BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002384
(929 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q04996|HAT31_ARATH Homeobox protein HAT3.1 OS=Arabidopsis thaliana GN=HAT3.1 PE=2 SV=3
Length = 723
Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust.
Identities = 221/407 (54%), Positives = 268/407 (65%), Gaps = 44/407 (10%)
Query: 413 VNSIGERKQKKRNKIRRKKIVA--DEYSRIRTHLRYLLNRINYEQNLIDAYSSEGWKGLS 470
NS + KK+NK K V DEY+RI+ LRY LNRINYEQ+LIDAYS EGWKG S
Sbjct: 151 ANSTPVGRPKKKNKTMNKGQVREDDEYTRIKKKLRYFLNRINYEQSLIDAYSLEGWKGSS 210
Query: 471 VEKLKPEKELQRATSEILRRKLKIRDLFQRLDSLCA-GGFPKSLFDSEGQIDSEDIYCAK 529
+EK++PEKEL+RAT EILRRKLKIRDLFQ LD+LCA G P+SLFD++G+I SEDI+CAK
Sbjct: 211 LEKIRPEKELERATKEILRRKLKIRDLFQHLDTLCAEGSLPESLFDTDGEISSEDIFCAK 270
Query: 530 CGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCIDLVN 589
CGSKDLS DNDIILCDG CDRGFHQYCLEPPL KEDIPPDDEGWLCPGCDCK D +DL+N
Sbjct: 271 CGSKDLSVDNDIILCDGFCDRGFHQYCLEPPLRKEDIPPDDEGWLCPGCDCKDDSLDLLN 330
Query: 590 ELQGTRLFITDNWEKVFPEAAA-----GHNQDPNFGLASDDS--------DDNEYDPDGS 636
+ GT+ ++D+WEK+FPEAAA G N D + D +DNE D DGS
Sbjct: 331 DSLGTKFSVSDSWEKIFPEAAAALVGGGQNLDCDLPSDDSDDEEYDPDCLNDNENDEDGS 390
Query: 637 ATDEQDEGDESSSDGSSSDDSDFTSTSDEV-----EAPADDKTYLGLSSEDSEDDEYNPD 691
D+ +ES ++ SSD+++FTS SDE+ E K + L S+DSEDD+Y+PD
Sbjct: 391 -----DDNEESENEDGSSDETEFTSASDEMIESFKEGKDIMKDVMALPSDDSEDDDYDPD 445
Query: 692 APELDDKVTQESSSSGSDFTSDSEDLAAVLEDNRSSGNDEGAASPL---GHSNGQRYKDG 748
AP DD + SS SD TSD+EDL + + + N + +PL G Q D
Sbjct: 446 APTCDD----DKESSNSDCTSDTEDLETSFKGDET--NQQAEDTPLEDPGRQTSQLQGDA 499
Query: 749 GNNESLNNELLSIIKPGQDGAAPVYGKRSSERLDYKKLYDETYGNVP 795
+L DG A V +R+ ERLDYKKLYDE Y NVP
Sbjct: 500 ---------ILESDVGLDDGPAGVSRRRNVERLDYKKLYDEEYDNVP 537
>sp|P48786|PRH_PETCR Pathogenesis-related homeodomain protein OS=Petroselinum crispum
GN=PRH PE=2 SV=1
Length = 1088
Score = 333 bits (855), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 209/401 (52%), Positives = 261/401 (65%), Gaps = 55/401 (13%)
Query: 434 ADEYSRIRTHLRYLLNRINYEQNLIDAYSSEGWKGLSVEKLKPEKELQRATSEILRRKLK 493
DE+ RIRTHLRYLL+RI YE+N +DAYS EGWKG S++K+KPEKEL+RA +EI RKLK
Sbjct: 487 VDEFCRIRTHLRYLLHRIKYEKNFLDAYSGEGWKGQSLDKIKPEKELKRAKAEIFGRKLK 546
Query: 494 IRDLFQRLD-SLCAGGFPKSLFDSEGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGF 552
IRDLFQRLD + G P+ LFDS G+IDSEDI+CAKCGSKD++ NDIILCDGACDRGF
Sbjct: 547 IRDLFQRLDLARSEGRLPEILFDSRGEIDSEDIFCAKCGSKDVTLSNDIILCDGACDRGF 606
Query: 553 HQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCIDLVNELQGTRLFITDNWEKVF----PE 608
HQ+CL+PPLLKE IPPDDEGWLCPGC+CK+DCI L+N+ Q T + + D+WEKVF
Sbjct: 607 HQFCLDPPLLKEYIPPDDEGWLCPGCECKIDCIKLLNDSQETNILLGDSWEKVFAEEAAA 666
Query: 609 AAAGHNQDPNFGLASDDSDDNEYDPDGSATDEQDEGDESSSDGSSSDDSDFTSTSDEVEA 668
AA+G N D N GL SDDS+D++YDP G DE+ +GD+ SS+D+SD+ S SD+++
