Your job contains 1 sequence.
>002390
MNFIHSNPVLLGIPYKLDQIVLNFVLFFSLVMMLDNTKCRENFAGEKKCLNSELWHACAG
PLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQLHNLTMHADVET
DEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLTASDTSTHGGFSVPRRAA
EKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGD
SVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNP
RASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPN
SHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPLRLKRPWPSGLPSFHGMKD
GDMSINSPLMWLQGGVGDQGIQSLNFQGYGVTPWMQPRLDASIPGLQPDVYQAMAAAALQ
EMRTVDSSKLASQSLLQFQQSQNVSNGTASMIPRQMLQQSQAQNALLQSFQENQASAQAQ
LLQQQLQRQHSYNEQRQQQQQVQQSQQLHQLSVQPQISNVISTLPHLASSSQSQPPTLQT
VASQCQQSNFSDSLGNPIASSDVSSMHTILGSLSQAGASHLLNSNASNPIISSSAMLTKQ
VTVDNHVPSAVSHCILPQVEQLGAQQSNVSELASLLPPFPGREYSSYHGSGDPQNNLLFG
VSIDSSLMGQNGLPNLKNISSENESLSLPYAASNFTNNVGTDFPLNSDMTTSSCVDESGF
LQSSENVDQVNPPTRTFVKVHKSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQR
SGWQLVFVDRENDVLLLGDDPWQEFVNNVGYIKILSPLEVQQMGKGLSPVTSGPGQRLSS
NNNFDDYVSRQELRSSSNGVASMGSINY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002390
(928 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2204237 - symbol:ARF6 "auxin response factor 6... 2054 5.1e-296 2
TAIR|locus:2152642 - symbol:ARF8 "auxin response factor 8... 1818 3.2e-232 2
TAIR|locus:2202205 - symbol:ARF19 "auxin response factor ... 1394 4.0e-177 2
TAIR|locus:2035454 - symbol:MP "MONOPTEROS" species:3702 ... 1236 1.8e-160 3
TAIR|locus:2174013 - symbol:ARF2 "auxin response factor 2... 1015 1.2e-125 2
TAIR|locus:2175098 - symbol:ARF4 "auxin response factor 4... 960 2.2e-120 2
TAIR|locus:2025991 - symbol:ARF1 "auxin response factor 1... 975 4.2e-117 2
TAIR|locus:2039124 - symbol:ARF11 "auxin response factor ... 902 2.2e-111 3
TAIR|locus:2076765 - symbol:ARF18 "auxin response factor ... 910 2.4e-108 2
TAIR|locus:2138096 - symbol:ARF9 "auxin response factor 9... 871 1.2e-104 2
TAIR|locus:2014731 - symbol:ARF14 "auxin response factor ... 731 3.8e-91 2
TAIR|locus:2009298 - symbol:ARF21 "auxin response factor ... 748 6.2e-91 2
TAIR|locus:2036288 - symbol:ARF22 "auxin response factor ... 727 2.4e-89 2
TAIR|locus:2026145 - symbol:ARF12 "auxin response factor ... 725 3.5e-88 2
TAIR|locus:2206717 - symbol:ARF20 "auxin response factor ... 705 4.4e-88 2
TAIR|locus:2057609 - symbol:ETT "ETTIN" species:3702 "Ara... 874 1.8e-87 1
TAIR|locus:2057517 - symbol:ARF10 "auxin response factor ... 533 1.5e-82 3
TAIR|locus:2126460 - symbol:ARF16 "auxin response factor ... 525 1.1e-77 3
TAIR|locus:2008991 - symbol:ARF13 "AUXIN RESPONSE FACTOR ... 506 1.6e-75 3
TAIR|locus:2029436 - symbol:ARF17 "auxin response factor ... 417 2.9e-49 3
TAIR|locus:2037169 - symbol:ARF23 "auxin response factor ... 437 2.5e-40 1
TAIR|locus:2079537 - symbol:NGA2 "NGATHA2" species:3702 "... 151 3.1e-08 2
UNIPROTKB|Q6K846 - symbol:IAA9 "Auxin-responsive protein ... 134 9.0e-08 1
TAIR|locus:2090527 - symbol:IAA31 "indole-3-acetic acid i... 134 9.0e-08 1
TAIR|locus:2051154 - symbol:IAA13 "auxin-induced protein ... 134 2.8e-07 2
TAIR|locus:2098023 - symbol:IAA30 "indole-3-acetic acid i... 127 5.0e-07 1
TAIR|locus:2041404 - symbol:NGA1 "NGATHA1" species:3702 "... 143 1.1e-06 1
TAIR|locus:2197838 - symbol:IAA12 "indole-3-acetic acid i... 136 1.3e-06 2
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 141 2.3e-06 1
TAIR|locus:2200950 - symbol:NGA3 "NGATHA3" species:3702 "... 141 2.7e-06 1
TAIR|locus:2117007 - symbol:NGA4 "NGATHA4" species:3702 "... 136 8.1e-06 1
TAIR|locus:2080782 - symbol:AT3G11580 species:3702 "Arabi... 129 2.8e-05 1
TAIR|locus:2041324 - symbol:IAA20 "indole-3-acetic acid i... 119 4.7e-05 1
TAIR|locus:2164215 - symbol:DPA4 "DEVELOPMENT-RELATED PcG... 127 5.5e-05 1
TAIR|locus:2039165 - symbol:ABS2 "ABNORMAL SHOOT 2" speci... 125 6.1e-05 1
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 127 8.6e-05 1
TAIR|locus:2170862 - symbol:ATAUX2-11 "AT5G43700" species... 119 8.6e-05 1
TAIR|locus:2012438 - symbol:RAV2 "related to ABI3/VP1 2" ... 127 9.0e-05 1
UNIPROTKB|Q5W670 - symbol:IAA18 "Auxin-responsive protein... 79 0.00012 3
UNIPROTKB|Q5VRR0 - symbol:IAA20 "Auxin-responsive protein... 116 0.00014 2
TAIR|locus:2031185 - symbol:TEM1 "TEMPRANILLO 1" species:... 124 0.00020 1
UNIPROTKB|P49679 - symbol:IAA4/5 "Auxin-induced protein I... 116 0.00023 1
TAIR|locus:2180557 - symbol:IAA28 "AT5G25890" species:370... 114 0.00025 1
TAIR|locus:2090141 - symbol:IAA19 "indole-3-acetic acid i... 116 0.00029 1
DICTYBASE|DDB_G0285837 - symbol:DDB_G0285837 "BRWD group ... 129 0.00029 3
UNIPROTKB|Q75GB1 - symbol:IAA17 "Auxin-responsive protein... 116 0.00063 2
TAIR|locus:2196573 - symbol:IAA5 "indole-3-acetic acid in... 108 0.00086 1
UNIPROTKB|Q7Y1H8 - symbol:IAA14 "Auxin-responsive protein... 112 0.00086 1
TAIR|locus:2018379 - symbol:SHY2 "SHORT HYPOCOTYL 2" spec... 111 0.00098 1
>TAIR|locus:2204237 [details] [associations]
symbol:ARF6 "auxin response factor 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0009908 "flower development"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009886 "post-embryonic morphogenesis" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010051 "xylem and phloem
pattern formation" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC025295
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 HOGENOM:HOG000241141 EMBL:AF013467 EMBL:AY669788
EMBL:EU550049 EMBL:EU550050 EMBL:EU550051 EMBL:EU550052
EMBL:EU550053 EMBL:EU550054 EMBL:EU550055 EMBL:EU550056
EMBL:EU550057 EMBL:EU550058 EMBL:EU550059 EMBL:EU550060
EMBL:EU550061 EMBL:EU550062 EMBL:EU550063 EMBL:EU550064
EMBL:EU550065 EMBL:EU550066 EMBL:EU550067 EMBL:EU550068
EMBL:EU550069 EMBL:EU550070 EMBL:EU550071 EMBL:EU550072
IPI:IPI00533211 IPI:IPI00656643 PIR:F86427 RefSeq:NP_001031115.1
RefSeq:NP_174323.1 UniGene:At.21939 ProteinModelPortal:Q9ZTX8
SMR:Q9ZTX8 IntAct:Q9ZTX8 STRING:Q9ZTX8 PaxDb:Q9ZTX8 PRIDE:Q9ZTX8
EnsemblPlants:AT1G30330.2 GeneID:839913 KEGG:ath:AT1G30330
GeneFarm:3369 TAIR:At1g30330 eggNOG:NOG288258 InParanoid:Q9ZTX8
OMA:ANSHWRS PhylomeDB:Q9ZTX8 ProtClustDB:CLSN2686713
Genevestigator:Q9ZTX8 GermOnline:AT1G30330 Uniprot:Q9ZTX8
Length = 935
Score = 2054 (728.1 bits), Expect = 5.1e-296, Sum P(2) = 5.1e-296
Identities = 389/445 (87%), Positives = 408/445 (91%)
Query: 45 GEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQ 104
GEK+ LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYP+L PQ
Sbjct: 17 GEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQ 76
Query: 105 LICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLTA 164
LICQLHN+TMHADVETDEVYAQMTLQPL+ QEQKD YL PAELG P++QPTNYFCKTLTA
Sbjct: 77 LICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYL-PAELGVPSRQPTNYFCKTLTA 135
Query: 165 SDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 224
SDTSTHGGFSVPRRAAEKVFPPLDYSQ PPAQEL+ARDLHDNEWKFRHIFRGQPKRHLLT
Sbjct: 136 SDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLT 195
Query: 225 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLXXX 284
TGWSVFVSAKRLVAGDSVLFIWN+KNQLLLGIRRA RPQTVMPSSVLSSDSMH+GLL
Sbjct: 196 TGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAA 255
Query: 285 XXXXXTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 344
TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM
Sbjct: 256 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 315
Query: 345 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPLRL 404
GTITGI DLDP RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY SPFPLRL
Sbjct: 316 GTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRL 375
Query: 405 KRPWPSGLPSFHGMKDGDM--SINSPLMWLQGGVGDQGIQSLNFQGYGVTPWMQPRLDAS 462
KRPWP GLPSFHG+K+ DM S++SPLMW D+G+QSLNFQG GV PWMQPRLD S
Sbjct: 376 KRPWPPGLPSFHGLKEDDMGMSMSSPLMW------DRGLQSLNFQGMGVNPWMQPRLDTS 429
Query: 463 -IPGLQPDVYQAMAAAALQEMRTVD 486
+ G+Q DVYQAMAAAALQ+MR +D
Sbjct: 430 GLLGMQNDVYQAMAAAALQDMRGID 454
Score = 812 (290.9 bits), Expect = 5.1e-296, Sum P(2) = 5.1e-296
Identities = 191/364 (52%), Positives = 236/364 (64%)
Query: 580 VISTLPHLAXXXXXXXXTLQTVASQCQQSNFSDSLGNPIASSDVSSMHTILGSLSQAGAS 639
V+S + LQ++ S C Q +FSD+ G ++ +S +HT+L + SQ +S
Sbjct: 579 VVSAMSQFGSASQPNTSPLQSMTSLCHQQSFSDTNGG---NNPISPLHTLLSNFSQDESS 635
Query: 640 HLLXXXXXXXXXXXXXMLTKQVTVDNHVP--SAVSHCILPQVEQLG-AQQSNVSELASLL 696
LL +K+ VD+ A ++ +EQLG + SNV A L
Sbjct: 636 QLLHLTRTNSAMTSSGWPSKRPAVDSSFQHSGAGNNNTQSVLEQLGQSHTSNVPPNAVSL 695
Query: 697 PPFPG-REYS-SYHGSG-DPQNNLLFGVSIDSS-LMGQNGLPNLKNISSEN-ESLSLPYA 751
PPFPG RE S GS DP ++LLFGV+IDSS L+ NG+ NL++I E +S +LP+
Sbjct: 696 PPFPGGRECSIEQEGSASDPHSHLLFGVNIDSSSLLMPNGMSNLRSIGIEGGDSTTLPFT 755
Query: 752 ASNFTNNVGTDFPLNSDMTT-SSCVDESGFLQSSENVDQVNPPTRTFVKVHKSGSFGRSL 810
+SNF N DF N MTT SSC+DESGFLQSSEN+ NP + TFVKV+KSGSFGRSL
Sbjct: 756 SSNFNN----DFSGNLAMTTPSSCIDESGFLQSSENLGSENPQSNTFVKVYKSGSFGRSL 811
Query: 811 DISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVG 870
DISKFSSY ELRSELARMFGLEGQLEDP RSGWQLVFVDRENDVLLLGDDPW EFV++V
Sbjct: 812 DISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSVW 871
Query: 871 YIKILSPLEVQQMGK-GLSPVTSGPGQ----RLSSNNNFDDYVSRQELRSSSNGVASMG- 924
IKILSP EVQQMGK GL + S P +L SN N DD+ +R + R+ NG+AS+G
Sbjct: 872 CIKILSPQEVQQMGKRGLELLNSAPSSNNVDKLPSNGNCDDFGNRSDPRNLGNGIASVGG 931
Query: 925 SINY 928
S NY
Sbjct: 932 SFNY 935
Score = 83 (34.3 bits), Expect = 6.8e-219, Sum P(2) = 6.8e-219
Identities = 25/72 (34%), Positives = 35/72 (48%)
Query: 659 KQVTVDNHVPSAVSHCILPQVEQLG-AQQSNVSELASLLPPFPGREYSSYHGSGDP---Q 714
+Q VDNH PSA S ++ + Q G A Q N S L S+ + +S +G +P
Sbjct: 563 QQQVVDNHNPSASSAAVVSAMSQFGSASQPNTSPLQSMTSLCHQQSFSDTNGGNNPISPL 622
Query: 715 NNLLFGVSIDSS 726
+ LL S D S
Sbjct: 623 HTLLSNFSQDES 634
Score = 44 (20.5 bits), Expect = 1.5e-83, Sum P(2) = 1.5e-83
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 125 AQMTLQPLSPQEQKDVYLLPAELGAPNKQ 153
+Q Q LS Q+Q+ YL E P Q
Sbjct: 522 SQQQQQQLSQQQQQQAYLGVPETHQPQSQ 550
>TAIR|locus:2152642 [details] [associations]
symbol:ARF8 "auxin response factor 8" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0009908
"flower development" evidence=IGI] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009886 "post-embryonic
morphogenesis" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009908 HOGENOM:HOG000241141
ProtClustDB:CLSN2686713 EMBL:AF042196 EMBL:AY669790 EMBL:AB024026
IPI:IPI00525703 IPI:IPI00846789 RefSeq:NP_001078672.1
RefSeq:NP_198518.1 UniGene:At.23446 ProteinModelPortal:Q9FGV1
SMR:Q9FGV1 IntAct:Q9FGV1 STRING:Q9FGV1 PaxDb:Q9FGV1 PRIDE:Q9FGV1
EnsemblPlants:AT5G37020.1 GeneID:833672 KEGG:ath:AT5G37020
GeneFarm:3372 TAIR:At5g37020 eggNOG:NOG292968 InParanoid:Q9FGV1
OMA:NDAYLPA PhylomeDB:Q9FGV1 Genevestigator:Q9FGV1
GermOnline:AT5G37020 Uniprot:Q9FGV1
Length = 811
Score = 1818 (645.0 bits), Expect = 3.2e-232, Sum P(2) = 3.2e-232
Identities = 348/445 (78%), Positives = 381/445 (85%)
Query: 40 RENFAGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYP 99
++ GEK CLNSELWHACAGPLVSLP GSRVVYFPQGHSEQVAA+TNKEVD HIPNYP
Sbjct: 10 QQGHEGEK-CLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYP 68
Query: 100 NLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFC 159
+LPPQLICQLHN+TMHADVETDEVYAQMTLQPL+P+EQK+ ++ P ELG P+KQP+NYFC
Sbjct: 69 SLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFV-PIELGIPSKQPSNYFC 127
Query: 160 KTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPK 219
KTLTASDTSTHGGFSVPRRAAEKVFPPLDY+ PPAQELIARDLHD EWKFRHIFRGQPK
Sbjct: 128 KTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPK 187
Query: 220 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIG 279
RHLLTTGWSVFVSAKRLVAGDSV+FI NEKNQL LGIR ATRPQT++PSSVLSSDSMHIG
Sbjct: 188 RHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIG 247
Query: 280 LLXXXXXXXXTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS 339
LL TNS FT+F++PRAS SEFVI L+KY+KAV+HTR+SVGMRFRMLFETEESS
Sbjct: 248 LLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESS 307
Query: 340 VRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSP 399
VRRYMGTITGISDLD VRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY S
Sbjct: 308 VRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSL 367
Query: 400 FPLRLKRPWPSGLPSFHGMKDGDMSINSPLMWLQGGVGDQ-GIQSLNFQGYGVTPWMQPR 458
FPLRLKRPW +G S + DG + S L WL+GG G+Q G+ LN+ G+ PWMQ R
Sbjct: 368 FPLRLKRPWHAGTSS---LPDGRGDLGSGLTWLRGGGGEQQGLLPLNYPSVGLFPWMQQR 424
Query: 459 LDASIPGLQPDV-YQAMAAAALQEM 482
LD S G + YQAM AA LQ +
Sbjct: 425 LDLSQMGTDNNQQYQAMLAAGLQNI 449
Score = 445 (161.7 bits), Expect = 3.2e-232, Sum P(2) = 3.2e-232
Identities = 105/220 (47%), Positives = 133/220 (60%)
Query: 669 SAVSHCILPQ---VEQLGAQQSNV-SELASLLPPFPGREYSSYHGSGDPQNNLLFGVSID 724
S +LP+ E + SN SE SL +PG+ + G+PQN LFGV D
Sbjct: 588 SITGQSVLPEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLALE--PGNPQNPSLFGVDPD 645
Query: 725 SSLMGQNGLPNLKNISSENESLSLPYAASNFTNNVGTDFPLNSDMTTSSCVDESGFLQSS 784
S L + +P + S + E+ + S F N++ + D TT + +G + SS
