Query         002393
Match_columns 928
No_of_seqs    256 out of 845
Neff          5.3 
Searched_HMMs 46136
Date          Thu Mar 28 23:01:05 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002393.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002393hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG1888 Putative phosphoinosit 100.0  3E-190  6E-195 1623.6  46.5  829   46-926     9-861 (868)
  2 KOG1889 Putative phosphoinosit 100.0  1E-118  2E-123 1001.1  36.3  496   52-649     2-503 (579)
  3 COG5329 Phosphoinositide polyp 100.0  3E-105  6E-110  907.1  41.7  500   54-652     2-513 (570)
  4 KOG1890 Phosphoinositide phosp 100.0 2.3E-98  5E-103  834.8  30.7  486   55-645     1-542 (949)
  5 KOG0566 Inositol-1,4,5-triphos 100.0 8.3E-90 1.8E-94  799.6  36.9  450  123-667    57-527 (1080)
  6 PF02383 Syja_N:  SacI homology 100.0 4.1E-75   9E-80  639.9  23.4  295  126-428     1-316 (319)
  7 PF15214 PXT1:  Peroxisomal tes  24.1      25 0.00055   29.3  -0.0   10  228-237    42-51  (51)
  8 KOG0566 Inositol-1,4,5-triphos  21.7      81  0.0018   40.6   3.6   13  566-578   599-612 (1080)
  9 PF09055 Sod_Ni:  Nickel-contai  20.5      40 0.00086   33.7   0.5   41  873-921    13-56  (128)
 10 COG0050 TufB GTPases - transla  17.6      76  0.0016   36.2   1.9   49  867-915   133-186 (394)

No 1  
>KOG1888 consensus Putative phosphoinositide phosphatase [Lipid transport and metabolism]
Probab=100.00  E-value=3e-190  Score=1623.65  Aligned_cols=829  Identities=49%  Similarity=0.754  Sum_probs=742.1

Q ss_pred             CCCcceeeeEEEEEeCCEEEEEecCCCCcceEEEEEeCCCCCCCccccCCcccCHHHHHHHHHhhhcCCccCCCccceeE
Q 002393           46 DPNSYSLEKFKLYETRARFYLIGSDRNKRFFRVLKIDRSEPSDLNISEDPVVYSPQEIKNLLQRISEGNRATGGLTFVAK  125 (928)
Q Consensus        46 ~~~~~~~~~f~LyeT~~rfyiv~s~~~~~~~rvLkIDR~~~~~L~i~Ed~~~ys~~e~~~lL~~i~egn~~~ggl~~v~~  125 (928)
                      .|..+.+|+|+||||++||||||+|..++.||||||||++|++|+|.||.++|+.+||.++|.+|++||+++|||++++.
T Consensus         9 ~~~~Ss~~k~~lyETrar~YlIGsn~s~t~yrVLkIDrt~p~~Lni~ed~~~yt~~Ei~elL~~i~~g~~~tgGl~~~t~   88 (868)
T KOG1888|consen    9 NPLTSSLQKFVLYETRARFYLIGSNNSETRYRVLKIDRTEPSELNISEDSVVYTSEEIRELLARISEGNRATGGLKKVTS   88 (868)
T ss_pred             CccccceeEEEEEEecceEEEEeecCCCceEEEEEeccCCchhhccCCCccccCHHHHHHHHHHHhcCCccCCceeeeee
Confidence            44445699999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEEEEEcCceEEEEEeceeEeeeecCceEEEEeeeeeEecCCCCcCcccccchhHHHHHHHhhccCCCCceEEecc
Q 002393          126 VFGIAGCIKFLESYYLILVTKRRQIGCICGHAIYSIDESQLITIPHVSIQSDVAHSKTELRYKKLLSSVDLTKDFYYSYT  205 (928)
Q Consensus       126 ~yGIlG~Ir~l~~~YLlVIT~r~~VG~I~Gh~IY~I~~t~~Ipi~~~~~~~~~~~skdE~ry~kLL~~vdlt~~FYFSyt  205 (928)
                      +||||||++|+++||||+||+++.||.|+||.||+|.+++||+|++..++.+   .++|.+|+++|+.|||+++||||||
T Consensus        89 ayGIlGfvkFle~YYLlliTkr~~ia~iggH~VY~I~es~mI~I~~~~vq~~---~~~e~r~~r~fq~vDLt~~FYFSYS  165 (868)
T KOG1888|consen   89 AYGILGFVKFLEGYYLLLITKRRQIADIGGHAVYTIDESQMIPIPNDTVQPN---HANEARYLRYFQNVDLTKDFYFSYS  165 (868)
T ss_pred             eeeeeeEEEecCceEEEEEEcccccccccCceeEEEccceEEEccCCCcCCC---CccHHHHHHHHhhcccccceeEEee
Confidence            9999999999999999999999999999999999999999999999988765   6789999999999999999999999


Q ss_pred             cCccchhhhhhhccccCCCCcc-----cccccchhccHHHHhccCCCceEEEeeeeEEEeEEEEEeeceeEEEEEEeecc
Q 002393          206 YPIMQSLQKNVLSMAEEGMPYE-----NIFVWNAYLTQPIRLRCKNTIWTIALVHGHFKQIRLSIFGRDFSVSLISRRSR  280 (928)
Q Consensus       206 YDLT~SlQ~n~~~~~~~~~~yd-----~rFvWN~~Ll~~~r~~l~~~~w~vpLIqGfv~q~~~~i~g~~~~ltLISRRS~  280 (928)
                      ||||+|||.|......+...++     .|||||+||++||++++.+..|++.||||||+|..+++.|+.+.+|||||||+
T Consensus       166 YditrslQ~N~~~~~~~~~~~~~~~~~~~FVWN~~Ll~pir~~~~~~~W~v~lvhGf~~Q~~lsi~Gr~~~vtLiARRSr  245 (868)
T KOG1888|consen  166 YDITRSLQKNILRSRLGGPDYEKLEADEMFVWNSFLLQPIRSILLNTDWTVALVHGFFKQSPLSISGRDFYVTLIARRSR  245 (868)
T ss_pred             hhhhhhhcccccccccCCcchhhhcccceeEehHhHhHHHHHhccchhHHHHHHhhhhccceehhcCceeEEEEEEeccc
Confidence            9999999999887665555554     49999999999999998888999999999999999999999999999999999


