Query 002392
Match_columns 928
No_of_seqs 358 out of 2626
Neff 8.9
Searched_HMMs 46136
Date Thu Mar 28 22:59:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002392.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002392hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0206 P-type ATPase [General 100.0 1E-157 2E-162 1394.8 59.3 852 34-928 11-863 (1151)
2 PLN03190 aminophospholipid tra 100.0 4E-148 9E-153 1365.2 81.6 853 34-928 67-940 (1178)
3 TIGR01652 ATPase-Plipid phosph 100.0 3E-139 7E-144 1304.4 83.4 829 55-927 1-836 (1057)
4 KOG0210 P-type ATPase [Inorgan 100.0 7E-134 2E-138 1085.2 50.9 781 36-927 62-849 (1051)
5 COG0474 MgtA Cation transport 100.0 3E-100 6E-105 932.3 48.6 641 49-927 51-707 (917)
6 KOG0202 Ca2+ transporting ATPa 100.0 1.5E-97 3E-102 827.3 38.5 691 48-927 29-746 (972)
7 TIGR01523 ATPase-IID_K-Na pota 100.0 5.4E-95 1.2E-99 893.2 53.3 707 48-927 32-814 (1053)
8 TIGR01106 ATPase-IIC_X-K sodiu 100.0 9.6E-94 2.1E-98 886.0 52.4 677 48-927 42-752 (997)
9 KOG0204 Calcium transporting A 100.0 1.9E-94 4.2E-99 800.8 39.8 654 48-927 125-807 (1034)
10 TIGR01517 ATPase-IIB_Ca plasma 100.0 8.3E-93 1.8E-97 875.9 49.5 643 48-927 66-737 (941)
11 TIGR01657 P-ATPase-V P-type AT 100.0 8.6E-92 1.9E-96 874.4 58.4 701 49-927 146-867 (1054)
12 TIGR01116 ATPase-IIA1_Ca sarco 100.0 1E-90 2.2E-95 853.8 54.6 670 75-927 1-698 (917)
13 PRK10517 magnesium-transportin 100.0 9.9E-89 2.1E-93 827.6 50.1 609 48-927 73-705 (902)
14 TIGR01522 ATPase-IIA2_Ca golgi 100.0 1.9E-87 4E-92 823.4 55.9 635 48-927 30-686 (884)
15 PRK15122 magnesium-transportin 100.0 1.1E-87 2.4E-92 820.1 51.5 624 48-927 51-705 (903)
16 TIGR01524 ATPase-IIIB_Mg magne 100.0 2.3E-87 4.9E-92 817.0 50.8 609 48-927 39-670 (867)
17 TIGR01647 ATPase-IIIA_H plasma 100.0 8.4E-87 1.8E-91 802.3 52.7 585 48-927 7-602 (755)
18 KOG0208 Cation transport ATPas 100.0 5.1E-84 1.1E-88 727.7 45.9 724 49-927 167-922 (1140)
19 KOG0203 Na+/K+ ATPase, alpha s 100.0 1.7E-78 3.6E-83 673.0 23.1 677 49-927 65-774 (1019)
20 PRK01122 potassium-transportin 100.0 1.6E-74 3.5E-79 671.6 49.2 516 77-918 29-566 (679)
21 PRK14010 potassium-transportin 100.0 1E-74 2.3E-79 672.6 47.4 523 77-928 28-572 (673)
22 TIGR01497 kdpB K+-transporting 100.0 2.2E-71 4.8E-76 643.7 48.1 528 77-928 28-577 (675)
23 KOG0209 P-type ATPase [Inorgan 100.0 3.6E-70 7.7E-75 601.8 29.3 641 52-886 173-833 (1160)
24 TIGR01494 ATPase_P-type ATPase 100.0 4.6E-66 9.9E-71 601.9 43.1 461 107-928 4-470 (499)
25 COG2217 ZntA Cation transport 100.0 4.6E-66 9.9E-71 600.0 40.6 480 107-928 177-668 (713)
26 KOG0205 Plasma membrane H+-tra 100.0 3.3E-65 7.1E-70 550.1 22.6 595 48-928 42-653 (942)
27 PRK11033 zntA zinc/cadmium/mer 100.0 1.6E-62 3.6E-67 589.5 44.4 478 108-928 210-697 (741)
28 KOG0207 Cation transport ATPas 100.0 4.4E-62 9.6E-67 551.6 31.7 502 103-928 340-854 (951)
29 TIGR01525 ATPase-IB_hvy heavy 100.0 9.1E-61 2E-65 562.1 41.3 491 102-928 16-516 (556)
30 TIGR01511 ATPase-IB1_Cu copper 100.0 1.4E-59 3E-64 549.9 39.6 475 103-928 53-535 (562)
31 TIGR01512 ATPase-IB2_Cd heavy 100.0 3.1E-59 6.7E-64 545.4 41.6 481 87-927 5-494 (536)
32 PRK10671 copA copper exporting 100.0 3.8E-57 8.2E-62 554.9 44.9 472 119-928 298-781 (834)
33 COG2216 KdpB High-affinity K+ 100.0 5.8E-50 1.3E-54 423.5 28.9 445 137-902 103-551 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 6.8E-31 1.5E-35 275.9 19.7 222 110-416 2-230 (230)
35 PF00702 Hydrolase: haloacid d 99.8 4.8E-21 1E-25 199.2 13.1 97 698-879 115-215 (215)
36 PF13246 Hydrolase_like2: Puta 99.5 3.4E-14 7.4E-19 124.2 6.0 90 523-630 1-90 (91)
37 COG4087 Soluble P-type ATPase 99.5 1.4E-13 3E-18 121.5 9.1 126 699-910 19-146 (152)
38 PRK10513 sugar phosphate phosp 99.3 3.1E-11 6.7E-16 130.1 12.2 61 841-902 188-254 (270)
39 COG0561 Cof Predicted hydrolas 99.2 5.2E-11 1.1E-15 127.9 12.4 193 703-902 12-247 (264)
40 PRK15126 thiamin pyrimidine py 99.1 2.3E-10 4.9E-15 123.4 12.4 61 840-901 179-247 (272)
41 PRK10976 putative hydrolase; P 99.1 4.6E-10 9.9E-15 120.7 12.7 62 840-902 181-250 (266)
42 PLN02887 hydrolase family prot 99.1 2.4E-10 5.2E-15 132.8 8.9 61 841-902 499-565 (580)
43 TIGR01482 SPP-subfamily Sucros 99.1 9.8E-10 2.1E-14 115.0 12.6 187 710-902 15-207 (225)
44 PRK01158 phosphoglycolate phos 99.1 1E-09 2.2E-14 115.3 12.2 184 708-902 17-215 (230)
45 PF08282 Hydrolase_3: haloacid 99.0 2.6E-09 5.7E-14 113.7 14.1 188 709-902 14-244 (254)
46 TIGR01487 SPP-like sucrose-pho 99.0 3.1E-09 6.6E-14 110.3 11.9 178 710-902 18-205 (215)
47 PRK10530 pyridoxal phosphate ( 99.0 5.3E-09 1.1E-13 112.9 13.7 56 846-902 198-257 (272)
48 PRK03669 mannosyl-3-phosphogly 98.9 8.1E-09 1.8E-13 111.1 13.8 39 711-749 25-63 (271)
49 COG0560 SerB Phosphoserine pho 98.9 3.9E-08 8.5E-13 100.6 14.9 121 709-901 76-200 (212)
50 TIGR01486 HAD-SF-IIB-MPGP mann 98.9 1.9E-08 4.1E-13 107.4 13.2 40 711-750 17-56 (256)
51 PRK11133 serB phosphoserine ph 98.8 2.6E-08 5.5E-13 108.5 12.4 132 710-914 181-316 (322)
52 TIGR00099 Cof-subfamily Cof su 98.8 1.5E-08 3.3E-13 108.2 9.2 61 841-902 180-246 (256)
53 TIGR02137 HSK-PSP phosphoserin 98.8 4.5E-08 9.8E-13 99.7 11.5 113 710-897 68-180 (203)
54 PRK00192 mannosyl-3-phosphogly 98.6 3.1E-07 6.7E-12 99.0 14.0 42 709-750 20-61 (273)
55 TIGR01485 SPP_plant-cyano sucr 98.6 3.5E-07 7.5E-12 97.2 12.1 183 708-894 19-218 (249)
56 TIGR02471 sucr_syn_bact_C sucr 98.6 3.9E-07 8.4E-12 96.0 11.3 180 716-901 21-220 (236)
57 TIGR02726 phenyl_P_delta pheny 98.5 2.9E-07 6.4E-12 90.3 8.8 95 717-901 41-139 (169)
58 TIGR02461 osmo_MPG_phos mannos 98.5 3.7E-07 7.9E-12 95.0 9.9 43 708-750 13-55 (225)
59 TIGR00338 serB phosphoserine p 98.5 5.2E-07 1.1E-11 93.9 11.0 122 710-904 85-211 (219)
60 TIGR02463 MPGP_rel mannosyl-3- 98.5 1.2E-06 2.6E-11 91.3 13.0 48 713-762 19-66 (221)
61 TIGR01670 YrbI-phosphatas 3-de 98.5 7.5E-07 1.6E-11 86.8 10.3 95 718-902 36-134 (154)
62 PRK10187 trehalose-6-phosphate 98.4 2E-06 4.3E-11 91.9 13.4 184 710-905 36-235 (266)
63 PRK09484 3-deoxy-D-manno-octul 98.4 8.7E-07 1.9E-11 89.0 9.1 112 717-918 55-177 (183)
64 PLN02382 probable sucrose-phos 98.4 3.9E-06 8.4E-11 95.0 14.0 181 711-895 29-230 (413)
65 PRK14502 bifunctional mannosyl 98.4 4.8E-06 1.1E-10 96.7 14.4 39 711-749 434-472 (694)
66 PTZ00174 phosphomannomutase; P 98.3 1.3E-06 2.7E-11 92.6 8.6 54 842-896 181-241 (247)
67 TIGR01484 HAD-SF-IIB HAD-super 98.3 5E-06 1.1E-10 85.5 11.4 48 710-757 17-66 (204)
68 PRK13582 thrH phosphoserine ph 98.3 6E-06 1.3E-10 85.0 11.3 125 710-909 68-194 (205)
69 PRK12702 mannosyl-3-phosphogly 98.2 1.2E-05 2.6E-10 84.3 12.7 42 709-750 17-58 (302)
70 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.2 9.1E-06 2E-10 83.3 11.6 117 710-897 80-200 (201)
71 KOG1615 Phosphoserine phosphat 98.2 1.4E-06 3.1E-11 83.4 4.9 129 710-906 88-221 (227)
72 PF12710 HAD: haloacid dehalog 98.1 1.7E-05 3.7E-10 80.5 11.1 39 713-751 92-130 (192)
73 COG1778 Low specificity phosph 98.1 5.9E-06 1.3E-10 76.7 5.8 108 717-915 42-159 (170)
74 PLN02954 phosphoserine phospha 98.0 4.1E-05 9E-10 79.9 11.7 41 710-750 84-124 (224)
75 TIGR03333 salvage_mtnX 2-hydro 97.9 7.4E-05 1.6E-09 77.3 12.0 140 709-913 69-211 (214)
76 PRK14501 putative bifunctional 97.9 0.00018 3.9E-09 88.3 16.4 186 711-909 515-719 (726)
77 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.8 5.7E-05 1.2E-09 77.4 8.8 110 708-886 85-198 (202)
78 cd01427 HAD_like Haloacid deha 97.8 6.8E-05 1.5E-09 71.0 7.9 44 707-750 21-64 (139)
79 TIGR01488 HAD-SF-IB Haloacid D 97.7 0.00012 2.6E-09 73.2 9.4 40 711-750 74-113 (177)
80 PRK09552 mtnX 2-hydroxy-3-keto 97.7 0.00023 5E-09 73.9 11.7 135 710-909 74-211 (219)
81 PLN02580 trehalose-phosphatase 97.7 0.00099 2.1E-08 73.6 15.8 232 663-910 91-373 (384)
82 TIGR01489 DKMTPPase-SF 2,3-dik 97.7 0.00024 5.1E-09 71.8 10.1 42 709-750 71-112 (188)
83 PRK13222 phosphoglycolate phos 97.6 0.00024 5.1E-09 74.3 10.2 123 709-909 92-220 (226)
84 COG0546 Gph Predicted phosphat 97.6 0.00032 7E-09 72.9 10.2 126 708-909 87-216 (220)
85 TIGR01454 AHBA_synth_RP 3-amin 97.6 0.00026 5.7E-09 72.7 9.4 41 710-750 75-115 (205)
86 PF05116 S6PP: Sucrose-6F-phos 97.5 0.00038 8.1E-09 73.6 9.3 167 722-890 31-212 (247)
87 PLN02423 phosphomannomutase 97.5 0.00046 9.9E-09 72.8 9.5 49 840-889 180-235 (245)
88 PRK13223 phosphoglycolate phos 97.4 0.00061 1.3E-08 73.2 9.9 41 709-749 100-140 (272)
89 TIGR00685 T6PP trehalose-phosp 97.4 0.0018 3.9E-08 68.4 13.4 67 840-909 160-238 (244)
90 TIGR01449 PGP_bact 2-phosphogl 97.4 0.0007 1.5E-08 70.0 9.3 41 710-750 85-125 (213)
91 PLN02205 alpha,alpha-trehalose 97.3 0.0069 1.5E-07 74.7 18.5 201 698-909 604-840 (854)
92 PLN03017 trehalose-phosphatase 97.3 0.0057 1.2E-07 67.1 15.3 230 663-909 83-354 (366)
93 PRK08238 hypothetical protein; 97.2 0.0014 3.1E-08 75.5 10.3 40 710-749 72-111 (479)
94 PRK13226 phosphoglycolate phos 97.2 0.0013 2.8E-08 68.8 9.3 41 710-750 95-135 (229)
95 PRK13288 pyrophosphatase PpaX; 97.2 0.0012 2.6E-08 68.4 8.8 41 710-750 82-122 (214)
96 PRK13225 phosphoglycolate phos 97.2 0.0022 4.8E-08 68.7 11.1 41 710-750 142-182 (273)
97 PLN03243 haloacid dehalogenase 97.2 0.0018 3.9E-08 68.9 9.9 121 710-909 109-233 (260)
98 TIGR01545 YfhB_g-proteo haloac 97.0 0.0034 7.3E-08 64.5 10.0 108 710-887 94-203 (210)
99 PRK10826 2-deoxyglucose-6-phos 97.0 0.002 4.3E-08 67.1 8.4 42 709-750 91-132 (222)
100 PRK11590 hypothetical protein; 97.0 0.0032 6.9E-08 64.9 9.7 109 710-888 95-205 (211)
101 smart00831 Cation_ATPase_N Cat 96.8 0.00084 1.8E-08 54.5 2.9 46 48-96 16-61 (64)
102 TIGR01544 HAD-SF-IE haloacid d 96.8 0.0049 1.1E-07 65.1 9.2 46 710-755 121-166 (277)
103 PRK11587 putative phosphatase; 96.8 0.0066 1.4E-07 63.0 10.0 40 710-749 83-122 (218)
104 TIGR03351 PhnX-like phosphonat 96.8 0.0043 9.4E-08 64.4 8.6 42 709-750 86-127 (220)
105 PLN02575 haloacid dehalogenase 96.8 0.0068 1.5E-07 67.2 10.3 41 710-750 216-256 (381)
106 smart00775 LNS2 LNS2 domain. T 96.8 0.0072 1.6E-07 58.9 9.4 34 708-741 25-58 (157)
107 PLN02151 trehalose-phosphatase 96.7 0.037 8E-07 60.6 15.1 234 664-910 71-341 (354)
108 TIGR01422 phosphonatase phosph 96.7 0.0074 1.6E-07 64.2 9.6 41 710-750 99-139 (253)
109 PF00690 Cation_ATPase_N: Cati 96.6 0.00079 1.7E-08 55.6 1.2 44 48-94 26-69 (69)
110 PRK06769 hypothetical protein; 96.5 0.013 2.8E-07 58.3 9.3 41 697-737 11-55 (173)
111 COG4030 Uncharacterized protei 96.5 0.012 2.5E-07 58.3 8.5 55 846-902 190-251 (315)
112 PLN02770 haloacid dehalogenase 96.5 0.014 3E-07 61.9 9.9 41 710-750 108-148 (248)
113 TIGR01672 AphA HAD superfamily 96.4 0.0078 1.7E-07 62.6 7.5 40 711-750 115-158 (237)
114 PLN02779 haloacid dehalogenase 96.4 0.014 2.9E-07 63.3 9.6 38 710-747 144-181 (286)
115 PRK11009 aphA acid phosphatase 96.4 0.017 3.7E-07 60.1 9.4 40 710-749 114-157 (237)
116 PRK13478 phosphonoacetaldehyde 96.4 0.015 3.3E-07 62.3 9.6 41 710-750 101-141 (267)
117 TIGR01548 HAD-SF-IA-hyp1 haloa 96.3 0.017 3.7E-07 58.8 9.0 43 708-750 104-146 (197)
118 PRK06698 bifunctional 5'-methy 96.3 0.021 4.5E-07 66.4 10.8 41 710-750 330-370 (459)
119 TIGR02253 CTE7 HAD superfamily 96.3 0.019 4.2E-07 59.5 9.6 41 710-750 94-134 (221)
120 PHA02530 pseT polynucleotide k 95.9 0.016 3.4E-07 63.4 7.1 44 707-750 184-227 (300)
121 TIGR01662 HAD-SF-IIIA HAD-supe 95.9 0.036 7.7E-07 52.3 8.5 41 709-749 24-72 (132)
122 PLN02940 riboflavin kinase 95.9 0.028 6.1E-07 63.4 9.0 40 710-749 93-133 (382)
123 PRK08942 D,D-heptose 1,7-bisph 95.8 0.052 1.1E-06 54.4 9.9 50 860-909 121-175 (181)
124 PRK14988 GMP/IMP nucleotidase; 95.6 0.06 1.3E-06 56.0 9.5 41 710-750 93-133 (224)
125 TIGR01428 HAD_type_II 2-haloal 95.5 0.05 1.1E-06 55.4 8.5 41 710-750 92-132 (198)
126 PRK09449 dUMP phosphatase; Pro 95.5 0.067 1.5E-06 55.6 9.4 40 710-750 95-134 (224)
127 TIGR01458 HAD-SF-IIA-hyp3 HAD- 95.2 0.19 4.1E-06 53.5 12.0 48 703-750 10-64 (257)
128 PF13419 HAD_2: Haloacid dehal 95.2 0.035 7.6E-07 54.8 6.0 44 707-750 74-117 (176)
129 TIGR01990 bPGM beta-phosphoglu 95.2 0.044 9.5E-07 55.0 6.7 38 710-749 87-124 (185)
130 TIGR02254 YjjG/YfnB HAD superf 95.2 0.077 1.7E-06 55.1 8.7 40 710-750 97-136 (224)
131 TIGR02009 PGMB-YQAB-SF beta-ph 95.1 0.048 1E-06 54.7 6.6 40 709-750 87-126 (185)
132 TIGR01685 MDP-1 magnesium-depe 95.0 0.14 3E-06 50.7 9.4 53 698-750 33-86 (174)
133 PLN02811 hydrolase 95.0 0.081 1.7E-06 54.9 8.1 48 860-907 158-207 (220)
134 TIGR01509 HAD-SF-IA-v3 haloaci 95.0 0.093 2E-06 52.4 8.4 40 710-750 85-124 (183)
135 TIGR01533 lipo_e_P4 5'-nucleot 94.6 0.2 4.3E-06 53.1 9.8 43 708-750 116-161 (266)
136 TIGR00213 GmhB_yaeD D,D-heptos 94.5 0.2 4.4E-06 49.8 9.4 48 860-907 124-175 (176)
137 COG3769 Predicted hydrolase (H 94.4 0.68 1.5E-05 46.2 12.2 37 714-750 27-63 (274)
138 TIGR01549 HAD-SF-IA-v1 haloaci 94.3 0.15 3.2E-06 49.5 7.6 40 708-747 62-101 (154)
139 PF02358 Trehalose_PPase: Treh 94.2 0.23 5.1E-06 52.0 9.5 67 836-902 154-233 (235)
140 TIGR01675 plant-AP plant acid 94.2 0.24 5.1E-06 51.1 9.0 30 710-739 120-149 (229)
141 TIGR01668 YqeG_hyp_ppase HAD s 94.0 0.24 5.2E-06 49.0 8.5 40 710-749 43-83 (170)
142 TIGR01656 Histidinol-ppas hist 93.9 0.26 5.6E-06 47.5 8.3 27 710-736 27-53 (147)
143 smart00577 CPDc catalytic doma 93.6 0.098 2.1E-06 50.5 4.9 43 707-750 42-84 (148)
144 TIGR02252 DREG-2 REG-2-like, H 93.5 0.22 4.7E-06 50.9 7.7 39 710-749 105-143 (203)
145 COG4359 Uncharacterized conser 93.5 0.27 5.8E-06 47.5 7.3 39 846-884 146-184 (220)
146 TIGR01681 HAD-SF-IIIC HAD-supe 93.0 0.32 7E-06 45.6 7.2 39 710-748 29-68 (128)
147 TIGR01261 hisB_Nterm histidino 92.4 0.37 8E-06 47.2 7.0 26 710-735 29-54 (161)
148 PRK10563 6-phosphogluconate ph 91.9 0.22 4.8E-06 51.6 5.1 39 709-750 87-125 (221)
149 PLN02919 haloacid dehalogenase 91.5 0.96 2.1E-05 58.0 11.0 41 710-750 161-201 (1057)
150 PRK05446 imidazole glycerol-ph 91.4 0.75 1.6E-05 50.9 8.7 27 709-735 29-55 (354)
151 TIGR01686 FkbH FkbH-like domai 90.8 0.68 1.5E-05 51.0 7.8 37 710-746 31-67 (320)
152 TIGR01664 DNA-3'-Pase DNA 3'-p 90.6 1.1 2.3E-05 44.2 8.1 27 711-737 43-69 (166)
153 TIGR02247 HAD-1A3-hyp Epoxide 90.4 0.49 1.1E-05 48.6 5.8 29 710-738 94-122 (211)
154 TIGR01691 enolase-ppase 2,3-di 89.9 1.8 3.8E-05 44.8 9.4 41 707-747 92-132 (220)
155 KOG4383 Uncharacterized conser 89.8 1 2.2E-05 51.8 7.9 58 694-751 810-867 (1354)
156 COG1877 OtsB Trehalose-6-phosp 88.7 7.9 0.00017 41.0 13.2 197 706-910 36-252 (266)
157 PF06888 Put_Phosphatase: Puta 88.7 1.1 2.3E-05 46.6 6.7 42 710-751 71-114 (234)
158 PF03767 Acid_phosphat_B: HAD 88.2 1.3 2.7E-05 46.2 7.0 30 709-738 114-143 (229)
159 PHA02597 30.2 hypothetical pro 87.4 3 6.5E-05 42.2 9.2 37 848-884 132-173 (197)
160 PLN02645 phosphoglycolate phos 87.4 2.1 4.4E-05 47.0 8.4 47 703-749 37-86 (311)
161 TIGR01459 HAD-SF-IIA-hyp4 HAD- 87.0 2.1 4.6E-05 45.0 7.9 48 703-750 17-66 (242)
162 PF08235 LNS2: LNS2 (Lipin/Ned 86.6 2.8 6E-05 40.4 7.6 35 709-743 26-60 (157)
163 COG2179 Predicted hydrolase of 86.3 2.5 5.5E-05 40.6 7.0 40 711-750 47-86 (175)
164 KOG4383 Uncharacterized conser 84.9 1.5 3.2E-05 50.6 5.5 76 103-179 87-196 (1354)
165 PF13344 Hydrolase_6: Haloacid 84.7 0.92 2E-05 40.5 3.2 48 703-750 7-57 (101)
166 KOG3120 Predicted haloacid deh 84.0 6.3 0.00014 39.7 8.8 40 710-749 84-124 (256)
167 PRK09456 ?-D-glucose-1-phospha 83.9 2.2 4.9E-05 43.3 6.2 31 710-740 84-114 (199)
168 COG0241 HisB Histidinol phosph 83.4 6.7 0.00015 38.8 8.9 34 848-881 108-144 (181)
169 PLN02177 glycerol-3-phosphate 82.6 7.3 0.00016 45.4 10.2 66 846-919 175-240 (497)
170 TIGR01457 HAD-SF-IIA-hyp2 HAD- 82.1 2.7 5.8E-05 44.5 6.1 50 703-752 10-62 (249)
171 PRK10444 UMP phosphatase; Prov 81.7 1.7 3.8E-05 45.8 4.4 45 703-747 10-54 (248)
172 TIGR01684 viral_ppase viral ph 80.9 3.3 7.1E-05 44.1 6.0 41 711-751 146-187 (301)
173 TIGR01680 Veg_Stor_Prot vegeta 80.8 8 0.00017 40.8 8.8 30 709-738 144-173 (275)
174 PF13242 Hydrolase_like: HAD-h 79.8 4.1 8.8E-05 33.9 5.2 47 859-905 21-74 (75)
175 TIGR01993 Pyr-5-nucltdase pyri 79.8 4.8 0.0001 40.2 6.7 38 710-750 84-121 (184)
176 PRK10725 fructose-1-P/6-phosph 79.2 4.6 9.9E-05 40.4 6.4 35 715-750 92-126 (188)
177 TIGR01689 EcbF-BcbF capsule bi 78.8 1.8 3.8E-05 40.3 2.9 33 709-741 23-55 (126)
178 COG0637 Predicted phosphatase/ 77.7 7.4 0.00016 40.2 7.6 43 709-751 85-127 (221)
179 PLN03063 alpha,alpha-trehalose 76.3 1.1E+02 0.0023 38.4 18.2 37 711-747 533-570 (797)
180 PF09419 PGP_phosphatase: Mito 74.8 11 0.00024 36.9 7.3 42 708-749 57-107 (168)
181 TIGR01517 ATPase-IIB_Ca plasma 74.7 6.4 0.00014 50.2 7.3 22 146-167 186-207 (941)
182 PHA03398 viral phosphatase sup 74.5 6.6 0.00014 41.9 6.1 41 711-751 148-189 (303)
183 TIGR01657 P-ATPase-V P-type AT 74.2 78 0.0017 41.1 16.9 82 106-197 192-273 (1054)
184 KOG0210 P-type ATPase [Inorgan 73.3 21 0.00045 42.1 9.9 183 58-246 85-290 (1051)
185 PRK10748 flavin mononucleotide 70.1 14 0.00029 38.8 7.4 50 860-909 181-237 (238)
186 TIGR02468 sucrsPsyn_pln sucros 68.1 41 0.00088 42.7 11.8 64 823-886 925-1002(1050)
187 COG1011 Predicted hydrolase (H 67.3 33 0.00072 35.3 9.7 40 710-750 99-138 (229)
188 PLN03064 alpha,alpha-trehalose 63.4 1.9E+02 0.0042 36.6 16.3 38 711-748 623-661 (934)
189 TIGR01663 PNK-3'Pase polynucle 60.7 34 0.00073 40.2 8.8 27 711-737 198-224 (526)
190 TIGR01452 PGP_euk phosphoglyco 60.7 17 0.00036 39.2 6.0 50 703-752 11-63 (279)
191 KOG3040 Predicted sugar phosph 58.9 19 0.0004 36.1 5.2 49 699-747 12-60 (262)
192 TIGR01647 ATPase-IIIA_H plasma 58.8 1.3E+02 0.0027 37.6 13.9 22 146-167 112-133 (755)
193 TIGR02251 HIF-SF_euk Dullard-l 56.4 9.2 0.0002 37.4 2.8 43 706-749 38-80 (162)
194 COG0474 MgtA Cation transport 55.8 62 0.0013 41.2 10.6 124 146-317 160-287 (917)
195 PF12791 RsgI_N: Anti-sigma fa 53.5 18 0.0004 28.1 3.6 38 136-173 4-42 (56)
196 COG3700 AphA Acid phosphatase 53.3 37 0.00081 33.0 6.1 39 711-749 115-157 (237)
197 cd02071 MM_CoA_mut_B12_BD meth 52.8 42 0.0009 31.0 6.4 80 645-749 22-103 (122)
198 COG0647 NagD Predicted sugar p 49.0 22 0.00049 37.7 4.4 47 701-747 15-61 (269)
199 TIGR01493 HAD-SF-IA-v2 Haloaci 47.3 26 0.00056 34.4 4.5 33 710-749 90-122 (175)
200 cd02067 B12-binding B12 bindin 46.5 71 0.0015 29.1 6.9 81 644-749 21-103 (119)
201 TIGR01116 ATPase-IIA1_Ca sarco 45.6 3.1E+02 0.0068 35.1 14.7 23 146-168 93-115 (917)
202 TIGR01106 ATPase-IIC_X-K sodiu 43.8 3.1E+02 0.0068 35.4 14.4 125 146-319 161-286 (997)
203 TIGR01460 HAD-SF-IIA Haloacid 41.6 43 0.00094 34.9 5.3 47 703-749 7-57 (236)
204 PTZ00445 p36-lilke protein; Pr 41.1 43 0.00094 34.0 4.8 29 711-739 76-104 (219)
205 PF12689 Acid_PPase: Acid Phos 40.3 46 0.001 32.7 4.8 41 710-750 45-86 (169)
206 TIGR01523 ATPase-IID_K-Na pota 37.5 8.3E+02 0.018 31.8 16.7 22 146-167 138-159 (1053)
207 COG1188 Ribosome-associated he 37.4 48 0.001 29.2 3.9 36 132-171 28-63 (100)
208 TIGR01501 MthylAspMutase methy 36.9 1.1E+02 0.0024 28.8 6.6 80 645-749 24-111 (134)
209 PRK10444 UMP phosphatase; Prov 35.9 2.5E+02 0.0054 29.6 9.9 48 859-906 191-245 (248)
210 PRK10517 magnesium-transportin 34.0 1.2E+02 0.0027 38.5 8.4 24 634-657 550-573 (902)
211 PF13380 CoA_binding_2: CoA bi 33.9 60 0.0013 29.7 4.3 38 712-749 65-103 (116)
212 COG2503 Predicted secreted aci 32.7 2.9E+02 0.0063 28.8 9.0 39 711-749 123-165 (274)
213 PRK02261 methylaspartate mutas 32.7 1.4E+02 0.003 28.2 6.6 80 645-749 26-113 (137)
214 PF12148 DUF3590: Protein of u 32.3 31 0.00068 29.4 1.9 24 149-172 58-81 (85)
215 smart00831 Cation_ATPase_N Cat 31.9 1.2E+02 0.0025 24.1 5.2 39 281-319 23-61 (64)
216 TIGR01452 PGP_euk phosphoglyco 31.8 1.1E+02 0.0024 32.8 6.6 24 859-882 219-243 (279)
217 PF12710 HAD: haloacid dehalog 31.0 24 0.00051 35.2 1.2 29 848-876 158-192 (192)
218 TIGR02250 FCP1_euk FCP1-like p 29.9 79 0.0017 30.6 4.6 44 706-750 54-97 (156)
219 TIGR02244 HAD-IG-Ncltidse HAD 26.9 84 0.0018 34.8 4.6 37 712-748 186-223 (343)
220 PRK08508 biotin synthase; Prov 26.9 5.4E+02 0.012 27.5 10.8 44 715-758 101-160 (279)
221 TIGR00640 acid_CoA_mut_C methy 26.9 1.5E+02 0.0033 27.8 5.7 81 645-750 25-107 (132)
222 TIGR01522 ATPase-IIA2_Ca golgi 26.8 7E+02 0.015 31.8 13.4 23 146-168 137-159 (884)
223 TIGR00739 yajC preprotein tran 26.3 1.3E+02 0.0028 25.8 4.6 12 156-167 37-48 (84)
224 PRK11507 ribosome-associated p 26.0 63 0.0014 26.5 2.5 22 146-167 42-63 (70)
225 TIGR01652 ATPase-Plipid phosph 25.8 1.1E+03 0.024 30.8 15.2 170 74-246 23-215 (1057)
226 PF11694 DUF3290: Protein of u 25.6 2.7E+02 0.006 26.7 7.2 63 104-166 46-115 (149)
227 PRK05585 yajC preprotein trans 25.4 1.5E+02 0.0032 26.7 5.1 13 156-168 52-64 (106)
228 PF13275 S4_2: S4 domain; PDB: 25.4 35 0.00075 27.6 0.9 20 146-165 38-57 (65)
229 PF15584 Imm44: Immunity prote 25.0 33 0.00072 29.5 0.8 21 159-179 13-33 (94)
230 COG0279 GmhA Phosphoheptose is 24.5 65 0.0014 31.3 2.7 32 713-744 123-154 (176)
231 TIGR01662 HAD-SF-IIIA HAD-supe 23.8 5.6E+02 0.012 23.4 9.8 95 638-750 29-126 (132)
232 TIGR01459 HAD-SF-IIA-hyp4 HAD- 23.7 73 0.0016 33.3 3.4 23 860-882 214-237 (242)
233 PF06941 NT5C: 5' nucleotidase 23.6 67 0.0014 32.2 2.9 29 710-738 73-101 (191)
234 TIGR02370 pyl_corrinoid methyl 23.3 1.3E+02 0.0029 30.3 5.0 78 645-749 107-187 (197)
235 TIGR01525 ATPase-IB_hvy heavy 23.3 4.8E+02 0.01 31.1 10.6 83 634-748 384-467 (556)
236 cd06919 Asp_decarbox Aspartate 22.8 1E+02 0.0022 27.7 3.4 84 537-669 17-100 (111)
237 PF03120 DNA_ligase_OB: NAD-de 22.3 43 0.00094 28.5 1.0 21 153-173 46-67 (82)
238 PF13253 DUF4044: Protein of u 22.2 2.9E+02 0.0062 19.4 4.9 18 289-306 3-20 (35)
239 PF02261 Asp_decarbox: Asparta 22.1 37 0.0008 30.7 0.6 84 538-670 19-102 (116)
240 cd02070 corrinoid_protein_B12- 21.9 1.8E+02 0.0039 29.4 5.7 78 645-749 105-185 (201)
241 TIGR00223 panD L-aspartate-alp 21.9 1E+02 0.0023 28.3 3.4 84 537-669 18-101 (126)
242 PLN02645 phosphoglycolate phos 21.8 1.4E+02 0.003 32.7 5.2 51 859-909 247-306 (311)
243 PRK09545 znuA high-affinity zi 21.7 4.8E+02 0.01 28.5 9.3 53 697-749 220-276 (311)
244 cd01137 PsaA Metal binding pro 21.5 4.1E+02 0.0088 28.6 8.7 54 697-750 194-251 (287)
245 PRK05449 aspartate alpha-decar 21.4 1.1E+02 0.0024 28.2 3.4 84 537-669 18-101 (126)
246 cd05017 SIS_PGI_PMI_1 The memb 21.3 1.3E+02 0.0028 27.4 4.1 36 711-748 55-90 (119)
247 KOG1419 Voltage-gated K+ chann 21.1 2.2E+02 0.0048 33.1 6.4 28 161-196 173-200 (654)
248 PF09926 DUF2158: Uncharacteri 21.0 59 0.0013 25.1 1.4 13 158-170 2-14 (53)
249 cd05013 SIS_RpiR RpiR-like pro 20.7 6E+02 0.013 23.0 8.8 28 713-740 74-101 (139)
250 cd03409 Chelatase_Class_II Cla 20.5 2.1E+02 0.0046 24.8 5.3 25 704-728 36-60 (101)
251 cd00860 ThrRS_anticodon ThrRS 20.4 1.6E+02 0.0035 24.9 4.3 46 704-749 6-52 (91)
252 KOG2914 Predicted haloacid-hal 20.3 4.5E+02 0.0097 27.2 8.1 35 711-745 93-127 (222)
253 PRK15122 magnesium-transportin 20.2 3.6E+02 0.0078 34.4 9.0 117 74-198 70-197 (903)
No 1
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=1.1e-157 Score=1394.84 Aligned_cols=852 Identities=60% Similarity=0.994 Sum_probs=764.7
Q ss_pred CCceeEEEeCCCCCccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCchhhHHHHHH
Q 002392 34 RGFARVVYCNDPDNPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVV 113 (928)
Q Consensus 34 ~~~~r~v~~n~~~~~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~v 113 (928)
+..+|+|+.|++...+.+..+|++|+|+|+|||+++|||++||+||+|++|+|||++++++++|+++++++++++||+++
T Consensus 11 ~~~~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~pl~~v 90 (1151)
T KOG0206|consen 11 PGFSRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLVPLLFV 90 (1151)
T ss_pred CCCceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceeeceeee
Confidence 35579999999965555667899999999999999999999999999999999999999999998899999999999999
Q ss_pred HHHHHhHHHHHHHHHhhhhHHHhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEecc
Q 002392 114 IGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMN 193 (928)
Q Consensus 114 l~i~~~~~~~~~~~r~~~~~~~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~ 193 (928)
+.++++||++||++|+++|+++|+.++.|+++++.++...|++|+|||+|++.++|.+|||++||+||+++|.|||+|++
T Consensus 91 l~~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~n 170 (1151)
T KOG0206|consen 91 LGITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETAN 170 (1151)
T ss_pred ehHHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEee
Confidence 99999999999999999999999999999995455999999999999999999999999999999999999999999999
Q ss_pred CCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEE
Q 002392 194 LDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVV 273 (928)
Q Consensus 194 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv 273 (928)
|||||++|.|++...+......+.+..++|.|+||+||.++|.|.|++..++...|++++|+++|||+++||.|++|+|+
T Consensus 171 LDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv 250 (1151)
T KOG0206|consen 171 LDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVV 250 (1151)
T ss_pred cCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEE
Confidence 99999999999988887755667788999999999999999999999998887669999999999999999999999999
Q ss_pred EecCccceeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCc
Q 002392 274 FTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRA 353 (928)
Q Consensus 274 ~tG~~Tki~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 353 (928)
+||++||+|+|...++.|++.+++.+|..+..++++++++|+++++...+|......+.. ..||+..+. .
T Consensus 251 ~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~---------~ 320 (1151)
T KOG0206|consen 251 FTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNG-EWWYLSPSE---------A 320 (1151)
T ss_pred EcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccC-chhhhcCch---------H
Confidence 999999999999999999999999999999999999999999999999998875432211 356665431 3
Q ss_pred hhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCcccc
Q 002392 354 PLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTC 433 (928)
Q Consensus 354 ~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~ 433 (928)
....+..|+++++++..++|+||++++++++.+|+.++.+|.+||+++.+.++.+|+++++|+||+|+||++|||||||+
T Consensus 321 ~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~ 400 (1151)
T KOG0206|consen 321 AYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQ 400 (1151)
T ss_pred HHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCcccc
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchh
Q 002392 434 NSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSD 513 (928)
Q Consensus 434 n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 513 (928)
|.|.|++|+++|..|+...++.+....++.+ . . ... ...+++.|.|+++.++.+...++..
T Consensus 401 N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~--------------~---~-~~~-~~~~~~~f~~~~~~~~~~~~~~~~~ 461 (1151)
T KOG0206|consen 401 NSMEFKKCSINGTSYGRNVTEVEAALAKRSG--------------G---D-VNE-HKIKGFTFEDSRLVDGLWSSEPQAE 461 (1151)
T ss_pred ceeeeecccccCcccccCCChhhcccCcccc--------------c---c-ccc-cccccceeccchhhccccccccCcc
Confidence 9999999999999999865543222111100 0 0 011 4466788999999999888888899
Q ss_pred HHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEee
Q 002392 514 VIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVL 593 (928)
Q Consensus 514 ~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~ 593 (928)
...+|++++|+||++.++.+++.+...|+++||||.||+++|+.+|+.+..|+++.+.+...+ .+.+|++|+++
T Consensus 462 ~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g------~~~~y~lL~iL 535 (1151)
T KOG0206|consen 462 DILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELG------VEETYELLNVL 535 (1151)
T ss_pred hHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccc------cceeEEEEEEe
Confidence 999999999999999999876666899999999999999999999999999999999999555 25899999999
Q ss_pred cccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHH
Q 002392 594 EFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEF 673 (928)
Q Consensus 594 ~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~ 673 (928)
||+|.|||||||||.|+|++.+||||||++|++++........+...+|+++||.+||||||+|||+++++||.+|+++|
T Consensus 536 eF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~ 615 (1151)
T KOG0206|consen 536 EFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERY 615 (1151)
T ss_pred ccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987778889999999999999999999999999999999999999
Q ss_pred HHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccC
Q 002392 674 LKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQE 753 (928)
Q Consensus 674 ~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~ 753 (928)
.+|++++ .||+++++++++.+|+||+++|.++|||+||+||+++|..|++||||+||+|||+.+||++||.+|+++.++
T Consensus 616 ~~A~ts~-~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~ 694 (1151)
T KOG0206|consen 616 NEAKTSL-TDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQD 694 (1151)
T ss_pred HHHHhhc-cCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCC
Confidence 9999999 699999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhc
Q 002392 754 MKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI 833 (928)
Q Consensus 754 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~ 833 (928)
+.++.++..+.+.. ...+... ...+.+................. ...+++|+|+++.++++++....|..++.
T Consensus 695 m~~i~i~~~~~~~~-----~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~-~~~aLVIDGktl~~aL~~~~~~~Fl~la~ 767 (1151)
T KOG0206|consen 695 MKLIIINTETSEEL-----SSLDATA-ALKETLLRKFTEELEEAKLEHSE-KPFALVIDGKTLAYALEDELRKKFLELAK 767 (1151)
T ss_pred ceEEEEecCChhhh-----cchhhHH-HHHHHHHHhhhHHHHHHhhccCc-CCceEEEECHHHHhhhCchhhHHHHHHHH
Confidence 99999987764311 1111111 12222322222211111111111 36899999999999999988899999999
Q ss_pred cCCceEEEeeCcccHHHHHHHH-hcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccccchhhhhh
Q 002392 834 DCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLV 912 (928)
Q Consensus 834 ~~~~~i~~r~~p~qK~~iv~~l-~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~l~~lll~ 912 (928)
.|++++|||++|.||+.+|+.+ +..+.+++|||||+||++|||+||||||++|.|+.||.++|||.|.+|++|.+|||+
T Consensus 768 ~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLV 847 (1151)
T KOG0206|consen 768 RCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLV 847 (1151)
T ss_pred hcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhhee
Confidence 9999999999999999999999 578899999999999999999999999999999999999999999999999999999
Q ss_pred hchhhhhhcccccccC
Q 002392 913 HGHWCYRRISMMVKLP 928 (928)
Q Consensus 913 ~Gr~~~~~i~~~i~y~ 928 (928)
||||+|.|++++++|.
T Consensus 848 HGhW~Y~R~a~~ilyf 863 (1151)
T KOG0206|consen 848 HGHWSYIRLAKMILYF 863 (1151)
T ss_pred ecceeHHHHHHHHHHH
Confidence 9999999999999884
No 2
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=4.2e-148 Score=1365.23 Aligned_cols=853 Identities=40% Similarity=0.640 Sum_probs=714.8
Q ss_pred CCceeEEEeCCCCCccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc-CCCCCCchhhHHHHH
Q 002392 34 RGFARVVYCNDPDNPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LAPYSAPSVLAPLIV 112 (928)
Q Consensus 34 ~~~~r~v~~n~~~~~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~-~~~~~~~~~~~~l~~ 112 (928)
..+.|.|++|++... +...+|++|.|+|+|||+|+|||++||+||++++|+|||+++++|++| +++.+++++++||++
T Consensus 67 ~~~~r~i~~~~~~~~-~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~ 145 (1178)
T PLN03190 67 DEDARLVYLNDPEKS-NERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAF 145 (1178)
T ss_pred cCCceEEEcCCCCcc-cccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHH
Confidence 345799999987422 234479999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHHHHhHHHHHHHHHhhhhHHHhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEec
Q 002392 113 VIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETM 192 (928)
Q Consensus 113 vl~i~~~~~~~~~~~r~~~~~~~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s 192 (928)
+++++++++++||++|+++|+.+|+++++|++ +|.+++++|++|+|||||+|++||.||||++||+|++++|.|+|||+
T Consensus 146 vl~v~~ike~~Ed~~r~k~d~~~N~~~~~v~~-~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts 224 (1178)
T PLN03190 146 VLLVTAVKDAYEDWRRHRSDRIENNRLAWVLV-DDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTI 224 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHhHHhhcCcEEEEEE-CCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEcc
Confidence 99999999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred cCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEE
Q 002392 193 NLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVV 272 (928)
Q Consensus 193 ~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvV 272 (928)
+|||||+||.|.+++.+... ......++|.|+||.||++++.|.|++.++|...+++.+|+++|||.|+||+|++|+|
T Consensus 225 ~LdGEt~~k~k~~~~~~~~~--~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvV 302 (1178)
T PLN03190 225 NLDGESNLKTRYAKQETLSK--IPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVA 302 (1178)
T ss_pred ccCCeeeeeEecccchhhhc--chhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEE
Confidence 99999999999988766421 1223567899999999999999999999999999999999999999999999999999
Q ss_pred EEecCccceeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCC-------
Q 002392 273 VFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDAT------- 345 (928)
Q Consensus 273 v~tG~~Tki~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~------- 345 (928)
+|||+|||+++|...++.|+|++|+.+|+++.+++++++++|++++++..+|.....++ .||+.+....
T Consensus 303 VYTG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~----~~yl~~~~~~~~~~~~~ 378 (1178)
T PLN03190 303 VYCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDE----LDTIPFYRRKDFSEGGP 378 (1178)
T ss_pred EEechhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccc----ccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999998887776432222 3444321100
Q ss_pred cccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEe
Q 002392 346 VFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILS 425 (928)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~ 425 (928)
..++...+....+..|+.+++++..+||++|++++++++++|+++|.+|.+||+++.+.++.+|+++++|+||+|+|||+
T Consensus 379 ~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfS 458 (1178)
T PLN03190 379 KNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFS 458 (1178)
T ss_pred cccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEE
Confidence 00000111123456788889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhccc
Q 002392 426 DKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQ 505 (928)
Q Consensus 426 DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 505 (928)
|||||||+|+|.|++|+++|..|+......+... .......+ .... ......+.++.+....
T Consensus 459 DKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~-~~~~~~~~--------~~~~---------~~~~~~~~~~~~~~~~ 520 (1178)
T PLN03190 459 DKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDH-AGYSVEVD--------GKIL---------RPKMKVKVDPQLLELS 520 (1178)
T ss_pred cCCCccccceEEEEEEEECCEEcccccccchhhh-hccccccc--------cccc---------cccccccCCHHHHhhh
Confidence 9999999999999999999999975321110000 00000000 0000 0000011222222211
Q ss_pred C--CCCCchhHHHHHHHHHhhhcccccCCCCC--C---CceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCC
Q 002392 506 W--VNEPHSDVIQKFFRVLAICHTAIPDVNEE--T---GEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPV 578 (928)
Q Consensus 506 ~--~~~~~~~~~~~~~~~l~lc~~~~~~~~~~--~---~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~ 578 (928)
. ...+..+.+.+|+.++++||++.+...++ . ..+.|+++||||.||+++|+.+|+.+..|+++.+.+...+.
T Consensus 521 ~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~- 599 (1178)
T PLN03190 521 KSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGE- 599 (1178)
T ss_pred hccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccc-
Confidence 1 11122345788999999999998853211 1 24679999999999999999999999999999998887654
Q ss_pred cccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhccc-chhhHHHHHHHHHHHHhcCCeeeEEE
Q 002392 579 SGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH-GQQFEAETRRHINRYAEAGLRTLVIA 657 (928)
Q Consensus 579 ~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~-~~~~~~~~~~~l~~~~~~Glr~l~~A 657 (928)
..+|++++++||+|+|||||||++++++++++|+||||+.|+++|+.. +...++.+.+++++|+.+|+|||++|
T Consensus 600 -----~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA 674 (1178)
T PLN03190 600 -----RQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVG 674 (1178)
T ss_pred -----eecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEE
Confidence 478999999999999999999999988999999999999999999754 33567788999999999999999999
Q ss_pred EEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcH
Q 002392 658 YRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKM 737 (928)
Q Consensus 658 ~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~ 737 (928)
||.++++++.+|..+|.+|..++ .+|++.++++.+.+|+||+++|+++++|+||++++++|+.|+++||++||+|||+.
T Consensus 675 ~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~ 753 (1178)
T PLN03190 675 MRELNDSEFEQWHFSFEAASTAL-IGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQ 753 (1178)
T ss_pred EEeCCHHHHhhHHHHHHHhhhhh-hhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCH
Confidence 99999999999999999999998 89999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHh---h-hhhccccccccceEEEEEcc
Q 002392 738 ETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIRE---G-ISQVNSAKESKVTFGLVIDG 813 (928)
Q Consensus 738 ~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~vi~g 813 (928)
+||++||++|||+.+++..+.++.+..+... ..+....... ..... . ...............++++|
T Consensus 754 ~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~-------~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG 824 (1178)
T PLN03190 754 ETAISIGYSSKLLTNKMTQIIINSNSKESCR-------KSLEDALVMS--KKLTTVSGISQNTGGSSAAASDPVALIIDG 824 (1178)
T ss_pred HHHHHHHHHhCCCCCCCeeEEecCCchhhHH-------HHHHHHhhhh--hhccccccccccccccccccCCceEEEEEc
Confidence 9999999999999998888877665432110 0000000000 00000 0 00000011123456899999
Q ss_pred chhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcC-CCEEEEEcCChhcHHHHHhCCeeEEecCCcchhh
Q 002392 814 KSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGT-GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQA 892 (928)
Q Consensus 814 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~-g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~a 892 (928)
.++..+++.++.+.|.+++..|+++||||++|.||+++|+.+++. +++|+|||||+||++||++||||||++|+|+.||
T Consensus 825 ~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA 904 (1178)
T PLN03190 825 TSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQA 904 (1178)
T ss_pred HHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHH
Confidence 999999888888899999999999999999999999999999665 6899999999999999999999999999999999
Q ss_pred hhcCcEeecccccchhhhhhhchhhhhhcccccccC
Q 002392 893 VMSSDYAIAQFRFLERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 893 k~aAD~vi~~f~~l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
+.+|||+|.+|++|.+||++||||+|+|++++++|+
T Consensus 905 ~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~ 940 (1178)
T PLN03190 905 VMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYN 940 (1178)
T ss_pred HHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999884
No 3
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=3.2e-139 Score=1304.36 Aligned_cols=829 Identities=55% Similarity=0.878 Sum_probs=709.0
Q ss_pred CCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc-CCCCCCchhhHHHHHHHHHHHhHHHHHHHHHhhhhH
Q 002392 55 YRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRKQDI 133 (928)
Q Consensus 55 ~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~-~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~r~~~~~ 133 (928)
|++|.|+|+||++|+|||++||+||++++|+|||+++++|++| +++.+++++++||+++++++++++++||++|+++|+
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 7899999999999999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred HHhcceeEEEccC-CeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeeccchhhccC
Q 002392 134 EANNRKVKVYGQD-HTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHL 212 (928)
Q Consensus 134 ~~n~~~~~v~r~~-g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~ 212 (928)
++|+++++|+| + |++++++|++|+|||||+|++||.||||++||+|++++|.|+||||+|||||+|+.|.+...+...
T Consensus 81 ~~n~~~~~v~~-~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~ 159 (1057)
T TIGR01652 81 EVNNRLTEVLE-GHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKM 159 (1057)
T ss_pred HHhCcEEEEEC-CCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhcc
Confidence 99999999999 6 899999999999999999999999999999999999999999999999999999999998777655
Q ss_pred CChhhhccceEEEEeecCCCCceeEEEEEEECC-eEeecCcccccccCceeecCCeEEEEEEEecCccceeecCCCCCCc
Q 002392 213 RDEESFQKFTAVIKCEDPNERLYSFVGTLQYEG-KQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSK 291 (928)
Q Consensus 213 ~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g-~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~~~~~~~~~k 291 (928)
.....+..++|.|+||.||++++.|.|++.+++ ...|++.+|+++|||.++||+|++|+|+|||++||+++|...++.|
T Consensus 160 ~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~k 239 (1057)
T TIGR01652 160 LDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSK 239 (1057)
T ss_pred CChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCccc
Confidence 556667788999999999999999999999988 7789999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHHHHHHHHHHhcc
Q 002392 292 RSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 371 (928)
Q Consensus 292 ~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~ 371 (928)
+|++++.+|+++.+++.+++++|++++++..+|...... ..||+..+.. ...+....+..|++++++++.+
T Consensus 240 ~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~----~~~yl~~~~~-----~~~~~~~~~~~~~~~~~L~~~~ 310 (1057)
T TIGR01652 240 RSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGK----DLWYIRLDVS-----ERNAAANGFFSFLTFLILFSSL 310 (1057)
T ss_pred ccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCC----CccceecCcc-----cccchhHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999998887777643222 2688754321 1222334566889999999999
Q ss_pred ccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEEEEEcCeeccCc
Q 002392 372 IPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRV 451 (928)
Q Consensus 372 iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~ 451 (928)
||++|++++++++.++++++++|.+|++++..+++.+|+++++|+||+|+|||+|||||||+|+|+|++|+++|..|+..
T Consensus 311 IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~ 390 (1057)
T TIGR01652 311 IPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDG 390 (1057)
T ss_pred cceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCC
Confidence 99999999999999999999999999987777899999999999999999999999999999999999999999999854
Q ss_pred chHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHHHHhhhcccccC
Q 002392 452 MTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPD 531 (928)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~ 531 (928)
..+......+..+...+.. .. .....+..+|.++.+.+....+.+..+.+.+|+.++++||++.+.
T Consensus 391 ~~~~~~~~~~~~~~~~~~~-------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~ 456 (1057)
T TIGR01652 391 FTEIKDAIRERLGSYVENE-------------NS-MLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPE 456 (1057)
T ss_pred cchHHHHhhhccccccccc-------------cc-ccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCccccc
Confidence 3322111111100000000 00 000011234556555544332334456688999999999999987
Q ss_pred C-CCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeE--EEecCCCcccccceEEEEeEeecccCCcceeEEEEEc
Q 002392 532 V-NEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSIS--LHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRN 608 (928)
Q Consensus 532 ~-~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~ 608 (928)
. ++..+.+.|+++||+|.||+++|+.+|+.+.+|+.+.+. +...+. ...|++++++||+|+|||||||+++
T Consensus 457 ~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~------~~~~~il~~~pF~s~rKrmSviv~~ 530 (1057)
T TIGR01652 457 FNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGE------TKEYEILNVLEFNSDRKRMSVIVRN 530 (1057)
T ss_pred ccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCC------EEEEEEEEecccCCCCCeEEEEEEe
Confidence 5 222234789999999999999999999999999887443 433333 4789999999999999999999999
Q ss_pred CCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHH
Q 002392 609 PENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALV 688 (928)
Q Consensus 609 ~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~ 688 (928)
+++++++|+||||+.|+++|+..++..++.+.+++++|+.+|+|||++|||.++++|+.+|.++|++|+.++ .+|++.+
T Consensus 531 ~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~~ 609 (1057)
T TIGR01652 531 PDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTAL-TDREEKL 609 (1057)
T ss_pred CCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhh-hhHHHHH
Confidence 888999999999999999998654556788899999999999999999999999999999999999999988 7999999
Q ss_pred HHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhH
Q 002392 689 ASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEA 768 (928)
Q Consensus 689 ~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~ 768 (928)
++..+.+|+||+|+|++++||+||++++++|+.|++|||++||+|||+.+||++||++|||++++...+.++++..+...
T Consensus 610 ~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~ 689 (1057)
T TIGR01652 610 DVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATR 689 (1057)
T ss_pred HHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999988888777776432111
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccH
Q 002392 769 LEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQK 848 (928)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK 848 (928)
.. ...+ ............ .........++++|++++.+++++..++|.+++..|+++||||++|+||
T Consensus 690 ~~----~~~i--------~~~~~~~~~~~~-~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK 756 (1057)
T TIGR01652 690 SV----EAAI--------KFGLEGTSEEFN-NLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQK 756 (1057)
T ss_pred HH----HHHH--------HHHHHHHHHhhh-hhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHH
Confidence 00 0000 000000000000 0112345689999999999888777888999999999999999999999
Q ss_pred HHHHHHHhcC-CCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccccchhhhhhhchhhhhhccccccc
Q 002392 849 ALVTRLVKGT-GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 849 ~~iv~~l~~~-g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
+++|+.+|+. |++|+|||||+||++||++||||||+.|+|+.||+.+|||+|.+|++|.+||++|||++|+|+++++.|
T Consensus 757 ~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~ 836 (1057)
T TIGR01652 757 ADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILY 836 (1057)
T ss_pred HHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 9999999776 999999999999999999999999999999999999999999999999999889999999999999987
No 4
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.2e-134 Score=1085.20 Aligned_cols=781 Identities=37% Similarity=0.577 Sum_probs=685.2
Q ss_pred ceeEEEeCCCCCccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc-CCCCCCchhhHHHHHHH
Q 002392 36 FARVVYCNDPDNPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LAPYSAPSVLAPLIVVI 114 (928)
Q Consensus 36 ~~r~v~~n~~~~~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~-~~~~~~~~~~~~l~~vl 114 (928)
..|.+.+.... ..++.+|++|.+++.||++++|+|..|++||+.+.|+|||++++.|++| +......+++.||.|++
T Consensus 62 ~~rt~~~~~~~--~~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl 139 (1051)
T KOG0210|consen 62 HGRTVNISFGP--HYRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVL 139 (1051)
T ss_pred cCceeecccCC--CcccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHH
Confidence 34666655532 2356789999999999999999999999999999999999999999999 55556788999999999
Q ss_pred HHHHhHHHHHHHHHhhhhHHHhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccC
Q 002392 115 GATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNL 194 (928)
Q Consensus 115 ~i~~~~~~~~~~~r~~~~~~~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~L 194 (928)
++++++|+++|++|++.|+..|++.++++.++|.... ++++|+|||+|.+.+|++||||+++|.+|+.+|.|+|.|..|
T Consensus 140 ~itl~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQL 218 (1051)
T KOG0210|consen 140 TITLIKEAVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQL 218 (1051)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEecccc
Confidence 9999999999999999999999999999975665444 999999999999999999999999999999999999999999
Q ss_pred CCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECC--eEeecCcccccccCceeecCCeEEEEE
Q 002392 195 DGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEG--KQYPLSPQQILLRDSKLKNTDYVYGVV 272 (928)
Q Consensus 195 tGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g--~~~~l~~~n~~~rgs~l~~t~~~~gvV 272 (928)
||||+||.|-|.+.++++.++..+..++ |..|.|++++|.|-||+.+.. +..+|+.+|.+|.++.+.. +.++|+|
T Consensus 219 DGETDWKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs-~t~~gvV 295 (1051)
T KOG0210|consen 219 DGETDWKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVAS-GTAIGVV 295 (1051)
T ss_pred CCcccceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEec-CcEEEEE
Confidence 9999999999999999998888877776 899999999999999999953 3579999999999999995 4599999
Q ss_pred EEecCccceeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCC
Q 002392 273 VFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRR 352 (928)
Q Consensus 273 v~tG~~Tki~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 352 (928)
+|||.||+-+||...++.|.+.++..+|-+..+++.++++++++.....++- ..||.
