Your job contains 1 sequence.
>002385
MGSSKREIELEEQLKDAGNLLLNPPSPVDEVINLLDKVEHLLANVEQAPSRSMRDALLPT
MKGLITNDLLRRSDMDVRLSVTSCISEITRITAPDSPYDDELMKEFFQLAVSAFENLSHA
SGRYYMKALSILDTVAKVRSCLLMLDLECDKLVVEMFQHFLKVIRSNHPHFVFAAMETIM
TLVIDESEDVSWDLLRILLASVRKENQDVSPTSWKLGEKVFTKCAAKLKTNLKEAVQSRG
IALDDYAEIVACICGSDDENPQHGHLIGSENQLATKEPDPPCLGEVVHDVDGISKSVTSN
GTAASRNEDSVVKDKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETEPESAPR
KRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQDSKKEALNLTD
KMLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVSLSTRVEETASGSADF
SLRKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKPLQLSVTKKRRR
SLVVAISAQNISEASGGKKKKTSKGAVKSPNIDENYSEDTPKTEIKRKHTSGKEEKKMIS
KARAKSSDRDGSHSKETPKSEVKKHSVGKEKKKVISKAIAKSSNKNHLEETPTTEIKKKL
TARKEEKKKISKAGAKSLDGNCSAETPKTGVKRKLTAGKEMDSEAPALNEQLVGSRIKVW
WPMDETFYKGVVDNYDPIKKKHRILYADGDEEILNLKKERWELIKGGSSAEEQETDVLKP
DGSSDILPKGKEEIEFELVNEVKASALKRWISRSTPASASKPKAKQSGGGSPAGATINKP
INADESKADLPEKESNPKGDDQNSPAKLILKDRKLIFTLNKQQQAVFKGERHNARDGESA
VDNPVERSKEAVKGSSSNDFGTIVMDDEK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002385
(929 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2116787 - symbol:AT4G31880 species:3702 "Arabi... 752 1.2e-100 2
TAIR|locus:2200557 - symbol:AT1G15940 species:3702 "Arabi... 693 7.5e-94 2
TAIR|locus:2169058 - symbol:AT5G47690 species:3702 "Arabi... 490 6.6e-65 3
TAIR|locus:2025712 - symbol:AT1G80810 species:3702 "Arabi... 622 4.2e-63 2
TAIR|locus:2183750 - symbol:AT5G10950 "AT5G10950" species... 277 9.3e-22 1
UNIPROTKB|E2R7R4 - symbol:PDS5A "Uncharacterized protein"... 196 5.3e-13 2
UNIPROTKB|Q29RF7 - symbol:PDS5A "Sister chromatid cohesio... 196 8.5e-13 2
UNIPROTKB|F1NIQ3 - symbol:PDS5A "Sister chromatid cohesio... 196 2.8e-12 2
UNIPROTKB|Q5F3V3 - symbol:PDS5A "Sister chromatid cohesio... 196 2.8e-12 2
RGD|1307094 - symbol:Pds5a "PDS5, regulator of cohesion m... 196 3.1e-12 3
ZFIN|ZDB-GENE-040426-1612 - symbol:pds5a "PDS5, regulator... 193 5.7e-12 2
SGD|S000004681 - symbol:PDS5 "Protein involved in sister ... 201 8.1e-12 3
UNIPROTKB|E1BKG4 - symbol:E1BKG4 "Uncharacterized protein... 183 9.3e-12 2
UNIPROTKB|I3LU95 - symbol:PDS5A "Uncharacterized protein"... 182 1.2e-11 2
UNIPROTKB|Q5U241 - symbol:pds5b-b "Sister chromatid cohes... 194 1.5e-11 2
POMBASE|SPAC110.02 - symbol:pds5 "cohesin-associated prot... 199 2.3e-11 2
UNIPROTKB|Q4KLU7 - symbol:pds5a-b "Sister chromatid cohes... 191 5.0e-11 2
UNIPROTKB|F1Q0Z0 - symbol:PDS5B "Uncharacterized protein"... 186 8.0e-11 2
UNIPROTKB|F1N7G8 - symbol:PDS5B "Uncharacterized protein"... 186 8.1e-11 2
UNIPROTKB|Q4QXM3 - symbol:pds5a-a "Sister chromatid cohes... 189 8.1e-11 2
UNIPROTKB|Q5F3U9 - symbol:PDS5B "Sister chromatid cohesio... 186 1.5e-10 2
FB|FBgn0260012 - symbol:pds5 species:7227 "Drosophila mel... 188 1.6e-10 1
UNIPROTKB|Q9NTI5 - symbol:PDS5B "Sister chromatid cohesio... 186 1.6e-10 2
ZFIN|ZDB-GENE-091217-2 - symbol:pds5b "PDS5, regulator of... 187 2.0e-10 2
UNIPROTKB|Q498H0 - symbol:pds5b-a "Sister chromatid cohes... 182 2.7e-10 2
ASPGD|ASPL0000065875 - symbol:bimD species:162425 "Emeric... 177 3.0e-10 3
RGD|1310838 - symbol:Pds5b "PDS5, regulator of cohesion m... 186 4.2e-10 2
UNIPROTKB|Q6TRW4 - symbol:Pds5b "Sister chromatid cohesio... 186 4.2e-10 2
UNIPROTKB|F1P3B8 - symbol:PDS5B "Sister chromatid cohesio... 186 1.1e-09 2
MGI|MGI:2140945 - symbol:Pds5b "PDS5, regulator of cohesi... 186 2.8e-09 2
CGD|CAL0006191 - symbol:PDS5 species:5476 "Candida albica... 174 6.6e-08 2
UNIPROTKB|Q5A2J0 - symbol:PDS5 "Putative uncharacterized ... 174 6.6e-08 2
TAIR|locus:2125682 - symbol:AT4G32620 species:3702 "Arabi... 147 2.0e-06 2
TAIR|locus:2132233 - symbol:MSH6 "AT4G02070" species:3702... 144 9.3e-06 1
FB|FBgn0037836 - symbol:CG14692 species:7227 "Drosophila ... 146 1.1e-05 2
DICTYBASE|DDB_G0275929 - symbol:pds5 "sister chromatid co... 130 2.5e-05 2
UNIPROTKB|E1C4G3 - symbol:E1C4G3 "Uncharacterized protein... 113 0.00017 2
FB|FBgn0053526 - symbol:PNUTS "PNUTS" species:7227 "Droso... 125 0.00020 2
CGD|CAL0003874 - symbol:PGA55 species:5476 "Candida albic... 131 0.00025 1
UNIPROTKB|Q59SG9 - symbol:PGA55 "Flocculin-like protein" ... 131 0.00025 1
DICTYBASE|DDB_G0291444 - symbol:DDB_G0291444 species:4468... 90 0.00029 2
DICTYBASE|DDB_G0293562 - symbol:DDB_G0293562 species:4468... 124 0.00040 1
UNIPROTKB|Q08170 - symbol:SRSF4 "Serine/arginine-rich spl... 122 0.00061 1
POMBASE|SPBC1711.05 - symbol:SPBC1711.05 "nucleocytoplasm... 121 0.00067 1
>TAIR|locus:2116787 [details] [associations]
symbol:AT4G31880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA;IDA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] GO:GO:0005829 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR eggNOG:NOG12793 UniGene:At.31705
EMBL:BT002315 IPI:IPI00525095 RefSeq:NP_194916.2 PaxDb:Q8GUP3
PRIDE:Q8GUP3 EnsemblPlants:AT4G31880.1 GeneID:829318
KEGG:ath:AT4G31880 TAIR:At4g31880 HOGENOM:HOG000148306
InParanoid:Q8GUP3 OMA:IATEEVS PhylomeDB:Q8GUP3
ProtClustDB:CLSN2716612 Genevestigator:Q8GUP3 Uniprot:Q8GUP3
Length = 873
Score = 752 (269.8 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 208/611 (34%), Positives = 319/611 (52%)
Query: 4 SKREIELEEQLKDAGNLLLNPPSPVDEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKG 63
S + ELE Q+ +AG L++PPS +DE+++ LDK+ LA VEQ+P SM++AL P MKG
Sbjct: 2 SDSDKELENQIIEAGEKLIDPPSSLDELLSFLDKLFVSLAEVEQSPPDSMQNALTPLMKG 61
Query: 64 LITNDLLRRSDMDVRLSVTSCISEITRITAPDSPYDDELMKEFFQLAVSAFENLSHASGR 123
L+ L + SD+DV+++V +CISEITRITAPD+PYDD+ MKE F+L VS+FE+L S R
Sbjct: 62 LVGGKLFKHSDVDVKVAVAACISEITRITAPDAPYDDDQMKEVFKLIVSSFEDLVDKSSR 121
Query: 124 YYMKALSILDTVAKVRSCLLMLDLECDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLV 183
Y K +SIL+TVAKVRSC++MLDLECD L++EMFQHFLK IR +H VF++ME IMTLV
Sbjct: 122 SYAKRISILETVAKVRSCVVMLDLECDALLIEMFQHFLKAIRDHHSGNVFSSMENIMTLV 181
Query: 184 IDESEDVSWDLLRILLASVRKENQDVSPTSWKLGEKVFTKCAAKLKTNLKEAVQSRGIAL 243
++ESED+ ++L +L SV+K+++ +S S +L E+V + CA+KLKT L EAV+S G+ L
Sbjct: 182 LEESEDIPSEMLSPILHSVKKDDE-ISQVSRRLAEQVLSNCASKLKTYLTEAVKSSGVPL 240
Query: 244 DDYAEIVACICGSDDENPQHGHLIGSENQLAT----KEPDPPCLGEVVH----DV--DGI 293
D Y+ IVA IC Q ++ +E + + +E + E+ D D
Sbjct: 241 DKYSNIVASICEGTFSALQQDQVVANEKEDSQGHIKRETEVEKAAEISTPERTDAPKDES 300
Query: 294 SKSVTSNGTAASRNEDSVVKDKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVK--- 350
KS SNG A +N+ SV D + + ++ E Q + + + +T++ +V+
Sbjct: 301 GKSGVSNGVA-QQNDSSVDTDSMKKQDDTGAKDEPQQLDNPRNTDLNNTTEEKPDVEHQI 359
Query: 351 SETEPESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQD 410
E E ES+ K+ EE + S + P D V + S +
Sbjct: 360 EEKENESSSVKQADLSKDSDIKEETEPAELLDSKDVLTSPPV-----DSSVTAATSSENE 414
Query: 411 SKKEALNLTDKMLADPT----SASLKSGLPDGSHHRR-GRTKKQGSTVNQNADHNSLSVS 465
K L K D T S S+ LP+ S ++ KK+ S+ + S++
Sbjct: 415 KNKSVQILPSKTSGDETANVSSPSMAEELPEQSVPKKTANQKKKESSTEEVKPSASIATE 474
Query: 466 LSTRVEETASGSADFSLRKKPEDRSDTE--IKHRKRSKTNEEISQPPGYGVSEKEAVVPS 523
+ T+ KK S T+ + K+S + ++++ SEK+ V
Sbjct: 475 EVSEEPNTSEPQVTKKSGKKVASSSKTKPTVPPSKKSTSETKVAKQ-----SEKKVVGSD 529
Query: 524 ADKEKPLQLSVTKKRRRSLVVAISAQNISEAXXXXXXXXXXXXXXXPNIDENYS-EDTPK 582
+E KK R + + + S + + E++P
Sbjct: 530 NAQESTKPKEEKKKPGRGKAIDEESLHTSSGDNEKPAVSSGKLASKSKKEAKQTVEESPN 589
Query: 583 TEIKRKHTSGK 593
+ KRK + G+
Sbjct: 590 SNTKRKRSLGQ 600
Score = 266 (98.7 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 67/188 (35%), Positives = 102/188 (54%)
Query: 685 ETPKTGVKRKLTAGKEMDSEAPALNEQLVGSRIKVWWPMDETFYKGVVDNYDPIKKKHRI 744
E+P + KRK + G + A E LVGSRIKVWWPMD+ +YKGVV++YD KKKH +
Sbjct: 586 ESPNSNTKRKRSLG-----QGKASGESLVGSRIKVWWPMDQAYYKGVVESYDAAKKKHLV 640
Query: 745 LYADGDEEILNLKKERWE-LIKGGSSAEEQETDVLKPDGSSDILPKGKEEIEFELVNEVK 803
+Y DGD+EIL LK ++W L + S +E+ D + + +P K+ +
Sbjct: 641 IYDDGDQEILYLKNQKWSPLDESELSQDEEAADQTGQEEDASTVPLTKKAKTGKQSKMDN 700
Query: 804 ASALKRWISRSTPASASKPKAKQSGGGSPAGATINKPINADESKADLPEKESNPKGDDQN 863
+SA K + S+ A A+ P +K S S T +K + D +A E+ S+ + ++
Sbjct: 701 SSAKKGSGAGSSKAKAT-PASKSSKT-SQDDKTASK--SKDSKEASREEEASSEEESEEE 756
Query: 864 SPAKLILK 871
P K + K
Sbjct: 757 EPPKTVGK 764
Score = 74 (31.1 bits), Expect = 2.2e-80, Sum P(2) = 2.2e-80
Identities = 28/103 (27%), Positives = 44/103 (42%)
Query: 765 KGGSSAEEQETDVLKPDGSSDILPKGKEEIEFELVNEVKASALKRWISRSTPASASKPKA 824
K GSS +++ + G S K KEE KA+ + S+S P + K+
Sbjct: 764 KSGSSRSKKDISSVSKSGKSKASSKKKEEPS-------KATTSSK--SKSGPVKSVPAKS 814
Query: 825 KQSGGGSPAGATINKPINADESKADLPEKESNPKGDDQNSPAK 867
K G + +G+ A ES ++ E E PK + + AK
Sbjct: 815 KTGKGKAKSGSASTPASKAKESASE-SESEETPKEPEPATKAK 856
Score = 46 (21.3 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 34/155 (21%), Positives = 56/155 (36%)
Query: 766 GGSSAEEQETDVLKPDGSS-DILPKGKEEIEFELVNEVKASALKRWISRSTPASASKPKA 824
G S++ + T K +S D K + E E +AS S PK
Sbjct: 708 GAGSSKAKATPASKSSKTSQDDKTASKSKDSKEASREEEAS------SEEESEEEEPPKT 761
Query: 825 KQSGGGSPAGATINKPINADESKADLPEKESNPKGDDQNSPAKLILKDRKLIFTLNKQQQ 884
G S + I+ + +SKA +KE P+K + + K
Sbjct: 762 VGKSGSSRSKKDISSVSKSGKSKASSKKKEE---------PSKATTSSKSKSGPV-KSVP 811
Query: 885 AVFKGERHNARDGESAVDNPVERSKEAVKGSSSND 919
A K + A+ G ++ P ++KE+ S S +
Sbjct: 812 AKSKTGKGKAKSGSAST--PASKAKESASESESEE 844
>TAIR|locus:2200557 [details] [associations]
symbol:AT1G15940 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0006306
"DNA methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010050 "vegetative phase change" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=RCA] InterPro:IPR016024 EMBL:CP002684 GO:GO:0005829
GO:GO:0009506 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010924 HOGENOM:HOG000015164 ProtClustDB:CLSN2679925
IPI:IPI00543267 PIR:H86293 RefSeq:NP_173046.2 UniGene:At.28119
ProteinModelPortal:Q9S9P0 PRIDE:Q9S9P0 EnsemblPlants:AT1G15940.1
GeneID:838164 KEGG:ath:AT1G15940 TAIR:At1g15940 InParanoid:Q9S9P0
OMA:METIMIT PhylomeDB:Q9S9P0 Genevestigator:Q9S9P0 Uniprot:Q9S9P0
Length = 990
Score = 693 (249.0 bits), Expect = 7.5e-94, Sum P(2) = 7.5e-94
Identities = 192/553 (34%), Positives = 287/553 (51%)
Query: 7 EIELEEQLKDAGNLLLNPPSPVDEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLIT 66
E E+ L DA LL P D ++LL+ +E LLA VEQ S S++ AL P M+ L++
Sbjct: 9 EFSKEQALTDAAENLLKPHFSTDATLSLLEVMESLLATVEQDLSSSVQKALHPPMRALVS 68
Query: 67 NDLLRRSDMDVRLSVTSCISEITRITAPDSPYDDELMKEFFQLAVSAFENLSHASGRYYM 126
DLLR D DVR+SV SC++EI RITAP++PY+DE MK+ FQ+ + AFE L+ AS R Y
Sbjct: 69 ADLLRNPDSDVRVSVVSCLTEIMRITAPEAPYNDEQMKDIFQVTIEAFEKLADASSRSYR 128
Query: 127 KALSILDTVAKVRSCLLMLDLECDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDE 186
KA IL+TVAKVRS L+MLDLECD LV+EMFQ FLK+IR +HP V +METIM VIDE
Sbjct: 129 KAEVILETVAKVRSSLVMLDLECDDLVLEMFQRFLKIIRPDHPQLVLVSMETIMITVIDE 188
Query: 187 SEDVSWDLLRILLASVRKENQDVSPTSWKLGEKVFTKCAAKLKTNLKEAVQSRGIALDDY 246
SE+V DLL ILL +V+K++QDVSP + L EKV + C KL+ + EA++S G +LD Y
Sbjct: 189 SEEVPMDLLEILLTTVKKDSQDVSPAALTLVEKVLSSCTCKLQPCIMEALKSSGTSLDMY 248
Query: 247 AEIVACICGSDDENPQ-HGHLIGSENQLATKEPDPPCLGEVVHD---VDGISKSVTSNGT 302
+ +V+ IC S+ Q H + +N+ K + G+VV D ++ ++ GT
Sbjct: 249 SPVVSSICQSEFATTQAHNDVKPKDNEADEKISE----GQVVPSDSLEDKLNLGLSRKGT 304
Query: 303 AASRNEDSVVKDKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETEPESAPRKR 362
+ R+ + + + S+S DA+ ++G + KS PE +
Sbjct: 305 RSKRSARGGTRRANGDEKVITANEGLSESTDAETASGSTRKRGWKP-KSLMNPEEGYSFK 363
Query: 363 GRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCSPSLN----QDSKKEALNL 418
+ E G D S K +P + ++ V S S + S+K +
Sbjct: 364 TSSSKKVQEKELG-DSSLGKVAAKKVPLPSKVGQTNQSVVISLSSSGRARTGSRKRSRTK 422
Query: 419 TDKMLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVSLSTRVEETASGSA 478
++ D +S + + + + K+ + N + + S++ E+ +G A
Sbjct: 423 MEETDHDVSSVATQPAKKQ-TVKKTNPAKEDLTKSNVKKHEDGIKTGKSSKKEKADNGLA 481
Query: 479 DFSLRKKPEDR-----SDTEIKHRKRSKTNEE---ISQP-PGYGVSEKE---AVVPSADK 526
S +K + S ++ H K N E + P P S+K+ A P+ K
Sbjct: 482 KTSAKKPLAETMMVKPSGKKLVHSDAKKKNSEGASMDTPIPQSSKSKKKDSRATTPATKK 541
Query: 527 EKPLQLSVTKKRR 539
+ S K +R
Sbjct: 542 SEQAPKSHPKMKR 554
Score = 264 (98.0 bits), Expect = 7.5e-94, Sum P(2) = 7.5e-94
Identities = 76/248 (30%), Positives = 126/248 (50%)
Query: 683 SAETPKTGVKRKLTAGKEMDSEAPALNEQLVGSRIKVWWPMDETFYKGVVDNYDPIKKKH 742
S + PK+ K K AG+E++S L E+LVG R+ VWWP+D+ FY+GV+ +Y +KK H
Sbjct: 542 SEQAPKSHPKMKRIAGEEVESNTNELGEELVGKRVNVWWPLDKKFYEGVIKSYCRVKKMH 601
Query: 743 RILYADGDEEILNLKKERWELIKGGSSA-EEQETDVLKPDGSSDILPKGKEEIEFELVNE 801
++ Y+DGD E LNLKKER+++I+ SSA E++E D+L+ S + + K + +
Sbjct: 602 QVTYSDGDVEELNLKKERFKIIEDKSSASEDKEDDLLESTPLSAFIQREKSKKRKIVSKN 661
Query: 802 VKASALKRWISRSTPASASKPKAKQSGGGSPAGATINKPINADESKADLPEKESNPKGDD 861
V+ S+ S +S K K S S K A ++ ++ PE + G +
Sbjct: 662 VEPSS-----SPEVRSSMQTMKKKDSVTDSIKQTKRTK--GALKAVSNEPESTT---GKN 711
Query: 862 QNSPAKLILKDRKLIFTLNKQQQAVFKGERHNARDGESAVDNPVERSKEAVKGSSSNDFG 921
S KL + K K+Q+ R +D + D + ++++K +D
Sbjct: 712 LKSLKKLNGEPDKTRGRTGKKQKVTQAMHRKIEKDCDEQEDLETKDEEDSLKLGKESDAE 771
Query: 922 TIVMDDEK 929
M+D +
Sbjct: 772 PDRMEDHQ 779
Score = 61 (26.5 bits), Expect = 7.9e-20, Sum P(2) = 7.9e-20
Identities = 77/345 (22%), Positives = 128/345 (37%)
Query: 281 PCLGEVVHD----VDGISKSVTS--NGTAASRNEDSVVKDKLSNVLERCS--QVERSQSI 332
PC+ E + +D S V+S A+ + VK K + E+ S QV S S+
Sbjct: 232 PCIMEALKSSGTSLDMYSPVVSSICQSEFATTQAHNDVKPKDNEADEKISEGQVVPSDSL 291
Query: 333 DAKCSAGPDTSDSLRNVKSETEPESAPRKRGRKPNSLMNPEEGYDHSW---ISSG--RKI 387
+ K + G S + +S+ R R ++ EG S +SG RK
Sbjct: 292 EDKLNLGL----SRKGTRSKRSARGGTR-RANGDEKVITANEGLSESTDAETASGSTRKR 346
Query: 388 AKVPGRRKSDDKGVDCSPSLNQDSKKEALN------LTDKMLADP-----TSASLKSGLP 436
P + ++G S ++ +++ L + K + P T+ S+ L
Sbjct: 347 GWKPKSLMNPEEGYSFKTSSSKKVQEKELGDSSLGKVAAKKVPLPSKVGQTNQSVVISLS 406
Query: 437 DGSHHRRGRTKKQGSTVNQNADHNSLSVSLSTR----VEETASGSADFSLR--KKPEDRS 490
R G ++K+ T + DH+ SV+ V++T D + KK ED
Sbjct: 407 SSGRARTG-SRKRSRTKMEETDHDVSSVATQPAKKQTVKKTNPAKEDLTKSNVKKHEDGI 465
Query: 491 DTEIKHRKRSKTNEEISQPPGYG-VSEKEAVVPSADKEKPLQLSVTKKRRRSLVVAISAQ 549
T K K+ K + +++ ++E V PS K L S KK+ A
Sbjct: 466 KTG-KSSKKEKADNGLAKTSAKKPLAETMMVKPSGKK---LVHSDAKKKNSE-----GAS 516
Query: 550 NISEAXXXXXXXXXXXXXXXPNIDENYSEDTPKTEIKRKHTSGKE 594
+ P + SE PK+ K K +G+E
Sbjct: 517 MDTPIPQSSKSKKKDSRATTPATKK--SEQAPKSHPKMKRIAGEE 559
Score = 50 (22.7 bits), Expect = 2.8e-71, Sum P(2) = 2.8e-71
Identities = 52/233 (22%), Positives = 85/233 (36%)
Query: 676 KSLDGNCSAETPKTGVKRKLTAGK----EMD-SEAPALNEQLVGSRIKVWWPMDETFYKG 730
K L+G +TG K+K+T E D E L + +K+ D +
Sbjct: 716 KKLNGEPDKTRGRTGKKQKVTQAMHRKIEKDCDEQEDLETKDEEDSLKLGKESDAEPDR- 774
Query: 731 VVDNYDPIKKKHRI-LYADGDEEILNLKKERWELIKGGSSAEEQETD-----VLK----- 779
++++ + + H + DG+E+ + G E ETD LK
Sbjct: 775 -MEDHQELPENHNVETKTDGEEQEAAKEPTAESKTNGEEPNAEPETDGKEHKSLKEPNAE 833
Query: 780 PDGSSDILPKGKE-EIEFELVNEVKASALKRWISRSTPASASKPKAKQSGGGSPAGATIN 838
P + KE E + E + +A + R T K A + S +
Sbjct: 834 PKSDGEEQEAAKEPNAELKTDGENQEAAKELTAERKTDEEEHKV-ADEVEQKSQKETNVE 892
Query: 839 KPINADESKA-DLPEKESNPKGDDQNSPAKLILKDRKLIFTLNKQQQAVFKGE 890
+E K+ + P E K +++ S AK D KLI K+ + KGE
Sbjct: 893 PEAEGEEQKSVEEPNAEPKTKVEEKES-AKEQTADTKLI---EKEDMSKTKGE 941
>TAIR|locus:2169058 [details] [associations]
symbol:AT5G47690 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA;IDA] [GO:0007067 "mitosis" evidence=RCA]
InterPro:IPR016024 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
EMBL:CP002688 GO:GO:0009507 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB016886 KO:K11267 eggNOG:NOG268017
OMA:NMIARRI IPI:IPI00892180 RefSeq:NP_001119390.1 UniGene:At.44744
ProteinModelPortal:B3H5K3 SMR:B3H5K3 PaxDb:B3H5K3 PRIDE:B3H5K3
EnsemblPlants:AT5G47690.3 GeneID:834820 KEGG:ath:AT5G47690
TAIR:At5g47690 HOGENOM:HOG000064635 PhylomeDB:B3H5K3
ProtClustDB:CLSN2702261 Genevestigator:B3H5K3 Uniprot:B3H5K3
Length = 1607
Score = 490 (177.5 bits), Expect = 6.6e-65, Sum P(3) = 6.6e-65
Identities = 99/224 (44%), Positives = 148/224 (66%)
Query: 11 EEQLKDAGNLLLNPPSPVDEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLL 70
EEQLK+ G+ L P D ++ LL + L+ +EQ+P ++ ++ P + +I ++L
Sbjct: 6 EEQLKELGSKLDLAPVSKDSLLKLLKEAAVCLSELEQSPPPAVLKSIQPFLDAVIKPEIL 65
Query: 71 RRSDMDVRLSVTSCISEITRITAPDSPYDDELMKEFFQLAVSAFENLSHASGRYYMKALS 130
D DV+L V SC+SEITRITAP++PY D +MK+ FQL VSAF L+ SG + + +
Sbjct: 66 NHQDKDVKLLVASCVSEITRITAPEAPYSDNIMKDIFQLIVSAFAGLNDVSGPSFGRRVL 125
Query: 131 ILDTVAKVRSCLLMLDLECDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDV 190
IL+TVAK RSC++MLDLECD LV E+F FL V R +HP VF++M+ IM ++++ESEDV
Sbjct: 126 ILETVAKYRSCVVMLDLECDDLVKEVFTTFLDVARDDHPEIVFSSMQNIMIVLLEESEDV 185
Query: 191 SWDLLRILLASVRKENQDVSPTSWKLGEKVFTKCAAKLKTNLKE 234
LL ILL+ + + DV + +L KV CA K+++++K+
Sbjct: 186 QEHLLLILLSKLGRNRSDVRDAARRLAMKVIEHCAPKVESDIKQ 229