Q ss_pred             cccccccccccCCCCCCcceeeeeeEEEEccccCCCCCcEEEEEEEecCcceeeEecCCCCCCccceEecCCCccHHHHH
Q 002393          281 HFAGTRYLKRGVNDRGRVANDVETEQVVLDEEAGSCKGKMSSVVQMRGSIPLFWSQEASRFSPKPDIILQRYDPTYQATK  360 (928)
Q Consensus       281 ~rAGTRY~~RGIDddG~VANfVETEQIV~~~~~~~~~~~isSfVQiRGSIPLfWsQ~~~~l~~KP~I~l~~~d~~~~A~~  360 (928)
                      |+|||||+|||||..|+|||+|||||||+++..++.+++++||||+||||||||+|+++++.+||+|.+...||+|++++
T Consensus       246 ~fAGTRfLKRG~N~~G~VANeVETEQIV~d~~~~~~~~~~sS~VQ~RGSIPl~WsQd~S~~~~KP~I~l~~~DP~y~~a~  325 (868)
T KOG1888|consen  246 HFAGTRFLKRGANSCGDVANEVETEQIVSDDVPGFHAGRISSFVQMRGSIPLFWSQDASRMVPKPDIVLDKRDPFYETAA  325 (868)
T ss_pred             ccccchHHhccCCCCCCcccceeeeeeEecCcCCCCccceeeeeeccccccceeccchhhcCCCCCeEEeccCCccchHH
Confidence            99999999999999999999999999999998777888999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhCCcEEEEecccCccCCchhhHHHHHHHHHHHHhhhcCCcCCCeEEEecccchhhhcccchHHHHHHHHHH
Q 002393          361 MHFEDLAKRYGNPIIVLNLIKTVEKRPREMMLRREFANAVGYLNTILSEENQVRFIHWDFHKFAKSKSANVLAVLGGVAS  440 (928)
Q Consensus       361 kHF~~L~~rYG~pIiiVNLLk~~Ekk~~E~~L~~~F~~aV~~ln~~lp~e~~I~Yi~FDfHk~~K~k~~nvl~~L~~va~  440 (928)
                      .||++|.+|||+||+||||||++||+++|++|+++|+++|+|||++||++++++|+|||||+..|.+..||+.+|+++|.
T Consensus       326 lHF~~L~~RYG~PIiilNLIKt~ekr~~E~IL~~eF~~ai~yLNqflp~e~rl~~i~wD~hk~~Ks~~~nVle~L~~~a~  405 (868)
T KOG1888|consen  326 LHFDNLVQRYGNPIIILNLIKTNEKRPRESILREEFENAIDYLNQFLPPENRLKYIHWDMHKHSKSKGQNVLEVLEKVAE  405 (868)
T ss_pred             HHHHHHHHhcCCcEEEEEeeccccCCchhHHHHHHHHHHHHHHhccCCCcceeeeeechHHhhhccCcccHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhccccceeeCCCcccccccchhhhcccccCCccccccCCCCCCCCCCcccccccccccCCCCCCCCCcceeceEEeec
Q 002393          441 EALDLTGFYYSGKSCITKKRTSQLRDLRASSGDLARVGSCNESLNSVGSRERDADFYQQSKTNSPDGAAPCFQSGVLRTN  520 (928)
Q Consensus       441 ~~l~~~gff~~~~~~~~~~~~~~l~~~r~~s~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~Q~GV~RTN  520 (928)
                      .++.++|+|+..+..    +.        .+...++..+.++                  -.+  ..++.+.|+||+|||
T Consensus       406 ~~v~~tG~f~~~~~~----~~--------~~~~~~~~~~~dd------------------~~g--~~~~~rlQ~GIlRtN  453 (868)
T KOG1888|consen  406 SAVMLTGIFFNMPLR----DS--------LKLSPSPHESADD------------------IEG--DVKPPRLQSGILRTN  453 (868)
T ss_pred             hhHhhhceeecccch----hh--------hhcCCCccccccc------------------ccc--cccchhhcccceecc
Confidence            999999999873211    00        0000001101000                  001  135688999999999


Q ss_pred             cCccchhhhHHHHHHHHHHHHHHHHHcCCCCCCCCCCCchHHHHHHHHHHHHhhHHHHHhcCCccccccccccccccccc
Q 002393          521 CIDCLDRTNVAQYAYGLAALGRQLHAMGLTDMPKVNPNSSIAAALMDMYQSMGDALAQQYGGSAAHNTLRRVSYECQVFP  600 (928)
Q Consensus       521 CiDCLDRTNV~Q~~ig~~aL~~QL~~LGi~~~~~i~~ds~~~~~l~~lwadnGD~IS~QYaGT~Alktl~~~~~~~~~F~  600 (928)
                      |+|||||||||||++|++||++||++|||++.|++++|++++..|++||++|||++|+|||||+|+++         +|+
T Consensus       454 CiDCLDRTN~AQf~~Gk~ALg~QL~~LGi~D~p~lelDs~~v~~L~dLye~~GDtlAlQYgGS~lvh~---------v~t  524 (868)
T KOG1888|consen  454 CIDCLDRTNVAQFAIGKAALGCQLHALGISDKPNLELDSDIVSLLEDLYEEHGDTLALQYGGSQLVHS---------VKT  524 (868)
T ss_pred             chhhcccccHHHHHHHHHHHHHHHHHccCccCcccccCcHHHHHHHHHHHHhhhHHHHHhchhhhhhh---------hhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999         887


Q ss_pred             cccCccccccchhHHHHHHHHHhhcccCchhhhhHHHhhhccccCCCCCCcccccCcceeeeecCCCCCC--------CC
Q 002393          601 ERQGKWKATTQSREFLKSIKRYYSNAYTDGEKQDAINLFLGYFQPQEGKPALWELDSDYYLHVSGIGDDL--------FP  672 (928)
Q Consensus       601 ~R~Gk~~~~~~s~D~~~Sl~RYY~NnF~D~~KQdaInLfLG~~~p~~g~p~lwel~sD~ylh~~~~~~~~--------~~  672 (928)
                       +++.|.++++++|+++||+|||+|+|+|++||||||||||+|+|.+|+|+||||.+|||||+.....+.        .+
T Consensus       525 -yrk~~~~s~~srd~~~TL~RyYsNaf~D~dkQdaINLFLG~f~P~~g~p~LWel~sD~~lH~~~~l~~~~~~~v~~~~~  603 (868)
T KOG1888|consen  525 -YRKTAQWSTQSRDFLQTLSRYYSNAFVDADKQDAINLFLGVFRPSEGKPALWELRSDYYLHVAGSLREISPSEVDDWVG  603 (868)
T ss_pred             -hhhhhhhhhHHHHHHHHHHHHHhhccccHHHHHHHHHHhccccccCCCCccccccccHHHhccccccCCCcchhhhccC
Confidence             888888899999999999999999999999999999999999999999999999999999999887664        24


Q ss_pred             cccccccccccCCCcccccCCCCccccccccccchhhhhhhccccccccccccCCCCCCCCCCCCcccCCcHHHHhhcC-
Q 002393          673 EKCLEGSAKAVGIGRKLAPIPACREDFSRMKLTSFDKLIERTCSSIKNVRLCSEPDQRPGGVAGNSGVAPDAAEIQLKS-  751 (928)
Q Consensus       673 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  751 (928)
                      .+.++.++|+..||++|.|.++..++|.+.....+.+.+...|.++...-.+...+..|++.++++.++|+++..|.++ 
T Consensus       604 ~~~~~~i~~~~~d~~ll~~~~~~~~~~d~~~e~~~~~~~s~~~~~~~~~i~~~~~~~~p~~~~~f~~~~~~~~~sr~~~~  683 (868)
T KOG1888|consen  604 LDIDELIKRCLNDGNLLKPSHGPLSAFDRYNEYLSPKDFSSFSDLIAFEILSSARDDMPTTATTFYAVAPDPFTSRKKSL  683 (868)
T ss_pred             CCHHHHHhhhcCCCceeeecCCChHHhhhhccccCccccccHHHHHHHHHhccccccCcccccccccccCChhhhhcccc
Confidence            4557889999999999988888555544433333333333334444432222345667777888899999999999998 


Q ss_pred             --CCcccccccccCCCccccccccccccccccc---ccCCCccCCccccccCCCCChhhhhhh--hhcccccccCCcccc
Q 002393          752 --PNWLFGQRKLEGSGAAAKVTTNETANREVHR---ETRGDNFCDLNWLSSADDINDEDIFQR--YSAMTYADEANGWYG  824 (928)
Q Consensus       752 --p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~wls~~~~~~~e~~~~r--~~~~~~~~~~~~~~~  824 (928)
                        +.|+||++..+......     ..+.++.++   +..+++|.|++|+|+..+.||+++++|  +.-+++..+.++||+
T Consensus       684 ~~sk~~~~~~~~~~~~~~~-----~~~~d~d~~~sseE~v~~f~~~e~~s~~s~~~e~~~~~r~sp~~~~~~~~~s~~~~  758 (868)
T KOG1888|consen  684 GISKGLFGSKSTEKRNGSD-----KEYADEDEDSSSEEDVSSFADLEWLSTPSTELEGDLLQRSSPLPITSTAETSSGGN  758 (868)
T ss_pred             cCCcccccccccccccccc-----cccccCCCCCCchhhhhhhhhhhhhcCCCccchhchhccCCCCcccchhhhhcccC
Confidence              56999977666544333     333444444   333889999999999899999999999  567788889999999