T Consensus 296 vYTG~dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~----------~~wyi------------- 352 (1051)
T KOG0210|consen 296 VYTGRDTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFG----------SDWYI------------- 352 (1051)
T ss_pred EEecccHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcCC----------CchHH-------------
Confidence 9999999999999999999999999999999999999888887776544332 16886
Q ss_pred chhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccc
Q 002392 353 APLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLT 432 (928)
Q Consensus 353 ~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT 432 (928)
.+++++.+++.+||++|.+.++++++..++.+..|.++ .+..+|++++.|+||+|+|+++|||||||
T Consensus 353 -------~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTGTLT 419 (1051)
T KOG0210|consen 353 -------YIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTGTLT 419 (1051)
T ss_pred -------HHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCC------CceeeecCCChHHhcceEEEEecCcCccc
Confidence 89999999999999999999999999999999988866 46899999999999999999999999999
Q ss_pred cceeEEEEEEEcCeeccCcc-hHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCc
Q 002392 433 CNSMEFVKCSVAGVAYGRVM-TEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPH 511 (928)
Q Consensus 433 ~n~m~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 511 (928)
+|+|.+++++.+...|+.+. .++++....-...... + .+.. ......+.
T Consensus 420 qNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~--~-------------------~~~~---------~~~~k~~~ 469 (1051)
T KOG0210|consen 420 QNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRN--K-------------------GKGA---------LSRVKKDM 469 (1051)
T ss_pred cchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcc--c-------------------cccc---------chhhcCcc
Confidence 99999999999999988654 3333333222111000 0 0000 00112344
Q ss_pred hhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeE
Q 002392 512 SDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLH 591 (928)
Q Consensus 512 ~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 591 (928)
+..+.++..++|+||+++|..++ .+...|++.||||.||+++.+..|..+..|+...+.++..... ...|++|.
T Consensus 470 s~rv~~~V~alalCHNVTPv~e~-~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~-----~~~yqIL~ 543 (1051)
T KOG0210|consen 470 SARVRNAVLALALCHNVTPVFED-DGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDD-----ELNYQILQ 543 (1051)
T ss_pred cHHHHHHHHHHHHhccCCcccCC-CceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCc-----ceeEEEEE
Confidence 56788999999999999998765 3689999999999999999999999999999999999877554 68999999
Q ss_pred eecccCCcceeEEEEEcC-CCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHH
Q 002392 592 VLEFTSSRKRMSVMVRNP-ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWE 670 (928)
Q Consensus 592 ~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~ 670 (928)
+|||+|++|||++||+++ .+++.+|.||||.+|......+ +++++....+|++|+|||++|+|.++++||+.|.
T Consensus 544 vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N-----dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe 618 (1051)
T KOG0210|consen 544 VFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN-----DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFE 618 (1051)
T ss_pred EeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc-----hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHH
Confidence 999999999999999997 7899999999999998776653 5788888999999999999999999999999999
Q ss_pred HHHHHHhhhccccHHHHHHHHHH-HhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 671 KEFLKAKTSVTSDREALVASAAE-KIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 671 ~~~~~a~~~~~~~r~~~~~~~~~-~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
..|++|+-++ .||++++..+.+ .+|+||+++|++|+||+||++++-+++.||+||||+||+|||+.+||+.||++.++
T Consensus 619 ~~y~~A~lSi-~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L 697 (1051)
T KOG0210|consen 619 EAYNAAKLSI-SDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRL 697 (1051)
T ss_pred HHHHhhhCcc-chHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccc
Confidence 9999999999 899999999888 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHH
Q 002392 750 LRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFL 829 (928)
Q Consensus 750 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~ 829 (928)
+..++.+..+..-....... .++.. .......+++|+|+++...++ +.+++|.
T Consensus 698 ~sR~q~ihv~~~v~sr~dah------------------~eL~~--------lR~k~~~aLvi~G~Sl~~cl~-yye~Ef~ 750 (1051)
T KOG0210|consen 698 FSRGQYIHVIRSVTSRGDAH------------------NELNN--------LRRKTDCALVIDGESLEFCLK-YYEDEFI 750 (1051)
T ss_pred eecCceEEEEEecCCchHHH------------------HHHHH--------hhcCCCcEEEEcCchHHHHHH-HHHHHHH
Confidence 99999888886554211100 00000 012345789999999998875 6788899
Q ss_pred HhhccCCceEEEeeCcccHHHHHHHH-hcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccccchh
Q 002392 830 DLAIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLER 908 (928)
Q Consensus 830 ~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~l~~ 908 (928)
++...+.++||||++|.||+++++.+ +..|+.|+|||||.||++|||+||+|||+-|+|+.||.-||||.|.+|+++.+
T Consensus 751 el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~r 830 (1051)
T KOG0210|consen 751 ELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSR 830 (1051)
T ss_pred HHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHHH
Confidence 99999999999999999999999999 77899999999999999999999999999999999999999999999999999
Q ss_pred hhhhhchhhhhhccccccc
Q 002392 909 LLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 909 lll~~Gr~~~~~i~~~i~y 927 (928)
||++|||.+|+|.+++.+|
T Consensus 831 LLl~HGR~SYkrsa~laqf 849 (1051)
T KOG0210|consen 831 LLLWHGRNSYKRSAKLAQF 849 (1051)
T ss_pred HhhccccchHHHHHHHHHH
Confidence 9999999999999887543
No 5
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-100 Score=932.25 Aligned_cols=641 Identities=30% Similarity=0.419 Sum_probs=521.8
Q ss_pred cccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc--CCCCCCchhhHHHHHHHHHHHhHHHHHHH
Q 002392 49 EVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP--LAPYSAPSVLAPLIVVIGATMAKEGVEDW 126 (928)
Q Consensus 49 ~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~--~~~~~~~~~~~~l~~vl~i~~~~~~~~~~ 126 (928)
.+|+..||.|.+...+...+. +.++.||.+++++.++++++++++. +.+.. .....++++++++.+..+++++
T Consensus 51 ~~r~~~~G~N~~~~~~~~~~~---~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~--~~~~~I~~~i~~n~~~g~~qe~ 125 (917)
T COG0474 51 KRRLKKYGPNELPEEKKRSLL---KKFLRQFKDPFIILLLVAALLSAFVGDWVDAG--VDAIVILLVVVINALLGFVQEY 125 (917)
T ss_pred HHHHhhcCCccccccccCcHH---HHHHHHHHHHHHHHHHHHHHHHHHhhcccccC--cceeeehHHHHHHHHHHHHHHH
Confidence 467788999999977654433 7888999999999999999999875 22211 3344455566666666778888
Q ss_pred HHhhh---hHHHhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceee
Q 002392 127 RRRKQ---DIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLK 203 (928)
Q Consensus 127 ~r~~~---~~~~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K 203 (928)
+..++ ++.+.+.+++|+| ||++++|+|++|+|||||+|++||.||||++||++++ .+||||+|||||.|+.|
T Consensus 126 ~a~~~l~~lk~~~~~~~~V~R-~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv~K 200 (917)
T COG0474 126 RAEKALEALKKMSSPKAKVLR-DGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEK 200 (917)
T ss_pred HHHHHHHHHHhhccCceEEEe-CCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcchhc
Confidence 88655 6666789999999 9999999999999999999999999999999999775 59999999999999999
Q ss_pred ccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccceee
Q 002392 204 RSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ 283 (928)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~~ 283 (928)
.+..... .+.|. .++..|++++||.++++. +.|+|++||.+|++++
T Consensus 201 ~~~~~~~----------------~~~~~-----------------~~d~~n~l~sGt~V~~G~-~~giVvaTG~~T~~G~ 246 (917)
T COG0474 201 QALPLTK----------------SDAPL-----------------GLDRDNMLFSGTTVVSGR-AKGIVVATGFETEFGK 246 (917)
T ss_pred ccccccc----------------ccccc-----------------cCCccceEEeCCEEEcce-EEEEEEEEcCccHHHH
Confidence 9765431 11111 045566777777776433 9999999999998877
Q ss_pred cCCC---CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHH
Q 002392 284 NATD---PPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360 (928)
Q Consensus 284 ~~~~---~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 360 (928)
+... .....+|+++.++++..+++.+.++++++.++...+... . .| ...
T Consensus 247 ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~-~-------~~--------------------~~~ 298 (917)
T COG0474 247 IARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGG-N-------GL--------------------LES 298 (917)
T ss_pred HHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-c-------cH--------------------HHH
Confidence 6644 225789999999999999999998888888776632211 1 13 337
Q ss_pred HHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEE
Q 002392 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVK 440 (928)
Q Consensus 361 ~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~ 440 (928)
|.+++++++.+||++||+++++++.+++.+| +++++++|+++++|+||++++||||||||||+|+|+|++
T Consensus 299 ~~~~v~l~va~IPegLp~~vti~la~g~~~m----------ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~ 368 (917)
T COG0474 299 FLTALALAVAAVPEGLPAVVTIALALGAQRM----------AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKK 368 (917)
T ss_pred HHHHHHHHHhccccchHHHHHHHHHHHHHHH----------HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEE
Confidence 9999999999999999999999999999999 888999999999999999999999999999999999999
Q ss_pred EEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHH
Q 002392 441 CSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFR 520 (928)
Q Consensus 441 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 520 (928)
+++.+. +.... + ......+...+++.
T Consensus 369 ~~~~~~--~~~~~--------------------------------------------~--------~~~~~~~~~~~~l~ 394 (917)
T COG0474 369 IYINGG--GKDID--------------------------------------------D--------KDLKDSPALLRFLL 394 (917)
T ss_pred EEeCCC--ccccc--------------------------------------------c--------cccccchHHHHHHH
Confidence 998851 00000 0 00012233447899
Q ss_pred HHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcc
Q 002392 521 VLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRK 600 (928)
Q Consensus 521 ~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk 600 (928)
++++||++.+..+ . .+..+||+|.||++++.+.|+.+ .. ......|++++.+||+|+||
T Consensus 395 ~~~lc~~~~~~~~-~----~~~~gdptE~Al~~~a~~~~~~~-~~---------------~~~~~~~~~~~~~PFdS~rK 453 (917)
T COG0474 395 AAALCNSVTPEKN-G----WYQAGDPTEGALVEFAEKLGFSL-DL---------------SGLEVEYPILAEIPFDSERK 453 (917)
T ss_pred HHHhcCccccccc-C----ceecCCccHHHHHHHHHhcCCcC-CH---------------HHHhhhcceeEEecCCCCce
Confidence 9999999988654 2 56678999999999999998744 10 11235678899999999999
Q ss_pred eeEEEEEcCCCcEEEEEecCchhhHHHhcc------cchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHH
Q 002392 601 RMSVMVRNPENQLLLLCKGADSVMFERLSK------HGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFL 674 (928)
Q Consensus 601 rmsviv~~~~~~~~l~~KGa~~~i~~~~~~------~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~ 674 (928)
|||+|++..++++++++||||++|+++|+. ..++.++.+.+..++|+.+|||+|++|||.++..+..
T Consensus 454 rMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~------- 526 (917)
T COG0474 454 RMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKD------- 526 (917)
T ss_pred EEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccc-------
Confidence 999999987788999999999999999985 2345678889999999999999999999977664311
Q ss_pred HHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCc
Q 002392 675 KAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEM 754 (928)
Q Consensus 675 ~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~ 754 (928)
. .. +.+|+||+|+|+++|+||+|+++++||+.|++|||++||+|||+..||.+||++||+..+..
T Consensus 527 ---------~-----~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~ 591 (917)
T COG0474 527 ---------D-----EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAE 591 (917)
T ss_pred ---------c-----hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCC
Confidence 0 11 67899999999999999999999999999999999999999999999999999999854321
Q ss_pred eEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhcc
Q 002392 755 KQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAID 834 (928)
Q Consensus 755 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~ 834 (928)
. .++++|.+++.+.++++.+.+.+
T Consensus 592 ---------------------------------------------------~-~~vi~G~el~~l~~~el~~~~~~---- 615 (917)
T COG0474 592 ---------------------------------------------------S-ALVIDGAELDALSDEELAELVEE---- 615 (917)
T ss_pred ---------------------------------------------------c-eeEeehHHhhhcCHHHHHHHhhh----
Confidence 0 46899999998887765555544
Q ss_pred CCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeeccccc--chhhhhh
Q 002392 835 CASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF--LERLLLV 912 (928)
Q Consensus 835 ~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~--l~~lll~ 912 (928)
+. ||||++|+||.++|+.+|+.|++|+|+|||.||+||||+|||||||+++-.+.|+++||+++.+.++ +..+ +.
T Consensus 616 ~~--VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~a-v~ 692 (917)
T COG0474 616 LS--VFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLA-VV 692 (917)
T ss_pred Cc--EEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHH-HH
Confidence 33 9999999999999999999999999999999999999999999999753223389999999997555 5555 99
Q ss_pred hchhhhhhccccccc
Q 002392 913 HGHWCYRRISMMVKL 927 (928)
Q Consensus 913 ~Gr~~~~~i~~~i~y 927 (928)
|||++|.|+++++.|
T Consensus 693 eGR~~~~ni~k~i~~ 707 (917)
T COG0474 693 EGRRVYVNIKKFILY 707 (917)
T ss_pred HhHHHHHHHHHHHHH
Confidence 999999999999987
No 6
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-97 Score=827.26 Aligned_cols=691 Identities=23% Similarity=0.312 Sum_probs=540.1
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCchhhHHHHHHHHHHHhHHHHHHHH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWR 127 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~ 127 (928)
...|++.||.|++....-..++ +.+++||.++...++|+++++|++. .+|...+.+.++++++++..++++|+
T Consensus 29 v~~r~~~yG~Nel~~ee~~~~w---k~vLeQF~n~Li~iLL~sA~ISfvl----~~~~e~~vI~liiv~nvtVG~~QEy~ 101 (972)
T KOG0202|consen 29 VTRRRKKYGENELPAEEGESLW---KLVLEQFDNPLILILLLSAAISFVL----ADFDEPFVITLIIVINVTVGFVQEYN 101 (972)
T ss_pred HHHHHHhcCCccCccccCCcHH---HHHHHHHHhHHHHHHHHHHHHHHHH----Hhcccceeeeeeeeeeeeeeeeeehh
Confidence 3567889999999987765555 9999999999999999999999986 55666666777777888888999999
Q ss_pred HhhhhHHHh---cceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeec
Q 002392 128 RRKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKR 204 (928)
Q Consensus 128 r~~~~~~~n---~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~ 204 (928)
..|+..+++ +..++|+| +|+.+.+++++|||||||.|+-||+||||++|++..+ ..||||+|||||.|+.|.
T Consensus 102 aEkalEaLk~l~p~~~~V~R-~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~K~ 176 (972)
T KOG0202|consen 102 AEKALEALKELVPPMAHVLR-SGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVSKD 176 (972)
T ss_pred hHHHHHHHHhcCCccceEEe-cCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCccccccc
Confidence 999866664 88999999 9999999999999999999999999999999999887 899999999999999997
Q ss_pred cchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccceee-
Q 002392 205 SLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ- 283 (928)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~~- 283 (928)
......+ . .++..++....|+||.+..|+ +.|+|+.||.+|.++.
T Consensus 177 t~~v~~~--~-----------~~~~~dk~NiaFsGT~V~~G~---------------------a~GIVi~TG~nTeiG~I 222 (972)
T KOG0202|consen 177 TDAVPKD--E-----------NADVQDKKNIAFSGTLVVAGR---------------------AKGIVIGTGLNTEIGKI 222 (972)
T ss_pred CccccCC--C-----------CCccccceeeEeecceeecCc---------------------eeEEEEeccccchHHHH
Confidence 6442210 0 011123444678888888888 9999999999997632
Q ss_pred --cCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHH
Q 002392 284 --NATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVF-FGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360 (928)
Q Consensus 284 --~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~-~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 360 (928)
.....+..++|+|++++.+...+..++.++|+..+++ .+.+...- ++ ..|+ ...+..
T Consensus 223 ~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~--~~--g~~f----------------k~~~~~ 282 (972)
T KOG0202|consen 223 FKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPV--HG--GSWF----------------KGALYY 282 (972)
T ss_pred HHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhcccc--cc--ccch----------------hchhhh
Confidence 2344567789999999999999986666666666655 22222000 00 0232 234558
Q ss_pred HHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEE
Q 002392 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVK 440 (928)
Q Consensus 361 ~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~ 440 (928)
|..++++.+.+||.+||+.+++..+++..+| ++++++||.+..+|+||.+++||+|||||||+|+|.+.+
T Consensus 283 f~IaVsLAVAAIPEGLPaVvT~tLALG~~rM----------akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~ 352 (972)
T KOG0202|consen 283 FKIAVSLAVAAIPEGLPAVVTTTLALGTRRM----------AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSK 352 (972)
T ss_pred hhHHHHHHHHhccCCCcchhhhhHHHhHHHH----------HhhhhhhhcccchhhccceeEEecCCCCcccccceEEEE
Confidence 8899999999999999999999999999998 999999999999999999999999999999999999999
Q ss_pred EEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHH
Q 002392 441 CSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFR 520 (928)
Q Consensus 441 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 520 (928)
+++.+..+.... + .. ..+... ...+-.+.+.. .........+.+.++..
T Consensus 353 i~~~~~~~~~~~-~--f~---~tg~ty----------------------~~~g~v~~~~~---~~~~~~~~~~~l~~l~~ 401 (972)
T KOG0202|consen 353 IFIPDGGTATVD-E--FN---PTGTTY----------------------SPEGEVFKDGL---YEKDKAGDNDLLQELAE 401 (972)
T ss_pred EEeccccccccc-c--cc---cCCcee----------------------CCCCceEecCc---cccccccccHHHHHHHH
Confidence 998876544310 0 00 000000 00000010000 00011234567889999
Q ss_pred HHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcc
Q 002392 521 VLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRK 600 (928)
Q Consensus 521 ~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk 600 (928)
+.++||.+...+++. +.++-. +.|.|.||..+|++.|+.-.... ... -.+ +..+.+.....++...++||+|+||
T Consensus 402 i~~lCNda~v~~~~~-~~~~~~-G~pTE~AL~vlaeKm~l~~~~~~-~~s-~~~-~~~c~~~~~~~~~~~~elpFssdrK 476 (972)
T KOG0202|consen 402 ICALCNDATVEYNDA-DCYEKV-GEPTEGALIVLAEKMGLPGTRST-NLS-NEE-ASACNRVYSRLFKKIAELPFSSDRK 476 (972)
T ss_pred HHHhhhhhhhhcCch-hhHHhc-CCchHHHHHHHHHHcCCCcchhh-ccc-ccc-cccchhHHHHhhhheeEeecccccc
Confidence 999999998877664 334333 68999999999999998643310 110 011 2233344456778889999999999
Q ss_pred eeEEEEEcCCCc--EEEEEecCchhhHHHhccc-----------chhhHHHHHHHHHHHHhcCCeeeEEEEEccCH---H
Q 002392 601 RMSVMVRNPENQ--LLLLCKGADSVMFERLSKH-----------GQQFEAETRRHINRYAEAGLRTLVIAYRELGE---D 664 (928)
Q Consensus 601 rmsviv~~~~~~--~~l~~KGa~~~i~~~~~~~-----------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~---~ 664 (928)
+|||.+.++.++ ..+|+|||+|.|+++|+.. .+..++.+.+...+|+.+|||+|++|+++.+. +
T Consensus 477 ~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~ 556 (972)
T KOG0202|consen 477 SMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPD 556 (972)
T ss_pred eEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChh
Confidence 999999987654 8999999999999999542 23467889999999999999999999997774 1
Q ss_pred HHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHH
Q 002392 665 EYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIG 744 (928)
Q Consensus 665 ~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia 744 (928)
+...|. -.-+...|+||+|+|++|+.||+|++++++|+.|+++||+|.|+|||+.+||.+||
T Consensus 557 ~~~l~~------------------~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~ 618 (972)
T KOG0202|consen 557 DQDLND------------------TSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIA 618 (972)
T ss_pred hhhhcc------------------cccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH
Confidence 111110 01236789999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHH
Q 002392 745 YACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKL 824 (928)
Q Consensus 745 ~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~ 824 (928)
+++|+...+.. -...+++|++++.+..+++
T Consensus 619 r~iGi~~~~ed--------------------------------------------------~~~~~~TG~efD~ls~~~~ 648 (972)
T KOG0202|consen 619 REIGIFSEDED--------------------------------------------------VSSMALTGSEFDDLSDEEL 648 (972)
T ss_pred HHhCCCcCCcc--------------------------------------------------ccccccchhhhhcCCHHHH
Confidence 99998754321 0123677888877766555
Q ss_pred HHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec--CCcchhhhhcCcEeecc
Q 002392 825 EKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 825 ~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~--g~e~~~ak~aAD~vi~~ 902 (928)
..... +..+|+|++|++|.+||+.||+.|.+|+|.|||.||.|+|+.|||||||+ |+++ ||+|||.|+.|
T Consensus 649 ~~~~~------~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdV--aKeAsDMVL~D 720 (972)
T KOG0202|consen 649 DDAVR------RVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDV--AKEASDMVLAD 720 (972)
T ss_pred HHHhh------cceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHh--hHhhhhcEEec
Confidence 54333 34599999999999999999999999999999999999999999999995 7788 99999999997
Q ss_pred ccc--chhhhhhhchhhhhhccccccc
Q 002392 903 FRF--LERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 903 f~~--l~~lll~~Gr~~~~~i~~~i~y 927 (928)
++| +..+ +.+||.+|.|++++|.|
T Consensus 721 DnFstIvaA-VEEGr~IynNik~Fir~ 746 (972)
T KOG0202|consen 721 DNFSTIVAA-VEEGRAIYNNIKNFIRY 746 (972)
T ss_pred CcHHHHHHH-HHHhHHHHHHHHHHHHH
Confidence 554 8888 89999999999999987
No 7
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=5.4e-95 Score=893.19 Aligned_cols=707 Identities=19% Similarity=0.218 Sum_probs=520.1
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCchhhHHHHHHHHHHHhHHHHHHHH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWR 127 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~ 127 (928)
.++|+.+||.|.+..++...++ +.+++||.++++++++++++++++. +.|...+.++++++++++..++++++
T Consensus 32 a~~rl~~~G~N~l~~~~~~s~~---~~~l~q~~~~~~~iL~~aails~~~----~~~~~~~iIl~vv~in~~i~~~QE~~ 104 (1053)
T TIGR01523 32 AQHRLKEVGENRLEADSGIDAK---AMLLHQVCNAMCMVLIIAAAISFAM----HDWIEGGVISAIIALNILIGFIQEYK 104 (1053)
T ss_pred HHHHHHHcCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHH----hhHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4678899999999998765443 8999999999999999999999985 56667777888899999999999999
Q ss_pred HhhhhHHH---hcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeec
Q 002392 128 RRKQDIEA---NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKR 204 (928)
Q Consensus 128 r~~~~~~~---n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~ 204 (928)
.+++...+ .+.+++|+| ||++++|++++|||||||.|++||+||||++|+++++ +.||||+|||||.|+.|.
T Consensus 105 aekal~aL~~l~~~~~~ViR-dg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~pV~K~ 179 (1053)
T TIGR01523 105 AEKTMDSLKNLASPMAHVIR-NGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESLPVIKD 179 (1053)
T ss_pred HHHHHHHHhccCCCceEEEe-CCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCCceecc
Confidence 99986555 467899999 9999999999999999999999999999999999665 999999999999999998
Q ss_pred cchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccceeec
Q 002392 205 SLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQN 284 (928)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~~~ 284 (928)
+...... .. . ..........|+||.+++|+ +.|+|+.||.+|.+++.
T Consensus 180 ~~~~~~~-~~--~---------~~~~d~~n~lf~GT~V~~G~---------------------g~~vVvatG~~T~~GkI 226 (1053)
T TIGR01523 180 AHATFGK-EE--D---------TPIGDRINLAFSSSAVTKGR---------------------AKGICIATALNSEIGAI 226 (1053)
T ss_pred ccccccc-cc--c---------CCcccCCCccccCceEEeee---------------------EEEEEEEecCccHHHHH
Confidence 6421100 00 0 00011223457777777766 99999999999965332
Q ss_pred CC---CC-----C------------------------------CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 002392 285 AT---DP-----P------------------------------SKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETK 326 (928)
Q Consensus 285 ~~---~~-----~------------------------------~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 326 (928)
.. .. + ..+||+|+++++++.+++.+.++++++.+++..+
T Consensus 227 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~--- 303 (1053)
T TIGR01523 227 AAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF--- 303 (1053)
T ss_pred HHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---
Confidence 21 11 0 0149999999999999888877777766543211
Q ss_pred cccCCCcccccccCCCCCCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCc
Q 002392 327 RDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPA 406 (928)
Q Consensus 327 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i 406 (928)
. | ....+..++++++.++|++||++++++..+++.+| +++++
T Consensus 304 -~--------~-------------------~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rM----------ak~~~ 345 (1053)
T TIGR01523 304 -D--------V-------------------DKEVAIYAICLAISIIPESLIAVLSITMAMGAANM----------SKRNV 345 (1053)
T ss_pred -h--------h-------------------hHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH----------HhcCC
Confidence 0 0 01245677899999999999999999999999999 89999
Q ss_pred eeecccchhhccceeEEEecCCCccccceeEEEEEEEcCe-eccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCccc
Q 002392 407 RARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGV-AYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIV 485 (928)
Q Consensus 407 ~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (928)
+||+++++|+||.+++||+|||||||+|+|+++++++.+. .|....... .+. +. ..+ ............
T Consensus 346 lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~------~~~-~~-~g~--~~~~~~~~~~~~ 415 (1053)
T TIGR01523 346 IVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDD------AFN-PN-EGN--VSGIPRFSPYEY 415 (1053)
T ss_pred EeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCC------CCC-Cc-ccc--cccccccccccc
Confidence 9999999999999999999999999999999999998652 221100000 000 00 000 000000000000
Q ss_pred ccCCccCCccccchhhhcc-----c--C-CCCCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHH
Q 002392 486 ESGKSVKGFNFRDERIMNG-----Q--W-VNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAARE 557 (928)
Q Consensus 486 ~~~~~~~~~~~~~~~l~~~-----~--~-~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~ 557 (928)
+ .....++.+... . . .....++...+++.++++||++....++..+.+. ..++|+|.||+.+|.+
T Consensus 416 -~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~-~~GdptE~ALl~~a~~ 488 (1053)
T TIGR01523 416 -S-----HNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK-AHGDPTEIAIHVFAKK 488 (1053)
T ss_pred -c-----ccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee-eCcCccHHHHHHHHHH
Confidence 0 000000000000 0 0 0000123466789999999988764332222222 2479999999999999
Q ss_pred cCcEEEee-cCC--------e-eEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCC-cEEEEEecCchhhHH
Q 002392 558 VGFQFFGS-SQT--------S-ISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPEN-QLLLLCKGADSVMFE 626 (928)
Q Consensus 558 ~g~~~~~~-~~~--------~-~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~-~~~l~~KGa~~~i~~ 626 (928)
.|+..... ... . ..+.... ..+....|++++.+||+|+|||||++++.+++ ++++|+||||+.|++
T Consensus 489 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~ 565 (1053)
T TIGR01523 489 FDLPHNALTGEEDLLKSNENDQSSLSQHN---EKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIE 565 (1053)
T ss_pred cCCCcccccchhhhhhhcccccccccccc---ccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHH
Confidence 99743100 000 0 0000000 00113568999999999999999999997644 588999999999999
Q ss_pred Hhccc-----------chhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHh
Q 002392 627 RLSKH-----------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKI 695 (928)
Q Consensus 627 ~~~~~-----------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~i 695 (928)
+|+.. +++.++.+.+.+++|+.+|+|||++|||.++.+++..+ .+.. .. .+ .+.+
T Consensus 566 ~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~---~~-~~--------~~~~ 631 (1053)
T TIGR01523 566 CCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QLKN---ET-LN--------RATA 631 (1053)
T ss_pred hhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hhhc---cc-cc--------hhhh
Confidence 99742 22346778888999999999999999999987654221 1100 00 01 1457
Q ss_pred hcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcch
Q 002392 696 ERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDK 775 (928)
Q Consensus 696 E~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~ 775 (928)
|+||+|+|+++++|++|++++++|+.|+++||+|||+|||+..||.++|++|||+.++.. . ...
T Consensus 632 e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~--~-~~~------------- 695 (1053)
T TIGR01523 632 ESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFI--H-DRD------------- 695 (1053)
T ss_pred ccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccc--c-ccc-------------
Confidence 899999999999999999999999999999999999999999999999999999854310 0 000
Q ss_pred hHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH
Q 002392 776 ENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV 855 (928)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l 855 (928)
......+++|..++.+.++++.+... ...||||++|+||..+|+.+
T Consensus 696 ----------------------------~~~~~~vitG~~l~~l~~~~l~~~~~------~~~V~ar~sP~~K~~iV~~l 741 (1053)
T TIGR01523 696 ----------------------------EIMDSMVMTGSQFDALSDEEVDDLKA------LCLVIARCAPQTKVKMIEAL 741 (1053)
T ss_pred ----------------------------ccccceeeehHHhhhcCHHHHHHHhh------cCeEEEecCHHHHHHHHHHH
Confidence 00013589999988776555444322 23599999999999999999
Q ss_pred hcCCCEEEEEcCChhcHHHHHhCCeeEEec--CCcchhhhhcCcEeecc--cccchhhhhhhchhhhhhccccccc
Q 002392 856 KGTGKTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 856 ~~~g~~vlaiGDG~ND~~ml~~A~vGIam~--g~e~~~ak~aAD~vi~~--f~~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
++.|++|+|+|||.||++||++|||||||+ |++. |+++||+++.+ |+.+.++ +.|||++|+|+++++.|
T Consensus 742 q~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v--ak~aADivl~dd~f~~I~~~-i~~gR~~~~ni~k~i~y 814 (1053)
T TIGR01523 742 HRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV--AKDASDIVLSDDNFASILNA-IEEGRRMFDNIMKFVLH 814 (1053)
T ss_pred HhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHH--HHHhcCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999995 5565 99999999997 7779999 89999999999999987
No 8
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=9.6e-94 Score=885.99 Aligned_cols=677 Identities=20% Similarity=0.247 Sum_probs=522.2
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc--CC-------CCCCchhhHHHHHHHHHHH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP--LA-------PYSAPSVLAPLIVVIGATM 118 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~--~~-------~~~~~~~~~~l~~vl~i~~ 118 (928)
.++|+.+||.|.+..++.+.++ +.|++||.++++++++++++++++. +. ..+.+...+++++++++++
T Consensus 42 ~~~rl~~~G~N~l~~~~~~~~~---~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~ 118 (997)
T TIGR01106 42 AAEILARDGPNALTPPPTTPEW---VKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITG 118 (997)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHH
Confidence 4678899999999887766444 8899999999999999999997763 11 1134556677888999999
Q ss_pred hHHHHHHHHHhhhhHHHh---cceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCC
Q 002392 119 AKEGVEDWRRRKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLD 195 (928)
Q Consensus 119 ~~~~~~~~~r~~~~~~~n---~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~Lt 195 (928)
++.++++++++++++.++ +.+++|+| ||++++|++++|+|||+|.|++||+|||||+|+++++ +.||||+||
T Consensus 119 ~i~~~qe~ka~~~l~~l~~~~~~~~~ViR-dg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS~LT 193 (997)
T TIGR01106 119 CFSYYQEAKSSKIMESFKNMVPQQALVIR-DGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNSSLT 193 (997)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCeeEEEE-CCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEccccC
Confidence 999999999999988776 56899999 9999999999999999999999999999999999543 899999999
Q ss_pred CCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEe
Q 002392 196 GETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFT 275 (928)
Q Consensus 196 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~t 275 (928)
|||.|+.|.+++.. ..+++.+|++++||.+. .|++.|+|++|
T Consensus 194 GES~pv~K~~~~~~-------------------------------------~~~~~~~n~l~~Gt~v~-~G~~~~~V~~t 235 (997)
T TIGR01106 194 GESEPQTRSPEFTH-------------------------------------ENPLETRNIAFFSTNCV-EGTARGIVVNT 235 (997)
T ss_pred CCCCceeccCCCcc-------------------------------------cCccccCCeEEeccEee-eeeEEEEEEEc
Confidence 99999999875311 01223334444444433 23499999999
Q ss_pred cCccceeecCC---CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCC
Q 002392 276 GHDTKVMQNAT---DPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRR 352 (928)
Q Consensus 276 G~~Tki~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 352 (928)
|.+|++++... ..+.+++|+++.++++...+..+.++++++.++++.+... .|
T Consensus 236 G~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~--------------- 291 (997)
T TIGR01106 236 GDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGY---------TW--------------- 291 (997)
T ss_pred cccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------CH---------------
Confidence 99998765554 5566789999999999999888877777666555432210 12
Q ss_pred chhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccc
Q 002392 353 APLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLT 432 (928)
Q Consensus 353 ~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT 432 (928)
...+..++.+++.+||++|+++++++...++.+| +++++++|+++.+|+||++++||||||||||
T Consensus 292 -----~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m----------~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT 356 (997)
T TIGR01106 292 -----LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLT 356 (997)
T ss_pred -----HHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHH----------HHCCcEecCcHHHHHhcCCCEEEECCCCcee
Confidence 2255667788888999999999999999999988 8889999999999999999999999999999
Q ss_pred cceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCch
Q 002392 433 CNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHS 512 (928)
Q Consensus 433 ~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 512 (928)
+|+|+|.++++++..|..+... ...+..+ ....
T Consensus 357 ~n~m~v~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~------------~~~~ 389 (997)
T TIGR01106 357 QNRMTVAHMWFDNQIHEADTTE-----------------------------------DQSGVSF------------DKSS 389 (997)
T ss_pred cCceEEEEEEECCeEEecCCcc-----------------------------------CCCCccC------------Cccc
Confidence 9999999999888766431100 0000000 0112
Q ss_pred hHHHHHHHHHhhhcccccCCCCCC--CceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEe
Q 002392 513 DVIQKFFRVLAICHTAIPDVNEET--GEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELL 590 (928)
Q Consensus 513 ~~~~~~~~~l~lc~~~~~~~~~~~--~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 590 (928)
...+.++.++++||++....+... -...+..++|+|.||++++...+.... ..+..|+.+
T Consensus 390 ~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~------------------~~~~~~~~v 451 (997)
T TIGR01106 390 ATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVM------------------EMRERNPKV 451 (997)
T ss_pred HHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHH------------------HHHhhCcee
Confidence 344578889999998876432211 011244579999999999986543211 013567889
Q ss_pred EeecccCCcceeEEEEEcC---CCcEEEEEecCchhhHHHhccc---------chhhHHHHHHHHHHHHhcCCeeeEEEE
Q 002392 591 HVLEFTSSRKRMSVMVRNP---ENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAY 658 (928)
Q Consensus 591 ~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A~ 658 (928)
+.+||+|+||||++++... ++++++|+||||+.|+++|+.. +++.++.+.+.+++|+++|+|||++||
T Consensus 452 ~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~ 531 (997)
T TIGR01106 452 VEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCH 531 (997)
T ss_pred EEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEE
Confidence 9999999999999998643 3568999999999999999741 234567788889999999999999999
Q ss_pred EccCHHHHHH-HHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcH
Q 002392 659 RELGEDEYRI-WEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKM 737 (928)
Q Consensus 659 k~l~~~~~~~-~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~ 737 (928)
|.++.+++.. |.. +++ ..+.+|+||+|+|+++++||+|++++++|++|+++||+++|+|||+.
T Consensus 532 k~l~~~~~~~~~~~-----------~~~-----~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~ 595 (997)
T TIGR01106 532 LYLPDEQFPEGFQF-----------DTD-----DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHP 595 (997)
T ss_pred eecCcccccccccc-----------cch-----hhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCH
Confidence 9998765432 210 111 01345899999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhh
Q 002392 738 ETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLD 817 (928)
Q Consensus 738 ~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~ 817 (928)
.||.++|+++|++.++... . ..+. .++....... +.......+++|.+++
T Consensus 596 ~ta~~ia~~~gi~~~~~~~------~---~~i~-----------------~~~~~~~~~~----~~~~~~~~vi~G~~l~ 645 (997)
T TIGR01106 596 ITAKAIAKGVGIISEGNET------V---EDIA-----------------ARLNIPVSQV----NPRDAKACVVHGSDLK 645 (997)
T ss_pred HHHHHHHHHcCCCCCCccc------h---hhhh-----------------hhcccccccc----ccccccceEEEhHHhh
Confidence 9999999999998654321 0 0000 0000000000 0011224799999998
Q ss_pred HHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec--CCcchhhhhc
Q 002392 818 FALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMS 895 (928)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~--g~e~~~ak~a 895 (928)
.+.++++.+ +...+..+||||++|+||..+|+.+|+.|++|+|+|||.||++||++|||||||+ |+++ |+++
T Consensus 646 ~l~~~el~~----~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~v--ak~a 719 (997)
T TIGR01106 646 DMTSEQLDE----ILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQA 719 (997)
T ss_pred hCCHHHHHH----HHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHH--HHHh
Confidence 876655444 3334455799999999999999999999999999999999999999999999995 5676 8999
Q ss_pred CcEeecc--cccchhhhhhhchhhhhhccccccc
Q 002392 896 SDYAIAQ--FRFLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 896 AD~vi~~--f~~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
||++|++ |+.+.++ +.|||++|.|+++++.|
T Consensus 720 ADivL~dd~f~~Iv~a-i~~GR~i~~ni~k~i~~ 752 (997)
T TIGR01106 720 ADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAY 752 (997)
T ss_pred hceEEecCCHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9999998 7779999 99999999999999987
No 9
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-94 Score=800.77 Aligned_cols=654 Identities=23% Similarity=0.300 Sum_probs=521.0
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc-C----CCCCCchhhHHHH---HHHHHHHh
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-L----APYSAPSVLAPLI---VVIGATMA 119 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~-~----~~~~~~~~~~~l~---~vl~i~~~ 119 (928)
.+.|++-||.|.++..+...++ .++||.|++..-+++.+++++++.. + .+.+|+.....++ .+++++++
T Consensus 125 l~~Rr~~fG~N~~p~k~~K~Fl---~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~ 201 (1034)
T KOG0204|consen 125 LERRRKIFGSNTYPEKPPKGFL---RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAV 201 (1034)
T ss_pred HHHHHHhcCCCCCCCCCCccHH---HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeec
Confidence 4577888999999999876555 8899999999999999999999865 2 2335766654443 33445555
Q ss_pred HHHHHHHHHhhhhHHHhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCcc
Q 002392 120 KEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETN 199 (928)
Q Consensus 120 ~~~~~~~~r~~~~~~~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~ 199 (928)
.++-++.|-++.++...+.++.|+| ||+.++|+..||+||||+.|+-||.+||||+++++.+ +.||||+|||||+
T Consensus 202 nDy~qe~QF~~L~~~k~~~k~~ViR-~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTGESd 276 (1034)
T KOG0204|consen 202 NDYRQELQFRKLQKEKRNIKFQVIR-GGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTGESD 276 (1034)
T ss_pred chhHHhhhhhhhhhhhhceEEEEEE-CCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccCCCc
Confidence 5555555555556566688999999 9999999999999999999999999999999999665 9999999999999
Q ss_pred ceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCcc
Q 002392 200 LKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDT 279 (928)
Q Consensus 200 ~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~T 279 (928)
+++|.+ ..+.++++||.+++|. +.++|+.+|.+|
T Consensus 277 ~v~k~~-------------------------~~dPfLlSGTkv~eGs---------------------gkMlVTaVGmnt 310 (1034)
T KOG0204|consen 277 HVQKSL-------------------------DKDPFLLSGTKVMEGS---------------------GKMLVTAVGMNT 310 (1034)
T ss_pred ceeccC-------------------------CCCCeEeecceeecCc---------------------ceEEEEEeeecc
Confidence 999975 3455889999999998 999999999999
Q ss_pred c---eeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--cccCCCcccccccCCCCCCcccCCCCch
Q 002392 280 K---VMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETK--RDIDGGKIRRWYLQPDDATVFYDPRRAP 354 (928)
Q Consensus 280 k---i~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~--~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 354 (928)
. +|.........++|+|-++++++..+..+.++++.+.+++..+... ....+++ ..|- ......
T Consensus 311 ~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~-~~~~----------~~~~~~ 379 (1034)
T KOG0204|consen 311 QWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGG-TGTT----------WSDEYI 379 (1034)
T ss_pred hHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCC-CCcc----------ccHHHH
Confidence 6 4555555666889999999999999888877777766655433221 1111100 0010 011123
Q ss_pred hHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccc
Q 002392 355 LAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCN 434 (928)
Q Consensus 355 ~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n 434 (928)
..++..|..++.++++++|.+||+++++..++++.+|. +.+.++|.++++|++|..+.||+|||||||.|
T Consensus 380 ~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMm----------kD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N 449 (1034)
T KOG0204|consen 380 QEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMM----------KDNNLVRHLDACETMGSATAICSDKTGTLTTN 449 (1034)
T ss_pred HHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHh----------cchhHHHHhHHHhhcCCceEEEecCcCceEee
Confidence 45666777888889999999999999999999999884 44567999999999999999999999999999
Q ss_pred eeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhH
Q 002392 435 SMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDV 514 (928)
Q Consensus 435 ~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 514 (928)
.|++.+.++++..|...... . ..-.+..
T Consensus 450 ~MtVV~~~~~~~~~k~~~~~-~---------------------------------------------------~~l~~~~ 477 (1034)
T KOG0204|consen 450 RMTVVQSYIGSEHYKVNSPK-S---------------------------------------------------SNLPPSL 477 (1034)
T ss_pred eEEEEeeeeccccccccCcc-c---------------------------------------------------ccCCHHH
Confidence 99999999998877632110 0 0001122
Q ss_pred HHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeec
Q 002392 515 IQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLE 594 (928)
Q Consensus 515 ~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~ 594 (928)
...++.+++...+.....++..+....+.+||.|.||+.++..+|..+.. .+...++++++|
T Consensus 478 ~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~------------------~R~e~~v~kv~~ 539 (1034)
T KOG0204|consen 478 LDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD------------------VRPEEKVVKVYP 539 (1034)
T ss_pred HHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHh------------------hcchhheeEEec
Confidence 33455666655444333333333333446799999999999999987654 235677899999
Q ss_pred ccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhccc----------chhhHHHHHHHHHHHHhcCCeeeEEEEEccCHH
Q 002392 595 FTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH----------GQQFEAETRRHINRYAEAGLRTLVIAYRELGED 664 (928)
Q Consensus 595 F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~ 664 (928)
|+|+||||+++++.+++..++|+|||.|.++..|+.. +++.+..++..++.||.+||||+|+|||+....
T Consensus 540 FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~ 619 (1034)
T KOG0204|consen 540 FNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAG 619 (1034)
T ss_pred cCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccC
Confidence 9999999999999987773499999999999999864 334456888999999999999999999995432
Q ss_pred --HHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHH
Q 002392 665 --EYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAIN 742 (928)
Q Consensus 665 --~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ 742 (928)
+-.+|.. .+..+.+|+++|++||+||.|||++++|+.|+.|||+|.|+|||+..||.+
T Consensus 620 ~~~~~~~~~--------------------~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkA 679 (1034)
T KOG0204|consen 620 PDEEPSWDN--------------------EELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKA 679 (1034)
T ss_pred CCCCCCccc--------------------cccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHH
Confidence 1111210 135678999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHH
Q 002392 743 IGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK 822 (928)
Q Consensus 743 ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~ 822 (928)
||.+|||+.++.. .++++|.++..+.++
T Consensus 680 IA~eCGILt~~~d----------------------------------------------------~~~lEG~eFr~~s~e 707 (1034)
T KOG0204|consen 680 IARECGILTPGGD----------------------------------------------------FLALEGKEFRELSQE 707 (1034)
T ss_pred HHHHcccccCCCc----------------------------------------------------cceecchhhhhcCHH
Confidence 9999999987643 236777777776666
Q ss_pred HHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEe--cCCcchhhhhcCcEee
Q 002392 823 KLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVMSSDYAI 900 (928)
Q Consensus 823 ~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam--~g~e~~~ak~aAD~vi 900 (928)
+..+...++ .|.+|.+|.+|..+|+.++..|++|++.|||.||.|+|++||||.|| +|+|. ||++||+||
T Consensus 708 e~~~i~pkl------~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeV--AKEaSDIIi 779 (1034)
T KOG0204|consen 708 ERDKIWPKL------RVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEV--AKEASDIII 779 (1034)
T ss_pred HHHhhhhhh------eeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhh--hhhhCCeEE
Confidence 666666665 49999999999999999999999999999999999999999999988 68888 999999999
Q ss_pred cccc--cchhhhhhhchhhhhhccccccc
Q 002392 901 AQFR--FLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 901 ~~f~--~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
+|++ .+++. +.|||+.|.+|+|+++|
T Consensus 780 ~DDNFssIVk~-v~WGR~VY~nIqKFiQF 807 (1034)
T KOG0204|consen 780 LDDNFSSIVKA-VKWGRNVYDNIQKFLQF 807 (1034)
T ss_pred EcCchHHHHHH-HHhhhHHHHHHHHhhee
Confidence 9755 49999 99999999999999987
No 10
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=8.3e-93 Score=875.91 Aligned_cols=643 Identities=21% Similarity=0.279 Sum_probs=494.4
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc--CCC-------C-CCchhh---HHHHHHH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP--LAP-------Y-SAPSVL---APLIVVI 114 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~--~~~-------~-~~~~~~---~~l~~vl 114 (928)
.++|+.+||+|.+..++.+.++ +.+++||+++++++|+++++++++. ..+ . +|+..+ +++++++
T Consensus 66 v~~r~~~yG~N~l~~~~~~s~~---~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~ 142 (941)
T TIGR01517 66 LERREKVYGKNELPEKPPKSFL---QIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVV 142 (941)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHh
Confidence 4678889999999999876544 8899999999999999999999873 101 1 233222 2223333
Q ss_pred HHHHhHHHHHHHHHhhhhHHHhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccC
Q 002392 115 GATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNL 194 (928)
Q Consensus 115 ~i~~~~~~~~~~~r~~~~~~~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~L 194 (928)
+++++.++.+++..++.++..++.+++|+| ||++++|++++|+|||||.|++||.|||||+|++++ .+.||||+|
T Consensus 143 ~i~~~~e~~~~~~~~~l~~~~~~~~~~ViR-dG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~----~l~VdES~L 217 (941)
T TIGR01517 143 LVTAVNDYKKELQFRQLNREKSAQKIAVIR-GGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGL----SLEIDESSI 217 (941)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCceEEEE-CCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcC----cEEEEeccc
Confidence 444444544444444444334577999999 999999999999999999999999999999999932 599999999
Q ss_pred CCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEE
Q 002392 195 DGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVF 274 (928)
Q Consensus 195 tGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~ 274 (928)
||||.|+.|.+++. ...|+||.+.+|. +.++|++
T Consensus 218 TGES~pv~K~~~~~-------------------------n~v~~GT~v~~G~---------------------~~~iV~~ 251 (941)
T TIGR01517 218 TGESDPIKKGAPKD-------------------------SFLLSGTVVNEGS---------------------GRMLVTA 251 (941)
T ss_pred CCCCCcccccCCCC-------------------------ceEEeCCeEEeeE---------------------EEEEEEE
Confidence 99999999986432 1568888888887 9999999
Q ss_pred ecCccc---eeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCC
Q 002392 275 TGHDTK---VMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPR 351 (928)
Q Consensus 275 tG~~Tk---i~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 351 (928)
||.+|. +..+....+ +++|+++.++++..++..+.++++++.++++.+...... .|.. . ....
T Consensus 252 tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~------~~~~---~----~~~~ 317 (941)
T TIGR01517 252 VGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRI------IRGD---G----RDTE 317 (941)
T ss_pred eCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------cccc---c----cccc
Confidence 999995 444444444 457999999999999888777777666655432110000 0000 0 0000
Q ss_pred CchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCcc
Q 002392 352 RAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTL 431 (928)
Q Consensus 352 ~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTL 431 (928)
.....+...+..++.+++.+||++|+++++++...++.++ +++++++|+++.+|+||++++|||||||||
T Consensus 318 ~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~l~a~E~lg~v~~Ic~DKTGTL 387 (941)
T TIGR01517 318 EDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKM----------MKDNNLVRHLAACETMGSATAICSDKTGTL 387 (941)
T ss_pred hhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH----------HhCCCEEechHHhhhccCceEEEEcCcCce
Confidence 0112344578889999999999999999999999999888 899999999999999999999999999999
Q ss_pred ccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCc
Q 002392 432 TCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPH 511 (928)
Q Consensus 432 T~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 511 (928)
|+|+|++.+++..+..+.... +.. ..
T Consensus 388 T~n~m~v~~~~~~~~~~~~~~------------------------------------------------~~~------~~ 413 (941)
T TIGR01517 388 TQNVMSVVQGYIGEQRFNVRD------------------------------------------------VLR------NV 413 (941)
T ss_pred eeceEEEEEEEEecceEecCc------------------------------------------------ccc------cC
Confidence 999999999987654432110 000 00
Q ss_pred hhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeE
Q 002392 512 SDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLH 591 (928)
Q Consensus 512 ~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 591 (928)
++...+++...++||+..+...+.. ...+..++|+|.||++++++.|..... .+..|++++
T Consensus 414 ~~~~~~~l~~~~~~~s~~~~~~~~~-~~~~~~g~p~e~All~~~~~~~~~~~~------------------~~~~~~~~~ 474 (941)
T TIGR01517 414 PKHVRNILVEGISLNSSSEEVVDRG-GKRAFIGSKTECALLGFLLLLGRDYQE------------------VRAEEKVVK 474 (941)
T ss_pred CHHHHHHHHHHHHhCCCCccccCCC-CccccCCCccHHHHHHHHHHcCCCHHH------------------HHhhchhcc
Confidence 1123345555556655544321111 112446899999999999887743211 123567888
Q ss_pred eecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhccc----ch-----hhHHHHHHHHHHHHhcCCeeeEEEEEccC
Q 002392 592 VLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH----GQ-----QFEAETRRHINRYAEAGLRTLVIAYRELG 662 (928)
Q Consensus 592 ~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----~~-----~~~~~~~~~l~~~~~~Glr~l~~A~k~l~ 662 (928)
.+||+|+||||+++++.+++++++|+||||+.|+++|+.. +. +.++.+.+.+++|+.+|+|++++|||.++
T Consensus 475 ~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~ 554 (941)
T TIGR01517 475 IYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFA 554 (941)
T ss_pred ccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecC
Confidence 9999999999999999877889999999999999999752 10 13567788899999999999999999987
Q ss_pred HHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHH
Q 002392 663 EDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAIN 742 (928)
Q Consensus 663 ~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ 742 (928)
.+++..| +..|+||+|+|+++++|++|++++++|+.|+++||++||+|||+..||.+
T Consensus 555 ~~~~~~~-----------------------~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ 611 (941)
T TIGR01517 555 PEEFPRK-----------------------DYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKA 611 (941)
T ss_pred ccccccc-----------------------cccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHH
Confidence 6543222 23478999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHH
Q 002392 743 IGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK 822 (928)
Q Consensus 743 ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~ 822 (928)
+|++|||.+++. .+++|+++..+.++
T Consensus 612 iA~~~GI~~~~~------------------------------------------------------~vi~G~~~~~l~~~ 637 (941)
T TIGR01517 612 IARNCGILTFGG------------------------------------------------------LAMEGKEFRRLVYE 637 (941)
T ss_pred HHHHcCCCCCCc------------------------------------------------------eEeeHHHhhhCCHH
Confidence 999999975432 15666666555444
Q ss_pred HHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec--CCcchhhhhcCcEee
Q 002392 823 KLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDYAI 900 (928)
Q Consensus 823 ~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~--g~e~~~ak~aAD~vi 900 (928)
++.+.+. +..||||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||||+ |++. |+++||+++
T Consensus 638 el~~~i~------~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdv--Ak~aADivL 709 (941)
T TIGR01517 638 EMDPILP------KLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEV--AKEASDIIL 709 (941)
T ss_pred HHHHHhc------cCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHH--HHHhCCEEE
Confidence 4444332 23599999999999999999999999999999999999999999999995 5666 999999999
Q ss_pred c--ccccchhhhhhhchhhhhhccccccc
Q 002392 901 A--QFRFLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 901 ~--~f~~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
+ +|+.|.++ +.|||++|+|+++++.|
T Consensus 710 ~dd~f~~I~~~-i~~gR~~~~ni~k~i~~ 737 (941)
T TIGR01517 710 LDDNFASIVRA-VKWGRNVYDNIRKFLQF 737 (941)
T ss_pred ecCCHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9 47779999 79999999999999987
No 11
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=8.6e-92 Score=874.45 Aligned_cols=701 Identities=19% Similarity=0.234 Sum_probs=510.4
Q ss_pred cccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCchhhHHHHHHHHHHHhHHHHHHHHH
Q 002392 49 EVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRR 128 (928)
Q Consensus 49 ~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~r 128 (928)
++++..||.|.+..++.+++ +.|++||..|++++++++++++++. ++|.+.+.++++++++.+...++.++.
T Consensus 146 ~~r~~~yG~N~i~~~~~s~~----~ll~~~~~~p~~i~~i~~~~l~~~~----~~~~~~~~i~~i~~~~~~~~~~~~~k~ 217 (1054)
T TIGR01657 146 AQRKAKYGKNEIEIPVPSFL----ELLKEEVLHPFYVFQVFSVILWLLD----EYYYYSLCIVFMSSTSISLSVYQIRKQ 217 (1054)
T ss_pred HHHHHhcCCCeeecCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788899999999887666 8999999999998888887777763 556666777777888888888888888
Q ss_pred hhhhHHHh--cceeEEEccCCeEEEEeccccccCcEEEec--CCcccCceEEEEeeeCCCceEEEEeccCCCCccceeec
Q 002392 129 RKQDIEAN--NRKVKVYGQDHTFVETKWKNLRVGDLVKVH--KDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKR 204 (928)
Q Consensus 129 ~~~~~~~n--~~~~~v~r~~g~~~~i~~~~L~vGDII~l~--~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~ 204 (928)
.++.+++. ++.++|+| ||+|++|++++|+|||||.|+ +|+.|||||+||+ |.|.||||+|||||.|+.|.
T Consensus 218 ~~~L~~~~~~~~~v~V~R-dg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~-----g~~~VdES~LTGES~Pv~K~ 291 (1054)
T TIGR01657 218 MQRLRDMVHKPQSVIVIR-NGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS-----GSCIVNESMLTGESVPVLKF 291 (1054)
T ss_pred HHHHHHhhcCCeeEEEEE-CCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEe-----CcEEEecccccCCccceecc
Confidence 88877765 56899999 999999999999999999999 9999999999999 77999999999999999998
Q ss_pred cchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccce---
Q 002392 205 SLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV--- 281 (928)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki--- 281 (928)
+.+.... . ++. +.....++...+|+||.+++.... ..++.+.|+|++||.+|..
T Consensus 292 ~~~~~~~-~-~~~-------~~~~~~~~~~~lf~GT~v~~~~~~--------------~g~g~~~~vV~~TG~~T~~G~i 348 (1054)
T TIGR01657 292 PIPDNGD-D-DED-------LFLYETSKKHVLFGGTKILQIRPY--------------PGDTGCLAIVVRTGFSTSKGQL 348 (1054)
T ss_pred cCCcccc-c-ccc-------ccccccccceEEEcCCEEEEEecC--------------CCCCcEEEEEEeCCccccchHH
Confidence 8643100 0 000 001111233355666666531100 0135699999999999954
Q ss_pred eecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHHH
Q 002392 282 MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHF 361 (928)
Q Consensus 282 ~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 361 (928)
.+....++.+.+++++.+.+++.+++.+.++.+++.++ .++... . + +...+
T Consensus 349 ~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~-~~~~~~---~-----~--------------------~~~~~ 399 (1054)
T TIGR01657 349 VRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTII-ELIKDG---R-----P--------------------LGKII 399 (1054)
T ss_pred HHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcC---C-----c--------------------HHHHH
Confidence 44445556667889999888877665444333322221 111110 0 1 23378
Q ss_pred HHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEEE
Q 002392 362 LTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKC 441 (928)
Q Consensus 362 ~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i 441 (928)
++++.+++.++|++||++++++..++..+| ++++++|+++..+|.||+++++|||||||||+|+|.|.++
T Consensus 400 l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL----------~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v 469 (1054)
T TIGR01657 400 LRSLDIITIVVPPALPAELSIGINNSLARL----------KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGV 469 (1054)
T ss_pred HHHHHHHHhhcCchHHHHHHHHHHHHHHHH----------HHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeE
Confidence 889999999999999999999999999998 8899999999999999999999999999999999999998
Q ss_pred EEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHHH
Q 002392 442 SVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRV 521 (928)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 521 (928)
+..+....... ... .........+..+
T Consensus 470 ~~~~~~~~~~~-----------------------------------------------~~~------~~~~~~~~~~~~~ 496 (1054)
T TIGR01657 470 QGLSGNQEFLK-----------------------------------------------IVT------EDSSLKPSITHKA 496 (1054)
T ss_pred ecccCcccccc-----------------------------------------------ccc------cccccCchHHHHH
Confidence 75432100000 000 0000112256788
Q ss_pred HhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEe-ecCC---e--eEEEecCCCcccccceEEEEeEeecc
Q 002392 522 LAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFG-SSQT---S--ISLHELDPVSGQKVNRVYELLHVLEF 595 (928)
Q Consensus 522 l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~-~~~~---~--~~~~~~~~~~~~~~~~~~~il~~~~F 595 (928)
+++||++....+ ...++|.|.|+++++ |+.+.. .... . ..+.... ....+++++.+||
T Consensus 497 ~a~C~~~~~~~~-------~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~~~~i~~~~------~~~~~~il~~~pF 560 (1054)
T TIGR01657 497 LATCHSLTKLEG-------KLVGDPLDKKMFEAT---GWTLEEDDESAEPTSILAVVRTDD------PPQELSIIRRFQF 560 (1054)
T ss_pred HHhCCeeEEECC-------EEecCHHHHHHHHhC---CCEEECCCCcccccccccceeccC------CCceEEEEEEEee
Confidence 999999865321 134799999999975 454432 1100 0 0011000 1257999999999
Q ss_pred cCCcceeEEEEEcCC-CcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHH
Q 002392 596 TSSRKRMSVMVRNPE-NQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFL 674 (928)
Q Consensus 596 ~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~ 674 (928)
+|++|||||+++.++ +++++|+|||||.|+++|++. ..++++.+.++.|+.+|+|||++|||.+++.++.++..
T Consensus 561 ~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~--~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~--- 635 (1054)
T TIGR01657 561 SSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE--TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQD--- 635 (1054)
T ss_pred cCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc--CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhh---
Confidence 999999999999754 568899999999999999864 35678888999999999999999999998543322211
Q ss_pred HHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCc
Q 002392 675 KAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEM 754 (928)
Q Consensus 675 ~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~ 754 (928)
.+| +.+|+||+|+|+++|+|++|++++++|+.|+++||+++|+|||++.||.++|++|||+.++.
T Consensus 636 -------~~r--------~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~ 700 (1054)
T TIGR01657 636 -------LSR--------DAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSN 700 (1054)
T ss_pred -------ccH--------HHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCc
Confidence 123 56899999999999999999999999999999999999999999999999999999998765
Q ss_pred eEEEEcCCCch-----hhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHH
Q 002392 755 KQIVITLDSPD-----MEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFL 829 (928)
Q Consensus 755 ~~~~i~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~ 829 (928)
.++..+..... ...+.......... ............ .........+.++++|+.+..+... ..+.+.