Sbjct: 667 AASGKNLDDNSGLPSDDSEDDDYDPGGPDLDEKVQGDD-----SSTDESDYQSESDDMQV 721
Query: 669 PADDKTYLGLSSEDSEDDEYNPDAPELDDKVTQESSSSGSDFTSDSEDLAAVLEDNRSSG 728
K GL S+DSEDDEY+P + D++ ++SS SDFTSDSED V +D + +G
Sbjct: 722 -IRQKNSRGLPSDDSEDDEYDPSGL-VTDQMYKDSSC--SDFTSDSEDFTGVFDDYKDTG 777
Query: 729 NDEG-AASPLGHSNGQRYKDGGNNESLNNELLSIIKPGQDGAAPVYGKRSSERLDYKKLY 787
+G AS H NNE P Q AP+Y +R E LDYKKL
Sbjct: 778 KAQGPLASTPDHVR--------NNEE------GCGHPEQGDTAPLYPRRQVESLDYKKLN 823
Query: 788 D--------------------------ETYGNVPYDSSDDE 802
D E YGN DSSD++
Sbjct: 824 DIEFSKMCDILDILSSQLDVIICTGNQEEYGNTSSDSSDED 864
>sp|P46605|HOX1A_MAIZE Homeobox protein HOX1A OS=Zea mays GN=HOX1A PE=2 SV=1
Length = 719
Score = 325 bits (833), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 228/507 (44%), Positives = 296/507 (58%), Gaps = 38/507 (7%)
Query: 343 MEKKSCLEQSETPPNY--VANNSACLGRKGKRATKSLKNN-YTVRSLIGSDRVLRSRSGE 399
+E L S+T PN + N +GK+ ++ L YT+ S RVLRS S
Sbjct: 29 LEHSVLLSTSQTMPNNLGIRKNYKRAANRGKKGSQGLTGQAYTLMSSNSDVRVLRSTSSS 88
Query: 400 RPIPPESSINLADVNSIGERKQKKRNKIRRKKIVADEYSRIRTHLRYLLNRINYEQNLID 459
+ E A V +R++ R K DE+S+IR +RY+LNR+NYEQ+LI+
Sbjct: 89 KTTSTEHV--QAPVQPAAKRRKMSRAS---NKSSTDEFSQIRKRVRYILNRMNYEQSLIE 143
Query: 460 AYSSEGWKGLSVEKLKPEKELQRATSEILRRKLKIRDLFQRLDSLCAGG-FPKSLFDSEG 518
AY+SEGWK S++K++PEKEL+RA SEILR KL+IR++F+ +DSL + G ++LFDSEG
Sbjct: 144 AYASEGWKNQSLDKIRPEKELERAKSEILRCKLRIREVFRNIDSLLSKGKIDETLFDSEG 203
Query: 519 QIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
+I EDI+C+ CGS D + NDIILCDGACDRGFHQ CL PPL EDIP DEGWLCP C
Sbjct: 204 EISCEDIFCSTCGSNDATLGNDIILCDGACDRGFHQNCLNPPLRTEDIPMGDEGWLCPAC 263
Query: 579 DCKVDCIDLVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLASDDSDDNEYDPDGSAT 638
DCK+DCIDL+NEL G+ + I D+WEKVFP+AAA N SDD++ +
Sbjct: 264 DCKIDCIDLINELHGSNISIEDSWEKVFPDAAAMANDSKQDDAFDLPSDDSDDNDFDPNM 323
Query: 639 DEQ-------DEGDESSSDGSSSDDSDFTSTSDEVEAPADDKT-YLGLSSEDSEDDEYNP 690
E+ + +E GS SDDSDF + SD+ E D K L L SEDSEDD+Y+P
Sbjct: 324 PEEHVVGKDEESSEEDEDGGSDSDDSDFLTCSDDSEPLIDKKVDDLRLPSEDSEDDDYDP 383
Query: 691 DAPELDDKVTQESSSSGSDFTSDSEDLAAVLEDNRSSGNDEGAASPL---------GHSN 741
P+ D V ++SSS SDFTSDS+D + SG+DE +SPL
Sbjct: 384 AGPDSDKDVEKKSSSDESDFTSDSDDFCKEIS---KSGHDE-VSSPLLPDAKVGDMEKIT 439
Query: 742 GQRYKDGGNNESLNNELLSIIKPGQDGAAPVYGKRSSERLDYKKLYDETYGNVPYDSSDD 801
Q ++ + E+ Q P +R +ERLDYKKLYDE YG DSSDD
Sbjct: 440 AQAKTTSSADDPMETEI------DQGVVLPDSRRRQAERLDYKKLYDEAYGEASSDSSDD 493
Query: 802 ESWSDDGGPRKRTKSTKEGSSASPDGK 828
E WS P KS +EG + SP GK
Sbjct: 494 EEWSGKNTP--IIKSNEEGEANSPAGK 518
>sp|P48785|PRH_ARATH Pathogenesis-related homeodomain protein OS=Arabidopsis thaliana
GN=PRH PE=2 SV=1
Length = 796
Score = 199 bits (507), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 123/182 (67%), Gaps = 1/182 (0%)
Query: 431 KIVADEYSRIRTHLRYLLNRINYEQNLIDAYSSEGWKGLSVEKLKPEKELQRATSEILRR 490