Q ss_pred             ccccCCCCcchHH---HHHHHHhccCCCCCCCCCChhhhhHHhhhhccccccccchHHHHHHHHHHHHHHHHhcccCccc
Q 002393          825 GTLLGDQDENSEI---YKHYAELCQGPAMEPFEHDHEREKYYADVLRMNTIDVVDDHAVEAEMAAALSEYEQIGANLGII  901 (928)
Q Consensus       825 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  901 (928)
                      |  |+..+|+.++   +.++.+.||+|+|++|+.++.+.+..+.++.+.++|++|-..+.+.+++...+++..|.+++..
T Consensus       759 ~--l~~~~e~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~pv~~~~~~~~~~l~~~~~~~~d~~~ev~~~~~~l~s~  836 (868)
T KOG1888|consen  759 G--LPPSKENYGIYRGLVEEGQLPQNPAIKDFESNHERDKNVAPVLTNCSSDVMDLTKISEFFEDSFLEVEPPGVALKSA  836 (868)
T ss_pred             C--CCchHhhhhcccccccccccccCCCCCcccccchhhhccchhhhcCccccccccchhhhchhhheeecccccCcchh
Confidence            9  9999999999   6889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccCCcccccceecCCcccc
Q 002393          902 PTSCKSFAEDPSQLSRWMIGEEKLQ  926 (928)
Q Consensus       902 ~~~~~~~~~~~~~~~~~~~~~~~~~  926 (928)
                      ++.|.++..||+|+++|..+|+++.
T Consensus       837 ~~a~~hi~~d~~~~~~~~~~d~~~~  861 (868)
T KOG1888|consen  837 EIACLHIKSDPATLAPNSSEDEDVI  861 (868)
T ss_pred             HHHHheecCCcccccCccccchhHH
Confidence            9999999999999999999999875


No 2  
>KOG1889 consensus Putative phosphoinositide phosphatase [Lipid transport and metabolism]
Probab=100.00  E-value=1e-118  Score=1001.09  Aligned_cols=496  Identities=33%  Similarity=0.570  Sum_probs=436.8

Q ss_pred             eeeEEEEEeCCEEEEEecCCCCcceEEEEEeCCCCCCCccccCCcccCHHHHHHHHHhhhcCCccCCCccceeEEEEEEE
Q 002393           52 LEKFKLYETRARFYLIGSDRNKRFFRVLKIDRSEPSDLNISEDPVVYSPQEIKNLLQRISEGNRATGGLTFVAKVFGIAG  131 (928)
Q Consensus        52 ~~~f~LyeT~~rfyiv~s~~~~~~~rvLkIDR~~~~~L~i~Ed~~~ys~~e~~~lL~~i~egn~~~ggl~~v~~~yGIlG  131 (928)
                      ++.++||++|+.|+|++.|++..  .+|.|||.++. ..+.....     +      .    .   .+. .+..+||++|
T Consensus         2 ~~~l~l~~~pe~~~~e~~dg~gd--~~l~i~r~~~~-~~~i~~~~-----~------~----v---~~~-~~~~i~gv~G   59 (579)
T KOG1889|consen    2 YENLKLYENPEQFVIEPADGGGD--SCLTIDRVDGV-MKVIDAVK-----K------P----V---PSS-VIRSIFGVLG   59 (579)
T ss_pred             CcceEEEEccceEEEEecCCCCc--eEEEEeccCCc-eEeecccc-----c------c----C---ccc-ceeeeeeeee
Confidence            56799999999999999987765  59999999863 22221110     0      0    0   001 3568999999


Q ss_pred             EEEEcCceEEEEEeceeEeeeecCceEEEEeeeeeEecCCCCcCcccccchhHHHHHHHhhccCCCCceEEecccCccch
Q 002393          132 CIKFLESYYLILVTKRRQIGCICGHAIYSIDESQLITIPHVSIQSDVAHSKTELRYKKLLSSVDLTKDFYYSYTYPIMQS  211 (928)
Q Consensus       132 ~Ir~l~~~YLlVIT~r~~VG~I~Gh~IY~I~~t~~Ipi~~~~~~~~~~~skdE~ry~kLL~~vdlt~~FYFSytYDLT~S  211 (928)
                      +|++..+.||+|||++..+|.+.||.||+|.+.++||+.+.  .....+.+.|..|.+||+.+.-+++||||||||||+|
T Consensus        60 ~ikL~~~~ylivvt~~~~vg~~~gh~i~~v~~~~iIp~k~~--~~~~~q~k~~~~~~~lL~~~lkt~~fyfSyt~dlT~s  137 (579)
T KOG1889|consen   60 MIKLLAGSYLIVVTEAESVGQFNGHVIYRITDFEIIPYKKT--NLTEEQIKMETEFSNLLSHVLKTGGFYFSYTYDLTNS  137 (579)
T ss_pred             EEEEecCcEEEEEEehhhhccccCcceEEEeeeeEEEeecC--CchHHHHHHHHHHHHHHHHHHhcCceEEEEEEccchH
Confidence            99999999999999999999999999999999999999886  2333455667789999999999999999999999999


Q ss_pred             hhhhhhcc--c---cCCCCcccccccchhccHHHHhccCCCceEEEeeeeEEEeEEEEEeeceeEEEEEEeecccccccc
Q 002393          212 LQKNVLSM--A---EEGMPYENIFVWNAYLTQPIRLRCKNTIWTIALVHGHFKQIRLSIFGRDFSVSLISRRSRHFAGTR  286 (928)
Q Consensus       212 lQ~n~~~~--~---~~~~~yd~rFvWN~~Ll~~~r~~l~~~~w~vpLIqGfv~q~~~~i~g~~~~ltLISRRS~~rAGTR  286 (928)
                      +|+.....  .   ..|...|.||+||.+|++.|+.+.....|++|+||||+++..+.++|+.+.++||||||+.|||||
T Consensus       138 lqrl~~~~~~~~~~~l~~~ad~rFlwN~~ll~~~~~~~~~~~f~lpvi~Gf~~~~~~~i~~~tv~l~lIsRRs~~RaGtR  217 (579)
T KOG1889|consen  138 LQRLHENADEGKALSLWRRADKRFLWNGYLLEDLIDNAKVDLFILPVIQGFIGSVDVGINGKTVDLTLISRRSIRRAGTR  217 (579)
T ss_pred             HHhhhhccccccccchhhhcccceeecchhHHHHhcCccccchhhHHhhhhhheeeEeeccceEEEEEeehhhhhcccee
Confidence            99943221  1   125567999999999999999876678999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCcceeeeeeEEEEccccCCCCCcEEEEEEEecCcceeeEecCCCCCCccceEecCCCccHHHHHHHHHHH
Q 002393          287 YLKRGVNDRGRVANDVETEQVVLDEEAGSCKGKMSSVVQMRGSIPLFWSQEASRFSPKPDIILQRYDPTYQATKMHFEDL  366 (928)
Q Consensus       287 Y~~RGIDddG~VANfVETEQIV~~~~~~~~~~~isSfVQiRGSIPLfWsQ~~~~l~~KP~I~l~~~d~~~~A~~kHF~~L  366 (928)
                      |++||+|.+|+|||||||||||..+      +..+||||+|||||+||+|.+ ++.+||.+.+.+.+....|+.+||++|
T Consensus       218 yfrRG~D~~G~vaNfvETEQIv~~~------~~~~SFvQ~RGSiP~~W~qv~-nL~YkP~~~l~~~~~~~~~~~rhF~~~  290 (579)
T KOG1889|consen  218 YFRRGSDEDGYVANFVETEQIVEYN------GHTTSFVQTRGSIPFFWEQVP-NLRYKPKPVLVPPENALAAFGRHFDEL  290 (579)
T ss_pred             EEecccCCcccccccceeeEEEEec------CcEEEEEEeccCccchHHhcC-CCccCCceeecChHHHHHHHHHHHHHH
Confidence            9999999999999999999999986      479999999999999999975 788899889988888999999999999