T Consensus 701 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~itG~~l~~l~~~-~~~~l~ 773 (1054)
T TIGR01657 701 TLILAEAEPPESGKPNQIKFEVIDSIPFAS----TQVEIPYPLGQD--SVEDLLASRYHLAMSGKAFAVLQAH-SPELLL 773 (1054)
T ss_pred eEEEeecccccCCCCceEEEEecCcccccc----ccccccCccccc--chhhhcccceEEEEEcHHHHHHHHh-hHHHHH
Confidence 55443321100 00000000000000 000000000000 0000112345789999999876432 223444
Q ss_pred HhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc--cccch
Q 002392 830 DLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLE 907 (928)
Q Consensus 830 ~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~--f~~l~ 907 (928)
++...+ .||||++|+||..+|+.+|+.|++|+|+|||+||++||++|||||||+++| |..+|||++.+ |+.+.
T Consensus 774 ~~~~~~--~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~d---as~AA~f~l~~~~~~~I~ 848 (1054)
T TIGR01657 774 RLLSHT--TVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEAE---ASVAAPFTSKLASISCVP 848 (1054)
T ss_pred HHHhcC--eEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeecccc---ceeecccccCCCcHHHHH
Confidence 554444 499999999999999999999999999999999999999999999998775 56899999985 77799
Q ss_pred hhhhhhchhhhhhccccccc
Q 002392 908 RLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 908 ~lll~~Gr~~~~~i~~~i~y 927 (928)
++ +.+||.+|.++.+++.|
T Consensus 849 ~~-I~eGR~~l~~~~~~~~~ 867 (1054)
T TIGR01657 849 NV-IREGRCALVTSFQMFKY 867 (1054)
T ss_pred HH-HHHHHHHHHHHHHHHHH
Confidence 99 88999999998877665
No 12
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=1e-90 Score=853.78 Aligned_cols=670 Identities=24% Similarity=0.273 Sum_probs=503.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhccc-CCC-----CCCchhhHHHHHHHHHHHhHHHHHHHHHhhhhHHHh---cceeEEEcc
Q 002392 75 LFEQFRRVANIYFLVVAFVSFSP-LAP-----YSAPSVLAPLIVVIGATMAKEGVEDWRRRKQDIEAN---NRKVKVYGQ 145 (928)
Q Consensus 75 l~~qf~~~~n~~~l~~~il~~~~-~~~-----~~~~~~~~~l~~vl~i~~~~~~~~~~~r~~~~~~~n---~~~~~v~r~ 145 (928)
+++||+++++++++++++++++. +.+ .+.|...+.++++++++++...+++++.+++.+.+. +.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViR- 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLR- 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEE-
Confidence 46899999999999999999985 221 123445566677788888889999999998866664 67899999
Q ss_pred CCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeeccchhhccCCChhhhccceEEE
Q 002392 146 DHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVI 225 (928)
Q Consensus 146 ~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i 225 (928)
||++++|++++|+|||||.|++||.|||||+|+++++ +.||||+|||||.|+.|.++.....
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~~~~-------------- 141 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESVPDE-------------- 141 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCcccccccccCcc--------------
Confidence 9999999999999999999999999999999999554 9999999999999999987532100
Q ss_pred EeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccceee---cCCCCCCcccHHHHHHHHH
Q 002392 226 KCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ---NATDPPSKRSKIERKMDKI 302 (928)
Q Consensus 226 ~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~~---~~~~~~~k~s~~~~~~~~~ 302 (928)
...+.+.+|++++||.+.+ |++.|+|++||.+|++++ +...++.+++|++++++++
T Consensus 142 --------------------~~~~~~~~n~l~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~ 200 (917)
T TIGR01116 142 --------------------RAVNQDKKNMLFSGTLVVA-GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEF 200 (917)
T ss_pred --------------------ccCcccccceeeeCCEEec-ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHH
Confidence 0012233455555555553 459999999999997754 5666778899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHH
Q 002392 303 VYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEI 382 (928)
Q Consensus 303 ~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~ 382 (928)
+..++.+.++++++.++++..+.... .. ...| ...++..+..++++++.+||++|++++++
T Consensus 201 ~~~l~~~~~~~~~i~~~~~~~~~~~~-~~--~~~~----------------~~~~~~~~~~~i~l~v~~iP~~Lp~~vti 261 (917)
T TIGR01116 201 GELLSKVIGLICILVWVINIGHFNDP-AL--GGGW----------------IQGAIYYFKIAVALAVAAIPEGLPAVITT 261 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccc-cc--cchh----------------HHHHHHHHHHHHhhhhhccccccHHHHHH
Confidence 99988877777776655432211000 00 0012 12234456677889999999999999999
Q ss_pred HHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHh
Q 002392 383 VKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKR 462 (928)
Q Consensus 383 ~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~ 462 (928)
+..+++.+| +++++++|+++.+|+||++++||||||||||+|+|++.+++..+..+.... .
T Consensus 262 ~l~~~~~~m----------~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~---------~ 322 (917)
T TIGR01116 262 CLALGTRKM----------AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLN---------E 322 (917)
T ss_pred HHHHHHHHH----------HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccc---------e
Confidence 999999999 788999999999999999999999999999999999999987654321000 0
Q ss_pred hCCcccccCCCCCCCCCCCCcccccCCccCCccccc--hhhhcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCceE
Q 002392 463 KGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRD--ERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEIS 540 (928)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~ 540 (928)
.. . .+..+.. ..+.+.........+....++.++++||++....++..+.++
T Consensus 323 ~~--~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~ 376 (917)
T TIGR01116 323 FC--V------------------------TGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYE 376 (917)
T ss_pred EE--e------------------------cCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCcee
Confidence 00 0 0000000 000000000011234566789999999998765433222222
Q ss_pred eecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecC
Q 002392 541 YEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGA 620 (928)
Q Consensus 541 ~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa 620 (928)
. .++|+|.||++++.+.|+....+....+.....+.. ......|++++.+||+|+||||||+++. ++++++|+|||
T Consensus 377 ~-~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGA 452 (917)
T TIGR01116 377 K-VGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCN--SVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGA 452 (917)
T ss_pred e-ccChhHHHHHHHHHHcCCCchhcccccccccccchh--HHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCC
Confidence 2 379999999999999998766544333322211100 0113568899999999999999999997 46789999999
Q ss_pred chhhHHHhccc----------chhhHHHHHHHHHHHHh-cCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHH
Q 002392 621 DSVMFERLSKH----------GQQFEAETRRHINRYAE-AGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVA 689 (928)
Q Consensus 621 ~~~i~~~~~~~----------~~~~~~~~~~~l~~~~~-~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~ 689 (928)
|+.|+++|+.. +++.++.+.+++++|+. +|+|||++|||.++.++.. +. . .+.
T Consensus 453 pe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~-~~---------~-~~~----- 516 (917)
T TIGR01116 453 PEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREE-DL---------L-SDP----- 516 (917)
T ss_pred hHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccc-cc---------c-ccc-----
Confidence 99999999741 23456678888999999 9999999999998764321 00 0 010
Q ss_pred HHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHh
Q 002392 690 SAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEAL 769 (928)
Q Consensus 690 ~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~ 769 (928)
...+.+|+||+|+|+++++||+|++++++|+.|+++||++||+|||+..||.++|+++|+..++..+.
T Consensus 517 ~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~------------ 584 (917)
T TIGR01116 517 ANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVT------------ 584 (917)
T ss_pred hhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcccc------------
Confidence 12356899999999999999999999999999999999999999999999999999999976442211
Q ss_pred hhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHH
Q 002392 770 EKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKA 849 (928)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~ 849 (928)
...++|..+..+.++++... .++..||||++|+||.
T Consensus 585 --------------------------------------~~~~~g~~l~~~~~~~~~~~------~~~~~v~ar~~P~~K~ 620 (917)
T TIGR01116 585 --------------------------------------FKSFTGREFDEMGPAKQRAA------CRSAVLFSRVEPSHKS 620 (917)
T ss_pred --------------------------------------ceeeeHHHHhhCCHHHHHHh------hhcCeEEEecCHHHHH
Confidence 12345555444333222221 2345699999999999
Q ss_pred HHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec-CCcchhhhhcCcEeecc--cccchhhhhhhchhhhhhcccccc
Q 002392 850 LVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMVK 926 (928)
Q Consensus 850 ~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~-g~e~~~ak~aAD~vi~~--f~~l~~lll~~Gr~~~~~i~~~i~ 926 (928)
++|+.++..|++|+|+|||.||++||++|||||||+ |++. |+++||+++.+ |+.+.++ +.|||++|+|+++++.
T Consensus 621 ~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~--ak~aAD~vl~dd~f~~i~~~-i~~GR~~~~ni~k~i~ 697 (917)
T TIGR01116 621 ELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEV--AKEASDMVLADDNFATIVAA-VEEGRAIYNNMKQFIR 697 (917)
T ss_pred HHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCCcHH--HHHhcCeEEccCCHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 999999889999999999999999999999999994 4455 89999999998 8889999 8999999999999998
Q ss_pred c
Q 002392 927 L 927 (928)
Q Consensus 927 y 927 (928)
|
T Consensus 698 ~ 698 (917)
T TIGR01116 698 Y 698 (917)
T ss_pred H
Confidence 7
No 13
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=9.9e-89 Score=827.65 Aligned_cols=609 Identities=20% Similarity=0.277 Sum_probs=488.0
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCchhhHHHHHHHHHHHhHHHHHHHH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWR 127 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~ 127 (928)
.++|+.+||.|.++.++.+.++ +.|++||.+|++++++++++++++. +.+...+.++++++++.+.+++++++
T Consensus 73 a~~r~~~~G~N~l~~~~~~s~~---~~~~~~~~~p~~~lL~~aa~ls~~~----~~~~~a~~I~~iv~i~~~i~~~qe~r 145 (902)
T PRK10517 73 VESAREQHGENELPAQKPLPWW---VHLWVCYRNPFNILLTILGAISYAT----EDLFAAGVIALMVAISTLLNFIQEAR 145 (902)
T ss_pred HHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHH----ccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578899999999999887554 8999999999999999999999885 56667777888888999999999999
Q ss_pred HhhhhHHH---hcceeEEEccC------CeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCc
Q 002392 128 RRKQDIEA---NNRKVKVYGQD------HTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGET 198 (928)
Q Consensus 128 r~~~~~~~---n~~~~~v~r~~------g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs 198 (928)
..++.+.+ .+.+++|+| | |++++|++++|+|||||.|++||.|||||+|+++++ +.||||+|||||
T Consensus 146 a~~~~~~L~~l~~~~a~ViR-~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTGES 220 (902)
T PRK10517 146 STKAADALKAMVSNTATVLR-VINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTGES 220 (902)
T ss_pred HHHHHHHHHhhCCCeEEEEE-CCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCCCC
Confidence 98775444 578899999 7 789999999999999999999999999999999433 899999999999
Q ss_pred cceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCc
Q 002392 199 NLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHD 278 (928)
Q Consensus 199 ~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~ 278 (928)
.|+.|.+++.... . .+.-+.+...|+||.+++|. +.++|+.||.+
T Consensus 221 ~PV~K~~~~~~~~---~-----------~~~~~~~n~vfaGT~V~~G~---------------------~~~vV~atG~~ 265 (902)
T PRK10517 221 LPVEKFATTRQPE---H-----------SNPLECDTLCFMGTNVVSGT---------------------AQAVVIATGAN 265 (902)
T ss_pred Cceeccccccccc---c-----------cCccccccceeeCceEeeee---------------------EEEEEEEeccc
Confidence 9999998653210 0 00011223557777777777 99999999999
Q ss_pred cce---eecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchh
Q 002392 279 TKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPL 355 (928)
Q Consensus 279 Tki---~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 355 (928)
|.+ ......+..+++|+++.+++++.++..+.++++.+.++++.+... +|
T Consensus 266 T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~---------~~------------------ 318 (902)
T PRK10517 266 TWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKG---------DW------------------ 318 (902)
T ss_pred cHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcC---------CH------------------
Confidence 965 444455667789999999999998887777777666554432110 12
Q ss_pred HHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccce
Q 002392 356 AAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNS 435 (928)
Q Consensus 356 ~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~ 435 (928)
...+..++++++.+||++||++++++...++.+| +++++++|+++.+|+||++++||||||||||+|+
T Consensus 319 --~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~m----------ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~ 386 (902)
T PRK10517 319 --WEAALFALSVAVGLTPEMLPMIVTSTLARGAVKL----------SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDK 386 (902)
T ss_pred --HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH----------HhCCcEEecchhhhhccCCCEEEecCCCccccce
Confidence 2367788999999999999999999999999888 8999999999999999999999999999999999
Q ss_pred eEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHH
Q 002392 436 MEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVI 515 (928)
Q Consensus 436 m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 515 (928)
|++.++... .+. . .
T Consensus 387 m~V~~~~~~---~~~------------------------------------------------------------~---~ 400 (902)
T PRK10517 387 IVLENHTDI---SGK------------------------------------------------------------T---S 400 (902)
T ss_pred EEEEEEecC---CCC------------------------------------------------------------C---H
Confidence 999875310 000 0 0
Q ss_pred HHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecc
Q 002392 516 QKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEF 595 (928)
Q Consensus 516 ~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F 595 (928)
.+++...++|.... . ..+||.|.|++.++...+.. .....|+.+..+||
T Consensus 401 ~~ll~~a~l~~~~~----~-------~~~~p~d~All~~a~~~~~~--------------------~~~~~~~~~~~~pF 449 (902)
T PRK10517 401 ERVLHSAWLNSHYQ----T-------GLKNLLDTAVLEGVDEESAR--------------------SLASRWQKIDEIPF 449 (902)
T ss_pred HHHHHHHHhcCCcC----C-------CCCCHHHHHHHHHHHhcchh--------------------hhhhcCceEEEeee
Confidence 13444444443221 0 13699999999998653210 01245777889999
Q ss_pred cCCcceeEEEEEcCCCcEEEEEecCchhhHHHhccc---------chhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHH
Q 002392 596 TSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEY 666 (928)
Q Consensus 596 ~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~ 666 (928)
+|+||||+++++.+++...+++|||++.|+++|+.. +++.++.+.+..+.++.+|+|++++|||.++.++.
T Consensus 450 ds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~ 529 (902)
T PRK10517 450 DFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREG 529 (902)
T ss_pred CCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCcccc
Confidence 999999999998877788999999999999999752 22345667777889999999999999998865321
Q ss_pred HHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHH
Q 002392 667 RIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA 746 (928)
Q Consensus 667 ~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~ 746 (928)
.+ + ...|+|++|+|+++|+||+|++++++|++|+++||+|+|+|||+..||.++|++
T Consensus 530 -~~-------------~---------~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~ 586 (902)
T PRK10517 530 -DY-------------Q---------RADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHE 586 (902)
T ss_pred -cc-------------c---------cccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 00 0 113689999999999999999999999999999999999999999999999999
Q ss_pred cCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHH
Q 002392 747 CSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEK 826 (928)
Q Consensus 747 ~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~ 826 (928)
+||..+. +++|..++.+.++++.+
T Consensus 587 lGI~~~~--------------------------------------------------------v~~G~el~~l~~~el~~ 610 (902)
T PRK10517 587 VGLDAGE--------------------------------------------------------VLIGSDIETLSDDELAN 610 (902)
T ss_pred cCCCccC--------------------------------------------------------ceeHHHHHhCCHHHHHH
Confidence 9994210 44555555444444443
Q ss_pred HHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec-CCcchhhhhcCcEeecc--c
Q 002392 827 MFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--F 903 (928)
Q Consensus 827 ~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~-g~e~~~ak~aAD~vi~~--f 903 (928)
...+ ..+|+|++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||||+ |++. |+++||+|+++ |
T Consensus 611 ~~~~------~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdv--AkeaADiVLldd~~ 682 (902)
T PRK10517 611 LAER------TTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDI--AREAADIILLEKSL 682 (902)
T ss_pred HHhh------CcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHH--HHHhCCEEEecCCh
Confidence 3332 2499999999999999999999999999999999999999999999995 4455 99999999997 5
Q ss_pred ccchhhhhhhchhhhhhccccccc
Q 002392 904 RFLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 904 ~~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
..+..+ +.+||..|+|+++++.|
T Consensus 683 ~~I~~a-i~~gR~i~~nI~k~i~~ 705 (902)
T PRK10517 683 MVLEEG-VIEGRRTFANMLKYIKM 705 (902)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHH
Confidence 559988 99999999999999876
No 14
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1.9e-87 Score=823.43 Aligned_cols=635 Identities=21% Similarity=0.252 Sum_probs=496.5
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHH-HHHHHHHHHHHHHHhcccCCCCCCchhhHHHHHHHHHHHhHHHHHHH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQF-RRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDW 126 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf-~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~ 126 (928)
.++|+++||.|.+..++.+.++ +.+++|| .+|++++++++++++++. +.|...+.+++++++..+..+++++
T Consensus 30 v~~r~~~~G~N~i~~~~~~s~~---~~~l~~~~~~~~~~~L~~aa~ls~~~----g~~~~~~~i~~~i~~~~~i~~~qe~ 102 (884)
T TIGR01522 30 ASHRRAFHGWNEFDVEEDESLW---KKFLSQFVKNPLILLLIASAVISVFM----GNIDDAVSITLAILIVVTVGFVQEY 102 (884)
T ss_pred HHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhChHHHHHHHHHHHHHHH----cchhhHHHHHhHHHHHHHHHHHHHH
Confidence 4578899999999988755443 8899999 899999999999999875 4455555566666677778899999
Q ss_pred HHhhhhHHHh---cceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceee
Q 002392 127 RRRKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLK 203 (928)
Q Consensus 127 ~r~~~~~~~n---~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K 203 (928)
+.+++.+.+. +.+++|+| ||++++|+++||+|||||.|++||.|||||+|+++++ +.||||+|||||.|+.|
T Consensus 103 ~a~~~l~~L~~l~~~~~~ViR-dg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv~K 177 (884)
T TIGR01522 103 RSEKSLEALNKLVPPECHLIR-EGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPVSK 177 (884)
T ss_pred HHHHHHHHHhccCCCeeEEEE-CCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCcceec
Confidence 9988876664 77899999 9999999999999999999999999999999999443 89999999999999999
Q ss_pred ccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCcccee-
Q 002392 204 RSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVM- 282 (928)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~- 282 (928)
.+++..... ..+........|+||.+.+|. +.++|++||.+|.++
T Consensus 178 ~~~~~~~~~-------------~~~~~~~~n~v~~GT~v~~G~---------------------~~~~V~~tG~~T~~gk 223 (884)
T TIGR01522 178 VTAPIPAAT-------------NGDLAERSNIAFMGTLVRCGH---------------------GKGIVVGTGSNTEFGA 223 (884)
T ss_pred ccccccccc-------------cccccccCceEEeCCEEEeee---------------------EEEEEEEecCccHHHH
Confidence 986532100 011123334678888888887 999999999999654
Q ss_pred --ecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHH
Q 002392 283 --QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360 (928)
Q Consensus 283 --~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 360 (928)
.........++|+++.+++++.++.++.++++++.+++..+ .. . +| ...
T Consensus 224 i~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~-~-------~~--------------------~~~ 274 (884)
T TIGR01522 224 VFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWF-QG-K-------DW--------------------LEM 274 (884)
T ss_pred HHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc-C-------CH--------------------HHH
Confidence 34455566689999999999998877665554444333211 10 0 12 236
Q ss_pred HHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEE
Q 002392 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVK 440 (928)
Q Consensus 361 ~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~ 440 (928)
+..++.+++.+||++|+++++++...++.++ +++++++|+++.+|+||++++||||||||||+|+|++.+
T Consensus 275 ~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~----------ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~ 344 (884)
T TIGR01522 275 FTISVSLAVAAIPEGLPIIVTVTLALGVLRM----------SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTK 344 (884)
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------hhcCCcccchHHHHhccCccEEEecCccccccCeEEEEE
Confidence 7778899999999999999999999999988 899999999999999999999999999999999999999
Q ss_pred EEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHH
Q 002392 441 CSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFR 520 (928)
Q Consensus 441 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 520 (928)
++..+..+..... ...+ ....+..++. ......++.+.+++.
T Consensus 345 i~~~~~~~~~~~~-----------~~~~---------------------~~~~~~~~~~------~~~~~~~~~~~~~l~ 386 (884)
T TIGR01522 345 IWTSDGLHTMLNA-----------VSLN---------------------QFGEVIVDGD------VLHGFYTVAVSRILE 386 (884)
T ss_pred EEecCceEeeccC-----------CccC---------------------CCCccccccc------ccccccCHHHHHHHH
Confidence 9876543210000 0000 0000000000 000112235667888
Q ss_pred HHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcc
Q 002392 521 VLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRK 600 (928)
Q Consensus 521 ~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk 600 (928)
+.++||++.....+ + ...++|.|.||+++++..|+... ...|+.++.+||+|+||
T Consensus 387 ~~~l~~~~~~~~~~--~---~~~g~p~e~All~~~~~~~~~~~--------------------~~~~~~~~~~pF~s~~k 441 (884)
T TIGR01522 387 AGNLCNNAKFRNEA--D---TLLGNPTDVALIELLMKFGLDDL--------------------RETYIRVAEVPFSSERK 441 (884)
T ss_pred HHhhhCCCeecCCC--C---CcCCChHHHHHHHHHHHcCcHhH--------------------HhhCcEEeEeCCCCCCC
Confidence 99999988654321 1 11368999999999998775311 23577889999999999
Q ss_pred eeEEEEEcC-CCcEEEEEecCchhhHHHhccc----------chhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHH
Q 002392 601 RMSVMVRNP-ENQLLLLCKGADSVMFERLSKH----------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIW 669 (928)
Q Consensus 601 rmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~ 669 (928)
||+++++.+ ++++++|+|||||.|+.+|+.. +++.++.+.+.++.++.+|+|++++|||.++
T Consensus 442 ~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~------- 514 (884)
T TIGR01522 442 WMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEK------- 514 (884)
T ss_pred eEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCC-------
Confidence 999999874 5678999999999999999742 1234566778889999999999999998652
Q ss_pred HHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 670 EKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 670 ~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
.+|+|+|+++++|++|++++++|+.|+++||+++|+|||+..||.++|+++||
T Consensus 515 ---------------------------~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi 567 (884)
T TIGR01522 515 ---------------------------GQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGM 567 (884)
T ss_pred ---------------------------CCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 57999999999999999999999999999999999999999999999999999
Q ss_pred cccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHH
Q 002392 750 LRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFL 829 (928)
Q Consensus 750 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~ 829 (928)
...... +++|+.++.+.++++.+.+.
T Consensus 568 ~~~~~~------------------------------------------------------~v~g~~l~~~~~~~l~~~~~ 593 (884)
T TIGR01522 568 PSKTSQ------------------------------------------------------SVSGEKLDAMDDQQLSQIVP 593 (884)
T ss_pred CCCCCc------------------------------------------------------eeEhHHhHhCCHHHHHHHhh
Confidence 754321 34455554443333333322
Q ss_pred HhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec--CCcchhhhhcCcEeecc--ccc
Q 002392 830 DLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDYAIAQ--FRF 905 (928)
Q Consensus 830 ~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~--g~e~~~ak~aAD~vi~~--f~~ 905 (928)
+..||||++|+||..+|+.+++.|+.|+|+|||.||++||++|||||+|+ |++. |+++||+++++ |..
T Consensus 594 ------~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~v--a~~aaDivl~dd~~~~ 665 (884)
T TIGR01522 594 ------KVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDV--AKEAADMILTDDDFAT 665 (884)
T ss_pred ------cCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHH--HHHhcCEEEcCCCHHH
Confidence 33599999999999999999999999999999999999999999999995 3444 88999999986 777
Q ss_pred chhhhhhhchhhhhhccccccc
Q 002392 906 LERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 906 l~~lll~~Gr~~~~~i~~~i~y 927 (928)
+.++ +.+||.+|+|+++++.|
T Consensus 666 i~~~-i~~gR~~~~ni~k~i~~ 686 (884)
T TIGR01522 666 ILSA-IEEGKGIFNNIKNFITF 686 (884)
T ss_pred HHHH-HHHHHHHHHHHHHHHHH
Confidence 9999 99999999999999887
No 15
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=1.1e-87 Score=820.08 Aligned_cols=624 Identities=21% Similarity=0.256 Sum_probs=482.9
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc--CCC-----CCCchhhHHHHHHHHHHHhH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP--LAP-----YSAPSVLAPLIVVIGATMAK 120 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~--~~~-----~~~~~~~~~l~~vl~i~~~~ 120 (928)
.++|+.+||+|.+..++.+.++ +.+++||++|++++++++++++++. +.+ .+.|...+.++++++++.+.
T Consensus 51 a~~rl~~~G~N~l~~~~~~~~~---~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~i 127 (903)
T PRK15122 51 AAERLQRYGPNEVAHEKPPHAL---VQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLL 127 (903)
T ss_pred HHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHHHH
Confidence 4578999999999988865443 7899999999999999999999875 111 12345666677888888899
Q ss_pred HHHHHHHHhhhhHHH---hcceeEEEccC------CeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEe
Q 002392 121 EGVEDWRRRKQDIEA---NNRKVKVYGQD------HTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVET 191 (928)
Q Consensus 121 ~~~~~~~r~~~~~~~---n~~~~~v~r~~------g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~ 191 (928)
+++++++..++.+.+ .+.+++|+| | |+++.|++++|+|||||.|++||.|||||+|+++++ +.|||
T Consensus 128 ~~~qe~~a~~a~~~L~~l~~~~~~V~R-dg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~----l~VDE 202 (903)
T PRK15122 128 RFWQEFRSNKAAEALKAMVRTTATVLR-RGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD----LFISQ 202 (903)
T ss_pred HHHHHHHHHHHHHHHHhccCCceEEEE-CCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEc
Confidence 999999998875555 478899999 7 589999999999999999999999999999999443 79999
Q ss_pred ccCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEE
Q 002392 192 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGV 271 (928)
Q Consensus 192 s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gv 271 (928)
|+|||||.|+.|.+............ ..+. ..+..+.....|+||.+++|. +.++
T Consensus 203 S~LTGES~PV~K~~~~~~~~~~~~~~---~~~~-~~~~~~~~n~vfaGT~V~~G~---------------------~~~~ 257 (903)
T PRK15122 203 AVLTGEALPVEKYDTLGAVAGKSADA---LADD-EGSLLDLPNICFMGTNVVSGT---------------------ATAV 257 (903)
T ss_pred cccCCCCcceeeeccccccccccccc---cccc-cCCcccccceEEeCCEEEeee---------------------EEEE
Confidence 99999999999986211000000000 0000 000011223567888887777 9999
Q ss_pred EEEecCccceeec---CCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCccc
Q 002392 272 VVFTGHDTKVMQN---ATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFY 348 (928)
Q Consensus 272 Vv~tG~~Tki~~~---~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 348 (928)
|++||.+|.+.+. ... +...+++++.++++..++..+.++++.+.+++..+... +|
T Consensus 258 V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~---------~~----------- 316 (903)
T PRK15122 258 VVATGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKG---------DW----------- 316 (903)
T ss_pred EEEeccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC---------CH-----------
Confidence 9999999975333 333 44568999999999888776666655544433322110 12
Q ss_pred CCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCC
Q 002392 349 DPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKT 428 (928)
Q Consensus 349 ~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKT 428 (928)
...+..++.+++.+||++||++++++...++.+| +++++++|++..+|+||++++||||||
T Consensus 317 ---------~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m----------ak~~ilVk~l~avE~Lg~v~vIc~DKT 377 (903)
T PRK15122 317 ---------LEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM----------ARRKVVVKRLNAIQNFGAMDVLCTDKT 377 (903)
T ss_pred ---------HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------HHcCCeecccchhhhhcCCcEEEecCC
Confidence 2367778999999999999999999999999888 889999999999999999999999999
Q ss_pred CccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCC
Q 002392 429 GTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVN 508 (928)
Q Consensus 429 GTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 508 (928)
||||+|+|++.+++.....
T Consensus 378 GTLT~~~m~V~~~~~~~~~------------------------------------------------------------- 396 (903)
T PRK15122 378 GTLTQDRIILEHHLDVSGR------------------------------------------------------------- 396 (903)
T ss_pred cccccCeEEEEEEEcCCCC-------------------------------------------------------------
Confidence 9999999999986521100
Q ss_pred CCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEE
Q 002392 509 EPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYE 588 (928)
Q Consensus 509 ~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (928)
.. .+++...++|. ... . ..+||.|.|+++++.+.|.... ...|+
T Consensus 397 --~~---~~~l~~a~l~s-~~~--~--------~~~~p~e~All~~a~~~~~~~~--------------------~~~~~ 440 (903)
T PRK15122 397 --KD---ERVLQLAWLNS-FHQ--S--------GMKNLMDQAVVAFAEGNPEIVK--------------------PAGYR 440 (903)
T ss_pred --Ch---HHHHHHHHHhC-CCC--C--------CCCChHHHHHHHHHHHcCchhh--------------------hhcCc
Confidence 00 02333333331 110 0 1369999999999988664210 13567
Q ss_pred EeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhccc---------chhhHHHHHHHHHHHHhcCCeeeEEEEE
Q 002392 589 LLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAYR 659 (928)
Q Consensus 589 il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A~k 659 (928)
.+..+||++.||+|+++++..+|++++++||||+.|+++|+.. +++.++.+.+.++.++.+|+|++++|||
T Consensus 441 ~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k 520 (903)
T PRK15122 441 KVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATR 520 (903)
T ss_pred eEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEe
Confidence 7888999999999999999877889999999999999999742 2233556777889999999999999999
Q ss_pred ccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhh
Q 002392 660 ELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (928)
Q Consensus 660 ~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~t 739 (928)
.++.++...+ ..+..|+|++|+|+++++||+|++++++|+.|+++||+|+|+|||+..|
T Consensus 521 ~~~~~~~~~~---------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~t 579 (903)
T PRK15122 521 EIPGGESRAQ---------------------YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIV 579 (903)
T ss_pred ccCccccccc---------------------cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 9876432110 0123578999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHH
Q 002392 740 AINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFA 819 (928)
Q Consensus 740 a~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~ 819 (928)
|.++|+++||.... +++|..++.+
T Consensus 580 A~aIA~~lGI~~~~--------------------------------------------------------vi~G~el~~~ 603 (903)
T PRK15122 580 TAKICREVGLEPGE--------------------------------------------------------PLLGTEIEAM 603 (903)
T ss_pred HHHHHHHcCCCCCC--------------------------------------------------------ccchHhhhhC
Confidence 99999999994210 4556555555
Q ss_pred hHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec-CCcchhhhhcCcE
Q 002392 820 LDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDY 898 (928)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~-g~e~~~ak~aAD~ 898 (928)
.++++.+...+ ..+|||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||||+ |++. |+++||+
T Consensus 604 ~~~el~~~v~~------~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdv--AkeaADi 675 (903)
T PRK15122 604 DDAALAREVEE------RTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADI--AKESADI 675 (903)
T ss_pred CHHHHHHHhhh------CCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeCcccHH--HHHhcCE
Confidence 44444443332 2499999999999999999999999999999999999999999999995 5666 9999999
Q ss_pred eecc--cccchhhhhhhchhhhhhccccccc
Q 002392 899 AIAQ--FRFLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 899 vi~~--f~~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
|+++ |..+..+ +.+||..|+|+++++.|
T Consensus 676 VLldd~f~~Iv~a-i~~gR~i~~nI~k~i~~ 705 (903)
T PRK15122 676 ILLEKSLMVLEEG-VIKGRETFGNIIKYLNM 705 (903)
T ss_pred EEecCChHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9996 5569999 99999999999998876
No 16
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=2.3e-87 Score=817.04 Aligned_cols=609 Identities=20% Similarity=0.256 Sum_probs=484.2
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCchhhHHHHHHHHHHHhHHHHHHHH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWR 127 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~ 127 (928)
.++|+++||.|.+..++.+.++ +.+++||..|++++++++++++++. +.+...+.++++++++.+...+++++
T Consensus 39 v~~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~p~~~iL~~~a~ls~~~----~~~~~~~iI~~iv~~~~~i~~~~e~~ 111 (867)
T TIGR01524 39 VTERLAEFGPNQTVEEKKVPNL---RLLIRAFNNPFIYILAMLMGVSYLT----DDLEATVIIALMVLASGLLGFIQESR 111 (867)
T ss_pred HHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhHHHHHHHHHHHHHHHH----hhHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 4678899999999998865443 8999999999999999999999885 56667777788888888999999998
Q ss_pred HhhhhHHH---hcceeEEEcc-----CCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCcc
Q 002392 128 RRKQDIEA---NNRKVKVYGQ-----DHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETN 199 (928)
Q Consensus 128 r~~~~~~~---n~~~~~v~r~-----~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~ 199 (928)
.+++...+ .+.+++|+|. ||++++|++++|+|||||.|++||+|||||+|+++++ +.||||+|||||.
T Consensus 112 a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTGES~ 187 (867)
T TIGR01524 112 AERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTGESL 187 (867)
T ss_pred HHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccCCCC
Confidence 87775444 5788999983 7999999999999999999999999999999999443 7999999999999
Q ss_pred ceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCcc
Q 002392 200 LKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDT 279 (928)
Q Consensus 200 ~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~T 279 (928)
|+.|.+++.... .. +..+.....|+||.+.+|. +.++|++||.+|
T Consensus 188 PV~K~~~~~~~~---~~-----------~~~~~~n~vfaGT~v~~G~---------------------~~~~V~~tG~~T 232 (867)
T TIGR01524 188 PVEKFVEDKRAR---DP-----------EILERENLCFMGTNVLSGH---------------------AQAVVLATGSST 232 (867)
T ss_pred cccccCCccccc---cc-----------cccccccceecCCeEEEeE---------------------EEEEEEEEcCcc
Confidence 999998653200 00 0011223567888888777 999999999999
Q ss_pred ce---eecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhH
Q 002392 280 KV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLA 356 (928)
Q Consensus 280 ki---~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 356 (928)
.+ ...... +..++|+++.++++..++..+.++++++.++++.+... +|
T Consensus 233 ~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~---------~~------------------- 283 (867)
T TIGR01524 233 WFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKG---------DW------------------- 283 (867)
T ss_pred HHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcC---------CH-------------------
Confidence 75 333444 45578999999999999888887777666554432110 12
Q ss_pred HHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCcccccee
Q 002392 357 AFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSM 436 (928)
Q Consensus 357 ~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m 436 (928)
...+..++.+++.+||++||++++++...++.+| +++++++|+++.+|+||++++||||||||||+|+|
T Consensus 284 -~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m----------ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m 352 (867)
T TIGR01524 284 -LEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINM----------SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKI 352 (867)
T ss_pred -HHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH----------HhCCcEEccchhhhhccCccEEEecCCCccccCeE
Confidence 2367788899999999999999999999999988 89999999999999999999999999999999999
Q ss_pred EEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHH
Q 002392 437 EFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQ 516 (928)
Q Consensus 437 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 516 (928)
++.+++.... . ...
T Consensus 353 ~v~~~~~~~~---~---------------------------------------------------------------~~~ 366 (867)
T TIGR01524 353 ELEKHIDSSG---E---------------------------------------------------------------TSE 366 (867)
T ss_pred EEEEEecCCC---C---------------------------------------------------------------CHH
Confidence 9988641100 0 001
Q ss_pred HHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeeccc
Q 002392 517 KFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFT 596 (928)
Q Consensus 517 ~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~ 596 (928)
+++...++|.... ...+||.|.|+++++....... ....|+.+..+||+
T Consensus 367 ~~l~~a~l~~~~~-----------~~~~~p~~~Al~~~~~~~~~~~--------------------~~~~~~~~~~~pF~ 415 (867)
T TIGR01524 367 RVLKMAWLNSYFQ-----------TGWKNVLDHAVLAKLDESAARQ--------------------TASRWKKVDEIPFD 415 (867)
T ss_pred HHHHHHHHhCCCC-----------CCCCChHHHHHHHHHHhhchhh--------------------HhhcCceEEEeccC
Confidence 3344444443221 0135999999999987532110 12456778889999
Q ss_pred CCcceeEEEEEcCCCcEEEEEecCchhhHHHhccc---------chhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHH
Q 002392 597 SSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYR 667 (928)
Q Consensus 597 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~ 667 (928)
|+||||+++++++++..++++|||++.|+++|+.. +++.++.+.+.++.++.+|+|++++|||+++.++..
T Consensus 416 s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~ 495 (867)
T TIGR01524 416 FDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEAD 495 (867)
T ss_pred CCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCccccc
Confidence 99999999999876678899999999999999742 223456777888999999999999999998764310
Q ss_pred HHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHc
Q 002392 668 IWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (928)
Q Consensus 668 ~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~ 747 (928)
+ .+..|.+|+|+|+++++||+|++++++|++|+++||+++|+|||+..||.++|+++
T Consensus 496 -~----------------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~l 552 (867)
T TIGR01524 496 -F----------------------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEV 552 (867)
T ss_pred -c----------------------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc
Confidence 0 01236899999999999999999999999999999999999999999999999999
Q ss_pred CCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHH
Q 002392 748 SLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKM 827 (928)
Q Consensus 748 gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~ 827 (928)
||..+. +++|..++.+.++++.+.
T Consensus 553 GI~~~~--------------------------------------------------------v~~g~~l~~~~~~el~~~ 576 (867)
T TIGR01524 553 GIDAND--------------------------------------------------------FLLGADIEELSDEELARE 576 (867)
T ss_pred CCCCCC--------------------------------------------------------eeecHhhhhCCHHHHHHH
Confidence 995321 334444443333333332
Q ss_pred HHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec-CCcchhhhhcCcEeecc--cc
Q 002392 828 FLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FR 904 (928)
Q Consensus 828 ~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~-g~e~~~ak~aAD~vi~~--f~ 904 (928)
.. +..+|+|++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||||+ |++. |+++||+|+++ |.
T Consensus 577 ~~------~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdv--Ak~aADiVLldd~~~ 648 (867)
T TIGR01524 577 LR------KYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADI--AKEASDIILLEKSLM 648 (867)
T ss_pred hh------hCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHH--HHHhCCEEEecCChH
Confidence 22 23499999999999999999999999999999999999999999999996 4555 99999999996 55
Q ss_pred cchhhhhhhchhhhhhccccccc
Q 002392 905 FLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 905 ~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
.+..+ +.+||..|+|+++++.|
T Consensus 649 ~I~~a-i~~gR~i~~ni~k~i~~ 670 (867)
T TIGR01524 649 VLEEG-VIEGRNTFGNILKYLKM 670 (867)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHH
Confidence 69998 99999999999999876
No 17
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=8.4e-87 Score=802.29 Aligned_cols=585 Identities=19% Similarity=0.246 Sum_probs=479.7
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCchhhHHHHHHHHHHHhHHHHHHHH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWR 127 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~ 127 (928)
.++|+++||.|.++..+.++| +.|++||.+|+++.++++++++++. +.|...+.++++++++.+.+++++++
T Consensus 7 a~~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~lL~~aa~~s~~~----~~~~~~~~i~~~~~i~~~i~~~qe~~ 78 (755)
T TIGR01647 7 AKKRLAKYGPNELPEKKVSPL----LKFLGFFWNPLSWVMEAAAIIAIAL----ENWVDFVIILGLLLLNATIGFIEENK 78 (755)
T ss_pred HHHHHHhcCCCCCCCCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhh----cchhhhhhhhhhhHHHHHHHHHHHHH
Confidence 356889999999998666654 7889999999999999999999985 55666667778888888899999999
Q ss_pred HhhhhHHH---hcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCce-EEEEeccCCCCccceee
Q 002392 128 RRKQDIEA---NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGI-CYVETMNLDGETNLKLK 203 (928)
Q Consensus 128 r~~~~~~~---n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~-~~Vd~s~LtGEs~~~~K 203 (928)
..++.+.+ .+.+++|+| ||++++|++++|+|||||.|++||+|||||+|++ |. +.||||+|||||.|+.|
T Consensus 79 a~~~~~~L~~~~~~~~~V~R-dg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~-----g~~~~VDeS~LTGES~PV~K 152 (755)
T TIGR01647 79 AGNAVEALKQSLAPKARVLR-DGKWQEIPASELVPGDVVRLKIGDIVPADCRLFE-----GDYIQVDQAALTGESLPVTK 152 (755)
T ss_pred HHHHHHHHHhhCCCeEEEEE-CCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEe-----cCceEEEcccccCCccceEe
Confidence 98876555 478999999 9999999999999999999999999999999999 54 89999999999999999
Q ss_pred ccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCcccee-
Q 002392 204 RSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVM- 282 (928)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~- 282 (928)
.+++. .|+||.+.+|. +.++|+.||.+|.+.
T Consensus 153 ~~~~~---------------------------v~aGT~v~~G~---------------------~~~~V~~tG~~T~~g~ 184 (755)
T TIGR01647 153 KTGDI---------------------------AYSGSTVKQGE---------------------AEAVVTATGMNTFFGK 184 (755)
T ss_pred ccCCe---------------------------eeccCEEEccE---------------------EEEEEEEcCCccHHHH
Confidence 87653 39999999998 999999999999753
Q ss_pred --ecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHH
Q 002392 283 --QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360 (928)
Q Consensus 283 --~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 360 (928)
.....++..++++|+.+++++.+++++.++++++.++++.++... +| ...
T Consensus 185 i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~--------~~--------------------~~~ 236 (755)
T TIGR01647 185 AAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGE--------SF--------------------REG 236 (755)
T ss_pred HHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------CH--------------------HHH
Confidence 345556667799999999999999888888777766655431110 12 236
Q ss_pred HHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEE
Q 002392 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVK 440 (928)
Q Consensus 361 ~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~ 440 (928)
+..++.+++.+|||+|+++++++...++.++ +++++++|+++.+|.||.+++||||||||||+|+|++.+
T Consensus 237 ~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~----------ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~ 306 (755)
T TIGR01647 237 LQFALVLLVGGIPIAMPAVLSVTMAVGAAEL----------AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDE 306 (755)
T ss_pred HHHHHHHHHHhCCcchHHHHHHHHHHHHHHH----------HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEE
Confidence 7788999999999999999999999999988 899999999999999999999999999999999999999
Q ss_pred EEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHH
Q 002392 441 CSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFR 520 (928)
Q Consensus 441 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 520 (928)
++..+..+. ..+++.
T Consensus 307 ~~~~~~~~~-----------------------------------------------------------------~~~~l~ 321 (755)
T TIGR01647 307 ILPFFNGFD-----------------------------------------------------------------KDDVLL 321 (755)
T ss_pred EEecCCCCC-----------------------------------------------------------------HHHHHH
Confidence 875421010 013455
Q ss_pred HHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcc
Q 002392 521 VLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRK 600 (928)
Q Consensus 521 ~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk 600 (928)
..++|+.. .++||.|.|+++++++.+. ....|+++..+||++.+|
T Consensus 322 ~a~~~~~~-------------~~~~pi~~Ai~~~~~~~~~----------------------~~~~~~~~~~~pf~~~~k 366 (755)
T TIGR01647 322 YAALASRE-------------EDQDAIDTAVLGSAKDLKE----------------------ARDGYKVLEFVPFDPVDK 366 (755)
T ss_pred HHHHhCCC-------------CCCChHHHHHHHHHHHhHH----------------------HHhcCceEEEeccCCCCC
Confidence 55556421 1369999999998876431 023567788999999999
Q ss_pred eeEEEEEcCC-CcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhh
Q 002392 601 RMSVMVRNPE-NQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTS 679 (928)
Q Consensus 601 rmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~ 679 (928)
+|+++++.++ |+.++++|||++.|+++|+.. .+.++.+.+.+++++.+|+|++++|+|..
T Consensus 367 ~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-~~~~~~~~~~~~~~~~~G~rvl~vA~~~~------------------ 427 (755)
T TIGR01647 367 RTEATVEDPETGKRFKVTKGAPQVILDLCDNK-KEIEEKVEEKVDELASRGYRALGVARTDE------------------ 427 (755)
T ss_pred eEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-HHHHHHHHHHHHHHHhCCCEEEEEEEEcC------------------
Confidence 9999998764 778899999999999999753 24566778888999999999999999721
Q ss_pred ccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEE
Q 002392 680 VTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVI 759 (928)
Q Consensus 680 ~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i 759 (928)
|.+|+|+|+++++||+|++++++|++|+++||+++|+|||+..||.++|+++||..+. .
T Consensus 428 ----------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~-----~ 486 (755)
T TIGR01647 428 ----------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNI-----Y 486 (755)
T ss_pred ----------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-----c
Confidence 3689999999999999999999999999999999999999999999999999996421 0
Q ss_pred cCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceE
Q 002392 760 TLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI 839 (928)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i 839 (928)
.++ . +.+|..++.+.++++.+.+.+ + .+
T Consensus 487 ~~~-----~-----------------------------------------l~~~~~~~~~~~~~~~~~~~~----~--~v 514 (755)
T TIGR01647 487 TAD-----V-----------------------------------------LLKGDNRDDLPSGELGEMVED----A--DG 514 (755)
T ss_pred CHH-----H-----------------------------------------hcCCcchhhCCHHHHHHHHHh----C--CE
Confidence 000 0 011111111111222222222 2 39
Q ss_pred EEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec-CCcchhhhhcCcEeecc--cccchhhhhhhchh
Q 002392 840 CCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHW 916 (928)
Q Consensus 840 ~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~-g~e~~~ak~aAD~vi~~--f~~l~~lll~~Gr~ 916 (928)
|+|++|+||..+|+.+|+.|++|+|+|||.||+|+|++|||||||+ |++. |+++||+++++ |..+..+ +.+||.
T Consensus 515 fAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdv--AkeaADivLl~d~l~~I~~a-i~~gR~ 591 (755)
T TIGR01647 515 FAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDA--ARSAADIVLTEPGLSVIVDA-ILESRK 591 (755)
T ss_pred EEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHH--HHHhCCEEEEcCChHHHHHH-HHHHHH
Confidence 9999999999999999999999999999999999999999999995 4455 99999999997 5559998 999999
Q ss_pred hhhhccccccc
Q 002392 917 CYRRISMMVKL 927 (928)
Q Consensus 917 ~~~~i~~~i~y 927 (928)
.|+|+++++.|
T Consensus 592 ~~~ni~k~i~~ 602 (755)
T TIGR01647 592 IFQRMKSYVIY 602 (755)
T ss_pred HHHHHHHHHHH
Confidence 99999999876
No 18
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-84 Score=727.71 Aligned_cols=724 Identities=19% Similarity=0.270 Sum_probs=523.9
Q ss_pred cccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCchhhHHHHHHHHHHHhHHHHHHHHH
Q 002392 49 EVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRR 128 (928)
Q Consensus 49 ~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~r 128 (928)
..|+.-||.|.|..+..+.+ .+|+++..+|++++..+..++|... +++.++..++++...+++...||..+.
T Consensus 167 ~~r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYlFQ~fSv~lW~~d----~Y~~YA~cI~iisv~Si~~sv~e~r~q 238 (1140)
T KOG0208|consen 167 IDRRIIYGRNVISLPIKSIS----QILVKEVLNPFYLFQAFSVALWLAD----SYYYYAFCIVIISVYSIVLSVYETRKQ 238 (1140)
T ss_pred HhHHhhcCCceeeeecccHH----HHHHHhccchHHHHHhHHhhhhhcc----cchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 35677899999999999888 7899999999988888877777764 677788888888889999999998888
Q ss_pred hhhhHHHh--cceeEEEccCCeEEEEeccccccCcEEEecC-CcccCceEEEEeeeCCCceEEEEeccCCCCccceeecc
Q 002392 129 RKQDIEAN--NRKVKVYGQDHTFVETKWKNLRVGDLVKVHK-DEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRS 205 (928)
Q Consensus 129 ~~~~~~~n--~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~-ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~ 205 (928)
.+..+.+- ...|+|+| +|.|+.|.++||+||||+.+.+ +-..|||++|++ |.|.||||+|||||.|+.|.|
T Consensus 239 s~rlr~mv~~~~~V~V~R-~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~-----g~civNEsmLTGESVPv~K~~ 312 (1140)
T KOG0208|consen 239 SIRLRSMVKFTCPVTVIR-DGFWETVDSSELVPGDILYIPPPGKIMPCDALLIS-----GDCIVNESMLTGESVPVTKTP 312 (1140)
T ss_pred HHHHHHHhcCCceEEEEE-CCEEEEEeccccccccEEEECCCCeEeecceEEEe-----CcEEeecccccCCcccccccC
Confidence 88888886 45799999 9999999999999999999999 899999999999 889999999999999999999
Q ss_pred chhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccc---ee
Q 002392 206 LEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTK---VM 282 (928)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tk---i~ 282 (928)
.+.-.+ .+...+.+..-+..+..|.||.+++-+.. -.+-+.++|++||..|. +.
T Consensus 313 l~~~~~--------~~~~~~~~~~~~~rh~lfcGT~vlq~r~~---------------~g~~v~a~V~RTGF~T~KGqLV 369 (1140)
T KOG0208|consen 313 LPMGTD--------SLDSITISMSTNSRHTLFCGTKVLQARAY---------------LGGPVLAMVLRTGFSTTKGQLV 369 (1140)
T ss_pred Cccccc--------cCcCeeechhhcCcceeeccceEEEeecC---------------CCCceEEEEEeccccccccHHH
Confidence 862111 01111223334556678999998864310 12349999999999994 45
Q ss_pred ecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHHHH
Q 002392 283 QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFL 362 (928)
Q Consensus 283 ~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (928)
++...++.....+.+..-+++..+. +++++.+++..+.....+ ..+-..++
T Consensus 370 RsilyPkP~~fkfyrds~~fi~~l~----~ia~~gfiy~~i~l~~~g-------------------------~~~~~iii 420 (1140)
T KOG0208|consen 370 RSILYPKPVNFKFYRDSFKFILFLV----IIALIGFIYTAIVLNLLG-------------------------VPLKTIII 420 (1140)
T ss_pred HhhcCCCCcccHHHHHHHHHHHHHH----HHHHHHHHHHhHhHHHcC-------------------------CCHHHHhh
Confidence 5555555444555555544443333 333333333332221110 01223688
Q ss_pred HHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEEEE
Q 002392 363 TGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCS 442 (928)
Q Consensus 363 ~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~ 442 (928)
+++.++...+|++||.++++.....-.++ ++++|.|-+++.+...|+++.+|||||||||++.+.+-.+.
T Consensus 421 rsLDliTi~VPPALPAaltvG~~~a~~RL----------kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~ 490 (1140)
T KOG0208|consen 421 RSLDLITIVVPPALPAALTVGIIYAQSRL----------KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVV 490 (1140)
T ss_pred hhhcEEEEecCCCchhhhhHHHHHHHHHH----------HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEE
Confidence 99999999999999999999998888888 89999999999999999999999999999999999998876
Q ss_pred EcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHHHH
Q 002392 443 VAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVL 522 (928)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 522 (928)
.-...-... ++. ....+.. . ..+ .++. . +........+..++
T Consensus 491 ~~~~~~~~~-~~~--~~~~~~~----------------------~------~~~--~~l~----~-~~~~~~~~~~~~a~ 532 (1140)
T KOG0208|consen 491 PVERNVDDG-PEL--KVVTEDS----------------------L------QLF--YKLS----L-RSSSLPMGNLVAAM 532 (1140)
T ss_pred ecccccccc-chh--hhhhhhh----------------------c------cce--eecc----c-cccCCchHHHHHHH
Confidence 532211000 000 0000000 0 000 0000 0 00111234788999
Q ss_pred hhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeec--------CCee---EEEecC---CCcccccceEEE
Q 002392 523 AICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSS--------QTSI---SLHELD---PVSGQKVNRVYE 588 (928)
Q Consensus 523 ~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~--------~~~~---~~~~~~---~~~~~~~~~~~~ 588 (928)
|.||++...... ..++|.|.-+.+ ..|+.+.+.+ .+++ .++... +.+.+...+.+-
T Consensus 533 atCHSL~~v~g~-------l~GDPLdlkmfe---~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~s 602 (1140)
T KOG0208|consen 533 ATCHSLTLVDGT-------LVGDPLDLKMFE---STGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEIS 602 (1140)
T ss_pred hhhceeEEeCCe-------eccCceeeeeee---ccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceE
Confidence 999988764432 135787776665 3556664421 0111 111111 111122234799
Q ss_pred EeEeecccCCcceeEEEEEcC-CCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHH
Q 002392 589 LLHVLEFTSSRKRMSVMVRNP-ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYR 667 (928)
Q Consensus 589 il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~ 667 (928)
+++.+||+|..+||||||..+ +.+.++|+|||||.|.+.|+++ .++.++.+.++.|+.+|+|++++|+|.++..
T Consensus 603 i~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~--tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~--- 677 (1140)
T KOG0208|consen 603 IVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE--TVPADYQEVLKEYTHQGFRVIALASKELETS--- 677 (1140)
T ss_pred EEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcc--cCCccHHHHHHHHHhCCeEEEEEecCccCcc---
Confidence 999999999999999999986 4678999999999999999976 6788999999999999999999999999876
Q ss_pred HHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHc
Q 002392 668 IWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (928)
Q Consensus 668 ~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~ 747 (928)
.|.+..+ . .++.+|+||+|+|++.+|++||+.++.+|++|.+|+|+++|+|||+..||+.+|++|
T Consensus 678 ~~~~~~~-------~--------~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeC 742 (1140)
T KOG0208|consen 678 TLQKAQK-------L--------SRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKEC 742 (1140)
T ss_pred hHHHHhh-------c--------cHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcc
Confidence 3433221 2 337889999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCceEEEEcCCCchhhH-----hhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHH
Q 002392 748 SLLRQEMKQIVITLDSPDMEA-----LEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK 822 (928)
Q Consensus 748 gi~~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~ 822 (928)
|++.+...++...-...+... +...+...... ......... ..............+.+.++|+.++.+. .
T Consensus 743 gmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~--~~~~~~~~~--~~~~~~~d~~~~~~yhlA~sG~~f~~i~-~ 817 (1140)
T KOG0208|consen 743 GMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFL--DPKEPDPDL--ASVKLSLDVLSEKDYHLAMSGKTFQVIL-E 817 (1140)
T ss_pred cccCCCCeEEEEeccCCccCCCceeEEEEccCccccC--CCCccCccc--cCCccChhhhccceeEEEecCchhHHHH-h
Confidence 999998877766444211110 00000000000 000000000 0000000111345689999999999988 5
Q ss_pred HHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeec-
Q 002392 823 KLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIA- 901 (928)
Q Consensus 823 ~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~- 901 (928)
+..+.+.++...+. |||||+|.||.++|+.+|+.|+.|+|||||+||++||++|||||+++.+| |.-||.|.-.
T Consensus 818 ~~~~l~~~Il~~~~--VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSeaE---ASvAApFTSk~ 892 (1140)
T KOG0208|consen 818 HFPELVPKILLKGT--VFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEAE---ASVAAPFTSKT 892 (1140)
T ss_pred hcHHHHHHHHhcCe--EEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhhh---HhhcCccccCC
Confidence 66667777777666 99999999999999999999999999999999999999999999998887 7889999887
Q ss_pred -ccccchhhhhhhchhh----hhhccccccc
Q 002392 902 -QFRFLERLLLVHGHWC----YRRISMMVKL 927 (928)
Q Consensus 902 -~f~~l~~lll~~Gr~~----~~~i~~~i~y 927 (928)
+-+.+..+ +.+||.. |...+.+.+|
T Consensus 893 ~~I~cVp~v-IrEGRaALVTSf~~FkYMalY 922 (1140)
T KOG0208|consen 893 PSISCVPDV-IREGRAALVTSFACFKYMALY 922 (1140)
T ss_pred CchhhHhHH-HhhhhhhhhhhHHHHHHHHHH
Confidence 66778888 9999975 4444444444
No 19
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-78 Score=673.01 Aligned_cols=677 Identities=20% Similarity=0.239 Sum_probs=525.3
Q ss_pred cccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc--C--CC-----CCCchhhHHHHHHHHHHHh
Q 002392 49 EVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP--L--AP-----YSAPSVLAPLIVVIGATMA 119 (928)
Q Consensus 49 ~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~--~--~~-----~~~~~~~~~l~~vl~i~~~ 119 (928)
.+++.+-|+|..+.+|.+.-+ ..+..|+...+.+.+++.++++++. + +. -......+.|+.+++++.+
T Consensus 65 ~~~L~rdG~NaL~Ppk~t~~w---ikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~ 141 (1019)
T KOG0203|consen 65 AEKLARDGPNALTPPKTTPEW---IKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGL 141 (1019)
T ss_pred HhhhccCCCCCCCCCCCChHH---HHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEec
Confidence 366889999999999987643 5677899999999999999999875 1 11 1122333445666666777
Q ss_pred HHHHHHHHHhhh---hHHHhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCC
Q 002392 120 KEGVEDWRRRKQ---DIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDG 196 (928)
Q Consensus 120 ~~~~~~~~r~~~---~~~~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtG 196 (928)
...+++.+..+- .+.+-++.++|+| ||....+..++|+|||+|.++-|++||||++++++.+ |+||+|+|||
T Consensus 142 ~~~~qe~ks~~im~sF~~l~P~~~~ViR-dg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslTG 216 (1019)
T KOG0203|consen 142 FSYYQEAKSSKIMDSFKNLVPQQALVIR-DGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLTG 216 (1019)
T ss_pred CCCccchhhHHHHHHHhccchhhheeee-cceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEecccccc
Confidence 677666555443 3444589999999 9999999999999999999999999999999999887 9999999999
Q ss_pred CccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEec
Q 002392 197 ETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTG 276 (928)
Q Consensus 197 Es~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG 276 (928)
||.|..+.|.....+.. |. ....|.+|..++|. ++|+|++||
T Consensus 217 esEP~~~~~~~t~~~~~--------------Et---~Ni~f~st~~veG~---------------------~~givi~tG 258 (1019)
T KOG0203|consen 217 ESEPQTRSPEFTHENPL--------------ET---RNIAFFSTNCVEGT---------------------GRGIVIATG 258 (1019)
T ss_pred ccCCccCCccccccCch--------------hh---eeeeeeeeEEecce---------------------EEEEEEecC
Confidence 99999998754321111 11 11448899999998 999999999
Q ss_pred CccceeecC---CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCc
Q 002392 277 HDTKVMQNA---TDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRA 353 (928)
Q Consensus 277 ~~Tki~~~~---~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 353 (928)
.+|.+++.. ......++|+++.+++++.++..+.+++.+..+++..+..+ .|
T Consensus 259 d~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy---------~~---------------- 313 (1019)
T KOG0203|consen 259 DRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGY---------EW---------------- 313 (1019)
T ss_pred CceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcc---------hh----------------
Confidence 999875554 34567789999999999999988887777766655544321 22
Q ss_pred hhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCcccc
Q 002392 354 PLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTC 433 (928)
Q Consensus 354 ~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~ 433 (928)
+..+...+.+++..+|.+|+++++....+-+.+| +++++++|++.+.|.||..++||+|||||||+
T Consensus 314 ----l~avv~~i~iivAnvPeGL~~tvTv~LtltakrM----------a~Knc~vknLeavetlGsts~I~SDktGTlTq 379 (1019)
T KOG0203|consen 314 ----LRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQ 379 (1019)
T ss_pred ----HHHhhhhheeEEecCcCCccceehhhHHHHHHHH----------hhceeEEeeeeheeecccceeEeecceeeEEe
Confidence 3345558889999999999999999999999998 99999999999999999999999999999999
Q ss_pred ceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchh
Q 002392 434 NSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSD 513 (928)
Q Consensus 434 n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 513 (928)
|.|+|.++|.++........+.. ++ ......+.