Score = 261 (96.9 bits), Expect = 6.6e-65, Sum P(3) = 6.6e-65
Identities = 79/248 (31%), Positives = 119/248 (47%)
Query: 692 KRKLTAG--KEMDSEAPALNEQLVGSRIKVWWPMDETFYKGVVDNYDPIKKKHRILYADG 749
KRK +G K E +N++L+G RI+VWWPMD+ FY+G V +YD K++H ILY DG
Sbjct: 1346 KRKNVSGLAKCSTKENKLVNDELIGCRIEVWWPMDKRFYEGTVKSYDSTKQRHVILYEDG 1405
Query: 750 DEEILNLKKERWELIK-GGSSAEEQETDV-----LKPDGSSDILPKGKEEIEFELVNEVK 803
D E+LNLKKE+WELI GG +A++ T + GS P G + E + K
Sbjct: 1406 DVEVLNLKKEQWELIDTGGKTAKKSRTSKGNSKKKRSSGSKPKNPDGVQRDEDPVTTTPK 1465
Query: 804 ASA-----LKRWISRSTPASASKPKAKQSGGGSPAGATINKPINADES-KADLPEKESNP 857
LK+ + TP S S K ++ PI + S +A + ES
Sbjct: 1466 GKRTPKKNLKQLHPKDTPKSLSLEHEKVESRNKKRRSSA-LPIETEYSGEAGEEKSESEG 1524
Query: 858 KG-DDQNSPAKLILKDRKLIFTLNKQQ-QAVFKGERHNARDGESAVDNPVERSKEAVKGS 915
K + +++ K+ L + A K H+ D E +N E +EA + +
Sbjct: 1525 KSLKEGEDDEEVVNKEEDLQEAKTESSGDAEGKEAEHDDSDTEGKQENN-EMEREAEENA 1583
Query: 916 SSNDFGTI 923
++D T+
Sbjct: 1584 ETSDNETL 1591
Score = 61 (26.5 bits), Expect = 6.1e-44, Sum P(2) = 6.1e-44
Identities = 36/159 (22%), Positives = 60/159 (37%)
Query: 350 KSETEPESAPRKR--GRKPNSLMNPEEGY-DHSWISSGRKIAKVPGRRKSDDKGVDCSPS 406
KS T ++ +KR G KP NP+ D +++ K + P + D S
Sbjct: 1429 KSRTSKGNSKKKRSSGSKPK---NPDGVQRDEDPVTTTPKGKRTPKKNLKQLHPKDTPKS 1485
Query: 407 LNQDSKK-EALNLTDKMLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVS 465
L+ + +K E+ N + A P + G++ K+G D ++
Sbjct: 1486 LSLEHEKVESRNKKRRSSALPIETEYSGEAGEEKSESEGKSLKEGED-----DEEVVNKE 1540
Query: 466 LSTRVEETASGSADFSLRKKPEDRSDTEIKHRKRSKTNE 504
+ +T S S D ++ D SDTE K E
Sbjct: 1541 EDLQEAKTES-SGDAEGKEAEHDDSDTEGKQENNEMERE 1578
Score = 47 (21.6 bits), Expect = 6.6e-65, Sum P(3) = 6.6e-65
Identities = 34/146 (23%), Positives = 60/146 (41%)
Query: 341 DTSDSLRNVKSETEPESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSD-DK 399
D + RNV T S P++R + +S +P + + +S K ++ +SD DK
Sbjct: 1222 DQKGNKRNVGDATSVVSVPKRR--RSSSGHSPYK-FSNSGPKVQLKASEDELHLESDMDK 1278
Query: 400 GVDC-SPSLNQDSKKEALNLTDKMLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNAD 458
V S N D +K +++ + S+ LK D + ++Q + D
Sbjct: 1279 NVSLDSHDENSDQEKMLESISPRKRKKSLSSKLKITESDWA---LTDVERQSRSAG-GGD 1334
Query: 459 HNSLSVSLSTRVEETASGSADFSLRK 484
S S S + + SG A S ++
Sbjct: 1335 SKLKSASGSMKKRKNVSGLAKCSTKE 1360
Score = 43 (20.2 bits), Expect = 4.0e-42, Sum P(3) = 4.0e-42
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 483 RKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKPLQLSVTK 536
R K S I+ + EE S+ G + E E +KE+ LQ + T+
Sbjct: 1496 RNKKRRSSALPIETEYSGEAGEEKSESEGKSLKEGEDDEEVVNKEEDLQEAKTE 1549
Score = 42 (19.8 bits), Expect = 3.7e-41, Sum P(4) = 3.7e-41
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 582 KTEIKRKHTSGKEEKKMISKARAKSSDRDGSHSKETP 618
KT K + + G +KK S ++ K+ D G E P
Sbjct: 1425 KTAKKSRTSKGNSKKKRSSGSKPKNPD--GVQRDEDP 1459
Score = 41 (19.5 bits), Expect = 7.0e-64, Sum P(4) = 7.0e-64
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 390 VPGRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLAD 425
V G RK V S+ +D ++L++ K L D
Sbjct: 699 VEGNRKQAKYAVHALASITKDDGLKSLSVLYKRLVD 734
Score = 40 (19.1 bits), Expect = 7.0e-64, Sum P(4) = 7.0e-64
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 523 SADKEKPLQLSVTKKRRRSL 542
++D+EK L+ +KR++SL
Sbjct: 1288 NSDQEKMLESISPRKRKKSL 1307
Score = 39 (18.8 bits), Expect = 7.5e-41, Sum P(4) = 7.5e-41
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 571 NIDENYSEDTPKTEIKRKHTSGKEE-KKMISKARAKSSDRDGSHSKE 616
N+ + + +DTPK+ + +H + KK S A ++ G +E
Sbjct: 1473 NLKQLHPKDTPKS-LSLEHEKVESRNKKRRSSALPIETEYSGEAGEE 1518
Score = 38 (18.4 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 745 LYADGDEEILNLKKERWELIKGGS 768
L+ +EE+++ K+ E++K G+
Sbjct: 645 LFDGAEEELISFLKDDDEMMKEGT 668
Score = 37 (18.1 bits), Expect = 7.0e-41, Sum P(3) = 7.0e-41
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 888 KGERHNARDGESAVDNPVER 907
KG + N D S V P R
Sbjct: 1224 KGNKRNVGDATSVVSVPKRR 1243
>TAIR|locus:2025712 [details] [associations]
symbol:AT1G80810 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016024 EMBL:CP002684
SUPFAM:SSF48371 EMBL:AC011713 IPI:IPI00846911 RefSeq:NP_001077860.1
UniGene:At.33874 ProteinModelPortal:A8MRD9 PaxDb:A8MRD9
PRIDE:A8MRD9 EnsemblPlants:AT1G80810.2 GeneID:844420
KEGG:ath:AT1G80810 TAIR:At1g80810 eggNOG:NOG241686
HOGENOM:HOG000015164 InParanoid:A8MRD9 OMA:PLDEYAP PhylomeDB:A8MRD9
ProtClustDB:CLSN2679925 ArrayExpress:A8MRD9 Genevestigator:A8MRD9
Uniprot:A8MRD9
Length = 774
Score = 622 (224.0 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 161/430 (37%), Positives = 241/430 (56%)
Query: 53 MRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEITRITAPDSPYDDELMKEFFQLAVS 112
M+ AL+P+ L++ DLL D DVR+SV SC++EI RITAP++PY D+LMKE F+L +
Sbjct: 1 MQSALIPSRNALVSVDLLSHPDSDVRVSVVSCLTEIVRITAPETPYSDDLMKEIFRLTIE 60
Query: 113 AFENLSHASGRYYMKALSILDTVAKVRSCLLMLDLECDKLVVEMFQHFLKVIRSNHPHFV 172
AFE L+ AS R Y KA +LD VAKV+SCL+MLDLEC L+++MF++F K IRS+HP V
Sbjct: 61 AFEKLADASSRSYKKAEFVLDNVAKVKSCLVMLDLECYDLILQMFRNFFKFIRSDHPQLV 120
Query: 173 FAAMETIMTLVIDESEDVSWDLLRILLASVRKENQDVSPTSWKLGEKVFTKCAAKLKTNL 232
F++ME IM +IDE+E VS DLL LLA+V+KENQ+VSP SW L EKV ++CA KLK +
Sbjct: 121 FSSMELIMIAIIDETEQVSTDLLDSLLATVKKENQNVSPMSWSLAEKVLSRCARKLKPYI 180
Query: 233 KEAVQSRGIALDDYAEIVACICGSDDENPQHGHLIGSENQLATKEPDPPCLGEVVHD-VD 291
EA++SRG +LD Y+ +V+ IC S P+ H + + TKE + ++ H +
Sbjct: 181 IEALKSRGTSLDMYSPVVSSICQSVFNTPKV-H-----SPVNTKEHEEKL--DLGHSRKE 232
Query: 292 GISKSVTS----NGTAASRNEDSVVKDKLSNVLERCSQVERSQSIDAKCSAGPDTS-DSL 346
+SKS + + T ++ V S++L++ + RS+S DA+ + +SL
Sbjct: 233 NLSKSSSKRPARHETRGINEKEKVRNGNKSSLLKQSLKQVRSESTDAEITGKRGRKPNSL 292
Query: 347 RNVKSETEPESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRK---SDDKGVDC 403
N + + + KR S + +SS + KVP ++ ++
Sbjct: 293 MNPE-DYDISWLSGKRDPLKTSSNKKIQKKGSGGVSS---LGKVPAKKTPLPKENSPATS 348
Query: 404 SPSLNQDSKKEALNLTDK-----MLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNAD 458
S SL K+ + + + L+ P L S D ++ +K G++ Q
Sbjct: 349 SRSLTGSLKRSRVKMDESDYDSDSLSSPRLKKLASCFRDEEPNQED-DRKIGNSSKQTRS 407
Query: 459 HNSLSVSLST 468
N L S T
Sbjct: 408 KNGLEKSQKT 417
Score = 298 (110.0 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 116/517 (22%), Positives = 214/517 (41%)
Query: 437 DGSHHRRGRTKKQGSTVNQNADHNSLSVSLSTRVEE-TASGSADFSLRKKPEDRSDTEIK 495
D H R+ K S + A H + ++ +V S SL++ + +D EI
Sbjct: 225 DLGHSRKENLSKSSS--KRPARHETRGINEKEKVRNGNKSSLLKQSLKQVRSESTDAEIT 282
Query: 496 HRKRSKTNEEISQPPGYGVS----EKEAVVPSADK--EKPLQLSVTKKRR-RSLVVAISA 548
++ K N + P Y +S +++ + S++K +K V+ + + +
Sbjct: 283 GKRGRKPNS-LMNPEDYDISWLSGKRDPLKTSSNKKIQKKGSGGVSSLGKVPAKKTPLPK 341
Query: 549 QNISEAXXXXXXXXXXXXXXXPNIDENYSEDTPKTEIKRKHTS-------GKEEKKMISK 601
+N S A + +Y D+ + +K S +E+ + I
Sbjct: 342 EN-SPATSSRSLTGSLKRSRVKMDESDYDSDSLSSPRLKKLASCFRDEEPNQEDDRKIGN 400
Query: 602 ARAKSSDRDGSHSKETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLEETPTTEIXXXXX 661
+ ++ ++G + +LE P +
Sbjct: 401 SSKQTRSKNGLEKSQKTAKKKPVVEAKIVNSSGKRLSARSVAKRRNLERAP---LDTLVP 457
Query: 662 XXXXXXXXISKAGAKSLDGNCSAETPKTGVKRKLTAGKEMDSEAPALNEQLVGSRIKVWW 721
+S+ A+ L ETPK+ R+ T KE+ E LVG R+ +WW
Sbjct: 458 QSSKRKKMVSQVAARQLANESEEETPKSHPTRRRTVRKEVSD---GFGEDLVGKRVNIWW 514
Query: 722 PMDETFYKGVVDNYDPIKKKHRILYADGDEEILNLKKERWELIKGGSSAEEQETDVLKPD 781
P+D+TFY+GV+D+Y KK HR++Y+DGD E LNL +ERWEL++ +SA+EQ+ ++ P+
Sbjct: 515 PLDKTFYEGVIDSYCTRKKMHRVIYSDGDSEELNLTEERWELLEDDTSADEQDKEIDLPE 574
Query: 782 GS--SDILPKGKEEIEFELVNEVK--ASALKRWISRSTPASASKPKAKQSGGGSPAGATI 837
SDI+ + K + + V+ +S+ R SR+ + + + G +
Sbjct: 575 SIPLSDIMQRQKVKKSKNVAVSVEPTSSSGVRSSSRTLMKKDCGKRLNKQVEKTREGKNL 634
Query: 838 N--KPINADESK-ADLPEKESNPKGDDQNSPAKLI--LKDRKLIFTLNKQQQAVFKGERH 892
K +NA+ + A+ E + DD++ + D+K + +K +A K E
Sbjct: 635 RSLKELNAETDRTAEEQEVSLEAESDDRSEEQEYEDDCSDKKEQ-SQDKGVEAETKEEEK 693
Query: 893 NARDGESAVDNPVERSKEAVKGSSSNDFGTIVMDDEK 929
+ E + S+E K ++D + DDE+
Sbjct: 694 QYPNSEGESEGEDSESEEEPKWRETDD----MEDDEE 726
Score = 40 (19.1 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 757 KKERWELIKGGSSAEEQETDVLKPDGSSDILPKGKEEIEFELVNEVKAS 805
++E E+ AEE++ +V + S+++ KEE E E E + S
Sbjct: 726 EEEEEEIDHMEDEAEEEKEEVDDKEASANMSEIEKEEEEEEEDEEKRKS 774
>TAIR|locus:2183750 [details] [associations]
symbol:AT5G10950 "AT5G10950" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=RCA] GO:GO:0005829
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AL365234 EMBL:AY063955
EMBL:AY096725 IPI:IPI00525626 PIR:T50804 RefSeq:NP_196656.1
UniGene:At.27129 ProteinModelPortal:Q9LEU5 PaxDb:Q9LEU5
PRIDE:Q9LEU5 EnsemblPlants:AT5G10950.1 GeneID:830962
KEGG:ath:AT5G10950 TAIR:At5g10950 eggNOG:NOG327778
HOGENOM:HOG000152996 InParanoid:Q9LEU5 OMA:KKERWEL
ProtClustDB:CLSN2916340 ArrayExpress:Q9LEU5 Genevestigator:Q9LEU5
Uniprot:Q9LEU5
Length = 395
Score = 277 (102.6 bits), Expect = 9.3e-22, P = 9.3e-22
Identities = 77/231 (33%), Positives = 114/231 (49%)
Query: 696 TAGKEMDSEAPALNEQLVGSRIKVWWPMDETFYKGVVDNYDPIKKKHRILYADGDEEILN 755
++GK+ S+A E LVGSRI+VWWPMD FYKGVVD+Y KKKHR+ Y DGD+E L+
Sbjct: 21 SSGKDKVSDARKYGEALVGSRIRVWWPMDSKFYKGVVDSYVSSKKKHRVFYEDGDKETLD 80
Query: 756 LKKERWELIKGGSSAEEQETDVLKPDGSSDIL------PKGKEEIEFELVNEVKASALKR 809
LKKERWELI+ + E + L+ + + + PKGK + + + K+
Sbjct: 81 LKKERWELIEEDDAESESDEISLQEESAGESSEGTPEPPKGKGKASLKGRTDEAMPKKKQ 140
Query: 810 WISRSTPASASKPKAKQSGGGSPAGATINKPINADESKADLPEKESNPKGD-DQNSPAKL 868
I S+ + A + + K S + + + A + KG+ DQ +K
Sbjct: 141 KIDSSSKSKAKEVEKKASKPETEKNGKMGDIGGKIVAAASRMSERFRSKGNVDQKETSKA 200
Query: 869 ILKDRKLIFTLNKQQQAVFKGERHNARDGESAVDNPVERSKEAV-KGSSSN 918
K K+ L K++ + E A D +D E +K V K +SN
Sbjct: 201 SKKP-KMSSKLTKRKHTDDQDEDEEAGDD---IDTSSEEAKPKVLKSCNSN 247
>UNIPROTKB|E2R7R4 [details] [associations]
symbol:PDS5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008156 "negative regulation of DNA
replication" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] InterPro:IPR016024 GO:GO:0005886
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0000785 GO:GO:0008156 CTD:23244 KO:K11267 OMA:TKDAQSP
GeneTree:ENSGT00390000012488 EMBL:AAEX03002532 RefSeq:XP_851177.1
Ensembl:ENSCAFT00000025282 GeneID:479103 KEGG:cfa:479103
NextBio:20854336 Uniprot:E2R7R4
Length = 1337
Score = 196 (74.1 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 53/197 (26%), Positives = 101/197 (51%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
DE+I L V +++Q S + LP L + LR + DVRL V C+++I
Sbjct: 39 DEMIKRLKMVVKTFMDMDQ-DSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADI 97
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 98 FRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFEL 157
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E C+++ +++F+ VI ++H V M +M+ +I E + V+ +LL +L ++ +
Sbjct: 158 EDCNEIFIQLFRTLFSVINNSHNKKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAH 217
Query: 207 QDVSPTSWKLGEKVFTK 223
++++ S+ L KV K
Sbjct: 218 KNLNKQSFDLA-KVLLK 233
Score = 69 (29.3 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 32/132 (24%), Positives = 54/132 (40%)
Query: 337 SAGPDTSDSLRNVKSETEPESAPRKRGRKPNSLM-----NPEEGYDHSWISSGRKIAKVP 391
S G +T ++ NV SE P + R R + ++ N E ++ + I V
Sbjct: 1159 STGAETGSNI-NVNSELNPSTGNRSREQSSEAVETGVSENEENPVRIISVTPVKNIDPVK 1217
Query: 392 GRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLADPTSASL-KSGLPDGSHHRRGRTKKQG 450
+ + D+ + S ++ K+ + + T + +SG P S RRGR K
Sbjct: 1218 NKEINSDQTTQGNISSDRGKKRSVAAAGTENIQQKTDEKVDESGPPAPSKPRRGRRPKSE 1277
Query: 451 STVN--QNADHN 460
S N +N D N
Sbjct: 1278 SQGNATKNDDIN 1289
Score = 50 (22.7 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 12/75 (16%), Positives = 33/75 (44%)
Query: 798 LVNEVKASALKRWISRSTPASASKPKAKQSGGGSPAGATINKPIN---ADESKADLPEKE 854
L + K + + +++ A+ KP + +G + + +N +N + S+ E
Sbjct: 1131 LTGKPKPAGVLGAVNKPLSATGRKPYVRSTGAETGSNINVNSELNPSTGNRSREQSSEAV 1190
Query: 855 SNPKGDDQNSPAKLI 869
+++ +P ++I
Sbjct: 1191 ETGVSENEENPVRII 1205
Score = 49 (22.3 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 814 STPASASKPKAKQSGGGSPAGATINKPINADESKADLPEKESNPKG 859
S P +PK+ +S G + INKP+ +A + ++ +P G
Sbjct: 1266 SKPRRGRRPKS-ESQGNATKNDDINKPLGKGRKRAAVSQE--SPGG 1308
Score = 47 (21.6 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 28/124 (22%), Positives = 49/124 (39%)
Query: 732 VDNYDPIKKKHRILYADGDEEILNLKKERWELIKGGSSAEEQETDVLKPDGSSDILP--- 788
V N DP+K K I + + ++ + G+ +Q+TD K D S P
Sbjct: 1210 VKNIDPVKNKEINSDQTTQGNISSDRGKKRSVAAAGTENIQQKTDE-KVDESGPPAPSKP 1268
Query: 789 -KGKEEIEFELVNEVKASALKRWISRSTPASASKPKAKQSGGGSPAGATINKPINADESK 847
+G+ N K + + + + +A +++S GG AG P D +K
Sbjct: 1269 RRGRRPKSESQGNATKNDDINKPLGKGRKRAAV---SQESPGGLEAG-NAKAPKLQDVAK 1324
Query: 848 ADLP 851
+P
Sbjct: 1325 KAVP 1328
>UNIPROTKB|Q29RF7 [details] [associations]
symbol:PDS5A "Sister chromatid cohesion protein PDS5
homolog A" species:9606 "Homo sapiens" [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0008156 "negative regulation of
DNA replication" evidence=IMP] [GO:0000785 "chromatin"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR016024 GO:GO:0005886 GO:GO:0005634
Reactome:REACT_115566 SUPFAM:SSF48371 Reactome:REACT_21300
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301
GO:GO:0007067 GO:GO:0000785 GO:GO:0008156 HOVERGEN:HBG108241
CTD:23244 KO:K11267 eggNOG:NOG268017 HOGENOM:HOG000230672
OrthoDB:EOG46T30N EMBL:AY550968 EMBL:AK098331 EMBL:BC041361
EMBL:BC114218 EMBL:BC126225 EMBL:AF294791 EMBL:CR749425
EMBL:AB014548 IPI:IPI00854642 IPI:IPI00854687 RefSeq:NP_001093869.1
RefSeq:NP_001093870.1 UniGene:Hs.331431 ProteinModelPortal:Q29RF7
IntAct:Q29RF7 STRING:Q29RF7 PhosphoSite:Q29RF7 DMDM:121947590
PaxDb:Q29RF7 PRIDE:Q29RF7 DNASU:23244 Ensembl:ENST00000303538
Ensembl:ENST00000503396 GeneID:23244 KEGG:hsa:23244 UCSC:uc003guv.4
UCSC:uc003guw.4 GeneCards:GC04M039824 HGNC:HGNC:29088 HPA:HPA036662
MIM:613200 neXtProt:NX_Q29RF7 PharmGKB:PA162399027
InParanoid:Q29RF7 OMA:TKDAQSP ChiTaRS:PDS5A GenomeRNAi:23244
NextBio:44916 ArrayExpress:Q29RF7 Bgee:Q29RF7 CleanEx:HS_PDS5A
Genevestigator:Q29RF7 Uniprot:Q29RF7
Length = 1337
Score = 196 (74.1 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 53/197 (26%), Positives = 101/197 (51%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
DE+I L V +++Q S + LP L + LR + DVRL V C+++I
Sbjct: 39 DEMIKRLKMVVKTFMDMDQ-DSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADI 97
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 98 FRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFEL 157
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E C+++ +++F+ VI ++H V M +M+ +I E + V+ +LL +L ++ +
Sbjct: 158 EDCNEIFIQLFRTLFSVINNSHNKKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAH 217
Query: 207 QDVSPTSWKLGEKVFTK 223
++++ S+ L KV K
Sbjct: 218 KNLNKQSFDLA-KVLLK 233
Score = 67 (28.6 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 32/132 (24%), Positives = 53/132 (40%)
Query: 337 SAGPDTSDSLRNVKSETEPESAPRKRGRKPNSLM-----NPEEGYDHSWISSGRKIAKVP 391
S G +T ++ NV SE P + R R + + N E ++ + I V
Sbjct: 1159 STGTETGSNI-NVNSELNPSTGNRSREQSSEAAETGVSENEENPVRIISVTPVKNIDPVK 1217
Query: 392 GRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLADPTSASL-KSGLPDGSHHRRGRTKKQG 450
+ + D+ + S ++ K+ + + T + +SG P S RRGR K
Sbjct: 1218 NKEINSDQATQGNISSDRGKKRTVTAAGAENIQQKTDEKVDESGPPAPSKPRRGRRPKSE 1277
Query: 451 STVN--QNADHN 460
S N +N D N
Sbjct: 1278 SQGNATKNDDLN 1289
Score = 54 (24.1 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 814 STPASASKPKAKQSGGGSPAGATINKPINADESKADLPEKESNPKG 859
S P +PK+ +S G + +NKPIN +A + ++ +P G
Sbjct: 1266 SKPRRGRRPKS-ESQGNATKNDDLNKPINKGRKRAAVGQE--SPGG 1308
Score = 49 (22.3 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 12/75 (16%), Positives = 33/75 (44%)
Query: 798 LVNEVKASALKRWISRSTPASASKPKAKQSGGGSPAGATINKPIN---ADESKADLPEKE 854
L + K + + +++ A+ KP + +G + + +N +N + S+ E
Sbjct: 1131 LTGKPKPAGVLGAVNKPLSATGRKPYVRSTGTETGSNINVNSELNPSTGNRSREQSSEAA 1190
Query: 855 SNPKGDDQNSPAKLI 869
+++ +P ++I
Sbjct: 1191 ETGVSENEENPVRII 1205
Score = 43 (20.2 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 22/125 (17%), Positives = 49/125 (39%)
Query: 483 RKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKPLQLSVTKKRRRSL 542
R++ + ++T + + + IS P + + ++D+ +S + ++R+
Sbjct: 1183 REQSSEAAETGVSENEENPVRI-ISVTPVKNIDPVKNKEINSDQATQGNISSDRGKKRT- 1240
Query: 543 VVAISAQNISEAXXXXXXXXXXXXXXXPNIDENYSEDTPKTEIKRKHTSGKEEKKMISKA 602
V A A+NI + P PK+E + T + K I+K
Sbjct: 1241 VTAAGAENIQQKTDEKVDESGPPAPSKPRRGRR-----PKSESQGNATKNDDLNKPINKG 1295
Query: 603 RAKSS 607
R +++
Sbjct: 1296 RKRAA 1300
>UNIPROTKB|F1NIQ3 [details] [associations]
symbol:PDS5A "Sister chromatid cohesion protein PDS5