Q ss_pred             HHhhCCcEEEEecccCccCCchhhHHHHHHHHHHHHhhhcCCcCCCeEEEecccchhhhcccchHHHHHHHHHHHHhccc
Q 002393          367 AKRYGNPIIVLNLIKTVEKRPREMMLRREFANAVGYLNTILSEENQVRFIHWDFHKFAKSKSANVLAVLGGVASEALDLT  446 (928)
Q Consensus       367 ~~rYG~pIiiVNLLk~~Ekk~~E~~L~~~F~~aV~~ln~~lp~e~~I~Yi~FDfHk~~K~k~~nvl~~L~~va~~~l~~~  446 (928)
                      .+.||+ +++|||+++   |++|++|.++|++.++.+|.     ..|+|+||||||+|+.+.++.+++|-...+..++..
T Consensus       291 ~~~YG~-~v~VNLvnq---KG~E~~l~~~ye~~~~~~~~-----~~irYv~FDFHkec~~m~wdrl~lll~~ie~~~~~~  361 (579)
T KOG1889|consen  291 RKKYGD-VVAVNLVNQ---KGREGPLKEGYEKVVRRLNN-----PPIRYVHFDFHKECGHMRWDRLSLLLEQIEQELEEF  361 (579)
T ss_pred             HHHhCC-EEEEEeecc---cCcccchhhHHHHHHHhcCC-----CCceEEEeehhhhccccchhhHHHHHHHHHHHHHhc
Confidence            999997 789999996   67899999999999999985     369999999999999999998887766656678889


Q ss_pred             cceeeCCCcccccccchhhhcccccCCccccccCCCCCCCCCCcccccccccccCCCCCCCCCcceeceEEeeccCccch
Q 002393          447 GFYYSGKSCITKKRTSQLRDLRASSGDLARVGSCNESLNSVGSRERDADFYQQSKTNSPDGAAPCFQSGVLRTNCIDCLD  526 (928)
Q Consensus       447 gff~~~~~~~~~~~~~~l~~~r~~s~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~Q~GV~RTNCiDCLD  526 (928)
                      |||+-..                                                    .++....|.||||||||||||
T Consensus       362 gy~~~~~----------------------------------------------------~g~~~~~Q~gvvRTNCmDCLD  389 (579)
T KOG1889|consen  362 GYFLLDS----------------------------------------------------NGKTVLEQTGVVRTNCMDCLD  389 (579)
T ss_pred             CEEEEec----------------------------------------------------CCceeeeecCeeeccchhhcc
Confidence            9987531                                                    023455899999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHcCCCCCC-CCCCCchHHHHHHHHHHHHhhHHHHHhcCCccccccccccccccccccccCc
Q 002393          527 RTNVAQYAYGLAALGRQLHAMGLTDMP-KVNPNSSIAAALMDMYQSMGDALAQQYGGSAAHNTLRRVSYECQVFPERQGK  605 (928)
Q Consensus       527 RTNV~Q~~ig~~aL~~QL~~LGi~~~~-~i~~ds~~~~~l~~lwadnGD~IS~QYaGT~Alktl~~~~~~~~~F~~R~Gk  605 (928)
                      ||||+|+++|+.+|+.||+.+|++... +++...++...|+.+|+||||.||+||+||+|||+         ||+ |+|+
T Consensus       390 RTNVvQs~lar~~L~~qL~~~gVl~~~~~le~~~~f~~~fk~iWAdngD~iS~qYSGT~ALKt---------DFt-R~G~  459 (579)
T KOG1889|consen  390 RTNVVQSMLARWSLQKQLRKLGVLHAGQKLEEADPFESIFKNLWADNGDYISIQYSGTGALKT---------DFT-RTGK  459 (579)
T ss_pred             chhHHHHHHHHHHHHHHHHhcCeeccccchhhcccHHHHHHHhhhcccchhhhhccCCccccc---------cee-eccc
Confidence            999999999999999999999998754 46667889999999999999999999999999999         996 9999


Q ss_pred             cccccchhHHHHHHHHHhhcccCchhhhhHHHhhhccccCCCCC
Q 002393          606 WKATTQSREFLKSIKRYYSNAYTDGEKQDAINLFLGYFQPQEGK  649 (928)
Q Consensus       606 ~~~~~~s~D~~~Sl~RYY~NnF~D~~KQdaInLfLG~~~p~~g~  649 (928)
                      ++..|+++|++||++|||.|||.||.||||||||||+|.|....
T Consensus       460 RT~~Ga~~Dg~Ns~~RYylNNf~DG~rQDsiDL~lG~f~v~~s~  503 (579)
T KOG1889|consen  460 RTIVGALKDGWNSFRRYYLNNFADGTRQDSIDLFLGNFRVDVSR  503 (579)
T ss_pred             eeehhhhHhHHHHHHHHHHhcccCccccchHHHhcCCccccccc
Confidence            99999999999999999999999999999999999999998644


No 3  
>COG5329 Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
Probab=100.00  E-value=2.6e-105  Score=907.14  Aligned_cols=500  Identities=32%  Similarity=0.504  Sum_probs=404.0

Q ss_pred             eEEEEEeCCEEEEEecCCCCcceEEEEEeCCCCCCCccccCCcccCHHHHHHHHHhhhcCCccCCCccceeEEEEEEEEE
Q 002393           54 KFKLYETRARFYLIGSDRNKRFFRVLKIDRSEPSDLNISEDPVVYSPQEIKNLLQRISEGNRATGGLTFVAKVFGIAGCI  133 (928)
Q Consensus        54 ~f~LyeT~~rfyiv~s~~~~~~~rvLkIDR~~~~~L~i~Ed~~~ys~~e~~~lL~~i~egn~~~ggl~~v~~~yGIlG~I  133 (928)
                      +..|+|.+ |-+++.++.....+|-+   -...+++.+...+.++...+..+-+..          +.-..+++|++|+|
T Consensus         2 ~~~l~~~~-r~i~~~sn~~~~~fr~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~i~g~~Gli   67 (570)
T COG5329           2 QCFLGEKP-RSIAIVSNNYALSFRRL---GVKNSERILCATELVGVRFEPDEGFSS----------LSSAHKIYGVIGLI   67 (570)
T ss_pred             eeeeccCc-eeEEEEeccceEEEEec---CCCccceEEEeeccceeecccCccchh----------hccceeEEeEEEEE
Confidence            35689999 77777777655544433   222223444433333332222111111          12235799999999


Q ss_pred             EEcCceEEEEEeceeEeeeecCceEEEEeeeeeEecCCCCcCcccccchhHHHHHH--HhhccCCCCceEEecccCccch
Q 002393          134 KFLESYYLILVTKRRQIGCICGHAIYSIDESQLITIPHVSIQSDVAHSKTELRYKK--LLSSVDLTKDFYYSYTYPIMQS  211 (928)
Q Consensus       134 r~l~~~YLlVIT~r~~VG~I~Gh~IY~I~~t~~Ipi~~~~~~~~~~~skdE~ry~k--LL~~vdlt~~FYFSytYDLT~S  211 (928)
                      .+.+..||+|||++..||.+.||.||+|.+++||++.++.....  ...+|+.+.+  -|+.++.++.|||||+||||++
T Consensus        68 ~l~~~~yl~~it~~s~v~~~~g~~IykI~~vdfi~l~~~~~d~~--~~~~~~~~~~~~~lk~Lls~gtFYfS~~~diTn~  145 (570)
T COG5329          68 KLKGDIYLIVITGASLVGVIPGHSIYKILDVDFISLNNNKWDDE--LEEDEANYDKLSELKKLLSNGTFYFSYDFDITNS  145 (570)
T ss_pred             EecCcEEEEEEecceEEeeeCCcceEEEeeeEEEEccccccchh--hhhhhhhhhhhhhhhhhhcCCcEEEecccchhhh
Confidence            99999999999999999999999999999999999998754322  1236677777  4444667899999999999999