Sbjct: 646 SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSL---YSCMQD-TTHELLHGAGQINSS 701
Query: 785 ENVDQVNPPTRTFVKVHKSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQ 844
T+ FVKV+KSGS GRSLDIS+FSSY ELR EL +MF +EG LEDP RSGWQ
Sbjct: 702 NQ-------TKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQ 754
Query: 845 LVFVDRENDVLLLGDDPWQEFVNNVGYIKILSPLEVQQMG 884
LVFVD+END+LLLGDDPW+ FVNNV YIKILSP +V QMG
Sbjct: 755 LVFVDKENDILLLGDDPWESFVNNVWYIKILSPEDVHQMG 794
>TAIR|locus:2202205 [details] [associations]
symbol:ARF19 "auxin response factor 19" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0048366 "leaf
development" evidence=IGI] [GO:0048527 "lateral root development"
evidence=IGI;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0010311
"lateral root formation" evidence=IGI] [GO:0007155 "cell adhesion"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0010583 "response to cyclopentenone" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0009723 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0046983 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010311 GO:GO:0048366 HOGENOM:HOG000241141
EMBL:U53672 EMBL:AY008390 EMBL:AY669794 EMBL:AC069143 EMBL:AB493467
EMBL:AJ441312 IPI:IPI00534870 PIR:G86325 RefSeq:NP_173356.1
UniGene:At.10488 ProteinModelPortal:Q8RYC8 SMR:Q8RYC8 IntAct:Q8RYC8
STRING:Q8RYC8 EnsemblPlants:AT1G19220.1 GeneID:838505
KEGG:ath:AT1G19220 GeneFarm:3421 TAIR:At1g19220 eggNOG:NOG331338
InParanoid:Q8RYC8 OMA:WEIEPVI PhylomeDB:Q8RYC8
ProtClustDB:CLSN2914206 Genevestigator:Q8RYC8 GermOnline:AT1G19220
Uniprot:Q8RYC8
Length = 1086
Score = 1394 (495.8 bits), Expect = 4.0e-177, Sum P(2) = 4.0e-177
Identities = 270/435 (62%), Positives = 329/435 (75%)
Query: 45 GEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQ 104
GEKK +NS+LWHACAGPLVSLPPVGS VVYFPQGHSEQVAAS K+ D IPNYPNLP +
Sbjct: 15 GEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTD-FIPNYPNLPSK 73
Query: 105 LICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAP-NKQPTNYFCKTLT 163
LIC LH++T+HAD ETDEVYAQMTLQP++ +++ LL +++G N+QPT +FCKTLT
Sbjct: 74 LICLLHSVTLHADTETDEVYAQMTLQPVNKYDREA--LLASDMGLKLNRQPTEFFCKTLT 131
Query: 164 ASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 223
ASDTSTHGGFSVPRRAAEK+FPPLD+S PPAQE++A+DLHD W FRHI+RGQPKRHLL
Sbjct: 132 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLL 191
Query: 224 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLXX 283
TTGWSVFVS KRL AGDSVLF+ +EK+QL+LGIRRA R + SSV+SSDSMHIG+L
Sbjct: 192 TTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILAA 251
Query: 284 XXXXXXTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 343
+S FTIF+NPRASPSEFV+PLAKY KA+Y +VS+GMRFRM+FETE+ VRRY
Sbjct: 252 AAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALY-AQVSLGMRFRMMFETEDCGVRRY 310
Query: 344 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPL- 402
MGT+TGISDLDPVRW S WR+++VGWDESTAG+R RVS+WEIEP+ T P Y P P
Sbjct: 311 MGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVIT-PFYICPPPFF 369
Query: 403 RLKRPWPSGLPSFHGMKDGDMSINSPLMWLQGGVGDQGIQSLNFQGYGVTPWMQPRLDAS 462
R K P G+P D + + + W+ G + QS F G + WM + +
Sbjct: 370 RPKYPRQPGMPDDE--LDMENAFKRAMPWMGEDFGMKDAQSSMFPGLSLVQWMSMQQNNP 427
Query: 463 IPG-LQPDVYQAMAA 476
+ G P + A+++
Sbjct: 428 LSGSATPQLPSALSS 442
Score = 348 (127.6 bits), Expect = 4.0e-177, Sum P(2) = 4.0e-177
Identities = 106/291 (36%), Positives = 148/291 (50%)
Query: 604 QCQQSNFSDSLGNPIASSDVSSMHTILGSLSQAGASHLLXXXXXXXXXXXXXMLTKQVTV 663
Q + SDS+ AS+ V ++T S G ++ +T Q+ V
Sbjct: 776 QAASVSASDSVFER-ASNPVQELYTKTESRISQG---MMNMKSAGEHFRFKSAVTDQIDV 831
Query: 664 DNHVPSAVSHCILPQVEQLG-AQQSNVSELASLLPPFPGREYSSYHGSGDPQNNLLF--- 719
+ ++C P V +G QQ L S F G + S+H P+NNL F
Sbjct: 832 ST---AGTTYC--PDV--VGPVQQQQTFPLPSF--GFDG-DCQSHH----PRNNLAFPGN 877
Query: 720 --GVSID---SSLMGQNGLPNLKNISSENESLSLPYAASNFTNNVGT-DFPLNSDMTTS- 772
V+ D S QN +PN N + E+ L AA + + + G P +
Sbjct: 878 LEAVTSDPLYSQKDFQNLVPNYGNTPRDIET-ELSSAAIS-SQSFGIPSIPFKPGCSNEV 935
Query: 773 SCVDESGFLQSSENVDQVNPPTRTFVKVHKSGSFGRSLDISKFSSYDELRSELARMFGLE 832
+++SG + RT+ KV K GS GRS+D++++S YDELR +LARMFG+E
Sbjct: 936 GGINDSGIMNGGGLWPNQTQRMRTYTKVQKRGSVGRSIDVTRYSGYDELRHDLARMFGIE 995
Query: 833 GQLEDPQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVGYIKILSPLEVQQM 883
GQLEDP S W+LV+ D END+LL+GDDPW+EFVN V IKILS +EVQQM
Sbjct: 996 GQLEDPLTSDWKLVYTDHENDILLVGDDPWEEFVNCVQNIKILSSVEVQQM 1046
Score = 51 (23.0 bits), Expect = 9.8e-146, Sum P(2) = 9.8e-146
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 872 IKILSPLEVQQMGKGLSPVTSGPGQRLSSNNNFDDYVSRQELRSSSN 918
+++L L+ QQ + + PV+S +LS+ + Q+L SS N
Sbjct: 648 LQLLQKLQQQQQQQSIPPVSSSLQPQLSALQQTQSH-QLQQLLSSQN 693
>TAIR|locus:2035454 [details] [associations]
symbol:MP "MONOPTEROS" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IEP]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0009790 "embryo
development" evidence=IGI] [GO:0009908 "flower development"
evidence=IGI] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IGI] [GO:0048364 "root development" evidence=IGI]
[GO:0048507 "meristem development" evidence=IGI;RCA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=IMP;RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0009942 "longitudinal axis specification"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0016020 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908 GO:GO:0048507
EMBL:AC007797 KO:K14486 EMBL:AF037228 EMBL:AF037229 EMBL:AF334716
EMBL:BT002050 EMBL:BT008805 EMBL:AB199792 EMBL:U79557 EMBL:EF598523
EMBL:EF598524 EMBL:EF598525 EMBL:EF598526 EMBL:EF598527
EMBL:EF598528 EMBL:EF598529 EMBL:EF598530 EMBL:EF598531
EMBL:EF598532 EMBL:EF598533 EMBL:EF598534 EMBL:EF598535
EMBL:EF598536 EMBL:EF598537 EMBL:EF598538 EMBL:EF598539
EMBL:EF598540 EMBL:EF598541 EMBL:EF598542 EMBL:EF598543
EMBL:EF598544 EMBL:EF598545 EMBL:EF598546 IPI:IPI00538603
PIR:G86331 PIR:T51807 RefSeq:NP_173414.1 UniGene:At.10494
UniGene:At.41731 ProteinModelPortal:P93024 SMR:P93024 IntAct:P93024
STRING:P93024 PaxDb:P93024 PRIDE:P93024 EnsemblPlants:AT1G19850.1
GeneID:838573 KEGG:ath:AT1G19850 GeneFarm:3368 TAIR:At1g19850
eggNOG:NOG291711 InParanoid:P93024 OMA:ARYNKAT PhylomeDB:P93024
ProtClustDB:CLSN2682929 Genevestigator:P93024 GermOnline:AT1G19850
GO:GO:0010305 GO:GO:0009942 Uniprot:P93024
Length = 902
Score = 1236 (440.2 bits), Expect = 1.8e-160, Sum P(3) = 1.8e-160
Identities = 235/385 (61%), Positives = 293/385 (76%)
Query: 33 MLDNTKCRENFAGEKK-CLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEV 91
+L+ K ++ +G +K +NSELWHACAGPLV LP VGS V YF QGHSEQVA ST +
Sbjct: 33 LLEEMKLLKDQSGTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSA 92
Query: 92 DAHIPNYPNLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGA-- 149
+PNYPNLP QL+CQ+HN+T+HAD ++DE+YAQM+LQP+ ++DV+ +P + G
Sbjct: 93 TTQVPNYPNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPV--HSERDVFPVP-DFGMLR 149
Query: 150 PNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWK 209
+K PT +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLDYS PP QEL+ RDLH+N W
Sbjct: 150 GSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWT 209
Query: 210 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSS 269
FRHI+RGQPKRHLLTTGWS+FV +KRL AGDSVLFI +EK+QL++G+RRA R QT +PSS
Sbjct: 210 FRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSS 269
Query: 270 VLSSDSMHIGLLXXXXXXXXTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRF 329
VLS+DSMHIG+L + F IFYNPRA P+EFVIPLAKY KA+ +++SVGMRF
Sbjct: 270 VLSADSMHIGVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRF 329
Query: 330 RMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIE- 388
M+FETE+S RRYMGTI GISDLDP+RWP S WR+++V WDE ++ RVS W+IE
Sbjct: 330 GMMFETEDSGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIET 389
Query: 389 P--LTTFPMYSSPFPLRLKRPWPSG 411
P L FP +S +L + +G
Sbjct: 390 PESLFIFPSLTSGLKRQLHPSYFAG 414
Score = 327 (120.2 bits), Expect = 1.8e-160, Sum P(3) = 1.8e-160
Identities = 79/174 (45%), Positives = 106/174 (60%)
Query: 727 LMGQNGLPNLKNISSENESLSLPYAASNFTNNVGTDFPLNSDMT-TSSC---VDESGFLQ 782
L+G N +++ S+ S S +A S + DFP NS T TSS D+ Q
Sbjct: 722 LVGNNNTSFAQDVQSQITSAS--FADSQAFSR--QDFPDNSGGTGTSSSNVDFDDCSLRQ 777
Query: 783 SSENVDQ---VNPPTRTFVKVHKSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQ 839
+S+ P RT+ KV K+GS GRS+D++ F Y+EL+S + MFGLEG L PQ
Sbjct: 778 NSKGSSWQKIATPRVRTYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQ 837
Query: 840 RSGWQLVFVDRENDVLLLGDDPWQEFVNNVGYIKILSPLEVQQMGK-GLSPVTS 892
SGW+LV+VD E+DVLL+GDDPW+EFV V I+ILSP EVQQM + G+ + S
Sbjct: 838 SSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKLLNS 891
Score = 53 (23.7 bits), Expect = 2.1e-135, Sum P(4) = 2.1e-135
Identities = 39/180 (21%), Positives = 71/180 (39%)
Query: 713 PQNNLLFGVSIDSSLMGQNGLPNLKNISSENESLSLPYAASNFTNNVGTDFPLN--SDMT 770
PQN L S ++ + L + ++ E+ +L +S + G + + S +T
Sbjct: 502 PQNKLTVNPSASNTSGQEQNLSQSMSAPAKPENSTLSGCSSGRVQH-GLEQSMEQASQVT 560
Query: 771 TSSCVDESGFLQSSENVDQVNP-PTRTFVKVHKSGSFGRSLDISKFS--SYDELRSELAR 827
TS+ +E Q + +P + + +S I+ FS DEL S+++
Sbjct: 561 TSTVCNEEKVNQLLQKPGASSPVQADQCLDITHQIYQPQSDPINGFSFLETDELTSQVSS 620
Query: 828 MFGLEGQLEDP----QRSGWQLVFVDRENDVLLLGDDPWQEFVNNVGYIKILSPLEVQQM 883
L G + P + +V D N L D W +N + + + SPL Q +
Sbjct: 621 FQSLAGSYKQPFILSSQDSSAVVLPDSTNSPLF--HDVWDTQLNGLKFDQF-SPLMQQDL 677
Score = 47 (21.6 bits), Expect = 2.1e-135, Sum P(4) = 2.1e-135
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 889 PVTSGPGQRLSSNNNFDDYVSRQELRSSS 917
P SG SSN +FDD RQ + SS
Sbjct: 755 PDNSGGTGTSSSNVDFDDCSLRQNSKGSS 783
Score = 37 (18.1 bits), Expect = 1.8e-160, Sum P(3) = 1.8e-160
Identities = 19/60 (31%), Positives = 25/60 (41%)
Query: 387 IEPLTTFP-MYSSPFPLRLKRPWPS-GLPSF-----------HGMKDGDMSINSPLMWLQ 433
I P +FP M S + RP + +PSF +G GDM + PLM Q
Sbjct: 436 IMPYASFPSMASEQLMKMMMRPHNNQNVPSFMSEMQQNIVMGNGGLLGDMKMQQPLMMNQ 495
>TAIR|locus:2174013 [details] [associations]
symbol:ARF2 "auxin response factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;TAS] [GO:0009911 "positive regulation of flower
development" evidence=IMP] [GO:0010047 "fruit dehiscence"
evidence=IMP] [GO:0010150 "leaf senescence" evidence=IMP]
[GO:0010227 "floral organ abscission" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0048481 "ovule development" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=RCA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0009737 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045892 GO:GO:0008285 GO:GO:0009734 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0010150 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009911 GO:GO:0010047
GO:GO:0010227 GO:GO:0048481 EMBL:AY669787 EMBL:AB016880
EMBL:AF336918 EMBL:AF378862 EMBL:BT000784 EMBL:BT001072
EMBL:AK221252 EMBL:AK221254 EMBL:AK221274 EMBL:AK221277
EMBL:AK221282 EMBL:AK221305 EMBL:U89771 EMBL:AJ441313 EMBL:AJ458328
IPI:IPI00518739 RefSeq:NP_201006.2 RefSeq:NP_851244.1
RefSeq:NP_974980.1 UniGene:At.21704 ProteinModelPortal:Q94JM3
SMR:Q94JM3 DIP:DIP-46014N IntAct:Q94JM3 STRING:Q94JM3 PaxDb:Q94JM3
PRIDE:Q94JM3 EnsemblPlants:AT5G62000.1 EnsemblPlants:AT5G62000.2
EnsemblPlants:AT5G62000.3 GeneID:836321 KEGG:ath:AT5G62000
GeneFarm:3364 TAIR:At5g62000 eggNOG:NOG255064 InParanoid:Q94JM3
OMA:HTESVEC PhylomeDB:Q94JM3 ProtClustDB:CLSN2680590
Genevestigator:Q94JM3 GermOnline:AT5G62000 Uniprot:Q94JM3
Length = 859
Score = 1015 (362.4 bits), Expect = 1.2e-125, Sum P(2) = 1.2e-125
Identities = 196/366 (53%), Positives = 260/366 (71%)
Query: 50 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQL 109
L ELWHACAGPLV++P RV YFPQGH EQV ASTN+ + +P Y +LP +L+C++
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCRV 116
Query: 110 HNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLTASDTST 169
N+ + A+ +TDEVYAQ+TL P + Q++ + A L P + + FCKTLTASDTST
Sbjct: 117 INVDLKAEADTDEVYAQITLLPEANQDENAIEK-EAPLPPPPRFQVHSFCKTLTASDTST 175
Query: 170 HGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 229
HGGFSV RR A++ PPLD S+ PP QEL+A+DLH NEW+FRHIFRGQP+RHLL +GWSV
Sbjct: 176 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSV 235
Query: 230 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLXXXXXXXX 289
FVS+KRLVAGD+ +F+ E +L +G+RRA R Q +PSSV+SS SMH+G+L
Sbjct: 236 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIS 295
Query: 290 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 349
T + FT++Y PR SPSEF++P +Y+++V + S+GMRF+M FE EE+ +R+ GTI G
Sbjct: 296 TGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN-YSIGMRFKMRFEGEEAPEQRFTGTIVG 354
Query: 350 ISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPL-RLKRPW 408
I + DP RWP S WRS+KV WDE+++ R RVS W++EP P S P P+ R KRP
Sbjct: 355 IEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALS-PVPMPRPKRPR 413
Query: 409 PSGLPS 414
+ PS
Sbjct: 414 SNIAPS 419
Score = 240 (89.5 bits), Expect = 1.2e-125, Sum P(2) = 1.2e-125
Identities = 69/212 (32%), Positives = 111/212 (52%)