K+ D+ R++ RYLL ++ +QNLIDAY++EGWKG S EK++P+KEL+RA EIL
Sbjct: 96 KVEVDDSLRLQRRTRYLLIKMKMQQNLIDAYATEGWKGQSREKIRPDKELERARKEILNC 155
Query: 491 KLKIRDLFQRLDSLCA-GGFPKSLFDSEGQIDSEDIYCAKCGSKDLSADNDIILCDGACD 549
KL +RD ++LD L + G + + S+G I + I+CA+C S++ DNDIILCDG C+
Sbjct: 156 KLGLRDAIRQLDLLSSVGSMEEKVIASDGSIHHDHIFCAECNSREAFPDNDIILCDGTCN 215
Query: 550 RGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCIDLVNELQGTRLFITDNWEKVFPEA 609
R FHQ CL+PPL E IPP D+GW C CDCK++ ID +N GT + NW+ +F E
Sbjct: 216 RAFHQKCLDPPLETESIPPGDQGWFCKFCDCKIEIIDTMNAQIGTHFPVDSNWQDIFNEE 275
Query: 610 AA 611
A+
Sbjct: 276 AS 277
>sp|Q96T23|RSF1_HUMAN Remodeling and spacing factor 1 OS=Homo sapiens GN=RSF1 PE=1 SV=2
Length = 1441
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C KCG L ++IL +CD G+H CL PPL+ I PD E W CP C K+ C
Sbjct: 894 CKKCG---LPNHPELILLCDSCDSGYHTACLRPPLM---IIPDGE-WFCPPCQHKLLCEK 946
Query: 587 LVNELQ 592
L +LQ
Sbjct: 947 LEEQLQ 952
>sp|Q9SGH2|MBD9_ARATH Methyl-CpG-binding domain-containing protein 9 OS=Arabidopsis
thaliana GN=MBD9 PE=2 SV=1
Length = 2176
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 25/109 (22%)
Query: 471 VEKLKPEKELQRATSEILRRKLKIRDLFQRLDSLCAGGFPKSLFDSEGQIDSEDIYCAKC 530
V+KLK ++L+ ++E+ K +I+D+ ++ L PK+ +D EG C C
Sbjct: 1250 VQKLKDYRKLECLSAEM---KKEIKDIVVSVNKL-----PKAPWD-EG-------VCKVC 1293
Query: 531 GS-KDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
G KD D+ ++LCD CD +H YCL PPL++ IP D W CP C
Sbjct: 1294 GVDKD---DDSVLLCD-TCDAEYHTYCLNPPLIR--IP--DGNWYCPSC 1334
Score = 34.3 bits (77), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Query: 524 DIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
D C CG + + +++CD AC+RGFH C+ + E P D W+C C
Sbjct: 83 DASCGACGRPE--SIELVVVCD-ACERGFHMSCVNDGV--EAAPSAD--WMCSDC 130
>sp|A6H619|PHRF1_MOUSE PHD and RING finger domain-containing protein 1 OS=Mus musculus
GN=Phrf1 PE=1 SV=2
Length = 1682
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 9/61 (14%)
Query: 526 YCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCI 585
+C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W CP +C V +
Sbjct: 187 FCEVCGRSD--REDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WFCP--ECTVPGV 237
Query: 586 D 586
D
Sbjct: 238 D 238
>sp|A8DZJ1|BAZ1B_XENLA Tyrosine-protein kinase BAZ1B OS=Xenopus laevis GN=baz1b PE=2 SV=2
Length = 1441
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 17/101 (16%)
Query: 482 RATSEILRRKLKIRD--LFQRLDSLCAGGFPKSLFDS--EGQIDSEDIYCAKCGSKDLSA 537
+ S + + K+ IRD F R+ L + D+ + + SE+ C C K
Sbjct: 1111 KVASAVEKWKVAIRDAQTFSRMHVLLG------MLDACIKWDMSSENARCKVCRKK--GE 1162
Query: 538 DNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
D+ +ILCD C++ FH +CL P L +IP D WLCP C
Sbjct: 1163 DDKLILCD-ECNKAFHLFCLRPVLF--NIP--DGEWLCPAC 1198
>sp|Q63625|PHRF1_RAT PHD and RING finger domain-containing protein 1 OS=Rattus