T Consensus 380 nrMtVahlw~d~~i~~~d~~~~~-----------------------------------~~------------~~~~~~~~ 412 (1019)
T KOG0203|consen 380 NRMTVAHLWFDNQIHEADTTEDQ-----------------------------------SG------------QSFDKSSA 412 (1019)
T ss_pred cceEEEeeccCCceeeeechhhh-----------------------------------hc------------ccccccCc
Confidence 99999999988765432211100 00 00011244
Q ss_pred HHHHHHHHHhhhcccccCCCCCCC--ceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeE
Q 002392 514 VIQKFFRVLAICHTAIPDVNEETG--EISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLH 591 (928)
Q Consensus 514 ~~~~~~~~l~lc~~~~~~~~~~~~--~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 591 (928)
....+.++..+||.+.....+..- .-.-..+++.|.||++++.-.-... ...++.++.+.
T Consensus 413 ~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~------------------~~~R~~~~kv~ 474 (1019)
T KOG0203|consen 413 TFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV------------------MELRERNPKVA 474 (1019)
T ss_pred hHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH------------------HHHHHhhHHhh
Confidence 566899999999999776433211 1223458999999999987532211 12356788899
Q ss_pred eecccCCcceeEEEEEcCC---CcEEEEEecCchhhHHHhccc---------chhhHHHHHHHHHHHHhcCCeeeEEEEE
Q 002392 592 VLEFTSSRKRMSVMVRNPE---NQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAYR 659 (928)
Q Consensus 592 ~~~F~s~rkrmsviv~~~~---~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A~k 659 (928)
.+||+|.+|++-.+.+..+ .+..+.+|||||.++++|+.. ++...+.+.+....+...|-||+.||++
T Consensus 475 eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~ 554 (1019)
T KOG0203|consen 475 EIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDL 554 (1019)
T ss_pred cCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHH
Confidence 9999999999999998754 578899999999999999863 4456777888888999999999999999
Q ss_pred ccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhh
Q 002392 660 ELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (928)
Q Consensus 660 ~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~t 739 (928)
.++++++.+...-.- .. .+.--.++.|+|++++-||+|..+|+|+.+||.|||||+|+|||++.|
T Consensus 555 ~l~~~~~p~~~~f~~---d~------------~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiT 619 (1019)
T KOG0203|consen 555 ELPDEKFPRGFQFDT---DD------------VNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT 619 (1019)
T ss_pred hcchhcCCCceEeec---CC------------CCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccch
Confidence 999887654321100 00 011225899999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHH
Q 002392 740 AINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFA 819 (928)
Q Consensus 740 a~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~ 819 (928)
|.++|++.||+..+..... .+..++....... +.....+.|++|.+|..+
T Consensus 620 AkAiA~~vgIi~~~~et~e--------------------------~~a~r~~~~v~~v----n~~~a~a~VihG~eL~~~ 669 (1019)
T KOG0203|consen 620 AKAIAKSVGIISEGSETVE--------------------------DIAKRLNIPVEQV----NSRDAKAAVIHGSELPDM 669 (1019)
T ss_pred hhhhhhheeeecCCchhhh--------------------------hhHHhcCCccccc----CccccceEEEeccccccc
Confidence 9999999999865432110 0111111111111 123356889999999877
Q ss_pred hHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEe--cCCcchhhhhcCc
Q 002392 820 LDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVMSSD 897 (928)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam--~g~e~~~ak~aAD 897 (928)
-.+++. ++..+....||||.+|+||..||+..|+.|.+|..+|||.||.|||+.||||||| +|++. +|.|||
T Consensus 670 ~~~qld----~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDv--sKqAAD 743 (1019)
T KOG0203|consen 670 SSEQLD----ELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAAD 743 (1019)
T ss_pred CHHHHH----HHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchH--HHhhcc
Confidence 655444 4445566789999999999999999999999999999999999999999999998 67888 899999
Q ss_pred Eeeccccc--chhhhhhhchhhhhhccccccc
Q 002392 898 YAIAQFRF--LERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 898 ~vi~~f~~--l~~lll~~Gr~~~~~i~~~i~y 927 (928)
.|++|++| ++.- +.+||.+|.|++|.|.|
T Consensus 744 mILLDDNFASIVtG-VEEGRLiFDNLKKsIAY 774 (1019)
T KOG0203|consen 744 MILLDDNFASIVTG-VEEGRLIFDNLKKSIAY 774 (1019)
T ss_pred eEEecCcchhheee-cccceehhhhHHHHHHH
Confidence 99998555 7777 89999999999999988
No 20
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.6e-74 Score=671.64 Aligned_cols=516 Identities=21% Similarity=0.213 Sum_probs=413.5
Q ss_pred HHHHHHHHHHHHHHHHHhccc-CCC------CCCchhh---HHHHHHHHHHHhHHHHHHHHHhhhhHHHh---cc-eeEE
Q 002392 77 EQFRRVANIYFLVVAFVSFSP-LAP------YSAPSVL---APLIVVIGATMAKEGVEDWRRRKQDIEAN---NR-KVKV 142 (928)
Q Consensus 77 ~qf~~~~n~~~l~~~il~~~~-~~~------~~~~~~~---~~l~~vl~i~~~~~~~~~~~r~~~~~~~n---~~-~~~v 142 (928)
.||++|..+.+++.++++++. +.+ ..+...+ +.+++.++++.+.+.+.++|.+++.+.+. +. +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 488999999999999999875 211 1111222 33344455556667778877777655554 43 6999
Q ss_pred EccCCe-EEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeeccchhhccCCChhhhccc
Q 002392 143 YGQDHT-FVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKF 221 (928)
Q Consensus 143 ~r~~g~-~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~ 221 (928)
+| +|+ +++|++++|++||+|.|++||.|||||+|++ |.+.||||.|||||.|+.|.+++..
T Consensus 109 ir-~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vie-----G~a~VDESaLTGES~PV~K~~G~~~------------ 170 (679)
T PRK01122 109 LR-EPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIE-----GVASVDESAITGESAPVIRESGGDF------------ 170 (679)
T ss_pred EE-CCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEE-----ccEEEEcccccCCCCceEeCCCCcc------------
Confidence 99 877 9999999999999999999999999999999 7789999999999999999986431
Q ss_pred eEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccce---eecCCCCCCcccHHHHH
Q 002392 222 TAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERK 298 (928)
Q Consensus 222 ~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~~~~~ 298 (928)
...|+||.+++|. +.++|+.+|.+|.+ ......++.+++|+|+.
T Consensus 171 ------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~a 217 (679)
T PRK01122 171 ------------SSVTGGTRVLSDW---------------------IVIRITANPGESFLDRMIALVEGAKRQKTPNEIA 217 (679)
T ss_pred ------------CeEEeceEEEeee---------------------EEEEEEEecccCHHHHHHHHHHhccccCCHHHHH
Confidence 1359999999988 99999999999965 44556677778999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHHHHHHHHHHhccccceeeh
Q 002392 299 MDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYI 378 (928)
Q Consensus 299 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v 378 (928)
++.+...++.+.++++++.+.+. ||... -..+...+.+++.+|||+|+.
T Consensus 218 l~~l~~~l~~i~l~~~~~~~~~~---------------~~~g~----------------~~~l~~~iallV~aiP~alg~ 266 (679)
T PRK01122 218 LTILLAGLTIIFLLVVATLPPFA---------------AYSGG----------------ALSITVLVALLVCLIPTTIGG 266 (679)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHH---------------HHhCc----------------hHHHHHHHHHHHHcccchhhh
Confidence 88877666544443333222211 11100 015667788899999999999
Q ss_pred hHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEEEEEcCeeccCcchHHHHH
Q 002392 379 SIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERT 458 (928)
Q Consensus 379 ~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~ 458 (928)
.++++...++.++ .++++++|+...+|.||++++||||||||||+|+|.+..++..+..
T Consensus 267 l~~~i~i~g~~r~----------ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~----------- 325 (679)
T PRK01122 267 LLSAIGIAGMDRV----------LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV----------- 325 (679)
T ss_pred HHHHHHHHHHHHH----------hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC-----------
Confidence 9998888888888 8999999999999999999999999999999999999887532110
Q ss_pred HHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCc
Q 002392 459 LAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGE 538 (928)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~ 538 (928)
..++++.+.++|+..
T Consensus 326 -------------------------------------------------------~~~~ll~~a~~~s~~---------- 340 (679)
T PRK01122 326 -------------------------------------------------------TEEELADAAQLSSLA---------- 340 (679)
T ss_pred -------------------------------------------------------CHHHHHHHHHHhcCC----------
Confidence 012456666666443
Q ss_pred eEeecCCccHHHHHHHHHH-cCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEE
Q 002392 539 ISYEAESPDEAAFVIAARE-VGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLC 617 (928)
Q Consensus 539 ~~~~~~sp~e~al~~~a~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~ 617 (928)
..||...|+++++++ .++... ...++....+||++.+++|++.+. | ..|+
T Consensus 341 ----s~hP~~~AIv~~a~~~~~~~~~--------------------~~~~~~~~~~pF~s~~~~~gv~~~---g--~~~~ 391 (679)
T PRK01122 341 ----DETPEGRSIVVLAKQRFNLRER--------------------DLQSLHATFVPFSAQTRMSGVDLD---G--REIR 391 (679)
T ss_pred ----CCCchHHHHHHHHHhhcCCCch--------------------hhccccceeEeecCcCceEEEEEC---C--EEEE
Confidence 248999999999986 343210 112455678899999988888653 3 5789
Q ss_pred ecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhc
Q 002392 618 KGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIER 697 (928)
Q Consensus 618 KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~ 697 (928)
||+++.|++.|...+...++++.+..++++++|+|++++| .
T Consensus 392 kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va---------------------------------------~ 432 (679)
T PRK01122 392 KGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVA---------------------------------------E 432 (679)
T ss_pred ECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEE---------------------------------------E
Confidence 9999999999976544556777888899999999999999 3
Q ss_pred CceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhH
Q 002392 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 777 (928)
Q Consensus 698 ~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 777 (928)
|++++|+++++|++|++++++|++||++||+++|+|||++.||.++|+++||.
T Consensus 433 ~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId--------------------------- 485 (679)
T PRK01122 433 DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD--------------------------- 485 (679)
T ss_pred CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc---------------------------
Confidence 67899999999999999999999999999999999999999999999999993
Q ss_pred HHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhc
Q 002392 778 ITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG 857 (928)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~ 857 (928)
.+++|++|++|..+|+.+|+
T Consensus 486 ------------------------------------------------------------~v~A~~~PedK~~iV~~lQ~ 505 (679)
T PRK01122 486 ------------------------------------------------------------DFLAEATPEDKLALIRQEQA 505 (679)
T ss_pred ------------------------------------------------------------EEEccCCHHHHHHHHHHHHH
Confidence 17899999999999999999
Q ss_pred CCCEEEEEcCChhcHHHHHhCCeeEEec-CCcchhhhhcCcEeecc--cccchhhhhhhchhhh
Q 002392 858 TGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCY 918 (928)
Q Consensus 858 ~g~~vlaiGDG~ND~~ml~~A~vGIam~-g~e~~~ak~aAD~vi~~--f~~l~~lll~~Gr~~~ 918 (928)
.|+.|+|+|||.||.|+|++|||||||+ |++. |+++||+|+++ |..|..+ +.+||...
T Consensus 506 ~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~~s~Iv~a-v~~GR~~~ 566 (679)
T PRK01122 506 EGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAGNMVDLDSNPTKLIEV-VEIGKQLL 566 (679)
T ss_pred cCCeEEEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEEeCCCHHHHHHH-HHHHHHHH
Confidence 9999999999999999999999999994 5555 99999999996 5558888 89999865
No 21
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1e-74 Score=672.59 Aligned_cols=523 Identities=18% Similarity=0.207 Sum_probs=404.3
Q ss_pred HHHHHHHHHHHHHHHHHhccc--CCC----CCC-chhhHHHHHHHH----HHHhHHHHHHHHHhhhhHHHh---cc-eeE
Q 002392 77 EQFRRVANIYFLVVAFVSFSP--LAP----YSA-PSVLAPLIVVIG----ATMAKEGVEDWRRRKQDIEAN---NR-KVK 141 (928)
Q Consensus 77 ~qf~~~~n~~~l~~~il~~~~--~~~----~~~-~~~~~~l~~vl~----i~~~~~~~~~~~r~~~~~~~n---~~-~~~ 141 (928)
.+|++|..+.++++++++++. +.. .+| ..+.+.++++++ ++.+.|.+.++|.+++.+.+. +. +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 367889999999999998865 211 011 112222233333 333344444666666655444 43 576
Q ss_pred -EEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeeccchhhccCCChhhhcc
Q 002392 142 -VYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQK 220 (928)
Q Consensus 142 -v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 220 (928)
|.| ||++++|++++|+|||+|.|++||.|||||+|++ |.+.||||+|||||.|+.|.++.+.
T Consensus 108 ~v~r-dg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~d~----------- 170 (673)
T PRK14010 108 RIKQ-DGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIK-----GLATVDESAITGESAPVIKESGGDF----------- 170 (673)
T ss_pred EEEe-CCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEE-----cceEEecchhcCCCCceeccCCCcc-----------
Confidence 567 9999999999999999999999999999999999 7789999999999999999986211
Q ss_pred ceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccce---eecCCCCCCcccHHHH
Q 002392 221 FTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIER 297 (928)
Q Consensus 221 ~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~~~~ 297 (928)
...|+||.+.+|. +.++|+.||.+|.+ ......++.+++|+|.
T Consensus 171 -------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~ 216 (673)
T PRK14010 171 -------------DNVIGGTSVASDW---------------------LEVEITSEPGHSFLDKMIGLVEGATRKKTPNEI 216 (673)
T ss_pred -------------CeeecCceeecce---------------------EEEEEEEecccCHHHHHHHHHhhccccCCHHHH
Confidence 0259999999998 99999999999964 4556677778899998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHHHHHHHHHHhccccceee
Q 002392 298 KMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLY 377 (928)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~ 377 (928)
.+..+...++++.+ +++.++.. ++. |. .+...+...+.+++.+||++|+
T Consensus 217 ~l~~l~~~l~ii~l--~~~~~~~~-~~~------------~~----------------~~~~~~~~~val~V~~IP~aL~ 265 (673)
T PRK14010 217 ALFTLLMTLTIIFL--VVILTMYP-LAK------------FL----------------NFNLSIAMLIALAVCLIPTTIG 265 (673)
T ss_pred HHHHHHHHHhHHHH--HHHHHHHH-HHh------------hc----------------cHHHHHHHHHHHHHHhhhhhHH
Confidence 77665444332211 11111110 000 00 0112445566666778999999
Q ss_pred hhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEEEEEcCeeccCcchHHHH
Q 002392 378 ISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVER 457 (928)
Q Consensus 378 v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~ 457 (928)
..++++...++.++ +++++++|++..+|.||.++++|||||||||+|++.+..+.....
T Consensus 266 ~~~~~~~~~g~~r~----------ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~----------- 324 (673)
T PRK14010 266 GLLSAIGIAGMDRV----------TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS----------- 324 (673)
T ss_pred HHHHHHHHHHHHHH----------hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC-----------
Confidence 99999999999888 999999999999999999999999999999998877765431100
Q ss_pred HHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCC
Q 002392 458 TLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETG 537 (928)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~ 537 (928)
....+++...++|+..
T Consensus 325 -------------------------------------------------------~~~~~ll~~a~~~~~~--------- 340 (673)
T PRK14010 325 -------------------------------------------------------SSFERLVKAAYESSIA--------- 340 (673)
T ss_pred -------------------------------------------------------ccHHHHHHHHHHhcCC---------
Confidence 0112455666677532
Q ss_pred ceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEE
Q 002392 538 EISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLC 617 (928)
Q Consensus 538 ~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~ 617 (928)
+.||.+.|+++++++.|+.... .....+||++++|+|++.++ ++ .+.
T Consensus 341 -----s~~P~~~AIv~~a~~~~~~~~~-----------------------~~~~~~pF~~~~k~~gv~~~---g~--~i~ 387 (673)
T PRK14010 341 -----DDTPEGRSIVKLAYKQHIDLPQ-----------------------EVGEYIPFTAETRMSGVKFT---TR--EVY 387 (673)
T ss_pred -----CCChHHHHHHHHHHHcCCCchh-----------------------hhcceeccccccceeEEEEC---CE--EEE
Confidence 2499999999999987653210 01123799999999999753 33 455
Q ss_pred ecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhc
Q 002392 618 KGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIER 697 (928)
Q Consensus 618 KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~ 697 (928)
|||++.++++|...+...+..+.+..++++++|+|+++++ .
T Consensus 388 kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~---------------------------------------~ 428 (673)
T PRK14010 388 KGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVL---------------------------------------E 428 (673)
T ss_pred ECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEE---------------------------------------E
Confidence 9999999999986433344456677788999999999987 4
Q ss_pred CceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhH
Q 002392 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 777 (928)
Q Consensus 698 ~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 777 (928)
|++++|+++++|++|++++++|++||++||+++|+|||+..||.++|+++||.
T Consensus 429 ~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~--------------------------- 481 (673)
T PRK14010 429 DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD--------------------------- 481 (673)
T ss_pred CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc---------------------------
Confidence 78999999999999999999999999999999999999999999999999993
Q ss_pred HHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhc
Q 002392 778 ITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG 857 (928)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~ 857 (928)
.+++|++|+||.++|+.+|+
T Consensus 482 ------------------------------------------------------------~v~A~~~PedK~~iV~~lQ~ 501 (673)
T PRK14010 482 ------------------------------------------------------------RFVAECKPEDKINVIREEQA 501 (673)
T ss_pred ------------------------------------------------------------eEEcCCCHHHHHHHHHHHHh
Confidence 17899999999999999999
Q ss_pred CCCEEEEEcCChhcHHHHHhCCeeEEec-CCcchhhhhcCcEeecc--cccchhhhhhhchhhhhhcccccccC
Q 002392 858 TGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 858 ~g~~vlaiGDG~ND~~ml~~A~vGIam~-g~e~~~ak~aAD~vi~~--f~~l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
.|+.|+|+|||.||.|+|++|||||||+ |++. |+++||+|+++ |..|..+ +.+||..|.++++++.|+
T Consensus 502 ~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~ls~Iv~a-v~~gR~i~~n~~~~~~f~ 572 (673)
T PRK14010 502 KGHIVAMTGDGTNDAPALAEANVGLAMNSGTMS--AKEAANLIDLDSNPTKLMEV-VLIGKQLLMTRGSLTTFS 572 (673)
T ss_pred CCCEEEEECCChhhHHHHHhCCEEEEeCCCCHH--HHHhCCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHhee
Confidence 9999999999999999999999999994 5555 99999999996 5559998 999999999999999885
No 22
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=2.2e-71 Score=643.66 Aligned_cols=528 Identities=19% Similarity=0.232 Sum_probs=415.2
Q ss_pred HHHHHHHHHHHHHHHHHhccc-CCC-------C--CCchhh--HHHHHHHHHHHhHHHHHHHHHhhhhHHHh---cc-ee
Q 002392 77 EQFRRVANIYFLVVAFVSFSP-LAP-------Y--SAPSVL--APLIVVIGATMAKEGVEDWRRRKQDIEAN---NR-KV 140 (928)
Q Consensus 77 ~qf~~~~n~~~l~~~il~~~~-~~~-------~--~~~~~~--~~l~~vl~i~~~~~~~~~~~r~~~~~~~n---~~-~~ 140 (928)
.||++|..+.+++.++++++. +.+ . .|+... +.+++.+++..+.+.+.++|.+++.+.+. +. .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 488999999999999998874 211 1 233222 22333455666667888888888766665 33 47
Q ss_pred EEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeeccchhhccCCChhhhcc
Q 002392 141 KVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQK 220 (928)
Q Consensus 141 ~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 220 (928)
+|+|+||++++|++++|+|||+|.|++||.|||||+|++ |.+.||||.|||||.|+.|.+++..
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~~~----------- 171 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIE-----GVASVDESAITGESAPVIKESGGDF----------- 171 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE-----ccEEEEcccccCCCCceeecCCCCc-----------
Confidence 887548999999999999999999999999999999999 7799999999999999999986532
Q ss_pred ceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccce---eecCCCCCCcccHHHH
Q 002392 221 FTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIER 297 (928)
Q Consensus 221 ~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~~~~ 297 (928)
...|+||.+.+|. +.++|+.+|.+|.+ ....+.++.+++|+|.
T Consensus 172 -------------~~V~aGT~v~~G~---------------------~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~ 217 (675)
T TIGR01497 172 -------------ASVTGGTRILSDW---------------------LVVECTANPGETFLDRMIALVEGAQRRKTPNEI 217 (675)
T ss_pred -------------ceeecCcEEEeeE---------------------EEEEEEEecccCHHHHHHHHHHhcccCCChHHH
Confidence 0258999999888 99999999999954 4555667777899998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHHHHHHHHHHhccccceee
Q 002392 298 KMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLY 377 (928)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~ 377 (928)
.++.+..++.++.++++++ ++.+.. | .. ....+...+.+++.+||++|+
T Consensus 218 ~l~~l~~~l~~v~li~~~~---~~~~~~-----------~-~~----------------~~~~~~~lvallV~aiP~aLg 266 (675)
T TIGR01497 218 ALTILLIALTLVFLLVTAT---LWPFAA-----------Y-GG----------------NAISVTVLVALLVCLIPTTIG 266 (675)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHH-----------h-cC----------------hhHHHHHHHHHHHHhCchhhh
Confidence 8888776654433332221 221110 0 00 001345557889999999887
Q ss_pred hhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEEEEEcCeeccCcchHHHH
Q 002392 378 ISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVER 457 (928)
Q Consensus 378 v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~ 457 (928)
...+.+...++.++ .++++++|+...+|.||++++||||||||||+|+|++..++..+..
T Consensus 267 ~l~~av~iag~~r~----------ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~---------- 326 (675)
T TIGR01497 267 GLLSAIGIAGMDRV----------LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV---------- 326 (675)
T ss_pred hHHHHHHHHHHHHH----------HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC----------
Confidence 77777767778877 8999999999999999999999999999999999999987632100
Q ss_pred HHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCC
Q 002392 458 TLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETG 537 (928)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~ 537 (928)
..++++...++|+..
T Consensus 327 --------------------------------------------------------~~~~ll~~aa~~~~~--------- 341 (675)
T TIGR01497 327 --------------------------------------------------------DEKTLADAAQLASLA--------- 341 (675)
T ss_pred --------------------------------------------------------cHHHHHHHHHHhcCC---------
Confidence 012456666666433
Q ss_pred ceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEE
Q 002392 538 EISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLC 617 (928)
Q Consensus 538 ~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~ 617 (928)
+.||.+.|++++|++.|..... ..++.....||++.+++|++.+. +| ..+.
T Consensus 342 -----s~hP~a~Aiv~~a~~~~~~~~~--------------------~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~ 392 (675)
T TIGR01497 342 -----DDTPEGKSIVILAKQLGIREDD--------------------VQSLHATFVEFTAQTRMSGINLD--NG--RMIR 392 (675)
T ss_pred -----CCCcHHHHHHHHHHHcCCCccc--------------------cccccceEEEEcCCCcEEEEEEe--CC--eEEE
Confidence 2589999999999987653211 12334567899999877776554 34 4789
Q ss_pred ecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhc
Q 002392 618 KGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIER 697 (928)
Q Consensus 618 KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~ 697 (928)
||+++.+++.|...+...+..+.+.++.++++|+|++++|+
T Consensus 393 kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~--------------------------------------- 433 (675)
T TIGR01497 393 KGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCE--------------------------------------- 433 (675)
T ss_pred ECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEE---------------------------------------
Confidence 99999999988755444556778888999999999999993
Q ss_pred CceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhH
Q 002392 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 777 (928)
Q Consensus 698 ~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 777 (928)
+.+++|+++++|++||+++++|++|+++||+++|+|||+..+|..+|+++|+.
T Consensus 434 ~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~--------------------------- 486 (675)
T TIGR01497 434 DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD--------------------------- 486 (675)
T ss_pred CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC---------------------------
Confidence 56899999999999999999999999999999999999999999999999993
Q ss_pred HHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhc
Q 002392 778 ITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG 857 (928)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~ 857 (928)
.+++|++|++|..+++.+++
T Consensus 487 ------------------------------------------------------------~v~a~~~PedK~~~v~~lq~ 506 (675)
T TIGR01497 487 ------------------------------------------------------------DFIAEATPEDKIALIRQEQA 506 (675)
T ss_pred ------------------------------------------------------------EEEcCCCHHHHHHHHHHHHH
Confidence 17889999999999999988
Q ss_pred CCCEEEEEcCChhcHHHHHhCCeeEEec-CCcchhhhhcCcEeecc--cccchhhhhhhchhhhhhcccccccC
Q 002392 858 TGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 858 ~g~~vlaiGDG~ND~~ml~~A~vGIam~-g~e~~~ak~aAD~vi~~--f~~l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
.|+.|+|+|||.||++||++|||||+|+ |++. |+++||+++++ |..|..+ +.+||..+-.-..+..||
T Consensus 507 ~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~--akeaadivLldd~~s~Iv~a-v~~GR~~~~t~~~~~t~~ 577 (675)
T TIGR01497 507 EGKLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAANMVDLDSDPTKLIEV-VHIGKQLLITRGALTTFS 577 (675)
T ss_pred cCCeEEEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHheee
Confidence 8999999999999999999999999995 3444 99999999997 5558888 899999987666555554
No 23
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-70 Score=601.75 Aligned_cols=641 Identities=21% Similarity=0.263 Sum_probs=452.3
Q ss_pred ccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCchhhHHHHHHHHHHHhHHHHHHHHHhhh
Q 002392 52 QLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRKQ 131 (928)
Q Consensus 52 ~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~r~~~ 131 (928)
..+||+|+.....+++- .++.|.-..|+..|..+...+|+.- ..||..+..|++++.+- +---++|.+.
T Consensus 173 ~~~~G~N~fdi~vPtF~----eLFkE~A~aPfFVFQVFcvgLWCLD---eyWYySlFtLfMli~fE----~tlV~Qrm~~ 241 (1160)
T KOG0209|consen 173 KHKYGKNKFDIVVPTFS----ELFKEHAVAPFFVFQVFCVGLWCLD---EYWYYSLFTLFMLIAFE----ATLVKQRMRT 241 (1160)
T ss_pred HHHhcCCccccCCccHH----HHHHHhccCceeeHhHHhHHHHHhH---HHHHHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 34599999999999877 6788888889888888888888874 34666666666655543 3333455555
Q ss_pred h---HHHh--cceeEEEccCCeEEEEeccccccCcEEEecC---CcccCceEEEEeeeCCCceEEEEeccCCCCccceee
Q 002392 132 D---IEAN--NRKVKVYGQDHTFVETKWKNLRVGDLVKVHK---DEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLK 203 (928)
Q Consensus 132 ~---~~~n--~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~---ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K 203 (928)
. +.+. +..+.|+| +++|+.+...||.|||+|.|.. ...||||++||. |.|.|||++|||||.|..|
T Consensus 242 lse~R~Mg~kpy~I~v~R-~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~-----GsciVnEaMLtGESvPl~K 315 (1160)
T KOG0209|consen 242 LSEFRTMGNKPYTINVYR-NKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLR-----GSCIVNEAMLTGESVPLMK 315 (1160)
T ss_pred HHHHHhcCCCceEEEEEe-cCcceeccccccCCCceEEeccCcccCcCCceEEEEe-----cceeechhhhcCCCccccc
Confidence 4 4443 56788999 9999999999999999999998 678999999999 9999999999999999999
Q ss_pred ccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceee-cCCeEEEEEEEecCccc--
Q 002392 204 RSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLK-NTDYVYGVVVFTGHDTK-- 280 (928)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~-~t~~~~gvVv~tG~~Tk-- 280 (928)
.++.... .+. .+..+..++.+..|.||.+++-..- .-+.++ -.+-++|.|++||.+|.
T Consensus 316 E~Ie~~~----~d~------~ld~~~d~k~hVlfGGTkivQht~p---------~~~slk~pDggc~a~VlrTGFeTSQG 376 (1160)
T KOG0209|consen 316 ESIELRD----SDD------ILDIDRDDKLHVLFGGTKIVQHTPP---------KKASLKTPDGGCVAYVLRTGFETSQG 376 (1160)
T ss_pred cccccCC----hhh------hcccccccceEEEEcCceEEEecCC---------ccccccCCCCCeEEEEEeccccccCC
Confidence 9987552 111 2233444567788999998853200 001111 13448999999999994
Q ss_pred -eeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHH
Q 002392 281 -VMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFL 359 (928)
Q Consensus 281 -i~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 359 (928)
+++-......+-+.- |+-..++++++++++++.+ +++|.....+ +..+.. .
T Consensus 377 kLvRtilf~aervTaN----n~Etf~FILFLlVFAiaAa--~Yvwv~Gskd-------------------~~RsrY---K 428 (1160)
T KOG0209|consen 377 KLVRTILFSAERVTAN----NRETFIFILFLLVFAIAAA--GYVWVEGSKD-------------------PTRSRY---K 428 (1160)
T ss_pred ceeeeEEecceeeeec----cHHHHHHHHHHHHHHHHhh--heEEEecccC-------------------cchhhh---h
Confidence 333222222332322 2223333444444444443 3333322111 111111 1
Q ss_pred HHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEE
Q 002392 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFV 439 (928)
Q Consensus 360 ~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~ 439 (928)
.|+-+..++...+|.-||+-++++-.-+...+ ++.++.|..+=.+.-.|+||.+|||||||||+..|.|.
T Consensus 429 L~LeC~LIlTSVvPpELPmELSmAVNsSL~AL----------ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~ 498 (1160)
T KOG0209|consen 429 LFLECTLILTSVVPPELPMELSMAVNSSLIAL----------AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVE 498 (1160)
T ss_pred eeeeeeEEEeccCCCCCchhhhHHHHHHHHHH----------HHhceeecCccccccCCceeEEEecCCCccccccEEEE
Confidence 56778888999999999998888766665555 78899999999999999999999999999999999999
Q ss_pred EEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHH
Q 002392 440 KCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFF 519 (928)
Q Consensus 440 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 519 (928)
++.-....-+. -.+-++.-.+-.
T Consensus 499 Gvag~~~~~~~---------------------------------------------------------~~~~s~~p~~t~ 521 (1160)
T KOG0209|consen 499 GVAGLSADEGA---------------------------------------------------------LTPASKAPNETV 521 (1160)
T ss_pred ecccccCCccc---------------------------------------------------------ccchhhCCchHH
Confidence 87421110000 000001112457
Q ss_pred HHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCc
Q 002392 520 RVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSR 599 (928)
Q Consensus 520 ~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~r 599 (928)
.++|.||+.....++ ..++|.|+|.+++ .|+.+...+ .+..+ ++.....+|.+.+.|+|..
T Consensus 522 ~vlAscHsLv~le~~-------lVGDPlEKA~l~~---v~W~~~k~~--~v~p~-------~~~~~~lkI~~ryhFsSaL 582 (1160)
T KOG0209|consen 522 LVLASCHSLVLLEDK-------LVGDPLEKATLEA---VGWNLEKKN--SVCPR-------EGNGKKLKIIQRYHFSSAL 582 (1160)
T ss_pred HHHHHHHHHHHhcCc-------ccCChHHHHHHHh---cCcccccCc--ccCCC-------cCCCcccchhhhhhHHHHH
Confidence 899999999775543 3479999999986 555554322 11111 1112367889999999999
Q ss_pred ceeEEEEEcCC----CcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHH
Q 002392 600 KRMSVMVRNPE----NQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLK 675 (928)
Q Consensus 600 krmsviv~~~~----~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~ 675 (928)
|||||+++..+ -++++.+|||||+|.+++.. .+.++.+...+|+++|.|||+++||.+.+---+
T Consensus 583 KRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d----vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~-------- 650 (1160)
T KOG0209|consen 583 KRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD----VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVS-------- 650 (1160)
T ss_pred HHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh----CchhHHHHHHHHhhccceEEEEecccccccchh--------
Confidence 99999988743 36889999999999999875 567788888999999999999999999842111
Q ss_pred HhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCce
Q 002392 676 AKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMK 755 (928)
Q Consensus 676 a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~ 755 (928)
+.-+..++.+|+||+|.|++.|..|+|++++++|+.|.+++++++|+|||++.||.++|+++||......
T Consensus 651 ----------q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~ 720 (1160)
T KOG0209|consen 651 ----------QVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTL 720 (1160)
T ss_pred ----------hhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCce
Confidence 1112234789999999999999999999999999999999999999999999999999999999877655
Q ss_pred EEEEcCCCchh-hHhh-hhc-chhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHH-HHHHHHh
Q 002392 756 QIVITLDSPDM-EALE-KQG-DKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKL-EKMFLDL 831 (928)
Q Consensus 756 ~~~i~~~~~~~-~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~-~~~~~~~ 831 (928)
++......... ..+. .++ ....+.... ....-...+.+.++|..++.+...+. ...+.
T Consensus 721 vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~----------------~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~-- 782 (1160)
T KOG0209|consen 721 VLDLPEEGDGNQLEWVSVDGTIVLPLKPGK----------------KKTLLAETHDLCITGSALDHLQATDQLRRLIP-- 782 (1160)
T ss_pred eeccCccCCCceeeEecCCCceeecCCCCc----------------cchhhhhhhhhhcchhHHHHHhhhHHHHHhhh--
Confidence 55543332110 0000 000 000000000 00001234567999999998876542 22222
Q ss_pred hccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecC
Q 002392 832 AIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISG 886 (928)
Q Consensus 832 ~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g 886 (928)
+.-||||+.|.||..++..++..|+.++|||||.||++||++||||||+-+
T Consensus 783 ----hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~ 833 (1160)
T KOG0209|consen 783 ----HVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLN 833 (1160)
T ss_pred ----heeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhc
Confidence 235999999999999999999999999999999999999999999999843
No 24
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=4.6e-66 Score=601.88 Aligned_cols=461 Identities=33% Similarity=0.471 Sum_probs=384.6
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHhhhhHHHhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCce
Q 002392 107 LAPLIVVIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGI 186 (928)
Q Consensus 107 ~~~l~~vl~i~~~~~~~~~~~r~~~~~~~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~ 186 (928)
++++++.++....+...++..+...++.+++++++|+| +| ++.|++++|+|||+|.|++||.|||||+|++ |.
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r-~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~-----g~ 76 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLR-NG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLS-----GS 76 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEE-CC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEE-----cc
Confidence 44555555555555556666655555557889999999 88 9999999999999999999999999999999 77
Q ss_pred EEEEeccCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCC
Q 002392 187 CYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTD 266 (928)
Q Consensus 187 ~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~ 266 (928)
|.||||+|||||.|+.|.+++.. |+|+.+.+|.
T Consensus 77 ~~vdes~LTGEs~pv~k~~g~~v---------------------------~~gs~~~~G~-------------------- 109 (499)
T TIGR01494 77 CFVDESNLTGESVPVLKTAGDAV---------------------------FAGTYVFNGT-------------------- 109 (499)
T ss_pred EEEEcccccCCCCCeeeccCCcc---------------------------ccCcEEeccE--------------------
Confidence 99999999999999999987654 8899999998
Q ss_pred eEEEEEEEecCccce---eecCCCCCCcccHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCC
Q 002392 267 YVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIV-YLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPD 342 (928)
Q Consensus 267 ~~~gvVv~tG~~Tki---~~~~~~~~~k~s~~~~~~~~~~-~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~ 342 (928)
+...|..+|.+|.. ..........+++++++.+++. .++++++++++++.+++|..+.... .
T Consensus 110 -~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~------~------- 175 (499)
T TIGR01494 110 -LIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDP------N------- 175 (499)
T ss_pred -EEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc------c-------
Confidence 88899999999853 3333444555788999999998 6777777777776666554321100 0
Q ss_pred CCCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeE
Q 002392 343 DATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDT 422 (928)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~ 422 (928)
.+...+.+++.+++.+|||+|+++++++...+..++ +++++++|+++.+|+||++++
T Consensus 176 -------------~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~----------~~~gilvk~~~~lE~l~~v~~ 232 (499)
T TIGR01494 176 -------------SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARL----------AKKGIVVRSLNALEELGKVDY 232 (499)
T ss_pred -------------cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH----------HHCCcEEechhhhhhccCCcE
Confidence 123478899999999999999999999999998887 788999999999999999999
Q ss_pred EEecCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhh
Q 002392 423 ILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIM 502 (928)
Q Consensus 423 i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 502 (928)
+|||||||||+|+|+|.++++.+.
T Consensus 233 i~fDKTGTLT~~~~~v~~~~~~~~-------------------------------------------------------- 256 (499)
T TIGR01494 233 ICSDKTGTLTKNEMSFKKVSVLGG-------------------------------------------------------- 256 (499)
T ss_pred EEeeCCCccccCceEEEEEEecCC--------------------------------------------------------
Confidence 999999999999999998864321
Q ss_pred cccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccc
Q 002392 503 NGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQK 582 (928)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 582 (928)
++.++||+|.|++++++..+
T Consensus 257 -------------------------------------~~~s~hp~~~ai~~~~~~~~----------------------- 276 (499)
T TIGR01494 257 -------------------------------------EYLSGHPDERALVKSAKWKI----------------------- 276 (499)
T ss_pred -------------------------------------CcCCCChHHHHHHHHhhhcC-----------------------
Confidence 01246999999999886411
Q ss_pred cceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccC
Q 002392 583 VNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELG 662 (928)
Q Consensus 583 ~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~ 662 (928)
+...||++.+++|+++++.+++ .|+||+++.|.+.|.. +.+.++.++.+|+|++++|++
T Consensus 277 -------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------~~~~~~~~~~~g~~~~~~a~~--- 335 (499)
T TIGR01494 277 -------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------LEEKVKELAQSGLRVLAVASK--- 335 (499)
T ss_pred -------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------HHHHHHHHHhCCCEEEEEEEC---
Confidence 2357999999999999987443 4789999999988752 233455678899999999952
Q ss_pred HHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHH
Q 002392 663 EDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAIN 742 (928)
Q Consensus 663 ~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ 742 (928)
-+++|+++++|++|++++++|+.|+++|+++||+|||+..+|..
T Consensus 336 ------------------------------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ 379 (499)
T TIGR01494 336 ------------------------------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKA 379 (499)
T ss_pred ------------------------------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHH
Confidence 36999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHH
Q 002392 743 IGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK 822 (928)
Q Consensus 743 ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~ 822 (928)
+|+++|+
T Consensus 380 ia~~lgi------------------------------------------------------------------------- 386 (499)
T TIGR01494 380 IAKELGI------------------------------------------------------------------------- 386 (499)
T ss_pred HHHHcCc-------------------------------------------------------------------------
Confidence 9999885
Q ss_pred HHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 823 KLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 823 ~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
+++++|++|..+++.++..|+.|+|+|||.||++||+.|||||+|+ |+++||+++++
T Consensus 387 -----------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~ 443 (499)
T TIGR01494 387 -----------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLD 443 (499)
T ss_pred -----------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEec
Confidence 3478899999999999888999999999999999999999999995 68899999997
Q ss_pred ccc--chhhhhhhchhhhhhcccccccC
Q 002392 903 FRF--LERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 903 f~~--l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
++. +..+ +.+||..++++++++.|+
T Consensus 444 ~~l~~i~~~-~~~~r~~~~~i~~~~~~~ 470 (499)
T TIGR01494 444 DNLSTIVDA-LKEGRKTFSTIKSNIFWA 470 (499)
T ss_pred CCHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 443 6666 999999999999998763
No 25
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-66 Score=600.02 Aligned_cols=480 Identities=22% Similarity=0.285 Sum_probs=388.6
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHhhh---hHHH---hcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEee
Q 002392 107 LAPLIVVIGATMAKEGVEDWRRRKQ---DIEA---NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180 (928)
Q Consensus 107 ~~~l~~vl~i~~~~~~~~~~~r~~~---~~~~---n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~s 180 (928)
...+++++.+. +++|++-+.++ .+.+ .++++++++.||++++|+.++|+|||+|.|++||+||+||+|++
T Consensus 177 aa~ii~l~~~G---~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~- 252 (713)
T COG2217 177 AAMLIFLFLLG---RYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS- 252 (713)
T ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe-
Confidence 33344444444 55555555554 3333 48899888756669999999999999999999999999999999
Q ss_pred eCCCceEEEEeccCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCc
Q 002392 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDS 260 (928)
Q Consensus 181 s~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs 260 (928)
|...||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 253 ----G~s~vDeS~iTGEs~PV~k~~Gd~V---------------------------~aGtiN~~G~-------------- 287 (713)
T COG2217 253 ----GSSSVDESMLTGESLPVEKKPGDEV---------------------------FAGTVNLDGS-------------- 287 (713)
T ss_pred ----CcEEeecchhhCCCCCEecCCCCEE---------------------------eeeEEECCcc--------------
Confidence 8899999999999999999999877 9999999998
Q ss_pred eeecCCeEEEEEEEecCccc---eeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCccccc
Q 002392 261 KLKNTDYVYGVVVFTGHDTK---VMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRW 337 (928)
Q Consensus 261 ~l~~t~~~~gvVv~tG~~Tk---i~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w 337 (928)
+...|..+|.||. +...+++++..++|+|+..|++..++.+++++++++.+++|.++... +|
T Consensus 288 -------l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~--------~~ 352 (713)
T COG2217 288 -------LTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGG--------DW 352 (713)
T ss_pred -------EEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC--------cH
Confidence 9999999999995 46667889999999999999999999999999988888766544320 12
Q ss_pred ccCCCCCCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhc
Q 002392 338 YLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEEL 417 (928)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~L 417 (928)
...+.+++.+|+.+|||+|.++.+++...+..+. +++|+++|+...+|.|
T Consensus 353 --------------------~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~a----------A~~GILiK~g~~LE~l 402 (713)
T COG2217 353 --------------------ETALYRALAVLVIACPCALGLATPTAILVGIGRA----------ARRGILIKGGEALERL 402 (713)
T ss_pred --------------------HHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHH----------HhCceEEeChHHHHhh
Confidence 2268899999999999999999999999999888 9999999999999999
Q ss_pred cceeEEEecCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCcccc
Q 002392 418 GQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFR 497 (928)
Q Consensus 418 g~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (928)
+++|+|+||||||||+|+|++..+...+. + .
T Consensus 403 ~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~--e--------------------------------------------- 433 (713)
T COG2217 403 AKVDTVVFDKTGTLTEGKPEVTDVVALDG--D--E--------------------------------------------- 433 (713)
T ss_pred ccCCEEEEeCCCCCcCCceEEEEEecCCC--C--H---------------------------------------------
Confidence 99999999999999999999998864332 0 0
Q ss_pred chhhhcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCC
Q 002392 498 DERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDP 577 (928)
Q Consensus 498 ~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~ 577 (928)
.+++...+ ..+..++||..+|++++|+..|..-.. . ...
T Consensus 434 ------------------~~~L~laA--------------alE~~S~HPiA~AIv~~a~~~~~~~~~----~-----~~~ 472 (713)
T COG2217 434 ------------------DELLALAA--------------ALEQHSEHPLAKAIVKAAAERGLPDVE----D-----FEE 472 (713)
T ss_pred ------------------HHHHHHHH--------------HHHhcCCChHHHHHHHHHHhcCCCCcc----c-----eee
Confidence 02222222 123346899999999999987621111 0 111
Q ss_pred CcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEE
Q 002392 578 VSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIA 657 (928)
Q Consensus 578 ~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A 657 (928)
.+|+|.+.. - +|+ .+.-|++..+.+.-. .... .....+.+..+|..++.++
T Consensus 473 i~G~Gv~~~---------------------v-~g~--~v~vG~~~~~~~~~~----~~~~-~~~~~~~~~~~G~t~v~va 523 (713)
T COG2217 473 IPGRGVEAE---------------------V-DGE--RVLVGNARLLGEEGI----DLPL-LSERIEALESEGKTVVFVA 523 (713)
T ss_pred eccCcEEEE---------------------E-CCE--EEEEcCHHHHhhcCC----Cccc-hhhhHHHHHhcCCeEEEEE
Confidence 122222221 1 332 233388866643211 1111 4556778888999988888
Q ss_pred EEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcH
Q 002392 658 YRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKM 737 (928)
Q Consensus 658 ~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~ 737 (928)
.|.+++|+++++|++|++++++|++|++.||++.|+|||+.
T Consensus 524 ---------------------------------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~ 564 (713)
T COG2217 524 ---------------------------------------VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNR 564 (713)
T ss_pred ---------------------------------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCH
Confidence 57799999999999999999999999999999999999999
Q ss_pred hhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhh
Q 002392 738 ETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLD 817 (928)
Q Consensus 738 ~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~ 817 (928)
.+|..+|+++||.
T Consensus 565 ~~A~~iA~~lGId------------------------------------------------------------------- 577 (713)
T COG2217 565 RTAEAIAKELGID------------------------------------------------------------------- 577 (713)
T ss_pred HHHHHHHHHcChH-------------------------------------------------------------------
Confidence 9999999999993
Q ss_pred HHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec-CCcchhhhhcC
Q 002392 818 FALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSS 896 (928)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~-g~e~~~ak~aA 896 (928)
.+.+.+.|++|.++|+.++..|+.|+|+|||.||.|+|..|||||||+ |++. |+++|
T Consensus 578 --------------------~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDv--A~eaA 635 (713)
T COG2217 578 --------------------EVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDV--AIEAA 635 (713)
T ss_pred --------------------hheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHH--HHHhC
Confidence 178899999999999999989999999999999999999999999995 5777 99999
Q ss_pred cEeecc--cccchhhhhhhchhhhhhcccccccC
Q 002392 897 DYAIAQ--FRFLERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 897 D~vi~~--f~~l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
|+++++ .+.+..+ +..+|..+++|++++.|+
T Consensus 636 DvvL~~~dL~~v~~a-i~lsr~t~~~IkqNl~~A 668 (713)
T COG2217 636 DVVLMRDDLSAVPEA-IDLSRATRRIIKQNLFWA 668 (713)
T ss_pred CEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 999996 5668888 899999999999998874
No 26
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-65 Score=550.09 Aligned_cols=595 Identities=19% Similarity=0.223 Sum_probs=459.3
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc-CCCC--CCchhhHHHHHHHHHHHhHHHHH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LAPY--SAPSVLAPLIVVIGATMAKEGVE 124 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~-~~~~--~~~~~~~~l~~vl~i~~~~~~~~ 124 (928)
.++|++.||.|+....|-+.+ +.|+..|..|..|..-.++++.... -... -.|..+.-++.+++++....+++
T Consensus 42 ~~eRlk~fG~NkleEkken~~----lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~DF~gI~~LLliNsti~Fve 117 (942)
T KOG0205|consen 42 VEERLKIFGPNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVGICCLLLINSTISFIE 117 (942)
T ss_pred HHHHHHhhCchhhhhhhhhHH----HHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhheeeeecceeeeee
Confidence 468899999999999888777 5677788899999999999988764 1111 13344455666777888888999
Q ss_pred HHHHhhhhHHHh---cceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccce
Q 002392 125 DWRRRKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLK 201 (928)
Q Consensus 125 ~~~r~~~~~~~n---~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~ 201 (928)
+++.-..-.++- ..++.|+| ||+|.+++++.|||||||.++.|++||||++||... .+.||+|.|||||-|+
T Consensus 118 E~nAGn~aa~L~a~LA~KakVlR-DGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD----~LkiDQSAlTGESLpv 192 (942)
T KOG0205|consen 118 ENNAGNAAAALMAGLAPKAKVLR-DGKWSEQEASILVPGDILSIKLGDIIPADARLLEGD----PLKIDQSALTGESLPV 192 (942)
T ss_pred ccccchHHHHHHhccCcccEEee-cCeeeeeeccccccCceeeeccCCEecCccceecCC----ccccchhhhcCCcccc
Confidence 998877644443 67899999 999999999999999999999999999999999955 3899999999999999
Q ss_pred eeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccce
Q 002392 202 LKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV 281 (928)
Q Consensus 202 ~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki 281 (928)
.|.+++.+ |+|+.+..|+ +.+||+.||..|..
T Consensus 193 tKh~gd~v---------------------------fSgSTcKqGE---------------------~eaVViATg~~TF~ 224 (942)
T KOG0205|consen 193 TKHPGDEV---------------------------FSGSTCKQGE---------------------IEAVVIATGVHTFF 224 (942)
T ss_pred ccCCCCce---------------------------ecccccccce---------------------EEEEEEEeccceee
Confidence 99999887 9999999998 99999999999965
Q ss_pred eecC--CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHH
Q 002392 282 MQNA--TDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFL 359 (928)
Q Consensus 282 ~~~~--~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 359 (928)
++-. -.+....+++++.++-+..++++.+. +.+++-+...++.... -| . .
T Consensus 225 GkAA~LVdst~~~GHFqkVLt~IGn~ci~si~-~g~lie~~vmy~~q~R--------~~-----------------r--~ 276 (942)
T KOG0205|consen 225 GKAAHLVDSTNQVGHFQKVLTGIGNFCICSIA-LGMLIEITVMYPIQHR--------LY-----------------R--D 276 (942)
T ss_pred hhhHHhhcCCCCcccHHHHHHhhhhHHHHHHH-HHHHHHHHhhhhhhhh--------hh-----------------h--h
Confidence 4332 12256779999999999888755432 3333322222222111 00 0 0
Q ss_pred HHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEE
Q 002392 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFV 439 (928)
Q Consensus 360 ~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~ 439 (928)
.+-+.+.+++.-||+++|..+++..++++.++ ++++++++...++|+|+.+|++|+|||||||.|++++.
T Consensus 277 ~i~nLlvllIGgiPiamPtVlsvTMAiGs~rL----------aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvd 346 (942)
T KOG0205|consen 277 GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVD 346 (942)
T ss_pred hhhheheeeecccccccceeeeehhhHHHHHH----------HhcccHHHHHHHHHHhhCceEEeecCcCceeecceecC
Confidence 22233445556699999999999999999999 89999999999999999999999999999999999986
Q ss_pred E----EEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHH
Q 002392 440 K----CSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVI 515 (928)
Q Consensus 440 ~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 515 (928)
+ ++..|.. ++
T Consensus 347 knl~ev~v~gv~----------------------------------------------------------------~D-- 360 (942)
T KOG0205|consen 347 KNLIEVFVKGVD----------------------------------------------------------------KD-- 360 (942)
T ss_pred cCcceeeecCCC----------------------------------------------------------------hH--
Confidence 5 2222211 00
Q ss_pred HHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecc
Q 002392 516 QKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEF 595 (928)
Q Consensus 516 ~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F 595 (928)
+++...+... .. .+.+..+.|++...+.- +..+..|+.++.+||
T Consensus 361 -~~~L~A~rAs--r~-----------en~DAID~A~v~~L~dP----------------------Keara~ikevhF~PF 404 (942)
T KOG0205|consen 361 -DVLLTAARAS--RK-----------ENQDAIDAAIVGMLADP----------------------KEARAGIKEVHFLPF 404 (942)
T ss_pred -HHHHHHHHHh--hh-----------cChhhHHHHHHHhhcCH----------------------HHHhhCceEEeeccC
Confidence 1222222221 11 13578889998765431 112467899999999
Q ss_pred cCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHH
Q 002392 596 TSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLK 675 (928)
Q Consensus 596 ~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~ 675 (928)
++..||-...+.+++|+....+||||+.|++.|... .+.++.....+++|+.+|+|.|++|++..++..-
T Consensus 405 nPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~-~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~--------- 474 (942)
T KOG0205|consen 405 NPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNED-HDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK--------- 474 (942)
T ss_pred CccccceEEEEECCCCCEEEecCCChHHHHHHhhcc-CcchHHHHHHHHHHHHhcchhhhhhhhccccccc---------
Confidence 999999999999999999999999999999999874 4678899999999999999999999998876420
Q ss_pred HhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCce
Q 002392 676 AKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMK 755 (928)
Q Consensus 676 a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~ 755 (928)
+.-..-.+|+|+.-+-||+|.++.++|......|..|-|+|||...-+...++.+|+-.+-.+
T Consensus 475 -----------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyp 537 (942)
T KOG0205|consen 475 -----------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP 537 (942)
T ss_pred -----------------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCC
Confidence 111245889999999999999999999999999999999999999999999999998543211
Q ss_pred ---EEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhh
Q 002392 756 ---QIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLA 832 (928)
Q Consensus 756 ---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~ 832 (928)
....+.++ .+.|...+...+
T Consensus 538 ss~llG~~~~~----------------------------------------------~~~~~~v~elie----------- 560 (942)
T KOG0205|consen 538 SSALLGLGKDG----------------------------------------------SMPGSPVDELIE----------- 560 (942)
T ss_pred chhhccCCCCC----------------------------------------------CCCCCcHHHHhh-----------
Confidence 00000000 001111111110
Q ss_pred ccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc--cccchhhh
Q 002392 833 IDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLL 910 (928)
Q Consensus 833 ~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~--f~~l~~ll 910 (928)
+..=|+.+.|+||..+|+.++..++.|.|.|||.||.|+|+.||+||++.++... |..+||+|+.. .+-+...
T Consensus 561 ---~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atda-ar~asdiVltepglSviI~a- 635 (942)
T KOG0205|consen 561 ---KADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDA-ARSASDIVLTEPGLSVIISA- 635 (942)
T ss_pred ---hccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhh-hcccccEEEcCCCchhhHHH-
Confidence 1235888999999999999999999999999999999999999999999765443 88899999997 4456666
Q ss_pred hhhchhhhhhcccccccC
Q 002392 911 LVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 911 l~~Gr~~~~~i~~~i~y~ 928 (928)
+..+|.+|+|++.+..|.
T Consensus 636 vltSraIfqrmknytiya 653 (942)
T KOG0205|consen 636 VLTSRAIFQRMKNYTIYA 653 (942)
T ss_pred HHHHHHHHHHHhhheeee
Confidence 789999999999988774
No 27
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=1.6e-62 Score=589.54 Aligned_cols=478 Identities=21% Similarity=0.221 Sum_probs=377.1
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhhhhHH---HhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCC
Q 002392 108 APLIVVIGATMAKEGVEDWRRRKQDIE---ANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYED 184 (928)
Q Consensus 108 ~~l~~vl~i~~~~~~~~~~~r~~~~~~---~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~ 184 (928)
..+++++.+....+.+...|.++..+. +.+.+++|+| ||++++|++++|+|||+|+|++||+|||||+|++
T Consensus 210 ~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir-~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~----- 283 (741)
T PRK11033 210 AMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLR-DGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS----- 283 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEE-CCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE-----
Confidence 334444444444444444444444333 3478999999 9999999999999999999999999999999999
Q ss_pred ceEEEEeccCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeec
Q 002392 185 GICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKN 264 (928)
Q Consensus 185 G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~ 264 (928)
|.+.||||.|||||.|+.|.+++.. |+||++++|.
T Consensus 284 g~~~vdes~lTGEs~Pv~k~~Gd~V---------------------------~aGt~~~~G~------------------ 318 (741)
T PRK11033 284 PFASFDESALTGESIPVERATGEKV---------------------------PAGATSVDRL------------------ 318 (741)
T ss_pred CcEEeecccccCCCCCEecCCCCee---------------------------ccCCEEcCce------------------
Confidence 7799999999999999999988755 9999999998
Q ss_pred CCeEEEEEEEecCccce---eecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCC
Q 002392 265 TDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQP 341 (928)
Q Consensus 265 t~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~ 341 (928)
+.+.|+.+|.+|.+ .....+++.+++|+|+.+++++.++.+++++++++.+++|.++... +|
T Consensus 319 ---~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~--------~~---- 383 (741)
T PRK11033 319 ---VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAA--------PW---- 383 (741)
T ss_pred ---EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC--------CH----
Confidence 99999999999954 5555677788999999999999999999999999888776432210 12
Q ss_pred CCCCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhcccee
Q 002392 342 DDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVD 421 (928)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~ 421 (928)
...+.+++.+++.+|||+|.++.+++...+.... +++|+++|+.+.+|.|++++
T Consensus 384 ----------------~~~i~~a~svlviacPcaL~latP~a~~~~l~~a----------ar~gilik~~~alE~l~~v~ 437 (741)
T PRK11033 384 ----------------QEWIYRGLTLLLIGCPCALVISTPAAITSGLAAA----------ARRGALIKGGAALEQLGRVT 437 (741)
T ss_pred ----------------HHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHH----------HHCCeEEcCcHHHHHhhCCC
Confidence 1146678899999999999999988888887776 88999999999999999999
Q ss_pred EEEecCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhh
Q 002392 422 TILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERI 501 (928)
Q Consensus 422 ~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 501 (928)
+||||||||||+|+|++.++...+.. .
T Consensus 438 ~v~fDKTGTLT~g~~~v~~~~~~~~~-~---------------------------------------------------- 464 (741)
T PRK11033 438 TVAFDKTGTLTEGKPQVTDIHPATGI-S---------------------------------------------------- 464 (741)
T ss_pred EEEEeCCCCCcCCceEEEEEEecCCC-C----------------------------------------------------
Confidence 99999999999999999987643210 0
Q ss_pred hcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCccc
Q 002392 502 MNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQ 581 (928)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~ 581 (928)
. .+++...+.. +..+.||.+.|+++++++.|+.
T Consensus 465 ----------~---~~~l~~aa~~--------------e~~s~hPia~Ai~~~a~~~~~~-------------------- 497 (741)
T PRK11033 465 ----------E---SELLALAAAV--------------EQGSTHPLAQAIVREAQVRGLA-------------------- 497 (741)
T ss_pred ----------H---HHHHHHHHHH--------------hcCCCCHHHHHHHHHHHhcCCC--------------------
Confidence 0 0222222211 1124799999999999876542
Q ss_pred ccceEEEEeEeecccCCcceeEE-EEE-cCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEE
Q 002392 582 KVNRVYELLHVLEFTSSRKRMSV-MVR-NPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYR 659 (928)
Q Consensus 582 ~~~~~~~il~~~~F~s~rkrmsv-iv~-~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k 659 (928)
+||.++++.+.- -++ .-+|..+. -|+++.+.+ . .+.....++.+..+|+|++++|
T Consensus 498 -----------~~~~~~~~~~~g~Gv~~~~~g~~~~--ig~~~~~~~-~-------~~~~~~~~~~~~~~g~~~v~va-- 554 (741)
T PRK11033 498 -----------IPEAESQRALAGSGIEGQVNGERVL--ICAPGKLPP-L-------ADAFAGQINELESAGKTVVLVL-- 554 (741)
T ss_pred -----------CCCCcceEEEeeEEEEEEECCEEEE--Eecchhhhh-c-------cHHHHHHHHHHHhCCCEEEEEE--
Confidence 234444444321 121 11344333 388877654 1 1234455678899999999999
Q ss_pred ccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhh
Q 002392 660 ELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (928)
Q Consensus 660 ~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~t 739 (928)
.|.+++|+++++|++|++++++|+.|++.|++++|+|||+..+
T Consensus 555 -------------------------------------~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~ 597 (741)
T PRK11033 555 -------------------------------------RNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRA 597 (741)
T ss_pred -------------------------------------ECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHH
Confidence 3678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHH
Q 002392 740 AINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFA 819 (928)
Q Consensus 740 a~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~ 819 (928)
|..+|+++||.