homolog A" species:9031 "Gallus gallus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008156 "negative regulation of
DNA replication" evidence=IEA] InterPro:IPR016024 GO:GO:0005886
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0000785 GO:GO:0008156 IPI:IPI00599274 OMA:TKDAQSP
GeneTree:ENSGT00390000012488 EMBL:AADN02031215 EMBL:AADN02031216
EMBL:AADN02031217 Ensembl:ENSGALT00000023102 Uniprot:F1NIQ3
Length = 1330
Score = 196 (74.1 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 52/197 (26%), Positives = 101/197 (51%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
DEV+ L V +++Q S + LP L + LR + DVRL V C+++I
Sbjct: 33 DEVVKRLKMVVKTFMDMDQ-DSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADI 91
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 92 FRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFEL 151
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E C+++ +++F+ VI ++H V M +M+ +I E + V+ +LL +L ++ +
Sbjct: 152 EDCNEIFIQLFRTLFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAH 211
Query: 207 QDVSPTSWKLGEKVFTK 223
++++ ++ L KV K
Sbjct: 212 KNLNKQAFDLA-KVLLK 227
Score = 62 (26.9 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 71/291 (24%), Positives = 115/291 (39%)
Query: 258 DENPQHGHLIG-SENQLATKE---PDPPCLGEVVHDVDGISKSVTSNGTA---ASRNEDS 310
+EN H + +EN T++ PD P E ++ V ++ V ++ +A A +D
Sbjct: 1036 NENNSHAFMKKMAENIKLTRDAQSPDEPKANEKLYTVCDVALCVINSKSALCNADSPKDP 1095
Query: 311 VVKDKLSNVLERCSQVER---SQSIDAKCSAG-PDTSDSLRNVKSETEPESAPRKRGRKP 366
V+ K E+ +R S+ G P + L V +P SA GR+P
Sbjct: 1096 VLPTKFFTQPEKDFSNDRNYISEETRVLLLTGKPKPTGVLGTVN---KPLSAT---GRRP 1149
Query: 367 NSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCSP---SLNQDSKKEALNLTDKML 423
E S IS +++ G R S ++ D S S N ++ +++T
Sbjct: 1150 YIRTTGSE--TGSNISVNSELSSSAGNR-SREQSSDISETGVSENDENPVRIISVTPAKT 1206
Query: 424 ADPTSASLKSG-LPDGSHHRRG--RTKKQGSTVN--QNADHNSLSVSLSTRVEETASGSA 478
+ + S G+ RG RT T N Q A+ N+ + + +T G
Sbjct: 1207 EPVKNKEINSDQATQGNSTERGKKRTATASGTENIHQKAEENNADETGPSLAAKTRRGRP 1266
Query: 479 DFSLRKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKP 529
KPE + T +K NEE ++PP G K A +A +E P
Sbjct: 1267 P-----KPEPQGTT-------AK-NEETNKPPVRG--RKRA---AASQESP 1299
Score = 52 (23.4 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 38/222 (17%), Positives = 82/222 (36%)
Query: 302 TAASRNEDSVVKDKLSNV-LERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETEPESAPR 360
T N + +K N+ L R +Q + K D + + N KS +P+
Sbjct: 1034 TKNENNSHAFMKKMAENIKLTRDAQSPDEPKANEKLYTVCDVALCVINSKSALCNADSPK 1093
Query: 361 KRGRKPNSLMNPEEGY--DHSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQDSKKEALNL 418
PE+ + D ++IS ++ + G+ K + L+ ++ +
Sbjct: 1094 DPVLPTKFFTQPEKDFSNDRNYISEETRVLLLTGKPKPTGVLGTVNKPLSATGRRPYIRT 1153
Query: 419 TDKMLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVSLS-TRVE------ 471
T S + + G+ R + + V++N ++ +S++ + E
Sbjct: 1154 TGSETGSNISVNSELSSSAGNRSREQSSDISETGVSENDENPVRIISVTPAKTEPVKNKE 1213
Query: 472 ----ETASGSADFSLRKKPEDRSDTEIKHRKRSKTNEEISQP 509
+ G++ +K+ S TE H+K + N + + P
Sbjct: 1214 INSDQATQGNSTERGKKRTATASGTENIHQKAEENNADETGP 1255
>UNIPROTKB|Q5F3V3 [details] [associations]
symbol:PDS5A "Sister chromatid cohesion protein PDS5
homolog A" species:9031 "Gallus gallus" [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008156 "negative regulation of DNA
replication" evidence=ISS] InterPro:IPR016024 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0007067 GO:GO:0008156
HOVERGEN:HBG108241 CTD:23244 KO:K11267 EMBL:AJ851547
IPI:IPI00599274 RefSeq:NP_001012598.1 UniGene:Gga.17541
ProteinModelPortal:Q5F3V3 STRING:Q5F3V3 GeneID:422787
KEGG:gga:422787 eggNOG:NOG268017 HOGENOM:HOG000230672
InParanoid:Q5F3V3 OrthoDB:EOG46T30N NextBio:20825370 Uniprot:Q5F3V3
Length = 1330
Score = 196 (74.1 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 52/197 (26%), Positives = 101/197 (51%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
DEV+ L V +++Q S + LP L + LR + DVRL V C+++I
Sbjct: 33 DEVVKRLKMVVKTFMDMDQ-DSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADI 91
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 92 FRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFEL 151
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E C+++ +++F+ VI ++H V M +M+ +I E + V+ +LL +L ++ +
Sbjct: 152 EDCNEIFIQLFRTLFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAH 211
Query: 207 QDVSPTSWKLGEKVFTK 223
++++ ++ L KV K
Sbjct: 212 KNLNKQAFDLA-KVLLK 227
Score = 62 (26.9 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 71/291 (24%), Positives = 115/291 (39%)
Query: 258 DENPQHGHLIG-SENQLATKE---PDPPCLGEVVHDVDGISKSVTSNGTA---ASRNEDS 310
+EN H + +EN T++ PD P E ++ V ++ V ++ +A A +D
Sbjct: 1036 NENNSHAFMKKMAENIKLTRDAQSPDEPKANEKLYTVCDVALCVINSKSALCNADSPKDP 1095
Query: 311 VVKDKLSNVLERCSQVER---SQSIDAKCSAG-PDTSDSLRNVKSETEPESAPRKRGRKP 366
V+ K E+ +R S+ G P + L V +P SA GR+P
Sbjct: 1096 VLPTKFFTQPEKDFSNDRNYISEETRVLLLTGKPKPTGVLDTVN---KPLSAT---GRRP 1149
Query: 367 NSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCSP---SLNQDSKKEALNLTDKML 423
E S IS +++ G R S ++ D S S N ++ +++T
Sbjct: 1150 YIRTTGSE--TGSNISVNSELSSSAGNR-SREQSSDISETGVSENDENPVRIISVTPAKT 1206
Query: 424 ADPTSASLKSG-LPDGSHHRRG--RTKKQGSTVN--QNADHNSLSVSLSTRVEETASGSA 478
+ + S G+ RG RT T N Q A+ N+ + + +T G
Sbjct: 1207 EPVKNKEINSDQATQGNSTERGKKRTATASGTENIHQKAEENNADETGPSLAAKTRRGRP 1266
Query: 479 DFSLRKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKP 529
KPE + T +K NEE ++PP G K A +A +E P
Sbjct: 1267 P-----KPEPQGTT-------AK-NEETNKPPVRG--RKRA---AASQESP 1299
Score = 52 (23.4 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 38/222 (17%), Positives = 82/222 (36%)
Query: 302 TAASRNEDSVVKDKLSNV-LERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETEPESAPR 360
T N + +K N+ L R +Q + K D + + N KS +P+
Sbjct: 1034 TKNENNSHAFMKKMAENIKLTRDAQSPDEPKANEKLYTVCDVALCVINSKSALCNADSPK 1093
Query: 361 KRGRKPNSLMNPEEGY--DHSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQDSKKEALNL 418
PE+ + D ++IS ++ + G+ K + L+ ++ +
Sbjct: 1094 DPVLPTKFFTQPEKDFSNDRNYISEETRVLLLTGKPKPTGVLDTVNKPLSATGRRPYIRT 1153
Query: 419 TDKMLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVSLS-TRVE------ 471
T S + + G+ R + + V++N ++ +S++ + E
Sbjct: 1154 TGSETGSNISVNSELSSSAGNRSREQSSDISETGVSENDENPVRIISVTPAKTEPVKNKE 1213
Query: 472 ----ETASGSADFSLRKKPEDRSDTEIKHRKRSKTNEEISQP 509
+ G++ +K+ S TE H+K + N + + P
Sbjct: 1214 INSDQATQGNSTERGKKRTATASGTENIHQKAEENNADETGP 1255
>RGD|1307094 [details] [associations]
symbol:Pds5a "PDS5, regulator of cohesion maintenance, homolog A
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000785
"chromatin" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0008156 "negative
regulation of DNA replication" evidence=ISO;ISS] [GO:0051301 "cell
division" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR016024 RGD:1307094 GO:GO:0005886 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0007067 GO:GO:0000785
GO:GO:0008156 HOVERGEN:HBG108241 CTD:23244 KO:K11267
eggNOG:NOG268017 HOGENOM:HOG000230672 OrthoDB:EOG46T30N
EMBL:EF460313 IPI:IPI00364488 RefSeq:NP_001077093.1
UniGene:Rn.24482 ProteinModelPortal:A4L9P7 STRING:A4L9P7
PhosphoSite:A4L9P7 PRIDE:A4L9P7 Ensembl:ENSRNOT00000003437
GeneID:305343 KEGG:rno:305343 UCSC:RGD:1307094
GeneTree:ENSGT00390000012488 InParanoid:A4L9P7 NextBio:654401
Genevestigator:A4L9P7 Uniprot:A4L9P7
Length = 1333
Score = 196 (74.1 bits), Expect = 3.1e-12, Sum P(3) = 3.1e-12
Identities = 53/197 (26%), Positives = 101/197 (51%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
DE+I L V +++Q S + LP L + LR + DVRL V C+++I
Sbjct: 38 DEMIKRLKMVVKTFMDMDQ-DSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADI 96
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 97 FRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFEL 156
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E C+++ +++F+ VI ++H V M +M+ +I E + V+ +LL +L ++ +
Sbjct: 157 EDCNEIFIQLFRTLFSVINNSHNKKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAH 216
Query: 207 QDVSPTSWKLGEKVFTK 223
++++ S+ L KV K
Sbjct: 217 KNLNKQSFDLA-KVLLK 232
Score = 69 (29.3 bits), Expect = 3.1e-12, Sum P(3) = 3.1e-12
Identities = 35/149 (23%), Positives = 62/149 (41%)
Query: 337 SAGPDTSDSLRNVKSETEPESAPRKRGRKPNSLM-----NPEEGYDHSWISSGRKIAKVP 391
SAG +T ++ N SE P + R R + + N E ++ + I V
Sbjct: 1158 SAGTETGSNI-NASSELSPSAGNRSREQSSEASETGVSENEENPVRIISVTPVKSIDTVK 1216
Query: 392 GRRKSDDKGVDCSPSLNQDSKKEALNL-TDKMLADPTSASLKSGLPDGSHHRRGRTKKQG 450
+ + D+ + S ++ K+ + + P + +SG P S RRGR K
Sbjct: 1217 NKEINSDQSTQGNISSDRGKKRIVTAAGAENIQQKPDEKADESGPPAPSKPRRGRRPKSE 1276
Query: 451 STVNQNADHNSLSVSLSTRVEETASGSAD 479
S N + + LS +S + + A+GS +
Sbjct: 1277 SQGNATKN-DDLSKPVS-KGRKRAAGSQE 1303
Score = 54 (24.1 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 36/191 (18%), Positives = 72/191 (37%)
Query: 420 DKM-LADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVSLSTRVEETA--SG 476
DK +++ T L +G P + G K S + S + + ++ S
Sbjct: 1117 DKSYISEETRVLLLTGKPKPTGVL-GTVNKPLSATGRKPYVRSAGTETGSNINASSELSP 1175
Query: 477 SADFSLRKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKPLQLSVTK 536
SA R++ + S+T + + + IS P + + ++D+ +S +
Sbjct: 1176 SAGNRSREQSSEASETGVSENEENPVRI-ISVTPVKSIDTVKNKEINSDQSTQGNISSDR 1234
Query: 537 KRRRSLVVAISAQNISEAXXXXXXXXXXXXXXXPNIDENYSEDTPKTEIKRKHTSGKEEK 596
++R +V A A+NI + P PK+E + T +
Sbjct: 1235 GKKR-IVTAAGAENIQQKPDEKADESGPPAPSKPRRGRR-----PKSESQGNATKNDDLS 1288
Query: 597 KMISKARAKSS 607
K +SK R +++
Sbjct: 1289 KPVSKGRKRAA 1299
Score = 47 (21.6 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 25/119 (21%), Positives = 55/119 (46%)
Query: 799 VNE-VKASALKRWISRSTPASASKPKAKQSGGGSPAGATINKPINADESKADLPEKESNP 857
VN+ + A+ K ++ + + S A S SP+ ++ +++ S+ + E E NP
Sbjct: 1143 VNKPLSATGRKPYVRSAGTETGSNINA--SSELSPSAGNRSREQSSEASETGVSENEENP 1200
Query: 858 KGDDQNSPAKLI--LKDRKLIFTLNKQQQ-AVFKGERH--NARDGESAVDNPVERSKEA 911
+P K I +K++++ + Q + +G++ A E+ P E++ E+
Sbjct: 1201 VRIISVTPVKSIDTVKNKEINSDQSTQGNISSDRGKKRIVTAAGAENIQQKPDEKADES 1259
Score = 40 (19.1 bits), Expect = 3.1e-12, Sum P(3) = 3.1e-12
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 673 AGAK-SLD-GNCSAETPKTGVKRKLTAGKEMD 702
AG++ SL+ GN A + G K+ + A +++D
Sbjct: 1299 AGSQESLEAGNAKAPKLQDGAKKAVPAERQID 1330
>ZFIN|ZDB-GENE-040426-1612 [details] [associations]
symbol:pds5a "PDS5, regulator of cohesion
maintenance, homolog A (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0008156 "negative regulation of DNA replication" evidence=ISS]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR016024
ZFIN:ZDB-GENE-040426-1612 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GeneTree:ENSGT00390000012488 EMBL:CR759875
IPI:IPI00829298 Ensembl:ENSDART00000126785 ArrayExpress:F1QDE7
Bgee:F1QDE7 Uniprot:F1QDE7
Length = 1321
Score = 193 (73.0 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 50/204 (24%), Positives = 102/204 (50%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
DEV+ L V +++Q S + L L + LR + DVRL V C+++I
Sbjct: 35 DEVVKRLKLVVKTYMDMDQ-DSEEEKQQYLALALHLASEFFLRNPNKDVRLLVACCLADI 93
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +KE F + L + + +L+ +A V+S + +L
Sbjct: 94 FRIYAPEAPYTSHDKLKEIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFEL 153
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E C+++ +++F+ VI ++H V M +M+ +I E + V+ +LL +L ++ +
Sbjct: 154 EDCNEIFIQLFKTLFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQELLDTILINLIPAH 213
Query: 207 QDVSPTSWKLGEKVFTKCAAKLKT 230
++++ ++ L + + ++T
Sbjct: 214 KNLNKQAYDLARTLLKRTVQTIET 237
Score = 62 (26.9 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 31/155 (20%), Positives = 59/155 (38%)
Query: 342 TSDSLRNVKSETEPESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGV 401
TS++ N + ++P S + R +S + E ++ I+ + K + S K
Sbjct: 1161 TSETGSNASTNSQPSSPATNKSRDVSSEVGARENEENPVITKAVSVKKEEAAQPSGRKRA 1220
Query: 402 DCSPSLNQDSKKEALNLTDKMLADPTSASLKSGLPD-GSHHRRGRTKKQGSTVNQNADHN 460
+P+ D + +++ + P + G P S + K+ G+T A
Sbjct: 1221 --APA--SDGTENSVSSNPSAGSQPPLNKPRRGRPPKNSAGAATQEKEAGATTGAGAGRG 1276
Query: 461 SLSVSLSTRVEETASGSADFSLRKKPEDRSDTEIK 495
+ S TAS D K P+ + + E K
Sbjct: 1277 RKRAAPSQDPSSTAS--TDALSDKTPKQQKEAEPK 1309
Score = 59 (25.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 35/128 (27%), Positives = 47/128 (36%)
Query: 294 SKSVTSNGTAASRNEDSVVKDKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVKSET 353
S+ V+S A E+ V+ +S E +Q + A S G + S S
Sbjct: 1182 SRDVSSEVGARENEENPVITKAVSVKKEEAAQPSGRKRA-APASDGTENSVSSNPSAGSQ 1240
Query: 354 EPESAPRKRGRKP-NSL----MNPEEGYDH-SWISSGRKIAKVPGRRKSDDKGVDCSPSL 407
P + PR RGR P NS E G + GRK A P + S D
Sbjct: 1241 PPLNKPR-RGRPPKNSAGAATQEKEAGATTGAGAGRGRKRA-APSQDPSSTASTDALSDK 1298
Query: 408 NQDSKKEA 415
+KEA
Sbjct: 1299 TPKQQKEA 1306
Score = 47 (21.6 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 15/62 (24%), Positives = 24/62 (38%)
Query: 466 LSTRVEETASGSADFSLRKKPEDRSDTEIKHRKRSKTNEEISQ-PPGYGVSEKEAVVPSA 524
+ T ET S ++ S P ++ ++ NEE V ++EA PS
Sbjct: 1157 IKTFTSETGSNASTNSQPSSPATNKSRDVSSEVGARENEENPVITKAVSVKKEEAAQPSG 1216
Query: 525 DK 526
K
Sbjct: 1217 RK 1218
Score = 44 (20.5 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 23/102 (22%), Positives = 45/102 (44%)
Query: 206 NQDVSPTSWKLGEKVFT-KCAAKLKTNLKEAVQSRGIALDDYAEIVACICGSDDENPQHG 264
N+ ++ T+ + K FT + + TN + + + + D +E+ A ++ENP
Sbjct: 1145 NKPLTVTARRPYIKTFTSETGSNASTNSQPSSPATNKSRDVSSEVGA---RENEENPVIT 1201
Query: 265 HLIGSENQLATKEPDPPCLGEVVHDVDGISKSVTSNGTAASR 306
+ + + A + P DG SV+SN +A S+
Sbjct: 1202 KAVSVKKEEAAQ---PSGRKRAAPASDGTENSVSSNPSAGSQ 1240
>SGD|S000004681 [details] [associations]
symbol:PDS5 "Protein involved in sister chromatid
condensation and cohesion" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0007129 "synapsis" evidence=IMP]
[GO:0051301 "cell division" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007126
"meiosis" evidence=IMP] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IMP] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=ISS] [GO:0000798 "nuclear cohesin complex" evidence=IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
InterPro:IPR016024 SGD:S000004681 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301 GO:GO:0005198
EMBL:Z48952 EMBL:BK006946 GO:GO:0006302 GO:GO:0000794 EMBL:Z49259
GO:GO:0007076 GO:GO:0007064 GO:GO:0007129 KO:K11267
eggNOG:NOG268017 GeneTree:ENSGT00390000012488 OrthoDB:EOG44XNR4
PIR:S54451 RefSeq:NP_013793.1 ProteinModelPortal:Q04264 SMR:Q04264
DIP:DIP-6799N IntAct:Q04264 MINT:MINT-650430 STRING:Q04264
PaxDb:Q04264 PeptideAtlas:Q04264 EnsemblFungi:YMR076C GeneID:855099
KEGG:sce:YMR076C CYGD:YMR076c HOGENOM:HOG000248675 OMA:KIWINFT
NextBio:978417 Genevestigator:Q04264 GermOnline:YMR076C
Uniprot:Q04264
Length = 1277
Score = 201 (75.8 bits), Expect = 8.1e-12, Sum P(3) = 8.1e-12
Identities = 67/251 (26%), Positives = 120/251 (47%)
Query: 20 LLLNPP--SPVDEVIN---LLDKVEHL---LANVEQAPSRSMRDALLPTMKGLITNDLLR 71
L N P S D++I+ LLD+++ L LA+++Q + L L++ LL+
Sbjct: 9 LKFNSPIISTSDQLISTNELLDRLKALHEELASLDQ--DNTDLTGLDKYRDALVSRKLLK 66
Query: 72 RSDMDVRLSVTSCISEITRITAPDSPYDDELMKEFFQLAVSAFENLSHASGRYYMKALSI 131
D+ +R C+S+I R+ APD+PY D + + F+L +S FE L Y+++ +
Sbjct: 67 HKDVGIRAFTACCLSDILRLYAPDAPYTDAQLTDIFKLVLSQFEQLGDQENGYHIQQTYL 126
Query: 132 LDTVAKVRSCLLMLDL-ECDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDV 190
+ + + RS +L+ DL + L++E+F F +S P +F + I+ VI E + V
Sbjct: 127 ITKLLEYRSIVLLADLPSSNNLLIELFHIFYDPNKS-FPARLFNVIGGILGEVISEFDSV 185
Query: 191 SWDLLRILLASVRKENQDVSPTSWKLGEKVFTKCAAKLKTNLKEAVQSR-GIALDDYAEI 249
++LR++ N + P G V + C ++ L + +R L Y
Sbjct: 186 PLEVLRLIFNKFLTYNPNEIPE----GLNVTSDCGYEVSLILCDTYSNRMSRHLTKYYSE 241
Query: 250 VACICGSDDEN 260
+ +DD N
Sbjct: 242 IIHEATNDDNN 252
Score = 50 (22.7 bits), Expect = 8.1e-12, Sum P(3) = 8.1e-12
Identities = 25/98 (25%), Positives = 44/98 (44%)
Query: 265 HLIGSENQLATKEPDPPCLGEVVHDVDGISKSVTSNGTAASRNEDSVVKDKLSNVLERCS 324
H + SEN+L KE +G+++ ++ T + T + S + D +V
Sbjct: 286 HELSSENELFRKEATK-LIGQILTSYSDLNFVSTHSDTFKAWI--SKIADISPDV----- 337
Query: 325 QVERSQSIDAKCSAGPDTSDSLRNVKSETEPESAPRKR 362
+VE ++SI + D S L ++T +S PR R
Sbjct: 338 RVEWTESIPQIIATREDISKELNQALAKTFIDSDPRVR 375
Score = 49 (22.3 bits), Expect = 8.1e-12, Sum P(3) = 8.1e-12
Identities = 8/36 (22%), Positives = 21/36 (58%)
Query: 582 KTEIKRKHTSGKEEKKMISKARAKSSDRDGSHSKET 617
K + ++ +++KK + AR+++ D +G +E+
Sbjct: 1196 KRLLAHENNESQKKKKKVHHARSQADDEEGDGDRES 1231
Score = 44 (20.5 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 392 GRRKSDDKGVDCSPSLNQDSKKEALNLTDKML 423
G R+SD SPS ++KK N+ K L
Sbjct: 1227 GDRESDSDDDSYSPSNKNETKKGHENIVMKKL 1258