norvegicus GN=Phrf1 PE=1 SV=2
Length = 1685
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 9/61 (14%)
Query: 526 YCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCI 585
+C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W CP +C V +
Sbjct: 190 FCEVCGRSD--REDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WFCP--ECAVPGV 240
Query: 586 D 586
D
Sbjct: 241 D 241
>sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1 OS=Homo sapiens
GN=PHRF1 PE=1 SV=3
Length = 1649
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 7/53 (13%)
Query: 526 YCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
+C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W CP C
Sbjct: 185 FCEVCGRSDR--EDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WFCPEC 230
>sp|Q7TMI3|UHRF2_MOUSE E3 ubiquitin-protein ligase UHRF2 OS=Mus musculus GN=Uhrf2 PE=1
SV=1
Length = 803
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 89/226 (39%), Gaps = 68/226 (30%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C KCG K N +LCD C+ +H YCL PPL D P++E W CP CK D +
Sbjct: 348 CHKCGEK--RDPNMQLLCD-ECNMAYHIYCLSPPL---DKVPEEEYWYCP--SCKTDSSE 399
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLASDDSD-------DNEYDP------ 633
+V G RL ++ K+ P A+ +D G+A N Y P
Sbjct: 400 VVK--AGERLKLSKKKAKM-PSASTESRRDWGRGMACVGRTKECTIVPSNHYGPIPGIPV 456
Query: 634 ----------------------------DGSAT--------DEQDEGDESSSDGSSSDDS 657
DG+ + DE D GDE + GS +
Sbjct: 457 GSTWRFRVQVSEAGVHRPHVGGIHGRSNDGAYSLVLAGGFEDEVDRGDEFTYTGSGGKN- 515
Query: 658 DFTSTSDEVEAPADDKTYLGLSSEDSEDDEYNPDAPELDDKVTQES 703
+ + + AP+ D+T ++ + N DAP LDDK+ ES
Sbjct: 516 --LAGNKRIGAPSADQTLTNMNRALA----LNCDAP-LDDKIGAES 554
>sp|Q18DN4|HMU_HALWD Halomucin OS=Haloquadratum walsbyi (strain DSM 16790) GN=hmu PE=4
SV=1
Length = 9159
Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 31/200 (15%)
Query: 627 DDNEYDPDGSATDEQDEGDESSSDGSSSDDSDFTSTSDEVEAPADDKTYLGLSSEDSEDD 686
DD+ G + QD GD+SSS D+S + D+ + DD S++DS DD
Sbjct: 8381 DDSSNQDSGDDSSNQDSGDDSSSQNDDGDNSSNQDSGDDSSSQNDDGD--NSSNQDSGDD 8438
Query: 687 EYNPDAPELDDKVTQESSSSGSDFTSDSEDLAAVLEDNRSSGNDEGAASPLGHSNGQRYK 746
+ + DD + SG D +S ++D D+ SS ND+G S SN +
Sbjct: 8439 SSSQN----DDGDNSSNQDSGDDSSSQNDD-----GDDSSSQNDDGDNS----SN----Q 8481
Query: 747 DGGNNESLNNELLSIIKPGQDGAAPVYGKRSSERLDYKKLYDETYGNVPYDSSDDESWSD 806
D G++ S N+ G + + G SS + D+ + DS DD S +
Sbjct: 8482 DSGDDSSSQND------DGDNSSNQDSGDDSSSQ------NDDGDNSSNQDSGDDSSSQN 8529
Query: 807 DGGPRKRTKSTKEGSSASPD 826
D G K + G+ + +
Sbjct: 8530 DDGDNKPNSAAAVGAESGSE 8549
Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 607 PEAAA---GHNQDPNFGLASDDS--DDNEYDPDGSATDEQDEGDESSSDGSSSDDSDFTS 661
PE+A NQD ++ DS D + + DG + QD GD+SSS D+S
Sbjct: 8375 PESALEDDSSNQDSGDDSSNQDSGDDSSSQNDDGDNSSNQDSGDDSSSQNDDGDNSSNQD 8434
Query: 662 TSDEVEAPADDKTYLGLSSEDSEDDEYNPD------APELDDKVTQESSSSGSDFTSDSE 715