Q ss_pred             hhhhhhcc-ccCCCCcccccccchhccHHHHhccC--------CCceEEEeeeeEEEeEEEEEeeceeEEEEEEeecccc
Q 002393          212 LQKNVLSM-AEEGMPYENIFVWNAYLTQPIRLRCK--------NTIWTIALVHGHFKQIRLSIFGRDFSVSLISRRSRHF  282 (928)
Q Consensus       212 lQ~n~~~~-~~~~~~yd~rFvWN~~Ll~~~r~~l~--------~~~w~vpLIqGfv~q~~~~i~g~~~~ltLISRRS~~r  282 (928)
                      ||++.... ...++.+|.+|+||++|++.++++..        ...|++++|+||+++..+.+++..+.++||||||++|
T Consensus       146 lQ~~~~~~~~~~~~~~d~~f~wN~fl~~e~i~~r~~~~~~~k~~~~flt~vIrGf~~t~~~~~~~~~i~ltLISR~S~~r  225 (570)
T COG5329         146 LQKNLSEGLEASVDRADLIFMWNSFLLEEFINHRSKLSSLEKQFDNFLTTVIRGFAETVDIKVGGNTISLTLISRRSSER  225 (570)
T ss_pred             hhhccccCccccccchhheeecchhhHHHHHhhcccCChhhhcccchheeeeeeeeeeEEEeecCceEEEEEEEeehhhc
Confidence            99983221 12344568999999999999876421        1239999999999999999999999999999999999


Q ss_pred             cccccccccCCCCCCcceeeeeeEEEEccccCCCCCcEEEEEEEecCcceeeEecCCCCCCccceEecCC-CccHHHHHH
Q 002393          283 AGTRYLKRGVNDRGRVANDVETEQVVLDEEAGSCKGKMSSVVQMRGSIPLFWSQEASRFSPKPDIILQRY-DPTYQATKM  361 (928)
Q Consensus       283 AGTRY~~RGIDddG~VANfVETEQIV~~~~~~~~~~~isSfVQiRGSIPLfWsQ~~~~l~~KP~I~l~~~-d~~~~A~~k  361 (928)
                      |||||++||||++|||||||||||||...      ..++||||+|||||+||+| . .....|+|.+.+. +....||.+
T Consensus       226 aGtRy~~RGiDddGnvsnFVETE~Iv~~~------~~~fSf~QvRGSIPifWeq-~-~~l~~pkI~i~~s~~a~~~af~k  297 (570)
T COG5329         226 AGTRYLSRGIDDDGNVSNFVETEQIVTDS------QYIFSFTQVRGSIPLFWEQ-S-NLLYGPKIKVTRSSEAAQSAFDK  297 (570)
T ss_pred             ccceeeccccCCCCcccceeeeEEEEEec------ceEEEEEEecCceeeEEhh-h-ccccCCCeEEeccchhhHHHHHH
Confidence            99999999999999999999999999987      4799999999999999999 3 3345566777654 458999999


Q ss_pred             HHHHHHHhhCCcEEEEecccCccCCchhhHHHHHHHHHHHHhhhcCCcCCCeEEEecccchhhhcccchHHHHHHHHHHH
Q 002393          362 HFEDLAKRYGNPIIVLNLIKTVEKRPREMMLRREFANAVGYLNTILSEENQVRFIHWDFHKFAKSKSANVLAVLGGVASE  441 (928)
Q Consensus       362 HF~~L~~rYG~pIiiVNLLk~~Ekk~~E~~L~~~F~~aV~~ln~~lp~e~~I~Yi~FDfHk~~K~k~~nvl~~L~~va~~  441 (928)
                      ||++|.++||. |.|||||++   |++|..|.++|++++...|.     .++.|++||||++|+..+++....|......
T Consensus       298 HF~~L~~~YG~-v~vvNLl~t---K~~E~~L~~~ye~~l~~~~~-----~~i~~~~fdfh~e~~~~~~~~~~~Ll~~i~~  368 (570)
T COG5329         298 HFDKLREKYGD-VYVVNLLKT---KGYEAPLLELYEKHLDLSKK-----PKIHYTEFDFHKETSQDGFDDVKKLLYLIEQ  368 (570)
T ss_pred             HHHHHHHHcCC-EEEEEcccC---CcchhHHHHHHHHHHhhCCC-----CCceeEEEeehhcccccccccHHHHHHHHHH
Confidence            99999999996 999999997   56899999999999984432     3689999999999998777766666555555


Q ss_pred             HhccccceeeCCCcccccccchhhhcccccCCccccccCCCCCCCCCCcccccccccccCCCCCCCCCcceeceEEeecc
Q 002393          442 ALDLTGFYYSGKSCITKKRTSQLRDLRASSGDLARVGSCNESLNSVGSRERDADFYQQSKTNSPDGAAPCFQSGVLRTNC  521 (928)
Q Consensus       442 ~l~~~gff~~~~~~~~~~~~~~l~~~r~~s~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~Q~GV~RTNC  521 (928)
                      .+...|||.....                                                   .+....+|+|||||||
T Consensus       369 ~l~~~gy~~~d~~---------------------------------------------------~~~~~s~Q~GV~RtNC  397 (570)
T COG5329         369 DLLEFGYFAYDIN---------------------------------------------------EGKSISEQDGVFRTNC  397 (570)
T ss_pred             HHHhcCceecccc---------------------------------------------------CCceeeeecceEEecc
Confidence            6888898854211                                                   1456889999999999


Q ss_pred             CccchhhhHHHHHHHHHHHHHHHHHcCCCCCCCCCCCchHHHHHHHHHHHHhhHHHHHhcCCcccccccccccccccccc
Q 002393          522 IDCLDRTNVAQYAYGLAALGRQLHAMGLTDMPKVNPNSSIAAALMDMYQSMGDALAQQYGGSAAHNTLRRVSYECQVFPE  601 (928)
Q Consensus       522 iDCLDRTNV~Q~~ig~~aL~~QL~~LGi~~~~~i~~ds~~~~~l~~lwadnGD~IS~QYaGT~Alktl~~~~~~~~~F~~  601 (928)
                      +||||||||+|+.|| .+|.+|++..+.+..    .++|+.+.+.++|+||||+||++|+||+|+|+         +|+ 
T Consensus       398 lDCLDRTNviQ~~Is-r~~le~~~~~~~i~~----~~~~fl~~~~~LWaDNgd~is~~YTGt~alks---------~fT-  462 (570)
T COG5329         398 LDCLDRTNVIQSLIS-RVLLEQFRSEGVISD----GYSPFLQIHRELWADNGDAISRLYTGTGALKS---------SFT-  462 (570)
T ss_pred             hhhcccchHHHHHHH-HHHHHHHHhhhhhcc----cccHHHHHHHHHHhhchhHHHHHhcCCccccc---------hhh-
Confidence            999999999999999 556667777776543    23389999999999999999999999999999         996 