Score = 39 (18.8 bits), Expect = 8.4e-11, Sum P(3) = 8.4e-11
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 863 NSPAKLILKDRKLIFTLNKQQQAVFKGERHNARDGESAVDNP 904
NS AK + R+++ ++K +FK + + +D+P
Sbjct: 659 NSDAKQLDLKRRILDDISKVNPTLFKDQIRTLKTIIKDLDDP 700
>UNIPROTKB|E1BKG4 [details] [associations]
symbol:E1BKG4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008156 "negative regulation of DNA replication"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] InterPro:IPR016024 GO:GO:0005886 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000785
GO:GO:0008156 OMA:TKDAQSP GeneTree:ENSGT00390000012488
EMBL:DAAA02017473 EMBL:DAAA02017474 EMBL:DAAA02017475
EMBL:DAAA02017476 EMBL:DAAA02017477 EMBL:DAAA02017478
EMBL:DAAA02017479 EMBL:DAAA02017480 IPI:IPI00715373
Ensembl:ENSBTAT00000023680 Uniprot:E1BKG4
Length = 1295
Score = 183 (69.5 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 50/191 (26%), Positives = 97/191 (50%)
Query: 35 LDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEITRITAP 94
L V +++Q S + LP L + LR + DVRL V C+++I RI AP
Sbjct: 1 LQMVVKTFMDMDQ-DSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAP 59
Query: 95 DSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDLE-CDKL 152
++PY + +K+ F + L + + +L+ +A V+S + +LE C+++
Sbjct: 60 EAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEI 119
Query: 153 VVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKENQDVSPT 212
+++F+ VI ++H V M +M+ +I E + V+ +LL +L ++ +++++
Sbjct: 120 FIQLFRTLFSVINNSHNKKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQ 179
Query: 213 SWKLGEKVFTK 223
S+ L KV K
Sbjct: 180 SFDLA-KVLLK 189
Score = 70 (29.7 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 43/180 (23%), Positives = 70/180 (38%)
Query: 337 SAGPDTSDSLRNVKSETEPESAPRKRGRKPNSLM-----NPEEGYDHSWISSGRKIAKVP 391
S G +T ++ NV SE P + R R + + N E ++ + I V
Sbjct: 1117 STGAETGSNI-NVNSELNPSTGNRPREQSSEAAETGVSENEENPVRIISVTPVKNIDPVK 1175
Query: 392 GRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLADPTSASL-KSGLPDGSHHRRGRTKKQG 450
+ + D+ + S ++ K+ + + T +SG P S RRGR K
Sbjct: 1176 NKEINSDQSAQGNISSDRGKKRTVTAAGAENIQQKTDEKADESGPPAPSKPRRGRRPKSE 1235
Query: 451 STVN--QNADHNS-LSVSLS-TRVEETASGSADFSLRKKPEDRSDTEIKHRKRSKTNEEI 506
S N +N D N LS V + + G + K P+ DT +K + T +I
Sbjct: 1236 SQGNATKNDDINKPLSKGRKRAAVSQESPGGLEAGNAKAPK-LQDTA---KKAAPTERQI 1291
Score = 53 (23.7 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 29/124 (23%), Positives = 49/124 (39%)
Query: 732 VDNYDPIKKKHRILYADGDEEILNLKKERWELIKGGSSAEEQETDVLKPDGSSDILP--- 788
V N DP+K K I + + ++ + G+ +Q+TD K D S P
Sbjct: 1168 VKNIDPVKNKEINSDQSAQGNISSDRGKKRTVTAAGAENIQQKTDE-KADESGPPAPSKP 1226
Query: 789 -KGKEEIEFELVNEVKASALKRWISRSTPASASKPKAKQSGGGSPAGATINKPINADESK 847
+G+ N K + + +S+ +A +++S GG AG P D +K
Sbjct: 1227 RRGRRPKSESQGNATKNDDINKPLSKGRKRAAV---SQESPGGLEAG-NAKAPKLQDTAK 1282
Query: 848 ADLP 851
P
Sbjct: 1283 KAAP 1286
Score = 50 (22.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 814 STPASASKPKAKQSGGGSPAGATINKPINADESKADLPEKESNPKG 859
S P +PK+ +S G + INKP++ +A + ++ +P G
Sbjct: 1224 SKPRRGRRPKS-ESQGNATKNDDINKPLSKGRKRAAVSQE--SPGG 1266
Score = 48 (22.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 13/77 (16%), Positives = 36/77 (46%)
Query: 798 LVNEVKASALKRWISRSTPASASKPKAKQSGGGSPAGATINKPINADESKADLPEKESNP 857
L + K + + +++ A+ KP + +G + + +N +N S + P ++S+
Sbjct: 1089 LTGKPKPAGVLGAVNKPLSATGRKPYVRSTGAETGSNINVNSELNP--STGNRPREQSSE 1146
Query: 858 KGD-----DQNSPAKLI 869
+ ++ +P ++I
Sbjct: 1147 AAETGVSENEENPVRII 1163
Score = 46 (21.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 22/125 (17%), Positives = 49/125 (39%)
Query: 483 RKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKPLQLSVTKKRRRSL 542
R++ + ++T + + + IS P + + ++D+ +S + ++R+
Sbjct: 1141 REQSSEAAETGVSENEENPVRI-ISVTPVKNIDPVKNKEINSDQSAQGNISSDRGKKRT- 1198
Query: 543 VVAISAQNISEAXXXXXXXXXXXXXXXPNIDENYSEDTPKTEIKRKHTSGKEEKKMISKA 602
V A A+NI + P PK+E + T + K +SK
Sbjct: 1199 VTAAGAENIQQKTDEKADESGPPAPSKPRRGRR-----PKSESQGNATKNDDINKPLSKG 1253
Query: 603 RAKSS 607
R +++
Sbjct: 1254 RKRAA 1258
>UNIPROTKB|I3LU95 [details] [associations]
symbol:PDS5A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008156 "negative regulation of DNA replication"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] InterPro:IPR016024 GO:GO:0005886 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000785
GO:GO:0008156 OMA:TKDAQSP GeneTree:ENSGT00390000012488
EMBL:FP326671 Ensembl:ENSSSCT00000029818 Uniprot:I3LU95
Length = 1291
Score = 182 (69.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 47/176 (26%), Positives = 91/176 (51%)
Query: 50 SRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEITRITAPDSPYDD-ELMKEFFQ 108
S + LP L + LR + DVRL V C+++I RI AP++PY + +K+ F
Sbjct: 13 SEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFL 72
Query: 109 LAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDLE-CDKLVVEMFQHFLKVIRSN 167
+ L + + +L+ +A V+S + +LE C+++ +++F+ VI ++
Sbjct: 73 FITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRTLFSVINNS 132
Query: 168 HPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKENQDVSPTSWKLGEKVFTK 223
H V M +M+ +I E + V+ +LL +L ++ +++++ S+ L KV K
Sbjct: 133 HNKKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLA-KVLLK 187
Score = 70 (29.7 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 38/161 (23%), Positives = 63/161 (39%)
Query: 337 SAGPDTSDSLRNVKSETEPESAPRKRGRKPNSLM-----NPEEGYDHSWISSGRKIAKVP 391
S G +T ++ NV SE P + R R + + N E ++ + I V
Sbjct: 1113 STGAETGSNI-NVNSELNPSTGNRSREQSSEAAETGVSENEENPVRIISVTPVKNIDPVK 1171
Query: 392 GRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLADPTSASL-KSGLPDGSHHRRGRTKKQG 450
+ + D+ + S ++ K+ + + T + +SG P S RRGR K
Sbjct: 1172 NKEINSDQAAQGNISSDRGKKRTVTAAGAENIQQKTDEKVDESGPPAPSKPRRGRRPKSE 1231
Query: 451 STVN--QNADHNS-LSVSLS-TRVEETASGSADFSLRKKPE 487
S N +N D N LS V + + G + K P+
Sbjct: 1232 SQGNATKNDDINKPLSKGRKRAAVSQESPGGLETGNAKAPK 1272
Score = 51 (23.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 12/75 (16%), Positives = 33/75 (44%)
Query: 798 LVNEVKASALKRWISRSTPASASKPKAKQSGGGSPAGATINKPIN---ADESKADLPEKE 854
L + K + + +++ A+ KP + +G + + +N +N + S+ E
Sbjct: 1085 LTGKPKPAGVLGAVNKPLSATGRKPYVRSTGAETGSNINVNSELNPSTGNRSREQSSEAA 1144
Query: 855 SNPKGDDQNSPAKLI 869
+++ +P ++I
Sbjct: 1145 ETGVSENEENPVRII 1159
Score = 50 (22.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 814 STPASASKPKAKQSGGGSPAGATINKPINADESKADLPEKESNPKG 859
S P +PK+ +S G + INKP++ +A + ++ +P G
Sbjct: 1220 SKPRRGRRPKS-ESQGNATKNDDINKPLSKGRKRAAVSQE--SPGG 1262
Score = 45 (20.9 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 28/124 (22%), Positives = 48/124 (38%)
Query: 732 VDNYDPIKKKHRILYADGDEEILNLKKERWELIKGGSSAEEQETDVLKPDGSSDILP--- 788
V N DP+K K I + + ++ + G+ +Q+TD K D S P
Sbjct: 1164 VKNIDPVKNKEINSDQAAQGNISSDRGKKRTVTAAGAENIQQKTDE-KVDESGPPAPSKP 1222
Query: 789 -KGKEEIEFELVNEVKASALKRWISRSTPASASKPKAKQSGGGSPAGATINKPINADESK 847
+G+ N K + + +S+ +A +++S GG G P D +K
Sbjct: 1223 RRGRRPKSESQGNATKNDDINKPLSKGRKRAAV---SQESPGGLETG-NAKAPKLQDVAK 1278
Query: 848 ADLP 851
P
Sbjct: 1279 KAAP 1282
Score = 44 (20.5 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 22/125 (17%), Positives = 49/125 (39%)
Query: 483 RKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKPLQLSVTKKRRRSL 542
R++ + ++T + + + IS P + + ++D+ +S + ++R+
Sbjct: 1137 REQSSEAAETGVSENEENPVRI-ISVTPVKNIDPVKNKEINSDQAAQGNISSDRGKKRT- 1194
Query: 543 VVAISAQNISEAXXXXXXXXXXXXXXXPNIDENYSEDTPKTEIKRKHTSGKEEKKMISKA 602
V A A+NI + P PK+E + T + K +SK
Sbjct: 1195 VTAAGAENIQQKTDEKVDESGPPAPSKPRRGRR-----PKSESQGNATKNDDINKPLSKG 1249
Query: 603 RAKSS 607
R +++
Sbjct: 1250 RKRAA 1254
Score = 37 (18.1 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 24/120 (20%), Positives = 45/120 (37%)
Query: 491 DTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKPLQLSVTKKRRRSLVVAISAQ- 549
++E+ +++ E+ S+ GVSE E P++ ++ + + + +AQ
Sbjct: 1125 NSELNPSTGNRSREQSSEAAETGVSENEENPVRIISVTPVK-NIDPVKNKEINSDQAAQG 1183
Query: 550 NIS-EAXXXXXXXXXXXXXXXPNIDENYSEDTPKTEIKRKHTSGKEEKKMISKARAKSSD 608
NIS + DE E P K + G+ K S+ A +D
Sbjct: 1184 NISSDRGKKRTVTAAGAENIQQKTDEKVDESGPPAPSKPRR--GRRPKSE-SQGNATKND 1240
>UNIPROTKB|Q5U241 [details] [associations]
symbol:pds5b-b "Sister chromatid cohesion protein PDS5
homolog B-B" species:8355 "Xenopus laevis" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISS] InterPro:IPR016024 InterPro:IPR017956
SMART:SM00384 GO:GO:0005634 GO:GO:0008285 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301
GO:GO:0003677 GO:GO:0007064 HOVERGEN:HBG108241 KO:K11267
EMBL:BC086289 RefSeq:NP_001088643.2 UniGene:Xl.49057
ProteinModelPortal:Q5U241 IntAct:Q5U241 PRIDE:Q5U241 GeneID:495695
KEGG:xla:495695 CTD:495695 Xenbase:XB-GENE-6041384 Uniprot:Q5U241
Length = 1464
Score = 194 (73.4 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 53/228 (23%), Positives = 113/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKEQYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E C+++ ++++ VI + H V M +M+ ++ E + VS +LL +L ++ +
Sbjct: 148 EDCNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIVCEGDTVSQELLDSVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHV 255
Score = 58 (25.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 25/110 (22%), Positives = 48/110 (43%)
Query: 324 SQVERSQSIDAKCSA-G-----PDTSDSLRNVKSETEPESAPRKRGRKPNSLMNPEEGYD 377
S+ + S++ID K G P SDS + + P + ++RGR P + P
Sbjct: 1335 SEEQDSENIDQKRKGRGSSKKTPQKSDSTDSALDTSRP-TPQKRRGRPPKT---PTVQQK 1390
Query: 378 HSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLADPT 427
S + RK+ + + + SP+L+++ E ++++A T
Sbjct: 1391 KSHVGRPRKVVSKEPESEEEMEISQNSPALSENISNEEETADEEVVAPST 1440
Score = 50 (22.7 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 32/135 (23%), Positives = 51/135 (37%)
Query: 685 ETPKTGVKRKLTAGKEMDSEAPALNEQLVGSRIKVWWPMDETFYKGVVDNYDPIKKKHR- 743
E+P T + L +E DSE + GS K D T +D P +K R
Sbjct: 1322 ESPPTDEEDHLEISEEQDSENIDQKRKGRGSSKKTPQKSDST--DSALDTSRPTPQKRRG 1379
Query: 744 --ILYADGDEEILNLKKERWELIKGGSSAEEQETDVLKPDGSSDILPKGK---EEIEFEL 798
++ ++ + R + K S EE E P S +I + + EE+
Sbjct: 1380 RPPKTPTVQQKKSHVGRPRKVVSKEPESEEEMEISQNSPALSENISNEEETADEEVVAPS 1439
Query: 799 VNEVKASALKRWISR 813
+ + +RWI R
Sbjct: 1440 TGRRRTAKKRRWIQR 1454
>POMBASE|SPAC110.02 [details] [associations]
symbol:pds5 "cohesin-associated protein Pds5"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IC] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0007062 "sister chromatid cohesion"
evidence=IGI] [GO:0030892 "mitotic cohesin complex" evidence=IGI]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0034613 "cellular protein localization" evidence=IMP]
[GO:0051455 "attachment of spindle microtubules to kinetochore
involved in homologous chromosome segregation" evidence=IMP]
[GO:0071459 "protein localization to chromosome, centromeric
region" evidence=IMP] [GO:0072356 "chromosome passenger complex
localization to kinetochore" evidence=IMP] [GO:2000281 "regulation
of histone H3-T3 phosphorylation" evidence=IDA] [GO:2000817
"regulation of histone H3-T3 phosphorylation involved in chromosome
passenger complex localization to kinetochore" evidence=IMP]
InterPro:IPR016024 PomBase:SPAC110.02 EMBL:CU329670 SUPFAM:SSF48371
GO:GO:0000775 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301
GenomeReviews:CU329670_GR GO:GO:0006974 GO:GO:0000070 GO:GO:0000794
GO:GO:0071459 GO:GO:0051455 GO:GO:0007062 GO:GO:0030892 KO:K11267
eggNOG:NOG268017 EMBL:AB067651 EMBL:AF049529 PIR:T43647
RefSeq:NP_593535.1 ProteinModelPortal:Q9HFF5 IntAct:Q9HFF5
STRING:Q9HFF5 EnsemblFungi:SPAC110.02.1 GeneID:2541628
KEGG:spo:SPAC110.02 OMA:CESATMR OrthoDB:EOG44XNR4 NextBio:20802721
GO:GO:2000817 Uniprot:Q9HFF5
Length = 1205
Score = 199 (75.1 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 46/171 (26%), Positives = 88/171 (51%)
Query: 34 LLDKVEHLLANVEQAPSRSM-RDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEITRIT 92
+L ++ LL + ++ RD++LP + L+ N+LL D +R CI E+ R+
Sbjct: 23 ILKRLRDLLGELTSLSQDTIDRDSVLPVARSLVNNNLLHHKDKGIRSYTLCCIVELLRLC 82
Query: 93 APDSPYDDELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL-ECDK 151
APD+P+ +++ FQ+ + L + YY + IL++++ V+S +L++DL ++
Sbjct: 83 APDAPFTLSQLEDIFQVILKILSGLMNQESTYYPQIYEILESLSNVKSAVLIVDLPNAEE 142
Query: 152 LVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASV 202
+V +F+ F + R V M I+ +I+E + L IL A +
Sbjct: 143 FLVNIFRLFFDLARKGTTKNVEFYMLDIINQLINEINTIPAAALNILFAQL 193
Score = 49 (22.3 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 29/140 (20%), Positives = 58/140 (41%)
Query: 788 PKGKEEIEFELVNEVKASALKRWISRS---TPASASKPK-AKQSGGGSPAGATINKPINA 843
PK + ++ +E++ + + K+ I TP S+ + A ++ S A T NK N
Sbjct: 1068 PK-QIKLPYEILRPIPSIDEKKRIFNKIFITPKMESQIEHAIRTPVSSFAKQTTNKHANL 1126
Query: 844 DESKADLPEKESNPKGDDQNSPAKLILKDRKLIFTLNKQQQAVFKGERHNARDGESAVDN 903
+ K + + +N + + + I + ++ + F+G R N + S+ +
Sbjct: 1127 KQKKTHSSKSDKKSSRRRKNEKRRKLNEQNPNIRNVPERSSSRFQGIRINYSEAPSSSEE 1186
Query: 904 PVERSKEAVKGSSSNDFGTI 923
E +E S DF I
Sbjct: 1187 ISEEEEEI----SEEDFDEI 1202
Score = 45 (20.9 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 460 NSLSVSLSTRVEETASGSADFSLRKKPEDRSDTEI----KHRKRSKTNEE 505
+++ +S+ ++T + A+ +K +SD + K+ KR K NE+
Sbjct: 1106 HAIRTPVSSFAKQTTNKHANLKQKKTHSSKSDKKSSRRRKNEKRRKLNEQ 1155
Score = 41 (19.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 588 KHTSGKEEKKMISKARAKSSDR 609
KH + K++K SK+ KSS R
Sbjct: 1122 KHANLKQKKTHSSKSDKKSSRR 1143
>UNIPROTKB|Q4KLU7 [details] [associations]
symbol:pds5a-b "Sister chromatid cohesion protein PDS5
homolog A-B" species:8355 "Xenopus laevis" [GO:0008156 "negative
regulation of DNA replication" evidence=ISS] InterPro:IPR016024
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0007067 GO:GO:0008156
UniGene:Xl.76790 Xenbase:XB-GENE-5812802 HOVERGEN:HBG108241
EMBL:BC098992 RefSeq:NP_001090063.1 ProteinModelPortal:Q4KLU7
PRIDE:Q4KLU7 GeneID:735137 KEGG:xla:735137 CTD:23244 KO:K11267
Uniprot:Q4KLU7
Length = 1323
Score = 191 (72.3 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 52/201 (25%), Positives = 102/201 (50%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
DEV+ L V +++Q S + LP L ++ LR + DVRL V C+++I
Sbjct: 31 DEVVKRLKMVVKTFMDMDQ-DSEEEKQQYLPLALHLSSDFFLRNPNKDVRLLVACCLADI 89
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +KE F + L + + +L+ +A V+S + +L
Sbjct: 90 FRIYAPEAPYTSHDKLKEIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFEL 149
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E C+++ +++F+ VI ++H V M +M+ + E + V+ + L +L ++ +
Sbjct: 150 EDCNEIFIQLFKTLFSVINNSHNQKVQMHMLDLMSSITMEGDGVTQEQLDSILINLISAH 209
Query: 207 QDVSPTSWKLGEKVFTKCAAK 227
++++ ++ L KV K A+
Sbjct: 210 KNLNKQAFDLA-KVLLKRTAQ 229
Score = 55 (24.4 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 63/293 (21%), Positives = 111/293 (37%)
Query: 258 DENPQHGHLIG-SENQLATKE---PDPPCLGEVVHDVDGISKSVTSNGTAASRNEDSVVK 313
+EN H + EN T++ PD P E + V ++ V N +A +E S K
Sbjct: 1034 NENNSHAFMKKLCENIKQTRDAQAPDDPKANEKLFTVCDVALCVVYNKSAPCHSESS--K 1091
Query: 314 DKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETEPE--------SAP-RKRGR 364
D VL + + +K +D RN+ +P+ + P GR
Sbjct: 1092 DP---VLPLTFFTQPDKDFSSKSYI----TDEARNLLLTGKPKPMTVLGMVNKPLNATGR 1144
Query: 365 KPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLA 424
+P S E ++ I+S A V R+ S+ + S + + ++
Sbjct: 1145 RPYSRSTGSEISNNVSINS-ESDASVANRQSSEVPEIGVSENDENPVRLISVPPAKTETV 1203
Query: 425 DPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVSLSTRVEETASGSADFSLRK 484
+L P + RG KK+ S + A+ N S +V+ ++ R
Sbjct: 1204 KNKEVNLDQTAPSNTGTERG--KKR-SAASAGAE-NIRKESEEKKVDNISATPTPKPRRG 1259
Query: 485 KPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKPLQLSVTKK 537
+P +S+++ K N+E S+P G G A S+ ++ V K+
Sbjct: 1260 RPP-KSESQGSAAK----NDETSKPSGRGRKRAAANQESSGAQEAANAKVPKQ 1307
Score = 47 (21.6 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 15/65 (23%), Positives = 26/65 (40%)
Query: 811 ISRSTPASASKPKAKQSGGGSPAGATINKPINADESKAD--------LPEKESNPKGDDQ 862
+ ++ P++ + K+ S I K ++E K D P + PK + Q
Sbjct: 1210 LDQTAPSNTGTERGKKRSAASAGAENIRK--ESEEKKVDNISATPTPKPRRGRPPKSESQ 1267
Query: 863 NSPAK 867
S AK
Sbjct: 1268 GSAAK 1272
Score = 43 (20.2 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 15/73 (20%), Positives = 31/73 (42%)
Query: 798 LVNEVKASALKRWISRSTPASASKPKAKQSGGGSPAGATINKPINADESKADLPE-KESN 856
L + K + +++ A+ +P ++ +G +IN +A + E E
Sbjct: 1122 LTGKPKPMTVLGMVNKPLNATGRRPYSRSTGSEISNNVSINSESDASVANRQSSEVPEIG 1181
Query: 857 PKGDDQNSPAKLI 869
+D+N P +LI
Sbjct: 1182 VSENDEN-PVRLI 1193
>UNIPROTKB|F1Q0Z0 [details] [associations]