+ D+ + DD S++DS DD + + + + DD + SG D +S ++
Sbjct: 8435 SGDDSSSQNDDGD--NSSNQDSGDDSSSQNDDGDDSSSQNDDGDNSSNQDSGDDSSSQND 8492
Query: 716 DLAAVLEDNRSSGNDEGAASPLGHSNGQRYKDGGNNESLNNE 757
D N+ SG+D + + G ++ +D G++ S N+
Sbjct: 8493 D--GDNSSNQDSGDDSSSQNDDGDNSSN--QDSGDDSSSQND 8530
Score = 43.9 bits (102), Expect = 0.006, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 9/136 (6%)
Query: 610 AAGHNQDPNFGLASDDSDDNE-YDPDGSATDEQDEGDESSSDGSSSDDSDFTSTSDEVEA 668
++ N D + D DD+ + DG + QD GD+SSS D+S + D+ +
Sbjct: 8401 SSSQNDDGDNSSNQDSGDDSSSQNDDGDNSSNQDSGDDSSSQNDDGDNSSNQDSGDDSSS 8460
Query: 669 PADDKTYLGLSSED----SEDDEYNPDAPELDDKVTQESSSSGSDFTSDSEDLAAVLE-- 722
DD ++D S D + + + DD + SG D +S ++D
Sbjct: 8461 QNDDGDDSSSQNDDGDNSSNQDSGDDSSSQNDDGDNSSNQDSGDDSSSQNDDGDNSSNQD 8520
Query: 723 --DNRSSGNDEGAASP 736
D+ SS ND+G P
Sbjct: 8521 SGDDSSSQNDDGDNKP 8536
Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 623 SDDSDDNE-YDPDGSATDEQDEGDESSSDGSSSDDSDFTSTSDEVEAPADDKTYLGLSSE 681
+DD DD+ + DG + QD GD+SSS D+S + D+ + DD S++
Sbjct: 8462 NDDGDDSSSQNDDGDNSSNQDSGDDSSSQNDDGDNSSNQDSGDDSSSQNDDGD--NSSNQ 8519
Query: 682 DSEDD--EYNPDAPELDDKVTQESSSSGSDFTSDS 714
DS DD N D + + SGS+ ++
Sbjct: 8520 DSGDDSSSQNDDGDNKPNSAAAVGAESGSEMGGET 8554
>sp|A7E320|UHRF1_BOVIN E3 ubiquitin-protein ligase UHRF1 OS=Bos taurus GN=UHRF1 PE=2 SV=1
Length = 786
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 10/63 (15%)
Query: 527 CAKCGSKDLSADNDI-ILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCI 585
C CG K D D ++CD CD FH YCL PPL +PP++E W CP DC++D
Sbjct: 322 CHVCGGKQ---DPDKQLMCD-ECDMAFHIYCLRPPL--SSVPPEEE-WYCP--DCRIDSS 372
Query: 586 DLV 588
++V
Sbjct: 373 EVV 375
>sp|B6CHA3|UHRF1_XENLA E3 ubiquitin-protein ligase UHRF1 OS=Xenopus laevis GN=uhrf1 PE=2
SV=1
Length = 772
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG K +LCD CD FH YCL+PPL + P DE W CP DC+ D +
Sbjct: 316 CCICGGKQDPEKQ--LLCD-ECDLAFHIYCLKPPL---SVIPQDEDWYCP--DCRNDASE 367
Query: 587 LVNELQGTRL 596
+V L G +L
Sbjct: 368 VV--LAGEKL 375
>sp|A2BIL7|BAZ1B_DANRE Tyrosine-protein kinase BAZ1B OS=Danio rerio GN=baz1b PE=1 SV=2
Length = 1536
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 17/101 (16%)
Query: 482 RATSEILRRKLKIRD--LFQRLDSLCAGGFPKSLFDS--EGQIDSEDIYCAKCGSKDLSA 537
R + + + K +R+ F R+ L + D+ + + +E+ C C K
Sbjct: 1162 RVATAVEKWKTAVREAQTFSRMHVLLG------MLDACIKWDMSAENARCKVCRRK--GE 1213
Query: 538 DNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
D+ +ILCD C++ FH +CL P L + IP + WLCP C
Sbjct: 1214 DDKLILCD-ECNKAFHLFCLRPALYR--IPAGE--WLCPAC 1249
>sp|Q96PU4|UHRF2_HUMAN E3 ubiquitin-protein ligase UHRF2 OS=Homo sapiens GN=UHRF2 PE=1
SV=1
Length = 802
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 85/226 (37%), Gaps = 68/226 (30%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG K N +LCD C+ +H YCL PPL D P++E W CP CK D +