Q ss_pred             ccCccccccchhHHHHHHHHHhhcccCchhhhhHHHhhhccccCCCCCCcc
Q 002393          602 RQGKWKATTQSREFLKSIKRYYSNAYTDGEKQDAINLFLGYFQPQEGKPAL  652 (928)
Q Consensus       602 R~Gk~~~~~~s~D~~~Sl~RYY~NnF~D~~KQdaInLfLG~~~p~~g~p~l  652 (928)
                      |+|+++.+|+++|+.+|++|||+|||.|+.||++||||||.+.|++.-+-.
T Consensus       463 r~g~~s~~gal~D~~~S~~R~y~nnf~D~~rQ~~idllLg~~~~~~~~~~~  513 (570)
T COG5329         463 RRGRRSFAGALNDFIKSFSRYYINNFTDGQRQDAIDLLLGKFRPQEAFSYR  513 (570)
T ss_pred             hhcchhhhhhhhhhhhhhHHhhcccccchhhhhHHHHHhccCCCccccccc
Confidence            999999999999999999999999999999999999999999999765443


No 4  
>KOG1890 consensus Phosphoinositide phosphatase SAC1 [Lipid transport and metabolism]
Probab=100.00  E-value=2.3e-98  Score=834.76  Aligned_cols=486  Identities=30%  Similarity=0.521  Sum_probs=398.4

Q ss_pred             EEEEEeCCEEEEEecCCCCcceEEEEEeCCCCCCCccccCCcccCHHHHHHHHHhhhcCCccCCCccceeEEEEEEEEEE
Q 002393           55 FKLYETRARFYLIGSDRNKRFFRVLKIDRSEPSDLNISEDPVVYSPQEIKNLLQRISEGNRATGGLTFVAKVFGIAGCIK  134 (928)
Q Consensus        55 f~LyeT~~rfyiv~s~~~~~~~rvLkIDR~~~~~L~i~Ed~~~ys~~e~~~lL~~i~egn~~~ggl~~v~~~yGIlG~Ir  134 (928)
                      +.||.|+++|+++-.+      |.|-.||.++. +.+  .|.     +-..++.     +     +.-.-.+.|++|.|.
T Consensus         1 Meifqt~~hyIl~qge------rslw~~RR~g~-~~~--kp~-----~dL~~~d-----d-----~~c~G~veg~iGkIs   56 (949)
T KOG1890|consen    1 MEIFQTPTHYILEQGE------RSLWFDRRNGK-VLE--KPE-----EDLEILD-----D-----VVCCGNVEGLIGKIS   56 (949)
T ss_pred             CceeecCceeeeeccc------eeeEEeccCCc-eee--ccc-----cchhhcc-----C-----ceEecceeeeEEEEe
Confidence            4689999999999422      46888999863 322  221     0001111     0     111224689999999


Q ss_pred             EcCce--EEEEEeceeEeeeecC-ceEEEEeeeeeEecCCCCcC-------------------cc---------------
Q 002393          135 FLESY--YLILVTKRRQIGCICG-HAIYSIDESQLITIPHVSIQ-------------------SD---------------  177 (928)
Q Consensus       135 ~l~~~--YLlVIT~r~~VG~I~G-h~IY~I~~t~~Ipi~~~~~~-------------------~~---------------  177 (928)
                      |.+.+  +|++|.++..||.+.| |.||+|+++-.+.+..+...                   +.               
T Consensus        57 l~~~~~~~L~~v~~~s~Vg~l~g~H~v~ki~~i~~ls~~~pd~dl~~ckkhh~~~n~~~~i~Pss~~sKfl~kt~~~iks  136 (949)
T KOG1890|consen   57 LDEQHEPFLFFVVDSSVVGCLRGSHSVRKIERIIALSVKSPDTDLSVCKKHHSVSNNNNAITPSSGGSKFLKKTTEKIKS  136 (949)
T ss_pred             ccccCCceEEEEEeeeeEEEecCCceeeeEEEEEEEecCCCCccchhhhhhccccCCCCcccCCCCcchHHHHHHHHHHh
Confidence            99877  9999999999999965 99999999988877543110                   00               


Q ss_pred             -c--------ccc----hhHHH-HHHHhhccCCCCceEEecccCccchhhhhhhccccCCCCcccccccchhccHHHHhc
Q 002393          178 -V--------AHS----KTELR-YKKLLSSVDLTKDFYYSYTYPIMQSLQKNVLSMAEEGMPYENIFVWNAYLTQPIRLR  243 (928)
Q Consensus       178 -~--------~~s----kdE~r-y~kLL~~vdlt~~FYFSytYDLT~SlQ~n~~~~~~~~~~yd~rFvWN~~Ll~~~r~~  243 (928)
                       .        ..+    +-|.| ...+|+.++-+++||||.+||+|+++|+.-....+++...|++|+||++|.+.+.+.
T Consensus       137 n~~a~n~kkVk~srEpr~ierrlleellK~F~ds~sFYfs~~~DvTns~Qr~~~~~re~~s~~ddrFFWNK~Mi~dL~e~  216 (949)
T KOG1890|consen  137 NFAAANTKKVKKSREPRHIERRLLEELLKLFNDSKSFYFSRSRDVTNSSQRYEFEKREAHSTSDDRFFWNKRMIGDLGEA  216 (949)
T ss_pred             hccccchhhhhcccCcchhhHHHHHHHHHHhccccceEEEeecccccHHhhhhhhhcccccCccchhhhHHHHHhhHhhc
Confidence             0        001    11323 345666667799999999999999999986666666667799999999999998874


Q ss_pred             c-CCCceEEEeeeeEEEeEEEEEeec---eeEEEEEEeecccccccccccccCCCCCCcceeeeeeEEEEccccCCCCCc
Q 002393          244 C-KNTIWTIALVHGHFKQIRLSIFGR---DFSVSLISRRSRHFAGTRYLKRGVNDRGRVANDVETEQVVLDEEAGSCKGK  319 (928)
Q Consensus       244 l-~~~~w~vpLIqGfv~q~~~~i~g~---~~~ltLISRRS~~rAGTRY~~RGIDddG~VANfVETEQIV~~~~~~~~~~~  319 (928)
                      - ....|++|+||||+....+.|+..   -|.++|||||||||||+||.+||||+.||||||||||||+....      +
T Consensus       217 ~~~D~~wi~PiiQGfvq~e~lvi~de~~c~ftialiSRRSrhRAG~RYkRRGvDe~gNvANyVETEqil~~~~------H  290 (949)
T KOG1890|consen  217 KISDKKWICPIIQGFVQTEQLVITDEINCYFTIALISRRSRHRAGARYKRRGVDEAGNVANYVETEQILNIFE------H  290 (949)
T ss_pred             CCCCccEeehhhhhhhhhheEEeccccceEEEEEeeechhhhhccchhhhcCcccccchhhhhhHHHHHHhhh------c
Confidence            2 235899999999999999988765   38999999999999999999999999999999999999997753      5


Q ss_pred             EEEEEEEecCcceeeEecCCCCCCccceEecCCCccHHHHHHHHHHHHHhhCCcEEEEecccCccCCchhhHHHHHHHHH
Q 002393          320 MSSVVQMRGSIPLFWSQEASRFSPKPDIILQRYDPTYQATKMHFEDLAKRYGNPIIVLNLIKTVEKRPREMMLRREFANA  399 (928)
Q Consensus       320 isSfVQiRGSIPLfWsQ~~~~l~~KP~I~l~~~d~~~~A~~kHF~~L~~rYG~pIiiVNLLk~~Ekk~~E~~L~~~F~~a  399 (928)
                      -.||||+|||||+||+|.+.+++|.|.+..+ ..++..+|..||.+++..||. ++||||+++   +++|..++++|.++
T Consensus       291 ~LSFvQ~RGSvPvfWSQ~GykYrPpprldRs-v~ET~~~F~~HF~~~l~~Y~~-~vivnLVdQ---~GrEk~igdayl~h  365 (949)
T KOG1890|consen  291 ELSFVQCRGSVPVFWSQRGYKYRPPPRLDRS-VEETHGVFTEHFKRLLAHYDT-LVIVNLVDQ---RGREKPIGDAYLEH  365 (949)
T ss_pred             eeeEEEeecccceeecccCcccCCCccccch-HHHHHHHHHHHHHHHHHhhCc-EEEEEhhhh---cCcccchHHHHHHH
Confidence            7899999999999999998777666554332 467899999999999999998 788999997   56799999999999