symbol:PDS5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IEA] [GO:0000785 "chromatin" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR016024
InterPro:IPR017956 SMART:SM00384 GO:GO:0008285 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0000785
GO:GO:0007064 KO:K11267 GeneTree:ENSGT00390000012488 CTD:23047
OMA:AKKGPPR EMBL:AAEX03014215 RefSeq:XP_543139.3
Ensembl:ENSCAFT00000010289 GeneID:486014 KEGG:cfa:486014
Uniprot:F1Q0Z0
Length = 1447
Score = 186 (70.5 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 53/228 (23%), Positives = 112/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E +++ ++++ VI + H V M +M+ +I E + VS +LL +L ++ +
Sbjct: 148 EDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHV 255
Score = 59 (25.8 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 34/151 (22%), Positives = 64/151 (42%)
Query: 721 WPMDETFYKGVVDNYD----PIKKKHR-----ILYADGDEEILNLK-KERWELIKGGSSA 770
WP ++ + +++N D P KK R L +E +K ++ K G SA
Sbjct: 1264 WPEEKRLKEDILENEDEQNSPPKKGKRGRPPKPLGGGTPKEEPTMKTSKKGAKKKSGPSA 1323
Query: 771 EEQETDVLKPDGSSDILPKGKEEIEFELVNEVKASALKRWISRSTPASASKPKAKQSGGG 830
E+E + + G+++ K K+ + +A + + ST ++ K + + S
Sbjct: 1324 PEEEEEEERQSGNTEQKSKSKQHRTSRRAQQ-RAESPETSAVESTQSTPQKGRGRPSKTP 1382
Query: 831 SPAGATINKPINADESK-ADLPEKESNPKGD 860
SP+ K + SK A E +S+ + D
Sbjct: 1383 SPSQP--KKNVRVGRSKQAATKENDSSEEVD 1411
Score = 46 (21.3 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 25/98 (25%), Positives = 42/98 (42%)
Query: 821 KPKAKQSGG--GSPAGATINKPINADES-KADLPEKESNPKGDDQNSPAKLILKDR--KL 875
KPK Q G G A + + ++ K D+ E E D+QNSP K + R K
Sbjct: 1242 KPKGSQRGRKRGHTASESDEQQWPEEKRLKEDILENE-----DEQNSPPKKGKRGRPPKP 1296
Query: 876 IFTLNKQQQAVFKGERHNAR--DGESAVDNPVERSKEA 911
+ +++ K + A+ G SA + E +++
Sbjct: 1297 LGGGTPKEEPTMKTSKKGAKKKSGPSAPEEEEEEERQS 1334
Score = 43 (20.2 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 581 PKTEIKRKHTSGKEEKKMISKARAKSSDRDGSHSKETP 618
P+ E + + SG E+K SK++ + R E+P
Sbjct: 1324 PEEEEEEERQSGNTEQK--SKSKQHRTSRRAQQRAESP 1359
>UNIPROTKB|F1N7G8 [details] [associations]
symbol:PDS5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA]
InterPro:IPR016024 GO:GO:0008285 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0000785 GO:GO:0007064
GeneTree:ENSGT00390000012488 OMA:AKKGPPR EMBL:DAAA02033076
IPI:IPI00826394 Ensembl:ENSBTAT00000015410 Uniprot:F1N7G8
Length = 1449
Score = 186 (70.5 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 53/228 (23%), Positives = 112/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E +++ ++++ VI + H V M +M+ +I E + VS +LL +L ++ +
Sbjct: 148 EDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHV 255
Score = 59 (25.8 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 33/151 (21%), Positives = 62/151 (41%)
Query: 721 WPMDETFYKGVVDNYD----PIKKKHR-----ILYADGDEEILNLK-KERWELIKGGSSA 770
WP ++ + +++N D P KK R L +E +K ++ K G SA
Sbjct: 1264 WPEEKRLKEDILENEDEQNSPPKKGKRGRPPKPLGGGTPKEEPTMKTSKKGSKKKSGPSA 1323
Query: 771 EEQETDVLKPDGSSDILPKGKEEIEFELVNEVKASALKRWISRSTPASASKPKAKQSGGG 830
E+E + + G+++ K K+ + +A + + T ++ K + S
Sbjct: 1324 AEEEEEEERQSGNTEQKSKSKQHRTSRRAQQSRAESPDTTAAEPTQSTPQKGRGGPSKTP 1383
Query: 831 SPAGATINKPINADESK-ADLPEKESNPKGD 860
SP+ K + SK A E +S+ + D
Sbjct: 1384 SPSQPP--KKVRVGRSKQAATKENDSSEEID 1412
Score = 57 (25.1 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 32/144 (22%), Positives = 57/144 (39%)
Query: 779 KPDGSSDILPKGKEEIEFELVNEVKASALKRWISRSTPASASKPKAKQSGGGSPAGATIN 838
KP GS +G E + + LK I + S PK K G P
Sbjct: 1242 KPKGSQRGRKRGHTASESDEQQWPEEKRLKEDILENEDEQNSPPK-KGKRGRPP------ 1294
Query: 839 KPINADESKADLPEKESNPKGDDQNS-PAKLILKDRKLIFTLNKQQQAVFKGERHNARDG 897
KP+ K + P +++ KG + S P+ ++ + + N +Q++ K R + R
Sbjct: 1295 KPLGGGTPKEE-PTMKTSKKGSKKKSGPSAAEEEEEEERQSGNTEQKSKSKQHRTSRRAQ 1353
Query: 898 ESAVDNPVERSKEAVKGSSSNDFG 921
+S ++P + E + + G
Sbjct: 1354 QSRAESPDTTAAEPTQSTPQKGRG 1377
>UNIPROTKB|Q4QXM3 [details] [associations]
symbol:pds5a-a "Sister chromatid cohesion protein PDS5
homolog A-A" species:8355 "Xenopus laevis" [GO:0005515 "protein
binding" evidence=IPI] [GO:0008156 "negative regulation of DNA
replication" evidence=ISS] InterPro:IPR016024 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0007067 GO:GO:0008156
EMBL:AY695731 UniGene:Xl.76790 ProteinModelPortal:Q4QXM3
IntAct:Q4QXM3 PRIDE:Q4QXM3 Xenbase:XB-GENE-5812802
HOVERGEN:HBG108241 Uniprot:Q4QXM3
Length = 1323
Score = 189 (71.6 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 52/201 (25%), Positives = 101/201 (50%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
DEV+ L V +++Q S + LP L + LR + DVRL V C+++I
Sbjct: 31 DEVVKRLKMVVKTYMDMDQ-DSEEEKQQYLPLALHLSSEFFLRNPNKDVRLLVACCLADI 89
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +KE F + L + + +L+ +A V+S + +L
Sbjct: 90 FRIYAPEAPYTSHDKLKEIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFEL 149
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E C+++ +++F+ VI ++H V M +M+ + E + V+ + L +L ++ +
Sbjct: 150 EDCNEIFIQLFKTLFSVINNSHNQKVQMHMLDLMSSITMEGDGVTQEQLDSILINLISAH 209
Query: 207 QDVSPTSWKLGEKVFTKCAAK 227
++++ ++ L KV K A+
Sbjct: 210 KNLNKQAFDLA-KVLLKRTAQ 229
Score = 55 (24.4 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 59/293 (20%), Positives = 105/293 (35%)
Query: 258 DENPQHGHLIG-SENQLATKE---PDPPCLGEVVHDVDGISKSVTSNGTAASRNEDSVVK 313
+EN H + EN T++ PD P E + V ++ V N +A +E S K
Sbjct: 1034 NENNSHAFMKKLCENIKQTRDAQAPDDPKANEKLFTVCDVALCVVYNKSAPCHSESS--K 1091
Query: 314 DKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETEPE--------SAP-RKRGR 364
D VL + + +K +D RN+ +P+ + P GR
Sbjct: 1092 DP---VLPLTFFTQPDKDFSSKSYI----TDEARNLLLTGKPKPMTVLGMVNKPLNATGR 1144
Query: 365 KPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLA 424
+P S E ++ I+S A V R+ S+ + S + + ++
Sbjct: 1145 RPYSRSTGSEISNNVSINS-ESDASVANRQSSEVPEIGVSENDENPVRLISVPPAKTETV 1203
Query: 425 DPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVSLSTRVEETASGSADFSLRK 484
+L P + RG+ + S +N S EE + + +
Sbjct: 1204 KNKEVNLDQTAPSNTGTERGKKRSAASAGAENIRKES---------EEKKADNISATPTP 1254
Query: 485 KPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKPLQLSVTKK 537
KP + + + + N+E S+P G G A S+ ++ V K+
Sbjct: 1255 KPRRGRPPKSESQGSAAKNDETSKPSGRGRKRAAANQESSGAQEAANAKVPKQ 1307
Score = 51 (23.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 16/65 (24%), Positives = 27/65 (41%)
Query: 811 ISRSTPASASKPKAKQSGGGSPAGATINKPINADESKAD--------LPEKESNPKGDDQ 862
+ ++ P++ + K+ S I K ++E KAD P + PK + Q
Sbjct: 1210 LDQTAPSNTGTERGKKRSAASAGAENIRK--ESEEKKADNISATPTPKPRRGRPPKSESQ 1267
Query: 863 NSPAK 867
S AK
Sbjct: 1268 GSAAK 1272
Score = 44 (20.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 28/127 (22%), Positives = 49/127 (38%)
Query: 798 LVNEVKASALKRWISRSTPASASKPKAKQSGGGSPAGATINKPINADESKADLPE-KESN 856
L + K + +++ A+ +P ++ +G +IN +A + E E
Sbjct: 1122 LTGKPKPMTVLGMVNKPLNATGRRPYSRSTGSEISNNVSINSESDASVANRQSSEVPEIG 1181
Query: 857 PKGDDQNSPAKLI-LKDRKLIFTLNKQ----QQAVFK-G-ERHNARDGESAVDNPVERSK 909
+D+N P +LI + K NK+ Q A G ER R SA + +
Sbjct: 1182 VSENDEN-PVRLISVPPAKTETVKNKEVNLDQTAPSNTGTERGKKRSAASAGAENIRKES 1240
Query: 910 EAVKGSS 916
E K +
Sbjct: 1241 EEKKADN 1247
>UNIPROTKB|Q5F3U9 [details] [associations]
symbol:PDS5B "Sister chromatid cohesion protein PDS5
homolog B" species:9031 "Gallus gallus" [GO:0051301 "cell division"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR016024
GO:GO:0005634 GO:GO:0008285 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301 GO:GO:0007064
HOVERGEN:HBG108241 eggNOG:NOG268017 HOGENOM:HOG000230672
EMBL:AJ851551 IPI:IPI00592195 UniGene:Gga.33882 STRING:Q5F3U9
PRIDE:Q5F3U9 InParanoid:Q5F3U9 Uniprot:Q5F3U9
Length = 1412
Score = 186 (70.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 53/228 (23%), Positives = 112/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E +++ ++++ VI + H V M +M+ +I E + VS +LL +L ++ +
Sbjct: 148 EDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHV 255
Score = 56 (24.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 28/123 (22%), Positives = 50/123 (40%)
Query: 349 VKSETEPESAPRK--RGR--KPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCS 404
++SE E S P+K RGR KPN+ P+E AK R K
Sbjct: 1273 IESEDEQNSPPKKGRRGRPPKPNNGGTPKE----------EPAAKSSKRSKKKQTSAAAV 1322
Query: 405 PSLNQDSKKEALNLTDKMLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSV 464
++ +++ N+ K ++ ++ R GR+K+ S N++++ +
Sbjct: 1323 EEEEEEEERQTENIEQKPKGRQNRSTKRT-----QQSRAGRSKQAASKENESSEEMDVFQ 1377
Query: 465 SLS 467
S S
Sbjct: 1378 SSS 1380
Score = 40 (19.1 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 10/51 (19%), Positives = 25/51 (49%)
Query: 768 SSAEEQETDVLKPDGSSDILPKGKEEIEFELVNEVKASALKRWISRSTPAS 818
++ EE+E + + + + PKG++ + + +A K+ S+ +S
Sbjct: 1320 AAVEEEEEEEERQTENIEQKPKGRQNRSTKRTQQSRAGRSKQAASKENESS 1370
>FB|FBgn0260012 [details] [associations]
symbol:pds5 species:7227 "Drosophila melanogaster"
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0030717 "karyosome
formation" evidence=IMP] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0008278 "cohesin complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR016024
EMBL:AE013599 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0005700 GO:GO:0030717 GO:GO:0007062
KO:K11267 eggNOG:NOG268017 GeneTree:ENSGT00390000012488 OMA:NMIARRI
EMBL:BT053744 RefSeq:NP_001246271.1 RefSeq:NP_610719.1
UniGene:Dm.4304 IntAct:A1Z8S6 STRING:A1Z8S6
EnsemblMetazoa:FBtr0087974 EnsemblMetazoa:FBtr0306062 GeneID:36286
KEGG:dme:Dmel_CG17509 UCSC:CG17509-RA CTD:36286 FlyBase:FBgn0260012
OrthoDB:EOG402V70 ChiTaRS:pds5 GenomeRNAi:36286 NextBio:797748
Uniprot:A1Z8S6
Length = 1218
Score = 188 (71.2 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 45/218 (20%), Positives = 112/218 (51%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
DE+I L + ++L ++Q ++ +P L+ + ++ DV+L + C++++
Sbjct: 20 DELIRRLKTLANVLQTMDQ--DDNLYQQYIPLALHLLDDFFMQHPSRDVQLLIACCVADV 77
Query: 89 TRITAPDSPY-DDELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
R+ AP++PY + + +K F+ + L + + +L+ +A V+S + +L
Sbjct: 78 LRVYAPEAPYKEQDQIKTIFKFFIKQLHGLKDPRDPSFKRYFYLLENLAFVKSFNMCFEL 137
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E C ++ ++F K++ H V +++ +I E++++S +LL ++L ++ +
Sbjct: 138 EDCQEIFQDLFSTIFKIVNDQHSVKVTNFFLDVLSPLITEADNLSVELLDLILINIVEPY 197
Query: 207 QDVSPTSWKLGEKVFTKCAAKLKTNLKEAVQSRGIALD 244
+ + + +L E++ TK L++ +K +R + +D
Sbjct: 198 KSNNKFACQLTEQLLTKTGDALESTIKMFF-NRALVMD 234
>UNIPROTKB|Q9NTI5 [details] [associations]
symbol:PDS5B "Sister chromatid cohesion protein PDS5
homolog B" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0008285 "negative regulation of
cell proliferation" evidence=IDA] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=IMP] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0000785 "chromatin" evidence=IDA] [GO:0005524
"ATP binding" evidence=TAS] [GO:0008283 "cell proliferation"
evidence=TAS] [GO:0042127 "regulation of cell proliferation"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR016024 InterPro:IPR017956 SMART:SM00384 GO:GO:0005524
GO:GO:0005634 Reactome:REACT_115566 GO:GO:0008285 SUPFAM:SSF48371
Reactome:REACT_21300 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0003677 GO:GO:0008283
GO:GO:0000785 GO:GO:0007064 HOVERGEN:HBG108241 KO:K11267
eggNOG:NOG268017 OrthoDB:EOG46T30N EMBL:U95825 EMBL:AB023196
EMBL:AK026889 EMBL:AL137201 EMBL:AL138820 EMBL:Z75889 EMBL:BC039256
EMBL:BC070274 IPI:IPI00240812 IPI:IPI00845253 IPI:IPI00845353
IPI:IPI00845446 IPI:IPI00845459 RefSeq:NP_055847.1
UniGene:Hs.646051 ProteinModelPortal:Q9NTI5 SMR:Q9NTI5
IntAct:Q9NTI5 STRING:Q9NTI5 PhosphoSite:Q9NTI5 DMDM:74725312
PaxDb:Q9NTI5 PRIDE:Q9NTI5 DNASU:23047 Ensembl:ENST00000315596
Ensembl:ENST00000450460 GeneID:23047 KEGG:hsa:23047 UCSC:uc001uun.3
UCSC:uc001uuo.3 UCSC:uc010abf.3 CTD:23047 GeneCards:GC13P033160
HGNC:HGNC:20418 HPA:HPA039513 HPA:HPA040015 MIM:605333
neXtProt:NX_Q9NTI5 PharmGKB:PA162399098 OMA:AKKGPPR ChiTaRS:PDS5B
GenomeRNAi:23047 NextBio:44084 ArrayExpress:Q9NTI5 Bgee:Q9NTI5
CleanEx:HS_PDS5B Genevestigator:Q9NTI5 Uniprot:Q9NTI5
Length = 1447
Score = 186 (70.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 53/228 (23%), Positives = 112/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E +++ ++++ VI + H V M +M+ +I E + VS +LL +L ++ +
Sbjct: 148 EDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHV 255
Score = 56 (24.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 41/187 (21%), Positives = 81/187 (43%)
Query: 721 WPMDETFYKGVVDNYD----PIKKKHR-----ILYADGDEEILNLK-KERWELIKGGSSA 770
WP ++ + +++N D P KK R L +E +K ++ K G A
Sbjct: 1264 WPEEKRLKEDILENEDEQNSPPKKGKRGRPPKPLGGGTPKEEPTMKTSKKGSKKKSGPPA 1323
Query: 771 EEQETDVLKPDGSSDILPKGKEEIEFELVNEVKASALKRWISRSTPASASKPKAKQSGGG 830
E+E + + G+++ K K+ + +A + + ST ++ K + + S
Sbjct: 1324 PEEEEEEERQSGNTEQKSKSKQHRVSRRAQQ-RAESPESSAIESTQSTPQKGRGRPSKTP 1382
Query: 831 SPAGATINKPINADESK-ADLPEKESNPKGD--DQNSPAKLILKDR---KLIFTLNKQQQ 884
SP+ K + SK A E +S+ + D +SP I ++ + + T+N +++
Sbjct: 1383 SPSQP--KKNVRVGRSKQAATKENDSSEEVDVFQGSSPVDDIPQEETEEEEVSTVNVRRR 1440
Query: 885 AVFKGER 891
+ K ER
Sbjct: 1441 SA-KRER 1446
Score = 40 (19.1 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 581 PKTEIKRKHTSGKEEKKMISKARAKSSDRDGSHSKETP 618
P+ E + + SG E+K SK++ R E+P
Sbjct: 1324 PEEEEEEERQSGNTEQK--SKSKQHRVSRRAQQRAESP 1359
>ZFIN|ZDB-GENE-091217-2 [details] [associations]
symbol:pds5b "PDS5, regulator of cohesion
maintenance, homolog B (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR016024
InterPro:IPR017956 SMART:SM00384 ZFIN:ZDB-GENE-091217-2
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677
GeneTree:ENSGT00390000012488 OMA:AKKGPPR EMBL:CR855379
EMBL:CT027778 EMBL:CU369047 IPI:IPI00501181
Ensembl:ENSDART00000087246 Uniprot:E7EXW9
Length = 1415
Score = 187 (70.9 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 52/228 (22%), Positives = 113/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSAQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E +++ ++++ +VI + H V M +M+ ++ E + VS +LL +L ++ +
Sbjct: 148 EDSNEIFTQLYRTLFQVINNGHNQKVHMHMVDLMSSIVCEGDSVSQELLDTVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSVSDLSEHV 255
Score = 54 (24.1 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 22/98 (22%), Positives = 47/98 (47%)
Query: 771 EEQETDVLKPDGSS--DILPKGKEEIEFEL-VNEVKASALKRWIS--RSTPASASKPKAK 825
EE++ D + GS ++ PKG+ + ++ V+E + +++ R P + K
Sbjct: 1299 EEEDEDEEEDAGSENMEVKPKGRRGRKPKVDVSETASDSVETTPQKRRGRPPKSQTAARK 1358
Query: 826 QSGGGSPAGATINKPINADESKADLPEKESNPKGDDQN 863
SGG S A A +ES+ ++ + + + +D++
Sbjct: 1359 ASGGRSRAAAH-----QEEESEEEMDTVQQSEEDEDES 1391
Score = 48 (22.0 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 356 ESAPRKR-GRKPNSLMNPEEGYD-------HSWISSGRKIAKVPGRRKSDDKGVDCSPSL 407
E+ P+KR GR P S + H S ++ V + +D+ VD SP +
Sbjct: 1339 ETTPQKRRGRPPKSQTAARKASGGRSRAAAHQEEESEEEMDTVQQSEEDEDESVDSSPKV 1398
Query: 408 NQD 410
+Q+
Sbjct: 1399 SQN 1401
Score = 40 (19.1 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 573 DENYSED--TPKTEIKRKHTSGKEEKKMISKARAKS 606
DE+ ED + E+K K G++ K +S+ + S
Sbjct: 1302 DEDEEEDAGSENMEVKPKGRRGRKPKVDVSETASDS 1337
>UNIPROTKB|Q498H0 [details] [associations]
symbol:pds5b-a "Sister chromatid cohesion protein PDS5
homolog B-A" species:8355 "Xenopus laevis" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISS] InterPro:IPR016024 InterPro:IPR017956
SMART:SM00384 GO:GO:0005634 GO:GO:0008285 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301
GO:GO:0003677 GO:GO:0007064 HOVERGEN:HBG108241 KO:K11267
EMBL:BC100220 EMBL:AY695732 RefSeq:NP_001089658.1 UniGene:Xl.51523
ProteinModelPortal:Q498H0 IntAct:Q498H0 GeneID:734718
KEGG:xla:734718 CTD:734718 Xenbase:XB-GENE-6255297 Uniprot:Q498H0
Length = 1448
Score = 182 (69.1 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 52/228 (22%), Positives = 112/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKEQYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFISRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E +++ ++++ VI + H V M +M+ ++ E + VS +LL +L ++ +
Sbjct: 148 EDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIVCEGDTVSQELLDSVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHV 255
Score = 58 (25.5 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 25/103 (24%), Positives = 49/103 (47%)
Query: 834 GATINKPINADE----SKADLPEKESNPK-GDDQNSPAKLI--LKDRKLIFTLNKQ--QQ 884
GA +NKP+++ SK+ E SN G + +SP K+ L +L + N+
Sbjct: 1132 GA-VNKPLSSAGKQMLSKSSRMETVSNASSGSNPSSPGKIKGRLDSMELDQSENEDYTMS 1190
Query: 885 AVFKGERHNARDGESAVDNPVERSKEAVKGSSSNDFGTIVMDD 927
+ G++ + RD + + +E+ + K S + ++ MD+