Sbjct: 347 CRVCGGK--HEPNMQLLCD-ECNVAYHIYCLNPPL---DKVPEEEYWYCP--SCKTDSSE 398
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLASDDSD-------DNEYDP------ 633
+V G RL ++ K+ P A+ +D G+A N Y P
Sbjct: 399 VVK--AGERLKMSKKKAKM-PSASTESRRDWGRGMACVGRTRECTIVPSNHYGPIPGIPV 455
Query: 634 ------------------------------------DGSATDEQDEGDESSSDGSSSDDS 657
G DE D GDE + GS +
Sbjct: 456 GSTWRFRVQVSEAGVHRPHVGGIHGRSNDGAYSLVLAGGFADEVDRGDEFTYTGSGGKN- 514
Query: 658 DFTSTSDEVEAPADDKTYLGLSSEDSEDDEYNPDAPELDDKVTQES 703
+ + + AP+ D+T ++ + N DAP LDDK+ ES
Sbjct: 515 --LAGNKRIGAPSADQTLTNMNRALA----LNCDAP-LDDKIGAES 553
>sp|Q8VDF2|UHRF1_MOUSE E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus GN=Uhrf1 PE=1
SV=2
Length = 782
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
C CG ++ A +LCD CD FH YCL+PPL +PP+ E W CP C
Sbjct: 323 CHVCGGRE--APEKQLLCD-ECDMAFHLYCLKPPL--TSVPPEPE-WYCPSC 368
>sp|E7EZF3|UHRF1_DANRE E3 ubiquitin-protein ligase UHRF1 OS=Danio rerio GN=uhrf1 PE=1 SV=1
Length = 776
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 527 CAKCGSKDLSADNDI-ILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCI 585
C CG K D D +LCD CD FH YCL PPL PDDE W CP DC+ D
Sbjct: 316 CHVCGIKQ---DPDKQLLCD-ECDMAFHTYCLNPPLT---TIPDDEDWYCP--DCRNDAS 366
Query: 586 DLV 588
++V
Sbjct: 367 EVV 369
>sp|Q7TPK1|UHRF1_RAT E3 ubiquitin-protein ligase UHRF1 OS=Rattus norvegicus GN=Uhrf1
PE=2 SV=2
Length = 774
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
C CG ++ A +LCD CD FH YCL+PPL +PP+ E W CP C
Sbjct: 315 CHICGGRE--APEKQVLCD-ECDMAFHLYCLQPPLTC--VPPEPE-WYCPSC 360
>sp|Q9UGL1|KDM5B_HUMAN Lysine-specific demethylase 5B OS=Homo sapiens GN=KDM5B PE=1 SV=3
Length = 1544
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 10/70 (14%)
Query: 510 PKSLFDSEGQIDSEDIY-CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPP 568
PKS S+ ++ D+Y C CGS + ++ ++LCDG CD +H +CL PPL D+P
Sbjct: 296 PKS--RSKKATNAVDLYVCLLCGSGN--DEDRLLLCDG-CDDSYHTFCLIPPL--HDVPK 348
Query: 569 DDEGWLCPGC 578
D W CP C
Sbjct: 349 GD--WRCPKC 356
>sp|Q80Y84|KDM5B_MOUSE Lysine-specific demethylase 5B OS=Mus musculus GN=Kdm5b PE=1 SV=1
Length = 1544
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 8/56 (14%)
Query: 524 DIY-CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
D+Y C CGS + ++ ++LCDG CD +H +CL PPL D+P D W CP C
Sbjct: 308 DLYVCLLCGSGN--DEDRLLLCDG-CDDSYHTFCLVPPL--HDVPKGD--WRCPKC 356
>sp|Q8VZJ1|ATXR5_ARATH Histone-lysine N-methyltransferase ATXR5 OS=Arabidopsis thaliana
GN=ATXR5 PE=2 SV=1
Length = 352
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 524 DIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
++ C KCGS + D++++LCD CDRGFH CL P +++ I WLC C
Sbjct: 64 NVTCEKCGSGE--GDDELLLCD-KCDRGFHMKCLRPIVVRVPI----GTWLCVDC 111
>sp|Q09819|YAC5_SCHPO Uncharacterized protein C16C9.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC16C9.05 PE=1 SV=1