T Consensus 598 a~~ia~~lgi~--------------------------------------------------------------------- 608 (741)
T PRK11033 598 AAAIAGELGID--------------------------------------------------------------------- 608 (741)
T ss_pred HHHHHHHcCCC---------------------------------------------------------------------
Confidence 99999999993
Q ss_pred hHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEe
Q 002392 820 LDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYA 899 (928)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~v 899 (928)
.+++..|++|..+++.+++. ..|+|+|||.||.+||+.|||||+|++. ...++++||++
T Consensus 609 -------------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~-~~~a~~~adiv 667 (741)
T PRK11033 609 -------------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSG-TDVALETADAA 667 (741)
T ss_pred -------------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCC-CHHHHHhCCEE
Confidence 34467899999999999754 5899999999999999999999999633 23388999999
Q ss_pred ecc--cccchhhhhhhchhhhhhcccccccC
Q 002392 900 IAQ--FRFLERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 900 i~~--f~~l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
+.+ +..|..+ +..||..+++|++++.|+
T Consensus 668 l~~~~l~~l~~~-i~~sr~~~~~I~~nl~~a 697 (741)
T PRK11033 668 LTHNRLRGLAQM-IELSRATHANIRQNITIA 697 (741)
T ss_pred EecCCHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 985 5557777 899999999999998763
No 28
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-62 Score=551.59 Aligned_cols=502 Identities=21% Similarity=0.234 Sum_probs=394.7
Q ss_pred CchhhHHHHHHHHHHHhHHHHHHHHHhhh------hHHHhcceeEEEccCCe-EEEEeccccccCcEEEecCCcccCceE
Q 002392 103 APSVLAPLIVVIGATMAKEGVEDWRRRKQ------DIEANNRKVKVYGQDHT-FVETKWKNLRVGDLVKVHKDEYFPADL 175 (928)
Q Consensus 103 ~~~~~~~l~~vl~i~~~~~~~~~~~r~~~------~~~~n~~~~~v~r~~g~-~~~i~~~~L~vGDII~l~~ge~vPaD~ 175 (928)
+|.+...|+.++.+.- +.|..-++|+ +..+.+.++.++. +|+ .++|+.+.|++||+|+|.+|++||+||
T Consensus 340 fFdt~~MLi~fi~lgr---~LE~~Ak~kts~alskLmsl~p~~a~ii~-~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG 415 (951)
T KOG0207|consen 340 FFDTSPMLITFITLGR---WLESLAKGKTSEALSKLMSLAPSKATIIE-DGSEEKEIPVDLVQVGDIVKVKPGEKIPVDG 415 (951)
T ss_pred hccccHHHHHHHHHHH---HHHHHhhccchHHHHHHhhcCcccceEee-cCCcceEeeeeeeccCCEEEECCCCcccccc
Confidence 4444444444554444 4444444544 2333588999998 886 899999999999999999999999999
Q ss_pred EEEeeeCCCceEEEEeccCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccc
Q 002392 176 LLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQI 255 (928)
Q Consensus 176 ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~ 255 (928)
++++ |.++||||.+|||+.|+.|++++.. .+|+++.+|.
T Consensus 416 ~Vv~-----Gss~VDEs~iTGEs~PV~Kk~gs~V---------------------------iaGsiN~nG~--------- 454 (951)
T KOG0207|consen 416 VVVD-----GSSEVDESLITGESMPVPKKKGSTV---------------------------IAGSINLNGT--------- 454 (951)
T ss_pred EEEe-----CceeechhhccCCceecccCCCCee---------------------------eeeeecCCce---------
Confidence 9999 8899999999999999999998866 8999999998
Q ss_pred cccCceeecCCeEEEEEEEecCccc---eeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCC
Q 002392 256 LLRDSKLKNTDYVYGVVVFTGHDTK---VMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGG 332 (928)
Q Consensus 256 ~~rgs~l~~t~~~~gvVv~tG~~Tk---i~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~ 332 (928)
++.-++.+|.||. |.+..++++..++|+|+.+|+++.++.++++++++..+++|.+.....
T Consensus 455 ------------l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~---- 518 (951)
T KOG0207|consen 455 ------------LLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIV---- 518 (951)
T ss_pred ------------EEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHcccc----
Confidence 9999999999995 567778899999999999999999999999999999999988766533
Q ss_pred cccccccCCCCCCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeeccc
Q 002392 333 KIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSN 412 (928)
Q Consensus 333 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~ 412 (928)
.||.. .++..+...|..++.+++.+|||+|.++.+++.+.+...- +.+|+++|..+
T Consensus 519 ---~~~~~-----------~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvg----------A~nGvLIKGge 574 (951)
T KOG0207|consen 519 ---FKYPR-----------SFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVG----------ATNGVLIKGGE 574 (951)
T ss_pred ---ccCcc-----------hhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechh----------hhcceEEcCcH
Confidence 23211 1112345578899999999999999999998877766655 88999999999
Q ss_pred chhhccceeEEEecCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccC
Q 002392 413 LNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVK 492 (928)
Q Consensus 413 ~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (928)
.+|.+.+|++|.||||||||+|++.+.++.+.....
T Consensus 575 ~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~-------------------------------------------- 610 (951)
T KOG0207|consen 575 ALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPI-------------------------------------------- 610 (951)
T ss_pred HHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcc--------------------------------------------
Confidence 999999999999999999999999999887554320
Q ss_pred CccccchhhhcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEE
Q 002392 493 GFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISL 572 (928)
Q Consensus 493 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~ 572 (928)
..++++...+ ..+..++||...|+++||++.+- .++...+
T Consensus 611 ---------------------~~~e~l~~v~--------------a~Es~SeHPig~AIv~yak~~~~-----~~~~~~~ 650 (951)
T KOG0207|consen 611 ---------------------SLKEALALVA--------------AMESGSEHPIGKAIVDYAKEKLV-----EPNPEGV 650 (951)
T ss_pred ---------------------cHHHHHHHHH--------------HHhcCCcCchHHHHHHHHHhccc-----ccCcccc
Confidence 0112222222 12223579999999999998761 1111111
Q ss_pred EecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCe
Q 002392 573 HELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLR 652 (928)
Q Consensus 573 ~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr 652 (928)
......+|++ ....+.+. +.+ .+-|.-+-|.. ......+++...+++....|..
T Consensus 651 ~~~~~~pg~g-----------------~~~~~~~~--~~~---i~iGN~~~~~r----~~~~~~~~i~~~~~~~e~~g~t 704 (951)
T KOG0207|consen 651 LSFEYFPGEG-----------------IYVTVTVD--GNE---VLIGNKEWMSR----NGCSIPDDILDALTESERKGQT 704 (951)
T ss_pred ceeecccCCC-----------------cccceEEe--eeE---EeechHHHHHh----cCCCCchhHHHhhhhHhhcCce
Confidence 1111111221 11111111 122 22266544433 2223345677788888899999
Q ss_pred eeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEE
Q 002392 653 TLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVL 732 (928)
Q Consensus 653 ~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~il 732 (928)
+.++| -|.++.|+++++|++|+++..+|+.||+.||++.|+
T Consensus 705 vv~v~---------------------------------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mL 745 (951)
T KOG0207|consen 705 VVYVA---------------------------------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVML 745 (951)
T ss_pred EEEEE---------------------------------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEE
Confidence 99998 588999999999999999999999999999999999
Q ss_pred cCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEc
Q 002392 733 TGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVID 812 (928)
Q Consensus 733 TGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ 812 (928)
|||+..+|.++|+++|+-
T Consensus 746 TGDn~~aA~svA~~VGi~-------------------------------------------------------------- 763 (951)
T KOG0207|consen 746 TGDNDAAARSVAQQVGID-------------------------------------------------------------- 763 (951)
T ss_pred cCCCHHHHHHHHHhhCcc--------------------------------------------------------------
Confidence 999999999999999962
Q ss_pred cchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec-CCcchh
Q 002392 813 GKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQ 891 (928)
Q Consensus 813 g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~-g~e~~~ 891 (928)
.|+|...|+||.+.|+.+++.++.|+|+|||.||.|+|.+|||||+|+ |++.
T Consensus 764 -------------------------~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~v-- 816 (951)
T KOG0207|consen 764 -------------------------NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDV-- 816 (951)
T ss_pred -------------------------eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHH--
Confidence 389999999999999999999999999999999999999999999995 5566
Q ss_pred hhhcCcEeecc--cccchhhhhhhchhhhhhcccccccC
Q 002392 892 AVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 892 ak~aAD~vi~~--f~~l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
|.++||++++. .+.+... +..+|...+|++.++.|+
T Consensus 817 AieaADIVLmrn~L~~v~~a-i~LSrkt~~rIk~N~~~A 854 (951)
T KOG0207|consen 817 AIEAADIVLMRNDLRDVPFA-IDLSRKTVKRIKLNFVWA 854 (951)
T ss_pred HHhhCCEEEEccchhhhHHH-HHHHHHHHhhHHHHHHHH
Confidence 99999999996 4556666 889999999999988764
No 29
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=9.1e-61 Score=562.14 Aligned_cols=491 Identities=21% Similarity=0.232 Sum_probs=383.9
Q ss_pred CCchhhHHHHHHHHHHHhHHHHHHHHHhhhhHHH---hcceeEEEccCC-eEEEEeccccccCcEEEecCCcccCceEEE
Q 002392 102 SAPSVLAPLIVVIGATMAKEGVEDWRRRKQDIEA---NNRKVKVYGQDH-TFVETKWKNLRVGDLVKVHKDEYFPADLLL 177 (928)
Q Consensus 102 ~~~~~~~~l~~vl~i~~~~~~~~~~~r~~~~~~~---n~~~~~v~r~~g-~~~~i~~~~L~vGDII~l~~ge~vPaD~il 177 (928)
+.|.....++++++++...+.+.+++..+..+.+ ++.+++|+| +| +++++++++|+|||+|.|++||.|||||+|
T Consensus 16 ~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r-~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v 94 (556)
T TIGR01525 16 GLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQ-GDGSEEEVPVEELQVGDIVIVRPGERIPVDGVV 94 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEE-CCCeEEEEEHHHCCCCCEEEECCCCEeccceEE
Confidence 3445566666666666666666666655554444 467899999 74 999999999999999999999999999999
Q ss_pred EeeeCCCceEEEEeccCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccc
Q 002392 178 LSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILL 257 (928)
Q Consensus 178 L~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~ 257 (928)
++ |.+.||||.|||||.|+.|.+++.. |+||.+.+|.
T Consensus 95 i~-----g~~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~~g~----------- 131 (556)
T TIGR01525 95 IS-----GESEVDESALTGESMPVEKKEGDEV---------------------------FAGTINGDGS----------- 131 (556)
T ss_pred Ee-----cceEEeehhccCCCCCEecCCcCEE---------------------------eeceEECCce-----------
Confidence 99 7799999999999999999887544 9999999998
Q ss_pred cCceeecCCeEEEEEEEecCccceee---cCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcc
Q 002392 258 RDSKLKNTDYVYGVVVFTGHDTKVMQ---NATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKI 334 (928)
Q Consensus 258 rgs~l~~t~~~~gvVv~tG~~Tki~~---~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~ 334 (928)
+.++|+.||.+|++.+ ....++.+++++++.+++++.++.+++++++++.+++|.+...
T Consensus 132 ----------~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~-------- 193 (556)
T TIGR01525 132 ----------LTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA-------- 193 (556)
T ss_pred ----------EEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------
Confidence 9999999999997543 3445567789999999999999999888888888776543211
Q ss_pred cccccCCCCCCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccch
Q 002392 335 RRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLN 414 (928)
Q Consensus 335 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~ 414 (928)
| ..+.+++.+++..|||+|+++++++...+..++ .++++++|+++.+
T Consensus 194 --~---------------------~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~----------~~~gilvk~~~~l 240 (556)
T TIGR01525 194 --L---------------------GALYRALAVLVVACPCALGLATPVAILVAIGVA----------ARRGILIKGGDAL 240 (556)
T ss_pred --c---------------------hHHHHHHHHHhhccccchhehhHHHHHHHHHHH----------HHCCceecCchHH
Confidence 0 267889999999999999999999999999988 8999999999999
Q ss_pred hhccceeEEEecCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCc
Q 002392 415 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGF 494 (928)
Q Consensus 415 e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (928)
|.||+++++|||||||||+|+|++.++...+....
T Consensus 241 e~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~--------------------------------------------- 275 (556)
T TIGR01525 241 EKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDASI--------------------------------------------- 275 (556)
T ss_pred HHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCCc---------------------------------------------
Confidence 99999999999999999999999998864322100
Q ss_pred cccchhhhcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEe
Q 002392 495 NFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHE 574 (928)
Q Consensus 495 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~ 574 (928)
...+++.. |..+. ..+.||.+.|+++++++.|..... +.
T Consensus 276 -------------------~~~~~l~~---a~~~e-----------~~~~hp~~~Ai~~~~~~~~~~~~~--~~------ 314 (556)
T TIGR01525 276 -------------------SEEELLAL---AAALE-----------QSSSHPLARAIVRYAKKRGLELPK--QE------ 314 (556)
T ss_pred -------------------cHHHHHHH---HHHHh-----------ccCCChHHHHHHHHHHhcCCCccc--cc------
Confidence 00122222 22221 124699999999999987653211 00
Q ss_pred cCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeee
Q 002392 575 LDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTL 654 (928)
Q Consensus 575 ~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l 654 (928)
.+ ..+ ..+.+...+ +|. .-+..|+++.+ + .. . .........++.++.+|+|++
T Consensus 315 -----------~~---~~~----~~~gi~~~~---~g~-~~~~lg~~~~~-~-~~--~-~~~~~~~~~~~~~~~~g~~~~ 367 (556)
T TIGR01525 315 -----------DV---EEV----PGKGVEATV---DGQ-EEVRIGNPRLL-E-LA--A-EPISASPDLLNEGESQGKTVV 367 (556)
T ss_pred -----------Ce---eEe----cCCeEEEEE---CCe-eEEEEecHHHH-h-hc--C-CCchhhHHHHHHHhhCCcEEE
Confidence 00 000 011222222 221 12333776554 1 11 1 111223456677889999999
Q ss_pred EEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcC-CeEEEEc
Q 002392 655 VIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAG-IKVWVLT 733 (928)
Q Consensus 655 ~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aG-Ikv~ilT 733 (928)
.+| .|.+++|.+.++|+++|+++++|+.|+++| ++++|+|
T Consensus 368 ~v~---------------------------------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivT 408 (556)
T TIGR01525 368 FVA---------------------------------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLT 408 (556)
T ss_pred EEE---------------------------------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEe
Confidence 998 467999999999999999999999999999 9999999
Q ss_pred CCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEcc
Q 002392 734 GDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDG 813 (928)
Q Consensus 734 GD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g 813 (928)
||+..++..+++++|+.
T Consensus 409 gd~~~~a~~i~~~lgi~--------------------------------------------------------------- 425 (556)
T TIGR01525 409 GDNRSAAEAVAAELGID--------------------------------------------------------------- 425 (556)
T ss_pred CCCHHHHHHHHHHhCCC---------------------------------------------------------------
Confidence 99999999999999992
Q ss_pred chhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhh
Q 002392 814 KSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAV 893 (928)
Q Consensus 814 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak 893 (928)
.+++++.|++|..+++.++..+..|+|+|||.||++|++.||+||++++ ....++
T Consensus 426 ------------------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~-~~~~~~ 480 (556)
T TIGR01525 426 ------------------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGA-GSDVAI 480 (556)
T ss_pred ------------------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCC-CCHHHH
Confidence 1667888999999999998788899999999999999999999999964 233478
Q ss_pred hcCcEeecc--cccchhhhhhhchhhhhhcccccccC
Q 002392 894 MSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 894 ~aAD~vi~~--f~~l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
..||+++.+ +..+..+ +..||..++++++++.|+
T Consensus 481 ~~Ad~vi~~~~~~~l~~~-i~~~r~~~~~i~~nl~~a 516 (556)
T TIGR01525 481 EAADIVLLNDDLSSLPTA-IDLSRKTRRIIKQNLAWA 516 (556)
T ss_pred HhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 899999994 6668888 899999999999998763
No 30
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=1.4e-59 Score=549.87 Aligned_cols=475 Identities=22% Similarity=0.252 Sum_probs=373.5
Q ss_pred CchhhHHHHHHHHHHHhHHHHHHHHHhhhhHHH---hcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEe
Q 002392 103 APSVLAPLIVVIGATMAKEGVEDWRRRKQDIEA---NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLS 179 (928)
Q Consensus 103 ~~~~~~~l~~vl~i~~~~~~~~~~~r~~~~~~~---n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ 179 (928)
++.....+++++.++...|.+...+.++..+.+ .+.+++++|.+|.+++|+.++|+|||+|.|++||.|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 445555556666665555554444444443333 47889999845778999999999999999999999999999999
Q ss_pred eeCCCceEEEEeccCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccC
Q 002392 180 SIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRD 259 (928)
Q Consensus 180 ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rg 259 (928)
|.+.||||.|||||.|+.|.+++.. |+||++.+|.
T Consensus 133 -----g~~~vdes~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~g~------------- 167 (562)
T TIGR01511 133 -----GESEVDESLVTGESLPVPKKVGDPV---------------------------IAGTVNGTGS------------- 167 (562)
T ss_pred -----CceEEehHhhcCCCCcEEcCCCCEE---------------------------EeeeEECCce-------------
Confidence 8899999999999999999988755 9999999998
Q ss_pred ceeecCCeEEEEEEEecCccce---eecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccc
Q 002392 260 SKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRR 336 (928)
Q Consensus 260 s~l~~t~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~ 336 (928)
+.+.|+.||.+|.+ ......++.+++++++.+++++.++++++++++++.+++|.
T Consensus 168 --------~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~-------------- 225 (562)
T TIGR01511 168 --------LVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL-------------- 225 (562)
T ss_pred --------EEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------
Confidence 99999999999965 44455667788999999999999999888888877765542
Q ss_pred cccCCCCCCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhh
Q 002392 337 WYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEE 416 (928)
Q Consensus 337 w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~ 416 (928)
..+.+++.+++.+|||+|+++++++...+..++ +++|+++|+++.+|.
T Consensus 226 ----------------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~a----------a~~gIlik~~~~lE~ 273 (562)
T TIGR01511 226 ----------------------FALEFAVTVLIIACPCALGLATPTVIAVATGLA----------AKNGVLIKDGDALER 273 (562)
T ss_pred ----------------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH----------HHCCeEEcChHHHHH
Confidence 157788999999999999999999999999888 899999999999999
Q ss_pred ccceeEEEecCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccc
Q 002392 417 LGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNF 496 (928)
Q Consensus 417 Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (928)
|+++++||||||||||+|+|++..+...+...
T Consensus 274 l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~------------------------------------------------ 305 (562)
T TIGR01511 274 AANIDTVVFDKTGTLTQGKPTVTDVHVFGDRD------------------------------------------------ 305 (562)
T ss_pred hhCCCEEEECCCCCCcCCCEEEEEEecCCCCC------------------------------------------------
Confidence 99999999999999999999999875432100
Q ss_pred cchhhhcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecC
Q 002392 497 RDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELD 576 (928)
Q Consensus 497 ~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~ 576 (928)
. .+++..++ .+ +..+.||.+.|+++++++.|.....-
T Consensus 306 ---------------~---~~~l~~aa---~~-----------e~~s~HPia~Ai~~~~~~~~~~~~~~----------- 342 (562)
T TIGR01511 306 ---------------R---TELLALAA---AL-----------EAGSEHPLAKAIVSYAKEKGITLVEV----------- 342 (562)
T ss_pred ---------------H---HHHHHHHH---HH-----------hccCCChHHHHHHHHHHhcCCCcCCC-----------
Confidence 0 12222222 11 11246999999999998876532110
Q ss_pred CCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEE
Q 002392 577 PVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVI 656 (928)
Q Consensus 577 ~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~ 656 (928)
..++ .+ ..+.+...+ +|. -+..|+++.+.+. +.. +..+..+|.+++.+
T Consensus 343 --------~~~~---~~----~g~Gi~~~~---~g~--~~~iG~~~~~~~~----~~~--------~~~~~~~g~~~~~~ 390 (562)
T TIGR01511 343 --------SDFK---AI----PGIGVEGTV---EGT--KIQLGNEKLLGEN----AIK--------IDGKAEQGSTSVLV 390 (562)
T ss_pred --------CCeE---EE----CCceEEEEE---CCE--EEEEECHHHHHhC----CCC--------CChhhhCCCEEEEE
Confidence 0000 00 012222222 232 2345888765331 111 11245789998888
Q ss_pred EEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCc
Q 002392 657 AYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDK 736 (928)
Q Consensus 657 A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~ 736 (928)
+ .|.+++|+++++|++||+++++|+.|++.|++++|+|||+
T Consensus 391 ~---------------------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~ 431 (562)
T TIGR01511 391 A---------------------------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDN 431 (562)
T ss_pred E---------------------------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCC
Confidence 7 5789999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchh
Q 002392 737 METAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSL 816 (928)
Q Consensus 737 ~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l 816 (928)
..++..+++++|+.
T Consensus 432 ~~~a~~ia~~lgi~------------------------------------------------------------------ 445 (562)
T TIGR01511 432 RKTAKAVAKELGIN------------------------------------------------------------------ 445 (562)
T ss_pred HHHHHHHHHHcCCc------------------------------------------------------------------
Confidence 99999999999981
Q ss_pred hHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcC
Q 002392 817 DFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSS 896 (928)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aA 896 (928)
++++..|++|..+++.++..++.|+|+|||.||++|++.||+||+|+.. ...++.+|
T Consensus 446 ----------------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g-~~~a~~~A 502 (562)
T TIGR01511 446 ----------------------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAG-TDVAIEAA 502 (562)
T ss_pred ----------------------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCc-CHHHHhhC
Confidence 3456679999999999987889999999999999999999999999643 23378999
Q ss_pred cEeec--ccccchhhhhhhchhhhhhcccccccC
Q 002392 897 DYAIA--QFRFLERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 897 D~vi~--~f~~l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
|+++. +++.|..+ +..||..++++++++.|+
T Consensus 503 dvvl~~~~l~~l~~~-i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 503 DVVLMRNDLNDVATA-IDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred CEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 99998 56778888 999999999999988763
No 31
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=3.1e-59 Score=545.38 Aligned_cols=481 Identities=22% Similarity=0.252 Sum_probs=376.3
Q ss_pred HHHHHHHhcccCCCCCCchhhHHHHHHHHHHHhHHHHHHHHHhhhhHHH---hcceeEEEccCCeEEEEeccccccCcEE
Q 002392 87 FLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRKQDIEA---NNRKVKVYGQDHTFVETKWKNLRVGDLV 163 (928)
Q Consensus 87 ~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~r~~~~~~~---n~~~~~v~r~~g~~~~i~~~~L~vGDII 163 (928)
++++++++++. +.|.....++++++++...+.+.+++..+..+.+ ++.+++|+| +|+++.+++++|+|||+|
T Consensus 5 ~~~a~~~~~~~----~~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r-~g~~~~i~~~~l~~GDiv 79 (536)
T TIGR01512 5 MALAALGAVAI----GEYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLR-GGSLEEVAVEELKVGDVV 79 (536)
T ss_pred HHHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEE-CCEEEEEEHHHCCCCCEE
Confidence 34444444442 3344445566666666666666666655554433 578999999 999999999999999999
Q ss_pred EecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEE
Q 002392 164 KVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQY 243 (928)
Q Consensus 164 ~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~ 243 (928)
.|++||.|||||+|++ |.+.||||+|||||.|+.|.+++.. |+||.+.
T Consensus 80 ~v~~G~~iP~Dg~ii~-----g~~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~ 127 (536)
T TIGR01512 80 VVKPGERVPVDGVVLS-----GTSTVDESALTGESVPVEKAPGDEV---------------------------FAGAINL 127 (536)
T ss_pred EEcCCCEeecceEEEe-----CcEEEEecccCCCCCcEEeCCCCEE---------------------------EeeeEEC
Confidence 9999999999999999 7899999999999999999987644 9999999
Q ss_pred CCeEeecCcccccccCceeecCCeEEEEEEEecCcccee---ecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002392 244 EGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVM---QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVF 320 (928)
Q Consensus 244 ~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~---~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~ 320 (928)
+|. +.++|+.||.+|.+. .....++.+++++++.+++++.++.+++++++++.+++
T Consensus 128 ~G~---------------------~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (536)
T TIGR01512 128 DGV---------------------LTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLV 186 (536)
T ss_pred Cce---------------------EEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998 999999999999754 33445567789999999999999999888888777665
Q ss_pred HhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccc
Q 002392 321 FGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYE 400 (928)
Q Consensus 321 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~ 400 (928)
+.+.. .| ...+.+++.+++.+|||+|+++++++...+..++
T Consensus 187 ~~~~~----------~~--------------------~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~--------- 227 (536)
T TIGR01512 187 PGLLK----------RW--------------------PFWVYRALVLLVVASPCALVISAPAAYLSAISAA--------- 227 (536)
T ss_pred HHHhc----------cc--------------------HHHHHHHHHHHhhcCccccccchHHHHHHHHHHH---------
Confidence 54221 01 1157778899999999999999999999999888
Q ss_pred cCCCCceeecccchhhccceeEEEecCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCC
Q 002392 401 DTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGL 480 (928)
Q Consensus 401 ~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (928)
.++++++|+++.+|.||+++++|||||||||+|+|++.++...
T Consensus 228 -~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~------------------------------------ 270 (536)
T TIGR01512 228 -ARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA------------------------------------ 270 (536)
T ss_pred -HHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH------------------------------------
Confidence 8999999999999999999999999999999999999876410
Q ss_pred CCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCc
Q 002392 481 NGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGF 560 (928)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~ 560 (928)
+++...+.+. ..+.||.+.|+++++++.+
T Consensus 271 ------------------------------------~~l~~a~~~e--------------~~~~hp~~~Ai~~~~~~~~- 299 (536)
T TIGR01512 271 ------------------------------------EVLRLAAAAE--------------QASSHPLARAIVDYARKRE- 299 (536)
T ss_pred ------------------------------------HHHHHHHHHh--------------ccCCCcHHHHHHHHHHhcC-
Confidence 1222222111 1246999999999998754
Q ss_pred EEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHH
Q 002392 561 QFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETR 640 (928)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~ 640 (928)
.+ .. .+ .+| .+.+...+ +|..+ ..|+++.+.+. +
T Consensus 300 ~~-----~~-----------------~~---~~~----g~gi~~~~---~g~~~--~ig~~~~~~~~----~-------- 333 (536)
T TIGR01512 300 NV-----ES-----------------VE---EVP----GEGVRAVV---DGGEV--RIGNPRSLEAA----V-------- 333 (536)
T ss_pred CC-----cc-----------------eE---Eec----CCeEEEEE---CCeEE--EEcCHHHHhhc----C--------
Confidence 00 00 00 011 11122111 23322 23776544221 0
Q ss_pred HHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHH
Q 002392 641 RHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECID 720 (928)
Q Consensus 641 ~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~ 720 (928)
+..+..+|.+++.++ .|..++|.+.++|+++++++++|+
T Consensus 334 --~~~~~~~~~~~~~v~---------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~ 372 (536)
T TIGR01512 334 --GARPESAGKTIVHVA---------------------------------------RDGTYLGYILLSDEPRPDAAEAIA 372 (536)
T ss_pred --CcchhhCCCeEEEEE---------------------------------------ECCEEEEEEEEeccchHHHHHHHH
Confidence 114566788887776 578999999999999999999999
Q ss_pred HHHHcCC-eEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccc
Q 002392 721 KLAQAGI-KVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNS 799 (928)
Q Consensus 721 ~l~~aGI-kv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (928)
.|+++|+ +++|+|||+..++..+++++|+..
T Consensus 373 ~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~------------------------------------------------ 404 (536)
T TIGR01512 373 ELKALGIEKVVMLTGDRRAVAERVARELGIDE------------------------------------------------ 404 (536)
T ss_pred HHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh------------------------------------------------
Confidence 9999999 999999999999999999999931
Q ss_pred cccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCC
Q 002392 800 AKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEAD 879 (928)
Q Consensus 800 ~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~ 879 (928)
++++..|++|..+++.++..+..|+|+|||.||++|++.||
T Consensus 405 ---------------------------------------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~ 445 (536)
T TIGR01512 405 ---------------------------------------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAAD 445 (536)
T ss_pred ---------------------------------------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCC
Confidence 45677899999999999888899999999999999999999
Q ss_pred eeEEecCCcchhhhhcCcEeec--ccccchhhhhhhchhhhhhccccccc
Q 002392 880 IGVGISGVEGMQAVMSSDYAIA--QFRFLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 880 vGIam~g~e~~~ak~aAD~vi~--~f~~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
+||+++......++.+||+++. ++..|..+ +..||..++++++++.|
T Consensus 446 vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~-i~~~r~~~~~i~~nl~~ 494 (536)
T TIGR01512 446 VGIAMGASGSDVAIETADVVLLNDDLSRLPQA-IRLARRTRRIVKQNVVI 494 (536)
T ss_pred EEEEeCCCccHHHHHhCCEEEECCCHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9999962223338899999995 57778888 99999999999998876
No 32
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=3.8e-57 Score=554.87 Aligned_cols=472 Identities=18% Similarity=0.214 Sum_probs=373.2
Q ss_pred hHHHHHHHHHhhhhH---HH---hcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEec
Q 002392 119 AKEGVEDWRRRKQDI---EA---NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETM 192 (928)
Q Consensus 119 ~~~~~~~~~r~~~~~---~~---n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s 192 (928)
+-+++|.+-+.++.+ .+ .+.+++|+| +|.+++|+.++|+|||+|+|++||+|||||+|++ |.+.||||
T Consensus 298 ~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~-~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~-----g~~~vdeS 371 (834)
T PRK10671 298 LGHMLEARARQRSSKALEKLLDLTPPTARVVT-DEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQ-----GEAWLDEA 371 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe-CCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEE-----ceEEEeeh
Confidence 335555555554433 33 478899999 9999999999999999999999999999999999 88999999
Q ss_pred cCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEE
Q 002392 193 NLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVV 272 (928)
Q Consensus 193 ~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvV 272 (928)
.|||||.|+.|.+++.. |+||++.+|. +.+.|
T Consensus 372 ~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~G~---------------------~~~~v 403 (834)
T PRK10671 372 MLTGEPIPQQKGEGDSV---------------------------HAGTVVQDGS---------------------VLFRA 403 (834)
T ss_pred hhcCCCCCEecCCCCEE---------------------------Eecceeccee---------------------EEEEE
Confidence 99999999999998755 9999999998 99999
Q ss_pred EEecCccce---eecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccC
Q 002392 273 VFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYD 349 (928)
Q Consensus 273 v~tG~~Tki---~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 349 (928)
+.||.+|.+ ....++++..++++++.+++++.++++++++++++.+++|.+... |
T Consensus 404 ~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~----------~------------ 461 (834)
T PRK10671 404 SAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP----------A------------ 461 (834)
T ss_pred EEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----------c------------
Confidence 999999964 444556667789999999999999999998888888776643211 0
Q ss_pred CCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCC
Q 002392 350 PRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTG 429 (928)
Q Consensus 350 ~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTG 429 (928)
..+...+.+++.+++.+|||+|+++++++...+..++ +++|+++|+++.+|.||+++++||||||
T Consensus 462 -----~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~~le~l~~v~~v~fDKTG 526 (834)
T PRK10671 462 -----PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRA----------AEFGVLVRDADALQRASTLDTLVFDKTG 526 (834)
T ss_pred -----hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH----------HHCCeEEecHHHHHhhcCCCEEEEcCCC
Confidence 0122367788999999999999999999999999988 8999999999999999999999999999
Q ss_pred ccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCC
Q 002392 430 TLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNE 509 (928)
Q Consensus 430 TLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 509 (928)
|||+|+|++..+...+.. .
T Consensus 527 TLT~g~~~v~~~~~~~~~-~------------------------------------------------------------ 545 (834)
T PRK10671 527 TLTEGKPQVVAVKTFNGV-D------------------------------------------------------------ 545 (834)
T ss_pred ccccCceEEEEEEccCCC-C------------------------------------------------------------
Confidence 999999999877532210 0
Q ss_pred CchhHHHHHHH-HHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEE
Q 002392 510 PHSDVIQKFFR-VLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYE 588 (928)
Q Consensus 510 ~~~~~~~~~~~-~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (928)
. .+++. +.+++. .+.||.+.|++++++..... . + ..++
T Consensus 546 --~---~~~l~~a~~~e~---------------~s~hp~a~Ai~~~~~~~~~~--~-------~------------~~~~ 584 (834)
T PRK10671 546 --E---AQALRLAAALEQ---------------GSSHPLARAILDKAGDMTLP--Q-------V------------NGFR 584 (834)
T ss_pred --H---HHHHHHHHHHhC---------------CCCCHHHHHHHHHHhhCCCC--C-------c------------ccce
Confidence 0 01222 222221 23699999999988643210 0 0 1111
Q ss_pred EeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHH
Q 002392 589 LLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRI 668 (928)
Q Consensus 589 il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~ 668 (928)
.+. .+.+...+ +|. .+..|+++.+.+... ..+.+...++.+..+|.+++++|
T Consensus 585 ~~~-------g~Gv~~~~---~g~--~~~~G~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~v~va----------- 636 (834)
T PRK10671 585 TLR-------GLGVSGEA---EGH--ALLLGNQALLNEQQV-----DTKALEAEITAQASQGATPVLLA----------- 636 (834)
T ss_pred Eec-------ceEEEEEE---CCE--EEEEeCHHHHHHcCC-----ChHHHHHHHHHHHhCCCeEEEEE-----------
Confidence 000 01111111 343 234599886643211 12345566778889999999998
Q ss_pred HHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcC
Q 002392 669 WEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACS 748 (928)
Q Consensus 669 ~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~g 748 (928)
.|..++|+++++|++|++++++|+.|++.|++++|+|||+..++..+++++|
T Consensus 637 ----------------------------~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lg 688 (834)
T PRK10671 637 ----------------------------VDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAG 688 (834)
T ss_pred ----------------------------ECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC
Confidence 3567999999999999999999999999999999999999999999999999
Q ss_pred CcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHH
Q 002392 749 LLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMF 828 (928)
Q Consensus 749 i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~ 828 (928)
|.
T Consensus 689 i~------------------------------------------------------------------------------ 690 (834)
T PRK10671 689 ID------------------------------------------------------------------------------ 690 (834)
T ss_pred CC------------------------------------------------------------------------------
Confidence 83
Q ss_pred HHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc--cccc
Q 002392 829 LDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFL 906 (928)
Q Consensus 829 ~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~--f~~l 906 (928)
.++++..|++|..+++.++..+..|+|+|||.||++|++.||+||+|++. ...++++||+++.+ +..|
T Consensus 691 ---------~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g-~~~a~~~ad~vl~~~~~~~i 760 (834)
T PRK10671 691 ---------EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGG-SDVAIETAAITLMRHSLMGV 760 (834)
T ss_pred ---------EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCC-CHHHHHhCCEEEecCCHHHH
Confidence 16678889999999999988889999999999999999999999999643 23389999999995 5558
Q ss_pred hhhhhhhchhhhhhcccccccC
Q 002392 907 ERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 907 ~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
..+ +..||..++++++++.|+
T Consensus 761 ~~~-i~l~r~~~~~i~~Nl~~a 781 (834)
T PRK10671 761 ADA-LAISRATLRNMKQNLLGA 781 (834)
T ss_pred HHH-HHHHHHHHHHHHHHHHHH
Confidence 888 899999999999998764
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-50 Score=423.53 Aligned_cols=445 Identities=20% Similarity=0.249 Sum_probs=346.2
Q ss_pred cceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeeccchhhccCCChh
Q 002392 137 NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEE 216 (928)
Q Consensus 137 ~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~ 216 (928)
...+++++.+|.++.+++.+|+.||+|+|+.||.||+||.+++ |.++||||.+||||.|+.|.++....
T Consensus 103 ~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIe-----G~asVdESAITGESaPViresGgD~s------ 171 (681)
T COG2216 103 ETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIE-----GVASVDESAITGESAPVIRESGGDFS------ 171 (681)
T ss_pred HHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEe-----eeeecchhhccCCCcceeeccCCCcc------
Confidence 3457777756999999999999999999999999999999999 99999999999999999999874331
Q ss_pred hhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccc---eeecCCCCCCccc
Q 002392 217 SFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTK---VMQNATDPPSKRS 293 (928)
Q Consensus 217 ~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tk---i~~~~~~~~~k~s 293 (928)
-+-.||.+ . ++|+...+...--+|. +...++.+..+++
T Consensus 172 ------------------sVtGgT~v--------------------~-SD~l~irita~pG~sFlDrMI~LVEgA~R~KT 212 (681)
T COG2216 172 ------------------SVTGGTRV--------------------L-SDWLKIRITANPGETFLDRMIALVEGAERQKT 212 (681)
T ss_pred ------------------cccCCcEE--------------------e-eeeEEEEEEcCCCccHHHHHHHHhhchhccCC
Confidence 01123333 3 6779888888888884 4566788888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHHHHHHHHHHhcccc
Q 002392 294 KIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIP 373 (928)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP 373 (928)
|-|-.++.+...+.++.++ ++++..-+..|.. .. -..+...+.+++.+||
T Consensus 213 PNEIAL~iLL~~LTliFL~-~~~Tl~p~a~y~~-------------g~----------------~~~i~~LiALlV~LIP 262 (681)
T COG2216 213 PNEIALTILLSGLTLIFLL-AVATLYPFAIYSG-------------GG----------------AASVTVLVALLVCLIP 262 (681)
T ss_pred hhHHHHHHHHHHHHHHHHH-HHHhhhhHHHHcC-------------CC----------------CcCHHHHHHHHHHHhc
Confidence 9998887776655433222 2221111111110 00 0135556777888999
Q ss_pred ceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEEEEEcCeeccCcch
Q 002392 374 ISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMT 453 (928)
Q Consensus 374 ~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~ 453 (928)
-.+.-.++.+-..++-++ .+.+++.++..++|..|.||+++.|||||+|-|+-.-...+..+.
T Consensus 263 TTIGgLLsAIGIAGMdRv----------~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~g------- 325 (681)
T COG2216 263 TTIGGLLSAIGIAGMDRV----------TQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPG------- 325 (681)
T ss_pred ccHHHHHHHhhhhhhhHh----------hhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCC-------
Confidence 988887777777777776 788999999999999999999999999999988755443332111
Q ss_pred HHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHHHHhhhcccccCCC
Q 002392 454 EVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVN 533 (928)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~ 533 (928)
...+++..+..+++-.
T Consensus 326 -----------------------------------------------------------v~~~~la~aa~lsSl~----- 341 (681)
T COG2216 326 -----------------------------------------------------------VSEEELADAAQLASLA----- 341 (681)
T ss_pred -----------------------------------------------------------CCHHHHHHHHHHhhhc-----
Confidence 1122455555544322
Q ss_pred CCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcE
Q 002392 534 EETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQL 613 (928)
Q Consensus 534 ~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~ 613 (928)
-+.|..+.+++.|++.|+....+. .-......||+.+.|..++-.. ++
T Consensus 342 ---------DeTpEGrSIV~LA~~~~~~~~~~~-------------------~~~~~~fvpFtA~TRmSGvd~~--~~-- 389 (681)
T COG2216 342 ---------DETPEGRSIVELAKKLGIELREDD-------------------LQSHAEFVPFTAQTRMSGVDLP--GG-- 389 (681)
T ss_pred ---------cCCCCcccHHHHHHHhccCCCccc-------------------ccccceeeecceecccccccCC--CC--
Confidence 247888999999999986543311 0002346799988776666543 33
Q ss_pred EEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHH
Q 002392 614 LLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAE 693 (928)
Q Consensus 614 ~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~ 693 (928)
.-+-|||.+.|.......+...++.+....++-++.|-.+|+++
T Consensus 390 ~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~------------------------------------ 433 (681)
T COG2216 390 REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVV------------------------------------ 433 (681)
T ss_pred ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEE------------------------------------
Confidence 56779999999999887666688899999999999999999999
Q ss_pred HhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhc
Q 002392 694 KIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQG 773 (928)
Q Consensus 694 ~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~ 773 (928)
.|-.++|++.++|-+|+|.+|-+.+||+.|||.+|+|||++.||..||++.|+..
T Consensus 434 ---~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd---------------------- 488 (681)
T COG2216 434 ---ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD---------------------- 488 (681)
T ss_pred ---ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh----------------------
Confidence 5788999999999999999999999999999999999999999999999999831
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHH
Q 002392 774 DKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTR 853 (928)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~ 853 (928)
..+.++|++|..+++
T Consensus 489 -----------------------------------------------------------------fiAeatPEdK~~~I~ 503 (681)
T COG2216 489 -----------------------------------------------------------------FIAEATPEDKLALIR 503 (681)
T ss_pred -----------------------------------------------------------------hhhcCChHHHHHHHH
Confidence 567899999999999
Q ss_pred HHhcCCCEEEEEcCChhcHHHHHhCCeeEEe-cCCcchhhhhcCcEeecc
Q 002392 854 LVKGTGKTTLAIGDGANDVGMLQEADIGVGI-SGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 854 ~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam-~g~e~~~ak~aAD~vi~~ 902 (928)
.-|..|+.|+|+|||.||.|+|.+||||+|| +|+.. ||++++.|=+|
T Consensus 504 ~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqA--AkEAaNMVDLD 551 (681)
T COG2216 504 QEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAANMVDLD 551 (681)
T ss_pred HHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHH--HHHhhcccccC
Confidence 9999999999999999999999999999999 34444 99999998775
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=99.97 E-value=6.8e-31 Score=275.90 Aligned_cols=222 Identities=26% Similarity=0.375 Sum_probs=185.6
Q ss_pred HHHHHHHHHhHHHHHHHHHhhhhHHHh---cce-eEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCc
Q 002392 110 LIVVIGATMAKEGVEDWRRRKQDIEAN---NRK-VKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDG 185 (928)
Q Consensus 110 l~~vl~i~~~~~~~~~~~r~~~~~~~n---~~~-~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G 185 (928)
++++++++.+.+.++++++++..+.++ +.+ ++|+| ||+++.++|++|+|||||+|++||.+||||+||+ +|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r-~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~----~g 76 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIR-DGRWQKIPSSELVPGDIIILKAGDIVPADGILLE----SG 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEE-TTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE----SS
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEe-ccccccchHhhccceeeeecccccccccCcccee----cc
Confidence 677888888889999999999988875 344 89999 9999999999999999999999999999999998 37
Q ss_pred eEEEEeccCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecC
Q 002392 186 ICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNT 265 (928)
Q Consensus 186 ~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t 265 (928)
.++||||+||||+.|+.|.|. +++..|++++||.+. +
T Consensus 77 ~~~vd~s~ltGes~pv~k~~~------------------------------------------~~~~~~~i~~Gs~v~-~ 113 (230)
T PF00122_consen 77 SAYVDESALTGESEPVKKTPL------------------------------------------PLNPGNIIFAGSIVV-S 113 (230)
T ss_dssp EEEEECHHHHSBSSEEEESSS------------------------------------------CCCTTTEE-TTEEEE-E
T ss_pred ccccccccccccccccccccc------------------------------------------cccccchhhcccccc-c
Confidence 799999999999999999862 466778899999999 8
Q ss_pred CeEEEEEEEecCcccee---ecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCC
Q 002392 266 DYVYGVVVFTGHDTKVM---QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPD 342 (928)
Q Consensus 266 ~~~~gvVv~tG~~Tki~---~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~ 342 (928)
||++++|++||.+|++. +....++.+++++++.++++..+++++.+++++++++++.++... ..|+
T Consensus 114 g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~---- 182 (230)
T PF00122_consen 114 GWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFNDSG-------ISFF---- 182 (230)
T ss_dssp EEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTGSTT-------CHCC----
T ss_pred cccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceecccc-------cccc----
Confidence 89999999999999754 334456667899999999999999988888888877665543110 1232
Q ss_pred CCCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhh
Q 002392 343 DATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEE 416 (928)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~ 416 (928)
..+..++.+++.++|++|+++++++...++.++ .++++++|+++.+|.
T Consensus 183 ----------------~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~----------~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 183 ----------------KSFLFAISLLIVLIPCALPLALPLSLAIAARRL----------AKNGIIVKNLSALEA 230 (230)
T ss_dssp ----------------HHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHH----------HHTTEEESSTTHHHH
T ss_pred ----------------cccccccceeeeecccceeehHHHHHHHHHHHH----------HHCCEEEeCcccccC
Confidence 278888999999999999999999999999998 889999999999984
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.85 E-value=4.8e-21 Score=199.19 Aligned_cols=97 Identities=33% Similarity=0.514 Sum_probs=90.3
Q ss_pred CceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhH
Q 002392 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 777 (928)
Q Consensus 698 ~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 777 (928)
++.++|.+.+.|+++++++++|+.|+++|++++|+|||+..++..+++++||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 789999999999999999999999999999999999999999999999999931
Q ss_pred HHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEee--CcccH--HHHHH
Q 002392 778 ITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRS--SPKQK--ALVTR 853 (928)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~--~p~qK--~~iv~ 853 (928)
..+++++ +|++| ..+++
T Consensus 169 -----------------------------------------------------------~~v~a~~~~kP~~k~~~~~i~ 189 (215)
T PF00702_consen 169 -----------------------------------------------------------SIVFARVIGKPEPKIFLRIIK 189 (215)
T ss_dssp -----------------------------------------------------------EEEEESHETTTHHHHHHHHHH
T ss_pred -----------------------------------------------------------ccccccccccccchhHHHHHH
Confidence 2488999 99999 99999
Q ss_pred HHhcCCCEEEEEcCChhcHHHHHhCC
Q 002392 854 LVKGTGKTTLAIGDGANDVGMLQEAD 879 (928)
Q Consensus 854 ~l~~~g~~vlaiGDG~ND~~ml~~A~ 879 (928)
.++..+..|+|||||.||++|+++||
T Consensus 190 ~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 190 ELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred HHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99766669999999999999999997
No 36
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.49 E-value=3.4e-14 Score=124.20 Aligned_cols=90 Identities=29% Similarity=0.498 Sum_probs=70.6
Q ss_pred hhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCccee
Q 002392 523 AICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRM 602 (928)
Q Consensus 523 ~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 602 (928)
+|||++....++.....+ ..++|+|.||+.++...|..+.. ...+..|++++.+||+|+||||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~----------------~~~~~~~~~~~~~pF~S~rK~m 63 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDI----------------KEIRSKYKIVAEIPFDSERKRM 63 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcH----------------HHHHhhcceeEEEccCccccee
Confidence 589999876554333322 45789999999999999654321 1235789999999999999999
Q ss_pred EEEEEcCCCcEEEEEecCchhhHHHhcc
Q 002392 603 SVMVRNPENQLLLLCKGADSVMFERLSK 630 (928)
Q Consensus 603 sviv~~~~~~~~l~~KGa~~~i~~~~~~ 630 (928)
+||++ .++.+++|+||||+.|+++|+.
T Consensus 64 svv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 64 SVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999 3446788999999999999974
No 37
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.48 E-value=1.4e-13 Score=121.48 Aligned_cols=126 Identities=23% Similarity=0.356 Sum_probs=108.8
Q ss_pred ceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHH
Q 002392 699 LILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENI 778 (928)
Q Consensus 699 l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 778 (928)
+.+.+.++---+|=++++++|++|.+. ++++++|||...+....|+-.|+...
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 567889999999999999999999999 99999999999999999999997321
Q ss_pred HHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcC
Q 002392 779 TKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGT 858 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~ 858 (928)
.+++...|+.|..+++.|++.
T Consensus 72 -----------------------------------------------------------rv~a~a~~e~K~~ii~eLkk~ 92 (152)
T COG4087 72 -----------------------------------------------------------RVFAGADPEMKAKIIRELKKR 92 (152)
T ss_pred -----------------------------------------------------------eeecccCHHHHHHHHHHhcCC
Confidence 278888899999999999889
Q ss_pred CCEEEEEcCChhcHHHHHhCCeeEEecCCc--chhhhhcCcEeecccccchhhh
Q 002392 859 GKTTLAIGDGANDVGMLQEADIGVGISGVE--GMQAVMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 859 g~~vlaiGDG~ND~~ml~~A~vGIam~g~e--~~~ak~aAD~vi~~f~~l~~ll 910 (928)
++.|.|+|||+||+.||++||+||..-+.+ .+.+..+||+++-+-..+..++
T Consensus 93 ~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 93 YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 999999999999999999999999543322 2336689999999877766664
No 38
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.25 E-value=3.1e-11 Score=130.13 Aligned_cols=61 Identities=21% Similarity=0.325 Sum_probs=51.0
Q ss_pred EeeCcc--cHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 841 CRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 841 ~r~~p~--qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
...+|. .|+..++.+ +..| ..|++||||.||++||+.|++||||+|+... +|.+||+|..+
T Consensus 188 ~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~-vK~~A~~vt~~ 254 (270)
T PRK10513 188 LEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPS-VKEVAQFVTKS 254 (270)
T ss_pred EEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHH-HHHhcCeeccC
Confidence 345554 799999998 6666 4699999999999999999999999876544 89999999874
No 39
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.23 E-value=5.2e-11 Score=127.87 Aligned_cols=193 Identities=20% Similarity=0.234 Sum_probs=107.1
Q ss_pred EEeeeccc-CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHH
Q 002392 703 GATAVEDK-LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKV 781 (928)
Q Consensus 703 G~~~ieD~-lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 781 (928)
|.+.-.+. +.+.++++|+++++.|++++++|||+...+..+.+++++.. .++..||...... .+......+...
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~--~~~i~~~~l~~~ 86 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG---PLITFNGALIYNG--GELLFQKPLSRE 86 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc---cEEEeCCeEEecC--CcEEeeecCCHH
Confidence 44444555 89999999999999999999999999999999999999864 3444444432111 111122222222
Q ss_pred HHHHHHHHHHhhhh----hcccc----------cc-----------------ccce---EEEEEccchhhHHhHHHHHHH
Q 002392 782 SLESVTKQIREGIS----QVNSA----------KE-----------------SKVT---FGLVIDGKSLDFALDKKLEKM 827 (928)
Q Consensus 782 ~~~~~~~~~~~~~~----~~~~~----------~~-----------------~~~~---~~~vi~g~~l~~~~~~~~~~~ 827 (928)
....+......... ..... .. .... ..+......+..+ ...+.+.
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~ 165 (264)
T COG0561 87 DVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEEL-VEALRKR 165 (264)
T ss_pred HHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHH-HHHHhhh
Confidence 22222222211000 00000 00 0000 0000001111111 1111111
Q ss_pred HHHhh--ccCCceEEEeeCcc--cHHHHHHHH-hcCCC---EEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEe
Q 002392 828 FLDLA--IDCASVICCRSSPK--QKALVTRLV-KGTGK---TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYA 899 (928)
Q Consensus 828 ~~~~~--~~~~~~i~~r~~p~--qK~~iv~~l-~~~g~---~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~v 899 (928)
+.... .......+....|. .|+..++.+ +..|. .|+||||+.||++||+.|+.||||+|+ .+.+|+.||++
T Consensus 166 ~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na-~~~~k~~A~~v 244 (264)
T COG0561 166 FPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA-DEELKELADYV 244 (264)
T ss_pred ccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC-CHHHHhhCCcc
Confidence 11000 00000011334443 799999999 66664 499999999999999999999999887 44499999977
Q ss_pred ecc
Q 002392 900 IAQ 902 (928)
Q Consensus 900 i~~ 902 (928)
...
T Consensus 245 t~~ 247 (264)
T COG0561 245 TTS 247 (264)
T ss_pred cCC
Confidence 553
No 40
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.15 E-value=2.3e-10 Score=123.44 Aligned_cols=61 Identities=21% Similarity=0.263 Sum_probs=50.1
Q ss_pred EEeeCcc--cHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcE--eec
Q 002392 840 CCRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDY--AIA 901 (928)
Q Consensus 840 ~~r~~p~--qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~--vi~ 901 (928)
+...+|. .|+..++.+ +..| ..|++||||.||++||+.|+.||||+|+... +|.+||+ ++.
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~-vK~~A~~~~v~~ 247 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQ-LRAELPHLPVIG 247 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHH-HHHhCCCCeecC
Confidence 3455555 699999999 6666 4699999999999999999999999776544 8999997 554
No 41
>PRK10976 putative hydrolase; Provisional
Probab=99.11 E-value=4.6e-10 Score=120.69 Aligned_cols=62 Identities=27% Similarity=0.288 Sum_probs=50.4
Q ss_pred EEeeCcc--cHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCc--Eeecc
Q 002392 840 CCRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD--YAIAQ 902 (928)
Q Consensus 840 ~~r~~p~--qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD--~vi~~ 902 (928)
+....|. .|+..++.+ +..| ..|+|||||.||++||+.|++||||+|+... +|+.|| +|+..
T Consensus 181 ~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~-vK~~A~~~~v~~~ 250 (266)
T PRK10976 181 CLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQR-LKDLLPELEVIGS 250 (266)
T ss_pred eEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHH-HHHhCCCCeeccc
Confidence 3455554 699999998 6666 4599999999999999999999999877554 899988 66653
No 42
>PLN02887 hydrolase family protein
Probab=99.07 E-value=2.4e-10 Score=132.75 Aligned_cols=61 Identities=30% Similarity=0.393 Sum_probs=50.8
Q ss_pred EeeCcc--cHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 841 CRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 841 ~r~~p~--qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
..+.|. .|+..++.+ +..| ..|+|||||.||++||+.|++||||+|+... +|++||+|..+
T Consensus 499 lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~ee-VK~~Ad~VT~s 565 (580)
T PLN02887 499 LEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEK-TKAVADVIGVS 565 (580)
T ss_pred EEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHH-HHHhCCEEeCC
Confidence 344444 799999999 6666 4699999999999999999999999777544 89999999864
No 43
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.07 E-value=9.8e-10 Score=115.01 Aligned_cols=187 Identities=15% Similarity=0.129 Sum_probs=98.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
.+.+.+.++|++|+++||+++++|||+...+..+++.+|+.. ..+..+|.......-........+...........
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD---PVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---eEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh
Confidence 477899999999999999999999999999999999998532 23333333110000000000000000000000000
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCc--ccHHHHHHHH-hcCC---CEEE
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSP--KQKALVTRLV-KGTG---KTTL 863 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p--~qK~~iv~~l-~~~g---~~vl 863 (928)
....................+......... . .+.+.+......+....+....| ..|...++.+ +..| ..++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i 169 (225)
T TIGR01482 92 KTFPFSRLKVQYPRRASLVKMRYGIDVDTV-R-EIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETL 169 (225)
T ss_pred cccchhhhccccccccceEEEeecCCHHHH-H-HHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEE
Confidence 000000000000000111111111111111 1 11111110000001112334444 3799999888 5555 4699
Q ss_pred EEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 864 AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 864 aiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
+|||+.||++|++.|++||+|+|+... +|..||+|...
T Consensus 170 ~~GD~~NDi~m~~~ag~~vam~Na~~~-~k~~A~~vt~~ 207 (225)
T TIGR01482 170 VCGDSENDIDLFEVPGFGVAVANAQPE-LKEWADYVTES 207 (225)
T ss_pred EECCCHhhHHHHHhcCceEEcCChhHH-HHHhcCeecCC
Confidence 999999999999999999999876543 89999999864
No 44
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.06 E-value=1e-09 Score=115.34 Aligned_cols=184 Identities=17% Similarity=0.175 Sum_probs=100.2
Q ss_pred ccc-CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHH
Q 002392 708 EDK-LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESV 786 (928)
Q Consensus 708 eD~-lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (928)
.|+ +.+.+.++|++|+++|++++++|||+...+..+++.+|+.. .++..+|.........+......+.. ...+
T Consensus 17 ~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~--~~~~ 91 (230)
T PRK01158 17 KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG---PVIAENGGVISVGFDGKRIFLGDIEE--CEKA 91 (230)
T ss_pred CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---cEEEecCeEEEEcCCCCEEEEcchHH--HHHH
Confidence 444 78899999999999999999999999999999999998742 23333333110000000000001100 0011
Q ss_pred HHHHHhhhh----hccccccccceEEEEE-ccchhhHHhHHHHHHHHHHhh---ccCCceEEEeeCcc--cHHHHHHHH-
Q 002392 787 TKQIREGIS----QVNSAKESKVTFGLVI-DGKSLDFALDKKLEKMFLDLA---IDCASVICCRSSPK--QKALVTRLV- 855 (928)
Q Consensus 787 ~~~~~~~~~----~~~~~~~~~~~~~~vi-~g~~l~~~~~~~~~~~~~~~~---~~~~~~i~~r~~p~--qK~~iv~~l- 855 (928)
...+..... .+...........+.+ ..... +.....+.... .......+....|. .|+..++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~ 166 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPV-----EEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLA 166 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccH-----HHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHH
Confidence 111100000 0000000000011111 11111 11112121111 00011123455554 499999888
Q ss_pred hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 856 KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 856 ~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
+..| ..+++|||+.||++|++.|++||+|+|+... +|++||++..+
T Consensus 167 ~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~-vk~~a~~v~~~ 215 (230)
T PRK01158 167 ELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEE-LKEAADYVTEK 215 (230)
T ss_pred HHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccHH-HHHhcceEecC
Confidence 5555 4599999999999999999999999776543 89999999874
No 45
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.03 E-value=2.6e-09 Score=113.68 Aligned_cols=188 Identities=19% Similarity=0.176 Sum_probs=104.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
..+.+.+.++|++|+++|++++++|||.+..+..+..++++. ...+..+|...+ ..-.+......+.......+..
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~---~~~I~~nGa~i~-~~~~~~l~~~~i~~~~~~~i~~ 89 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID---DYFICSNGALID-DPKGKILYEKPIDSDDVKKILK 89 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC---SEEEEGGGTEEE-ETTTEEEEEESB-HHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch---hhhcccccceee-ecccccchhhheeccchhheee
Confidence 447789999999999999999999999999999999999875 223333333210 0000000011111111111111
Q ss_pred HHHhhhhhcc---------c---------------------------cccccceEEEEEccchhhHHhHHHHHHHHHHhh
Q 002392 789 QIREGISQVN---------S---------------------------AKESKVTFGLVIDGKSLDFALDKKLEKMFLDLA 832 (928)
Q Consensus 789 ~~~~~~~~~~---------~---------------------------~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~ 832 (928)
.+......+. . ......+.. +.....-...+.+.+.+.+....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~-~~~~~~~~~~l~~~l~~~~~~~~ 168 (254)
T PF08282_consen 90 YLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKIL-FFPDPEDLEQLREELKKKFPNLI 168 (254)
T ss_dssp HHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEE-EESCHHHHHHHHHHHHHHHTTTE
T ss_pred hhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeee-ccccchhhhhhhhhhccccCcce
Confidence 1111000000 0 000011112 11111111122334444443221
Q ss_pred -ccCCceEEEeeCc--ccHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 833 -IDCASVICCRSSP--KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 833 -~~~~~~i~~r~~p--~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
......-+..++| -.|+..++.+ +..| ..+++|||+.||++||+.|+.||+|+++... ++..||+++..