Query: 680 EQLGAQ-QSNVSELASLLPPFPGREYSSYHGSGDPQNNLLFGVSIDSSLMGQNGLPNLKN 738
E + AQ Q+ E + PF +E ++ G N LFG+ + +++ G + + +N
Sbjct: 621 EVVNAQAQAQAREQVTK-QPFTIQEETAKSREG---NCRLFGIPLTNNMNGTDSTMSQRN 676
Query: 739 ISSENESLSLPYAASNFTNNVGTDFPLNSDMTTSSCVDESGFLQSSENVDQVNPPT---R 795
+ N++ L AS ++ +D S T F ++ + T R
Sbjct: 677 --NLNDAAGLTQIASPKVQDL-SDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSR 733
Query: 796 TFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDV 854
+ KVHK G + GRS+D+SKF +Y+EL +EL R+F G+L P++ W +V+ D END+
Sbjct: 734 SCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKKD-WLIVYTDEENDM 792
Query: 855 LLLGDDPWQEFVNNVGYIKILSPLEVQQMGKG 886
+L+GDDPWQEF V I I + EV++M G
Sbjct: 793 MLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPG 824
>TAIR|locus:2175098 [details] [associations]
symbol:ARF4 "auxin response factor 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0010158 "abaxial
cell fate specification" evidence=IGI] [GO:0010050 "vegetative
phase change" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AB011483 GO:GO:0010050
HOGENOM:HOG000241141 GO:GO:0010158 EMBL:AF013466 EMBL:AF344313
EMBL:AY080832 EMBL:AY113977 IPI:IPI00525857 RefSeq:NP_200853.1
UniGene:At.6797 ProteinModelPortal:Q9ZTX9 SMR:Q9ZTX9 IntAct:Q9ZTX9
STRING:Q9ZTX9 PaxDb:Q9ZTX9 PRIDE:Q9ZTX9 EnsemblPlants:AT5G60450.1
GeneID:836166 KEGG:ath:AT5G60450 GeneFarm:3367 TAIR:At5g60450
eggNOG:NOG277773 InParanoid:Q9ZTX9 OMA:RILYTDS PhylomeDB:Q9ZTX9
ProtClustDB:CLSN2686689 Genevestigator:Q9ZTX9 GermOnline:AT5G60450
Uniprot:Q9ZTX9
Length = 788
Score = 960 (343.0 bits), Expect = 2.2e-120, Sum P(2) = 2.2e-120
Identities = 197/377 (52%), Positives = 250/377 (66%)
Query: 45 GEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQ 104
G + SELWHACAGPL LP G+ VVYFPQGH EQ A + IP + +L PQ
Sbjct: 57 GSASSIYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPLEIPKF-DLNPQ 114
Query: 105 LICQLHNLTMHADVETDEVYAQMTLQPLSP-----QEQKDVYLLPAEL---GAPN-KQPT 155
++C++ N+ + A+ +TDEVY Q+TL PL E K+V L E G+ + K+
Sbjct: 115 IVCRVVNVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTP 174
Query: 156 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFR 215
+ FCKTLTASDTSTHGGFSVPRRAAE F PLDY Q P+QELIA+DLH EWKFRHI+R
Sbjct: 175 HMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYR 234
Query: 216 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDS 275
GQP+RHLLTTGWS+FVS K LV+GD+VLF+ +E +L LGIRRA RP+ +P S++ +S
Sbjct: 235 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNS 294
Query: 276 MHIGLLXXXXXXXXTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFET 335
+L T S F +FY+PRA+ +EFVIP KY+ ++ + V +G RFRM FE
Sbjct: 295 CS-NILSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSI-RSPVCIGTRFRMRFEM 352
Query: 336 EESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 395
++S RR G +TG+ DLDP RWPNS WR + V WDES + Q RVS WEI+P + P
Sbjct: 353 DDSPERRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPH 412
Query: 396 YSSPFPLRLKRPWPSGL 412
S R KRPW +GL
Sbjct: 413 LSIQSSPRPKRPW-AGL 428
Score = 245 (91.3 bits), Expect = 2.2e-120, Sum P(2) = 2.2e-120
Identities = 60/189 (31%), Positives = 101/189 (53%)
Query: 698 PFPGREYSSYHGSGDPQNNLLFGVSIDS-SLMGQNGLPNLKNISSENESLSLPYAASNFT 756
P+ + SG P + FG + GLPN N++++ LP+
Sbjct: 576 PYQNPYNAGNQSSGPPSRAINFGEETRKFDAQNEGGLPN--NVTAD-----LPFKIDMMG 628
Query: 757 NNVGTDFPLNSDMTTSSCVDESGF---LQSSENVDQVNPPTRTFVKVHKSGS-FGRSLDI 812
G++ +N+ +S C GF +++ + Q + R KVHK GS GR++D+
Sbjct: 629 KQKGSELNMNA---SSGC-KLFGFSLPVETPASKPQ-SSSKRICTKVHKQGSQVGRAIDL 683
Query: 813 SKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVGYI 872
S+ + YD+L EL R+F +EG L DP++ GW++++ D END++++GDDPW +F N V I
Sbjct: 684 SRLNGYDDLLMELERLFNMEGLLRDPEK-GWRILYTDSENDMMVVGDDPWHDFCNVVWKI 742
Query: 873 KILSPLEVQ 881
+ + EV+
Sbjct: 743 HLYTKEEVE 751
>TAIR|locus:2025991 [details] [associations]
symbol:ARF1 "auxin response factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;IPI] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0010150 "leaf
senescence" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016246
"RNA interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0010150 EMBL:AC007258 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:U83245 EMBL:AY133723 EMBL:BT002748
IPI:IPI00518211 IPI:IPI00520405 PIR:D96621 RefSeq:NP_001031208.1
RefSeq:NP_176184.1 RefSeq:NP_849830.1 UniGene:At.74832
ProteinModelPortal:Q8L7G0 SMR:Q8L7G0 IntAct:Q8L7G0 STRING:Q8L7G0
EnsemblPlants:AT1G59750.1 EnsemblPlants:AT1G59750.3 GeneID:842268
KEGG:ath:AT1G59750 GeneFarm:3363 TAIR:At1g59750 eggNOG:NOG257828
HOGENOM:HOG000241141 InParanoid:Q8L7G0 KO:K14486 OMA:QMPSFNL
PhylomeDB:Q8L7G0 ProtClustDB:CLSN2679699 Genevestigator:Q8L7G0
GermOnline:AT1G59750 Uniprot:Q8L7G0
Length = 665
Score = 975 (348.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 194/364 (53%), Positives = 253/364 (69%)
Query: 53 ELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQLHNL 112
ELWHACAGPLV+LP G RV YFP+GH EQ+ AS ++ ++ +P++ NLP +++C++ N+
Sbjct: 22 ELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCKVINI 80
Query: 113 TMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLTASDTSTHGG 172
A+ ETDEVYAQ+TL P Q + P + P K + FCKTLTASDTSTHGG
Sbjct: 81 QRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQ--EPEKCTVHSFCKTLTASDTSTHGG 138
Query: 173 FSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVS 232
FSV RR A+ PPLD SQ PP QEL+A DLH++EW FRHIFRGQP+RHLLTTGWSVFVS
Sbjct: 139 FSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVS 198
Query: 233 AKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLXXXXXXXXTNS 292
+K+LVAGD+ +F+ E +L +G+RR R QT +PSSV+SS SMHIG+L T +
Sbjct: 199 SKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGT 258
Query: 293 RFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISD 352
F++FY PR S SEF++ + +Y++A ++SVGMRF+M FE EE+ +R+ GTI G+ +
Sbjct: 259 IFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEEAPEKRFSGTIVGVQE 317
Query: 353 LDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSS-PFP-LRLKRPWPS 410
W +S WRS+KV WDE ++ R RVS WE+EPL SS P P R KRP P
Sbjct: 318 NKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPRPP 377
Query: 411 GLPS 414
GLPS
Sbjct: 378 GLPS 381
Score = 199 (75.1 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 46/139 (33%), Positives = 82/139 (58%)
Query: 749 PYAASNFTNNVGTDFPLN---SDMTTSSCVDESGFLQSSENVDQVNPPTRTFVKVHKSGS 805
P ++ F + ++ PLN SD+ + S E L+S + + + R+ KVH GS
Sbjct: 496 PVPSNEFDSGQQSE-PLNINQSDIPSGSGDPEKSSLRSPQ--ESQSRQIRSCTKVHMQGS 552
Query: 806 -FGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPWQE 864
GR++D+++ Y++L +L MF ++G+L + + WQ+V+ D E+D++++GDDPW E
Sbjct: 553 AVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK-WQVVYTDDEDDMMMVGDDPWNE 611
Query: 865 FVNNVGYIKILSPLEVQQM 883
F V I I +P EV+++
Sbjct: 612 FCGMVRKIFIYTPEEVKKL 630
Score = 49 (22.3 bits), Expect = 2.8e-101, Sum P(2) = 2.8e-101
Identities = 21/91 (23%), Positives = 39/91 (42%)
Query: 687 SNVSELASLLPPFPGREYSSYHGSGDPQNNLLFGVSIDSSLMGQNGLPNLKNISSENESL 746
++VS ++ P P E+ S S +P N ++ S + +G P ++ S ES
Sbjct: 485 ASVSGAVAVDQPVPSNEFDSGQQS-EPLN-----IN-QSDIPSGSGDPEKSSLRSPQESQ 537
Query: 747 SLPYAASNFTNNVGTDFPLNSDMTTSSCVDE 777
S + + G+ D+T S C ++
Sbjct: 538 SRQIRSCTKVHMQGSAVGRAIDLTRSECYED 568
>TAIR|locus:2039124 [details] [associations]
symbol:ARF11 "auxin response factor 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC006526 EMBL:AC006418
HOGENOM:HOG000241141 EMBL:AY669791 EMBL:AK229757 EMBL:BX837073
EMBL:AK229924 IPI:IPI00544804 IPI:IPI00547357 IPI:IPI00656718
PIR:A84904 RefSeq:NP_001031548.1 RefSeq:NP_182176.2
RefSeq:NP_973701.1 UniGene:At.36497 ProteinModelPortal:Q9ZPY6
SMR:Q9ZPY6 PRIDE:Q9ZPY6 EnsemblPlants:AT2G46530.3 GeneID:819264
KEGG:ath:AT2G46530 GeneFarm:3388 TAIR:At2g46530 eggNOG:NOG303653
InParanoid:Q9ZPY6 OMA:MFEIEGE PhylomeDB:Q9ZPY6
ProtClustDB:CLSN2681223 ArrayExpress:Q9ZPY6 Genevestigator:Q9ZPY6
Uniprot:Q9ZPY6
Length = 622
Score = 902 (322.6 bits), Expect = 2.2e-111, Sum P(3) = 2.2e-111
Identities = 185/386 (47%), Positives = 252/386 (65%)
Query: 17 LDQIVLNFVLFFSLVMMLDNTKCRENFAGEKKCLNSELWHACAGPLVSLPPVGSRVVYFP 76
L+ ++++ + L + L N L +ELW ACAGPLV +P G RV YFP
Sbjct: 6 LEPLIISIIKLQILQLWLKLIAVGWNLGSNDDELYTELWKACAGPLVEVPRYGERVFYFP 65
Query: 77 QGHSEQVAASTNKEV-DAHIPNYPNLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQ 135
QGH EQ+ ASTN+ V D IP + NLPP+++C++ ++T+ A+ ETDEVYAQ+TLQP +
Sbjct: 66 QGHMEQLVASTNQGVVDQEIPVF-NLPPKILCRVLSVTLKAEHETDEVYAQITLQP--EE 122
Query: 136 EQKDVYLLPAELGAPNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPA 195
+Q + L L P K + F K LTASDTSTHGGFSV R+ A + P LD +Q P
Sbjct: 123 DQSEPTSLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPT 182
Query: 196 QELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLG 255
QEL+ARDLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E L +G
Sbjct: 183 QELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVG 242
Query: 256 IRRATRPQTVMPSSVLSSDSMHIGLLXXXXXXXXTNSRFTIFYNPRASPSEFVIPLAKYV 315
+RR + Q+ MP+SV+SS SM +G+L T + F +FY PR S +F+I + KY+
Sbjct: 243 VRRLAKQQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRIS--QFIISVNKYM 300
Query: 316 KAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTA 375
A+ + S+GMR+RM FE EES R + GTI G DL +WP S WRS+++ WDE ++
Sbjct: 301 MAMKNG-FSLGMRYRMRFEGEESPERIFTGTIIGSGDLSS-QWPASKWRSLQIQWDEPSS 358
Query: 376 GERQPRVSLWEIEPLTTFPMYSSPFP 401
+R +VS WEIEP + P +P P
Sbjct: 359 IQRPNKVSPWEIEPFS--PSALTPTP 382
Score = 193 (73.0 bits), Expect = 2.2e-111, Sum P(3) = 2.2e-111
Identities = 46/118 (38%), Positives = 65/118 (55%)
Query: 767 SDMTTSSCVDESGFLQSSENVDQVNPPTRTFVKVHKSGS-FGRSLDISKFSSYDELRSEL 825
SD TT C D + E Q + TR+ +KV G+ GR++D++ SYDEL EL
Sbjct: 486 SDSTTK-CQDPNSSNSPKEQKQQTS--TRSRIKVQMQGTAVGRAVDLTLLRSYDELIKEL 542
Query: 826 ARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVGYIKILSPLEVQQM 883
+MF +EG+L + W +VF D E D +L+GDDPW EF + I EV++M
Sbjct: 543 EKMFEIEGELSPKDK--WAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKM 598
Score = 39 (18.8 bits), Expect = 2.2e-111, Sum P(3) = 2.2e-111
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 603 SQCQQSN-FSDSLGNPIASSDVSS 625
S+ ++S S+ G+P+ASS +SS
Sbjct: 387 SKSKRSRPISEITGSPVASSFLSS 410
>TAIR|locus:2076765 [details] [associations]
symbol:ARF18 "auxin response factor 18" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL132959 HOGENOM:HOG000241141 EMBL:AF334717
EMBL:AY059746 EMBL:AY070463 EMBL:AY091392 EMBL:AK229945
IPI:IPI00524053 PIR:T47975 RefSeq:NP_567119.1 UniGene:At.17167
UniGene:At.69165 ProteinModelPortal:Q9C5W9 SMR:Q9C5W9 IntAct:Q9C5W9
EnsemblPlants:AT3G61830.1 GeneID:825356 KEGG:ath:AT3G61830
GeneFarm:3414 TAIR:At3g61830 eggNOG:NOG268528 InParanoid:Q9C5W9
OMA:RISQFIV PhylomeDB:Q9C5W9 ProtClustDB:CLSN2917487
Genevestigator:Q9C5W9 GermOnline:AT3G61830 Uniprot:Q9C5W9
Length = 602
Score = 910 (325.4 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
Identities = 195/397 (49%), Positives = 259/397 (65%)
Query: 50 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAH-IPNYPNLPPQLICQ 108
L +ELW CAGPLV +P RV YFPQGH EQ+ ASTN+ +++ IP + +LPP+++C+
Sbjct: 22 LYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVF-DLPPKILCR 80
Query: 109 LHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLTASDTS 168
+ ++T+ A+ ETDEVYAQ+TLQP ++Q + L + P KQ + F K LTASDTS
Sbjct: 81 VLDVTLKAEHETDEVYAQITLQP--EEDQSEPTSLDPPIVGPTKQEFHSFVKILTASDTS 138
Query: 169 THGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWS 228
THGGFSV R+ A + P LD +Q P QEL+ RDLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 139 THGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWS 198
Query: 229 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLXXXXXXX 288
FVS+KRLVAGD+ +F+ E L +G+RR R Q+ MP+SV+SS SMH+G+L
Sbjct: 199 TFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAV 258
Query: 289 XTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 348
T + F +FY PR S +F++ + KY++A+ H S+G RFRM FE EES R + GTI
Sbjct: 259 RTTTIFVVFYKPRIS--QFIVGVNKYMEAIKHG-FSLGTRFRMRFEGEESPERIFTGTIV 315
Query: 349 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYSSPF--P---L 402
G DL +WP S WRS++V WDE T +R +VS WEIEP L T P+ S+P P
Sbjct: 316 GSGDLSS-QWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPI-STPAQQPQSKC 373
Query: 403 RLKRPW-PS----GLPSF-HGMKDGDMSINSPLMWLQ 433
+ RP PS PSF + + SIN+ L Q
Sbjct: 374 KRSRPIEPSVKTPAPPSFLYSLPQSQDSINASLKLFQ 410
Score = 181 (68.8 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
Identities = 48/124 (38%), Positives = 66/124 (53%)
Query: 784 SENVDQVNPPTRTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSG 842
SE Q +RT KV G + GR++D++ SYDEL EL MF ++GQL R
Sbjct: 480 SEQKKQQTSRSRT--KVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDK 535
Query: 843 WQLVFVDRENDVLLLGDDPWQEFVNNVGYIKILSPLEVQQMGKGLSPVTSGPGQRLSSNN 902
W +VF D E D++L GDDPW EF I I S EV++M L ++S N
