L + + P E
Sbjct: 556 HILASGADVTSANAKYRYQKRGGFDATDDACMELRLSNPSLVKKLASTSVYDLTPGE--- 612
Query: 66 PNSEKLQAFCGDVPDSSFT-DHLAPPSEDMRKSTQTNKASCSQQNTSEQKHGTELMHN-- 122
+ L A CG + T D + + +R++ Q + ++Q+ E++ +
Sbjct: 613 -KMKILHALCGKLLTLVSTRDFIEDYVDILRQAKQEFRELKAEQHRKEREEAAARIRKRK 671
Query: 123 ----EQSEQKHQLCYQIVFDKPQATSLVDNATLQPVSKDVSKSSQTGNRQALDFLSGNRC 178
++ EQK + + + + Q S D + + +D S+++ + +
Sbjct: 672 EEKLKEQEQKMKEKQEKLKEDEQRNSAADISVGEEEREDFDTSTESKETEQKELDQDTVT 731
Query: 179 NELDVDCVHSEPLNQKH-QLGSEIIQNEPAVN-IARLPSDGVEE 220
+ D H K Q G + + VN + R P EE
Sbjct: 732 EDEDDPGSHKRGRRGKRGQNGFKEFTRQEEVNCVTREPLTADEE 775
Score = 38 (18.4 bits), Expect = 0.00096, Sum P(4) = 0.00096
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 683 SEDDEYNPDAPELDDKVTQE 702
SE++EY D E DD +E
Sbjct: 1238 SEEEEYEIDQDE-DDSQEEE 1256
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.128 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 929 838 0.00081 122 3 11 23 0.37 35
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 51
No. of states in DFA: 619 (66 KB)
Total size of DFA: 422 KB (2201 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 82.78u 0.11s 82.89t Elapsed: 00:00:04
Total cpu time: 82.79u 0.11s 82.90t Elapsed: 00:00:04
Start: Mon May 20 18:21:36 2013 End: Mon May 20 18:21:40 2013