T Consensus 169 ~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~-~k~~a~~i~~~ 244 (254)
T PF08282_consen 169 DVVRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPE-LKKAADYITPS 244 (254)
T ss_dssp EEEEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HH-HHHHSSEEESS
T ss_pred eEEEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHH-HHHhCCEEecC
Confidence 0000111333444 4799999998 5555 5799999999999999999999999877544 89999999885
No 46
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.98 E-value=3.1e-09 Score=110.32 Aligned_cols=178 Identities=15% Similarity=0.168 Sum_probs=98.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchh----hHhhhhcchhHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDM----EALEKQGDKENITKVSLES 785 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~ 785 (928)
++.+.+.++|++|+++|++++++|||+...+..+++.+++.. ..+..||.-... ..+.... ...+..... .
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~---~~i~~NGa~i~~~~~~~~~~~~~-~~~~~~~~~-~ 92 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG---PVVAENGGVIFYNKEDIFLANME-EEWFLDEEK-K 92 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC---cEEEccCcEEEeCCCcEEEeccc-chhhHHHhh-h
Confidence 488999999999999999999999999999999999988642 233333321110 0000000 000000000 0
Q ss_pred HHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCc--ccHHHHHHHH-hcCC---
Q 002392 786 VTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSP--KQKALVTRLV-KGTG--- 859 (928)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p--~qK~~iv~~l-~~~g--- 859 (928)
. .. ......... ......+..+......+ ...+... .+.... ...+..++| ..|+..++.+ +..|
T Consensus 93 ~--~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~l~~~--~~~~~~-~~~~~ei~~~~~~K~~~i~~l~~~~~i~~ 163 (215)
T TIGR01487 93 K--RF--PRDRLSNEY-PRASLVIMREGKDVDEV-REIIKER--GLNLVD-SGFAIHIMKKGVDKGVGVEKLKELLGIKP 163 (215)
T ss_pred h--hh--hhhhccccc-ceeEEEEecCCccHHHH-HHHHHhC--CeEEEe-cCceEEEecCCCChHHHHHHHHHHhCCCH
Confidence 0 00 000000000 01112222233222211 1111110 010000 011233333 4899999988 5555
Q ss_pred CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 860 KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 860 ~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
..+++|||+.||++|++.|++||+|+++... ++..||++...
T Consensus 164 ~~~i~iGDs~ND~~ml~~ag~~vam~na~~~-~k~~A~~v~~~ 205 (215)
T TIGR01487 164 EEVAAIGDSENDIDLFRVVGFKVAVANADDQ-LKEIADYVTSN 205 (215)
T ss_pred HHEEEECCCHHHHHHHHhCCCeEEcCCccHH-HHHhCCEEcCC
Confidence 3599999999999999999999999776543 89999999863
No 47
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.97 E-value=5.3e-09 Score=112.91 Aligned_cols=56 Identities=27% Similarity=0.424 Sum_probs=47.0
Q ss_pred ccHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 846 ~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
..|+..++.+ +..| ..|+||||+.||++|++.|++||+|+++. ..++..||+++.+
T Consensus 198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~-~~lk~~Ad~v~~~ 257 (272)
T PRK10530 198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNAD-DAVKARADLVIGD 257 (272)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCch-HHHHHhCCEEEec
Confidence 3699888877 6655 45999999999999999999999997664 4478999999874
No 48
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.94 E-value=8.1e-09 Score=111.10 Aligned_cols=39 Identities=10% Similarity=0.130 Sum_probs=36.6
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
+-+.++++|++|+++||+++++|||+...+..+++++|+
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~ 63 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGL 63 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCC
Confidence 457799999999999999999999999999999999997
No 49
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.87 E-value=3.9e-08 Score=100.59 Aligned_cols=121 Identities=24% Similarity=0.240 Sum_probs=89.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
.++.|++.+.++.++++|.+||++||-...-+..+|+.+|+...-...+.....
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC--------------------------
Confidence 789999999999999999999999999999999999999996443332222110
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCCC---EEEE
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGK---TTLA 864 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g~---~vla 864 (928)
.++|. ++.-.+..+.|...++.+ ...|. .+.|
T Consensus 130 ---------------------~ltG~-----------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a 165 (212)
T COG0560 130 ---------------------KLTGR-----------------------VVGPICDGEGKAKALRELAAELGIPLEETVA 165 (212)
T ss_pred ---------------------EEece-----------------------eeeeecCcchHHHHHHHHHHHcCCCHHHeEE
Confidence 12221 122334456798888777 55554 5999
Q ss_pred EcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeec
Q 002392 865 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIA 901 (928)
Q Consensus 865 iGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~ 901 (928)
+|||.||+|||+.||.+|++..... ....|+..+.
T Consensus 166 ~gDs~nDlpml~~ag~~ia~n~~~~--l~~~a~~~~~ 200 (212)
T COG0560 166 YGDSANDLPMLEAAGLPIAVNPKPK--LRALADVRIW 200 (212)
T ss_pred EcCchhhHHHHHhCCCCeEeCcCHH--HHHHHHHhcC
Confidence 9999999999999999999966544 3444444333
No 50
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.87 E-value=1.9e-08 Score=107.36 Aligned_cols=40 Identities=18% Similarity=0.111 Sum_probs=36.6
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.-+.+.++|++|+++|++++++|||+...+..+.+++|+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4457999999999999999999999999999999999863
No 51
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.82 E-value=2.6e-08 Score=108.47 Aligned_cols=132 Identities=24% Similarity=0.235 Sum_probs=92.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.|++.+.|+.|++.|++++++||.....+..+.+++|+..--...+.+...
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg--------------------------- 233 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG--------------------------- 233 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC---------------------------
Confidence 48899999999999999999999999988888888888884211101111000
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEE
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 865 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlai 865 (928)
.++|.... .+ +....|..+++.+ ++.| ..|+||
T Consensus 234 --------------------~ltg~v~g--------------------~i---v~~k~K~~~L~~la~~lgi~~~qtIaV 270 (322)
T PRK11133 234 --------------------KLTGNVLG--------------------DI---VDAQYKADTLTRLAQEYEIPLAQTVAI 270 (322)
T ss_pred --------------------EEEeEecC--------------------cc---CCcccHHHHHHHHHHHcCCChhhEEEE
Confidence 00110000 01 2235788888888 5555 579999
Q ss_pred cCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccccchhhhhhhc
Q 002392 866 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHG 914 (928)
Q Consensus 866 GDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~l~~lll~~G 914 (928)
|||.||++|++.||+|||+...+. .++.||+++. ...|..+|...|
T Consensus 271 GDg~NDl~m~~~AGlgiA~nAkp~--Vk~~Ad~~i~-~~~l~~~l~~~~ 316 (322)
T PRK11133 271 GDGANDLPMIKAAGLGIAYHAKPK--VNEQAQVTIR-HADLMGVLCILS 316 (322)
T ss_pred ECCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEec-CcCHHHHHHHhc
Confidence 999999999999999999943433 8899999996 455555544444
No 52
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.79 E-value=1.5e-08 Score=108.18 Aligned_cols=61 Identities=26% Similarity=0.456 Sum_probs=49.9
Q ss_pred EeeCcc--cHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 841 CRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 841 ~r~~p~--qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
....|. .|+..++.+ +..| ..+++|||+.||++|++.|++|++|+++.. .++..||+++..
T Consensus 180 leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~-~~k~~a~~~~~~ 246 (256)
T TIGR00099 180 IEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADE-ELKALADYVTDS 246 (256)
T ss_pred EEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchH-HHHHhCCEEecC
Confidence 345554 699999998 5554 469999999999999999999999976643 389999999874
No 53
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.77 E-value=4.5e-08 Score=99.71 Aligned_cols=113 Identities=20% Similarity=0.142 Sum_probs=83.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.|++.+.|+.+++.| ++.|+||-....+..+++.+|+..--.....+....
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--------------------------
Confidence 47999999999999975 999999999999999999999842111000000000
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCCh
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ 869 (928)
.++|. .. ..+..|..+++.++..+..++++|||.
T Consensus 121 --------------------~~tG~------------------------~~--~~~~~K~~~l~~l~~~~~~~v~vGDs~ 154 (203)
T TIGR02137 121 --------------------RVVGY------------------------QL--RQKDPKRQSVIAFKSLYYRVIAAGDSY 154 (203)
T ss_pred --------------------eeECe------------------------ee--cCcchHHHHHHHHHhhCCCEEEEeCCH
Confidence 01110 11 346689999999977777899999999
Q ss_pred hcHHHHHhCCeeEEecCCcchhhhhcCc
Q 002392 870 NDVGMLQEADIGVGISGVEGMQAVMSSD 897 (928)
Q Consensus 870 ND~~ml~~A~vGIam~g~e~~~ak~aAD 897 (928)
||++|++.||+||++..++. .+++||
T Consensus 155 nDl~ml~~Ag~~ia~~ak~~--~~~~~~ 180 (203)
T TIGR02137 155 NDTTMLSEAHAGILFHAPEN--VIREFP 180 (203)
T ss_pred HHHHHHHhCCCCEEecCCHH--HHHhCC
Confidence 99999999999999987776 444443
No 54
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.65 E-value=3.1e-07 Score=98.96 Aligned_cols=42 Identities=14% Similarity=0.058 Sum_probs=38.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
..+.+++.++|++|+++|++++++|||+...+..+++++|+.
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 456778999999999999999999999999999999999975
No 55
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.58 E-value=3.5e-07 Score=97.19 Aligned_cols=183 Identities=13% Similarity=0.132 Sum_probs=96.4
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhH--hhhhcchhHHHHHH-HH
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEA--LEKQGDKENITKVS-LE 784 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~-~~ 784 (928)
..++.+.+.++|++++++|++++++|||....+..+.+++++..+. ..+.-+|....... .........+.... ..
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~ 97 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRD 97 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCCCCcCCHHHHHHHhcccCHH
Confidence 3557799999999999999999999999999999999989876543 22333333111000 00000000000000 01
Q ss_pred HHHHHHHhhhhhcccc---ccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceE----EEeeCc--ccHHHHHHHH
Q 002392 785 SVTKQIREGISQVNSA---KESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI----CCRSSP--KQKALVTRLV 855 (928)
Q Consensus 785 ~~~~~~~~~~~~~~~~---~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i----~~r~~p--~qK~~iv~~l 855 (928)
.+.. +......+... .....+..+.......... ...+.+.+......+..++ +....| ..|...++.+
T Consensus 98 ~~~~-~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l 175 (249)
T TIGR01485 98 IVVA-ITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEV-IKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYL 175 (249)
T ss_pred HHHH-HHhcCcccccCCccccCCeeEEEEechhhhhHH-HHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHH
Confidence 1111 11111111110 1112233333332221111 1222333322111111111 223444 3799999988
Q ss_pred -hcCC---CEEEEEcCChhcHHHHHh-CCeeEEecCCcchhhhh
Q 002392 856 -KGTG---KTTLAIGDGANDVGMLQE-ADIGVGISGVEGMQAVM 894 (928)
Q Consensus 856 -~~~g---~~vlaiGDG~ND~~ml~~-A~vGIam~g~e~~~ak~ 894 (928)
+..| ..|+++||+.||++|++. ++.||+|+|+... ++.
T Consensus 176 ~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~-~k~ 218 (249)
T TIGR01485 176 LQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEE-LLQ 218 (249)
T ss_pred HHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHH-HHH
Confidence 5554 569999999999999998 6799999876543 454
No 56
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.55 E-value=3.9e-07 Score=96.01 Aligned_cols=180 Identities=16% Similarity=0.166 Sum_probs=92.8
Q ss_pred HHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchh-hHhhhhcc-hhHHHHH-HHHHHHHHHHh
Q 002392 716 PECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDM-EALEKQGD-KENITKV-SLESVTKQIRE 792 (928)
Q Consensus 716 ~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~-~~~~~~~~-~~~~~~~-~~~~~~~~~~~ 792 (928)
.++++ ++++||+++++|||+...+..+...+++..+. .++..+|..... ........ ...+... ....+...+..
T Consensus 21 ~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~-~~I~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (236)
T TIGR02471 21 VELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPD-VLIARVGTEIYYGPELQPDRFWQKHIDHDWRRQAVVEALAD 98 (236)
T ss_pred HHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCC-EEEECCCceEEeCCCCCCChhHHHHHhcCCCHHHHHHHHhc
Confidence 36666 69999999999999999999999999874322 333434432100 00000000 0000000 00111111110
Q ss_pred hhhhcccccc---ccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceE----EEeeCcc--cHHHHHHHH-hcCC---
Q 002392 793 GISQVNSAKE---SKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI----CCRSSPK--QKALVTRLV-KGTG--- 859 (928)
Q Consensus 793 ~~~~~~~~~~---~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i----~~r~~p~--qK~~iv~~l-~~~g--- 859 (928)
...+..... ...+..+....+.... + .+....+......+..+. +....|. .|...++.+ ++.|
T Consensus 99 -~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~ 175 (236)
T TIGR02471 99 -IPGLTLQDDQEQGPFKISYLLDPEGEPI-L-PQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPL 175 (236)
T ss_pred -CCCcEeCChhcCCCeeEEEEECcccchH-H-HHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCH
Confidence 000100011 1122333333321111 1 112222222111111111 1134443 799999998 6555
Q ss_pred CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCc----Eeec
Q 002392 860 KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD----YAIA 901 (928)
Q Consensus 860 ~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD----~vi~ 901 (928)
..+++|||+.||++|++.|++||+|+++... ++..|| ++..
T Consensus 176 ~~~i~~GD~~nD~~ml~~~~~~iav~na~~~-~k~~a~~~~~~v~~ 220 (236)
T TIGR02471 176 EQILVAGDSGNDEEMLRGLTLGVVVGNHDPE-LEGLRHQQRIYFAN 220 (236)
T ss_pred HHEEEEcCCccHHHHHcCCCcEEEEcCCcHH-HHHhhcCCcEEEcC
Confidence 3589999999999999999999999876554 888999 6544
No 57
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.53 E-value=2.9e-07 Score=90.34 Aligned_cols=95 Identities=15% Similarity=0.158 Sum_probs=74.0
Q ss_pred HHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhh
Q 002392 717 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 796 (928)
Q Consensus 717 ~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (928)
.+|+.|+++|+++.|+|+.+...+..+.+.+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 58999999999999999999999999999999841
Q ss_pred ccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEEcCChhcH
Q 002392 797 VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDV 872 (928)
Q Consensus 797 ~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlaiGDG~ND~ 872 (928)
++.... .|...+..+ +..+ ..+++|||+.||+
T Consensus 76 ------------------------------------------~f~~~k--pkp~~~~~~~~~l~~~~~ev~~iGD~~nDi 111 (169)
T TIGR02726 76 ------------------------------------------FHEGIK--KKTEPYAQMLEEMNISDAEVCYVGDDLVDL 111 (169)
T ss_pred ------------------------------------------EEecCC--CCHHHHHHHHHHcCcCHHHEEEECCCHHHH
Confidence 111111 222333333 3333 4699999999999
Q ss_pred HHHHhCCeeEEecCCcchhhhhcCcEeec
Q 002392 873 GMLQEADIGVGISGVEGMQAVMSSDYAIA 901 (928)
Q Consensus 873 ~ml~~A~vGIam~g~e~~~ak~aAD~vi~ 901 (928)
+|++.|+++++|+++... ++..|++|..
T Consensus 112 ~~~~~ag~~~am~nA~~~-lk~~A~~I~~ 139 (169)
T TIGR02726 112 SMMKRVGLAVAVGDAVAD-VKEAAAYVTT 139 (169)
T ss_pred HHHHHCCCeEECcCchHH-HHHhCCEEcC
Confidence 999999999999877643 8999999886
No 58
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.52 E-value=3.7e-07 Score=94.95 Aligned_cols=43 Identities=7% Similarity=0.037 Sum_probs=38.8
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.+..-+++.++|++|+++|++++++|||+...+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556678999999999999999999999999999999999973
No 59
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.52 E-value=5.2e-07 Score=93.90 Aligned_cols=122 Identities=22% Similarity=0.313 Sum_probs=85.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.+++++.|+.|++.|+++.|+||.....+..+.+.+|+..--...+..+..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--------------------------- 137 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDG--------------------------- 137 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECC---------------------------
Confidence 58999999999999999999999999999999999999984311000000000
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEe-eCcccHHHHHHHH-hcCC---CEEEE
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCR-SSPKQKALVTRLV-KGTG---KTTLA 864 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r-~~p~qK~~iv~~l-~~~g---~~vla 864 (928)
.++| .+... ..+..|..+++.+ ++.+ ..+++
T Consensus 138 --------------------~~~~------------------------~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~ 173 (219)
T TIGR00338 138 --------------------KLTG------------------------LVEGPIVDASYKGKTLLILLRKEGISPENTVA 173 (219)
T ss_pred --------------------EEEE------------------------EecCcccCCcccHHHHHHHHHHcCCCHHHEEE
Confidence 0000 00001 1123366666655 4443 35899
Q ss_pred EcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccc
Q 002392 865 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 904 (928)
Q Consensus 865 iGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~ 904 (928)
|||+.+|+.|.+.||++|++.+.+. ++.+||++|.+.+
T Consensus 174 iGDs~~Di~aa~~ag~~i~~~~~~~--~~~~a~~~i~~~~ 211 (219)
T TIGR00338 174 VGDGANDLSMIKAAGLGIAFNAKPK--LQQKADICINKKD 211 (219)
T ss_pred EECCHHHHHHHHhCCCeEEeCCCHH--HHHhchhccCCCC
Confidence 9999999999999999999977654 7789999998643
No 60
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.50 E-value=1.2e-06 Score=91.35 Aligned_cols=48 Identities=19% Similarity=0.123 Sum_probs=39.6
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCC
Q 002392 713 KGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLD 762 (928)
Q Consensus 713 ~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~ 762 (928)
+.++++|++|+++||+++++|||+...+..+.+.+|+.. ...+..||.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~--~~~I~~NGa 66 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTG--DPYIAENGA 66 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC--CcEEEeCCc
Confidence 348999999999999999999999999999999999741 234555544
No 61
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.48 E-value=7.5e-07 Score=86.81 Aligned_cols=95 Identities=16% Similarity=0.225 Sum_probs=73.3
Q ss_pred HHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhc
Q 002392 718 CIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQV 797 (928)
Q Consensus 718 aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
+|+.|++.|+++.|+||++...+..+.+.+|+..
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------------------------- 69 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------------------------- 69 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----------------------------------------------
Confidence 9999999999999999999999999999999831
Q ss_pred cccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEEcCChhcHH
Q 002392 798 NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDVG 873 (928)
Q Consensus 798 ~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ 873 (928)
.+.. ...|...+..+ ++.| ..+++|||+.||++
T Consensus 70 -----------------------------------------~~~~--~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~ 106 (154)
T TIGR01670 70 -----------------------------------------LYQG--QSNKLIAFSDILEKLALAPENVAYIGDDLIDWP 106 (154)
T ss_pred -----------------------------------------EEec--ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 0000 01344444444 3333 56999999999999
Q ss_pred HHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 874 MLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 874 ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
|++.|+++++|.+.... .+..||+++..
T Consensus 107 ~~~~ag~~~~v~~~~~~-~~~~a~~i~~~ 134 (154)
T TIGR01670 107 VMEKVGLSVAVADAHPL-LIPRADYVTRI 134 (154)
T ss_pred HHHHCCCeEecCCcCHH-HHHhCCEEecC
Confidence 99999999999766433 78889999973
No 62
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.45 E-value=2e-06 Score=91.89 Aligned_cols=184 Identities=9% Similarity=0.075 Sum_probs=94.8
Q ss_pred cCCCChHHHHHHHHH-cCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQ-AGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~-aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
.+-+++.++|++|++ .|++++++|||+...+..+...+++. ++..+|.... ..........+.......+..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~-----~i~~nGa~i~--~~~~~~~~~~l~~~~~~~i~~ 108 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFP-----LAGVHGAERR--DINGKTHIVHLPDAIARDISV 108 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccce-----EEEeCCCeee--cCCCCeeeccCChhHHHHHHH
Confidence 456889999999998 79999999999999998887766531 2222222100 000000001111111111222
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhH--HhHHHHHHHHHHhhc---cCCceEEEeeCc--ccHHHHHHHH-hcCC-
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDF--ALDKKLEKMFLDLAI---DCASVICCRSSP--KQKALVTRLV-KGTG- 859 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~--~~~~~~~~~~~~~~~---~~~~~i~~r~~p--~qK~~iv~~l-~~~g- 859 (928)
.+...........-......++........ .....+.+.+..... .....-+..+.| ..|+..++.+ +..|
T Consensus 109 ~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~ 188 (266)
T PRK10187 109 QLHTALAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPF 188 (266)
T ss_pred HHHHHhccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCC
Confidence 221111000011001111222222221111 000112222211110 001112334444 3899999888 5554
Q ss_pred --CEEEEEcCChhcHHHHHhC----CeeEEecCCcchhhhhcCcEeeccccc
Q 002392 860 --KTTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDYAIAQFRF 905 (928)
Q Consensus 860 --~~vlaiGDG~ND~~ml~~A----~vGIam~g~e~~~ak~aAD~vi~~f~~ 905 (928)
..++++||+.||.+||+.+ ++||+|+++. ..|++.+.+-..
T Consensus 189 ~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~-----~~A~~~l~~~~~ 235 (266)
T PRK10187 189 AGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTGA-----TQASWRLAGVPD 235 (266)
T ss_pred CCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCCC-----CcCeEeCCCHHH
Confidence 5799999999999999999 9999996554 358888887443
No 63
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.41 E-value=8.7e-07 Score=89.05 Aligned_cols=112 Identities=19% Similarity=0.215 Sum_probs=81.9
Q ss_pred HHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhh
Q 002392 717 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 796 (928)
Q Consensus 717 ~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (928)
.+|+.|+++|+++.++||++...+..+++++|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------------------- 89 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------------------- 89 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------------------
Confidence 69999999999999999999999999999999731
Q ss_pred ccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEEcCChhcH
Q 002392 797 VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDV 872 (928)
Q Consensus 797 ~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlaiGDG~ND~ 872 (928)
++. ....|...++.+ +..| ..|++|||+.||+
T Consensus 90 ------------------------------------------~f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~ 125 (183)
T PRK09484 90 ------------------------------------------LYQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDW 125 (183)
T ss_pred ------------------------------------------eec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 010 112344444444 4444 4699999999999
Q ss_pred HHHHhCCeeEEecCCcchhhhhcCcEeec------ccccchhhh-hhhchhhh
Q 002392 873 GMLQEADIGVGISGVEGMQAVMSSDYAIA------QFRFLERLL-LVHGHWCY 918 (928)
Q Consensus 873 ~ml~~A~vGIam~g~e~~~ak~aAD~vi~------~f~~l~~ll-l~~Gr~~~ 918 (928)
+|++.|++++++++.+. .++..||+++. ..+.+..+| ..-|+|-+
T Consensus 126 ~~a~~aG~~~~v~~~~~-~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~~~ 177 (183)
T PRK09484 126 PVMEKVGLSVAVADAHP-LLLPRADYVTRIAGGRGAVREVCDLLLLAQGKLDE 177 (183)
T ss_pred HHHHHCCCeEecCChhH-HHHHhCCEEecCCCCCCHHHHHHHHHHHhcCChhh
Confidence 99999999999864433 36788999996 345566553 34555533
No 64
>PLN02382 probable sucrose-phosphatase
Probab=98.37 E-value=3.9e-06 Score=95.04 Aligned_cols=181 Identities=18% Similarity=0.159 Sum_probs=94.3
Q ss_pred CCCChHHHH-HHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchh-hHhhh-hcchhHHHHHH-HHHH
Q 002392 711 LQKGVPECI-DKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDM-EALEK-QGDKENITKVS-LESV 786 (928)
Q Consensus 711 lr~~~~~aI-~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~-~~~~~-~~~~~~~~~~~-~~~~ 786 (928)
+.+....++ +++++.|+.++++|||.+..+..+.++.++..+.. ++..+|..... ..... ..-...+.... ...+
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~-~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDI-TIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIV 107 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCE-EEEcCCcEEEeCCCCccChhHHHHHhccCChhhH
Confidence 333345556 88999999999999999999999999999877652 22223321100 00000 00000000000 0101
Q ss_pred HHHHHhhhhhcc--c-cccccceEEEEEccchhhHHhHHHHHHHHHHhhccCC----ceEEEeeCcc--cHHHHHHHH-h
Q 002392 787 TKQIREGISQVN--S-AKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCA----SVICCRSSPK--QKALVTRLV-K 856 (928)
Q Consensus 787 ~~~~~~~~~~~~--~-~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~----~~i~~r~~p~--qK~~iv~~l-~ 856 (928)
...+.. ...+. . ......+..+..+......+ ...+.+.+......+. ..-+..+.|. .|+..++.+ +
T Consensus 108 ~~~~~~-~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~-~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~ 185 (413)
T PLN02382 108 VEETSK-FPELKLQPETEQRPHKVSFYVDKKKAQEV-IKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLK 185 (413)
T ss_pred HHHHhc-CCCcccCCcccCCCeEEEEEechHHhHHH-HHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHH
Confidence 111110 00010 0 11122233444433222221 2233333322111111 0123455554 699999999 5
Q ss_pred cC---C---CEEEEEcCChhcHHHHHhCC-eeEEecCCcchhhhhc
Q 002392 857 GT---G---KTTLAIGDGANDVGMLQEAD-IGVGISGVEGMQAVMS 895 (928)
Q Consensus 857 ~~---g---~~vlaiGDG~ND~~ml~~A~-vGIam~g~e~~~ak~a 895 (928)
.. | ..|++|||+.||++||+.|+ .||+|+|+... +++.
T Consensus 186 ~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~e-lk~~ 230 (413)
T PLN02382 186 KLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEE-LLQW 230 (413)
T ss_pred HhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHH-HHHH
Confidence 54 3 47999999999999999999 69999876543 5553
No 65
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.35 E-value=4.8e-06 Score=96.72 Aligned_cols=39 Identities=5% Similarity=-0.019 Sum_probs=35.9
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
.-+.+.++|++|+++||+++++|||....+..+++++|+
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 445789999999999999999999999999999999986
No 66
>PTZ00174 phosphomannomutase; Provisional
Probab=98.34 E-value=1.3e-06 Score=92.61 Aligned_cols=54 Identities=24% Similarity=0.332 Sum_probs=40.3
Q ss_pred eeCcc--cHHHHHHHHhcCCCEEEEEcC----ChhcHHHHHhC-CeeEEecCCcchhhhhcC
Q 002392 842 RSSPK--QKALVTRLVKGTGKTTLAIGD----GANDVGMLQEA-DIGVGISGVEGMQAVMSS 896 (928)
Q Consensus 842 r~~p~--qK~~iv~~l~~~g~~vlaiGD----G~ND~~ml~~A-~vGIam~g~e~~~ak~aA 896 (928)
.+.|. .|+..++.+.+....|+|||| |.||++||+.| -.|++++|++.. +|..+
T Consensus 181 eI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~-~~~~~ 241 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDT-IKILK 241 (247)
T ss_pred EeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHH-HHHHH
Confidence 44443 799999999333678999999 99999999976 567777676553 45444
No 67
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=98.28 E-value=5e-06 Score=85.47 Aligned_cols=48 Identities=23% Similarity=0.351 Sum_probs=38.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcC--CcccCceEE
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACS--LLRQEMKQI 757 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~g--i~~~~~~~~ 757 (928)
++.+.+.++|++|++.|++++++|||....+..+.+.++ ++..++..+
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i 66 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALI 66 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEE
Confidence 477899999999999999999999999999999888743 344444433
No 68
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.26 E-value=6e-06 Score=84.96 Aligned_cols=125 Identities=22% Similarity=0.221 Sum_probs=87.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.|++++.++.|+++ +++.++||.....+..+.+.+|+..--...+....+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------------------------- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------------------
Confidence 3579999999999999 9999999999999999999999842111111110000
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEe-eCcccHHHHHHHHhcCCCEEEEEcCC
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCR-SSPKQKALVTRLVKGTGKTTLAIGDG 868 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r-~~p~qK~~iv~~l~~~g~~vlaiGDG 868 (928)
.+ +... ..|..|..+++.++..+..++|||||
T Consensus 121 --------------------~i---------------------------~~~~~~~p~~k~~~l~~~~~~~~~~v~iGDs 153 (205)
T PRK13582 121 --------------------MI---------------------------TGYDLRQPDGKRQAVKALKSLGYRVIAAGDS 153 (205)
T ss_pred --------------------eE---------------------------ECccccccchHHHHHHHHHHhCCeEEEEeCC
Confidence 00 0001 13567878888776667889999999
Q ss_pred hhcHHHHHhCCeeEEecCCcchhhhhcCcE-eecccccchhh
Q 002392 869 ANDVGMLQEADIGVGISGVEGMQAVMSSDY-AIAQFRFLERL 909 (928)
Q Consensus 869 ~ND~~ml~~A~vGIam~g~e~~~ak~aAD~-vi~~f~~l~~l 909 (928)
.||+.|.+.|++|+.....+.. ....+++ ++.+++.|..+
T Consensus 154 ~~D~~~~~aa~~~v~~~~~~~~-~~~~~~~~~~~~~~el~~~ 194 (205)
T PRK13582 154 YNDTTMLGEADAGILFRPPANV-IAEFPQFPAVHTYDELLAA 194 (205)
T ss_pred HHHHHHHHhCCCCEEECCCHHH-HHhCCcccccCCHHHHHHH
Confidence 9999999999999987554432 2334565 77777766555
No 69
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.23 E-value=1.2e-05 Score=84.31 Aligned_cols=42 Identities=7% Similarity=-0.030 Sum_probs=38.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
+..-+.+.++|++|+++||.++++||+....+..+.+++++-
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 346677999999999999999999999999999999999974
No 70
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.22 E-value=9.1e-06 Score=83.25 Aligned_cols=117 Identities=20% Similarity=0.235 Sum_probs=79.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.+++.+.|+.|++.|+++.++||.....+..+++.+|+..--...+......
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g-------------------------- 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKG-------------------------- 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCC--------------------------
Confidence 589999999999999999999999999999999999999732111111110000
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEE
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 865 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlai 865 (928)
... ...+..+.|..|..+++.+ +..| ..+++|
T Consensus 134 --------------------~~~------------------------p~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~i 169 (201)
T TIGR01491 134 --------------------FIQ------------------------PDGIVRVTFDNKGEAVERLKRELNPSLTETVAV 169 (201)
T ss_pred --------------------eEe------------------------cceeeEEccccHHHHHHHHHHHhCCCHHHEEEE
Confidence 000 0012234456787777766 4433 459999
Q ss_pred cCChhcHHHHHhCCeeEEecCCcchhhhhcCc
Q 002392 866 GDGANDVGMLQEADIGVGISGVEGMQAVMSSD 897 (928)
Q Consensus 866 GDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD 897 (928)
||+.||++|++.||+++++.+... ..+.++|
T Consensus 170 GDs~~D~~~a~~ag~~~a~~~~~~-~~~~a~~ 200 (201)
T TIGR01491 170 GDSKNDLPMFEVADISISLGDEGH-ADYLAKD 200 (201)
T ss_pred cCCHhHHHHHHhcCCeEEECCCcc-chhhccc
Confidence 999999999999999999944322 2444444
No 71
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.21 E-value=1.4e-06 Score=83.36 Aligned_cols=129 Identities=23% Similarity=0.343 Sum_probs=87.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCce--EEEEcCCCchhhHhhhhcchhHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMK--QIVITLDSPDMEALEKQGDKENITKVSLESVT 787 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (928)
.+-+++++.++.|++.|++|.++||--...+..+|.++||...+.. .+.++..
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~------------------------- 142 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKD------------------------- 142 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccC-------------------------
Confidence 3679999999999999999999999999999999999999643211 1111100
Q ss_pred HHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhc--CCCEEEEE
Q 002392 788 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG--TGKTTLAI 865 (928)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~--~g~~vlai 865 (928)
|+-+.. . .--.-+...-|++++..+++ .-+.++||
T Consensus 143 -------------------------Gk~~gf----------d--------~~~ptsdsggKa~~i~~lrk~~~~~~~~mv 179 (227)
T KOG1615|consen 143 -------------------------GKYLGF----------D--------TNEPTSDSGGKAEVIALLRKNYNYKTIVMV 179 (227)
T ss_pred -------------------------Cccccc----------c--------cCCccccCCccHHHHHHHHhCCChheeEEe
Confidence 100000 0 00001122369999999943 23679999
Q ss_pred cCChhcHHHHHhCCeeEEecCCcc-hhhhhcCcEeecccccc
Q 002392 866 GDGANDVGMLQEADIGVGISGVEG-MQAVMSSDYAIAQFRFL 906 (928)
Q Consensus 866 GDG~ND~~ml~~A~vGIam~g~e~-~~ak~aAD~vi~~f~~l 906 (928)
|||+||++|+..|+.=||..|.-. .+.+..|++-+.+|..|
T Consensus 180 GDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~~~f~~L 221 (227)
T KOG1615|consen 180 GDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYVTDFYVL 221 (227)
T ss_pred cCCccccccCCchhhhhccCCceEcHhhHhccHHHHHHHHHH
Confidence 999999999999888777765432 22567777777766544
No 72
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.12 E-value=1.7e-05 Score=80.55 Aligned_cols=39 Identities=26% Similarity=0.259 Sum_probs=36.2
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcc
Q 002392 713 KGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (928)
Q Consensus 713 ~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~ 751 (928)
+++++.|+.++++|++++|+||.....+..+++.+|+..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~ 130 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD 130 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc
Confidence 666699999999999999999999999999999999964
No 73
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.07 E-value=5.9e-06 Score=76.65 Aligned_cols=108 Identities=18% Similarity=0.278 Sum_probs=82.6
Q ss_pred HHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhh
Q 002392 717 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 796 (928)
Q Consensus 717 ~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (928)
-.|+.+.++||++.|+|||+-.-+..=|+++||-.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------------------- 76 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------------------- 76 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------------------
Confidence 58999999999999999999999999999999831
Q ss_pred ccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEEcCChhcH
Q 002392 797 VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDV 872 (928)
Q Consensus 797 ~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlaiGDG~ND~ 872 (928)
+..| -.+|....+.+ ++.+ ..|+++||-.||.
T Consensus 77 -------------~~qG-------------------------------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dl 112 (170)
T COG1778 77 -------------LYQG-------------------------------ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDL 112 (170)
T ss_pred -------------eeec-------------------------------hHhHHHHHHHHHHHhCCCHHHhhhhcCccccH
Confidence 0111 12455555555 4443 4599999999999
Q ss_pred HHHHhCCeeEEecCCcchhhhhcCcEeecc------cccchhhhhhhch
Q 002392 873 GMLQEADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLLLVHGH 915 (928)
Q Consensus 873 ~ml~~A~vGIam~g~e~~~ak~aAD~vi~~------f~~l~~lll~~Gr 915 (928)
|+|+..+.+++..++... .+..||||... ++.+..+ +..++
T Consensus 113 pvm~~vGls~a~~dAh~~-v~~~a~~Vt~~~GG~GAvREv~dl-il~aq 159 (170)
T COG1778 113 PVMEKVGLSVAVADAHPL-LKQRADYVTSKKGGEGAVREVCDL-ILQAQ 159 (170)
T ss_pred HHHHHcCCcccccccCHH-HHHhhHhhhhccCcchHHHHHHHH-HHHcc
Confidence 999999999999777654 78899999883 6666666 44443
No 74
>PLN02954 phosphoserine phosphatase
Probab=98.01 E-value=4.1e-05 Score=79.91 Aligned_cols=41 Identities=22% Similarity=0.444 Sum_probs=38.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.|++.++++.|++.|+++.|+||.....+..+++.+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999999984
No 75
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=97.94 E-value=7.4e-05 Score=77.32 Aligned_cols=140 Identities=12% Similarity=0.118 Sum_probs=86.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
-+++|++.+.++.|++.|+++.|+||.....+..+.+.++... .++...
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~~n~---------------------------- 117 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIYCNE---------------------------- 117 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEEece----------------------------
Confidence 4689999999999999999999999999888888887764321 111000
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceE-EE-eeCcccHHHHHHHHhcCCCEEEEEc
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI-CC-RSSPKQKALVTRLVKGTGKTTLAIG 866 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i-~~-r~~p~qK~~iv~~l~~~g~~vlaiG 866 (928)
+.++|..+... ....... +. .+ ...|..+++.++.....++|||
T Consensus 118 --------------------~~~~~~~~~~~-------------~p~~~~~~~~~~c-g~~K~~~l~~~~~~~~~~i~iG 163 (214)
T TIGR03333 118 --------------------ADFSNEYIHID-------------WPHPCDGTCQNQC-GCCKPSLIRKLSEPNDYHIVIG 163 (214)
T ss_pred --------------------eEeeCCeeEEe-------------CCCCCccccccCC-CCCHHHHHHHHhhcCCcEEEEe
Confidence 01111110000 0000000 00 11 3469999998865667789999
Q ss_pred CChhcHHHHHhCCeeEEecCC-cchhhhhcCcEeecccccchhhhhhh
Q 002392 867 DGANDVGMLQEADIGVGISGV-EGMQAVMSSDYAIAQFRFLERLLLVH 913 (928)
Q Consensus 867 DG~ND~~ml~~A~vGIam~g~-e~~~ak~aAD~vi~~f~~l~~lll~~ 913 (928)
||.||+.|.+.||++++-... +-.+-...+.+.+.+|..+...|-.|
T Consensus 164 Dg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~~ 211 (214)
T TIGR03333 164 DSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELENV 211 (214)
T ss_pred CCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHHHH
Confidence 999999999999998775321 11112233455555677766664433
No 76
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.90 E-value=0.00018 Score=88.31 Aligned_cols=186 Identities=15% Similarity=0.115 Sum_probs=95.3
Q ss_pred CCCChHHHHHHHHH-cCCeEEEEcCCcHhhHHHHHHHcC--CcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHH
Q 002392 711 LQKGVPECIDKLAQ-AGIKVWVLTGDKMETAINIGYACS--LLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 787 (928)
Q Consensus 711 lr~~~~~aI~~l~~-aGIkv~ilTGD~~~ta~~ia~~~g--i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (928)
+.+++.++|++|.+ .|+.|+++|||............+ ++..++..+...+.. +................+.
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~-----w~~~~~~~~~w~~~v~~il 589 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGE-----WQLLEPVATEWKDAVRPIL 589 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCc-----eEECCCcchhHHHHHHHHH
Confidence 56789999999999 699999999999998877765444 333333333221111 0000000000011111111
Q ss_pred HHHHhhhhhccccccccceEEEEEccch----hhHHhHHHHHHHHHHhhccCCceE-----EEeeCc--ccHHHHHHHH-
Q 002392 788 KQIREGISQVNSAKESKVTFGLVIDGKS----LDFALDKKLEKMFLDLAIDCASVI-----CCRSSP--KQKALVTRLV- 855 (928)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~vi~g~~----l~~~~~~~~~~~~~~~~~~~~~~i-----~~r~~p--~qK~~iv~~l- 855 (928)
..... .............+...-.. +......++...+..........+ +..+.| -+|+..++.+
T Consensus 590 ~~~~~---~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll 666 (726)
T PRK14501 590 EEFVD---RTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLL 666 (726)
T ss_pred HHHHh---cCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHH
Confidence 11111 01111111111223332111 111111223333333221111111 223334 4899999998
Q ss_pred hcC-CCEEEEEcCChhcHHHHHhC---CeeEEecCCcchhhhhcCcEeecccccchhh
Q 002392 856 KGT-GKTTLAIGDGANDVGMLQEA---DIGVGISGVEGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 856 ~~~-g~~vlaiGDG~ND~~ml~~A---~vGIam~g~e~~~ak~aAD~vi~~f~~l~~l 909 (928)
+.. ...++++||+.||.+||+.+ +.+|+|++. +.+|+|.+.+-..+..+
T Consensus 667 ~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~-----~s~A~~~l~~~~eV~~~ 719 (726)
T PRK14501 667 EAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG-----ESRARYRLPSQREVREL 719 (726)
T ss_pred hcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC-----CCcceEeCCCHHHHHHH
Confidence 422 25799999999999999997 578888553 45799999875544433
No 77
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.83 E-value=5.7e-05 Score=77.45 Aligned_cols=110 Identities=12% Similarity=0.050 Sum_probs=76.1
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHH
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 787 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (928)
..++.+++.+.|+.+++.|++++++||-....+..+++.+|+..--...+....+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g------------------------ 140 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG------------------------ 140 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC------------------------
Confidence 45689999999999999999999999999999999999999842100000000000
Q ss_pred HHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEE
Q 002392 788 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTL 863 (928)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vl 863 (928)
.++|... --.+.++.|...++.+ +..+ ..++
T Consensus 141 ----------------------~~~g~~~-----------------------~~~~~g~~K~~~l~~~~~~~~~~~~~~~ 175 (202)
T TIGR01490 141 ----------------------IYTGNID-----------------------GNNCKGEGKVHALAELLAEEQIDLKDSY 175 (202)
T ss_pred ----------------------EEeCCcc-----------------------CCCCCChHHHHHHHHHHHHcCCCHHHcE
Confidence 1111100 0012345677777666 4444 3689
Q ss_pred EEcCChhcHHHHHhCCeeEEecC
Q 002392 864 AIGDGANDVGMLQEADIGVGISG 886 (928)
Q Consensus 864 aiGDG~ND~~ml~~A~vGIam~g 886 (928)
++||+.+|++|++.|+.++++..
T Consensus 176 ~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 176 AYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred eeeCCcccHHHHHhCCCcEEeCC
Confidence 99999999999999999999854
No 78
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.79 E-value=6.8e-05 Score=70.99 Aligned_cols=44 Identities=25% Similarity=0.279 Sum_probs=40.2
Q ss_pred ecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 707 ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
-..++.+++.+.|+.|++.|++++++||+....+...++.+|+.
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 34588999999999999999999999999999999999999874
No 79
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.75 E-value=0.00012 Score=73.23 Aligned_cols=40 Identities=20% Similarity=0.189 Sum_probs=37.5
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
+++++.+.++.+++.|++++++||.....+..++..+|+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 5799999999999999999999999999999999999874
No 80
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.74 E-value=0.00023 Score=73.95 Aligned_cols=135 Identities=13% Similarity=0.123 Sum_probs=82.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
+++||+.+.++.|++.|+++.|+||-....+..+.+.+ +.. ..++....
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~---------------------------- 122 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGS---------------------------- 122 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEE----------------------------
Confidence 68999999999999999999999999998888888887 532 11111100
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEE--eeCcccHHHHHHHHhcCCCEEEEEcC
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICC--RSSPKQKALVTRLVKGTGKTTLAIGD 867 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~--r~~p~qK~~iv~~l~~~g~~vlaiGD 867 (928)
.++|+.+... ........+ ++ ...|..+++.++.....+++|||
T Consensus 123 --------------------~~~~~~~~~~-------------kp~p~~~~~~~~~-~~~K~~~l~~~~~~~~~~i~iGD 168 (219)
T PRK09552 123 --------------------DFSGEYITIT-------------WPHPCDEHCQNHC-GCCKPSLIRKLSDTNDFHIVIGD 168 (219)
T ss_pred --------------------EecCCeeEEe-------------ccCCccccccccC-CCchHHHHHHhccCCCCEEEEeC
Confidence 0111100000 000000000 01 12478888888555668999999
Q ss_pred ChhcHHHHHhCCeeEEecCC-cchhhhhcCcEeecccccchhh
Q 002392 868 GANDVGMLQEADIGVGISGV-EGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 868 G~ND~~ml~~A~vGIam~g~-e~~~ak~aAD~vi~~f~~l~~l 909 (928)
|.||+.|.+.||+.++-... +..+....+.+.+.+|..+...
T Consensus 169 s~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~~~f~ei~~~ 211 (219)
T PRK09552 169 SITDLEAAKQADKVFARDFLITKCEELGIPYTPFETFHDVQTE 211 (219)
T ss_pred CHHHHHHHHHCCcceeHHHHHHHHHHcCCCccccCCHHHHHHH
Confidence 99999999999997773210 1100122355555666665554
No 81
>PLN02580 trehalose-phosphatase
Probab=97.68 E-value=0.00099 Score=73.63 Aligned_cols=232 Identities=15% Similarity=0.185 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHHHhhhccccHHHHHHHHHHHh---------hcCceEEEEeeeccc----CCCChHHHHHHHHHcCCeE
Q 002392 663 EDEYRIWEKEFLKAKTSVTSDREALVASAAEKI---------ERDLILLGATAVEDK----LQKGVPECIDKLAQAGIKV 729 (928)
Q Consensus 663 ~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~i---------E~~l~llG~~~ieD~----lr~~~~~aI~~l~~aGIkv 729 (928)
+++|..|..++..|...+ +.+...- .-|.+|.-++ .|| +-+++.++++.|.+. ..|
T Consensus 91 ~~~~~~~~~~~p~al~~~--------~~~~~~~~~k~~~LfLDyDGTLaPIv--~~Pd~A~~s~~~~~aL~~La~~-~~V 159 (384)
T PLN02580 91 DFAYRTWMLKYPSALTSF--------EQIANFAKGKKIALFLDYDGTLSPIV--DDPDRALMSDAMRSAVKNVAKY-FPT 159 (384)
T ss_pred hHHHHHHHHhCcHHHHHH--------HHHHHHhhcCCeEEEEecCCccCCCC--CCcccccCCHHHHHHHHHHhhC-CCE
Confidence 567889999888777655 1111111 1233333322 233 457889999999887 489
Q ss_pred EEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCC--chhhHhh-------hhcch----hH-HH-HHHHHHHHHHHHhhh
Q 002392 730 WVLTGDKMETAINIGYACSLLRQEMKQIVITLDS--PDMEALE-------KQGDK----EN-IT-KVSLESVTKQIREGI 794 (928)
Q Consensus 730 ~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~--~~~~~~~-------~~~~~----~~-~~-~~~~~~~~~~~~~~~ 794 (928)
+|+|||..........-.++.--+.+...+.+.. .....+. .+... +. .. ......+...+....
T Consensus 160 AIVSGR~~~~L~~~l~~~~l~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~ 239 (384)
T PLN02580 160 AIISGRSRDKVYELVGLTELYYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVEST 239 (384)
T ss_pred EEEeCCCHHHHHHHhCCCCccEEEeCCceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHh
Confidence 9999999999877764444321111111111100 0000000 00000 00 00 000112222222212
Q ss_pred hhccccccccceEEEEEccchhhHHhH----HHHHHHHHHhh----ccCCceEEEeeCc---ccHHHHHHHH-hcCC---
Q 002392 795 SQVNSAKESKVTFGLVIDGKSLDFALD----KKLEKMFLDLA----IDCASVICCRSSP---KQKALVTRLV-KGTG--- 859 (928)
Q Consensus 795 ~~~~~~~~~~~~~~~vi~g~~l~~~~~----~~~~~~~~~~~----~~~~~~i~~r~~p---~qK~~iv~~l-~~~g--- 859 (928)
.......-....+++.+.-........ ..+........ ...+. +..+.| .+|+..++.+ +..|
T Consensus 240 ~~~pGs~VE~K~~svavHYR~a~~~~~~~~~~~l~~~l~~~~~l~v~~Gk~--vlEVrP~~g~~KG~Av~~Ll~~~g~~~ 317 (384)
T PLN02580 240 KDIKGAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDVLKKYPRLRLTHGRK--VLEVRPVIDWNKGKAVEFLLESLGLSN 317 (384)
T ss_pred ccCCCCEEEecCcEEEEEeCCCCchHHHHHHHHHHHHHHhCCceEEEeCCe--EEEEecCCCCCHHHHHHHHHHhcCCCc
Confidence 222222223344555555433322211 12222221111 11122 234455 4999999988 5554
Q ss_pred --C-EEEEEcCChhcHHHHHh-----CCeeEEecCCcchhhhhcCcEeecccccchhhh
Q 002392 860 --K-TTLAIGDGANDVGMLQE-----ADIGVGISGVEGMQAVMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 860 --~-~vlaiGDG~ND~~ml~~-----A~vGIam~g~e~~~ak~aAD~vi~~f~~l~~ll 910 (928)
. .+++|||+.||..||+. +++||+|++... .-.|+|.|.+-..+..+|
T Consensus 318 ~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~---~t~A~y~L~dp~eV~~~L 373 (384)
T PLN02580 318 CDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK---ESNAFYSLRDPSEVMEFL 373 (384)
T ss_pred ccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC---CccceEEcCCHHHHHHHH
Confidence 1 25999999999999996 589999975432 236889998866655553
No 82
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.66 E-value=0.00024 Score=71.81 Aligned_cols=42 Identities=14% Similarity=0.075 Sum_probs=38.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
-++.+++.+.++.|++.|+++.++|+.....+..+.+..|+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK 112 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh
Confidence 478999999999999999999999999999999998888874
No 83
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.65 E-value=0.00024 Score=74.27 Aligned_cols=123 Identities=25% Similarity=0.276 Sum_probs=81.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
-++.+++.++++.|++.|++++++||.....+..+.+..|+...-..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 138 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSV--------------------------------- 138 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccE---------------------------------
Confidence 46889999999999999999999999999999899988887422110
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcc--cHHHHHHHHhcCCCEEEEEc
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPK--QKALVTRLVKGTGKTTLAIG 866 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~--qK~~iv~~l~~~g~~vlaiG 866 (928)
++.++. + ....|. --..+.+.+......+++||
T Consensus 139 ---------------------~~~~~~-----------------------~-~~~kp~~~~~~~~~~~~~~~~~~~i~ig 173 (226)
T PRK13222 139 ---------------------VIGGDS-----------------------L-PNKKPDPAPLLLACEKLGLDPEEMLFVG 173 (226)
T ss_pred ---------------------EEcCCC-----------------------C-CCCCcChHHHHHHHHHcCCChhheEEEC
Confidence 000000 0 011121 11122222322335799999
Q ss_pred CChhcHHHHHhCCe-eEEec-CC--cchhhhhcCcEeecccccchhh
Q 002392 867 DGANDVGMLQEADI-GVGIS-GV--EGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 867 DG~ND~~ml~~A~v-GIam~-g~--e~~~ak~aAD~vi~~f~~l~~l 909 (928)
|+.+|+.|.+.||+ +|++. |. ........+++++.++..|...
T Consensus 174 D~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 220 (226)
T PRK13222 174 DSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPL 220 (226)
T ss_pred CCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHH
Confidence 99999999999999 66663 21 1111345689999888887766
No 84
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.59 E-value=0.00032 Score=72.88 Aligned_cols=126 Identities=23% Similarity=0.165 Sum_probs=85.7
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHH
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 787 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (928)
+..+-+++++++..|+++|++..++|+++...+..+.+..|+...-..++. +.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g--~~------------------------- 139 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG--GD------------------------- 139 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc--CC-------------------------
Confidence 567889999999999999999999999999999999999998543211111 00
Q ss_pred HHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcC
Q 002392 788 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGD 867 (928)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGD 867 (928)
. .......|.....+.+.+......++||||
T Consensus 140 ---------------------------~----------------------~~~~KP~P~~l~~~~~~~~~~~~~~l~VGD 170 (220)
T COG0546 140 ---------------------------D----------------------VPPPKPDPEPLLLLLEKLGLDPEEALMVGD 170 (220)
T ss_pred ---------------------------C----------------------CCCCCcCHHHHHHHHHHhCCChhheEEECC
Confidence 0 000112233333344444222247999999
Q ss_pred ChhcHHHHHhCC---eeEEecCC-cchhhhhcCcEeecccccchhh
Q 002392 868 GANDVGMLQEAD---IGVGISGV-EGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 868 G~ND~~ml~~A~---vGIam~g~-e~~~ak~aAD~vi~~f~~l~~l 909 (928)
..+|+.|=+.|| |||..+.. ........+|+++.++..|...
T Consensus 171 s~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~ 216 (220)
T COG0546 171 SLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLAL 216 (220)
T ss_pred CHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHH
Confidence 999999999999 44544322 2222456699999998877665
No 85
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.59 E-value=0.00026 Score=72.72 Aligned_cols=41 Identities=29% Similarity=0.362 Sum_probs=37.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.++|+.|+++|+++.++||.....+..+.+..|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 68899999999999999999999999988888888888874
No 86
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.50 E-value=0.00038 Score=73.56 Aligned_cols=167 Identities=16% Similarity=0.160 Sum_probs=81.5
Q ss_pred HHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhh-Hh-hhhcchhHHHH-HHHHHHHHHHHhhhhhcc
Q 002392 722 LAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDME-AL-EKQGDKENITK-VSLESVTKQIREGISQVN 798 (928)
Q Consensus 722 l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~-~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 798 (928)
..+.++.++++|||+...+..+.++.++..++ .++.-.|...... .. ....-...+.. ...+.+..-+........
T Consensus 31 ~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd-~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~ 109 (247)
T PF05116_consen 31 QARPEILFVYVTGRSLESVLRLLREYNLPQPD-YIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAELPGLRP 109 (247)
T ss_dssp HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-S-EEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEE
T ss_pred hhCCCceEEEECCCCHHHHHHHHHhCCCCCCC-EEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhhCccc
Confidence 44778999999999999999999999986543 2222222211110 00 00000011111 011111111111111011
Q ss_pred ccc--cccceEEEEEccchhhHHhHHHHHHHHHHhhccCCce----EEEeeCc--ccHHHHHHHH-hcCC---CEEEEEc
Q 002392 799 SAK--ESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASV----ICCRSSP--KQKALVTRLV-KGTG---KTTLAIG 866 (928)
Q Consensus 799 ~~~--~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~----i~~r~~p--~qK~~iv~~l-~~~g---~~vlaiG 866 (928)
... ....+.+..++.......+ +++...+......++.+ -+..+-| ..|...++.+ ++.+ ..|+++|
T Consensus 110 q~~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~aG 188 (247)
T PF05116_consen 110 QPESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVAG 188 (247)
T ss_dssp GGCCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEEE
T ss_pred CCccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEEe
Confidence 111 1123444555554443322 23333333322222211 1233334 4899999999 5444 4689999
Q ss_pred CChhcHHHHHhCCeeEEecCCcch
Q 002392 867 DGANDVGMLQEADIGVGISGVEGM 890 (928)
Q Consensus 867 DG~ND~~ml~~A~vGIam~g~e~~ 890 (928)
|+.||.+||..++-||.++|+...
T Consensus 189 DSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 189 DSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp SSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred CCCCcHHHHcCcCCEEEEcCCCHH
Confidence 999999999999999999887653
No 87
>PLN02423 phosphomannomutase
Probab=97.48 E-value=0.00046 Score=72.84 Aligned_cols=49 Identities=18% Similarity=0.335 Sum_probs=39.2
Q ss_pred EEeeCcc--cHHHHHHHHhcCCCEEEEEcC----ChhcHHHHHh-CCeeEEecCCcc
Q 002392 840 CCRSSPK--QKALVTRLVKGTGKTTLAIGD----GANDVGMLQE-ADIGVGISGVEG 889 (928)
Q Consensus 840 ~~r~~p~--qK~~iv~~l~~~g~~vlaiGD----G~ND~~ml~~-A~vGIam~g~e~ 889 (928)
+..+.|. +|+..++.+. ....|+|||| |.||++||+. -=.|+.+++.+.
T Consensus 180 ~iDi~~~gvnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 180 SFDVFPQGWDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred EEEEeeCCCCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 3444443 7999999998 6678999999 8999999997 455889877644
No 88
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.43 E-value=0.00061 Score=73.22 Aligned_cols=41 Identities=12% Similarity=0.182 Sum_probs=36.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
.++.+++.++|+.|+++|++++|+||.+...+..+....|+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 46889999999999999999999999988888888777776
No 89
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=97.43 E-value=0.0018 Score=68.41 Aligned_cols=67 Identities=9% Similarity=0.043 Sum_probs=50.2
Q ss_pred EEeeCcccHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhC--------CeeEEecCCcchhhhhcCcEeecccccch
Q 002392 840 CCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEA--------DIGVGISGVEGMQAVMSSDYAIAQFRFLE 907 (928)
Q Consensus 840 ~~r~~p~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A--------~vGIam~g~e~~~ak~aAD~vi~~f~~l~ 907 (928)
-.+..+.+|...++.+ +..+ ..++++||+.||..|++.+ +.||.|...+ .+..|++++.+...+.
T Consensus 160 e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~---~~~~A~~~~~~~~~v~ 236 (244)
T TIGR00685 160 ELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS---KKTVAKFHLTGPQQVL 236 (244)
T ss_pred EEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC---cCCCceEeCCCHHHHH
Confidence 3345556899999888 5544 4799999999999999999 4777774112 4667999999877665
Q ss_pred hh
Q 002392 908 RL 909 (928)
Q Consensus 908 ~l 909 (928)
.+
T Consensus 237 ~~ 238 (244)
T TIGR00685 237 EF 238 (244)
T ss_pred HH
Confidence 55
No 90
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.37 E-value=0.0007 Score=69.97 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=37.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.++++.|+++|+++.++|+.....+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 58899999999999999999999999988899998888874
No 91
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=97.33 E-value=0.0069 Score=74.72 Aligned_cols=201 Identities=13% Similarity=0.109 Sum_probs=99.6
Q ss_pred CceEEEEeeecccCCCChHHHHHHH-HHcCCeEEEEcCCcHhhHHHHHHH---cCCcccCceEEEEcCCCchhhHhhhhc
Q 002392 698 DLILLGATAVEDKLQKGVPECIDKL-AQAGIKVWVLTGDKMETAINIGYA---CSLLRQEMKQIVITLDSPDMEALEKQG 773 (928)
Q Consensus 698 ~l~llG~~~ieD~lr~~~~~aI~~l-~~aGIkv~ilTGD~~~ta~~ia~~---~gi~~~~~~~~~i~~~~~~~~~~~~~~ 773 (928)
|.||+-.....-.+-+++.+++++| ++.|+.|+++|||...+....... ++++.+++..+...+...... .. .
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~-~~--~ 680 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWET-CV--P 680 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeee-cc--h
Confidence 4445433222234567899999997 788999999999999998877644 345555554443332211100 00 0
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHh----HHHHHHHHHHhhccC-------CceEEEe
Q 002392 774 DKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFAL----DKKLEKMFLDLAIDC-------ASVICCR 842 (928)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~----~~~~~~~~~~~~~~~-------~~~i~~r 842 (928)
..+.........+.... ....+...-......++.+-...+.-. ..++..++....... +.++=.+
T Consensus 681 ~~~~~w~~~v~~i~~~y---~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~ 757 (854)
T PLN02205 681 VADCSWKQIAEPVMQLY---TETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVK 757 (854)
T ss_pred hhhHHHHHHHHHHHHHH---hcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEE
Confidence 00000010111111110 000111111222344444432221110 112222222221111 1112222
Q ss_pred eCcccHHHHHHHH-hc---CC---CEEEEEcCChhcHHHHHhCC--------------eeEEecCCcchhhhhcCcEeec
Q 002392 843 SSPKQKALVTRLV-KG---TG---KTTLAIGDGANDVGMLQEAD--------------IGVGISGVEGMQAVMSSDYAIA 901 (928)
Q Consensus 843 ~~p~qK~~iv~~l-~~---~g---~~vlaiGDG~ND~~ml~~A~--------------vGIam~g~e~~~ak~aAD~vi~ 901 (928)
..--.|+..++.+ +. .| ..+++|||+.||..||+.++ ++|.++.. .-.|.|-+.