Sbjct: 536 WIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLK-ISSSLENEEYGNE 594
Query: 903 NFDD 906
+F++
Sbjct: 595 SFEN 598
>TAIR|locus:2138096 [details] [associations]
symbol:ARF9 "auxin response factor 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 HOGENOM:HOG000241141
EMBL:AF082176 EMBL:AC002343 EMBL:AL078468 EMBL:AL161560
EMBL:AF344312 EMBL:AK221865 EMBL:AK228263 IPI:IPI00519218
IPI:IPI00657180 PIR:T08917 RefSeq:NP_001031706.1 RefSeq:NP_194129.1
UniGene:At.3396 ProteinModelPortal:Q9XED8 SMR:Q9XED8 IntAct:Q9XED8
PaxDb:Q9XED8 PRIDE:Q9XED8 EnsemblPlants:AT4G23980.1 GeneID:828498
KEGG:ath:AT4G23980 GeneFarm:3373 TAIR:At4g23980 eggNOG:NOG300390
InParanoid:Q9XED8 OMA:YAQITLI PhylomeDB:Q9XED8
ProtClustDB:CLSN2685375 Genevestigator:Q9XED8 Uniprot:Q9XED8
Length = 638
Score = 871 (311.7 bits), Expect = 1.2e-104, Sum P(2) = 1.2e-104
Identities = 180/370 (48%), Positives = 239/370 (64%)
Query: 42 NFAGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHI--PNYP 99
N GE L ELW CAGPLV +P RV YFPQGH EQ+ AST ++VD + P +
Sbjct: 3 NRGGEY--LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEAST-QQVDLNTMKPLFV 59
Query: 100 NLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQ--EQKDVYLLPAELGAPNKQPTNY 157
LPP+++C + N+++ A+ +TDEVYAQ+TL P+ + E P EL P +
Sbjct: 60 -LPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPK---VHS 115
Query: 158 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQ 217
F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A D+H +WKF+HIFRGQ
Sbjct: 116 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQ 175
Query: 218 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMH 277
P+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+RRA Q+ MPSSV+SS SMH
Sbjct: 176 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMH 235
Query: 278 IGLLXXXXXXXXTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEE 337
+G+L T + F ++Y PR S +F+I L KY++A+ + + SVGMRF+M FE E+
Sbjct: 236 LGVLATARHATQTKTMFIVYYKPRTS--QFIISLNKYLEAMSN-KFSVGMRFKMRFEGED 292
Query: 338 SSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYS 397
S RRY GT+ G+ D P W +S WR ++V WDE + R +VS WEIEP
Sbjct: 293 SPERRYSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVP 351
Query: 398 SPFPLRLKRP 407
L+ KRP
Sbjct: 352 KSVMLKNKRP 361
Score = 185 (70.2 bits), Expect = 1.2e-104, Sum P(2) = 1.2e-104
Identities = 38/94 (40%), Positives = 59/94 (62%)
Query: 794 TRTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDREN 852
TR+ KV G GR++D++ Y+EL ++ ++F ++G+L R+ W++VF D E
Sbjct: 522 TRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS--RNQWEIVFTDDEG 579
Query: 853 DVLLLGDDPWQEFVNNVGYIKILSPLEVQQMGKG 886
D++L+GDDPW EF N V I I S EV++M G
Sbjct: 580 DMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPG 613
>TAIR|locus:2014731 [details] [associations]
symbol:ARF14 "auxin response factor 14" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC007887 IPI:IPI00548517 PIR:G86476
RefSeq:NP_174786.1 UniGene:At.39556 ProteinModelPortal:Q9LQE8
SMR:Q9LQE8 IntAct:Q9LQE8 PRIDE:Q9LQE8 EnsemblPlants:AT1G35540.1
GeneID:840450 KEGG:ath:AT1G35540 GeneFarm:3394 TAIR:At1g35540
OMA:DITEDAM PhylomeDB:Q9LQE8 Genevestigator:Q9LQE8 Uniprot:Q9LQE8
Length = 605
Score = 731 (262.4 bits), Expect = 3.8e-91, Sum P(2) = 3.8e-91
Identities = 151/362 (41%), Positives = 218/362 (60%)
Query: 45 GEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQ 104
G K + +LW CAGPL +P +G +V YFPQGH E V AST +E++ P + P +
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQP-ICDFPSK 77
Query: 105 LICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLTA 164
L C++ + + + +DE YA++TL P + Q ++P + + N F K LTA
Sbjct: 78 LQCRVIAIQLKVENNSDETYAEITLMPDTTQ-----VVIPTQNQNQFRPLVNSFTKVLTA 132
Query: 165 SDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 224
SDTS HGGFSVP++ A + PPLD SQ P QE++A DLH N+W+FRHI+RG +RHLLT
Sbjct: 133 SDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLT 192
Query: 225 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLXXX 284
GW+ F ++K+LV GD ++F+ E +L +GIRRA Q +PSS++S +SM G++
Sbjct: 193 IGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIASA 252
Query: 285 XXXXXTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 344
F + Y PR+S +F++ K++ V + + +VG RF M FE ++ S RR
Sbjct: 253 KHAFDNQCMFIVVYKPRSS--QFIVSYDKFLDVV-NNKFNVGSRFTMRFEGDDFSERRSF 309
Query: 345 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPLRL 404
GTI G+SD P W S WRS++V WDE + R +VS W+IE LT + S L+
Sbjct: 310 GTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLTPWSNVSRSSFLKN 368
Query: 405 KR 406
KR
Sbjct: 369 KR 370
Score = 197 (74.4 bits), Expect = 3.8e-91, Sum P(2) = 3.8e-91
Identities = 48/141 (34%), Positives = 75/141 (53%)
Query: 745 SLSLPYAASNFTNNVGTDFPLNSDMTTSSCVDESGFLQSSENVDQVN-PPTRTFVKVHKS 803
SL+ P + +G + S +T +S L+S + TRT KV
Sbjct: 462 SLATPSVIKDPVEQIGLEI---SRLTQEKKFGQSQILRSPTEIQSKQFSSTRTCTKVQMQ 518
Query: 804 G-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPW 862
G + GR++D+S + YD+L EL ++F L+GQL+ R+ W++ F + E D +L+G+DPW
Sbjct: 519 GVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQ--ARNQWEIAFTNNEEDKMLVGEDPW 576
Query: 863 QEFVNNVGYIKILSPLEVQQM 883
EF N V I I S EV+ +
Sbjct: 577 PEFCNMVKKIFIYSKEEVKNL 597
>TAIR|locus:2009298 [details] [associations]
symbol:ARF21 "auxin response factor 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC023279 EMBL:AC023913 IPI:IPI00539451
PIR:E86468 RefSeq:NP_174701.2 UniGene:At.51930
ProteinModelPortal:Q9C8N9 SMR:Q9C8N9 EnsemblPlants:AT1G34410.1
GeneID:840344 KEGG:ath:AT1G34410 GeneFarm:3425 TAIR:At1g34410
PhylomeDB:Q9C8N9 Genevestigator:Q9C8N9 GermOnline:AT1G34410
Uniprot:Q9C8N9
Length = 606
Score = 748 (268.4 bits), Expect = 6.2e-91, Sum P(2) = 6.2e-91
Identities = 165/398 (41%), Positives = 235/398 (59%)
Query: 45 GEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQ 104
G K + +LW CAGPL +P +G V YFPQG+ E V AST +E++ P +LP +
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQP-ICDLPSK 77
Query: 105 LICQLHNLTMHADVE--TDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTL 162
L C++ + +H VE +DE+YA++TL P + Q ++P + + N F K L
Sbjct: 78 LQCRV--IAIHLKVENNSDEIYAEITLMPDTTQ-----VVIPTQSENRFRPLVNSFTKVL 130
Query: 163 TASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHL 222
TASDTS +GGFSVP++ A + PPLD SQ PAQE++A DLHDN+W+FRH +RG P+RH
Sbjct: 131 TASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHS 190
Query: 223 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLX 282
LTTGW+ F+++K+LV GD ++F+ E +L +GIRRA Q +PSS++S D M G++
Sbjct: 191 LTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIA 250
Query: 283 XXXXXXXTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRR 342
F + Y PR+S +F++ K++ AV + + +VG RF M FE ++ S RR
Sbjct: 251 SAKHAFDNQCIFIVVYKPRSS--QFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSERR 307
Query: 343 YMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIE---PLTTFPMYSSP 399
Y GTI G+SD P W S WRS++V WDE + R +VS WEIE P P S
Sbjct: 308 YFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPALNVPRSSLL 366
Query: 400 FPLRLKRPWPSGLPSFH--------GMKDGDMSINSPL 429
RL+ G S H G + G +S+ SP+
Sbjct: 367 KNKRLREVNEFGSSSSHLLPPILTQGQEIGQLSVASPM 404
Score = 178 (67.7 bits), Expect = 6.2e-91, Sum P(2) = 6.2e-91
Identities = 48/148 (32%), Positives = 76/148 (51%)
Query: 745 SLSLPYAASNFTNNVGTDFPLNSDMTTSSCVDESGFLQSSENVDQVN-PPTRTFVKVHKS 803
+L P + +G+D S +T +S L+S + +RT KV
Sbjct: 463 TLDTPPMIKDPIKQIGSDI---SKLTERKKFGQSQTLRSPIEIQSKQFSSSRTCTKVQMQ 519
Query: 804 G-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPW 862
G + GR++D+S + YD+L EL ++F ++GQL+ R+ W++ F D + +L+GDDPW
Sbjct: 520 GVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQT--RNQWKIAFTDSDGYEMLVGDDPW 577
Query: 863 QEFVNNVGYIKILSPLEVQQM--GKGLS 888
EF V I I S EV+ + K LS
Sbjct: 578 PEFCKMVKKILIYSKEEVKNLKSSKSLS 605
>TAIR|locus:2036288 [details] [associations]
symbol:ARF22 "auxin response factor 22" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 ProtClustDB:CLSN2681760
EMBL:AC023913 EMBL:AY669796 IPI:IPI00545778 PIR:C86468
RefSeq:NP_174699.2 UniGene:At.51186 ProteinModelPortal:Q9C8N7
SMR:Q9C8N7 IntAct:Q9C8N7 EnsemblPlants:AT1G34390.1 GeneID:840341
KEGG:ath:AT1G34390 GeneFarm:3426 TAIR:At1g34390 OMA:NITTNAN
PhylomeDB:Q9C8N7 Genevestigator:Q9C8N7 Uniprot:Q9C8N7
Length = 598
Score = 727 (261.0 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
Identities = 152/361 (42%), Positives = 219/361 (60%)
Query: 45 GEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQ 104
G K + +LW CAGPL +P +G ++ YFPQG+ E V AST +E++ P +LP +
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKP-ICDLPSK 77
Query: 105 LICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLTA 164
L C++ + + + +DE YA++TL P + Q ++P + + N F K LTA
Sbjct: 78 LQCRVIAIQLKVENNSDETYAEITLMPDTTQ-----VVIPTQNENQFRPLVNSFTKVLTA 132
Query: 165 SDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 224
SDTS GGF VP++ A + PPLD SQ P QEL+A DLH N+W+F H +RG P+RHLLT
Sbjct: 133 SDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLT 190
Query: 225 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLXXX 284
TGW+ F ++K+LVAGD ++F+ E +L +GIRRA Q +PSS++S +SM G++
Sbjct: 191 TGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASA 250
Query: 285 XXXXXTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 344
F + Y PR+S +F++ K++ AV + + +VG RF M FE ++ S RRY
Sbjct: 251 KHAFDNQCMFIVVYKPRSS--QFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSERRYF 307
Query: 345 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPLRL 404
GTI G+SD P W S WR+++V WDE + R +VS WEIE L P + P P L
Sbjct: 308 GTIIGVSDFSP-HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHL--MPALNVPRPSLL 364
Query: 405 K 405
K
Sbjct: 365 K 365
Score = 184 (69.8 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
Identities = 71/242 (29%), Positives = 109/242 (45%)
Query: 659 KQVTVDNHVPSAVSHC---ILPQVEQLG----AQQSNVS-ELASLLPPF--PGREYSSYH 708
K++ N + S+ SH IL Q +++G A N+S P R SY
Sbjct: 367 KRLREVNEIGSSSSHLLPPILTQGQEIGQLSVASPMNISLTYRDTTEDVMNPSRLLMSYP 426
Query: 709 GSGDPQ---NNLLFGVSIDSSLMGQNGLPNLKNISSENESLSLPYAASNFTNNVGTDFPL 765
P+ NN + I+ ++ + G N SL P + +G++
Sbjct: 427 VQPMPKLNYNNQMV-TQIEENITTKTGT----NFRLFGVSLVTPSVIKDPIEEIGSEI-- 479
Query: 766 NSDMTTSSCVDESGFLQSSENVDQVN-PPTRTFVKVHKSG-SFGRSLDISKFSSYDELRS 823
S +T +S L+S + TRT KV G + R++D+S + YD+L
Sbjct: 480 -SKLTEGKKFGQSQTLRSPTEIQSKQFSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLIL 538
Query: 824 ELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVGYIKILS----PLE 879
EL +F L+GQL+ R+ W++ F D ++D +L+GDDPW EF N V I I LE
Sbjct: 539 ELEELFDLKGQLQT--RNQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILIFKRGGQKLE 596
Query: 880 VQ 881
VQ
Sbjct: 597 VQ 598
>TAIR|locus:2026145 [details] [associations]
symbol:ARF12 "auxin response factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 EMBL:AY669792 EMBL:AC007454
IPI:IPI00544760 PIR:C86467 RefSeq:NP_174691.2 UniGene:At.51185
ProteinModelPortal:Q9XID4 SMR:Q9XID4 IntAct:Q9XID4
EnsemblPlants:AT1G34310.1 GeneID:840331 KEGG:ath:AT1G34310
GeneFarm:3390 TAIR:At1g34310 eggNOG:NOG264447 PhylomeDB:Q9XID4
ProtClustDB:CLSN2681760 ArrayExpress:Q9XID4 Genevestigator:Q9XID4
GermOnline:AT1G34310 Uniprot:Q9XID4
Length = 593
Score = 725 (260.3 bits), Expect = 3.5e-88, Sum P(2) = 3.5e-88
Identities = 157/366 (42%), Positives = 221/366 (60%)
Query: 45 GEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQ 104
G K + +LW CAGPL +P +G +V YFPQGH E V ST +E++ P +LP +
Sbjct: 19 GSKSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQP-ICDLPSK 77
Query: 105 LICQLHNLTMHADVE--TDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTL 162
L C++ + +H VE +DE YA++TL P + Q ++P + + N F K L
Sbjct: 78 LQCRV--IAIHLKVENNSDETYAEITLMPDTTQ-----VVIPTQNENQFRPLVNSFTKVL 130
Query: 163 TASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHL 222
TASDTS HGGF VP++ A + P LD SQ PAQEL+A DLH N+W+F H +RG P+RHL
Sbjct: 131 TASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHL 190
Query: 223 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLX 282
LTTGW+ F ++K+LVAGD ++F+ E +L +GIRRA Q +PSS++S D M G++
Sbjct: 191 LTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVA 250
Query: 283 XXXXXXXTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRR 342
FT+ Y PR+S +F++ K++ AV + + +VG RF M E ++ S RR
Sbjct: 251 SAKHAFDNQCMFTVVYKPRSS--KFIVSYDKFLDAV-NNKFNVGSRFTMRLEGDDFSERR 307
Query: 343 YMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSP--F 400
GTI G+SD P W S WRS++V WDE T+ +VS W+IE L P + P F
Sbjct: 308 CFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHL--MPAINVPRSF 364
Query: 401 PLRLKR 406
L+ KR
Sbjct: 365 LLKNKR 370
Score = 175 (66.7 bits), Expect = 3.5e-88, Sum P(2) = 3.5e-88
Identities = 35/82 (42%), Positives = 53/82 (64%)
Query: 794 TRTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDREN 852
+RT KV G + GR++D+S + YD+L EL ++F ++GQL+ R+ W++ F D +
Sbjct: 510 SRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQT--RNQWEIAFTDSDE 567