Sbjct: 1191 SPLSGKKSDKRDDSDLLKSELEKPRRGKKQSLIDQDDSLSMDE 1233
Score = 55 (24.4 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 34/145 (23%), Positives = 54/145 (37%)
Query: 256 SDDENPQHGH---LIGSENQLATKEPDPPCLGEVVHDVDGISKSVTSNGTAASRNEDSVV 312
S+ E P+ G LI ++ L+ E P + AAS +E+
Sbjct: 1209 SELEKPRRGKKQSLIDQDDSLSMDELSKPAQ----EPKSRTGQRGRKRAAAASDSEEQTW 1264
Query: 313 KDKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETEPESAPRKRGRKPNSLMN- 371
++K + E + E Q+ K S + S+ EP KRGRK +
Sbjct: 1265 QEK--RLKEDLLENEDEQNSPPKKGRRGRPPKSAKMAISKEEPTVTTPKRGRKKAVPVES 1322
Query: 372 -PEEGYDHSWISSGRKIAKVPGRRK 395
P + DH IS + + +RK
Sbjct: 1323 PPTDEDDHLEISEEQDFENIDQKRK 1347
>ASPGD|ASPL0000065875 [details] [associations]
symbol:bimD species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0043935 "sexual sporulation resulting in
formation of a cellular spore" evidence=IMP] [GO:0071459 "protein
localization to chromosome, centromeric region" evidence=IEA]
[GO:0051455 "attachment of spindle microtubules to kinetochore
involved in homologous chromosome segregation" evidence=IEA]
[GO:2000817 "regulation of histone H3-T3 phosphorylation involved
in chromosome passenger complex localization to kinetochore"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0030892 "mitotic cohesin complex" evidence=IEA]
InterPro:IPR016024 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:BN001304 EMBL:AACD01000127 KO:K11267
OrthoDB:EOG44XNR4 RefSeq:XP_680565.1 ProteinModelPortal:Q5AWN4
EnsemblFungi:CADANIAT00000142 GeneID:2870172 KEGG:ani:AN7296.2
HOGENOM:HOG000168219 OMA:FAITHET Uniprot:Q5AWN4
Length = 1506
Score = 177 (67.4 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 58/216 (26%), Positives = 105/216 (48%)
Query: 27 PVDEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCIS 86
P+ +++ L + L +EQ +++L + L T LL D VR T CI
Sbjct: 44 PIADLLQRLQTLAQELRKLEQEEIE--KESLRKVSQELATAQLLAHKDKGVRAWATCCIV 101
Query: 87 EITRITAPDSPYDDELMKEFFQLAVSAF-ENLSHASGRYYMKALSILDTVAKVRSCLLML 145
++ R+ APD+P+ +K+ F VS+ L S Y + + +L+++A+V+S +LM
Sbjct: 102 DVLRLCAPDAPFTANQLKDIFTCIVSSIIPALGDPSNPYNAQHIYVLNSLAEVKSIVLMT 161
Query: 146 DLEC-DKLVVEMFQHFLKVIRSN------HP--HFVFAAMETIMTLVIDESEDVSWDLLR 196
DL+ D L+V +F ++ + P V M ++ VIDES ++ D++
Sbjct: 162 DLDHPDTLIVPLFISCFDIVAGSAKASTGEPVAKNVEYDMTRLLVTVIDESPVLAPDVVD 221
Query: 197 ILLASVRKENQDVSPTSWKLGEKVFTKCAAKLKTNL 232
+++A + + V K G+K T+ K +T L
Sbjct: 222 VIVAQFLRVDPRVLDGPGKKGKKPETQVDEKQETLL 257
Score = 66 (28.3 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 23/84 (27%), Positives = 39/84 (46%)
Query: 351 SETEPESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQD 410
S T ++ P K+ R+ N + EEG D +S ++ + R D + P L +
Sbjct: 295 SATGTQNGPSKQARRTNLDDSDEEGEDIKELSKAHRLIRELWRA-CPDVLQNVIPQLEAE 353
Query: 411 SKKEALNLTDKMLADPTSASLKSG 434
E+++L ++LA T L SG
Sbjct: 354 LSAESVSL--RLLATQTIGDLTSG 375
Score = 56 (24.8 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 21/89 (23%), Positives = 43/89 (48%)
Query: 307 NEDSVVKDKLSNVLERCSQVERSQSIDAKCSAG-PDTSDSLRNVKSETEPESAPRKRGRK 365
+ED + D+L+ + + E Q+ D + + + S++ N+ E E + P ++ +
Sbjct: 1405 DEDDMEMDELNQARDDEDEGE-DQAKDIENGSDLSELSEADSNMLEEPEDDDGPSEKEDQ 1463
Query: 366 PNSLMN-PEEGYDHSWISSGRKIAKVPGR 393
P+ N ++ S + K AKVPG+
Sbjct: 1464 PDDKQNGDDDAQPASPVPVASK-AKVPGK 1491
Score = 45 (20.9 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 22/95 (23%), Positives = 40/95 (42%)
Query: 825 KQSGGGSPAGATINKPINADESKADLPEKESNPKGDDQNSPAKLILKDRKLIFTLNKQQQ 884
+ G S AGA K + E D + K + +S K + F + K++
Sbjct: 1303 RTKNGSSQAGAKKRKTDSTQEPSRDANAAKKARKNSESSSRRKS--GSSAVGFKMPKRKS 1360
Query: 885 AVFKGERHNARDGESA--VDNPVERSKEAVKGSSS 917
G+ ++ DGE+A V + + + +GS+S
Sbjct: 1361 TKKTGDDWSS-DGEAAGNVASSSATRRRSNRGSAS 1394
Score = 43 (20.2 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 9/45 (20%), Positives = 23/45 (51%)
Query: 287 VHDVDGISKSVTSNGTAASRNEDSVVKDKLSNVLERCSQVERSQS 331
V D + K++ + ++++ + L+ +L RCS + ++S
Sbjct: 735 VSDYRTVIKAIKELARRLQSSNNTILHETLTTLLYRCSSIVFNRS 779
Score = 42 (19.8 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 39/189 (20%), Positives = 71/189 (37%)
Query: 347 RNVKSETEP--ESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKS-DDKGVDC 403
R S EP ++ K+ RK NS + S + G K+ K +K+ DD D
Sbjct: 1316 RKTDSTQEPSRDANAAKKARK-NSESSSRRKSGSSAV--GFKMPKRKSTKKTGDDWSSDG 1372
Query: 404 SPSLNQDSKKEALNLTDK-------MLADPTSASLKSGLPDGSHHR--RGRTKKQGSTVN 454
+ N S +++ ADP S + + + R + Q +
Sbjct: 1373 EAAGNVASSSATRRRSNRGSASRRISYADPDSDEDDMEMDELNQARDDEDEGEDQAKDIE 1432
Query: 455 QNADHNSLSVSLSTRVEETASGSADFSLRKKPEDRSDTEIKHRKRSKTNEEISQPPGYGV 514
+D + LS + S +EE +P+D+ + + + S S+ G
Sbjct: 1433 NGSDLSELSEADSNMLEEPEDDDGPSEKEDQPDDKQNGDDDAQPASPV-PVASKAKVPGK 1491
Query: 515 SEKEAVVPS 523
+ K+A +P+
Sbjct: 1492 AMKKATLPT 1500
Score = 42 (19.8 bits), Expect = 1.8e-07, Sum P(4) = 1.8e-07
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 405 PSLNQDSKKEALNLTDKMLADPTS 428
P L++ S ++ L D A+P S
Sbjct: 602 PKLSRSSSSQSQRLKDSQAAEPES 625
Score = 40 (19.1 bits), Expect = 1.8e-07, Sum P(4) = 1.8e-07
Identities = 9/37 (24%), Positives = 20/37 (54%)
Query: 298 TSNGTAASRNEDSVVKDKLSNVLERCSQVERSQSIDA 334
++ G+ S NE+ + LS++L + R +++A
Sbjct: 456 SAGGSGLSDNEEQTLITHLSSMLRDADERVRLAAVEA 492
>RGD|1310838 [details] [associations]
symbol:Pds5b "PDS5, regulator of cohesion maintenance, homolog B
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000785
"chromatin" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=ISO;ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISO;IDA] [GO:0042127 "regulation of
cell proliferation" evidence=ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR016024 InterPro:IPR017956 SMART:SM00384 RGD:1310838
GO:GO:0005634 GO:GO:0008285 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301 GO:GO:0003677
GO:GO:0007064 HOVERGEN:HBG108241 eggNOG:NOG268017
HOGENOM:HOG000230672 EMBL:AABR03082233 EMBL:AABR03082545
EMBL:AY388627 EMBL:AY820182 EMBL:AY820183 EMBL:AY831451
EMBL:AY831452 EMBL:AY836673 IPI:IPI00515846 IPI:IPI00562353
IPI:IPI00764370 UniGene:Rn.105768 ProteinModelPortal:Q6TRW4
STRING:Q6TRW4 PhosphoSite:Q6TRW4 PRIDE:Q6TRW4 UCSC:RGD:1310838
ArrayExpress:Q6TRW4 Genevestigator:Q6TRW4 Uniprot:Q6TRW4
Length = 1447
Score = 186 (70.5 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 53/228 (23%), Positives = 112/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E +++ ++++ VI + H V M +M+ +I E + VS +LL +L ++ +
Sbjct: 148 EDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHV 255
Score = 52 (23.4 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 22/103 (21%), Positives = 48/103 (46%)
Query: 834 GATINKPINA----DESKADLPEKESNPKGDDQ-NSPAKLI--LKDRKLIFTLNKQ--QQ 884
GA +NKP+++ ++K+ E SN +SP ++ L ++ + N+
Sbjct: 1132 GA-VNKPLSSAGKQSQTKSSRMETVSNASSSSNPSSPGRIKGRLDSTEMDHSENEDYTMS 1190
Query: 885 AVFKGERHNARDGESAVDNPVERSKEAVKGSSSNDFGTIVMDD 927
+ G++ + R+ V + +E+ + K S ++ + MDD
Sbjct: 1191 SPLPGKKSDKREDSDLVRSELEKPRSRKKASVTDPEEKLGMDD 1233
Score = 52 (23.4 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 56/290 (19%), Positives = 105/290 (36%)
Query: 332 IDAKCSAGPDTSDSLRNVKSETEPESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVP 391
+ A+ PD + S N K+ PE KP + N + S+G++
Sbjct: 1093 LPARFFTQPDKNFS--NTKNYLPPEMKSFFTPGKPKTA-NVLGAVNKPLSSAGKQSQTKS 1149
Query: 392 GRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLADPTSASLKSGLPDGSHHRRGRTKKQGS 451
R ++ S + K L+ T+ ++ ++ S LP +R + S
Sbjct: 1150 SRMETVSNASSSSNPSSPGRIKGRLDSTEMDHSENEDYTMSSPLPGKKSDKREDSDLVRS 1209
Query: 452 TVNQNADHNSLSVSLSTRVEETASGSADFS-LRKKPEDRSDTEIKHRKRSKTNEEISQPP 510
+ + SV T EE G D S L ++ + + + R + + E Q P
Sbjct: 1210 ELEKPRSRKKASV---TDPEEKL-GMDDLSKLVQEQKPKGSQRGRKRGHAASESEEQQWP 1265
Query: 511 GYGVSEKEAVVPSADKEKPLQLSVTKKRRRSLVVA-ISAQNISEAXXXXXXXXXXXXXXX 569
KE ++ + D++ S KK +R + + E
Sbjct: 1266 EEK-RHKEELLGNEDEQN----SPPKKGKRGRPPKPLGGTSKEEPVVKTSKKGNKKKPAP 1320
Query: 570 PNIDENYSEDTPKTEIKRKHTSGKEEKKMISKARAKSSDRDGSHSKE-TP 618
P +DE+ E+ ++K S ++ ++ RA+S + S + TP
Sbjct: 1321 PVVDEDEEEERQMGNTEQKSKSKQQRTSKRAQQRAESPETSAVESTQSTP 1370
>UNIPROTKB|Q6TRW4 [details] [associations]
symbol:Pds5b "Sister chromatid cohesion protein PDS5
homolog B" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR016024 InterPro:IPR017956
SMART:SM00384 RGD:1310838 GO:GO:0005634 GO:GO:0008285
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0003677 GO:GO:0007064
HOVERGEN:HBG108241 eggNOG:NOG268017 HOGENOM:HOG000230672
EMBL:AABR03082233 EMBL:AABR03082545 EMBL:AY388627 EMBL:AY820182
EMBL:AY820183 EMBL:AY831451 EMBL:AY831452 EMBL:AY836673
IPI:IPI00515846 IPI:IPI00562353 IPI:IPI00764370 UniGene:Rn.105768
ProteinModelPortal:Q6TRW4 STRING:Q6TRW4 PhosphoSite:Q6TRW4
PRIDE:Q6TRW4 UCSC:RGD:1310838 ArrayExpress:Q6TRW4
Genevestigator:Q6TRW4 Uniprot:Q6TRW4
Length = 1447
Score = 186 (70.5 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 53/228 (23%), Positives = 112/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E +++ ++++ VI + H V M +M+ +I E + VS +LL +L ++ +
Sbjct: 148 EDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHV 255
Score = 52 (23.4 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 22/103 (21%), Positives = 48/103 (46%)
Query: 834 GATINKPINA----DESKADLPEKESNPKGDDQ-NSPAKLI--LKDRKLIFTLNKQ--QQ 884
GA +NKP+++ ++K+ E SN +SP ++ L ++ + N+
Sbjct: 1132 GA-VNKPLSSAGKQSQTKSSRMETVSNASSSSNPSSPGRIKGRLDSTEMDHSENEDYTMS 1190
Query: 885 AVFKGERHNARDGESAVDNPVERSKEAVKGSSSNDFGTIVMDD 927
+ G++ + R+ V + +E+ + K S ++ + MDD
Sbjct: 1191 SPLPGKKSDKREDSDLVRSELEKPRSRKKASVTDPEEKLGMDD 1233
Score = 52 (23.4 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 56/290 (19%), Positives = 105/290 (36%)
Query: 332 IDAKCSAGPDTSDSLRNVKSETEPESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVP 391
+ A+ PD + S N K+ PE KP + N + S+G++
Sbjct: 1093 LPARFFTQPDKNFS--NTKNYLPPEMKSFFTPGKPKTA-NVLGAVNKPLSSAGKQSQTKS 1149
Query: 392 GRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLADPTSASLKSGLPDGSHHRRGRTKKQGS 451
R ++ S + K L+ T+ ++ ++ S LP +R + S
Sbjct: 1150 SRMETVSNASSSSNPSSPGRIKGRLDSTEMDHSENEDYTMSSPLPGKKSDKREDSDLVRS 1209
Query: 452 TVNQNADHNSLSVSLSTRVEETASGSADFS-LRKKPEDRSDTEIKHRKRSKTNEEISQPP 510
+ + SV T EE G D S L ++ + + + R + + E Q P
Sbjct: 1210 ELEKPRSRKKASV---TDPEEKL-GMDDLSKLVQEQKPKGSQRGRKRGHAASESEEQQWP 1265
Query: 511 GYGVSEKEAVVPSADKEKPLQLSVTKKRRRSLVVA-ISAQNISEAXXXXXXXXXXXXXXX 569
KE ++ + D++ S KK +R + + E
Sbjct: 1266 EEK-RHKEELLGNEDEQN----SPPKKGKRGRPPKPLGGTSKEEPVVKTSKKGNKKKPAP 1320
Query: 570 PNIDENYSEDTPKTEIKRKHTSGKEEKKMISKARAKSSDRDGSHSKE-TP 618
P +DE+ E+ ++K S ++ ++ RA+S + S + TP
Sbjct: 1321 PVVDEDEEEERQMGNTEQKSKSKQQRTSKRAQQRAESPETSAVESTQSTP 1370
>UNIPROTKB|F1P3B8 [details] [associations]
symbol:PDS5B "Sister chromatid cohesion protein PDS5
homolog B" species:9031 "Gallus gallus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] InterPro:IPR016024 GO:GO:0008285
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000785
GO:GO:0007064 KO:K11267 GeneTree:ENSGT00390000012488
IPI:IPI00592195 UniGene:Gga.33882 CTD:23047 OMA:AKKGPPR
EMBL:AC147444 RefSeq:NP_001012845.2 Ensembl:ENSGALT00000027571
GeneID:418910 KEGG:gga:418910 NextBio:20822038 ArrayExpress:F1P3B8
Uniprot:F1P3B8
Length = 1446
Score = 186 (70.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 53/228 (23%), Positives = 112/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E +++ ++++ VI + H V M +M+ +I E + VS +LL +L ++ +
Sbjct: 148 EDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHV 255
Score = 48 (22.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 60/290 (20%), Positives = 108/290 (37%)
Query: 337 SAGPDT-SDSLR-NVKSETEPESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRR 394
SAG + S S R S S P GR L + E DHS + +PG++
Sbjct: 1140 SAGKQSQSKSSRMETVSNASSSSNPSSPGRIKGRLDSTE--MDHSENEDFTLSSPLPGKK 1197
Query: 395 --KSDDKGVDCSPSLNQDSKKEALNLTDKMLA-DPTSASLKSGLPDGSHHRRGRTKKQGS 451
K DD + + KK A+ +++ L+ D + + GS +RGR K+ +
Sbjct: 1198 TDKRDDSDLS-ELEKPRGRKKPAITDSEEKLSIDDLNKLGQDQKLRGS--QRGR--KRPA 1252
Query: 452 TVNQNADHNSLSVSLSTRVEETASGSADFSLRKKPEDRSDTEIKHRKRSKTNEEISQPPG 511
V+++ + T+ +E D + ED ++ K +R + +P
Sbjct: 1253 VVSESDE---------TQWQEEKRLKEDVI---ESEDEQNSPPKKGRRGRP----PKPNN 1296
Query: 512 YGVSEKEAVVPSADKEKPLQLSVTKKRRRSLVVAISAQNISEAXXXXXXXXXXXXXXXPN 571
G ++E S+ + K Q S +NI +
Sbjct: 1297 GGTPKEEPAAKSSKRSKKKQTSAAAVEEEEEEEERQTENIEQKPKGRQNRSTKRTQQRAE 1356
Query: 572 IDENYS-EDTPKTEIKRKHTSGK---EEKKMISKARAK-SSDRDGSHSKE 616
E+ + E T R+ S K ++K + R+K ++ ++ S+E
Sbjct: 1357 PSESSTVESAQSTPQNRRGRSSKTPPSQQKKVRAGRSKQAASKENESSEE 1406
Score = 44 (20.5 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 72/352 (20%), Positives = 124/352 (35%)
Query: 290 VDGISKSVTSNGTA-ASRNEDS-VVKDKLSNVLERCSQVERSQS-----IDAKCSAGPDT 342
V+ I ++ + G A NE V D N++ S +S + A+ PD
Sbjct: 1044 VENIKQTKDAQGPDDAKMNEKLYTVCDVAMNIIMSKSTTYSLESPKDPVLPARYFTQPDK 1103
Query: 343 SDSLRNVKSETEPESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVD 402
+ S N K+ PE KP + N + S+G++ R ++
Sbjct: 1104 NFS--NTKNYLPPEMKSFFTPGKPKAA-NVLGAVNKPLSSAGKQSQSKSSRMETVSNASS 1160
Query: 403 CSPSLNQDSKKEALNLTDKMLADPTSASLKSGLPDGSHHRRGRT------KKQGSTVNQN 456
S + K L+ T+ ++ +L S LP +R + K +G
Sbjct: 1161 SSNPSSPGRIKGRLDSTEMDHSENEDFTLSSPLPGKKTDKRDDSDLSELEKPRGRKKPAI 1220
Query: 457 AD-HNSLSVSLSTRVEETASGSADFSLRKKP---EDRSDTEIKHRKRSK-----TNEEIS 507
D LS+ ++ + RK+P + +T+ + KR K + +E +
Sbjct: 1221 TDSEEKLSIDDLNKLGQDQKLRGSQRGRKRPAVVSESDETQWQEEKRLKEDVIESEDEQN 1280
Query: 508 QPPGYGVSEKEAVVPSADKE-KPLQLSVTKKRRRSLVVAISAQNISEAXXXXXXXXXXXX 566
PP G + P + P + K +RS SA + E
Sbjct: 1281 SPPKKG---RRGRPPKPNNGGTPKEEPAAKSSKRSKKKQTSAAAVEEEEEEEERQTENIE 1337
Query: 567 XXXPNIDENYSEDTPKTEIKRKHTSGKEEKKMISKARAKSSDRDGSHSKETP 618
P +N S T +T+ +R S E + A++ +R G SK P
Sbjct: 1338 QK-PKGRQNRS--TKRTQ-QRAEPS---ESSTVESAQSTPQNRRGRSSKTPP 1382
>MGI|MGI:2140945 [details] [associations]
symbol:Pds5b "PDS5, regulator of cohesion maintenance,
homolog B (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000785
"chromatin" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=ISO] [GO:0007067 "mitosis" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR016024
InterPro:IPR017956 SMART:SM00384 MGI:MGI:2140945 GO:GO:0005634
GO:GO:0008285 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0003677 GO:GO:0000785
GO:GO:0007064 HOVERGEN:HBG108241 KO:K11267 eggNOG:NOG268017
OrthoDB:EOG46T30N GeneTree:ENSGT00390000012488 CTD:23047
EMBL:AY102267 EMBL:AK041682 EMBL:AK045159 EMBL:AK048706
EMBL:AK164853 EMBL:BC096539 EMBL:AK122414 IPI:IPI00317401
IPI:IPI00776026 IPI:IPI00845638 RefSeq:NP_780519.3 UniGene:Mm.32959
ProteinModelPortal:Q4VA53 SMR:Q4VA53 STRING:Q4VA53
PhosphoSite:Q4VA53 PaxDb:Q4VA53 PRIDE:Q4VA53
Ensembl:ENSMUST00000016569 Ensembl:ENSMUST00000110486 GeneID:100710
KEGG:mmu:100710 UCSC:uc009auh.1 UCSC:uc009aui.1 UCSC:uc009auj.1
InParanoid:Q4VA53 NextBio:354602 Bgee:Q4VA53 Genevestigator:Q4VA53
Uniprot:Q4VA53
Length = 1446
Score = 186 (70.5 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 53/228 (23%), Positives = 112/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E +++ ++++ VI + H V M +M+ +I E + VS +LL +L ++ +
Sbjct: 148 EDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHV 255
Score = 44 (20.5 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 16/47 (34%), Positives = 19/47 (40%)
Query: 821 KPKAKQSGGGSPAGATINKPINADESKADLPEKESNPKGDDQNSPAK 867
KPK Q G A+ + E K E N D+QNSP K
Sbjct: 1240 KPKGSQRGRKRGRTASDSDEQQWPEEKRHKEELLENE--DEQNSPPK 1284
Score = 40 (19.1 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 765 KGGSSAEEQETDVLKPDG--SSDILPKGKEEIEFELVNEVKASALKR 809
K S+EE DVL+ S D +G EE + + N V+ + KR
Sbjct: 1400 KENDSSEEM--DVLQASSPVSDDTTQEGAEEEDISVGN-VRRRSSKR 1443
>CGD|CAL0006191 [details] [associations]
symbol:PDS5 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0030892 "mitotic cohesin complex"
evidence=IEA] [GO:0007129 "synapsis" evidence=IEA] [GO:0051455
"attachment of spindle microtubules to kinetochore involved in
homologous chromosome segregation" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:2000817 "regulation
of histone H3-T3 phosphorylation involved in chromosome passenger
complex localization to kinetochore" evidence=IEA] [GO:0007064
"mitotic sister chromatid cohesion" evidence=IEA]
InterPro:IPR016024 CGD:CAL0006191 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AACQ01000076 EMBL:AACQ01000075 KO:K11267
eggNOG:NOG268017 RefSeq:XP_715997.1 RefSeq:XP_716056.1
STRING:Q5A2J0 GeneID:3642341 GeneID:3642402 KEGG:cal:CaO19.2216
KEGG:cal:CaO19.9761 Uniprot:Q5A2J0
Length = 1303