Q ss_pred             HHHhhhcCCcCCCeEEEecccchhhhc-ccchHHHHHHHHHHHHhccccceeeCCCcccccccchhhhcccccCCccccc
Q 002393          400 VGYLNTILSEENQVRFIHWDFHKFAKS-KSANVLAVLGGVASEALDLTGFYYSGKSCITKKRTSQLRDLRASSGDLARVG  478 (928)
Q Consensus       400 V~~ln~~lp~e~~I~Yi~FDfHk~~K~-k~~nvl~~L~~va~~~l~~~gff~~~~~~~~~~~~~~l~~~r~~s~~~~~~~  478 (928)
                      |-.+|.     +++.|+.||||.+|++ +..|+..++..+.+. +...||.|-..                         
T Consensus       366 vvk~nn-----~~ltyvsFDfH~hCRGm~FenvqtLida~~~~-~~~mgfcWvD~-------------------------  414 (949)
T KOG1890|consen  366 VVKANN-----NDLTYVSFDFHQHCRGMNFENVQTLIDAMEET-LKTMGFCWVDK-------------------------  414 (949)
T ss_pred             HHcccC-----CceEEEEeehHHhhCccchhhHHHHHHHHHHH-HhhceeEEecc-------------------------
Confidence            988875     6899999999999998 667888887777554 44567755321                         


Q ss_pred             cCCCCCCCCCCcccccccccccCCCCCCCCCcceeceEEeeccCccchhhhHHHHHHHHHHHHHHHHHcCCCCCCCCCCC
Q 002393          479 SCNESLNSVGSRERDADFYQQSKTNSPDGAAPCFQSGVLRTNCIDCLDRTNVAQYAYGLAALGRQLHAMGLTDMPKVNPN  558 (928)
Q Consensus       479 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~Q~GV~RTNCiDCLDRTNV~Q~~ig~~aL~~QL~~LGi~~~~~i~~d  558 (928)
                                                  ..+++.|+||||+|||||||||||||-+||+.++++||++||+.. |.-++.
T Consensus       415 ----------------------------~Gvic~QkgvfRvNCmDCLDRTNvVQ~aI~~~V~eqQl~kLGi~p-P~~p~P  465 (949)
T KOG1890|consen  415 ----------------------------TGVICSQKGVFRVNCMDCLDRTNVVQGAISLFVVEQQLQKLGIFP-PLCPPP  465 (949)
T ss_pred             ----------------------------cceeecccceEEeehhhhhchhhHHHHHHHHHHHHHHHHHhCCCC-CCCCCh
Confidence                                        126889999999999999999999999999999999999999964 444555


Q ss_pred             chHHHHHHHHHHHHhhHHHHHhcCCccccccccccccccccccccCccccccchhHHHHHHHHHhhcccCchhhhhHHHh
Q 002393          559 SSIAAALMDMYQSMGDALAQQYGGSAAHNTLRRVSYECQVFPERQGKWKATTQSREFLKSIKRYYSNAYTDGEKQDAINL  638 (928)
Q Consensus       559 s~~~~~l~~lwadnGD~IS~QYaGT~Alktl~~~~~~~~~F~~R~Gk~~~~~~s~D~~~Sl~RYY~NnF~D~~KQdaInL  638 (928)
                      ..+.+.++.|||+|||.||+|||||+|||+         ||+ |+|.++++|.++|++||..|||.+.|.|++||.+|||
T Consensus       466 e~l~~~~q~mWAnNGD~ISrQYAGTaALKG---------D~T-RtGERKl~GvMKDG~NSAnRYYL~rfKDayRQa~Idl  535 (949)
T KOG1890|consen  466 EVLVQTMQTMWANNGDVISRQYAGTAALKG---------DVT-RTGERKLMGVMKDGYNSANRYYLTRFKDAYRQAAIDL  535 (949)
T ss_pred             HHHHHHHHHHhhcCCceeehhhcchhhhcC---------ccc-ccchHHHhhhhhccccchhHHHHHhhhHHHHHHHHHH
Confidence            668889999999999999999999999999         995 9999999999999999999999999999999999999


Q ss_pred             hhccccC
Q 002393          639 FLGYFQP  645 (928)
Q Consensus       639 fLG~~~p  645 (928)
                      .+|.-..
T Consensus       536 m~G~~v~  542 (949)
T KOG1890|consen  536 MTGQTVA  542 (949)
T ss_pred             hcCCchh
Confidence            9998544


No 5  
>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00  E-value=8.3e-90  Score=799.60  Aligned_cols=450  Identities=27%  Similarity=0.428  Sum_probs=365.1

Q ss_pred             eeEEEEEEEEEEEcCceEEEEEeceeE---------eeeecCceEEEEeee--eeEecCCCCcCcccccc-hhHHHHHHH
Q 002393          123 VAKVFGIAGCIKFLESYYLILVTKRRQ---------IGCICGHAIYSIDES--QLITIPHVSIQSDVAHS-KTELRYKKL  190 (928)
Q Consensus       123 v~~~yGIlG~Ir~l~~~YLlVIT~r~~---------VG~I~Gh~IY~I~~t--~~Ipi~~~~~~~~~~~s-kdE~ry~kL  190 (928)
                      ...+||+||++++.++.|+.||++...         ||.|.+..||+|+.+  +||++............ ..-...+||
T Consensus        57 ~~~~yG~LGll~l~~~~~~~vi~g~~~l~~V~~~~sv~ki~~vdf~~l~~~~~dFi~l~~~~~~~~~~~~~~~~s~LrkL  136 (1080)
T KOG0566|consen   57 SHDIYGILGLLRLNGGDFVAVISGVSFLAQVTGSESVGKIEDVDFYSLTNTVWDFISLERSSSPEDTLYPKHPCSELRKL  136 (1080)
T ss_pred             ceeeeeeeEEEEEcCCceEEEeccceEEEEecCCceeccccceeEEEeccchhhheecccCCCCccccccccchHHHHHH
Confidence            568999999999999988766666555         455555666666666  66666554321111000 011236888


Q ss_pred             hhccCCCCceEEecccCccchhhhhhhccccCCCCcccccccchhccHHHHhc-------cCCCceEEEeeeeEEEeEEE
Q 002393          191 LSSVDLTKDFYYSYTYPIMQSLQKNVLSMAEEGMPYENIFVWNAYLTQPIRLR-------CKNTIWTIALVHGHFKQIRL  263 (928)
Q Consensus       191 L~~vdlt~~FYFSytYDLT~SlQ~n~~~~~~~~~~yd~rFvWN~~Ll~~~r~~-------l~~~~w~vpLIqGfv~q~~~  263 (928)
                      |+    ++.||||.+||||..+|++...    ...+|.+|+||++|..+++++       ++...|++.+|+|||+...+
T Consensus       137 Ls----sGsFYfS~~fDlt~~~q~rg~~----~d~~d~~f~WN~~L~~el~~~~s~~k~l~d~~~~Ll~~irG~ve~~~i  208 (1080)
T KOG0566|consen  137 LS----SGSFYFSSDFDLTCFAQNRGDQ----TDETDLRFFWNRFLHSELINYRSHLKQLLDCDGFLLTVIRGFVETRTI  208 (1080)
T ss_pred             hh----CCcEEEeeccchhhHHHhcCCC----cccccceeechhHHHHHHHHhhhhhhhccccccHHHHhhhceEEEEEE
Confidence            87    4999999999999999987421    223588999999999987653       45678999999999999999