Query: 853 DVLLLGDDPWQEFVNNVGYIKI 874
D +L+GDDPW EF N V I I
Sbjct: 568 DKMLVGDDPWPEFCNMVKKIFI 589
>TAIR|locus:2206717 [details] [associations]
symbol:ARF20 "auxin response factor 20" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC069160 HOGENOM:HOG000241141
eggNOG:NOG264447 ProtClustDB:CLSN2681760 EMBL:AY669795
IPI:IPI00656906 PIR:D86473 RefSeq:NP_174758.2 UniGene:At.51187
ProteinModelPortal:Q9C7I9 SMR:Q9C7I9 IntAct:Q9C7I9 PaxDb:Q9C7I9
PRIDE:Q9C7I9 EnsemblPlants:AT1G35240.1 GeneID:840413
KEGG:ath:AT1G35240 GeneFarm:3424 TAIR:At1g35240 PhylomeDB:Q9C7I9
Genevestigator:Q9C7I9 GermOnline:AT1G35240 Uniprot:Q9C7I9
Length = 590
Score = 705 (253.2 bits), Expect = 4.4e-88, Sum P(2) = 4.4e-88
Identities = 155/387 (40%), Positives = 225/387 (58%)
Query: 45 GEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQ 104
G K + +LW CAGPL +P +G V YFPQG+ E V AST +E++ P +LP +
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQP-ICDLPSK 77
Query: 105 LICQLHNLTMHADVE--TDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTL 162
L C++ + +H VE +DE YA++TL P + Q ++P + + N F K L
Sbjct: 78 LQCRV--IAIHLKVENNSDETYAEITLMPDTTQ-----VVIPTQSENQFRPLVNSFTKVL 130
Query: 163 TASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHL 222
TASDTS +GGF VP++ A + PPL PAQEL+A+DLH N+W+FRH +RG P+RH
Sbjct: 131 TASDTSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHS 186
Query: 223 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLX 282
LTTGW+ F ++K+LV GD ++F+ E +L +GIRRA Q +PSS++S D M G++
Sbjct: 187 LTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIA 246
Query: 283 XXXXXXXTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRR 342
F + Y P S+F++ K++ A+ + + VG RF M FE ++ S RR
Sbjct: 247 SAKHALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAM-NNKFIVGSRFTMRFEGDDFSERR 305
Query: 343 YMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPL 402
Y GTI G++D P W S WRS++V WDE + R +VS WEIE L + + P
Sbjct: 306 YFGTIIGVNDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMS--ALNVPRSS 362
Query: 403 RLKRPWPSGLPSFHGMKDGDMSINSPL 429
LK + F G + G +S+ SP+
Sbjct: 363 LLKNKRLREVNEF-GQEIGQLSVASPM 388
Score = 194 (73.4 bits), Expect = 4.4e-88, Sum P(2) = 4.4e-88
Identities = 51/148 (34%), Positives = 78/148 (52%)
Query: 745 SLSLPYAASNFTNNVGTDFPLNSDMTTSSCVDESGFLQSSENVDQVN-PPTRTFVKVHKS 803
SL++P + +G+D S +T +S L+S + TRT KV
Sbjct: 447 SLAIPLVIKDPIEEIGSDI---SKLTEGKKFGQSQTLRSPIEIQSKQFGSTRTCTKVQMQ 503
Query: 804 G-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPW 862
G + GR++D+S + YD+L EL ++F L+GQL+ R+ W++ F D + +L+GDDPW
Sbjct: 504 GVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQT--RNQWKIAFTDSDGYEMLVGDDPW 561
Query: 863 QEFVNNVGYIKILSPLEVQQM--GKGLS 888
EF V I I S EV+ + K LS
Sbjct: 562 PEFCKMVKKILIYSKEEVKNLKSSKSLS 589
>TAIR|locus:2057609 [details] [associations]
symbol:ETT "ETTIN" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0009850 "auxin
metabolic process" evidence=TAS] [GO:0010158 "abaxial cell fate
specification" evidence=IGI] [GO:0010050 "vegetative phase change"
evidence=IGI;RCA;IMP] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0010051 "xylem and phloem pattern formation" evidence=RCA]
[GO:0048438 "floral whorl development" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=ISS] InterPro:IPR003340
InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009733 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009850 GO:GO:0010050 HOGENOM:HOG000241141
KO:K14486 EMBL:U89296 EMBL:AF007788 EMBL:U78721 EMBL:AF336917
EMBL:AF360313 EMBL:AY056365 EMBL:AB199791 IPI:IPI00527337
PIR:E84750 PIR:T03278 RefSeq:NP_180942.1 UniGene:At.10360
ProteinModelPortal:O23661 SMR:O23661 IntAct:O23661 STRING:O23661
EnsemblPlants:AT2G33860.1 GeneID:817956 KEGG:ath:AT2G33860
GeneFarm:3366 TAIR:At2g33860 eggNOG:NOG315820 InParanoid:O23661
OMA:HESNNES PhylomeDB:O23661 ProtClustDB:CLSN2913114
Genevestigator:O23661 GermOnline:AT2G33860 GO:GO:0010158
Uniprot:O23661
Length = 608
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 186/383 (48%), Positives = 247/383 (64%)
Query: 42 NFAGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNL 101
N AG CL ELWHACAGPL+SLP GS V+YFPQGH EQ + A I Y L
Sbjct: 45 NSAGGGVCL--ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-----DFSAAI--Y-GL 94
Query: 102 PPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVY--LLPAELGAPNKQ------ 153
PP + C++ ++ +HA+ TDEVYAQ++L P S ++ V ++ + G + +
Sbjct: 95 PPHVFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSN 154
Query: 154 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHI 213
+ FCKTLTASDTSTHGGFSVPRRAAE FPPLDYSQ P+QEL+ARDLH EW+FRHI
Sbjct: 155 TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHI 214
Query: 214 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSS 273
+RGQP+RHLLTTGWS FV+ K+LV+GD+VLF+ + +L LG+RRA++ + S +
Sbjct: 215 YRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYN 274
Query: 274 DSMHIGLLXXXXXXXXTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLF 333
+M+ T+S F+I YNP+AS S F+IP K++K V + +GMRF+
Sbjct: 275 QNMNHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYP-FCIGMRFKARV 333
Query: 334 ETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP---L 390
E+E++S RR G I+GISDLDP+RWP S WR + V WD+ A Q RVS WEIEP +
Sbjct: 334 ESEDASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGSI 393
Query: 391 TTFPMYSSPFPLRLKRPWPSGLP 413
+ + + P R + + SG P
Sbjct: 394 SNSGSFVTTGPKRSRIGFSSGKP 416
>TAIR|locus:2057517 [details] [associations]
symbol:ARF10 "auxin response factor 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0048829 "root cap
development" evidence=IGI;IMP] [GO:0051301 "cell division"
evidence=IGI] [GO:0009734 "auxin mediated signaling pathway"
evidence=IMP] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=IMP] [GO:0009743 "response to carbohydrate
stimulus" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0031540 "regulation of anthocyanin biosynthetic
process" evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048441 "petal development" evidence=IMP] [GO:0048442 "sepal
development" evidence=IMP] [GO:0048589 "developmental growth"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009734 GO:GO:0051301 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0048589 GO:GO:0009743
GO:GO:0048441 GO:GO:0048442 GO:GO:0010154 GO:GO:0035198
GO:GO:0048366 GO:GO:0007389 EMBL:AF099735 EMBL:AC006283
EMBL:AF325073 EMBL:AF336919 EMBL:EU550097 EMBL:EU550098
EMBL:EU550099 EMBL:EU550100 EMBL:EU550101 EMBL:EU550102
EMBL:EU550103 EMBL:EU550104 EMBL:EU550105 EMBL:EU550106
EMBL:EU550107 EMBL:EU550108 EMBL:EU550109 EMBL:EU550110
EMBL:EU550111 EMBL:EU550112 EMBL:EU550113 EMBL:EU550114
EMBL:EU550115 EMBL:EU550116 EMBL:EU550117 EMBL:EU550118
EMBL:EU550119 EMBL:AK228534 IPI:IPI00530405 PIR:G84683
RefSeq:NP_180402.1 UniGene:At.13730 ProteinModelPortal:Q9SKN5
SMR:Q9SKN5 IntAct:Q9SKN5 STRING:Q9SKN5 PRIDE:Q9SKN5
EnsemblPlants:AT2G28350.1 GeneID:817382 KEGG:ath:AT2G28350
GeneFarm:3383 TAIR:At2g28350 eggNOG:NOG315592 InParanoid:Q9SKN5
OMA:ERESGRC PhylomeDB:Q9SKN5 ProtClustDB:CLSN2913131
ArrayExpress:Q9SKN5 Genevestigator:Q9SKN5 GermOnline:AT2G28350
GO:GO:0031540 Uniprot:Q9SKN5
Length = 693
Score = 533 (192.7 bits), Expect = 1.5e-82, Sum P(3) = 1.5e-82
Identities = 108/223 (48%), Positives = 145/223 (65%)
Query: 46 EKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQL 105
++K L+ +LWHACAG +V +P + S V YF QGH+E A D H P +PP +
Sbjct: 3 QEKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPP----DFHAPR---VPPLI 55
Query: 106 ICQLHNLTMHADVETDEVYAQMTLQPLSPQE---QKDVYL---LPAELGAPN-KQPTNYF 158
+C++ ++ AD ETDEV+A++TL PL + + D L P+ G N K+ F
Sbjct: 56 LCRVVSVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASF 115
Query: 159 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQP 218
KTLT SD + GGFSVPR AE +FP LDYS PP Q +IA+D+H WKFRHI+RG P
Sbjct: 116 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTP 175
Query: 219 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATR 261
+RHLLTTGWS FV+ K+L+AGDS++F+ +E L +GIRRA R
Sbjct: 176 RRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR 218
Score = 253 (94.1 bits), Expect = 1.5e-82, Sum P(3) = 1.5e-82
Identities = 57/130 (43%), Positives = 77/130 (59%)
Query: 294 FTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGISD 352
F + Y PRAS EF + A V++ R GMRF+M FETE+SS + +MGT++ +
Sbjct: 287 FEVVYYPRASTPEFCVKAAD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQV 345
Query: 353 LDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYSSPFPLRLK-R-PWP 409
DP+RWPNS WR ++V WDE + RVS W +E ++ P ++ SPF R K R P P
Sbjct: 346 ADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSPRKKIRIPQP 405
Query: 410 SGLPSFHGMK 419
P FHG K
Sbjct: 406 FEFP-FHGTK 414
Score = 87 (35.7 bits), Expect = 1.5e-82, Sum P(3) = 1.5e-82
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 802 KSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDP 861
+S GR+LD+S SY EL +LA MF +E + D +V+ D + +GD+P
Sbjct: 588 ESEDVGRTLDLSVIGSYQELYRKLAEMFHIE-ERSDLLT---HVVYRDANGVIKRIGDEP 643
Query: 862 WQEFV 866
+ +F+
Sbjct: 644 FSDFM 648
Score = 49 (22.3 bits), Expect = 3.7e-61, Sum P(3) = 3.7e-61
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 239 GDSVLFIWNEKNQLLLGIRRATRPQTVM--PSSVLSSD 274
G+S+ ++ N+ N GI+ A + Q + PS L SD
Sbjct: 428 GESMCYLSNDNNNAPAGIQGARQAQQLFGSPSPSLLSD 465
>TAIR|locus:2126460 [details] [associations]
symbol:ARF16 "auxin response factor 16" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0048829 "root cap development"
evidence=IGI;IMP] [GO:0051301 "cell division" evidence=IGI]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0051301 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL161576 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0035198 GO:GO:0007389
HOGENOM:HOG000241141 eggNOG:NOG315592 EMBL:AL078464 EMBL:AY059792
EMBL:AY091198 EMBL:EU550120 EMBL:EU550121 EMBL:EU550122
EMBL:EU550123 EMBL:EU550124 EMBL:EU550125 EMBL:EU550126
EMBL:EU550127 EMBL:EU550128 EMBL:EU550129 EMBL:EU550130
EMBL:EU550131 EMBL:EU550132 EMBL:EU550133 EMBL:EU550134
EMBL:EU550135 EMBL:EU550136 EMBL:EU550137 EMBL:EU550138
EMBL:EU550139 EMBL:EU550140 EMBL:EU550141 EMBL:EU550142
EMBL:EU550143 IPI:IPI00528149 PIR:T08984 RefSeq:NP_567841.1
UniGene:At.3365 ProteinModelPortal:Q93YR9 SMR:Q93YR9 IntAct:Q93YR9
STRING:Q93YR9 EnsemblPlants:AT4G30080.1 GeneID:829131
KEGG:ath:AT4G30080 GeneFarm:3406 TAIR:At4g30080 InParanoid:Q93YR9
OMA:GHAENAY PhylomeDB:Q93YR9 ProtClustDB:CLSN2917636
Genevestigator:Q93YR9 GermOnline:AT4G30080 Uniprot:Q93YR9
Length = 670
Score = 525 (189.9 bits), Expect = 1.1e-77, Sum P(3) = 1.1e-77
Identities = 107/220 (48%), Positives = 142/220 (64%)
Query: 45 GEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQ 104
G +K L+ +LWHACAG +V +PP+ S+V YFPQGH+E VD N P +PP
Sbjct: 11 GTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDC----VD--FGNLP-IPPM 63
Query: 105 LICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELG---APNKQPTNYFCKT 161
++C++ + AD E+DEV+A++ L PL E D E N + T F KT
Sbjct: 64 VLCRVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAKT 123
Query: 162 LTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRH 221
LT SD + GGFSVPR AE +FP LDY+ PP Q ++A+D+H + WKFRHI+RG P+RH
Sbjct: 124 LTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRH 183
Query: 222 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATR 261
LLTTGWS FV+ K+LVAGDS++F+ E L +GIRRA R
Sbjct: 184 LLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKR 223
Score = 213 (80.0 bits), Expect = 1.1e-77, Sum P(3) = 1.1e-77
Identities = 49/128 (38%), Positives = 73/128 (57%)
Query: 294 FTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGISD 352
F + Y PRAS SEF + A +A GMRF+M FETE+SS + +MGT++ ++
Sbjct: 289 FEVVYYPRASTSEFCVK-ALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNV 347
Query: 353 LDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF-PMYSSPF-PLRLKRPWPS 410
DP+RWPNS WR ++V WDE + RV+ W +E ++ P+ + F P R K P
Sbjct: 348 SDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQ 407
Query: 411 GLPSFHGM 418
P ++ +
Sbjct: 408 H-PDYNNL 414
Score = 90 (36.7 bits), Expect = 1.1e-77, Sum P(3) = 1.1e-77
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 802 KSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDP 861
+S GR+LD+S SY+EL +L+ MFG++ + S +++ D + G++P
Sbjct: 592 ESDDVGRTLDLSVLGSYEELSRKLSDMFGIK---KSEMLSS--VLYRDASGAIKYAGNEP 646
Query: 862 WQEFVNNVGYIKILS 876
+ EF+ + IL+
Sbjct: 647 FSEFLKTARRLTILT 661
>TAIR|locus:2008991 [details] [associations]
symbol:ARF13 "AUXIN RESPONSE FACTOR 13" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GO:GO:0005634 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 IPI:IPI00938986 RefSeq:NP_001154393.1
UniGene:At.51184 ProteinModelPortal:F4HT52 SMR:F4HT52 PRIDE:F4HT52
EnsemblPlants:AT1G34170.3 GeneID:840316 KEGG:ath:AT1G34170
OMA:PEFCNMA ArrayExpress:F4HT52 Uniprot:F4HT52
Length = 546