T Consensus 758 p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~-----~S~A~y~L~ 832 (854)
T PLN02205 758 PQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQK-----PSKAKYYLD 832 (854)
T ss_pred eCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCC-----CccCeEecC
Confidence 3334799999888 22 23 37999999999999999986 44555332 235678777
Q ss_pred ccccchhh
Q 002392 902 QFRFLERL 909 (928)
Q Consensus 902 ~f~~l~~l 909 (928)
+-..+..+
T Consensus 833 d~~eV~~l 840 (854)
T PLN02205 833 DTAEIVRL 840 (854)
T ss_pred CHHHHHHH
Confidence 76655555
No 92
>PLN03017 trehalose-phosphatase
Probab=97.29 E-value=0.0057 Score=67.09 Aligned_cols=230 Identities=14% Similarity=0.099 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHHhhhccccHHHHHHHHHHHh---------hcCceEEEEeeecc--cCCCChHHHHHHHHHcCCeEEE
Q 002392 663 EDEYRIWEKEFLKAKTSVTSDREALVASAAEKI---------ERDLILLGATAVED--KLQKGVPECIDKLAQAGIKVWV 731 (928)
Q Consensus 663 ~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~i---------E~~l~llG~~~ieD--~lr~~~~~aI~~l~~aGIkv~i 731 (928)
.+++..|..++..|...+ +.+.... .-|.+|+-++.-.| .+-+++.++|++|. .|+++++
T Consensus 83 ~~~~~~w~~~~psal~~~--------~~~~~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaI 153 (366)
T PLN03017 83 QQQLNSWIMQHPSALEMF--------EQIMEASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAI 153 (366)
T ss_pred hhhhhHHHhhCChHHHHH--------HHHHHHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEE
Confidence 456777877776555443 2222211 12444443333333 37789999999999 7899999
Q ss_pred EcCCcHhhHHHHHHHcCCcccCceEEEEcCCCch-----hhHhhhhc--c-hhHH--HHHHHHHHHHHHHhhhhhccccc
Q 002392 732 LTGDKMETAINIGYACSLLRQEMKQIVITLDSPD-----MEALEKQG--D-KENI--TKVSLESVTKQIREGISQVNSAK 801 (928)
Q Consensus 732 lTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~-----~~~~~~~~--~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 801 (928)
+|||....+..+. ++ .+..++..+|.... ........ . .+.. .......+...+...........
T Consensus 154 vSGR~~~~l~~~~---~l--~~l~l~g~hGa~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~ 228 (366)
T PLN03017 154 VTGRCIDKVYNFV---KL--AELYYAGSHGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAK 228 (366)
T ss_pred EeCCCHHHHHHhh---cc--cCceEEEcCCcEEecCCCcceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCE
Confidence 9999999988773 22 11222232332100 00000000 0 0000 00111222222222222222222
Q ss_pred cccceEEEEEccchhhHHhHHHHHHHHHHhhc--------cCCceEEEeeC-cccHHHHHHHH-hcCC------CEEEEE
Q 002392 802 ESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI--------DCASVICCRSS-PKQKALVTRLV-KGTG------KTTLAI 865 (928)
Q Consensus 802 ~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~--------~~~~~i~~r~~-p~qK~~iv~~l-~~~g------~~vlai 865 (928)
-....+++.+.-.......-.++...+..... ..+.++=.|.. ..+|+..++.+ +..+ ..++++
T Consensus 229 VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyi 308 (366)
T PLN03017 229 VENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYI 308 (366)
T ss_pred EEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEe
Confidence 23344555555443332211122222222211 12223323332 34999999988 5443 368999
Q ss_pred cCChhcHHHHHhC-----CeeEEecCCcchhhhhcCcEeecccccchhh
Q 002392 866 GDGANDVGMLQEA-----DIGVGISGVEGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 866 GDG~ND~~ml~~A-----~vGIam~g~e~~~ak~aAD~vi~~f~~l~~l 909 (928)
||...|-.|++.. ++||.++.... .-.|+|.|.+-..+..+
T Consensus 309 GDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L~dp~eV~~f 354 (366)
T PLN03017 309 GDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSLQDPSEVMDF 354 (366)
T ss_pred CCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeCCCHHHHHHH
Confidence 9999999999876 35555542222 24689999876555444
No 93
>PRK08238 hypothetical protein; Validated
Probab=97.22 E-value=0.0014 Score=75.48 Aligned_cols=40 Identities=18% Similarity=0.141 Sum_probs=38.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
++++++.+.|++++++|++++++|+-+...+..+++.+|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl 111 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL 111 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999999999997
No 94
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.22 E-value=0.0013 Score=68.81 Aligned_cols=41 Identities=22% Similarity=0.077 Sum_probs=36.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.|++.+.++.|++.|+++.++|+.+...+..+.+..|+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 57899999999999999999999999888777777777773
No 95
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.21 E-value=0.0012 Score=68.38 Aligned_cols=41 Identities=20% Similarity=0.052 Sum_probs=37.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.++++.|+++|+++.++||.....+..+.+..|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 37899999999999999999999999998888888888884
No 96
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.21 E-value=0.0022 Score=68.72 Aligned_cols=41 Identities=15% Similarity=0.173 Sum_probs=38.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.|++.++++.|+++|+++.|+|+.....+..+.+.+|+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999999999984
No 97
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.17 E-value=0.0018 Score=68.86 Aligned_cols=121 Identities=12% Similarity=0.180 Sum_probs=81.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.+++.++|+.|+++|+++.|+|+.....+..+.+.+|+...-..+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~i--------------------------------- 155 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVV--------------------------------- 155 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEE---------------------------------
Confidence 56899999999999999999999999999998888888874321111
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCC---CEEEEEc
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTG---KTTLAIG 866 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g---~~vlaiG 866 (928)
+.+... .+..|. -..+...+++.| ..+++||
T Consensus 156 ---------------------i~~~d~------------------------~~~KP~-Pe~~~~a~~~l~~~p~~~l~Ig 189 (260)
T PLN03243 156 ---------------------LAAEDV------------------------YRGKPD-PEMFMYAAERLGFIPERCIVFG 189 (260)
T ss_pred ---------------------EecccC------------------------CCCCCC-HHHHHHHHHHhCCChHHeEEEc
Confidence 111100 001121 112222233333 4699999
Q ss_pred CChhcHHHHHhCCeeE-EecCCcchhhhhcCcEeecccccchhh
Q 002392 867 DGANDVGMLQEADIGV-GISGVEGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 867 DG~ND~~ml~~A~vGI-am~g~e~~~ak~aAD~vi~~f~~l~~l 909 (928)
|..+|+.+=+.||+-+ ++.|.........+|+++.+++.|...
T Consensus 190 Ds~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~ 233 (260)
T PLN03243 190 NSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVV 233 (260)
T ss_pred CCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHH
Confidence 9999999999999954 665443222334589999988776555
No 98
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.04 E-value=0.0034 Score=64.51 Aligned_cols=108 Identities=15% Similarity=0.135 Sum_probs=73.6
Q ss_pred cCCCChHHHHH-HHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 710 KLQKGVPECID-KLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 710 ~lr~~~~~aI~-~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
.+.|++.++|+ .+++.|++++|+|+-....+..+|+..++.... .++...-+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le-------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIE-------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeE--------------------------
Confidence 57899999996 788899999999999999999999986664321 12211100
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCCCEEEEEcC
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGD 867 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g~~vlaiGD 867 (928)
+.+|.. +.-..|-.+.|..-++.. ........|-||
T Consensus 147 ---------------------~~~gg~----------------------~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsD 183 (210)
T TIGR01545 147 ---------------------RGNGGW----------------------VLPLRCLGHEKVAQLEQKIGSPLKLYSGYSD 183 (210)
T ss_pred ---------------------EeCCce----------------------EcCccCCChHHHHHHHHHhCCChhheEEecC
Confidence 001100 011124455777766544 322345679999
Q ss_pred ChhcHHHHHhCCeeEEecCC
Q 002392 868 GANDVGMLQEADIGVGISGV 887 (928)
Q Consensus 868 G~ND~~ml~~A~vGIam~g~ 887 (928)
+.||.|||+.||.+++++..
T Consensus 184 S~~D~pmL~~a~~~~~Vnp~ 203 (210)
T TIGR01545 184 SKQDNPLLAFCEHRWRVSKR 203 (210)
T ss_pred CcccHHHHHhCCCcEEECcc
Confidence 99999999999999999544
No 99
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.03 E-value=0.002 Score=67.13 Aligned_cols=42 Identities=17% Similarity=0.180 Sum_probs=38.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
-++-|++.++|+.|++.|+++.++||.....+..+.+..|+.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 132 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR 132 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch
Confidence 467899999999999999999999999988888888888874
No 100
>PRK11590 hypothetical protein; Provisional
Probab=97.01 E-value=0.0032 Score=64.93 Aligned_cols=109 Identities=14% Similarity=0.101 Sum_probs=75.2
Q ss_pred cCCCChHHHH-HHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 710 KLQKGVPECI-DKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 710 ~lr~~~~~aI-~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
.+.|++.+.| +.+++.|++++++|+-...-+..++..+|+.. ...++...-+
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~-------------------------- 147 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQ-------------------------- 147 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEE--------------------------
Confidence 4589999999 57888999999999999999999999988632 1122221100
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCCCEEEEEcC
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGD 867 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g~~vlaiGD 867 (928)
...+|.. ....|..+.|..-++.. ........|-||
T Consensus 148 --------------------~~~tg~~-----------------------~g~~c~g~~K~~~l~~~~~~~~~~~~aY~D 184 (211)
T PRK11590 148 --------------------RRYGGWV-----------------------LTLRCLGHEKVAQLERKIGTPLRLYSGYSD 184 (211)
T ss_pred --------------------EEEccEE-----------------------CCccCCChHHHHHHHHHhCCCcceEEEecC
Confidence 0111111 11124456777766644 333346689999
Q ss_pred ChhcHHHHHhCCeeEEecCCc
Q 002392 868 GANDVGMLQEADIGVGISGVE 888 (928)
Q Consensus 868 G~ND~~ml~~A~vGIam~g~e 888 (928)
+.||+|||+.|+.+++++...
T Consensus 185 s~~D~pmL~~a~~~~~vnp~~ 205 (211)
T PRK11590 185 SKQDNPLLYFCQHRWRVTPRG 205 (211)
T ss_pred CcccHHHHHhCCCCEEECccH
Confidence 999999999999999996543
No 101
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=96.85 E-value=0.00084 Score=54.50 Aligned_cols=46 Identities=17% Similarity=0.104 Sum_probs=39.1
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcc
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFS 96 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~ 96 (928)
.++|+.+||.|.+..++.+.++ +.+++||.+|+.++++++++++++
T Consensus 16 v~~r~~~~G~N~l~~~~~~s~~---~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 16 AARRLERYGPNELPPPKKRSPL---LRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4577889999999988744443 889999999999999999999886
No 102
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.83 E-value=0.0049 Score=65.12 Aligned_cols=46 Identities=20% Similarity=0.292 Sum_probs=41.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCce
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMK 755 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~ 755 (928)
+++||+.+.++.|++.|+++.++||-....+..+.+++|+..++..
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~ 166 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVK 166 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCce
Confidence 4799999999999999999999999999999999999998655433
No 103
>PRK11587 putative phosphatase; Provisional
Probab=96.81 E-value=0.0066 Score=62.98 Aligned_cols=40 Identities=20% Similarity=0.198 Sum_probs=33.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
++.||+.++|+.|+++|+++.++|+.....+...-+..|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999877666555555665
No 104
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.79 E-value=0.0043 Score=64.44 Aligned_cols=42 Identities=26% Similarity=0.200 Sum_probs=38.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.++.+|+.+.++.|++.|+++.++||-....+..+.+..|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 479999999999999999999999999999999988888874
No 105
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.78 E-value=0.0068 Score=67.22 Aligned_cols=41 Identities=17% Similarity=0.156 Sum_probs=38.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.+.+|+.+.++.|+++|+++.++|+.....+..+-+..||.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~ 256 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR 256 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH
Confidence 47799999999999999999999999999999999988884
No 106
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.78 E-value=0.0072 Score=58.89 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=31.7
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHH
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAI 741 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~ 741 (928)
+|.+.+++++++++++++|++++++|||+...+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999999998874
No 107
>PLN02151 trehalose-phosphatase
Probab=96.71 E-value=0.037 Score=60.63 Aligned_cols=234 Identities=16% Similarity=0.135 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHhhhccccHHHHHHHHHHHhh---------cCceEEEEeeeccc--CCCChHHHHHHHHHcCCeEEEE
Q 002392 664 DEYRIWEKEFLKAKTSVTSDREALVASAAEKIE---------RDLILLGATAVEDK--LQKGVPECIDKLAQAGIKVWVL 732 (928)
Q Consensus 664 ~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE---------~~l~llG~~~ieD~--lr~~~~~aI~~l~~aGIkv~il 732 (928)
++|..|..++..|...+ +....... -|.+|+-+.---|. +-+++.++|+.|. ++..++++
T Consensus 71 ~~~~~w~~~~p~a~~~~--------~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIv 141 (354)
T PLN02151 71 NKQSCWIKEHPSALNMF--------EEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIV 141 (354)
T ss_pred hhHHHHHHhCChHHHHH--------HHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEE
Confidence 57888998887776544 22222222 13333322222233 5678899999999 56899999
Q ss_pred cCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhc---chhH-H-HHHHHHHHHHHHHhhhhhccccccccceE
Q 002392 733 TGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQG---DKEN-I-TKVSLESVTKQIREGISQVNSAKESKVTF 807 (928)
Q Consensus 733 TGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~---~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 (928)
|||.......+..-.++.--+.+-..+.+.... ..+.... .... . .......+...+.......+...-....+
T Consensus 142 SGR~~~~l~~~~~~~~l~laGsHG~e~~~p~~g-~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~ 220 (354)
T PLN02151 142 SGRCREKVSSFVKLTELYYAGSHGMDIKGPEQG-SKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKF 220 (354)
T ss_pred ECCCHHHHHHHcCCccceEEEeCCceeecCCCC-ccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCc
Confidence 999999887776433321111111111111000 0000000 0000 0 00111122222221111222222233345
Q ss_pred EEEEccchhhHHhHHHHHHHHHHhhc--------cCCceEEEeeC-cccHHHHHHHH-hcCC------CEEEEEcCChhc
Q 002392 808 GLVIDGKSLDFALDKKLEKMFLDLAI--------DCASVICCRSS-PKQKALVTRLV-KGTG------KTTLAIGDGAND 871 (928)
Q Consensus 808 ~~vi~g~~l~~~~~~~~~~~~~~~~~--------~~~~~i~~r~~-p~qK~~iv~~l-~~~g------~~vlaiGDG~ND 871 (928)
++.+.-.........++...+..+.. ..+.++=.|.. ..+|+..++.+ +..+ ..++++||-..|
T Consensus 221 slavHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TD 300 (354)
T PLN02151 221 CASVHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTD 300 (354)
T ss_pred EEEEEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcH
Confidence 55555433322110112222222211 12233333432 34999999988 5433 258999999999
Q ss_pred HHHHHhC-----CeeEEecCCcchhhhhcCcEeecccccchhhh
Q 002392 872 VGMLQEA-----DIGVGISGVEGMQAVMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 872 ~~ml~~A-----~vGIam~g~e~~~ak~aAD~vi~~f~~l~~ll 910 (928)
-.|++.. |+||-++.... .-.|+|.|.+-..+..+|
T Consensus 301 EDaF~~L~~~~~G~gI~Vg~~~k---~T~A~y~L~dp~eV~~~L 341 (354)
T PLN02151 301 EDAFKILRDKKQGLGILVSKYAK---ETNASYSLQEPDEVMEFL 341 (354)
T ss_pred HHHHHHHhhcCCCccEEeccCCC---CCcceEeCCCHHHHHHHH
Confidence 9999864 56665542111 236899999866655553
No 108
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.68 E-value=0.0074 Score=64.21 Aligned_cols=41 Identities=29% Similarity=0.218 Sum_probs=37.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.||+.+.|+.|+++|+++.++||.....+..+.+..|+.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~ 139 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQ 139 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhc
Confidence 46799999999999999999999999999888888888875
No 109
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=96.61 E-value=0.00079 Score=55.56 Aligned_cols=44 Identities=23% Similarity=0.279 Sum_probs=37.0
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVS 94 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~ 94 (928)
.++|+.+||.|.+...+...++ +.+++||.+|+++++++++++|
T Consensus 26 v~~r~~~~G~N~l~~~~~~s~~---~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 26 VEERRKKYGPNELPEPKKKSLW---RIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHHHHHSSSSTTTTTSSSHH---HHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHHHhcccccccccccCcHH---HHHHHHHHhHHHHHHHHHHHHC
Confidence 3577889999999766655544 8999999999999999999886
No 110
>PRK06769 hypothetical protein; Validated
Probab=96.52 E-value=0.013 Score=58.33 Aligned_cols=41 Identities=24% Similarity=0.256 Sum_probs=31.9
Q ss_pred cCceEEEEeeecc----cCCCChHHHHHHHHHcCCeEEEEcCCcH
Q 002392 697 RDLILLGATAVED----KLQKGVPECIDKLAQAGIKVWVLTGDKM 737 (928)
Q Consensus 697 ~~l~llG~~~ieD----~lr~~~~~aI~~l~~aGIkv~ilTGD~~ 737 (928)
.|.++.|-..+.+ ++.|+++++++.|++.|+++.++|+...
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 4556655544443 2689999999999999999999998753
No 111
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.50 E-value=0.012 Score=58.32 Aligned_cols=55 Identities=27% Similarity=0.357 Sum_probs=42.5
Q ss_pred ccHHHHHHHH-hcC--CCEEEEEcCChhcHHHHHhC----CeeEEecCCcchhhhhcCcEeecc
Q 002392 846 KQKALVTRLV-KGT--GKTTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 846 ~qK~~iv~~l-~~~--g~~vlaiGDG~ND~~ml~~A----~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
..|+++++.+ ... ..-.+++||+..|+.||+++ ++.|+.+|++- |..-||..+..
T Consensus 190 g~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvis 251 (315)
T COG4030 190 GEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVIS 251 (315)
T ss_pred cchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEec
Confidence 4677777777 222 23479999999999999998 35567788887 88899998885
No 112
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.47 E-value=0.014 Score=61.85 Aligned_cols=41 Identities=20% Similarity=0.074 Sum_probs=37.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.|++.++++.|++.|+++.|+|+-....+..+.+.+|+.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 148 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS 148 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 47899999999999999999999999999999998888884
No 113
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.45 E-value=0.0078 Score=62.64 Aligned_cols=40 Identities=13% Similarity=0.163 Sum_probs=35.0
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCC----cHhhHHHHHHHcCCc
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGD----KMETAINIGYACSLL 750 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD----~~~ta~~ia~~~gi~ 750 (928)
+.+++++.++.++++|+++.++|++ ...++..+.+.+|+.
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 4455999999999999999999999 667888998889984
No 114
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.42 E-value=0.014 Score=63.27 Aligned_cols=38 Identities=29% Similarity=0.296 Sum_probs=32.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~ 747 (928)
++.|++.+.++.|++.|+++.++|+-....+..+-...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999998877776655444
No 115
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.37 E-value=0.017 Score=60.09 Aligned_cols=40 Identities=13% Similarity=0.186 Sum_probs=34.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCc----HhhHHHHHHHcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDK----METAINIGYACSL 749 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~----~~ta~~ia~~~gi 749 (928)
.+.+++++.|+.+++.|+++.++|||. ..++..+.+..|+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 467889999999999999999999985 4578888887888
No 116
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.36 E-value=0.015 Score=62.32 Aligned_cols=41 Identities=27% Similarity=0.152 Sum_probs=35.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++-||+.++|+.|++.|+++.++||.....+..+.+..|+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 56799999999999999999999999988877777766653
No 117
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.30 E-value=0.017 Score=58.84 Aligned_cols=43 Identities=21% Similarity=0.108 Sum_probs=38.6
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.+++.++++++++.|++.|+++.|+||.+...+..+.+.+|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 4556778899999999999999999999999999999999984
No 118
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.29 E-value=0.021 Score=66.42 Aligned_cols=41 Identities=15% Similarity=0.099 Sum_probs=38.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.||+.+.|+.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~ 370 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD 370 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH
Confidence 68899999999999999999999999999999998888884
No 119
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.29 E-value=0.019 Score=59.54 Aligned_cols=41 Identities=12% Similarity=0.140 Sum_probs=36.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.|++.++|+.|+++|++++++|+-....+....+.+|+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR 134 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH
Confidence 57899999999999999999999999888777777777773
No 120
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.93 E-value=0.016 Score=63.45 Aligned_cols=44 Identities=20% Similarity=0.097 Sum_probs=40.6
Q ss_pred ecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 707 ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
..+++.+++.++|+.|++.|++++++||++...+..+.+.+|+.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 56789999999999999999999999999999999998888874
No 121
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.90 E-value=0.036 Score=52.33 Aligned_cols=41 Identities=22% Similarity=0.255 Sum_probs=35.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCc--------HhhHHHHHHHcCC
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDK--------METAINIGYACSL 749 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~--------~~ta~~ia~~~gi 749 (928)
-++.+++.++++.|+++|++++++|+.. ...+..+.+.+|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3578999999999999999999999998 6667777777776
No 122
>PLN02940 riboflavin kinase
Probab=95.88 E-value=0.028 Score=63.38 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=33.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHH-HcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGY-ACSL 749 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~-~~gi 749 (928)
++.+++.+.++.|++.|+++.|+|+.....+..... ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 467999999999999999999999998877766554 4565
No 123
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.84 E-value=0.052 Score=54.41 Aligned_cols=50 Identities=14% Similarity=0.153 Sum_probs=35.4
Q ss_pred CEEEEEcCChhcHHHHHhCCeeE-Ee-cCCcch-hhhhcC--cEeecccccchhh
Q 002392 860 KTTLAIGDGANDVGMLQEADIGV-GI-SGVEGM-QAVMSS--DYAIAQFRFLERL 909 (928)
Q Consensus 860 ~~vlaiGDG~ND~~ml~~A~vGI-am-~g~e~~-~ak~aA--D~vi~~f~~l~~l 909 (928)
..+++|||+.+|+.+-+.||+.+ ++ .|.... .....+ |+++.++..+..+
T Consensus 121 ~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~ 175 (181)
T PRK08942 121 AGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQA 175 (181)
T ss_pred hhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHH
Confidence 56999999999999999999854 44 222111 122335 8999888777766
No 124
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.58 E-value=0.06 Score=56.01 Aligned_cols=41 Identities=15% Similarity=0.069 Sum_probs=35.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.+.++.|+++|+++.++|+-+...+.......|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 57899999999999999999999998888777777777764
No 125
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.52 E-value=0.05 Score=55.41 Aligned_cols=41 Identities=15% Similarity=0.178 Sum_probs=36.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.++|+.|+++|++++++|+-+...+..+.+.+|+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~ 132 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD 132 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 57899999999999999999999998888888888888873
No 126
>PRK09449 dUMP phosphatase; Provisional
Probab=95.46 E-value=0.067 Score=55.62 Aligned_cols=40 Identities=18% Similarity=0.073 Sum_probs=33.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.++++.|+ +|+++.++|......+...-+..|+.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR 134 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH
Confidence 46899999999999 68999999998877777777777763
No 127
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=95.23 E-value=0.19 Score=53.47 Aligned_cols=48 Identities=21% Similarity=0.248 Sum_probs=37.6
Q ss_pred EEeeeccc----CCCChHHHHHHHHHcCCeEEEEcCCcHhh---HHHHHHHcCCc
Q 002392 703 GATAVEDK----LQKGVPECIDKLAQAGIKVWVLTGDKMET---AINIGYACSLL 750 (928)
Q Consensus 703 G~~~ieD~----lr~~~~~aI~~l~~aGIkv~ilTGD~~~t---a~~ia~~~gi~ 750 (928)
|++.-.+. +-|++.++|++|+++|++++++||++..+ ......++|+-
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555555 88899999999999999999999988776 44445566763
No 128
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.21 E-value=0.035 Score=54.80 Aligned_cols=44 Identities=18% Similarity=0.188 Sum_probs=40.0
Q ss_pred ecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 707 ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
-..++.+++.+.++.|++.|++++++|+.....+....+.+|+.
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 34578999999999999999999999999999999999999985
No 129
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.17 E-value=0.044 Score=55.00 Aligned_cols=38 Identities=21% Similarity=0.277 Sum_probs=30.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
++.|++.++|+.|+++|+++.++|+... +..+.+.+|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l 124 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGL 124 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCc
Confidence 6789999999999999999999997542 3455666666
No 130
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.17 E-value=0.077 Score=55.09 Aligned_cols=40 Identities=23% Similarity=0.318 Sum_probs=35.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.++|+.|++. ++++++|+-....+..+.+.+|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 5789999999999999 999999999888888888888874
No 131
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.07 E-value=0.048 Score=54.75 Aligned_cols=40 Identities=20% Similarity=0.244 Sum_probs=33.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
-++.|++.++|+.|+++|+++.++|+. ..+..+.+.+|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 368999999999999999999999987 5566667777763
No 132
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.03 E-value=0.14 Score=50.70 Aligned_cols=53 Identities=21% Similarity=0.184 Sum_probs=43.9
Q ss_pred CceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCC-cHhhHHHHHHHcCCc
Q 002392 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGD-KMETAINIGYACSLL 750 (928)
Q Consensus 698 ~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD-~~~ta~~ia~~~gi~ 750 (928)
+.......+-+-++.+++.++++.|+++|+++.++|+- ....+..+...+|+.
T Consensus 33 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 33 NSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred CCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 34455566666778999999999999999999999976 888888888888874
No 133
>PLN02811 hydrolase
Probab=94.97 E-value=0.081 Score=54.91 Aligned_cols=48 Identities=13% Similarity=0.126 Sum_probs=34.0
Q ss_pred CEEEEEcCChhcHHHHHhCCeeE-Eec-CCcchhhhhcCcEeecccccch
Q 002392 860 KTTLAIGDGANDVGMLQEADIGV-GIS-GVEGMQAVMSSDYAIAQFRFLE 907 (928)
Q Consensus 860 ~~vlaiGDG~ND~~ml~~A~vGI-am~-g~e~~~ak~aAD~vi~~f~~l~ 907 (928)
..+++|||+..|+.+-+.||+-. ++. +.........+|+++.++..+.
T Consensus 158 ~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~ 207 (220)
T PLN02811 158 GKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFK 207 (220)
T ss_pred cceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCC
Confidence 56999999999999999999965 552 2222112346888888776543
No 134
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=94.96 E-value=0.093 Score=52.41 Aligned_cols=40 Identities=23% Similarity=0.207 Sum_probs=33.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.++++.|++.|++++++|+-.... ..+...+|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 578999999999999999999999988776 5554457763
No 135
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.56 E-value=0.2 Score=53.06 Aligned_cols=43 Identities=9% Similarity=0.169 Sum_probs=32.9
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhH---HHHHHHcCCc
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETA---INIGYACSLL 750 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta---~~ia~~~gi~ 750 (928)
..++-|++.+.++.|++.|+++.++|++..... ....+..|+.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~ 161 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP 161 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC
Confidence 345779999999999999999999999985443 3444556663
No 136
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=94.50 E-value=0.2 Score=49.84 Aligned_cols=48 Identities=17% Similarity=0.182 Sum_probs=33.7
Q ss_pred CEEEEEcCChhcHHHHHhCCeeE--Ee-cCCcc-hhhhhcCcEeecccccch
Q 002392 860 KTTLAIGDGANDVGMLQEADIGV--GI-SGVEG-MQAVMSSDYAIAQFRFLE 907 (928)
Q Consensus 860 ~~vlaiGDG~ND~~ml~~A~vGI--am-~g~e~-~~ak~aAD~vi~~f~~l~ 907 (928)
..++||||...|+.+=+.||+.. ++ .|... ......+|+++.++..|.
T Consensus 124 ~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 124 AQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred hhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 56899999999999999999953 44 34321 112235899998776553
No 137
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.44 E-value=0.68 Score=46.20 Aligned_cols=37 Identities=11% Similarity=0.160 Sum_probs=33.4
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 714 GVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 714 ~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.+...+.+|+++|+.|+.+|.-........-+++|+-
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999999998889999999865
No 138
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=94.28 E-value=0.15 Score=49.51 Aligned_cols=40 Identities=18% Similarity=0.348 Sum_probs=33.5
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHc
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~ 747 (928)
+....+++.+.++.|++.|+++.++|+.....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 3445689999999999999999999999988877766554
No 139
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=94.22 E-value=0.23 Score=52.03 Aligned_cols=67 Identities=18% Similarity=0.261 Sum_probs=33.4
Q ss_pred CceEEEeeCcccHHHHHHHH-hcCC------CEEEEEcCChhcHHHHHhC------CeeEEecCCcchhhhhcCcEeecc
Q 002392 836 ASVICCRSSPKQKALVTRLV-KGTG------KTTLAIGDGANDVGMLQEA------DIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 836 ~~~i~~r~~p~qK~~iv~~l-~~~g------~~vlaiGDG~ND~~ml~~A------~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
+.++-.|..-..|+.+++.+ +..+ ..++++||...|-.|++.. +++|-++..+.....-+|+|-+.+
T Consensus 154 ~~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 154 KKVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp SSEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred CCEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 44555666555799999988 5554 3799999999999999985 445555443322234566665543
No 140
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.17 E-value=0.24 Score=51.05 Aligned_cols=30 Identities=23% Similarity=0.292 Sum_probs=27.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhh
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~t 739 (928)
+.-+++.++++.|++.|++|+++|||....
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 567899999999999999999999999755
No 141
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=93.95 E-value=0.24 Score=49.03 Aligned_cols=40 Identities=18% Similarity=0.297 Sum_probs=33.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCc-HhhHHHHHHHcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDK-METAINIGYACSL 749 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~-~~ta~~ia~~~gi 749 (928)
.+-+++.++++.|++.|++++++|+.+ ...+..+.+.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 578999999999999999999999987 5556666666665
No 142
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=93.87 E-value=0.26 Score=47.50 Aligned_cols=27 Identities=30% Similarity=0.393 Sum_probs=24.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDK 736 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~ 736 (928)
++.+++.++++.|++.|+++.|+|...
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 468999999999999999999999865
No 143
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=93.63 E-value=0.098 Score=50.49 Aligned_cols=43 Identities=19% Similarity=0.023 Sum_probs=37.3
Q ss_pred ecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 707 ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
..-+++|++.+.++.|+ .++++.|+|.-....+..+.+.+++.
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~ 84 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPK 84 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcC
Confidence 34468999999999999 57999999999999999988888763
No 144
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=93.54 E-value=0.22 Score=50.85 Aligned_cols=39 Identities=13% Similarity=0.110 Sum_probs=31.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
++-|++.++++.|+++|+++.|+|+-... +....+.+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 57899999999999999999999986543 4555666666
No 145
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=93.50 E-value=0.27 Score=47.54 Aligned_cols=39 Identities=15% Similarity=0.222 Sum_probs=32.9
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEe
Q 002392 846 KQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI 884 (928)
Q Consensus 846 ~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam 884 (928)
.+|..+++.+.+....+.++|||.-|+++-+.+|+=.|-
T Consensus 146 ~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 146 HDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred CCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 379999999977778899999999999988877776553
No 146
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=93.00 E-value=0.32 Score=45.57 Aligned_cols=39 Identities=10% Similarity=0.072 Sum_probs=33.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC-cHhhHHHHHHHcC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGD-KMETAINIGYACS 748 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD-~~~ta~~ia~~~g 748 (928)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 6766666655554
No 147
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=92.43 E-value=0.37 Score=47.16 Aligned_cols=26 Identities=35% Similarity=0.517 Sum_probs=23.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGD 735 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD 735 (928)
++-+++.++|+.|+++|+++.++|--
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 36699999999999999999999974
No 148
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=91.91 E-value=0.22 Score=51.62 Aligned_cols=39 Identities=8% Similarity=0.092 Sum_probs=31.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
-++.+++.++|+.| ++++.++|+.....+...-+..|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 34668999999998 4999999998887777777777764
No 149
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=91.45 E-value=0.96 Score=57.96 Aligned_cols=41 Identities=22% Similarity=0.041 Sum_probs=36.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.+.+|+.+.++.|+++|++++|+|+-....+..+.+..|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 36799999999999999999999999988888888888874
No 150
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=91.42 E-value=0.75 Score=50.93 Aligned_cols=27 Identities=30% Similarity=0.388 Sum_probs=24.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCC
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGD 735 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD 735 (928)
-++.|++.++|+.|+++|+++.|+|.-
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 357899999999999999999999983
No 151
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=90.83 E-value=0.68 Score=51.01 Aligned_cols=37 Identities=19% Similarity=0.204 Sum_probs=33.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA 746 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~ 746 (928)
++-+++.++|+.|++.|+++.++|.-+...+..+.+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 3568999999999999999999999999989888776
No 152
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=90.58 E-value=1.1 Score=44.17 Aligned_cols=27 Identities=22% Similarity=0.413 Sum_probs=23.5
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcH
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKM 737 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~ 737 (928)
+-+++.++|+.|+++|+++.++|..+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 349999999999999999999996543
No 153
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=90.37 E-value=0.49 Score=48.60 Aligned_cols=29 Identities=24% Similarity=0.288 Sum_probs=25.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHh
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKME 738 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ 738 (928)
++.|++.++++.|+++|++++++|.....
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 57899999999999999999999986543
No 154
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=89.90 E-value=1.8 Score=44.77 Aligned_cols=41 Identities=15% Similarity=0.208 Sum_probs=33.2
Q ss_pred ecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHc
Q 002392 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (928)
Q Consensus 707 ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~ 747 (928)
++-++.+++.++|+.|+++|+++.|+|..+......+.+..
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~ 132 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHS 132 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhc
Confidence 34578999999999999999999999998776655554443
No 155
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.81 E-value=1 Score=51.78 Aligned_cols=58 Identities=12% Similarity=0.072 Sum_probs=53.2
Q ss_pred HhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcc
Q 002392 694 KIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (928)
Q Consensus 694 ~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~ 751 (928)
+.-.+..|.|++...-+.+.+....|+.|-++.|+.+..|-++.....-+|.++||-.
T Consensus 810 Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEa 867 (1354)
T KOG4383|consen 810 QAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEA 867 (1354)
T ss_pred HHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhcccc
Confidence 3446788999999999999999999999999999999999999999999999999854
No 156
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=88.69 E-value=7.9 Score=41.02 Aligned_cols=197 Identities=12% Similarity=0.051 Sum_probs=101.5
Q ss_pred eecccCCCChHHHHHHHHHc-CCeEEEEcCCcHhhHHHHHHHcC--CcccCceEE-EEcCCCchhhHhhhhcchhHHHHH
Q 002392 706 AVEDKLQKGVPECIDKLAQA-GIKVWVLTGDKMETAINIGYACS--LLRQEMKQI-VITLDSPDMEALEKQGDKENITKV 781 (928)
Q Consensus 706 ~ieD~lr~~~~~aI~~l~~a-GIkv~ilTGD~~~ta~~ia~~~g--i~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~ 781 (928)
-....+-++..+++++|... ..-+||+|||+.........-.| ++..++.-+ .++|...... .....+ .
T Consensus 36 p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~-----~~~~~~--~ 108 (266)
T COG1877 36 PEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINL-----AEEADL--R 108 (266)
T ss_pred ccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEec-----CHHHHh--h
Confidence 34455778899999999877 56799999999999888776333 333333222 3344321110 000111 1
Q ss_pred HHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHH--HHHHHH-----H-HhhccCCceEEEeeCcccHHHHHH
Q 002392 782 SLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK--KLEKMF-----L-DLAIDCASVICCRSSPKQKALVTR 853 (928)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~--~~~~~~-----~-~~~~~~~~~i~~r~~p~qK~~iv~ 853 (928)
....+...+.......++..-....+++.+.-.....-... ...... . --....+.+|-+|.+-..|+.+++
T Consensus 109 ~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~ 188 (266)
T COG1877 109 WLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIK 188 (266)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHH
Confidence 11222333332233333222223333333332211111000 000000 0 011234556788887778999999
Q ss_pred HH-hcCC---CEEEEEcCChhcHHHHHhCCe--e--EEecCCcchhhhhcCcEeecccccchhhh
Q 002392 854 LV-KGTG---KTTLAIGDGANDVGMLQEADI--G--VGISGVEGMQAVMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 854 ~l-~~~g---~~vlaiGDG~ND~~ml~~A~v--G--Iam~g~e~~~ak~aAD~vi~~f~~l~~ll 910 (928)
.+ +..+ ..+++.||...|-.|+++.+- | |-++-. ..+|+..++.+-.....+.+++
T Consensus 189 ~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~-~t~a~~~~~~~~~~~~~l~~~~ 252 (266)
T COG1877 189 YIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVG-STQAKFRLAGVYGFLRSLYKLL 252 (266)
T ss_pred HHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCC-cccccccccccHHHHHHHHHHH
Confidence 87 5443 359999999999999999983 3 322111 1225544444444444555553
No 157
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=88.68 E-value=1.1 Score=46.55 Aligned_cols=42 Identities=17% Similarity=0.157 Sum_probs=36.8
Q ss_pred cCCCChHHHHHHH--HHcCCeEEEEcCCcHhhHHHHHHHcCCcc
Q 002392 710 KLQKGVPECIDKL--AQAGIKVWVLTGDKMETAINIGYACSLLR 751 (928)
Q Consensus 710 ~lr~~~~~aI~~l--~~aGIkv~ilTGD~~~ta~~ia~~~gi~~ 751 (928)
|+.++.+++++.+ ...|+.+.|+|--+..-...+-+.-|+..
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~ 114 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD 114 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc
Confidence 5779999999999 56899999999999988888988888853
No 158
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=88.23 E-value=1.3 Score=46.18 Aligned_cols=30 Identities=23% Similarity=0.316 Sum_probs=26.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHh
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKME 738 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ 738 (928)
++.-|++.+.++.+++.|++|+++|||+..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 355688999999999999999999999865
No 159
>PHA02597 30.2 hypothetical protein; Provisional
Probab=87.42 E-value=3 Score=42.17 Aligned_cols=37 Identities=19% Similarity=0.210 Sum_probs=26.8
Q ss_pred HHHHHHHH-hcCC-CEEEEEcCChhcHHHHHhC--CeeE-Ee
Q 002392 848 KALVTRLV-KGTG-KTTLAIGDGANDVGMLQEA--DIGV-GI 884 (928)
Q Consensus 848 K~~iv~~l-~~~g-~~vlaiGDG~ND~~ml~~A--~vGI-am 884 (928)
|..++... ++.| ..+++|||..+|+.+-++| |+-. ++
T Consensus 132 kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 132 KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEe
Confidence 34444443 4444 4588999999999999999 9965 44
No 160
>PLN02645 phosphoglycolate phosphatase
Probab=87.37 E-value=2.1 Score=47.03 Aligned_cols=47 Identities=32% Similarity=0.451 Sum_probs=39.6
Q ss_pred EEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHH---HHcCC
Q 002392 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIG---YACSL 749 (928)
Q Consensus 703 G~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia---~~~gi 749 (928)
|++--.+.+-+++.++|+.|++.|++++++|++...+...++ +.+|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 666666778899999999999999999999999987777766 44565
No 161
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=86.95 E-value=2.1 Score=45.04 Aligned_cols=48 Identities=10% Similarity=0.131 Sum_probs=37.8
Q ss_pred EEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHH--HHHHHcCCc
Q 002392 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAI--NIGYACSLL 750 (928)
Q Consensus 703 G~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~--~ia~~~gi~ 750 (928)
|.+.-...+-|++.++|+.|+++|+++.++|.-....+. ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 566667788999999999999999999999996544333 455777774
No 162
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=86.58 E-value=2.8 Score=40.45 Aligned_cols=35 Identities=29% Similarity=0.336 Sum_probs=31.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINI 743 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~i 743 (928)
|..++++.+..+.+++.|.+++-+|+|+...+...
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~T 60 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRT 60 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHH
Confidence 79999999999999999999999999997766443
No 163
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=86.29 E-value=2.5 Score=40.63 Aligned_cols=40 Identities=20% Similarity=0.238 Sum_probs=35.9
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.-|++++=+..++++||++.++|--+..-+..++..+|+.
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc
Confidence 5678888899999999999999999999899999999883
No 164
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=84.88 E-value=1.5 Score=50.59 Aligned_cols=76 Identities=17% Similarity=0.163 Sum_probs=57.5
Q ss_pred CchhhHHHHHHHHHHHhHHHHHHHHHhhhhHH---------Hh----cce---------------------eEEEccCCe
Q 002392 103 APSVLAPLIVVIGATMAKEGVEDWRRRKQDIE---------AN----NRK---------------------VKVYGQDHT 148 (928)
Q Consensus 103 ~~~~~~~l~~vl~i~~~~~~~~~~~r~~~~~~---------~n----~~~---------------------~~v~r~~g~ 148 (928)
.+..+..++.+++++++.+.++|+.++++.++ +. .++ -+.+| ||+
T Consensus 87 gl~nAsal~LLLLlnilL~grQdRikrr~~eqklRg~~DaI~da~kdgreiq~~nam~~dL~~pfa~s~s~h~afR-DGh 165 (1354)
T KOG4383|consen 87 GLSNASALALLLLLNILLEGRQDRIKRRAFEQKLRGAFDAILDAEKDGREIQKFNAMPKDLEAPFADSASCHSAFR-DGH 165 (1354)
T ss_pred eechHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCccccCccCcHHHHHHHhc-cCe
Confidence 35566777888888999999998887766211 10 001 11245 999
Q ss_pred EEEEeccccccCcEEEecCCcccCceEEEEe
Q 002392 149 FVETKWKNLRVGDLVKVHKDEYFPADLLLLS 179 (928)
Q Consensus 149 ~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ 179 (928)
.+++|..-||.||||-+++|+..||.+.=..
T Consensus 166 lm~lP~~LLVeGDiIa~RPGQeafan~~g~~ 196 (1354)
T KOG4383|consen 166 LMELPRILLVEGDIIAFRPGQEAFANCEGFD 196 (1354)
T ss_pred eeecceeEEEeccEEEecCCccccccccccC
Confidence 9999999999999999999999999886555
No 165
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=84.71 E-value=0.92 Score=40.48 Aligned_cols=48 Identities=19% Similarity=0.198 Sum_probs=36.1
Q ss_pred EEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHH---HHcCCc
Q 002392 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIG---YACSLL 750 (928)
Q Consensus 703 G~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia---~~~gi~ 750 (928)
|++...+++=|++.++|+.|+++|++++++|-....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 566667889999999999999999999999988766644444 556663
No 166
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=83.98 E-value=6.3 Score=39.70 Aligned_cols=40 Identities=15% Similarity=0.153 Sum_probs=34.2
Q ss_pred cCCCChHHHHHHHHHcCC-eEEEEcCCcHhhHHHHHHHcCC
Q 002392 710 KLQKGVPECIDKLAQAGI-KVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGI-kv~ilTGD~~~ta~~ia~~~gi 749 (928)
|+-|+..++|+.++..|. .++|+|--+......+-+..|+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence 567999999999999997 9999999888777777777776
No 167
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=83.92 E-value=2.2 Score=43.26 Aligned_cols=31 Identities=26% Similarity=0.305 Sum_probs=26.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETA 740 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta 740 (928)
++.+++.++++.|+++|+++.++|.-+....
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~ 114 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHT 114 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhH
Confidence 4789999999999999999999999765543
No 168
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=83.42 E-value=6.7 Score=38.84 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCC---CEEEEEcCChhcHHHHHhCCee
Q 002392 848 KALVTRLVKGTG---KTTLAIGDGANDVGMLQEADIG 881 (928)
Q Consensus 848 K~~iv~~l~~~g---~~vlaiGDG~ND~~ml~~A~vG 881 (928)
...+.+.+++.+ ....+|||-..|+.+-..|+++
T Consensus 108 ~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 108 PGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred hHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 455666666555 5689999999999999999886
No 169
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=82.59 E-value=7.3 Score=45.43 Aligned_cols=66 Identities=15% Similarity=0.220 Sum_probs=43.5
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccccchhhhhhhchhhhh
Q 002392 846 KQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYR 919 (928)
Q Consensus 846 ~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~l~~lll~~Gr~~~~ 919 (928)
++|..-++..........+.||+.+|.+||+.|+-+..+..+... .+...+..+.+++.-||..++
T Consensus 175 e~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~~--------~~~~~~~~~~~~fhdgrl~~~ 240 (497)
T PLN02177 175 DHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPRTKCE--------PLPRNKLLSPVIFHEGRLVQR 240 (497)
T ss_pred HHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCCCCCC--------cCCcccCCCceeeeCCcccCC
Confidence 356666654321112237999999999999999999998543211 144456677776777876554
No 170
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=82.08 E-value=2.7 Score=44.46 Aligned_cols=50 Identities=10% Similarity=0.082 Sum_probs=41.1
Q ss_pred EEeeecccCCCChHHHHHHHHHcCCeEEEEcC---CcHhhHHHHHHHcCCccc
Q 002392 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTG---DKMETAINIGYACSLLRQ 752 (928)
Q Consensus 703 G~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTG---D~~~ta~~ia~~~gi~~~ 752 (928)
|++.-.+.+-+++.++|++|+++|++++++|| +.........+.+|+-..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 44555667778999999999999999999996 888888888888887543
No 171
>PRK10444 UMP phosphatase; Provisional
Probab=81.68 E-value=1.7 Score=45.82 Aligned_cols=45 Identities=16% Similarity=0.282 Sum_probs=40.2
Q ss_pred EEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHc
Q 002392 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (928)
Q Consensus 703 G~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~ 747 (928)
|++.-.+.+-|++.++|+.|+++|++++++||+...+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 666667788999999999999999999999999998888877775
No 172
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=80.86 E-value=3.3 Score=44.12 Aligned_cols=41 Identities=10% Similarity=0.148 Sum_probs=37.9
Q ss_pred CC-CChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcc
Q 002392 711 LQ-KGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (928)
Q Consensus 711 lr-~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~ 751 (928)
+| |++.+++++|+++|+++.++|+.....+....+.+||..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999999999999999999964
No 173
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=80.83 E-value=8 Score=40.81 Aligned_cols=30 Identities=20% Similarity=0.257 Sum_probs=26.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHh
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKME 738 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ 738 (928)
.|.-|++.+..+.+++.|++|+++|||...
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 355679999999999999999999999854
No 174
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=79.85 E-value=4.1 Score=33.93 Aligned_cols=47 Identities=19% Similarity=0.360 Sum_probs=33.7
Q ss_pred CCEEEEEcCC-hhcHHHHHhCCee-EEe-cCCcc-hhh---hhcCcEeeccccc
Q 002392 859 GKTTLAIGDG-ANDVGMLQEADIG-VGI-SGVEG-MQA---VMSSDYAIAQFRF 905 (928)
Q Consensus 859 g~~vlaiGDG-~ND~~ml~~A~vG-Iam-~g~e~-~~a---k~aAD~vi~~f~~ 905 (928)
...++||||. ..|+.+=+.+|+- |.+ +|... .+. ...+|||+.++..
T Consensus 21 ~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e 74 (75)
T PF13242_consen 21 PSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKE 74 (75)
T ss_dssp GGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred HHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence 3569999999 9999999999984 455 34322 112 2579999887653
No 175
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=79.78 E-value=4.8 Score=40.19 Aligned_cols=38 Identities=11% Similarity=0.001 Sum_probs=31.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.++|+.|+ .+++++|.-+...+..+.+..|+.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~ 121 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIE 121 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcH
Confidence 36789999999997 478999998888888888888874
No 176
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=79.15 E-value=4.6 Score=40.40 Aligned_cols=35 Identities=17% Similarity=0.014 Sum_probs=30.1
Q ss_pred hHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 715 VPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 715 ~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
..++++.|++. +++.++||.....+..+.+..|+.
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~ 126 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLR 126 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcH
Confidence 46899999865 899999999999999888888874
No 177
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=78.80 E-value=1.8 Score=40.28 Aligned_cols=33 Identities=15% Similarity=0.091 Sum_probs=29.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAI 741 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~ 741 (928)
+++.+++.+++++++++|+.++++|||+.....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 567889999999999999999999999987654
No 178
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=77.69 E-value=7.4 Score=40.25 Aligned_cols=43 Identities=26% Similarity=0.223 Sum_probs=39.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~ 751 (928)
.++.+|+.+.+..|++.|+.+.++|+-....+..+....|+..
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~ 127 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD 127 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh
Confidence 4688999999999999999999999999999999999999864
No 179
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=76.29 E-value=1.1e+02 Score=38.39 Aligned_cols=37 Identities=16% Similarity=0.056 Sum_probs=29.6
Q ss_pred CCCChHHHHHHHHHc-CCeEEEEcCCcHhhHHHHHHHc
Q 002392 711 LQKGVPECIDKLAQA-GIKVWVLTGDKMETAINIGYAC 747 (928)
Q Consensus 711 lr~~~~~aI~~l~~a-GIkv~ilTGD~~~ta~~ia~~~ 747 (928)
+-+++.++++.|.+. +..|+|+|||...+.......+
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~ 570 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY 570 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC
Confidence 456788888888765 7899999999999988776543
No 180
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=74.77 E-value=11 Score=36.91 Aligned_cols=42 Identities=21% Similarity=0.247 Sum_probs=35.6
Q ss_pred cccCCCChHHHHHHHHHcCCe--EEEEcCC-------cHhhHHHHHHHcCC
Q 002392 708 EDKLQKGVPECIDKLAQAGIK--VWVLTGD-------KMETAINIGYACSL 749 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIk--v~ilTGD-------~~~ta~~ia~~~gi 749 (928)
++++-++..+.+++|++.+.. |+|+|-- ....|..+++.+|+
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI 107 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI 107 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC
Confidence 567889999999999999874 9999875 36778889998887
No 181
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=74.71 E-value=6.4 Score=50.20 Aligned_cols=22 Identities=14% Similarity=-0.037 Sum_probs=19.7
Q ss_pred CCeEEEEeccccccCcEEEecC
Q 002392 146 DHTFVETKWKNLRVGDLVKVHK 167 (928)
Q Consensus 146 ~g~~~~i~~~~L~vGDII~l~~ 167 (928)
-|..+.+...|.+|.|.+.++.
T Consensus 186 ~GDiV~l~~Gd~IPaD~~li~g 207 (941)
T TIGR01517 186 VGDIVSLSTGDVVPADGVFISG 207 (941)
T ss_pred CCCEEEECCCCEecccEEEEEc
Confidence 5889999999999999999964
No 182
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=74.55 E-value=6.6 Score=41.94 Aligned_cols=41 Identities=15% Similarity=0.124 Sum_probs=36.6
Q ss_pred CC-CChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcc
Q 002392 711 LQ-KGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (928)
Q Consensus 711 lr-~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~ 751 (928)
+| |++.++|++|+++|+++.++|+.....+..+....|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 35 899999999999999999999877888889999999953
No 183
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=74.21 E-value=78 Score=41.10 Aligned_cols=82 Identities=16% Similarity=0.184 Sum_probs=57.2
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHhhhhHHHhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCc
Q 002392 106 VLAPLIVVIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDG 185 (928)
Q Consensus 106 ~~~~l~~vl~i~~~~~~~~~~~r~~~~~~~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G 185 (928)
++.--++++++..+......++++++.+++..... ......| ++-|....+...|.+|-|.++|..+. +.
T Consensus 192 ~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~-----~~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~~~~-g~ 261 (1054)
T TIGR01657 192 YYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVH-----KPQSVIV----IRNGKWVTIASDELVPGDIVSIPRPE-EK 261 (1054)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CCeeEEE----EECCEEEEEEcccCCCCCEEEEecCC-CC
Confidence 45566778888888899999999999887776432 1122222 45688999999999999999998211 12
Q ss_pred eEEEEeccCCCC
Q 002392 186 ICYVETMNLDGE 197 (928)
Q Consensus 186 ~~~Vd~s~LtGE 197 (928)
.+=+|--.|+|+
T Consensus 262 ~iPaD~~ll~g~ 273 (1054)
T TIGR01657 262 TMPCDSVLLSGS 273 (1054)
T ss_pred EecceEEEEeCc
Confidence 355565566663
No 184
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=73.27 E-value=21 Score=42.11 Aligned_cols=183 Identities=10% Similarity=0.055 Sum_probs=116.3
Q ss_pred ceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHh-cccCCCCCCchhhHHHHHHHHHHHhHHHHHHHHHhhhhHHHh
Q 002392 58 NYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVS-FSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRKQDIEAN 136 (928)
Q Consensus 58 N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~-~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~r~~~~~~~n 136 (928)
+..+-..|+++.+++..-|.+|.+..++++.+..++. +-.-....++..+++++++.++--..+-++.++|.+..+...
T Consensus 85 ~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r~~rd~~~Nse~ 164 (1051)
T KOG0210|consen 85 RNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKRRRRDRELNSEK 164 (1051)
T ss_pred hhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence 3344568999999999999999999999988876643 211222356677777888888888889999999999877665
Q ss_pred cceeEEE-----c----cCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceE----E---EEeccCCCCccc
Q 002392 137 NRKVKVY-----G----QDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGIC----Y---VETMNLDGETNL 200 (928)
Q Consensus 137 ~~~~~v~-----r----~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~----~---Vd~s~LtGEs~~ 200 (928)
-.+.+.- . +-|..+.+.-.+=+|-|.|.++.-|.--. ..+.+..-+|.. . =-+..++-++.+
T Consensus 165 y~~ltr~~~~~~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~--~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el 242 (1051)
T KOG0210|consen 165 YTKLTRDGTRREPSSDIKVGDVIIVHKDERVPADMILLRTSDKSGS--CFIRTDQLDGETDWKLRLPVPRTQHLTEDSEL 242 (1051)
T ss_pred heeeccCCcccccccccccccEEEEecCCcCCcceEEEEccCCCCc--eEEeccccCCcccceeeccchhhccCCcccch
Confidence 3222111 1 14778888889999999999997664321 233343322321 0 113444444433
Q ss_pred eeeccchhhccCCChhhhccceEEEEeecCC------CCceeEEEEEEECCe
Q 002392 201 KLKRSLEATNHLRDEESFQKFTAVIKCEDPN------ERLYSFVGTLQYEGK 246 (928)
Q Consensus 201 ~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~------~~~~~f~Gt~~~~g~ 246 (928)
..-. .......+++..|-|++...+.+ -...++++|++-.|.
T Consensus 243 ~~i~----v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t 290 (1051)
T KOG0210|consen 243 MEIS----VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGT 290 (1051)
T ss_pred heEE----EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCc
Confidence 2221 01111235567788887765443 345678888888765
No 185
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=70.15 E-value=14 Score=38.77 Aligned_cols=50 Identities=22% Similarity=0.262 Sum_probs=32.3
Q ss_pred CEEEEEcCC-hhcHHHHHhCCeeE-EecCCcch--h---hhhcCcEeecccccchhh
Q 002392 860 KTTLAIGDG-ANDVGMLQEADIGV-GISGVEGM--Q---AVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 860 ~~vlaiGDG-~ND~~ml~~A~vGI-am~g~e~~--~---ak~aAD~vi~~f~~l~~l 909 (928)
..+++|||. ..|+.+=+.||+-. .+...... + .....|+.|.++..|..+
T Consensus 181 ~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~ 237 (238)
T PRK10748 181 GEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTSL 237 (238)
T ss_pred hHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHHHhh
Confidence 569999999 69999999999854 34322111 0 113466777776665544
No 186
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=68.12 E-value=41 Score=42.72 Aligned_cols=64 Identities=20% Similarity=0.385 Sum_probs=42.9
Q ss_pred HHHHHHHHhhccCCceEEE-----eeCc--ccHHHHHHHH-hcCC----CEEEEEcCChh-cHH-HHHhCCeeEEecC
Q 002392 823 KLEKMFLDLAIDCASVICC-----RSSP--KQKALVTRLV-KGTG----KTTLAIGDGAN-DVG-MLQEADIGVGISG 886 (928)
Q Consensus 823 ~~~~~~~~~~~~~~~~i~~-----r~~p--~qK~~iv~~l-~~~g----~~vlaiGDG~N-D~~-ml~~A~vGIam~g 886 (928)
++.+.+......|+.+.+. .+-| ..|...++.| .+.| +++.++||+.| |.+ ||.--+-+|-+.|
T Consensus 925 elr~~Lr~~gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g 1002 (1050)
T TIGR02468 925 ELRKLLRIQGLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKG 1002 (1050)
T ss_pred HHHHHHHhCCCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEec
Confidence 4555555555666643322 2334 3799999999 5555 45677999999 955 7777788887755
No 187
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=67.32 E-value=33 Score=35.26 Aligned_cols=40 Identities=18% Similarity=0.066 Sum_probs=33.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++-+++.++++.++.. .+++++|--....+.....++||.
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~ 138 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLL 138 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCCh
Confidence 5668888888888888 889999987777788888888864
No 188
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=63.38 E-value=1.9e+02 Score=36.60 Aligned_cols=38 Identities=16% Similarity=0.086 Sum_probs=29.9
Q ss_pred CCCChHHHHHHHHHc-CCeEEEEcCCcHhhHHHHHHHcC
Q 002392 711 LQKGVPECIDKLAQA-GIKVWVLTGDKMETAINIGYACS 748 (928)
Q Consensus 711 lr~~~~~aI~~l~~a-GIkv~ilTGD~~~ta~~ia~~~g 748 (928)
+-+++.++++.|.+. +..|+|+|||...+.......++
T Consensus 623 p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~ 661 (934)
T PLN03064 623 LHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD 661 (934)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 336678889988765 67899999999999887765543
No 189
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=60.69 E-value=34 Score=40.23 Aligned_cols=27 Identities=22% Similarity=0.439 Sum_probs=24.2
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcH
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKM 737 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~ 737 (928)
+-++++++|+.|+++|++++|+|.-..
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGG 224 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcc
Confidence 469999999999999999999998554
No 190
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=60.65 E-value=17 Score=39.20 Aligned_cols=50 Identities=20% Similarity=0.283 Sum_probs=37.1
Q ss_pred EEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHH---HHHHcCCccc
Q 002392 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAIN---IGYACSLLRQ 752 (928)
Q Consensus 703 G~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~---ia~~~gi~~~ 752 (928)
|++.-.+.+-+++.++|+.|+++|++++++||+...+... -.+.+|+...