Score = 174 (66.3 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 46/172 (26%), Positives = 91/172 (52%)
Query: 30 EVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEIT 89
E+IN L + L+N++ + S+ + T L+ LL + M V+ + C+S+I
Sbjct: 35 ELINRLIALHDELSNIDDS---SVNLSNYTT--DLVNKKLLSHTSMGVQAYLCCCLSDIL 89
Query: 90 RITAPDSPYDDELMKEFFQLAVSAFENLS-HASGRYYMKALSILDTVAKVRSCLLMLDL- 147
RI AP++PY D+ + + F+L F LS +Y + + +L +A+ +S +++ DL
Sbjct: 90 RIYAPNAPYSDQQLSDVFKLFFKQFSRLSAKKDDPFYQQHVYLLKRLAEAKSTIIITDLP 149
Query: 148 ECDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILL 199
+ + L+V +F F + P + + I++ V+ E+E V +L+++L
Sbjct: 150 DSESLIVSIFTTFYNLAAKGFPVELETIITDILSEVLSEAEVVPHQILQLIL 201
Score = 42 (19.8 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 303 AASRNEDSVVKDKLSNVLERCSQVERSQSIDAKCSAGPDTSDSL 346
A ++ + + K LS +E +S +++ K ++G D S+ +
Sbjct: 544 AINKRQQQISK-VLSTYIELSEAYNKSNTLENKDNSGTDDSNEI 586
>UNIPROTKB|Q5A2J0 [details] [associations]
symbol:PDS5 "Putative uncharacterized protein PDS5"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR016024 CGD:CAL0006191
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AACQ01000076 EMBL:AACQ01000075 KO:K11267 eggNOG:NOG268017
RefSeq:XP_715997.1 RefSeq:XP_716056.1 STRING:Q5A2J0 GeneID:3642341
GeneID:3642402 KEGG:cal:CaO19.2216 KEGG:cal:CaO19.9761
Uniprot:Q5A2J0
Length = 1303
Score = 174 (66.3 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 46/172 (26%), Positives = 91/172 (52%)
Query: 30 EVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEIT 89
E+IN L + L+N++ + S+ + T L+ LL + M V+ + C+S+I
Sbjct: 35 ELINRLIALHDELSNIDDS---SVNLSNYTT--DLVNKKLLSHTSMGVQAYLCCCLSDIL 89
Query: 90 RITAPDSPYDDELMKEFFQLAVSAFENLS-HASGRYYMKALSILDTVAKVRSCLLMLDL- 147
RI AP++PY D+ + + F+L F LS +Y + + +L +A+ +S +++ DL
Sbjct: 90 RIYAPNAPYSDQQLSDVFKLFFKQFSRLSAKKDDPFYQQHVYLLKRLAEAKSTIIITDLP 149
Query: 148 ECDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILL 199
+ + L+V +F F + P + + I++ V+ E+E V +L+++L
Sbjct: 150 DSESLIVSIFTTFYNLAAKGFPVELETIITDILSEVLSEAEVVPHQILQLIL 201
Score = 42 (19.8 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 303 AASRNEDSVVKDKLSNVLERCSQVERSQSIDAKCSAGPDTSDSL 346
A ++ + + K LS +E +S +++ K ++G D S+ +
Sbjct: 544 AINKRQQQISK-VLSTYIELSEAYNKSNTLENKDNSGTDDSNEI 586
>TAIR|locus:2125682 [details] [associations]
symbol:AT4G32620 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0010050 "vegetative phase change"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA]
InterPro:IPR002999 EMBL:CP002687 SMART:SM00333 InterPro:IPR019542
Pfam:PF10513 UniGene:At.46639 IPI:IPI00539967 RefSeq:NP_001154281.1
UniGene:At.31652 PRIDE:F4JV27 EnsemblPlants:AT4G32620.2
GeneID:829397 KEGG:ath:AT4G32620 OMA:HHVKYDD Uniprot:F4JV27
Length = 1540
Score = 147 (56.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 43/128 (33%), Positives = 67/128 (52%)
Query: 712 LVGSRIKVWWPMDETFYKGVVDNYDPIKKKHRILYADGDEEILNLKKERWEL------IK 765
L+ +IKV+WP+DE +Y G VD +D K H + Y D DEE +NL+ ER+++ +
Sbjct: 355 LLNKKIKVFWPLDERWYHGFVDGFDGDKNLHHVKYDDRDEEWINLQGERFKILLFPSEVP 414
Query: 766 GGSS-----AEEQETDVLKP-DGSSDILPKGKEEIEFELVNEVKASALKRWISRSTPASA 819
G + +E + T +K D SS K KE++E + E + + W++RS
Sbjct: 415 GKNQRKRRCSESKSTQKVKGNDTSSKDEEKQKEKLEDDSCME--SEPIITWLARSRHRDK 472
Query: 820 SKP-KAKQ 826
S KA Q
Sbjct: 473 SSTLKAVQ 480
Score = 57 (25.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 40/165 (24%), Positives = 73/165 (44%)
Query: 308 EDSVVKDKLSNVLERCSQVERSQSIDA---KCSAGPDTSDSLRNVKSETEPESAPRKRGR 364
E+S V+D+ S V E+ S + +S A + G +++ + + R R
Sbjct: 164 EESSVQDQPSKVEEKDSDKDIKESNSAAPLQLENGHSNQSPVKDDQLVVVKQRNSNSRKR 223
Query: 365 KPNSLMNPEEGYD--HSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQDSKKEALNLT--- 419
K +S N G + S +SGR I+KV R+ D++ ++ + ++ S+ + N T
Sbjct: 224 K-SSASNRRVGKEAKSSGDASGR-ISKVS--REDDEENLEANAAIMLSSRFDP-NCTQFP 278
Query: 420 -DKMLADPTSASLKSGLPDGSHHRRGRTKKQGST-VNQNADHNSL 462
+ + SAS LP G + R++ S V+ + D L
Sbjct: 279 SNSVTPGSPSASRLHPLPSGKNSVDPRSELLSSKCVSDDTDDRML 323
Score = 45 (20.9 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 577 SEDTPKTEIKRKHTSG------KEEKKMISKARAKSSDRDGSHSK 615
S+D+ KRKH SG K++KK S + GS ++
Sbjct: 31 SKDSVNKSFKRKHRSGIDGDQLKQDKKSRKVVSLSSFKKVGSQNE 75
>TAIR|locus:2132233 [details] [associations]
symbol:MSH6 "AT4G02070" species:3702 "Arabidopsis
thaliana" [GO:0000228 "nuclear chromosome" evidence=IBA]
[GO:0000400 "four-way junction DNA binding" evidence=IBA]
[GO:0000710 "meiotic mismatch repair" evidence=IBA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IEA;ISS]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IBA]
[GO:0009411 "response to UV" evidence=IBA] [GO:0032137
"guanine/thymine mispair binding" evidence=IBA] [GO:0032138 "single
base insertion or deletion binding" evidence=IBA] [GO:0032301
"MutSalpha complex" evidence=IBA] [GO:0043570 "maintenance of DNA
repeat elements" evidence=IBA] [GO:0045910 "negative regulation of
DNA recombination" evidence=IBA] [GO:0003684 "damaged DNA binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006290 "pyrimidine dimer repair" evidence=IMP] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006270 "DNA
replication initiation" evidence=RCA] [GO:0006275 "regulation of
DNA replication" evidence=RCA] [GO:0048451 "petal formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA]
InterPro:IPR000432 InterPro:IPR007695 InterPro:IPR007696
InterPro:IPR007860 InterPro:IPR007861 InterPro:IPR016151
Pfam:PF00488 Pfam:PF01624 Pfam:PF05188 Pfam:PF05190 Pfam:PF05192
PROSITE:PS00486 SMART:SM00533 SMART:SM00534 InterPro:IPR002999
GO:GO:0005524 GO:GO:0009411 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003684 EMBL:AL161493 SMART:SM00333 GO:GO:0007131
GO:GO:0000228 GO:GO:0043570 GO:GO:0045910 GO:GO:0008094
GO:GO:0006290 EMBL:AF001308 eggNOG:COG0249 SUPFAM:SSF48334
GO:GO:0000400 GO:GO:0032137 GO:GO:0000710 GO:GO:0032301
GO:GO:0032138 Gene3D:3.40.1170.10 SUPFAM:SSF55271 SUPFAM:SSF53150
EMBL:AF001535 EMBL:AJ245967 IPI:IPI00528681 PIR:T01508
RefSeq:NP_192116.1 UniGene:At.34340 ProteinModelPortal:O04716
SMR:O04716 STRING:O04716 PaxDb:O04716 PRIDE:O04716
EnsemblPlants:AT4G02070.1 GeneID:828147 KEGG:ath:AT4G02070
TAIR:At4g02070 HOGENOM:HOG000243127 InParanoid:O04716 KO:K08737
OMA:YHMDAVI PhylomeDB:O04716 ProtClustDB:CLSN2685718
ArrayExpress:O04716 Genevestigator:O04716 GermOnline:AT4G02070
InterPro:IPR017261 InterPro:IPR015536 PANTHER:PTHR11361:SF31
PIRSF:PIRSF037677 Uniprot:O04716
Length = 1324
Score = 144 (55.7 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 32/97 (32%), Positives = 56/97 (57%)
Query: 710 EQLVGSRIKVWWPMDETFYKGVVDNYDPIKKKHRILYADGDEEILNLKKERWELIKGGSS 769
+++VG +++V+WP+D+ +Y G V YD + KH + Y DG+EE L+L KE+ E + G S
Sbjct: 122 DEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGKEKTEWVVGEKS 181
Query: 770 AEEQETDVLKPDGSS--DILPKGKEEIEFELVNEVKA 804
+ LK S+ ++ +++E V E K+
Sbjct: 182 GDRFNR--LKRGASALRKVVTDSDDDVEMGNVEEDKS 216
>FB|FBgn0037836 [details] [associations]
symbol:CG14692 species:7227 "Drosophila melanogaster"
[GO:0008603 "cAMP-dependent protein kinase regulator activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0032027 "myosin light chain binding" evidence=RCA]
InterPro:IPR000048 InterPro:IPR003117 Pfam:PF00612 Pfam:PF02197
PROSITE:PS50096 SMART:SM00015 SMART:SM00394 EMBL:AE014297
GO:GO:0007165 GO:GO:0008603 eggNOG:NOG12793 SUPFAM:SSF47391
RefSeq:NP_650019.4 ProteinModelPortal:Q9VGW4 SMR:Q9VGW4
IntAct:Q9VGW4 MINT:MINT-328162 GeneID:41298 KEGG:dme:Dmel_CG14692
UCSC:CG14692-RB FlyBase:FBgn0037836 InParanoid:Q9VGW4
OrthoDB:EOG4B8GTZ GenomeRNAi:41298 NextBio:823185 Bgee:Q9VGW4
Uniprot:Q9VGW4
Length = 2743
Score = 146 (56.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 98/425 (23%), Positives = 162/425 (38%)
Query: 199 LASVRKENQDVSPTSWKLGEKVFTKCAAKLKTNLKEAVQSRGIALDDYAEIVACICGSDD 258
L S + EN + +L + VF + K E++ + + ++ G +D
Sbjct: 998 LDSDQVENMKLEGEIGQL-KTVFEQSEEKTSPTKSESLHAEDRKISGKSKESLEDAGEND 1056
Query: 259 ENPQHGHLIGSENQLATKEPDPPCLGEVVHDVDGISKSVTSNGTAASRNEDSVVKDKLSN 318
+ +L SE + +T + P + +D S T T+ S K+K ++
Sbjct: 1057 RSTLLENLPSSEKENSTSLDENPLPEKESTSLDEKPSSGTEKSTSLDEKSSSE-KEKSTS 1115
Query: 319 VLER-CSQVERSQSIDAKCSAGPDTSDSLRNVKSETEPESAPRKRGRKPNSLMNPEEGYD 377
+ E+ S+ E+S S+D S+ + S SL S PE KP+S D
Sbjct: 1116 LDEKPSSEKEKSTSLDETPSSEKENSTSLDEKPS---PEKESTSLDEKPSSGTEKSTSLD 1172
Query: 378 HSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLADPTSASLKSGLPD 437
S K + + S +K + S SLN+ E N T ++ +P+ + L +
Sbjct: 1173 EKSSSEKEKSTSLD-EKPSSEK--EKSTSLNERPSSEKENSTS-LVENPSPEKESTSLDE 1228
Query: 438 GSHHRRGRTKKQGSTVNQNADHNSLSVSLSTRVEETASGSADFSLRKKPEDRSDTEIKHR 497
G T+K S + S SL+ R S + E T +
Sbjct: 1229 KPSS--G-TEKSTSLDENPSSEKEKSTSLNERPSSEKENSTSQDEKPSSETEKSTSLDE- 1284
Query: 498 KRSKTNEEISQPPGYGVSEKEAVV-----PSADKEKPLQL----SVTKKRRRSLVVAISA 548
K S E+ + G SEKE PS++KEK L S K+ SLV S
Sbjct: 1285 KPSSEKEKSTSLDGKPSSEKEKSTSLDENPSSEKEKSTSLNERPSSEKENSTSLVENPSP 1344
Query: 549 QNISEAXXXXXXXXXXXXXXXPNIDENYSEDTPK-TEIKRKHTSGKEEKKMISKARAKSS 607
+ S + ++DEN S + K T + + +S KE S+ SS
Sbjct: 1345 EKESTSLDEKPSSGTEKST---SLDENPSSEKEKSTSLNERPSSEKENST--SQDEKPSS 1399
Query: 608 DRDGS 612
+++ S
Sbjct: 1400 EKEKS 1404
Score = 56 (24.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 740 KKHRILYADGDEEILNLKKERWELIKGGSSAEEQETDVLKPDGSSDILPKGKEEIEFELV 799
K+ + L +DG +EI NL + S +E + L+ + K EE++ EL
Sbjct: 2052 KRVKELKSDGFQEIENLSNANFNPKSSTKSPDEIDLQPLEQAQKLVEIEKPSEEMKTELT 2111
Query: 800 NEVKAS 805
N +AS
Sbjct: 2112 NLSQAS 2117
Score = 53 (23.7 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 19/77 (24%), Positives = 32/77 (41%)
Query: 784 SDILPKGKEEIEFELVNEVKASALKRWISRSTPASASKPKAKQSGGGSPAGATINKPINA 843
SD+ K KE E + +++ + + P ASK + TI+ PIN
Sbjct: 1987 SDLTEKHKETNEMHKKGSQELASVSAEVEK--PMDASKLPTENRRDEKQVVETISPPINL 2044
Query: 844 DESKADLPEKESNPKGD 860
+ A+ P++ K D
Sbjct: 2045 TQLSAE-PKRVKELKSD 2060
>DICTYBASE|DDB_G0275929 [details] [associations]
symbol:pds5 "sister chromatid cohesion protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008156 "negative regulation of DNA replication" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR016024 dictyBase:DDB_G0275929
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0051301 GO:GO:0007067 GenomeReviews:CM000151_GR
EMBL:AAFI02000013 GO:GO:0008156 KO:K11267 eggNOG:NOG268017
RefSeq:XP_643624.1 EnsemblProtists:DDB0305112 GeneID:8620211
KEGG:ddi:DDB_G0275929 InParanoid:Q552Q7 OMA:NMIARRI
ProtClustDB:CLSZ2430964 Uniprot:Q552Q7
Length = 1450
Score = 130 (50.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 66/304 (21%), Positives = 124/304 (40%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+++I L K++ L Q R + L ++ LI ++RL + C+SEI
Sbjct: 172 EKIIKRLKKLDEYL----QDKKRGNTEGLEIVLEVLIDPKFADNKIFEIRLMTSCCLSEI 227
Query: 89 TRITAPDSPYDDELMKEFFQLAVSAFENLSHASGRYYMKALSILD--TVAKVRSCLLMLD 146
RI AP P+D ++K F+L + + + +L+ +V KV + L ++D
Sbjct: 228 FRIYAPTLPFDMVVLKVVFKLFTEQVLQGDKVDKKLFPQYFQMLERLSVIKVFALLALVD 287
Query: 147 LECDKLVVEMFQHFLKVIRSNHPHFVFAAM-ETIMTLVIDESEDVSWDLLRILLASVRKE 205
++ F+ L + + H M T++ +++ E+V L LL S+ +
Sbjct: 288 ---SSMLTPFFKDCLSRVHGDKEHQPMDIMFSTLLNTILESLEEVPTSLWNELLESLIER 344
Query: 206 NQDVSPTSWKLGEKVFTKCAAKLKTNLKEAVQSRGIALDDYAEIVACICGSDDENPQHGH 265
+ PTS + +FT ++TN + + L D E + G + Q
Sbjct: 345 EKGGVPTS----KAIFTHDL--IETNSRFLQVHFDLFLQDLLE-PEILAGGQQQQQQDSS 397
Query: 266 LI--GSENQLATKEPDPPCLGEVVHDVDGISKSVTSNGTAASRNEDSVVKDKLSNVLERC 323
L G QL K+ + L E+ + + N + ++ ++ + VL RC
Sbjct: 398 LSNNGISKQLKKKKNE--ILFEMFNILPEFIYPALQNLEFDLEDVNASIRKGAAIVLSRC 455
Query: 324 SQVE 327
E
Sbjct: 456 YSTE 459
Score = 63 (27.2 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 33/126 (26%), Positives = 59/126 (46%)
Query: 420 DKMLADP--TSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVSLSTRVEETASGS 477
D+M D TS L S LP +R + S +QN ++N+ + + ST +E+
Sbjct: 1317 DEMSIDDEVTSIKLPSLLP-----KRFKLPPLPSITDQNNNNNNNNTN-STNNDESEK-- 1368
Query: 478 ADFSLRKKPEDRSDTEIKHRKRSKTNEE--ISQPPGYGVSEKEAVVPSADKEKPLQLSVT 535
D + K ++ +D + + ++ IS+PP VS+K A + K+K
Sbjct: 1369 -DENNNNKNDNDNDNDNDDNSTTAVPQKSIISKPPAKKVSKKAAAKQKSPKKK-----TN 1422
Query: 536 KKRRRS 541
KK+++S
Sbjct: 1423 KKKKQS 1428
Score = 51 (23.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 17/104 (16%), Positives = 39/104 (37%)
Query: 417 NLTDKMLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVSLSTRVEETASG 476
++TD+ + + + + + K N N D+++ +V + + + +
Sbjct: 1345 SITDQNNNNNNNNTNSTNNDESEKDENNNNKNDNDNDNDNDDNSTTAVPQKSIISKPPAK 1404
Query: 477 SADFSLRKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAV 520
K + K +K+S + EE+S S+ E V
Sbjct: 1405 KVSKKAAAKQKSPKKKTNKKKKQSSSEEEVSSSEEEDESQDEEV 1448
>UNIPROTKB|E1C4G3 [details] [associations]
symbol:E1C4G3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001878 InterPro:IPR014891
Pfam:PF00098 Pfam:PF08783 PROSITE:PS50089 PROSITE:PS50158
PROSITE:PS51282 SMART:SM00184 SMART:SM00343 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0042787 GeneTree:ENSGT00610000086096 OMA:RIRIGLK
EMBL:AADN02023635 IPI:IPI00572670 Ensembl:ENSGALT00000009734
Uniprot:E1C4G3
Length = 922
Score = 113 (44.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 78/338 (23%), Positives = 135/338 (39%)
Query: 273 LATKEPDPPCLGEV-VHDVDGISKSVTSNGTAASRNEDSVVKDKLSNVL-ERCSQVERSQ 330
++ K P+P E + ++ I K+ +S+++ VK S+VL E+ ER
Sbjct: 513 VSAKAPNPIKHNEKEMEPLEKIQKTTKEVSYESSQHD---VKGSKSSVLNEKGKTKERDH 569
Query: 331 SIDAKCSAGPDTSDSLRN-VKSETEPESAPRKRGRKPNSLMNPEEGYDHSWISSGR-KIA 388
S+ K DTS+ ++ V+ E + ++G N + ++ +GR A
Sbjct: 570 SLSDK-----DTSEKRKSGVQPEKDHSERATEQGNGKNISQSSKDSRSSEKHDTGRGSTA 624
Query: 389 K--VPGR-RKSD-DKGVDCSPSLNQDSKKEALNLTDKMLADPTSASLKSGLPDGSHHRRG 444
K P R +KSD D + S S +D K E D + S S + P R
Sbjct: 625 KDFTPNRDKKSDHDSSREHSSSKRRDEKSELARRKDSPSRNRESTSGQKSKP---RDERA 681
Query: 445 RTKKQGSTVNQNADHNSLSVSLSTRVEETASGSADFSLRKKPEDRSDTEIKHRKRSKTNE 504
K+G+ ++ + + S S +TA S KP D++ + K +++ K+N+
Sbjct: 682 EPSKKGAGDSKRSSY-SPSRDRKQSDHKTAHDSKRSLEEHKPLDKNSGKEKEKEKIKSNK 740
Query: 505 EISQPPGYGVSEKEAVVPSADKEKPLQLSVTKKRRRSLVVAISAQNISEAXXXXXXXXXX 564
E S +E+ P A EK +VT + ++ V +
Sbjct: 741 EKEPSCNKPSSIQES--PDAKNEKE---NVTGQNDKTGVKTKPQVSNPSRLSSDPTRETD 795
Query: 565 XXXXXPNIDENYSEDTPKTEIKRKHTSGKEEKKMISKA 602
P+ +E+ SE K + T GK K+ KA
Sbjct: 796 EAAFVPDYNESDSESN--VSAKDEETVGKNCKEQKEKA 831
Score = 68 (29.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 25/101 (24%), Positives = 48/101 (47%)
Query: 776 DVLKPDGSSDILPKGKEEIEFELVNEVKASALKRWISRST--PASASKPKAKQSGGGSPA 833
D + D S++ K +E + + E K A+ + + + T PA+ S+P+A +S S
Sbjct: 802 DYNESDSESNVSAKDEETVG-KNCKEQKEKAIDK-VKQDTAAPATVSQPEASRSQSQSSP 859
Query: 834 GATINKPINADESKADLPEKESNPKGDDQNSPAKLILKDRK 874
+ ++ + ES+ S G+ Q+S K K++K
Sbjct: 860 SVSRSRSQSPAESQTR-SHSSSASSGESQDSKKKKKKKEKK 899
>FB|FBgn0053526 [details] [associations]
symbol:PNUTS "PNUTS" species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;NAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0035304 "regulation of protein dephosphorylation"
evidence=ISS;NAS] [GO:0019888 "protein phosphatase regulator
activity" evidence=ISS;NAS] [GO:0050790 "regulation of catalytic
activity" evidence=ISS] [GO:0006605 "protein targeting"
evidence=ISS] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0008157 "protein phosphatase 1 binding" evidence=IPI]
InterPro:IPR000571 InterPro:IPR017923 PROSITE:PS50103
PROSITE:PS51319 SMART:SM00356 GO:GO:0005634 GO:GO:0006911
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 Gene3D:1.20.930.10
SUPFAM:SSF47676 FlyBase:FBgn0053526 EMBL:AJ580979
ProteinModelPortal:Q70HU3 IntAct:Q70HU3 STRING:Q70HU3 PRIDE:Q70HU3
InParanoid:Q70HU3 ArrayExpress:Q70HU3 Bgee:Q70HU3 Uniprot:Q70HU3
Length = 1135
Score = 125 (49.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 57/257 (22%), Positives = 102/257 (39%)
Query: 298 TSNGTAASRNE-DSVVK-DKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETEP 355
T +GT + NE + + K +++L S ++S D+ +A + + + N K ++
Sbjct: 227 TDSGTQSKDNEVEHLEKGSSATHLLADASLGKKSGLDDSSSAAEVKSGEDVDNKKHKSS- 285
Query: 356 ESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQDSKKEA 415
+S KR K +E H SS K + S S S + + +
Sbjct: 286 KSDKSKRSEKEREKDRKKESSSHRSSSSSHKSSSSSSSSSSKSSSSKSSSSSSSSHRSSS 345
Query: 416 LNLTDKMLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADH-NSLSVSLSTRVEETA 474
DK A +S S S + R + GS+ + + H +S S S S+ ++
Sbjct: 346 DKYRDKDKARSSSGSSSSS--------KDRERSSGSSSSSSNKHKSSKSSSSSSSSSSSS 397
Query: 475 SGSADFSLRKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSA-----DKEKP 529
SGS+ RK S + R+ + ++ PP S P+A D +KP
Sbjct: 398 SGSSSSKDRKSSSSTSSSSSSSRQDKDKDNKLMPPPAVAASNAAGTSPTASAKESDAQKP 457