Score = 506 (183.2 bits), Expect = 1.6e-75, Sum P(3) = 1.6e-75
Identities = 106/258 (41%), Positives = 149/258 (57%)
Query: 47 KKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLI 106
K + +LW+ CAGPL LP G +V YFPQGH E + ST E+D HI +LP +L
Sbjct: 19 KTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELD-HIRPIFDLPSKLR 77
Query: 107 CQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYF-CKTLTAS 165
C++ + D TDEVYAQ++L P + + ++ ++P YF K LTAS
Sbjct: 78 CRVVAIDRKVDKNTDEVYAQISLMPDTTE------VMTHNTTMDTRRPIVYFFSKILTAS 131
Query: 166 DTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 225
D S GG +P++ A + FPPLD SQ Q L+A+DL+ EW F+H+FRG P+RH+ T+
Sbjct: 132 DVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTS 191
Query: 226 G--WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLXX 283
G WSVF + KRL+ GD + + E +L GIRRA Q +PSSV+S++ M G++
Sbjct: 192 GGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIAS 251
Query: 284 XXXXXXTNSRFTIFYNPR 301
T F + Y PR
Sbjct: 252 VVNAFKTKCMFNVVYKPR 269
Score = 154 (59.3 bits), Expect = 1.6e-75, Sum P(3) = 1.6e-75
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 330 RMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP 389
RM FE ++ S +RY GTI G++D+ P W +S WRS+KV WDE + R +VS W+IE
Sbjct: 269 RMQFEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEH 327
Query: 390 LTTFPMYSSPFPLRLKRPW 408
L S L+ K+ W
Sbjct: 328 LIPSSDISQS-SLKKKKHW 345
Score = 150 (57.9 bits), Expect = 1.6e-75, Sum P(3) = 1.6e-75
Identities = 31/86 (36%), Positives = 51/86 (59%)
Query: 799 KVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLL 857
KVH G + R++D++ Y++L +L +F L+ +L R+ W++VF + E +L+
Sbjct: 437 KVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRT--RNQWEIVFTNNEGAEMLV 494
Query: 858 GDDPWQEFVNNVGYIKILSPLEVQQM 883
GDDPW EF N I I S E+++M
Sbjct: 495 GDDPWPEFCNMAKRIFICSKEEIKKM 520
Score = 41 (19.5 bits), Expect = 4.2e-64, Sum P(3) = 4.2e-64
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 755 FTNNVGTDFPLNSDMTTSSC-VDESGFLQSSENVDQVNPPTRTF 797
FTNN G + + D C + + F+ S E + ++ + F
Sbjct: 484 FTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEIKKMKLKNKFF 527
>TAIR|locus:2029436 [details] [associations]
symbol:ARF17 "auxin response factor 17" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=TAS] [GO:0048830 "adventitious root development"
evidence=IMP] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR003340 InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0009555
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0048830 GO:GO:0009653
EMBL:AC009243 EMBL:AC012193 EMBL:AY056184 EMBL:BT002749
EMBL:EU550144 EMBL:EU550145 EMBL:EU550146 EMBL:EU550147
EMBL:EU550148 EMBL:EU550149 EMBL:EU550150 EMBL:EU550151
EMBL:EU550152 EMBL:EU550153 EMBL:EU550154 EMBL:EU550155
EMBL:EU550156 EMBL:EU550157 EMBL:EU550158 EMBL:EU550159
EMBL:EU550160 EMBL:EU550161 EMBL:EU550162 EMBL:EU550163
EMBL:EU550164 EMBL:EU550165 EMBL:EU550166 EMBL:EU550167
IPI:IPI00522722 PIR:D96808 RefSeq:NP_565161.1 UniGene:At.26363
ProteinModelPortal:Q84WU6 SMR:Q84WU6 IntAct:Q84WU6 STRING:Q84WU6
PRIDE:Q84WU6 EnsemblPlants:AT1G77850.1 GeneID:844120
KEGG:ath:AT1G77850 GeneFarm:3413 TAIR:At1g77850 eggNOG:NOG325741
OMA:IWRACAG PhylomeDB:Q84WU6 ProtClustDB:CLSN2689276
Genevestigator:Q84WU6 GermOnline:AT1G77850 Uniprot:Q84WU6
Length = 585
Score = 417 (151.9 bits), Expect = 2.9e-49, Sum P(3) = 2.9e-49
Identities = 89/210 (42%), Positives = 126/210 (60%)
Query: 54 LWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQLHNLT 113
+W ACAG V +P + SRV YFPQGH E + +P+ + P C + ++
Sbjct: 20 IWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLST-----LPSSTSPVP---CIITSIQ 71
Query: 114 MHADVETDEVYAQMTLQPLSPQEQKDV-YL----LPAELGAPNKQPTNYFCKTLTASDTS 168
+ AD TDEV+A + LQP++ Q+ Y ++ NK T F K LT SD +
Sbjct: 72 LLADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTT--FAKILTPSDAN 129
Query: 169 THGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWS 228
GGFSVPR A+ VFP L++ PP Q+L D+H W FRHI+RG P+RHLLTTGWS
Sbjct: 130 NGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWS 189
Query: 229 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRR 258
FV++K+L+AGDSV+F+ +++ +G+RR
Sbjct: 190 KFVNSKKLIAGDSVVFMRKSADEMFIGVRR 219
Score = 149 (57.5 bits), Expect = 2.9e-49, Sum P(3) = 2.9e-49
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 294 FTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGI-S 351
F + + P A SEFV+ A+ V++ + G R +M ETE+SS + + G ++
Sbjct: 284 FEVVFYPAAGWSEFVVR-AEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQ 342
Query: 352 DLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFP--LRLKRPWP 409
+ P W S W+ +++ WDE + RV+ W++E +PFP RLK P P
Sbjct: 343 ETGP--WRGSPWKQLQITWDEPEILQNVKRVNPWQVEIAAHATQLHTPFPPAKRLKYPQP 400
Query: 410 SGLPSFHGMKDGDM 423
G F DG++
Sbjct: 401 GG--GFLSGDDGEI 412
Score = 37 (18.1 bits), Expect = 2.9e-49, Sum P(3) = 2.9e-49
Identities = 25/97 (25%), Positives = 41/97 (42%)
Query: 733 LPNLKNISSENESLSLPYAASNFTNNVGTDFPLNSDMTTSSCVDESGFLQSSENVDQVNP 792
LP+L +S+E + P + + N+ T+ +D+ V G L N Q+
Sbjct: 474 LPDLGKVSTEMMNFGSPPSDNLSPNSNTTNLSSGNDL-----VGNRGPLSKKVNSIQLFG 528
Query: 793 PTRTFVKVHKSGSFGRSL---DISKFSSYDELRSELA 826
T + +SG L D SK SS +E + L+
Sbjct: 529 KIITVEEHSESGPAESGLCEEDGSKESSDNETQLSLS 565
>TAIR|locus:2037169 [details] [associations]
symbol:ARF23 "auxin response factor 23" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
HOGENOM:HOG000241141 EMBL:AC022314 IPI:IPI00526589 PIR:E96503
RefSeq:NP_175062.1 UniGene:At.52022 ProteinModelPortal:Q9LP07
SMR:Q9LP07 EnsemblPlants:AT1G43950.1 GeneID:840994
KEGG:ath:AT1G43950 GeneFarm:3427 TAIR:At1g43950 OMA:PTENENQ
PhylomeDB:Q9LP07 Genevestigator:Q9LP07 GermOnline:AT1G43950
Uniprot:Q9LP07
Length = 222
Score = 437 (158.9 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 96/215 (44%), Positives = 132/215 (61%)
Query: 45 GEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQ 104
G K + +LW CAGPL +P +G +V YFPQGH E V AST +E++ PN +LP +
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNC-DLPSK 77
Query: 105 LICQLHNLTMHADVE--TDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTL 162
L C++ + +H VE +DE Y ++TL P + Q ++P E + N F K L
Sbjct: 78 LQCRV--IAIHLKVENNSDETYVEITLMPDTTQ-----VVIPTENENQFRPIVNSFTKVL 130
Query: 163 TASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHL 222
TASDTS G FSVP + A + PPLD SQ PAQELIA DLH N+W+F+H +R P+
Sbjct: 131 TASDTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD- 188
Query: 223 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIR 257
TTGW+ F ++K+LV GD ++F E +L +GIR
Sbjct: 189 -TTGWNAFTTSKKLVVGDVIVFARGETGELRVGIR 222
>TAIR|locus:2079537 [details] [associations]
symbol:NGA2 "NGATHA2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AL138642 HSSP:Q9ZWM9 HOGENOM:HOG000239355
ProtClustDB:CLSN2682823 EMBL:AK117646 EMBL:BT025866 EMBL:AY085197
IPI:IPI00523321 PIR:T47989 RefSeq:NP_191756.1 UniGene:At.34201
ProteinModelPortal:Q9M268 SMR:Q9M268 EnsemblPlants:AT3G61970.1
GeneID:825370 KEGG:ath:AT3G61970 TAIR:At3g61970 eggNOG:NOG273145
InParanoid:Q9M268 OMA:SSSMERE PhylomeDB:Q9M268
Genevestigator:Q9M268 Uniprot:Q9M268
Length = 299
Score = 151 (58.2 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 42/132 (31%), Positives = 67/132 (50%)
Query: 135 QEQKDVYLLPAELGAPNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPP 194
QE K+ P E + + + + F K +T SD +P++ AE+ FP LD S T
Sbjct: 3 QEDKEK---PIEEASSSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTND 58
Query: 195 AQELIARDLHD---NEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQ 251
+ + + + D N W+FR+ + + +++T GWS FV K+L AGD V F + N+
Sbjct: 59 SNKGLLLNFEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNK 118
Query: 252 LLLGIRRATRPQ 263
L I RP+
Sbjct: 119 DKLYIDWRRRPK 130
Score = 48 (22.0 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 726 SLMGQNGLPNLKNISSENESLSLPYAAS 753
S++G L L+ +SS++ESL AAS
Sbjct: 251 SMVGAGSLLQLRLVSSDDESLVAMEAAS 278
>UNIPROTKB|Q6K846 [details] [associations]
symbol:IAA9 "Auxin-responsive protein IAA9" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
ProtClustDB:CLSN2695987 EMBL:AC069158 EMBL:AP004240 EMBL:AK073365
RefSeq:NP_001048437.1 UniGene:Os.23256
EnsemblPlants:LOC_Os02g56120.1 EnsemblPlants:LOC_Os02g56120.2
GeneID:4331061 KEGG:dosa:Os02t0805100-01 KEGG:osa:4331061
Gramene:Q6K846 eggNOG:NOG253641 OMA:ARSRACG Uniprot:Q6K846
Length = 182
Score = 134 (52.2 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 34/88 (38%), Positives = 50/88 (56%)
Query: 797 FVKVHKSG-SFGRSLDISKFSSYDELRSELARMF------GLEGQLEDPQ--RSGWQLVF 847
+VKV K G + GR +D++ SSYDEL + LARMF G + D +G + +
Sbjct: 94 YVKVKKEGDAIGRKVDLALHSSYDELAATLARMFPTNDHQGEKKMANDDHGDAAGPVVTY 153
Query: 848 VDRENDVLLLGDDPWQEFVNNVGYIKIL 875
D + D +L+GD PW +F +V +KIL
Sbjct: 154 EDGDGDWMLVGDVPWDDFARSVKRLKIL 181
>TAIR|locus:2090527 [details] [associations]
symbol:IAA31 "indole-3-acetic acid inducible 31"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0048367 "shoot system development" evidence=IMP]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0009630 GO:GO:0022621 EMBL:AB022219 HOGENOM:HOG000005696
EMBL:AY054274 EMBL:BT000543 IPI:IPI00540266 RefSeq:NP_188387.1
UniGene:At.22356 IntAct:Q8H174 EnsemblPlants:AT3G17600.1
GeneID:821026 KEGG:ath:AT3G17600 GeneFarm:3238 TAIR:At3g17600
eggNOG:NOG267119 InParanoid:Q8H174 OMA:KITRPER PhylomeDB:Q8H174
ProtClustDB:CLSN2913488 Genevestigator:Q8H174 GermOnline:AT3G17600
Uniprot:Q8H174
Length = 158
Score = 134 (52.2 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 41/140 (29%), Positives = 66/140 (47%)
Query: 740 SSENESLSLPYAASNFTNNVGTDFP-LNSDMTTSSCVDESGFLQSSENVDQVNPPTRTFV 798
SS N SLSL + +++ D+P + S + + + L+ ++ T FV
Sbjct: 25 SSVNLSLSLTFPSTSPQREARQDWPPIKSRLRDT--LKGRRLLRRGDD-------TSLFV 75
Query: 799 KVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLL 857
KV+ G GR LD+ FS Y+ L L+ MF + R L + D++ D +++
Sbjct: 76 KVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMMV 135
Query: 858 GDDPWQEFVNNVGYIKILSP 877
GD PW F+ V +KI P
Sbjct: 136 GDIPWDMFLETVRRLKITRP 155
>TAIR|locus:2051154 [details] [associations]
symbol:IAA13 "auxin-induced protein 13" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC002332 HOGENOM:HOG000238261
UniGene:At.10797 ProtClustDB:CLSN2681806 EMBL:U18415 EMBL:AF332399
EMBL:BT005874 EMBL:AY085194 EMBL:Z26543 IPI:IPI00536192
IPI:IPI00548760 PIR:S58499 RefSeq:NP_001118434.1 RefSeq:NP_180889.1
RefSeq:NP_850205.1 UniGene:At.74387 IntAct:Q38831 STRING:Q38831
EnsemblPlants:AT2G33310.2 GeneID:817894 KEGG:ath:AT2G33310
GeneFarm:3160 TAIR:At2g33310 eggNOG:NOG308656 InParanoid:Q38831
OMA:LEDMFFR PhylomeDB:Q38831 Genevestigator:Q38831
GermOnline:AT2G33310 Uniprot:Q38831
Length = 247
Score = 134 (52.2 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 37/115 (32%), Positives = 58/115 (50%)
Query: 797 FVKVHKSG-SFGRSLDISKFSSYDELRSELARMF--------GLEGQLEDPQR-----SG 842
F+KV+ G + GR +D++ SSY+ L L MF GL Q P R S
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 190
Query: 843 WQLVFVDRENDVLLLGDDPWQEFVNNVGYIKILSPLEVQQMGKGLSPVTSGPGQR 897
+ L + D+E D +L+GD PW+ F+N+V ++++ E GL+ P +R
Sbjct: 191 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEAN----GLAARNQEPNER 241
Score = 53 (23.7 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 164 ASDTSTHGGFSVPRRAAEKV-FPPL 187
A+D+++H G S PR +++ V +PP+
Sbjct: 59 AADSASHAGSSPPRSSSQVVGWPPI 83
>TAIR|locus:2098023 [details] [associations]
symbol:IAA30 "indole-3-acetic acid inducible 30"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;RCA;TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0010262 "somatic embryogenesis" evidence=IMP] [GO:0010583
"response to cyclopentenone" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 GO:GO:0048364 GO:GO:0009630
GO:GO:0010262 EMBL:AL138651 PIR:T48002 HOGENOM:HOG000005696
ProtClustDB:CLSN2683572 EMBL:AY669801 IPI:IPI00529772
RefSeq:NP_191769.1 UniGene:At.50305 IntAct:Q9M1R4 STRING:Q9M1R4
EnsemblPlants:AT3G62100.1 GeneID:825383 KEGG:ath:AT3G62100
GeneFarm:3237 TAIR:At3g62100 eggNOG:NOG324376 InParanoid:Q9M1R4
OMA:EMMIMEE PhylomeDB:Q9M1R4 Genevestigator:Q9M1R4
GermOnline:AT3G62100 Uniprot:Q9M1R4
Length = 172
Score = 127 (49.8 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 44/171 (25%), Positives = 79/171 (46%)
Query: 709 GSGDPQNNLLFGVSIDSSLMGQNGLPNLKNISSENESLSLPYAASNFTNNVGTDFPLNSD 768
G G ++ S S+ G + N +N+S++ L L + +S+ G D N +
Sbjct: 2 GRGRSSSSSSIESSCKSNPFGVSS-SNTRNLSTDLR-LGLSFGSSSGQYYNGGD---NHE 56
Query: 769 MTTSSCVDESGFLQSSENVDQVNPPTRTFVKVHKSG-SFGRSLDISKFSSYDELRSELAR 827
+E ++ E ++ N +VKV+ G GR +D+ + Y +L + L
Sbjct: 57 YDGVGAAEEMMIMEEEEQ-NECNSVGSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDY 115
Query: 828 MFG---LEGQLEDP-QRSGWQLVFVDRENDVLLLGDDPWQEFVNNVGYIKI 874
MF L + ED L + D+E D +++GD PW+ F+++V +KI
Sbjct: 116 MFNASILWAEEEDMCSEKSHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKI 166
>TAIR|locus:2041404 [details] [associations]