Length = 404
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Query: 526 YCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCK 581
YC+ CG + L I C+G C FH CLEPPL E+IP + W C C K
Sbjct: 119 YCSACGGRGL-----FICCEG-CPCSFHLSCLEPPLTPENIP--EGSWFCVTCSIK 166
>sp|Q5F3R2|KDM5B_CHICK Lysine-specific demethylase 5B OS=Gallus gallus GN=KDM5B PE=2 SV=1
Length = 1522
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 8/56 (14%)
Query: 524 DIY-CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
D+Y C CGS + ++ ++LCDG CD +H +CL PPL D+P D W CP C
Sbjct: 283 DLYVCLLCGSGN--DEDRLLLCDG-CDDSYHTFCLIPPL--HDVPKGD--WRCPQC 331
>sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens
GN=BAZ1A PE=1 SV=2
Length = 1556
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 8/61 (13%)
Query: 520 IDSEDIYCAKCG--SKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPG 577
I S+ I A+C K A+N ++LCDG CDRG H YC+ P L + +P D W CP
Sbjct: 1141 IWSKSILNARCKICRKKGDAEN-MVLCDG-CDRGHHTYCVRPKL--KTVPEGD--WFCPE 1194
Query: 578 C 578
C
Sbjct: 1195 C 1195
>sp|F6UA42|UHRF1_XENTR E3 ubiquitin-protein ligase UHRF1 OS=Xenopus tropicalis GN=uhrf1
PE=3 SV=2
Length = 775
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG K +LCD CD FH YCL+PPL P DE W CP DC+ D +
Sbjct: 318 CYVCGGKQDPEKQ--LLCD-ECDMAFHIYCLKPPL---SAIPQDEDWYCP--DCRNDASE 369
Query: 587 LV 588
+V
Sbjct: 370 VV 371
>sp|Q9UIG0|BAZ1B_HUMAN Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=BAZ1B PE=1 SV=2
Length = 1483
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 520 IDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
+ +E+ C C K D+ +ILCD C++ FH +CL P L + PD E W CP C
Sbjct: 1180 MSAENARCKVCRKK--GEDDKLILCD-ECNKAFHLFCLRPALYE---VPDGE-WQCPAC 1231
>sp|Q9Z277|BAZ1B_MOUSE Tyrosine-protein kinase BAZ1B OS=Mus musculus GN=Baz1b PE=1 SV=2
Length = 1479
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 520 IDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
+ +E+ C C K D+ +ILCD C++ FH +CL P L + PD E W CP C
Sbjct: 1180 MSAENARCKVCRKK--GEDDKLILCD-ECNKAFHLFCLRPALYE---VPDGE-WQCPAC 1231
>sp|O88379|BAZ1A_MOUSE Bromodomain adjacent to zinc finger domain protein 1A OS=Mus musculus
GN=Baz1a PE=1 SV=3
Length = 1555
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 8/59 (13%)
Query: 522 SEDIYCAKCG--SKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
S+ I A+C K A+N ++LCDG CDRG H YC+ P L + +P D W CP C
Sbjct: 1144 SKSILNARCKICRKKGDAEN-MVLCDG-CDRGHHTYCVRPKL--KAVP--DGDWFCPEC 1196
>sp|Q96T88|UHRF1_HUMAN E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens GN=UHRF1 PE=1
SV=1
Length = 793
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 12/71 (16%)
Query: 527 CAKCGSKDLSADNDI-ILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCI 585
C CG + D D ++CD CD FH YCL+PPL +P +DE W CP +C+ D
Sbjct: 318 CHLCGGRQ---DPDKQLMCD-ECDMAFHIYCLDPPL--SSVPSEDE-WYCP--ECRNDAS 368