Query: 530 LQLSVTKKRRRSLVVAI 546
+ + R+ S+ + I
Sbjct: 458 RSIPIMS-RKASISIEI 473
Score = 57 (25.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 32/110 (29%), Positives = 45/110 (40%)
Query: 768 SSAEEQETDVLKPDGSSDILPKGKEEIEFELVNEVKASALKRWISRSTPASASKPKAKQS 827
S +EE+ D K + + GK+ + +++ LKR + K KA
Sbjct: 623 SKSEEKSDDSSKENDDARSSSPGKDTDADD--DDIP---LKR-VKEDIEQKVQKAKAAAG 676
Query: 828 GGGSPAGATINKPINADESKADLPEKESNPK---GDDQNSPAKLILKDRK 874
G G AG T + NA+ DLPE+ P G D P L L RK
Sbjct: 677 GEGGEAGNTSD---NAE----DLPEEPKKPGPGCGPD-GPPGVLTLHRRK 718
Score = 55 (24.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 25/96 (26%), Positives = 44/96 (45%)
Query: 777 VLKPDGSSDILPKGKEE-IEFELVNEVKASAL--KRWISRSTPASASKPKAKQSGGGSPA 833
V +P + I PK + +E L ++ A+++ K+ + R SA+ P K + P
Sbjct: 556 VERPGAAKLIAPKKIQTLVETNLFSDALAASIEPKKVVKRKR-TSATSPTDKDA----PL 610
Query: 834 GATINKPINADESKADLPEKESNPKGDD--QNSPAK 867
DESK++ +S+ + DD +SP K
Sbjct: 611 APLKFYQDTLDESKSEEKSDDSSKENDDARSSSPGK 646
>CGD|CAL0003874 [details] [associations]
symbol:PGA55 species:5476 "Candida albicans" [GO:0009986
"cell surface" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0003874 GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1
GeneID:3645784 KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 131 (51.2 bits), Expect = 0.00025, P = 0.00025
Identities = 122/757 (16%), Positives = 268/757 (35%)
Query: 182 LVIDESEDVSWDLLRILLASVRKENQDVSPTSWKLGEKVFTKCAAKLKTNLKEAVQSRGI 241
++ SE+ S I +S + +VS +S L ++++ ++ + V S
Sbjct: 111 VISSSSEEASSS--EITSSSEISSSSEVSSSSEVLSSSEIISSSSEVVSSSSK-VSSSSE 167
Query: 242 ALDDYAEIVAC---ICGSDDENPQHGHLIGSENQLATKEPDPPCLGEVVHDVDGISKSVT 298
A +EI++ + S + ++ S +++ + + EVV +S S
Sbjct: 168 ATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSSSSEVSSSSEVVSSSSEVSSS-- 225
Query: 299 SNGTAASRNEDSVVKDKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETEPESA 358
S +++S S S ++ S+V S S S+ + S S V S +E S+
Sbjct: 226 SEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSS--EVVSSSSEVSSSSEVVSSSSEVSSS 283
Query: 359 PRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQDSKKEALNL 418
+ + + E S +SS ++ S + V S ++ S+ ++
Sbjct: 284 SEVSSS--SEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSE---VSS 338
Query: 419 TDKMLADPTSASLKSGLPDGSH-HRRGRTKKQGSTVNQNADHNSLSVSLSTRVEETASGS 477
+ ++++ + S S + S + V+ +++ +S S + + E +S S
Sbjct: 339 SSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSS 398
Query: 478 ADFSLRKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKPLQLSVTKK 537
S E S +E+ ++ E+S VS V+ S++ + S ++
Sbjct: 399 EVVS--SSSEVSSSSEVSSSSEVSSSSEVSSSSE--VSSSSQVISSSE----VVSSSSEV 450
Query: 538 RRRSLVVAISAQ--NISEAXXXXXXXXXXXXXXXPNIDENYSE-DTPKTEIKRKHTSGKE 594
S VV+ S++ + SE I + SE + +E+ +
Sbjct: 451 SSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSS 510
Query: 595 EKKMISKARAKSSDRDGSHSKETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLEETPTT 654
+++S + SS + S S E E + ++
Sbjct: 511 SSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSSEVSSSS 570
Query: 655 EIXXXXXXXXXXXXXISKAGAKSLDGNCSAETPKTGVKRKLTAGKEMDSEAPALNEQLVG 714
E+ S + S S+ + +++ E+ S + + V
Sbjct: 571 EVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVS 630
Query: 715 SRIKVWWPMDETFYKGVVDNYDPIKKKHRILYADGDEEILNLKKE---RWELIKGGS--S 769
S +V + + V + + + + + E+++ E E++ S S
Sbjct: 631 SSSEVSSSSEVSSSSQVTSSSEIVSSSSEV--SSSSSEVVSSSSEVSSSSEVVSSSSEVS 688
Query: 770 AEEQETDVLKPDGSSDILPKGKE-EIEFELVNEVKASALKRWISRSTPASASKPKAKQSG 828
+ + + + SS ++ + E+V+ + +S S+ S+S + S
Sbjct: 689 SSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSE 748
Query: 829 GGSPAGATINKP--INADESKADLPEKESNPKGDDQNSPAKLILKDRKLIFT--LNKQQQ 884
S + T + I++ S E + +S +++I K+ + + +
Sbjct: 749 VSSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQATSSSSEIISSSSKVSSSSEITSSSE 808
Query: 885 AVFKGERHNARDGE-----SAVDNPVERSKEAVKGSS 916
+ N+ E SA V S E + SS
Sbjct: 809 CISSTSEVNSSSSEVVSSSSASSEVVSSSTECISSSS 845
>UNIPROTKB|Q59SG9 [details] [associations]
symbol:PGA55 "Flocculin-like protein" species:237561
"Candida albicans SC5314" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=ISS] CGD:CAL0003874
GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1 GeneID:3645784
KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 131 (51.2 bits), Expect = 0.00025, P = 0.00025
Identities = 122/757 (16%), Positives = 268/757 (35%)
Query: 182 LVIDESEDVSWDLLRILLASVRKENQDVSPTSWKLGEKVFTKCAAKLKTNLKEAVQSRGI 241
++ SE+ S I +S + +VS +S L ++++ ++ + V S
Sbjct: 111 VISSSSEEASSS--EITSSSEISSSSEVSSSSEVLSSSEIISSSSEVVSSSSK-VSSSSE 167
Query: 242 ALDDYAEIVAC---ICGSDDENPQHGHLIGSENQLATKEPDPPCLGEVVHDVDGISKSVT 298
A +EI++ + S + ++ S +++ + + EVV +S S
Sbjct: 168 ATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSSSSEVSSSSEVVSSSSEVSSS-- 225
Query: 299 SNGTAASRNEDSVVKDKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETEPESA 358
S +++S S S ++ S+V S S S+ + S S V S +E S+
Sbjct: 226 SEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSS--EVVSSSSEVSSSSEVVSSSSEVSSS 283
Query: 359 PRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQDSKKEALNL 418
+ + + E S +SS ++ S + V S ++ S+ ++
Sbjct: 284 SEVSSS--SEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSE---VSS 338
Query: 419 TDKMLADPTSASLKSGLPDGSH-HRRGRTKKQGSTVNQNADHNSLSVSLSTRVEETASGS 477
+ ++++ + S S + S + V+ +++ +S S + + E +S S
Sbjct: 339 SSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSS 398
Query: 478 ADFSLRKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKPLQLSVTKK 537
S E S +E+ ++ E+S VS V+ S++ + S ++
Sbjct: 399 EVVS--SSSEVSSSSEVSSSSEVSSSSEVSSSSE--VSSSSQVISSSE----VVSSSSEV 450
Query: 538 RRRSLVVAISAQ--NISEAXXXXXXXXXXXXXXXPNIDENYSE-DTPKTEIKRKHTSGKE 594
S VV+ S++ + SE I + SE + +E+ +
Sbjct: 451 SSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSS 510
Query: 595 EKKMISKARAKSSDRDGSHSKETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLEETPTT 654
+++S + SS + S S E E + ++
Sbjct: 511 SSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSSEVSSSS 570
Query: 655 EIXXXXXXXXXXXXXISKAGAKSLDGNCSAETPKTGVKRKLTAGKEMDSEAPALNEQLVG 714
E+ S + S S+ + +++ E+ S + + V
Sbjct: 571 EVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVS 630
Query: 715 SRIKVWWPMDETFYKGVVDNYDPIKKKHRILYADGDEEILNLKKE---RWELIKGGS--S 769
S +V + + V + + + + + E+++ E E++ S S
Sbjct: 631 SSSEVSSSSEVSSSSQVTSSSEIVSSSSEV--SSSSSEVVSSSSEVSSSSEVVSSSSEVS 688
Query: 770 AEEQETDVLKPDGSSDILPKGKE-EIEFELVNEVKASALKRWISRSTPASASKPKAKQSG 828
+ + + + SS ++ + E+V+ + +S S+ S+S + S
Sbjct: 689 SSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSE 748
Query: 829 GGSPAGATINKP--INADESKADLPEKESNPKGDDQNSPAKLILKDRKLIFT--LNKQQQ 884
S + T + I++ S E + +S +++I K+ + + +
Sbjct: 749 VSSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQATSSSSEIISSSSKVSSSSEITSSSE 808
Query: 885 AVFKGERHNARDGE-----SAVDNPVERSKEAVKGSS 916
+ N+ E SA V S E + SS
Sbjct: 809 CISSTSEVNSSSSEVVSSSSASSEVVSSSTECISSSS 845
>DICTYBASE|DDB_G0291444 [details] [associations]
symbol:DDB_G0291444 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0291444 Pfam:PF05022 EMBL:AAFI02000177
InterPro:IPR007718 RefSeq:XP_635213.1 STRING:Q54EM7
EnsemblProtists:DDB0183896 GeneID:8628159 KEGG:ddi:DDB_G0291444
eggNOG:NOG140707 InParanoid:Q54EM7 OMA:TICEESS Uniprot:Q54EM7
Length = 447
Score = 90 (36.7 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 48/181 (26%), Positives = 75/181 (41%)
Query: 750 DEEILNLKKERWELIKGGSSAEEQETDVLKPDGSSDILPKGKEEIEFELVNEVKASALKR 809
D E + KK++ E SS+ E E+ SSD E E E +V+ S+ K
Sbjct: 214 DSESEDEKKKKVE--SSDSSSSESESSSSSSSDSSD---SSDSESEDEKKKKVEKSSDKE 268
Query: 810 WISRSTPASASKPKAKQSGGGSPAGATINKPINADESKADLPEKESNPKGDDQNSPAKLI 869
S S + K K+ NK +E K + EK+S+ DD+ K++
Sbjct: 269 TSSESESEDSDDEKDKKKS--KKEDKKENK--KQEEKKKPI-EKDSDEDSDDE---MKVV 320
Query: 870 LKDRKLIFTLNKQQQAVFKGERHNAR--DGESAVD-NPVERSKEAVKGSSSNDFGTIVMD 926
+ +K +QQQ V K +N D +S D N +S+ K S+ F + +
Sbjct: 321 EQPKKQEIKQQQQQQTVNKNNSNNNNKIDWKSNQDYNSYSKSETPAKRGSNAPFRRVREE 380
Query: 927 D 927
D
Sbjct: 381 D 381
Score = 82 (33.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 34/149 (22%), Positives = 63/149 (42%)
Query: 469 RVEETASGSADFSLRKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEK 528
+VE+ +S S+D S D SD+E + K K +++ S+ E+ S +++
Sbjct: 77 KVEKDSSDSSDSS--DSESDSSDSEDEKEKEMKVDKKTEDSSSSSESDTESSSSSESEDE 134
Query: 529 PLQLSVTKKRRRSLVVAISAQNISEAXXXXXXXXXXXXXXXPNIDENYSEDTPKTEIKRK 588
KK+ + + S+++ S++ E+ SED K E
Sbjct: 135 -------KKKEKESDDSSSSESESDSSSSESESESSESSSS---SESESEDEKKKESSDS 184
Query: 589 HTSGKEEKKMISKARAKSSDRDGSHSKET 617
S E++K K + +SSD S S+ +
Sbjct: 185 SDSESEDEK---KKKVESSDSSSSESESS 210
>DICTYBASE|DDB_G0293562 [details] [associations]
symbol:DDB_G0293562 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0293562 EMBL:AAFI02000218 eggNOG:NOG253936
InterPro:IPR014898 Pfam:PF08790 RefSeq:XP_629009.1
ProteinModelPortal:Q54BM0 EnsemblProtists:DDB0192009 GeneID:8629293
KEGG:ddi:DDB_G0293562 InParanoid:Q54BM0 OMA:ECASTVI
ProtClustDB:CLSZ2846558 Uniprot:Q54BM0
Length = 527
Score = 124 (48.7 bits), Expect = 0.00040, P = 0.00040
Identities = 65/324 (20%), Positives = 133/324 (41%)
Query: 302 TAASRNEDSVVKDKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETEPESAPRK 361
T + DS D S+ E S+ E+ + K + S+S + +SE+E E+ K
Sbjct: 194 TKKEESSDSDSSDSDSSSSESESEDEKKKKDTKKVEIKKEESES-ESSESESEDENKDNK 252
Query: 362 R-GRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQDSKKEALNLTD 420
+ G K EE D SS + ++K ++K V+ + DS+ E+ + +
Sbjct: 253 KVGTKK------EESSDSD--SSSSESESEDEKKKKNNKKVEAKKEESSDSESESESESS 304
Query: 421 KMLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHN----SLSVS-LSTRVEETAS 475
+ +S S ++ TKK+GS+ ++++ + + + + + EE++
Sbjct: 305 SSSSSSSSESESEDEKKKKDSKKVETKKEGSSDSESSSESVEDEKMDIEKVEIKKEESSD 364
Query: 476 G--SADFSLRKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKPLQLS 533
S+ S K E++ D E + K+ +++ S+ +K++ +D ++ +
Sbjct: 365 SESSSPASSESKEEEKMDIEKEETKKEESSSSSSESEE---EQKKSKKEDSDSDESSE-D 420
Query: 534 VTKKRRRSLVVAISAQNISEAXXXXXXXXXXXXXXXPNIDENYSEDTPKTEIKRKHTSGK 593
KK S + E + + SED K K+ +S +
Sbjct: 421 EKKKEESSSSSESEDEKKKEDSDSESSEDEKKKEDSDSSSSSESEDEDKK--KKDSSSSE 478
Query: 594 EEKKMISKARAKSSDRDGSHSKET 617
E + S + + SS+ D S S ++
Sbjct: 479 SESEKESDSSSSSSESDSSSSSDS 502
Score = 122 (48.0 bits), Expect = 0.00067, P = 0.00067
Identities = 77/334 (23%), Positives = 134/334 (40%)
Query: 294 SKSVTSNGTAASRNEDSVVKDKLSNVLERCSQVERSQSIDAKCSAGPDTS--DSLR---N 348
S +S+ +++S +ED K K +E +++ +S D+ S D+S D + N
Sbjct: 115 SSDSSSSDSSSSESEDEKKKKKEIKKVETKKPIKKVESSDSSDSDSSDSSSEDEKKKKDN 174
Query: 349 VKSETEPESAPRKRGRKPNSLMNPEEGYDHSWI-SSGRKIAKVPGRRKSDDKGVDC---- 403
K ET+ + +K + D S SS + ++K D K V+
Sbjct: 175 KKVETKKVETKKVETKKVETKKEESSDSDSSDSDSSSSESESEDEKKKKDTKKVEIKKEE 234
Query: 404 SPSLNQDSKKEALNLTDKMLADPTSASLKSGLPDG-SHHRRGRTKKQGSTVNQNADHNSL 462
S S + +S+ E N +K + S S S + KK V + +S
Sbjct: 235 SESESSESESEDENKDNKKVGTKKEESSDSDSSSSESESEDEKKKKNNKKVEAKKEESSD 294
Query: 463 SVSLSTRVEETASGSADFSLRKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVP 522
S S S E++S S+ S + ED + + K K+ +T +E G S+ E+
Sbjct: 295 SESESE--SESSSSSSSSSSESESED--EKKKKDSKKVETKKE-------GSSDSESSSE 343
Query: 523 SADKEKPLQLSVTKKRRRSLVVAISAQNISEAXXXXXXXXXXXXXXXPNIDENYSEDTPK 582
S + EK + + K V I + S++ +I++ E+T K
Sbjct: 344 SVEDEK---MDIEK-------VEIKKEESSDSESSSPASSESKEEEKMDIEK---EETKK 390
Query: 583 TEIKRKHTSGKEEKKMISKARAKSSDRDGSHSKE 616
E + +EE+K K++ + SD D S E
Sbjct: 391 EESSSSSSESEEEQK---KSKKEDSDSDESSEDE 421
>UNIPROTKB|Q08170 [details] [associations]
symbol:SRSF4 "Serine/arginine-rich splicing factor 4"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0048025 "negative regulation of
mRNA splicing, via spliceosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=TAS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=TAS] [GO:0006406 "mRNA export from nucleus" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0031124 "mRNA 3'-end processing"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005654 GO:GO:0000166 EMBL:AL357500 GO:GO:0016607
Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0006406
GO:GO:0000398 Reactome:REACT_1788 GO:GO:0048025 eggNOG:COG0724
GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78 HOVERGEN:HBG002295
EMBL:AL590729 KO:K12893 EMBL:L14076 EMBL:BT007415 EMBL:BC002781
EMBL:AC004236 IPI:IPI00000015 PIR:A48133 RefSeq:NP_005617.2
UniGene:Hs.469970 ProteinModelPortal:Q08170 SMR:Q08170
IntAct:Q08170 MINT:MINT-1410521 STRING:Q08170 PhosphoSite:Q08170
DMDM:20981726 PaxDb:Q08170 PeptideAtlas:Q08170 PRIDE:Q08170
DNASU:6429 Ensembl:ENST00000373795 GeneID:6429 KEGG:hsa:6429
UCSC:uc001bro.3 CTD:6429 GeneCards:GC01M029474 H-InvDB:HIX0160019
HGNC:HGNC:10786 HPA:HPA050975 MIM:601940 neXtProt:NX_Q08170
PharmGKB:PA35702 InParanoid:Q08170 OMA:REHAKSE OrthoDB:EOG41C6X9
PhylomeDB:Q08170 ChiTaRS:SRSF4 GenomeRNAi:6429 NextBio:24969
ArrayExpress:Q08170 Bgee:Q08170 CleanEx:HS_SFRS4
Genevestigator:Q08170 GermOnline:ENSG00000116350 Uniprot:Q08170
Length = 494
Score = 122 (48.0 bits), Expect = 0.00061, P = 0.00061
Identities = 74/328 (22%), Positives = 124/328 (37%)
Query: 300 NGTAASRNEDSVVKDKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETEPESAP 359
+GT + + +V+DK + R RS S S S S R+ S++ S
Sbjct: 161 DGTEVNGRKIRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRS-RSGSSKSS-HSKS 218
Query: 360 RKRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDC--SPSLNQDSKKEALN 417
R R R + + S S ++ ++ P + KS + S S ++D +E +
Sbjct: 219 RSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQ 278
Query: 418 LTDKM----LADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVSLSTRVEET 473
D + P+ KS S RR +K+GS + SL S S +
Sbjct: 279 NNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKG 338
Query: 474 ASGSADFSLRKKPED------RSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKE 527
S S S R K +D RS E + R RS++ E S+ G S++++ S+ K+
Sbjct: 339 GSRSRSRS-RSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRG---SKRDSKAGSSKKK 394
Query: 528 KPLQLSVTKKRRRSLVVAISAQNISEAXXXXXXXXXXXXXXXPNIDENYSEDTPKTEIKR 587
K ++ R S V+ ++ + S K++
Sbjct: 395 KKEDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNL 454
Query: 588 KHTSGKEEKKMISKARAKSSDRDGSHSK 615
S + K SK R++S R S S+
Sbjct: 455 PSES-RSRSKSASKTRSRSKSRSRSASR 481
>POMBASE|SPBC1711.05 [details] [associations]
symbol:SPBC1711.05 "nucleocytoplasmic transport
chaperone Srp40 (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0003674 "molecular_function" evidence=ND] [GO:0005730
"nucleolus" evidence=ISO;IDA] [GO:0006605 "protein targeting"
evidence=NAS] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISM] InterPro:IPR006594 PROSITE:PS50896 SMART:SM00667
PomBase:SPBC1711.05 Pfam:PF05022 GO:GO:0006605 GO:GO:0005730
EMBL:CU329671 GO:GO:0006913 InterPro:IPR013720 Pfam:PF08513
eggNOG:NOG318801 InterPro:IPR007718 OrthoDB:EOG4M68TB
RefSeq:NP_595878.1 ProteinModelPortal:Q9P785 STRING:Q9P785
PRIDE:Q9P785 EnsemblFungi:SPBC1711.05.1 GeneID:2539687
KEGG:spo:SPBC1711.05 OMA:RKHFSRI NextBio:20800841 Uniprot:Q9P785
Length = 451
Score = 121 (47.7 bits), Expect = 0.00067, P = 0.00067
Identities = 66/297 (22%), Positives = 114/297 (38%)
Query: 218 EKVFTKCAAKLKTNLKEAVQSRGIALDDYAEIVACICGSDDENPQHGHLIGSENQLATKE 277
+K+ K A K + G + D+ + S ++N SE++ ++++
Sbjct: 84 QKISKKGAPPEKAHSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSED 143
Query: 278 PDPPCLG---EVVHDVDGI-SKSVTSNGTAASRNEDSVVKDKLSNVLERCSQVER---SQ 330
D E +G S S +S+ + S +ED+ S+ S + S
Sbjct: 144 SDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSS 203
Query: 331 SIDAKCSAGPDTSDSLRNVKSETEPESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKV 390
S D++ + + SDS + S S+ +S E + S SS ++
Sbjct: 204 SSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSES 263
Query: 391 PGRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLADPTSASLKSGLPDGSHHRRGRTKKQG 450
K D + S S + S + + ++ D S S S S G +
Sbjct: 264 ESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNSNTDT 323
Query: 451 ST---VNQNADHNSLSVSLSTRV-EETASGSADFSLRKKPED-RSDTEIKHRKRSKT 502
+T V+ + NS S ST V +E +S D SL++K ED S T K + +KT
Sbjct: 324 TTSGEVSAQSSTNSTSSEESTSVKDEDSSKIHDKSLKRKHEDDESSTSTKSSRTTKT 380
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.308 0.127 0.351 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 929 873 0.00085 122 3 11 23 0.38 35
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 44
No. of states in DFA: 622 (66 KB)
Total size of DFA: 392 KB (2191 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 92.26u 0.10s 92.36t Elapsed: 00:00:04
Total cpu time: 92.28u 0.10s 92.38t Elapsed: 00:00:04
Start: Mon May 20 18:26:24 2013 End: Mon May 20 18:26:28 2013