symbol:NGA1 "NGATHA1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC004411
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 GO:GO:0048366 EMBL:AC005310 HSSP:Q9ZWM9 EMBL:AK118045
EMBL:BT008534 IPI:IPI00537675 PIR:T02200 RefSeq:NP_566089.1
UniGene:At.36441 ProteinModelPortal:O82799 SMR:O82799 IntAct:O82799
STRING:O82799 EnsemblPlants:AT2G46870.1 GeneID:819300
KEGG:ath:AT2G46870 TAIR:At2g46870 eggNOG:NOG237610
HOGENOM:HOG000239355 InParanoid:O82799 OMA:MECGESG PhylomeDB:O82799
ProtClustDB:CLSN2682823 Genevestigator:O82799 Uniprot:O82799
Length = 310
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 36/111 (32%), Positives = 55/111 (49%)
Query: 135 QEQKDVYLLPAELGAPNKQPTNY-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTP 193
+++++ L E GA + F K +T SD +P++ AE+ FP LD S
Sbjct: 11 EDEEEAKPLAEEEGAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNE 69
Query: 194 PAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 244
L DL W+FR+ + + +++T GWS FV K+L AGD V F
Sbjct: 70 KGLLLNFEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSF 120
>TAIR|locus:2197838 [details] [associations]
symbol:IAA12 "indole-3-acetic acid inducible 12"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009733 "response to auxin
stimulus" evidence=IGI] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010051 "xylem and phloem
pattern formation" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0048364 "root
development" evidence=IMP] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0010051 EMBL:AC002376 GO:GO:0009880 HOGENOM:HOG000238261
EMBL:U18414 EMBL:AF332398 EMBL:AY065240 EMBL:AY096535 EMBL:AY088042
IPI:IPI00527949 PIR:S58498 RefSeq:NP_171949.1 UniGene:At.10466
UniGene:At.10797 IntAct:Q38830 STRING:Q38830 PRIDE:Q38830
DNASU:839495 EnsemblPlants:AT1G04550.2 GeneID:839495
KEGG:ath:AT1G04550 GeneFarm:3159 TAIR:At1g04550 eggNOG:NOG330636
InParanoid:Q38830 KO:K14484 OMA:WKERGRI PhylomeDB:Q38830
ProtClustDB:CLSN2681806 Genevestigator:Q38830 Uniprot:Q38830
Length = 239
Score = 136 (52.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 40/114 (35%), Positives = 60/114 (52%)
Query: 789 QVNPPTRT--FVKVHKSG-SFGRSLDISKFSSYDELRSELARMF-GLEG----QLEDPQR 840
+VNP + FVKV+ G GR +D+ SSY+ L L MF G+ G + P R
Sbjct: 116 KVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLR 175
Query: 841 -----SGWQLVFVDRENDVLLLGDDPWQEFVNNVGYIKILSPLEVQQMGKGLSP 889
S + L + D+E D +L+GD PW+ F+N+V ++I+ E GL+P
Sbjct: 176 LLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEAS----GLAP 225
Score = 43 (20.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 164 ASDTSTHGGFSVPRRAAEKVFPPL 187
++++S+H G S PR + +PP+
Sbjct: 53 SAESSSHQGASPPRSSQVVGWPPI 76
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 33/89 (37%), Positives = 47/89 (52%)
Query: 158 FCKTLTASDTSTHGGFSVPRRAAEKVFP-PLDYSQTPPAQELIA-RDLHDNEWKFRHIFR 215
F KT+T SD +P+ AEK FP PL + L+ D++ W+FR+ +
Sbjct: 183 FEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYW 242
Query: 216 GQPKRHLLTTGWSVFVSAKRLVAGDSVLF 244
+ ++LT GWS FV KRL AGD + F
Sbjct: 243 NSSQSYVLTKGWSRFVKEKRLCAGDLISF 271
>TAIR|locus:2200950 [details] [associations]
symbol:NGA3 "NGATHA3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
HSSP:Q9ZWM9 EMBL:AC007323 eggNOG:NOG237610 HOGENOM:HOG000239355
EMBL:BX814729 IPI:IPI00536920 PIR:B86141 RefSeq:NP_171611.1
UniGene:At.49492 ProteinModelPortal:Q9MAN1 SMR:Q9MAN1 STRING:Q9MAN1
PRIDE:Q9MAN1 EnsemblPlants:AT1G01030.1 GeneID:839321
KEGG:ath:AT1G01030 TAIR:At1g01030 InParanoid:Q9MAN1 OMA:RNIVGSE
PhylomeDB:Q9MAN1 ProtClustDB:CLSN2912766 Genevestigator:Q9MAN1
Uniprot:Q9MAN1
Length = 358
Score = 141 (54.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 38/116 (32%), Positives = 57/116 (49%)
Query: 150 PNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWK 209
P + + F K +T SD +P++ AE+ FP LD S L +D + W+
Sbjct: 48 PPPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWR 106
Query: 210 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF---IWNEKNQLLLGIRRATRP 262
FR+ + + +++T GWS FV K+L AGD V F I +E + L I RP
Sbjct: 107 FRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHRP 162
>TAIR|locus:2117007 [details] [associations]
symbol:NGA4 "NGATHA4" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AF096370 EMBL:AL161492 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:FJ873734 EMBL:BT029520 EMBL:AB493670 IPI:IPI00543194
PIR:T01944 RefSeq:NP_192059.4 UniGene:At.34418
ProteinModelPortal:O82595 SMR:O82595 STRING:O82595 PRIDE:O82595
EnsemblPlants:AT4G01500.1 GeneID:826750 KEGG:ath:AT4G01500
TAIR:At4g01500 eggNOG:NOG287578 InParanoid:O82595 OMA:YSSERRE
Genevestigator:O82595 Uniprot:O82595
Length = 333
Score = 136 (52.9 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 36/110 (32%), Positives = 55/110 (50%)
Query: 145 AELGAPNKQPTNYFC----------KTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPP 194
AE+ A + TNYF K LT SD +P++ AE FP L+ +Q
Sbjct: 13 AEIRASSSDHTNYFYSSERREHMFDKVLTPSDVGKLNRLVIPKQHAENFFP-LEDNQNGT 71
Query: 195 AQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 244
+ +D + W+FR+ + + +++T GWS FV K+L AGD+V F
Sbjct: 72 VLDF--QDKNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSF 119
>TAIR|locus:2080782 [details] [associations]
symbol:AT3G11580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009062
"fatty acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC008153 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:AJ441076 EMBL:AK175281 EMBL:BT029371 IPI:IPI00539345
IPI:IPI00547561 RefSeq:NP_187765.2 RefSeq:NP_850559.1
UniGene:At.39724 ProteinModelPortal:Q8RYD3 SMR:Q8RYD3
EnsemblPlants:AT3G11580.1 GeneID:820331 KEGG:ath:AT3G11580
TAIR:At3g11580 eggNOG:NOG285931 InParanoid:Q8RYD3 OMA:CHGDAVE
PhylomeDB:Q8RYD3 ProtClustDB:CLSN2918062 Genevestigator:Q8RYD3
Uniprot:Q8RYD3
Length = 267
Score = 129 (50.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 41/136 (30%), Positives = 63/136 (46%)
Query: 153 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPL----------DYSQTPPAQELIARD 202
Q + F K+LT SD +P++ AEK FP D + T L D
Sbjct: 24 QRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFED 83
Query: 203 LHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQLLLGIRRAT 260
WKFR+ + + ++LT GWS +V K L AGD V F + + ++L +G RR
Sbjct: 84 ESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRRRG 143
Query: 261 RPQTVMPSSVLSSDSM 276
+ SV+S +++
Sbjct: 144 EASSSPAVSVVSQEAL 159
>TAIR|locus:2041324 [details] [associations]
symbol:IAA20 "indole-3-acetic acid inducible 20"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0009647 "skotomorphogenesis" evidence=IMP]
[GO:0010588 "cotyledon vascular tissue pattern formation"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
EMBL:AC004411 GO:GO:0009630 GO:GO:0009647 GO:GO:0010588
EMBL:AK117233 EMBL:AF348576 EMBL:U49076 IPI:IPI00547197 PIR:T02188
RefSeq:NP_182222.1 UniGene:At.10480 IntAct:O24410 STRING:O24410
DNASU:819313 EnsemblPlants:AT2G46990.1 GeneID:819313
KEGG:ath:AT2G46990 GeneFarm:3236 TAIR:At2g46990 eggNOG:NOG254610
HOGENOM:HOG000005696 InParanoid:O24410 OMA:KISRANY PhylomeDB:O24410
ProtClustDB:CLSN2683572 Genevestigator:O24410 GermOnline:AT2G46990
Uniprot:O24410
Length = 175
Score = 119 (46.9 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 43/166 (25%), Positives = 74/166 (44%)
Query: 720 GVSIDSSLMGQNGLPNLKNISSENESLSLPYAAS-NFTNNVGTDFPLNSDM---TTSSCV 775
G S SS + + N SS +LS +F + GT + N + V
Sbjct: 4 GRSSSSSSIESSSKSNPFGASSSTRNLSTDLRLGLSFGTSSGTQY-FNGGYGYSVAAPAV 62
Query: 776 DESGFLQS--SENVDQVNPPTRTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFG-- 830
+++ ++ + E ++ N +VKV+ G GR +D+ + Y +L L MF
Sbjct: 63 EDAEYVAAVEEEEENECNSVGSFYVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNAS 122
Query: 831 -LEGQLEDP-QRSGWQLVFVDRENDVLLLGDDPWQEFVNNVGYIKI 874
L + ED L + D+E D +++GD PW+ F++ V +KI
Sbjct: 123 ILWAEEEDMCNEKSHVLTYADKEGDWMMVGDVPWEMFLSTVRRLKI 168
>TAIR|locus:2164215 [details] [associations]
symbol:DPA4 "DEVELOPMENT-RELATED PcG TARGET IN THE APEX
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010358 "leaf shaping" evidence=IGI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048366 "leaf development" evidence=IGI] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010073 EMBL:AB006700 GO:GO:0010358
HSSP:Q9ZWM9 HOGENOM:HOG000239355 IPI:IPI00517655 IPI:IPI00891280
RefSeq:NP_001119177.1 RefSeq:NP_196243.2 UniGene:At.54745
ProteinModelPortal:Q9FNI3 SMR:Q9FNI3 EnsemblPlants:AT5G06250.2
GeneID:830512 KEGG:ath:AT5G06250 TAIR:At5g06250 eggNOG:NOG256843
InParanoid:Q9FNI3 OMA:LECQMDE PhylomeDB:Q9FNI3
ProtClustDB:CLSN2702250 Genevestigator:Q9FNI3 Uniprot:Q9FNI3
Length = 282
Score = 127 (49.8 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 158 FCKTLTASDTSTHGGFSVPRRAAEKVFP---------PLDYSQTPPAQELIARDLHDNEW 208
F K+LT SD +P++ AEK FP D S + L D W
Sbjct: 46 FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKSW 105
Query: 209 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQLLLGIRRATRPQTVM 266
+FR+ + + ++LT GWS FV K+L GD V F + + +L +G RR + +
Sbjct: 106 RFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRRRGQGSS-- 163
Query: 267 PSSVLSSDS 275
SSV +++S
Sbjct: 164 -SSVAATNS 171
>TAIR|locus:2039165 [details] [associations]
symbol:ABS2 "ABNORMAL SHOOT 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0080167 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC007017 EMBL:AC007135
HSSP:Q9ZWM9 HOGENOM:HOG000239355 EMBL:AK117587 EMBL:AJ441075
IPI:IPI00522172 IPI:IPI00531123 PIR:F84776 RefSeq:NP_181152.2
RefSeq:NP_850260.1 UniGene:At.23308 ProteinModelPortal:Q8GYJ2
SMR:Q8GYJ2 PaxDb:Q8GYJ2 EnsemblPlants:AT2G36080.1 GeneID:818181
KEGG:ath:AT2G36080 TAIR:At2g36080 eggNOG:NOG253490
InParanoid:Q8GYJ2 OMA:AQAVESQ PhylomeDB:Q8GYJ2
ProtClustDB:CLSN2680069 Genevestigator:Q8GYJ2 Uniprot:Q8GYJ2
Length = 244
Score = 125 (49.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 34/106 (32%), Positives = 53/106 (50%)
Query: 158 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNE---WKFRHIF 214
F K LT SD +P++ AE+ FP L + ++ + D E W+FR+ +
Sbjct: 38 FEKPLTPSDVGKLNRLVIPKQHAERYFP-LAAAAADAVEKGLLLCFEDEEGKPWRFRYSY 96
Query: 215 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKN--QLLLGIRR 258
+ ++LT GWS +V K L AGD VLF + + + +G RR
Sbjct: 97 WNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 127 (49.8 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 33/100 (33%), Positives = 49/100 (49%)
Query: 158 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQ 217
F K +T SD +P+ AEK FP + + L D++ W+FR+ +
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNS 247
Query: 218 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQLLLG 255
+ ++LT GWS FV K L AGD V F + + QL +G
Sbjct: 248 SQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287
>TAIR|locus:2170862 [details] [associations]
symbol:ATAUX2-11 "AT5G43700" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=ISS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;ISS;RCA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007020
"microtubule nucleation" evidence=RCA] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] [GO:0003677 "DNA binding"
evidence=ISS] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009536 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB026651
HOGENOM:HOG000238261 ProtClustDB:CLSN2681778 UniGene:At.47260
EMBL:X53435 EMBL:L15450 EMBL:BT005853 IPI:IPI00523552 PIR:S12243
RefSeq:NP_199183.1 IntAct:P33077 STRING:P33077
EnsemblPlants:AT5G43700.1 GeneID:834390 KEGG:ath:AT5G43700
GeneFarm:3150 TAIR:At5g43700 eggNOG:NOG253406 InParanoid:P33077
OMA:KVYKSYP PhylomeDB:P33077 Genevestigator:P33077
GermOnline:AT5G43700 Uniprot:P33077
Length = 186
Score = 119 (46.9 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 29/95 (30%), Positives = 52/95 (54%)
Query: 797 FVKVHKSGS-FGRSLDISKFSSYDELRSELARMFGLE-GQL---EDPQRSGWQLVFVDRE 851
+VKV G+ + R +D++ + Y EL L MF G+ E + S + + D++
Sbjct: 90 YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKD 149
Query: 852 NDVLLLGDDPWQEFVNNVGYIKILSPLEVQQMGKG 886
D +L+GD PW+ FV++ ++I+ EV+ +G G
Sbjct: 150 GDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLGCG 184
>TAIR|locus:2012438 [details] [associations]
symbol:RAV2 "related to ABI3/VP1 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC011914 EMBL:AC011665
HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484 KO:K09287
ProtClustDB:CLSN2682511 EMBL:AB013887 EMBL:AF360312 EMBL:AY056361
EMBL:AY085908 EMBL:AF003101 IPI:IPI00548727 PIR:T51330
RefSeq:NP_001185352.1 RefSeq:NP_564947.1 UniGene:At.25344
ProteinModelPortal:P82280 SMR:P82280 DIP:DIP-59694N STRING:P82280
PaxDb:P82280 PRIDE:P82280 EnsemblPlants:AT1G68840.1
EnsemblPlants:AT1G68840.2 GeneID:843216 KEGG:ath:AT1G68840
TAIR:At1g68840 InParanoid:P82280 OMA:MDSSCID PhylomeDB:P82280
Genevestigator:P82280 Uniprot:P82280
Length = 352
Score = 127 (49.8 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 32/88 (36%), Positives = 44/88 (50%)