Query: 586 DLVNELQGTRL 596
++V L G RL
Sbjct: 369 EVV--LAGERL 377
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 10/57 (17%)
Query: 526 YCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKV 582
YC C D +LC AC +H +CL PPL DIP + WLCP C C V
Sbjct: 458 YCRVC------KDGGELLCCDACISSYHIHCLNPPL--PDIPNGE--WLCPRCTCPV 504
Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 11/61 (18%)
Query: 519 QIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
+ D +D YC C +IILCD C R +H CL+P L D P+ + W CP C
Sbjct: 375 ETDHQD-YCEVC-----QQGGEIILCD-TCPRAYHLVCLDPEL---DRAPEGK-WSCPHC 423
Query: 579 D 579
+
Sbjct: 424 E 424
>sp|Q6IQX0|KD5BB_DANRE Lysine-specific demethylase 5B-B OS=Danio rerio GN=kdm5bb PE=2 SV=2
Length = 1503
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 8/60 (13%)
Query: 520 IDSEDIY-CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
+ D+Y C CG + ++ ++LCDG CD +H +CL PPL D+P D W CP C
Sbjct: 290 VSMVDLYVCLVCGKGN--DEDRLLLCDG-CDDSYHTFCLIPPL--TDVPKGD--WRCPKC 342
>sp|Q9VMJ7|KDM5_DROME Lysine-specific demethylase lid OS=Drosophila melanogaster GN=lid
PE=1 SV=1
Length = 1838
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 13/73 (17%)
Query: 507 GGFPKSLFDSEGQIDSEDIY-CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKED 565
GG P +L +D Y C C D+ + ++LCDG CD +H +CL PPL
Sbjct: 435 GGEPPALI-----VDPLMKYICHICNRGDV--EESMLLCDG-CDDSYHTFCLLPPL--TS 484
Query: 566 IPPDDEGWLCPGC 578
IP + WLCP C
Sbjct: 485 IPKGE--WLCPRC 495
Score = 37.0 bits (84), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 540 DIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
D + CDG C+ FH YC+ L + I PDD+ ++C C
Sbjct: 1770 DWVQCDGGCNEWFHMYCVG--LNRSQIKPDDD-YICIRC 1805
>sp|A9LMC0|DPF3_DANRE Zinc finger protein DPF3 OS=Danio rerio GN=dpf3 PE=2 SV=1
Length = 391
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 12/78 (15%)
Query: 508 GFPKSLFDSEGQIDSEDIY---CAKCGSKDLSA----DNDIILCDGACDRGFHQYCLEPP 560
G P L ++ + + Y C +C S L D+ ++ CD CDRG+H YCL+PP
Sbjct: 305 GHPSCLQFTDNMMQAVRTYQWQCIECKSCSLCGTSENDDQLLFCDD-CDRGYHMYCLKPP 363
Query: 561 LLKEDIPPDDEGWLCPGC 578
+ + P + W C C
Sbjct: 364 MTQ----PPEGSWSCHLC 377
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.127 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 368,723,730
Number of Sequences: 539616
Number of extensions: 16845215
Number of successful extensions: 81136
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 1268
Number of HSP's that attempted gapping in prelim test: 57257
Number of HSP's gapped (non-prelim): 10123
length of query: 929
length of database: 191,569,459
effective HSP length: 127
effective length of query: 802
effective length of database: 123,038,227
effective search space: 98676658054
effective search space used: 98676658054
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 66 (30.0 bits)