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~ 63 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGL 63 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 4444467778899999999999999999999977544333 3455777543
No 191
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=58.86 E-value=19 Score=36.06 Aligned_cols=49 Identities=27% Similarity=0.308 Sum_probs=41.3
Q ss_pred ceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHc
Q 002392 699 LILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (928)
Q Consensus 699 l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~ 747 (928)
+.+-|.+-+||..-|++.+|++.|++++.+|..+|--..++-..+.+.+
T Consensus 12 lDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL 60 (262)
T KOG3040|consen 12 LDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERL 60 (262)
T ss_pred EeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHH
Confidence 4577999999999999999999999999999999887776655554443
No 192
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=58.75 E-value=1.3e+02 Score=37.60 Aligned_cols=22 Identities=14% Similarity=0.018 Sum_probs=19.2
Q ss_pred CCeEEEEeccccccCcEEEecC
Q 002392 146 DHTFVETKWKNLRVGDLVKVHK 167 (928)
Q Consensus 146 ~g~~~~i~~~~L~vGDII~l~~ 167 (928)
-|..+.+...|.+|-|.+.++.
T Consensus 112 ~GDiV~l~~Gd~IPaDg~vi~g 133 (755)
T TIGR01647 112 PGDVVRLKIGDIVPADCRLFEG 133 (755)
T ss_pred CCCEEEECCCCEEeceEEEEec
Confidence 5889999999999999998864
No 193
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=56.42 E-value=9.2 Score=37.40 Aligned_cols=43 Identities=14% Similarity=0.020 Sum_probs=37.6
Q ss_pred eecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 706 AVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 706 ~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
.+.=..||++.+.++.|.+. ..+++.|--....|..+...++.
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCc
Confidence 44446899999999999987 99999999999999999887775
No 194
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=55.82 E-value=62 Score=41.24 Aligned_cols=124 Identities=14% Similarity=0.078 Sum_probs=69.3
Q ss_pred CCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEE-EEe-c-cCCCCccceeeccchhhccCCChhhhccce
Q 002392 146 DHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICY-VET-M-NLDGETNLKLKRSLEATNHLRDEESFQKFT 222 (928)
Q Consensus 146 ~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~-Vd~-s-~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~ 222 (928)
-|..+.+...|.+|-|...|+..+ . .++.+.-+|... |+= + .+.+|..|..
T Consensus 160 pGDiV~l~~gd~vPAD~rLl~~~~-l-----~VdEs~LTGES~pv~K~~~~~~~~~~~~~-------------------- 213 (917)
T COG0474 160 PGDIVLLEAGDVVPADLRLLESSD-L-----EVDESALTGESLPVEKQALPLTKSDAPLG-------------------- 213 (917)
T ss_pred CCcEEEECCCCccccceEEEEecC-c-----eEEcccccCCCcchhcccccccccccccc--------------------
Confidence 588999999999999999999876 3 223222112211 111 0 1111222221
Q ss_pred EEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccceeecCC-CCCCcccHHHHHHHH
Q 002392 223 AVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNAT-DPPSKRSKIERKMDK 301 (928)
Q Consensus 223 ~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~~~~~-~~~~k~s~~~~~~~~ 301 (928)
.+.....|+||.+..|+.. |-. . ..|.-++-|+-++.+.... ....-.-.+.+....
T Consensus 214 -------~d~~n~l~sGt~V~~G~~~----------giV-v----aTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~ 271 (917)
T COG0474 214 -------LDRDNMLFSGTTVVSGRAK----------GIV-V----ATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKF 271 (917)
T ss_pred -------CCccceEEeCCEEEcceEE----------EEE-E----EEcCccHHHHHHHhhccccccCCcHHHHHHHHHHH
Confidence 1122267999999998722 111 1 5677788898888877773 333333445555555
Q ss_pred HHHHHHHHHHHHHHHH
Q 002392 302 IVYLLFSTLILISSTG 317 (928)
Q Consensus 302 ~~~~~~~~~~~~~~i~ 317 (928)
+..+.+.+.++..++.
T Consensus 272 l~~~~l~~~~~~~~~~ 287 (917)
T COG0474 272 LLVLALVLGALVFVVG 287 (917)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5554444444444343
No 195
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=53.47 E-value=18 Score=28.07 Aligned_cols=38 Identities=18% Similarity=0.360 Sum_probs=31.5
Q ss_pred hcceeEEEccCCeEEEEecc-ccccCcEEEecCCcccCc
Q 002392 136 NNRKVKVYGQDHTFVETKWK-NLRVGDLVKVHKDEYFPA 173 (928)
Q Consensus 136 n~~~~~v~r~~g~~~~i~~~-~L~vGDII~l~~ge~vPa 173 (928)
....+.|+..+|+|.+|+.. +..+||-|.+.+.+..+.
T Consensus 4 ~~~~aiVlT~dGeF~~ik~~~~~~vG~eI~~~~~~~~~~ 42 (56)
T PF12791_consen 4 KKKYAIVLTPDGEFIKIKRKPGMEVGQEIEFDEKDIINK 42 (56)
T ss_pred cCCEEEEEcCCCcEEEEeCCCCCcccCEEEEechhhccc
Confidence 45678888889999998864 799999999999887664
No 196
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=53.35 E-value=37 Score=33.02 Aligned_cols=39 Identities=13% Similarity=0.186 Sum_probs=27.8
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhhH----HHHHHHcCC
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETA----INIGYACSL 749 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta----~~ia~~~gi 749 (928)
+++-+++.|..-++.|=++..+|||..... ..+|+...|
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i 157 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHI 157 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhccc
Confidence 455677788888889999999999986543 344444444
No 197
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=52.80 E-value=42 Score=30.96 Aligned_cols=80 Identities=18% Similarity=0.211 Sum_probs=58.5
Q ss_pred HHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHH
Q 002392 645 RYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQ 724 (928)
Q Consensus 645 ~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~ 724 (928)
-+...|++|+.+... ++.+++.+ .-.+.+-.++++-+......+.+++.++.|++
T Consensus 22 ~l~~~G~~vi~lG~~-vp~e~~~~------------------------~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~ 76 (122)
T cd02071 22 ALRDAGFEVIYTGLR-QTPEEIVE------------------------AAIQEDVDVIGLSSLSGGHMTLFPEVIELLRE 76 (122)
T ss_pred HHHHCCCEEEECCCC-CCHHHHHH------------------------HHHHcCCCEEEEcccchhhHHHHHHHHHHHHh
Confidence 478899999998854 34333221 22345777888888888899999999999999
Q ss_pred cCC-e-EEEEcCCcHhhHHHHHHHcCC
Q 002392 725 AGI-K-VWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 725 aGI-k-v~ilTGD~~~ta~~ia~~~gi 749 (928)
+|. + .+++-|..+..-..-.++.|+
T Consensus 77 ~~~~~i~i~~GG~~~~~~~~~~~~~G~ 103 (122)
T cd02071 77 LGAGDILVVGGGIIPPEDYELLKEMGV 103 (122)
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHCCC
Confidence 976 3 466777766655666778886
No 198
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=48.96 E-value=22 Score=37.73 Aligned_cols=47 Identities=21% Similarity=0.235 Sum_probs=39.7
Q ss_pred EEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHc
Q 002392 701 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (928)
Q Consensus 701 llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~ 747 (928)
+=|++.--..+=|++.++|+.|+++|++++++|--+..+...++.++
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 34888888899999999999999999999999998877777554443
No 199
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=47.30 E-value=26 Score=34.39 Aligned_cols=33 Identities=9% Similarity=0.019 Sum_probs=25.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
++.|++.++++ +++++|.-+......+.+.+|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l 122 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGL 122 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCC
Confidence 47899999998 3678888777777777777776
No 200
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=46.50 E-value=71 Score=29.11 Aligned_cols=81 Identities=15% Similarity=0.210 Sum_probs=57.9
Q ss_pred HHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHH
Q 002392 644 NRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLA 723 (928)
Q Consensus 644 ~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~ 723 (928)
..+...|++|+.+. ..++.+++.+ .-.+.+-.++|+......--+.+++.++.++
T Consensus 21 ~~l~~~G~~V~~lg-~~~~~~~l~~------------------------~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~ 75 (119)
T cd02067 21 RALRDAGFEVIDLG-VDVPPEEIVE------------------------AAKEEDADAIGLSGLLTTHMTLMKEVIEELK 75 (119)
T ss_pred HHHHHCCCEEEECC-CCCCHHHHHH------------------------HHHHcCCCEEEEeccccccHHHHHHHHHHHH
Confidence 34667999998877 3355554332 1234677889998887777799999999999
Q ss_pred HcCC-e-EEEEcCCcHhhHHHHHHHcCC
Q 002392 724 QAGI-K-VWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 724 ~aGI-k-v~ilTGD~~~ta~~ia~~~gi 749 (928)
+.+- . .+++-|-.....-..+++.|.
T Consensus 76 ~~~~~~~~i~vGG~~~~~~~~~~~~~G~ 103 (119)
T cd02067 76 EAGLDDIPVLVGGAIVTRDFKFLKEIGV 103 (119)
T ss_pred HcCCCCCeEEEECCCCChhHHHHHHcCC
Confidence 9976 3 467777665543457788886
No 201
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=45.63 E-value=3.1e+02 Score=35.05 Aligned_cols=23 Identities=13% Similarity=0.019 Sum_probs=20.6
Q ss_pred CCeEEEEeccccccCcEEEecCC
Q 002392 146 DHTFVETKWKNLRVGDLVKVHKD 168 (928)
Q Consensus 146 ~g~~~~i~~~~L~vGDII~l~~g 168 (928)
-|..+.+...|.+|-|.+.++..
T Consensus 93 ~GDiv~l~~Gd~IPaD~~ll~~~ 115 (917)
T TIGR01116 93 PGDIVELAVGDKVPADIRVLSLK 115 (917)
T ss_pred CCCEEEECCCCEeeccEEEEEec
Confidence 58899999999999999999865
No 202
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=43.81 E-value=3.1e+02 Score=35.43 Aligned_cols=125 Identities=16% Similarity=0.049 Sum_probs=65.4
Q ss_pred CCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeeccchhhccCCChhhhccceEEE
Q 002392 146 DHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVI 225 (928)
Q Consensus 146 ~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i 225 (928)
-|..+.+...+.+|.|.+.++.+. +.++.|.-+|...--+.. .|.+. ..+.+.
T Consensus 161 ~GDiv~l~~Gd~IPaD~~il~~~~------l~VdeS~LTGES~pv~K~-~~~~~---~~~~~~----------------- 213 (997)
T TIGR01106 161 VGDLVEVKGGDRIPADLRIISAQG------CKVDNSSLTGESEPQTRS-PEFTH---ENPLET----------------- 213 (997)
T ss_pred CCCEEEECCCCEEeeeEEEEEccC------cEEEccccCCCCCceecc-CCCcc---cCcccc-----------------
Confidence 588999999999999999998652 223322222322211111 11110 011110
Q ss_pred EeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccceeecCCCC-CCcccHHHHHHHHHHH
Q 002392 226 KCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDP-PSKRSKIERKMDKIVY 304 (928)
Q Consensus 226 ~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~~~~~~~-~~k~s~~~~~~~~~~~ 304 (928)
....|+||.+++|... | .+. ..|.=.+.|.-.++....... ..-...+++..+.++.
T Consensus 214 -------~n~l~~Gt~v~~G~~~----------~-~V~----~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~ 271 (997)
T TIGR01106 214 -------RNIAFFSTNCVEGTAR----------G-IVV----NTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITG 271 (997)
T ss_pred -------CCeEEeccEeeeeeEE----------E-EEE----EccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHH
Confidence 1145999999988621 1 111 233344455545544444332 2234677888888877
Q ss_pred HHHHHHHHHHHHHHH
Q 002392 305 LLFSTLILISSTGSV 319 (928)
Q Consensus 305 ~~~~~~~~~~~i~~i 319 (928)
+.+++.+++.++..+
T Consensus 272 ~~~~~~~~~~~~~~~ 286 (997)
T TIGR01106 272 VAVFLGVSFFILSLI 286 (997)
T ss_pred HHHHHHHHHHHHHHH
Confidence 766655555544433
No 203
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=41.60 E-value=43 Score=34.93 Aligned_cols=47 Identities=21% Similarity=0.198 Sum_probs=36.4
Q ss_pred EEeeecccCCCChHHHHHHHHHcCCeEEEEc---CCcHhhHHHHHHH-cCC
Q 002392 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLT---GDKMETAINIGYA-CSL 749 (928)
Q Consensus 703 G~~~ieD~lr~~~~~aI~~l~~aGIkv~ilT---GD~~~ta~~ia~~-~gi 749 (928)
|++.-.+.+=+++.++|+.++++|++++++| |+..........+ .|+
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~ 57 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGV 57 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 5555556777899999999999999999998 7777665554444 665
No 204
>PTZ00445 p36-lilke protein; Provisional
Probab=41.06 E-value=43 Score=33.99 Aligned_cols=29 Identities=21% Similarity=0.146 Sum_probs=25.2
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhh
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~t 739 (928)
++|+.+.-+++|+++||+|.++|=-...+
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKEL 104 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhh
Confidence 68899999999999999999999765543
No 205
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=40.31 E-value=46 Score=32.73 Aligned_cols=41 Identities=24% Similarity=0.285 Sum_probs=31.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEc-CCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLT-GDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilT-GD~~~ta~~ia~~~gi~ 750 (928)
.+-++++++|+.|++.|+++.++| -+.+.-|..+.+.+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 367999999999999999999999 47789999999999996
No 206
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=37.48 E-value=8.3e+02 Score=31.84 Aligned_cols=22 Identities=14% Similarity=-0.015 Sum_probs=19.4
Q ss_pred CCeEEEEeccccccCcEEEecC
Q 002392 146 DHTFVETKWKNLRVGDLVKVHK 167 (928)
Q Consensus 146 ~g~~~~i~~~~L~vGDII~l~~ 167 (928)
-|..+.+...|.+|-|...++.
T Consensus 138 pGDIv~L~~Gd~VPAD~rLi~~ 159 (1053)
T TIGR01523 138 PGDICLLKTGDTIPADLRLIET 159 (1053)
T ss_pred CCCEEEECCCCEeeccEEEEEe
Confidence 4788999999999999999984
No 207
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=37.43 E-value=48 Score=29.18 Aligned_cols=36 Identities=19% Similarity=0.236 Sum_probs=26.0
Q ss_pred hHHHhcceeEEEccCCeEEEEeccccccCcEEEecCCccc
Q 002392 132 DIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYF 171 (928)
Q Consensus 132 ~~~~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~v 171 (928)
........|++ ||+.. .++.++++||+|.|.-|...
T Consensus 28 k~~~~~GrV~v---NG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 28 KEMIEGGRVKV---NGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred HHHHHCCeEEE---CCEEc-ccccccCCCCEEEEEeCCcE
Confidence 33344566655 55555 78999999999999987653
No 208
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=36.88 E-value=1.1e+02 Score=28.75 Aligned_cols=80 Identities=11% Similarity=0.114 Sum_probs=55.0
Q ss_pred HHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHH
Q 002392 645 RYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQ 724 (928)
Q Consensus 645 ~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~ 724 (928)
.+...|+.|+-+....-+++ +- ..-.|.+-.++|+-++-=.--+..+++++.|++
T Consensus 24 ~l~~~GfeVi~LG~~v~~e~-~v------------------------~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~ 78 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSPQEE-FI------------------------KAAIETKADAILVSSLYGHGEIDCKGLRQKCDE 78 (134)
T ss_pred HHHHCCCEEEECCCCCCHHH-HH------------------------HHHHHcCCCEEEEecccccCHHHHHHHHHHHHH
Confidence 45779999999885443332 11 123345778888888877767778999999999
Q ss_pred cCC--eEEEEcCCcH------hhHHHHHHHcCC
Q 002392 725 AGI--KVWVLTGDKM------ETAINIGYACSL 749 (928)
Q Consensus 725 aGI--kv~ilTGD~~------~ta~~ia~~~gi 749 (928)
+|+ .+||+-|-.. .....-++++|+
T Consensus 79 ~gl~~~~vivGG~~vi~~~d~~~~~~~l~~~Gv 111 (134)
T TIGR01501 79 AGLEGILLYVGGNLVVGKQDFPDVEKRFKEMGF 111 (134)
T ss_pred CCCCCCEEEecCCcCcChhhhHHHHHHHHHcCC
Confidence 987 5677888532 122445788886
No 209
>PRK10444 UMP phosphatase; Provisional
Probab=35.95 E-value=2.5e+02 Score=29.56 Aligned_cols=48 Identities=17% Similarity=0.284 Sum_probs=32.1
Q ss_pred CCEEEEEcCCh-hcHHHHHhCCeeE-Ee-cCCcchhhh----hcCcEeecccccc
Q 002392 859 GKTTLAIGDGA-NDVGMLQEADIGV-GI-SGVEGMQAV----MSSDYAIAQFRFL 906 (928)
Q Consensus 859 g~~vlaiGDG~-ND~~ml~~A~vGI-am-~g~e~~~ak----~aAD~vi~~f~~l 906 (928)
...++||||.. +|+.+=+.|++-. .+ .|....+.. ...|+++.++..+
T Consensus 191 ~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 191 SEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred cccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 36799999996 8999999999954 44 443321111 3467887765443
No 210
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=34.01 E-value=1.2e+02 Score=38.48 Aligned_cols=24 Identities=8% Similarity=0.191 Sum_probs=20.2
Q ss_pred hhHHHHHHHHHHHHhcCCeeeEEE
Q 002392 634 QFEAETRRHINRYAEAGLRTLVIA 657 (928)
Q Consensus 634 ~~~~~~~~~l~~~~~~Glr~l~~A 657 (928)
..+++..+.++.+.+.|.++.++.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miT 573 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILT 573 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEc
Confidence 457788888999999999998876
No 211
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=33.90 E-value=60 Score=29.65 Aligned_cols=38 Identities=29% Similarity=0.559 Sum_probs=29.4
Q ss_pred CCChHHHHHHHHHcCC-eEEEEcCCcHhhHHHHHHHcCC
Q 002392 712 QKGVPECIDKLAQAGI-KVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 712 r~~~~~aI~~l~~aGI-kv~ilTGD~~~ta~~ia~~~gi 749 (928)
.+.+.+.++++.+.|+ .+|+.+|...+.+...|++.|+
T Consensus 65 ~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi 103 (116)
T PF13380_consen 65 PDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGI 103 (116)
T ss_dssp HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCC
Confidence 4568899999999999 5899999888999999999887
No 212
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=32.69 E-value=2.9e+02 Score=28.77 Aligned_cols=39 Identities=18% Similarity=0.227 Sum_probs=31.0
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhh----HHHHHHHcCC
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMET----AINIGYACSL 749 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~t----a~~ia~~~gi 749 (928)
+-||+.+.++..-+.|.+|..+|-|..+. .+.-.++.|+
T Consensus 123 ~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~ 165 (274)
T COG2503 123 AVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGL 165 (274)
T ss_pred cCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCc
Confidence 45899999999999999999999998776 2333445555
No 213
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=32.66 E-value=1.4e+02 Score=28.22 Aligned_cols=80 Identities=15% Similarity=0.172 Sum_probs=56.6
Q ss_pred HHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHH
Q 002392 645 RYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQ 724 (928)
Q Consensus 645 ~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~ 724 (928)
.+...|++|+.++... +.+++. ..-.+.+-.++|+-.+--...+.+++.++.|++
T Consensus 26 ~lr~~G~eVi~LG~~v-p~e~i~------------------------~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~ 80 (137)
T PRK02261 26 ALTEAGFEVINLGVMT-SQEEFI------------------------DAAIETDADAILVSSLYGHGEIDCRGLREKCIE 80 (137)
T ss_pred HHHHCCCEEEECCCCC-CHHHHH------------------------HHHHHcCCCEEEEcCccccCHHHHHHHHHHHHh
Confidence 4568999999988543 333221 122346778899988888899999999999999
Q ss_pred cCC--eEEEEcCCc------HhhHHHHHHHcCC
Q 002392 725 AGI--KVWVLTGDK------METAINIGYACSL 749 (928)
Q Consensus 725 aGI--kv~ilTGD~------~~ta~~ia~~~gi 749 (928)
.|. ..|++-|.. +......++++|+
T Consensus 81 ~~~~~~~i~vGG~~~~~~~~~~~~~~~l~~~G~ 113 (137)
T PRK02261 81 AGLGDILLYVGGNLVVGKHDFEEVEKKFKEMGF 113 (137)
T ss_pred cCCCCCeEEEECCCCCCccChHHHHHHHHHcCC
Confidence 955 246666654 3445567888885
No 214
>PF12148 DUF3590: Protein of unknown function (DUF3590); InterPro: IPR021991 This domain is found in eukaryotes, and is typically between 83 and 97 amino acids in length. It is found in association with PF00097 from PFAM, PF02182 from PFAM, PF00628 from PFAM, PF00240 from PFAM. There are two conserved sequence motifs: RAR and NYN. The domain is part of the protein NIRF which has zinc finger and ubiquitinating domains. The function of this domain is likely to be mainly structural, however this has not been confirmed. ; PDB: 3DB4_A 3ASK_A 3DB3_A 2L3R_A.
Probab=32.27 E-value=31 Score=29.36 Aligned_cols=24 Identities=33% Similarity=0.511 Sum_probs=13.9
Q ss_pred EEEEeccccccCcEEEecCCcccC
Q 002392 149 FVETKWKNLRVGDLVKVHKDEYFP 172 (928)
Q Consensus 149 ~~~i~~~~L~vGDII~l~~ge~vP 172 (928)
...++|.+|.||++|.|.-+-.-|
T Consensus 58 Rt~l~w~~L~VG~~VMvNYN~d~P 81 (85)
T PF12148_consen 58 RTILKWDELKVGQVVMVNYNVDEP 81 (85)
T ss_dssp -SBE-GGG--TT-EEEEEE-TTST
T ss_pred eEeccHHhCCcccEEEEecCCCCc
Confidence 455899999999999997654443
No 215
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=31.91 E-value=1.2e+02 Score=24.06 Aligned_cols=39 Identities=23% Similarity=0.274 Sum_probs=28.5
Q ss_pred eeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002392 281 VMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSV 319 (928)
Q Consensus 281 i~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i 319 (928)
.+.|....+.+++.+.+.+..+...+..+++++++++++
T Consensus 23 ~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 23 YGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred hCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 456666666678899999999888877777666666554
No 216
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=31.82 E-value=1.1e+02 Score=32.78 Aligned_cols=24 Identities=21% Similarity=0.303 Sum_probs=20.5
Q ss_pred CCEEEEEcCC-hhcHHHHHhCCeeE
Q 002392 859 GKTTLAIGDG-ANDVGMLQEADIGV 882 (928)
Q Consensus 859 g~~vlaiGDG-~ND~~ml~~A~vGI 882 (928)
...++||||. ..|+.+=+.|++-.
T Consensus 219 ~~~~lmIGD~~~tDI~~A~~aGi~s 243 (279)
T TIGR01452 219 PARTLMVGDRLETDILFGHRCGMTT 243 (279)
T ss_pred hhhEEEECCChHHHHHHHHHcCCcE
Confidence 3579999999 59999999999854
No 217
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=30.96 E-value=24 Score=35.17 Aligned_cols=29 Identities=34% Similarity=0.422 Sum_probs=25.3
Q ss_pred HHHHHHHH------hcCCCEEEEEcCChhcHHHHH
Q 002392 848 KALVTRLV------KGTGKTTLAIGDGANDVGMLQ 876 (928)
Q Consensus 848 K~~iv~~l------~~~g~~vlaiGDG~ND~~ml~ 876 (928)
|...++.+ +.....++++|||.||++|||
T Consensus 158 K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 158 KAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 88888888 345688999999999999997
No 218
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=29.89 E-value=79 Score=30.63 Aligned_cols=44 Identities=16% Similarity=-0.010 Sum_probs=37.9
Q ss_pred eecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 706 AVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 706 ~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
...=++||++.+.++.|++. +++++.|.-....|..+.+.++.-
T Consensus 54 ~~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 54 WYLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 34445899999999999955 999999999999999999888764
No 219
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=26.94 E-value=84 Score=34.77 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=34.3
Q ss_pred CCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHc-C
Q 002392 712 QKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC-S 748 (928)
Q Consensus 712 r~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~-g 748 (928)
-|++++.++.|+++|+++.++|+-....+..+.+.+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 589999999999999999999999999999988885 5
No 220
>PRK08508 biotin synthase; Provisional
Probab=26.89 E-value=5.4e+02 Score=27.54 Aligned_cols=44 Identities=18% Similarity=0.020 Sum_probs=29.5
Q ss_pred hHHHHHHHHHcCCe-EE------------EEcCCcHhh---HHHHHHHcCCcccCceEEE
Q 002392 715 VPECIDKLAQAGIK-VW------------VLTGDKMET---AINIGYACSLLRQEMKQIV 758 (928)
Q Consensus 715 ~~~aI~~l~~aGIk-v~------------ilTGD~~~t---a~~ia~~~gi~~~~~~~~~ 758 (928)
.++.+++|+++|+. +- +.||..++. ++..|+++|+-....-++.
T Consensus 101 ~~e~l~~Lk~aGld~~~~~lEt~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~sg~I~G 160 (279)
T PRK08508 101 SVEQLKELKKAGIFSYNHNLETSKEFFPKICTTHTWEERFQTCENAKEAGLGLCSGGIFG 160 (279)
T ss_pred CHHHHHHHHHcCCCEEcccccchHHHhcCCCCCCCHHHHHHHHHHHHHcCCeecceeEEe
Confidence 58999999999983 33 467766666 4456889997443333333
No 221
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=26.86 E-value=1.5e+02 Score=27.76 Aligned_cols=81 Identities=17% Similarity=0.181 Sum_probs=58.2
Q ss_pred HHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHH
Q 002392 645 RYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQ 724 (928)
Q Consensus 645 ~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~ 724 (928)
.|...|+.|+-.... .+.+++- ..-.|.+-..+|+-++-..--+.+++.++.|++
T Consensus 25 ~l~~~GfeVi~lg~~-~s~e~~v------------------------~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~ 79 (132)
T TIGR00640 25 AYADLGFDVDVGPLF-QTPEEIA------------------------RQAVEADVHVVGVSSLAGGHLTLVPALRKELDK 79 (132)
T ss_pred HHHhCCcEEEECCCC-CCHHHHH------------------------HHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHh
Confidence 467899999887744 2333322 233457888999999999999999999999999
Q ss_pred cCC-e-EEEEcCCcHhhHHHHHHHcCCc
Q 002392 725 AGI-K-VWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 725 aGI-k-v~ilTGD~~~ta~~ia~~~gi~ 750 (928)
+|. . .+|+-|-.+..-..-.+++|+.
T Consensus 80 ~g~~~i~vivGG~~~~~~~~~l~~~Gvd 107 (132)
T TIGR00640 80 LGRPDILVVVGGVIPPQDFDELKEMGVA 107 (132)
T ss_pred cCCCCCEEEEeCCCChHhHHHHHHCCCC
Confidence 986 3 3555555555445567888873
No 222
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=26.79 E-value=7e+02 Score=31.78 Aligned_cols=23 Identities=17% Similarity=-0.038 Sum_probs=20.0
Q ss_pred CCeEEEEeccccccCcEEEecCC
Q 002392 146 DHTFVETKWKNLRVGDLVKVHKD 168 (928)
Q Consensus 146 ~g~~~~i~~~~L~vGDII~l~~g 168 (928)
-|..+.+...|.+|-|.+.++..
T Consensus 137 ~GDiv~l~~Gd~IPaDg~ii~g~ 159 (884)
T TIGR01522 137 PGDLVCLSVGDRVPADLRIVEAV 159 (884)
T ss_pred cCCEEEecCCCEEeeeEEEEEcC
Confidence 47899999999999999999854
No 223
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=26.29 E-value=1.3e+02 Score=25.78 Aligned_cols=12 Identities=33% Similarity=0.365 Sum_probs=5.4
Q ss_pred ccccCcEEEecC
Q 002392 156 NLRVGDLVKVHK 167 (928)
Q Consensus 156 ~L~vGDII~l~~ 167 (928)
+|+|||-|....
T Consensus 37 ~L~~Gd~VvT~g 48 (84)
T TIGR00739 37 SLKKGDKVLTIG 48 (84)
T ss_pred hCCCCCEEEECC
Confidence 344444444433
No 224
>PRK11507 ribosome-associated protein; Provisional
Probab=26.03 E-value=63 Score=26.52 Aligned_cols=22 Identities=18% Similarity=0.157 Sum_probs=19.7
Q ss_pred CCeEEEEeccccccCcEEEecC
Q 002392 146 DHTFVETKWKNLRVGDLVKVHK 167 (928)
Q Consensus 146 ~g~~~~i~~~~L~vGDII~l~~ 167 (928)
||+...-.-+.|++||+|.+..
T Consensus 42 NGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 42 DGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred CCEEecccCCCCCCCCEEEECC
Confidence 8888888999999999999864
No 225
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=25.85 E-value=1.1e+03 Score=30.78 Aligned_cols=170 Identities=16% Similarity=0.130 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH-hcccCCCCCCchhhHHHHHHHHHHHhHHHHHHHHHhhhhHHHh-----c--ceeEE---
Q 002392 74 SLFEQFRRVANIYFLVVAFV-SFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRKQDIEAN-----N--RKVKV--- 142 (928)
Q Consensus 74 ~l~~qf~~~~n~~~l~~~il-~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~r~~~~~~~n-----~--~~~~v--- 142 (928)
.-|..+..+..++..++.++ .+.+.++...+.-++.++++..+--..+-+..++..+..+.-. + ....+
T Consensus 23 ~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~~~n~~~~~v~~~~~~~~~i~~~ 102 (1057)
T TIGR01652 23 EQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWK 102 (1057)
T ss_pred HHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHHHHhCcEEEEECCCCcEEEeeee
Confidence 44456666655555555443 5555455565566666666666666667777777777643331 1 11112
Q ss_pred -EccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCcc-ceeeccchhhc---cC-CChh
Q 002392 143 -YGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETN-LKLKRSLEATN---HL-RDEE 216 (928)
Q Consensus 143 -~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~-~~~K~~~~~~~---~~-~~~~ 216 (928)
++ -|..+.+...|.+|-|++.+...+.- ...-++++.-+|....-+..-.-.+. ........... .. ....
T Consensus 103 ~l~-~GDiv~l~~g~~iPaD~~ll~ss~~~--g~~~v~~s~l~GEs~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~ 179 (1057)
T TIGR01652 103 DLR-VGDIVKVKKDERIPADLLLLSSSEPD--GVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNA 179 (1057)
T ss_pred ccc-CCCEEEEcCCCcccceEEEEeccCCC--ceEEEEeeccCCeecceEeecchhhhccCChhhHhhceEEEEEcCCCC
Confidence 23 58899999999999999999975531 11235555444554333221110110 00000000000 00 1234
Q ss_pred hhccceEEEEeec----C-CCCceeEEEEEEEC-Ce
Q 002392 217 SFQKFTAVIKCED----P-NERLYSFVGTLQYE-GK 246 (928)
Q Consensus 217 ~~~~~~~~i~~e~----p-~~~~~~f~Gt~~~~-g~ 246 (928)
++..|.|++..+. | +.+...|.|+.+.+ |.
T Consensus 180 ~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~ 215 (1057)
T TIGR01652 180 SLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDW 215 (1057)
T ss_pred cceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCe
Confidence 4667889887654 1 34457788988887 44
No 226
>PF11694 DUF3290: Protein of unknown function (DUF3290); InterPro: IPR021707 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=25.61 E-value=2.7e+02 Score=26.71 Aligned_cols=63 Identities=13% Similarity=0.112 Sum_probs=32.2
Q ss_pred chhhHHHHHHHHHHHhHHHHHHHHHhhhhHHHhcceeEEEc-------cCCeEEEEeccccccCcEEEec
Q 002392 104 PSVLAPLIVVIGATMAKEGVEDWRRRKQDIEANNRKVKVYG-------QDHTFVETKWKNLRVGDLVKVH 166 (928)
Q Consensus 104 ~~~~~~l~~vl~i~~~~~~~~~~~r~~~~~~~n~~~~~v~r-------~~g~~~~i~~~~L~vGDII~l~ 166 (928)
|-.+..+++++++-.+.--++++++.++...-..+.+..++ -+-+.+.+.+..+.-|-||++.
T Consensus 46 yRDL~II~~L~ll~l~giq~~~y~~~~~~~~q~~~~~~fi~~vA~~~~V~~~~v~VNst~l~dG~iVki~ 115 (149)
T PF11694_consen 46 YRDLSIIALLLLLLLIGIQYSDYQQNQNQHSQSSQMVHFIESVAKDLGVSKEEVYVNSTALTDGMIVKIG 115 (149)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHHHHhCCChheEEEecccccCCeEEEEC
Confidence 33343334333333444456777766664433333332222 0234556677777777777776
No 227
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=25.38 E-value=1.5e+02 Score=26.67 Aligned_cols=13 Identities=31% Similarity=0.335 Sum_probs=6.9
Q ss_pred ccccCcEEEecCC
Q 002392 156 NLRVGDLVKVHKD 168 (928)
Q Consensus 156 ~L~vGDII~l~~g 168 (928)
+|++||-|....|
T Consensus 52 ~Lk~Gd~VvT~gG 64 (106)
T PRK05585 52 SLAKGDEVVTNGG 64 (106)
T ss_pred hcCCCCEEEECCC
Confidence 4556665554444
No 228
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=25.35 E-value=35 Score=27.62 Aligned_cols=20 Identities=30% Similarity=0.484 Sum_probs=11.1
Q ss_pred CCeEEEEeccccccCcEEEe
Q 002392 146 DHTFVETKWKNLRVGDLVKV 165 (928)
Q Consensus 146 ~g~~~~i~~~~L~vGDII~l 165 (928)
||+.+.-.-..|++||+|.+
T Consensus 38 NGe~e~rrg~Kl~~GD~V~~ 57 (65)
T PF13275_consen 38 NGEVETRRGKKLRPGDVVEI 57 (65)
T ss_dssp TTB----SS----SSEEEEE
T ss_pred CCEEccccCCcCCCCCEEEE
Confidence 78888888899999999999
No 229
>PF15584 Imm44: Immunity protein 44
Probab=24.97 E-value=33 Score=29.46 Aligned_cols=21 Identities=10% Similarity=0.064 Sum_probs=16.3
Q ss_pred cCcEEEecCCcccCceEEEEe
Q 002392 159 VGDLVKVHKDEYFPADLLLLS 179 (928)
Q Consensus 159 vGDII~l~~ge~vPaD~ilL~ 179 (928)
+.+-..|+.|++||||||==-
T Consensus 13 ~~~~~~I~SG~~iP~~GIwEP 33 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIWEP 33 (94)
T ss_pred CCCCCEEecCCCcccCCeEcc
Confidence 445678899999999998543
No 230
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=24.54 E-value=65 Score=31.28 Aligned_cols=32 Identities=25% Similarity=0.314 Sum_probs=26.9
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCcHhhHHHHH
Q 002392 713 KGVPECIDKLAQAGIKVWVLTGDKMETAINIG 744 (928)
Q Consensus 713 ~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia 744 (928)
+.+.++|+.+++.|++++-+||++-.....++
T Consensus 123 ~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~~~~ 154 (176)
T COG0279 123 KNVLKAIEAAKEKGMTVIALTGKDGGKLAGLL 154 (176)
T ss_pred HHHHHHHHHHHHcCCEEEEEecCCCccccccc
Confidence 57889999999999999999999866554444
No 231
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=23.80 E-value=5.6e+02 Score=23.36 Aligned_cols=95 Identities=17% Similarity=0.110 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHH
Q 002392 638 ETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPE 717 (928)
Q Consensus 638 ~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~ 717 (928)
...+.++.+...|+++.+++-+........ | .+.+......+.-...+.-... ...+|...-
T Consensus 29 ~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~-~---------------~~~~~~~l~~~~l~~~~~~~~~--~~~KP~~~~ 90 (132)
T TIGR01662 29 EVPDALAELKEAGYKVVIVTNQSGIGRGKF-S---------------SGRVARRLEELGVPIDVLYACP--HCRKPKPGM 90 (132)
T ss_pred CHHHHHHHHHHCCCEEEEEECCccccccHH-H---------------HHHHHHHHHHCCCCEEEEEECC--CCCCCChHH
Confidence 445677788889999888875432211100 0 1111112222211212222222 233443333
Q ss_pred HHHHHHHc-CCeE--EEEcCCcHhhHHHHHHHcCCc
Q 002392 718 CIDKLAQA-GIKV--WVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 718 aI~~l~~a-GIkv--~ilTGD~~~ta~~ia~~~gi~ 750 (928)
....+++. ++.. ++.=||....-+..|+.+|+.
T Consensus 91 ~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 91 FLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred HHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 33334444 3632 555699666778889999984
No 232
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=23.68 E-value=73 Score=33.30 Aligned_cols=23 Identities=22% Similarity=0.280 Sum_probs=19.7
Q ss_pred CEEEEEcCC-hhcHHHHHhCCeeE
Q 002392 860 KTTLAIGDG-ANDVGMLQEADIGV 882 (928)
Q Consensus 860 ~~vlaiGDG-~ND~~ml~~A~vGI 882 (928)
..++||||. .+|+.+=+.|++-.
T Consensus 214 ~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 214 NRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred ccEEEECCCcHHHHHHHHHCCCeE
Confidence 369999999 69999999988854
No 233
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=23.58 E-value=67 Score=32.20 Aligned_cols=29 Identities=24% Similarity=0.338 Sum_probs=23.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHh
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKME 738 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ 738 (928)
++-||+.+++++|.+.|..++++|+++..
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 46689999999999999999999998754
No 234
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=23.33 E-value=1.3e+02 Score=30.31 Aligned_cols=78 Identities=13% Similarity=0.182 Sum_probs=56.5
Q ss_pred HHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHH
Q 002392 645 RYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQ 724 (928)
Q Consensus 645 ~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~ 724 (928)
-+...|++|+.++. .++.+++-+ .-.+.+-.++|+-+.-..--+..++.|+.|++
T Consensus 107 ~l~~~G~~vi~LG~-~vp~e~~v~------------------------~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~ 161 (197)
T TIGR02370 107 MLRANGFDVIDLGR-DVPIDTVVE------------------------KVKKEKPLMLTGSALMTTTMYGQKDINDKLKE 161 (197)
T ss_pred HHHhCCcEEEECCC-CCCHHHHHH------------------------HHHHcCCCEEEEccccccCHHHHHHHHHHHHH
Confidence 46779999999873 344443322 12245778899999988888999999999999
Q ss_pred cCCe---EEEEcCCcHhhHHHHHHHcCC
Q 002392 725 AGIK---VWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 725 aGIk---v~ilTGD~~~ta~~ia~~~gi 749 (928)
+|.. .+++-|.... ...++++|-
T Consensus 162 ~~~~~~v~i~vGG~~~~--~~~~~~~ga 187 (197)
T TIGR02370 162 EGYRDSVKFMVGGAPVT--QDWADKIGA 187 (197)
T ss_pred cCCCCCCEEEEEChhcC--HHHHHHhCC
Confidence 9874 5677776653 356777765
No 235
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=23.26 E-value=4.8e+02 Score=31.13 Aligned_cols=83 Identities=19% Similarity=0.298 Sum_probs=48.8
Q ss_pred hhHHHHHHHHHHHHhcC-CeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCC
Q 002392 634 QFEAETRRHINRYAEAG-LRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQ 712 (928)
Q Consensus 634 ~~~~~~~~~l~~~~~~G-lr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr 712 (928)
..++...+.++.+.+.| +++.+++- +.....+...+.+.-+-.|-++ .-
T Consensus 384 ~~~~g~~e~l~~L~~~g~i~v~ivTg------------------------d~~~~a~~i~~~lgi~~~f~~~------~p 433 (556)
T TIGR01525 384 QLRPEAKEAIAALKRAGGIKLVMLTG------------------------DNRSAAEAVAAELGIDEVHAEL------LP 433 (556)
T ss_pred cchHhHHHHHHHHHHcCCCeEEEEeC------------------------CCHHHHHHHHHHhCCCeeeccC------CH
Confidence 35667778889999999 99888772 2222223333333222222221 11
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcC
Q 002392 713 KGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACS 748 (928)
Q Consensus 713 ~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~g 748 (928)
++-.+.++++++.|- .++..||....+... +..|
T Consensus 434 ~~K~~~v~~l~~~~~-~v~~vGDg~nD~~al-~~A~ 467 (556)
T TIGR01525 434 EDKLAIVKELQEEGG-VVAMVGDGINDAPAL-AAAD 467 (556)
T ss_pred HHHHHHHHHHHHcCC-EEEEEECChhHHHHH-hhCC
Confidence 233578888888776 556669988766554 4445
No 236
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=22.77 E-value=1e+02 Score=27.70 Aligned_cols=84 Identities=19% Similarity=0.300 Sum_probs=51.2
Q ss_pred CceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEE
Q 002392 537 GEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLL 616 (928)
Q Consensus 537 ~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 616 (928)
....|.++=..+..|+++|.- ..|+.+.+..-++-.+..+-++..+.|.-.+.
T Consensus 17 a~L~YeGSitID~~Ll~aagi---------------------------~~~E~V~I~Nv~NG~Rf~TYvI~g~~gSg~I~ 69 (111)
T cd06919 17 ADLNYEGSITIDEDLLEAAGI---------------------------LPYEKVLVVNVNNGARFETYVIPGERGSGVIC 69 (111)
T ss_pred cccccceeEEECHHHHHhcCC---------------------------CCCCEEEEEECCCCcEEEEEEEEcCCCCCEEE
Confidence 356788877788888887643 22333334444444444444455444443444
Q ss_pred EecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHH
Q 002392 617 CKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIW 669 (928)
Q Consensus 617 ~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~ 669 (928)
.-||. ..+.+.|=|++.+||-.++++|...|
T Consensus 70 lNGAA----------------------Ar~~~~GD~vII~sy~~~~~~e~~~~ 100 (111)
T cd06919 70 LNGAA----------------------ARLGQPGDRVIIMAYALMDEEEAEGH 100 (111)
T ss_pred eCCHH----------------------HhcCCCCCEEEEEECccCCHHHHhcC
Confidence 45664 23456788999999999999876543
No 237
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=22.35 E-value=43 Score=28.46 Aligned_cols=21 Identities=33% Similarity=0.533 Sum_probs=15.9
Q ss_pred eccccccCcEEEec-CCcccCc
Q 002392 153 KWKNLRVGDLVKVH-KDEYFPA 173 (928)
Q Consensus 153 ~~~~L~vGDII~l~-~ge~vPa 173 (928)
.-.+|.+||.|.|. .||.||-
T Consensus 46 ~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 46 KELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHTT-BBT-EEEEEEETTTEEE
T ss_pred HHcCCCCCCEEEEEECCCccce
Confidence 44789999999886 6999996
No 238
>PF13253 DUF4044: Protein of unknown function (DUF4044)
Probab=22.23 E-value=2.9e+02 Score=19.42 Aligned_cols=18 Identities=28% Similarity=0.464 Sum_probs=11.5
Q ss_pred CCcccHHHHHHHHHHHHH
Q 002392 289 PSKRSKIERKMDKIVYLL 306 (928)
Q Consensus 289 ~~k~s~~~~~~~~~~~~~ 306 (928)
+.|+|.+|+...-++.++
T Consensus 3 kkkKS~fekiT~v~v~lM 20 (35)
T PF13253_consen 3 KKKKSTFEKITMVVVWLM 20 (35)
T ss_pred CccccHHHHHHHHHHHHH
Confidence 467788888765544443
No 239
>PF02261 Asp_decarbox: Aspartate decarboxylase; InterPro: IPR003190 Decarboxylation of aspartate is the major route of alanine production in bacteria, and is catalysed by the enzyme aspartate decarboxylase. The enzyme is translated as an inactive proenzyme of two chains, A and B. This family contains both chains of aspartate decarboxylase.; GO: 0004068 aspartate 1-decarboxylase activity, 0006523 alanine biosynthetic process; PDB: 1PYU_C 1AW8_A 1PYQ_B 3TM7_C 1PT1_A 1PQH_A 1PPY_B 1PT0_B 1PQF_A 1PQE_A ....
Probab=22.11 E-value=37 Score=30.69 Aligned_cols=84 Identities=17% Similarity=0.334 Sum_probs=46.5
Q ss_pred ceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEE
Q 002392 538 EISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLC 617 (928)
Q Consensus 538 ~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~ 617 (928)
...|.++=..+..|+++|.-+- |+.+.+..-++--+..+-++..+.|.-.+..
T Consensus 19 ~L~Y~GSitID~~Ll~aagi~p---------------------------~E~V~V~Nv~nG~Rf~TYvI~g~~GSg~I~l 71 (116)
T PF02261_consen 19 DLNYEGSITIDEDLLDAAGILP---------------------------YEQVQVVNVNNGERFETYVIPGERGSGVICL 71 (116)
T ss_dssp ETTSTSCEEEEHHHHHHCT--T---------------------------TBEEEEEETTT--EEEEEEEEESTTTT-EEE
T ss_pred ccccceeeEECHHHHHHcCCCc---------------------------CCEEEEEECCCCcEEEEEEEEccCCCcEEEE
Confidence 3456666667778887764322 3333344444444444555555544334444
Q ss_pred ecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHH
Q 002392 618 KGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWE 670 (928)
Q Consensus 618 KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~ 670 (928)
-||... +.+.|=+++.+||..++++|...|+
T Consensus 72 NGaAAr----------------------l~~~GD~vII~sy~~~~~~e~~~~~ 102 (116)
T PF02261_consen 72 NGAAAR----------------------LVQVGDRVIIMSYAQVDEEEAKNHK 102 (116)
T ss_dssp EGGGGG----------------------CS-TT-EEEEEEEEEEEHHHHHH--
T ss_pred CCHHHh----------------------ccCCCCEEEEEEcccCCHHHHhhCC
Confidence 577632 2456789999999999999887664
No 240
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=21.92 E-value=1.8e+02 Score=29.41 Aligned_cols=78 Identities=21% Similarity=0.336 Sum_probs=56.0
Q ss_pred HHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHH
Q 002392 645 RYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQ 724 (928)
Q Consensus 645 ~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~ 724 (928)
-+...|++|+.++ ..++.+++-+ .-.+.+-.++|+.+.-..--+.+++.|+.+++
T Consensus 105 ~l~~~G~~vi~lG-~~~p~~~l~~------------------------~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~ 159 (201)
T cd02070 105 MLEANGFEVIDLG-RDVPPEEFVE------------------------AVKEHKPDILGLSALMTTTMGGMKEVIEALKE 159 (201)
T ss_pred HHHHCCCEEEECC-CCCCHHHHHH------------------------HHHHcCCCEEEEeccccccHHHHHHHHHHHHH
Confidence 4678999998777 4555554332 12235778999999888888999999999999
Q ss_pred cCC--eE-EEEcCCcHhhHHHHHHHcCC
Q 002392 725 AGI--KV-WVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 725 aGI--kv-~ilTGD~~~ta~~ia~~~gi 749 (928)
.+. ++ +++=|..... ..+.++|-
T Consensus 160 ~~~~~~~~i~vGG~~~~~--~~~~~~Ga 185 (201)
T cd02070 160 AGLRDKVKVMVGGAPVNQ--EFADEIGA 185 (201)
T ss_pred CCCCcCCeEEEECCcCCH--HHHHHcCC
Confidence 987 55 5666655432 47777775
No 241
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=21.90 E-value=1e+02 Score=28.28 Aligned_cols=84 Identities=14% Similarity=0.272 Sum_probs=51.2
Q ss_pred CceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEE
Q 002392 537 GEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLL 616 (928)
Q Consensus 537 ~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 616 (928)
....|.++=-.+..|++.|.-+ .|+.+.+..-++-.+.-+-++..+.|.-.+.
T Consensus 18 a~L~Y~GSItID~~Lm~aagi~---------------------------p~E~V~V~Nv~NG~Rf~TYvI~G~~GSg~I~ 70 (126)
T TIGR00223 18 ANLNYEGSITIDEDLLDAAGIL---------------------------ENEKVDIVNVNNGKRFSTYAIAGKRGSRIIC 70 (126)
T ss_pred cccccceeEEECHHHHHhcCCC---------------------------CCCEEEEEECCCCcEEEEEEEEcCCCCCEEE
Confidence 3567888777888888876432 2333333333343334444444443333444
Q ss_pred EecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHH
Q 002392 617 CKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIW 669 (928)
Q Consensus 617 ~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~ 669 (928)
.-||. ..+.+.|=+++.+||-.++++|...|
T Consensus 71 lNGAA----------------------Arl~~~GD~VII~sy~~~~~~e~~~~ 101 (126)
T TIGR00223 71 VNGAA----------------------ARCVSVGDIVIIASYVTMPDEEARTH 101 (126)
T ss_pred eCCHH----------------------HhcCCCCCEEEEEECCcCCHHHHhcC
Confidence 44664 23466788999999999999886544
No 242
>PLN02645 phosphoglycolate phosphatase
Probab=21.79 E-value=1.4e+02 Score=32.67 Aligned_cols=51 Identities=18% Similarity=0.213 Sum_probs=34.5
Q ss_pred CCEEEEEcCCh-hcHHHHHhCCeeE-Ee-cCCcch-hhh-----hcCcEeecccccchhh
Q 002392 859 GKTTLAIGDGA-NDVGMLQEADIGV-GI-SGVEGM-QAV-----MSSDYAIAQFRFLERL 909 (928)
Q Consensus 859 g~~vlaiGDG~-ND~~ml~~A~vGI-am-~g~e~~-~ak-----~aAD~vi~~f~~l~~l 909 (928)
...++||||.. +|+.+=+.||+-- .+ .|.... +.. ..+|+++.++..|..+
T Consensus 247 ~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~ 306 (311)
T PLN02645 247 KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTL 306 (311)
T ss_pred cccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHH
Confidence 35799999997 9999999999743 44 343221 111 3478988877666554
No 243
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=21.68 E-value=4.8e+02 Score=28.46 Aligned_cols=53 Identities=15% Similarity=0.129 Sum_probs=42.0
Q ss_pred cCceEEEEeeecccCCCChHH---HHHHHHHcCCeEEEE-cCCcHhhHHHHHHHcCC
Q 002392 697 RDLILLGATAVEDKLQKGVPE---CIDKLAQAGIKVWVL-TGDKMETAINIGYACSL 749 (928)
Q Consensus 697 ~~l~llG~~~ieD~lr~~~~~---aI~~l~~aGIkv~il-TGD~~~ta~~ia~~~gi 749 (928)
-++..+|.+.+...-.|..++ .++.+++.+|++++. +.-+...+..+++++|.
T Consensus 220 ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~la~e~g~ 276 (311)
T PRK09545 220 YGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVIESVAKGTSV 276 (311)
T ss_pred CCCceeeeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEecCCCChHHHHHHHHhcCC
Confidence 377888888777666665544 888999999998886 55667889999999996
No 244
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=21.50 E-value=4.1e+02 Score=28.62 Aligned_cols=54 Identities=4% Similarity=-0.066 Sum_probs=42.3
Q ss_pred cCceEEEEeeecccCCCCh---HHHHHHHHHcCCeEEEE-cCCcHhhHHHHHHHcCCc
Q 002392 697 RDLILLGATAVEDKLQKGV---PECIDKLAQAGIKVWVL-TGDKMETAINIGYACSLL 750 (928)
Q Consensus 697 ~~l~llG~~~ieD~lr~~~---~~aI~~l~~aGIkv~il-TGD~~~ta~~ia~~~gi~ 750 (928)
-+|..+|++++...-.+.. .+.++.+++.|+++++. .+-+...+..+|+++|+-
T Consensus 194 yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~gv~ 251 (287)
T cd01137 194 YGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVNDRLMKQVAKETGAK 251 (287)
T ss_pred cCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCChHHHHHHHHHhCCc
Confidence 4788899888765555554 67788889999998766 666777889999999973
No 245
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=21.41 E-value=1.1e+02 Score=28.18 Aligned_cols=84 Identities=15% Similarity=0.286 Sum_probs=51.7
Q ss_pred CceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEE
Q 002392 537 GEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLL 616 (928)
Q Consensus 537 ~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 616 (928)
....|.++=..+..|++.|.-+ .|+.+.+..-++-.+..+-++..+.|.-.+.
T Consensus 18 a~L~Y~GSitID~~Ll~aagi~---------------------------p~E~V~V~Nv~NG~Rf~TYvI~g~~GSg~I~ 70 (126)
T PRK05449 18 ADLNYEGSITIDEDLLDAAGIL---------------------------ENEKVQIVNVNNGARFETYVIAGERGSGVIC 70 (126)
T ss_pred cccccceeEEECHHHHHhcCCC---------------------------CCCEEEEEECCCCcEEEEEEEEcCCCCCEEE
Confidence 3567888777888888876432 2333333443444444444455444443444
Q ss_pred EecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHH
Q 002392 617 CKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIW 669 (928)
Q Consensus 617 ~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~ 669 (928)
.-||. ..+.+.|=+++.+||-.++++|...|
T Consensus 71 lNGAA----------------------Ar~~~~GD~vII~ay~~~~~~e~~~~ 101 (126)
T PRK05449 71 LNGAA----------------------ARLVQVGDLVIIAAYAQMDEEEAKTH 101 (126)
T ss_pred eCCHH----------------------HhcCCCCCEEEEEECccCCHHHHhcC
Confidence 45664 23456788999999999999886544
No 246
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=21.32 E-value=1.3e+02 Score=27.43 Aligned_cols=36 Identities=8% Similarity=0.171 Sum_probs=27.2
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcC
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACS 748 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~g 748 (928)
=-+++.++++.+++.|++++.+|++.. ....+.+-|
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~ 90 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHG 90 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcC
Confidence 346788999999999999999999874 333455444
No 247
>KOG1419 consensus Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism]
Probab=21.09 E-value=2.2e+02 Score=33.07 Aligned_cols=28 Identities=21% Similarity=0.284 Sum_probs=21.4
Q ss_pred cEEEecCCcccCceEEEEeeeCCCceEEEEeccCCC
Q 002392 161 DLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDG 196 (928)
Q Consensus 161 DII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtG 196 (928)
||| .+||++.+|.... +|.+ +++|.|.|
T Consensus 173 Dii------vi~Asi~vl~~g~-qG~v-fatSalrs 200 (654)
T KOG1419|consen 173 DII------VIIASIAVLAAGS-QGNV-FATSALRS 200 (654)
T ss_pred EEe------eeeeeeeEEEecC-ccce-eehhhhhh
Confidence 888 6899999998763 3554 88888875
No 248
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=21.04 E-value=59 Score=25.11 Aligned_cols=13 Identities=23% Similarity=0.577 Sum_probs=10.7
Q ss_pred ccCcEEEecCCcc
Q 002392 158 RVGDLVKVHKDEY 170 (928)
Q Consensus 158 ~vGDII~l~~ge~ 170 (928)
++||+|+|+.|-.
T Consensus 2 ~~GDvV~LKSGGp 14 (53)
T PF09926_consen 2 KIGDVVQLKSGGP 14 (53)
T ss_pred CCCCEEEEccCCC
Confidence 5899999998864
No 249
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=20.70 E-value=6e+02 Score=23.05 Aligned_cols=28 Identities=21% Similarity=0.206 Sum_probs=23.7
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCcHhhH
Q 002392 713 KGVPECIDKLAQAGIKVWVLTGDKMETA 740 (928)
Q Consensus 713 ~~~~~aI~~l~~aGIkv~ilTGD~~~ta 740 (928)
+++.++++.+++.|++++.+|+......
T Consensus 74 ~~~~~~~~~a~~~g~~iv~iT~~~~~~l 101 (139)
T cd05013 74 KETVEAAEIAKERGAKVIAITDSANSPL 101 (139)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCCChh
Confidence 5688899999999999999999875433
No 250
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=20.55 E-value=2.1e+02 Score=24.80 Aligned_cols=25 Identities=24% Similarity=0.348 Sum_probs=19.9
Q ss_pred EeeecccCCCChHHHHHHHHHcCCe
Q 002392 704 ATAVEDKLQKGVPECIDKLAQAGIK 728 (928)
Q Consensus 704 ~~~ieD~lr~~~~~aI~~l~~aGIk 728 (928)
.+++.....|.+.+++++|++.|++
T Consensus 36 ~~a~~~~~~P~i~~~l~~l~~~g~~ 60 (101)
T cd03409 36 YVGFQSGLGPDTEEAIRELAEEGYQ 60 (101)
T ss_pred EEEEECCCCCCHHHHHHHHHHcCCC
Confidence 4445555789999999999999974
No 251
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=20.40 E-value=1.6e+02 Score=24.87 Aligned_cols=46 Identities=28% Similarity=0.318 Sum_probs=35.0
Q ss_pred EeeecccCCCChHHHHHHHHHcCCeEEE-EcCCcHhhHHHHHHHcCC
Q 002392 704 ATAVEDKLQKGVPECIDKLAQAGIKVWV-LTGDKMETAINIGYACSL 749 (928)
Q Consensus 704 ~~~ieD~lr~~~~~aI~~l~~aGIkv~i-lTGD~~~ta~~ia~~~gi 749 (928)
++.+.+...+.+.+..+.|+++|+.+.+ ..+++.......|...|+
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~ 52 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKI 52 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCC
Confidence 3445566777888888999999999887 566777777777887776
No 252
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=20.28 E-value=4.5e+02 Score=27.17 Aligned_cols=35 Identities=20% Similarity=0.151 Sum_probs=29.2
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHH
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGY 745 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~ 745 (928)
+-||+.+.++.|+..||.+.++|+.+..++..--.
T Consensus 93 ~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~ 127 (222)
T KOG2914|consen 93 LMPGAEKLVNHLKNNGIPVALATSSTSASFELKIS 127 (222)
T ss_pred cCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHH
Confidence 45699999999999999999999998776644433
No 253
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=20.24 E-value=3.6e+02 Score=34.43 Aligned_cols=117 Identities=12% Similarity=0.100 Sum_probs=69.7
Q ss_pred HHHHHHH-HHHHHHHHHHHHHhcccCCCCCCch--------hhHHHHHHHHHHHhHHHHHHHHHhhhhHHHhcceeEEEc
Q 002392 74 SLFEQFR-RVANIYFLVVAFVSFSPLAPYSAPS--------VLAPLIVVIGATMAKEGVEDWRRRKQDIEANNRKVKVYG 144 (928)
Q Consensus 74 ~l~~qf~-~~~n~~~l~~~il~~~~~~~~~~~~--------~~~~l~~vl~i~~~~~~~~~~~r~~~~~~~n~~~~~v~r 144 (928)
.+|..|. .+.+.+.++..+...+.+ -.+++. .+.-.++++++..+...+..++.+++.+.+..-+-.+-
T Consensus 70 ~~~~~~l~~f~~~~~~iL~~aa~ls~-~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~- 147 (903)
T PRK15122 70 HALVQLLQAFNNPFIYVLMVLAAISF-FTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVR- 147 (903)
T ss_pred CHHHHHHHHHHhHHHHHHHHHHHHHH-HHHHHhhccCCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence 4555554 355555555555554421 111111 24455667777888888999999999988886553221
Q ss_pred cCCeEEEEeccc--cccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCc
Q 002392 145 QDHTFVETKWKN--LRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGET 198 (928)
Q Consensus 145 ~~g~~~~i~~~~--L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs 198 (928)
. ...+-... -.-|....|...|.+|-|.++++.- ..+-+|=-.+.|+.
T Consensus 148 -~--~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~G---d~IPaDg~li~g~~ 197 (903)
T PRK15122 148 -T--TATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAG---DMIPADVRLIESRD 197 (903)
T ss_pred -C--ceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCC---CEEeeeEEEEEcCc
Confidence 1 22222221 0125789999999999999999854 33555555555544
Done!