Query: 158 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIA-RDLHDNEWKFRHIFRG 216
F K +T SD +P++ AEK FP S LI D++ W+FR+ +
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWN 247
Query: 217 QPKRHLLTTGWSVFVSAKRLVAGDSVLF 244
+ ++LT GWS FV K L AGD V F
Sbjct: 248 SSQSYVLTKGWSRFVKEKNLRAGDVVTF 275
>UNIPROTKB|Q5W670 [details] [associations]
symbol:IAA18 "Auxin-responsive protein IAA18" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC144740 EMBL:AK071192 RefSeq:NP_001056086.1 UniGene:Os.87732
PRIDE:Q5W670 EnsemblPlants:LOC_Os05g44810.1
EnsemblPlants:LOC_Os05g44810.2 EnsemblPlants:LOC_Os05g44810.3
GeneID:4339365 KEGG:dosa:Os05t0523300-01 KEGG:osa:4339365
Gramene:Q5W670 eggNOG:NOG327576 OMA:IRDEREW ProtClustDB:CLSN2691827
Uniprot:Q5W670
Length = 327
Score = 79 (32.9 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 843 WQLVFVDRENDVLLLGDDPWQEFVNNVGYIKILSPLEVQQMGKGLSPV 890
+ LV+ D + D +L GD PW+ FV+ V ++++ E+ G PV
Sbjct: 279 YTLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSELPHDMIGADPV 326
Score = 75 (31.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 768 DMTTSSCVDESGFLQSSENVDQVNP--PTRTFVKVHKSG-SFGRSLDISKFSSYDELRSE 824
++T S +S Q+ E D+ P R VK++ G GR +D+ + SY +L S
Sbjct: 180 NLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDLQIYDSYQKLSSA 239
Query: 825 LARMF-G-LEGQ 834
+ +F G LE Q
Sbjct: 240 VEELFRGFLEAQ 251
Score = 58 (25.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 22/84 (26%), Positives = 34/84 (40%)
Query: 692 LASLLPPFPGREYSSYHGSGDPQNNLLFGVSIDSSLMGQNGLPNLKN---ISSENESLSL 748
L L+P GRE+ G+ N D L + GLP ++ + E +
Sbjct: 14 LLHLIPD--GREWKVKEADGEGSRNTNLDADEDKELELKLGLPGVQQEERAADSREKIQQ 71
Query: 749 PYAASNFTNNVGTDFPLNSDMTTS 772
S+ ++G FP +S TTS
Sbjct: 72 QQRESSSEPSIGC-FPTHSKPTTS 94
>UNIPROTKB|Q5VRR0 [details] [associations]
symbol:IAA20 "Auxin-responsive protein IAA20" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AB023482 EMBL:AP002536 EMBL:AK102541 RefSeq:NP_001056915.2
UniGene:Os.15798 STRING:Q5VRR0 EnsemblPlants:LOC_Os06g07040.1
GeneID:4340245 KEGG:dosa:Os06t0166500-01 KEGG:osa:4340245
Gramene:Q5VRR0 eggNOG:NOG246219 OMA:KCARRRS ProtClustDB:CLSN2695987
Uniprot:Q5VRR0
Length = 183
Score = 116 (45.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 32/84 (38%), Positives = 44/84 (52%)
Query: 797 FVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDP----QRSGWQLVFVDRE 851
+VKV G + GR LD+S SY EL L MF Q ED +R + + + D E
Sbjct: 100 YVKVKMEGLAIGRKLDLSILGSYAELLDTLHLMFPSTNQ-EDGHDRRRRHPYAVTYEDGE 158
Query: 852 NDVLLLGDDPWQEFVNNVGYIKIL 875
D + +GD PW+ F +V +KIL
Sbjct: 159 GDWMQVGDVPWEAFAKSVKRLKIL 182
Score = 37 (18.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 8/34 (23%), Positives = 13/34 (38%)
Query: 582 STLPHLAXXXXXXXXTLQTVASQCQQSNFSDSLG 615
S P A L + C++ F ++LG
Sbjct: 15 SPSPATATAAGSELDLLNSAPGSCRKRGFEEALG 48
>TAIR|locus:2031185 [details] [associations]
symbol:TEM1 "TEMPRANILLO 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=NAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048573 HSSP:Q9ZWM9
HOGENOM:HOG000237484 KO:K09287 ProtClustDB:CLSN2682511
EMBL:AY091069 EMBL:AY122941 IPI:IPI00518546 PIR:A86386
RefSeq:NP_173927.1 UniGene:At.17318 ProteinModelPortal:Q9C6M5
SMR:Q9C6M5 DIP:DIP-59693N PaxDb:Q9C6M5 PRIDE:Q9C6M5
EnsemblPlants:AT1G25560.1 GeneID:839143 KEGG:ath:AT1G25560
TAIR:At1g25560 eggNOG:NOG250438 InParanoid:Q9C6M5 OMA:NDVAVEC
PhylomeDB:Q9C6M5 Genevestigator:Q9C6M5 Uniprot:Q9C6M5
Length = 361
Score = 124 (48.7 bits), Expect = 0.00020, P = 0.00020
Identities = 34/94 (36%), Positives = 47/94 (50%)
Query: 158 FCKTLTASDTSTHGGFSVPRRAAEKVFP-P-----LDYSQTPPAQELI-ARDLHDNEWKF 210
F KT+T SD +P++ AEK FP P + + +P LI D W+F
Sbjct: 195 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRF 254
Query: 211 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 244
R+ + + ++LT GWS FV K L AGD V F
Sbjct: 255 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCF 288
>UNIPROTKB|P49679 [details] [associations]
symbol:IAA4/5 "Auxin-induced protein IAA4" species:3888
"Pisum sativum" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:X68215
EMBL:X68216 PIR:S39075 IntAct:P49679 Uniprot:P49679
Length = 189
Score = 116 (45.9 bits), Expect = 0.00023, P = 0.00023
Identities = 29/96 (30%), Positives = 50/96 (52%)
Query: 797 FVKVHKSGS-FGRSLDISKFSSYDELRSELARMFGLE-GQLEDPQR---SGWQLVFVDRE 851
FVKV G+ + R +D+ + Y EL L MF L G+ + + S + + D++
Sbjct: 94 FVKVSMDGAPYLRKIDLRVYGGYSELLKALETMFKLTIGEYSEREGYKGSEYAPTYEDKD 153
Query: 852 NDVLLLGDDPWQEFVNNVGYIKILSPLEVQQMGKGL 887
D +L+GD PW FV + ++I+ E + +G G+
Sbjct: 154 GDWMLVGDVPWDMFVTSCKRLRIMKGTEAKGLGCGV 189
>TAIR|locus:2180557 [details] [associations]
symbol:IAA28 "AT5G25890" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0010102 "lateral
root morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 EMBL:AF149413
GO:GO:0010102 EMBL:AC005405 HOGENOM:HOG000238261 KO:K14484
EMBL:AF149816 EMBL:BT000427 EMBL:BT002175 IPI:IPI00545995
PIR:T52143 RefSeq:NP_568478.1 UniGene:At.11439 IntAct:Q9XFM0
EnsemblPlants:AT5G25890.1 GeneID:832658 KEGG:ath:AT5G25890
GeneFarm:3188 TAIR:At5g25890 eggNOG:NOG283222 InParanoid:Q9XFM0
OMA:WEMFVST PhylomeDB:Q9XFM0 ProtClustDB:CLSN2917715
Genevestigator:Q9XFM0 GermOnline:AT5G25890 Uniprot:Q9XFM0
Length = 175
Score = 114 (45.2 bits), Expect = 0.00025, P = 0.00025
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 797 FVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVL 855
+VK++ G GR +++S +++Y +L + ++F + D R + LV+ D E D +
Sbjct: 82 YVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSW-DLNRQ-YTLVYEDTEGDKV 139
Query: 856 LLGDDPWQEFVNNVGYIKIL 875
L+GD PW+ FV+ V + +L
Sbjct: 140 LVGDVPWEMFVSTVKRLHVL 159
>TAIR|locus:2090141 [details] [associations]
symbol:IAA19 "indole-3-acetic acid inducible 19"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009630 "gravitropism"
evidence=NAS] [GO:0009638 "phototropism" evidence=NAS] [GO:0009733
"response to auxin stimulus" evidence=RCA;NAS;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080086 "stamen filament development" evidence=IMP] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AB022218 EMBL:AC024081
HOGENOM:HOG000238261 KO:K14484 EMBL:AY088753 EMBL:U49075
IPI:IPI00522744 RefSeq:NP_188173.1 UniGene:At.10479 IntAct:O24409
STRING:O24409 EnsemblPlants:AT3G15540.1 GeneID:820793
KEGG:ath:AT3G15540 GeneFarm:3183 TAIR:At3g15540 eggNOG:NOG325225
InParanoid:O24409 OMA:NCEYVTI PhylomeDB:O24409
ProtClustDB:CLSN2679755 Genevestigator:O24409 GermOnline:AT3G15540
GO:GO:0080086 Uniprot:O24409
Length = 197
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 797 FVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEG---QLEDPQRSGWQLVFVDREN 852
+VKV G + R +D+ YD+L L ++FG G L+D + ++ D++
Sbjct: 98 YVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTIYEDKDG 157
Query: 853 DVLLLGDDPWQEFVNNVGYIKILSPLEVQQMGKGLSP 889
D +L GD PW F+ + ++I+ + G GL P
Sbjct: 158 DWMLAGDVPWGMFLESCKRLRIMKRSDAT--GFGLQP 192
>DICTYBASE|DDB_G0285837 [details] [associations]
symbol:DDB_G0285837 "BRWD group protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 dictyBase:DDB_G0285837 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
EMBL:AAFI02000080 HSSP:Q03330 RefSeq:XP_638029.1
ProteinModelPortal:Q54MP8 EnsemblProtists:DDB0220685 GeneID:8625294
KEGG:ddi:DDB_G0285837 InParanoid:Q54MP8 OMA:DEITDIY Uniprot:Q54MP8
Length = 2200
Score = 129 (50.5 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 294 FTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDL 353
+T+ Y+ P ++++ +K K++ RFRM + Y GTI ISD
Sbjct: 1350 YTVIYHVSDIP-DYLVLASKVRKSMLTDWTVPNKRFRMFYPASGW----YNGTIIEISDS 1404
Query: 354 DPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIE 388
DP+ +PNS W ++KV WD++ E + RV+ WEI+
Sbjct: 1405 DPL-FPNSPWENIKVLWDDT---EEEDRVNYWEID 1435
Score = 54 (24.1 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 731 NGLPNLKNISSENESLS---LPYAASNFTNNVGT-DFPLNSDMTTSSCVDESGFLQSSEN 786
N N N ++ N SL+ + Y+ +N NN ++ N++++ S +D + F ++ N
Sbjct: 1509 NNNNNNNNNNNNNNSLNGGLVDYSGNNNNNNNNNFNYNSNNNLSMSGILDYTNFNNNNNN 1568
Query: 787 VDQVN 791
N
Sbjct: 1569 FMNYN 1573
Score = 51 (23.0 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 66 PPVGSRVVYFPQGHSEQVAASTNKEVDAHIPN 97
P VG + YF QGH++ + +++++ N
Sbjct: 1217 PQVGDFIFYFYQGHTKYLEKFPPNGIESNLDN 1248
Score = 50 (22.7 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 708 HGSGDPQNNLLFGVSIDSSLMGQNGLPNLKNISSENE-SLSLPYAASNFTNNVGTDFPLN 766
+ + + NN L G +D S N N N +S N S+S +NF NN +F +N
Sbjct: 1514 NNNNNNNNNSLNGGLVDYSGNNNNNNNNNFNYNSNNNLSMSGILDYTNFNNN-NNNF-MN 1571
Query: 767 SDM 769
+M
Sbjct: 1572 YNM 1574
>UNIPROTKB|Q75GB1 [details] [associations]
symbol:IAA17 "Auxin-responsive protein IAA17" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=ISS] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC145396 EMBL:AC145477 EMBL:AK106192
EnsemblPlants:LOC_Os05g14180.1 KEGG:dosa:Os05t0230700-01
Gramene:Q75GB1 eggNOG:NOG266390 OMA:CKKLKIM Uniprot:Q75GB1
Length = 257
Score = 116 (45.9 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 25/85 (29%), Positives = 48/85 (56%)
Query: 797 FVKVHKSGS-FGRSLDISKFSSYDELRSELARMF-----GLEGQLEDPQRSGWQLVFVDR 850
+VKV G+ + R +D+ + +Y +L + L +MF G +G E + + L + D+
Sbjct: 153 YVKVSMDGAPYLRKVDLKTYKNYKDLSTALEKMFIGFTTGKDGLSESRKDGEYVLTYEDK 212
Query: 851 ENDVLLLGDDPWQEFVNNVGYIKIL 875
+ D +L+GD PW+ F N+ ++I+
Sbjct: 213 DGDWMLVGDVPWEMFANSCRRLRIM 237
Score = 42 (19.8 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 455 MQPRLDASIPGLQPDVYQAMAAAALQEMR 483
M P L+ GL P V A AAA +++
Sbjct: 1 MSPPLELDYIGLSPPVPAAADAAADNDLK 29
>TAIR|locus:2196573 [details] [associations]
symbol:IAA5 "indole-3-acetic acid inducible 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;RCA;TAS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC013453 HOGENOM:HOG000238261
EMBL:X53436 EMBL:AY150496 EMBL:U18407 IPI:IPI00531814 PIR:G86289
PIR:S12244 PIR:S58492 RefSeq:NP_173011.1 UniGene:At.28674
IntAct:P33078 STRING:P33078 EnsemblPlants:AT1G15580.1 GeneID:838128
KEGG:ath:AT1G15580 GeneFarm:3151 TAIR:At1g15580 eggNOG:NOG305053
OMA:ESECVPI PhylomeDB:P33078 ProtClustDB:CLSN2912676
Genevestigator:P33078 GermOnline:AT1G15580 Uniprot:P33078
Length = 163
Score = 108 (43.1 bits), Expect = 0.00086, P = 0.00086
Identities = 24/82 (29%), Positives = 45/82 (54%)
Query: 796 TFVKVHKSGS-FGRSLDISKFSSYDELRSELARMFGLEGQLEDP-QRSGWQLVFVDREND 853
++VKV G+ F R +D+ + Y +L S L +FG +D + S ++ D++ D
Sbjct: 75 SYVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYINFDDTLKESECVPIYEDKDGD 134
Query: 854 VLLLGDDPWQEFVNNVGYIKIL 875
+L GD PW+ F+ + ++I+
Sbjct: 135 WMLAGDVPWEMFLGSCKRLRIM 156
>UNIPROTKB|Q7Y1H8 [details] [associations]
symbol:IAA14 "Auxin-responsive protein IAA14" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AC093713
EMBL:AK059619 KEGG:dosa:Os03t0797800-01 Gramene:Q7Y1H8
eggNOG:NOG284674 Uniprot:Q7Y1H8
Length = 195
Score = 112 (44.5 bits), Expect = 0.00086, P = 0.00086
Identities = 23/86 (26%), Positives = 45/86 (52%)
Query: 797 FVKVHKSGS-FGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVL 855
+VKV G+ + R +D+ + Y ELR L +FG + + + + D++ D++
Sbjct: 110 YVKVSMDGAPYLRKVDLRMYGGYRELRDALDALFGCFSADASASAAHFAVAYEDKDGDLM 169
Query: 856 LLGDDPWQEFVNNVGYIKILSPLEVQ 881
L GD PW F+++ ++I+ E +
Sbjct: 170 LAGDVPWDMFISSCKKLRIMRGSEAR 195
>TAIR|locus:2018379 [details] [associations]
symbol:SHY2 "SHORT HYPOCOTYL 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
[GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351
EMBL:AC000104 HOGENOM:HOG000238261 KO:K14484
ProtClustDB:CLSN2681778 EMBL:U18406 EMBL:AF332393 EMBL:AY064007
IPI:IPI00519738 PIR:S58491 RefSeq:NP_171920.1 UniGene:At.20801
DIP:DIP-31741N IntAct:Q38822 STRING:Q38822 ProMEX:Q38822
DNASU:839570 EnsemblPlants:AT1G04240.1 GeneID:839570
KEGG:ath:AT1G04240 GeneFarm:3143 TAIR:At1g04240 eggNOG:NOG275456
InParanoid:Q38822 OMA:KNESEHE PhylomeDB:Q38822
Genevestigator:Q38822 GermOnline:AT1G04240 Uniprot:Q38822
Length = 189
Score = 111 (44.1 bits), Expect = 0.00098, P = 0.00098
Identities = 32/112 (28%), Positives = 56/112 (50%)
Query: 781 LQSSENVDQVNPPTRTFVKVHKSGS-FGRSLDISKFSSYDELRSELARMFGLE-GQ-LED 837
+QS +N + + +VKV G+ + R +D+S + Y EL L MF G+ E
Sbjct: 79 IQSKKNESE-HEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVGEYFER 137
Query: 838 PQRSGWQLV--FVDRENDVLLLGDDPWQEFVNNVGYIKILSPLEVQQMGKGL 887
G V + D++ D +L+GD PW+ F+ ++I+ E + +G G+
Sbjct: 138 DGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGLGCGV 189
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 928 823 0.00079 122 3 11 22 0.42 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 49
No. of states in DFA: 626 (67 KB)
Total size of DFA: 419 KB (2201 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 70.65u 0.18s 70.83t Elapsed: 00:00:03
Total cpu time: 70.66u 0.18s 70.84t Elapsed: 00:00:03
Start: Mon May 20 19:03:02 2013 End: Mon May 20 19:03:05 2013