Q ss_pred             EEeeceeEEEEEEeecccccccccccccCCCCCCcceeeeeeEEEEccccCCCCCcEEEEEEEecCcceeeEecCCCCCC
Q 002393          264 SIFGRDFSVSLISRRSRHFAGTRYLKRGVNDRGRVANDVETEQVVLDEEAGSCKGKMSSVVQMRGSIPLFWSQEASRFSP  343 (928)
Q Consensus       264 ~i~g~~~~ltLISRRS~~rAGTRY~~RGIDddG~VANfVETEQIV~~~~~~~~~~~isSfVQiRGSIPLfWsQ~~~~l~~  343 (928)
                      .++.+.+.++||||.||.||||||+.|||||+|||||||||||||..+      ..++|||||||||||||+|++..+ +
T Consensus       209 y~g~~~~~~~iISR~S~eragtrf~~rGidddG~VanFVETE~iv~~~------~~v~Sf~QIRGSvPlFWEQ~g~~~-~  281 (1080)
T KOG0566|consen  209 YVGANTARMTLISRLSCERAGTRFNVRGIDDDGNVANFVETEQIVYSD------QTVFSFTQIRGSVPLFWEQPGVQV-G  281 (1080)
T ss_pred             EeccceeeEEEEEeehhcccCceecccccCCccceeeeeeeEEEEEec------CcEEEEEEeccceeeeEeccCccc-c
Confidence            999999999999999999999999999999999999999999999976      469999999999999999986543 2


Q ss_pred             ccceEec-CCCccHHHHHHHHHHHHHhhCCcEEEEecccCccCCchhhHHHHHHHHHHHHhhhcCCcCCCeEEEecccch
Q 002393          344 KPDIILQ-RYDPTYQATKMHFEDLAKRYGNPIIVLNLIKTVEKRPREMMLRREFANAVGYLNTILSEENQVRFIHWDFHK  422 (928)
Q Consensus       344 KP~I~l~-~~d~~~~A~~kHF~~L~~rYG~pIiiVNLLk~~Ekk~~E~~L~~~F~~aV~~ln~~lp~e~~I~Yi~FDfHk  422 (928)
                      -|.|.+. ..+.+..||.+||..|.++||. |+|||||++   |+.|..|+++|++++....    ..+.|.++.||||+
T Consensus       282 s~kv~itR~~easq~aFdrHf~~L~~~YG~-v~IVNLLgt---k~gE~~Ls~~fk~hl~~s~----~~~dv~~t~fDyH~  353 (1080)
T KOG0566|consen  282 SHKVKITRSFEASQPAFDRHFSKLREKYGP-VYIVNLLGT---KEGEESLSEAFKRHLKLSP----IKPDVPLTNFDYHA  353 (1080)
T ss_pred             cceeEEeccchhhhHHHHHHHHHHHHhcCc-EEEEEcccC---cchHHHHHHHHHHHHhccC----CCCCcceeEEeecc
Confidence            3345553 3688999999999999999995 999999997   4579999999999987432    22468899999999


Q ss_pred             hhhcccc-hHHHHHHHHHHHHhccccceeeCCCcccccccchhhhcccccCCccccccCCCCCCCCCCcccccccccccC
Q 002393          423 FAKSKSA-NVLAVLGGVASEALDLTGFYYSGKSCITKKRTSQLRDLRASSGDLARVGSCNESLNSVGSRERDADFYQQSK  501 (928)
Q Consensus       423 ~~K~k~~-nvl~~L~~va~~~l~~~gff~~~~~~~~~~~~~~l~~~r~~s~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~  501 (928)
                      +++.... .+..++..+... +...|||+....                                               
T Consensus       354 ~~~~~~~~~~~kL~~~i~~~-~~~~G~f~~~~~-----------------------------------------------  385 (1080)
T KOG0566|consen  354 EVSGGKFEALHKLLYLILQD-ILEFGFFYYDIS-----------------------------------------------  385 (1080)
T ss_pred             ccccCCcchhHHHHHHHHhh-HHhcCeeeeccc-----------------------------------------------
Confidence            9998553 344455555544 566799876421                                               


Q ss_pred             CCCCCCCCcceeceEEeeccCccchhhhHHHHHHHHHHHHHHHHHcCCCCCCCCCCCchHHHHHHHHHHHHhhHHHHHhc
Q 002393          502 TNSPDGAAPCFQSGVLRTNCIDCLDRTNVAQYAYGLAALGRQLHAMGLTDMPKVNPNSSIAAALMDMYQSMGDALAQQYG  581 (928)
Q Consensus       502 ~~~~~~~~~~~Q~GV~RTNCiDCLDRTNV~Q~~ig~~aL~~QL~~LGi~~~~~i~~ds~~~~~l~~lwadnGD~IS~QYa  581 (928)
                           ...+++|+|||||||+|||||||++|+.||+.+|..||..+++...+.  ...+|.+.|..||++|||.||+.|+
T Consensus       386 -----~~~~~~Q~GVfRtNcLDCLDRTN~vQ~~Isl~~~~l~le~l~l~~~~~--~~~~f~e~~~~lWs~NGd~iskiYT  458 (1080)
T KOG0566|consen  386 -----EGLISEQDGVFRTNCLDCLDRTNVVQSLISLEVLRLQLEDLNLNEKQS--VVDRFLEIHRTLWSNNGDSLSKIYT  458 (1080)
T ss_pred             -----cCceeeecceEEecchhhcccchHHHHHHHHHHHHHHHHHhhcccccc--cchhHHHHHHHHHHhcchhhhhhhc
Confidence                 115789999999999999999999999999999999999999977655  4678999999999999999999999


Q ss_pred             CCccccccccccccccccccccCccccccchhHHHHHHHHHhhcccCchhhhhHHHhhhccccCCCCCCcccccCcceee
Q 002393          582 GSAAHNTLRRVSYECQVFPERQGKWKATTQSREFLKSIKRYYSNAYTDGEKQDAINLFLGYFQPQEGKPALWELDSDYYL  661 (928)
Q Consensus       582 GT~Alktl~~~~~~~~~F~~R~Gk~~~~~~s~D~~~Sl~RYY~NnF~D~~KQdaInLfLG~~~p~~g~p~lwel~sD~yl  661 (928)
                      ||+|+|+         .++ |       |.++|+.+|+.|.|+|||+|+.||+|||||||.+.+.+....|.+..+.|.+
T Consensus       459 GtgAlk~---------s~t-r-------G~L~D~skS~~R~y~nnf~D~~kQeaIdlLLg~l~~~q~~v~L~dpv~~yv~  521 (1080)
T KOG0566|consen  459 GTGALKS---------SAT-R-------GKLKDASKSVTRTYQNNFMDKEKQEAIDLLLGRLPSAQSAVILYDPVHEYVL  521 (1080)
T ss_pred             ccccccc---------ccc-c-------cchhhhhHHHHHHHhccccchhhHHHHHHHHhcCccccchhhhcCchhHHHH
Confidence            9999999         664 3       5568999999999999999999999999999988664566678888777776


Q ss_pred             eecCCC
Q 002393          662 HVSGIG  667 (928)
Q Consensus       662 h~~~~~  667 (928)
                      +..+..
T Consensus       522 ~~L~er  527 (1080)
T KOG0566|consen  522 KELRER  527 (1080)
T ss_pred             HHHHHh
Confidence            655443


No 6  
>PF02383 Syja_N:  SacI homology domain;  InterPro: IPR002013 Synaptic vesicles are recycled with remarkable speed and precision in nerve terminals. A major recycling pathway involves clathrin-mediated endocytosis at endocytic zones located around sites of release. Different 'accessory' proteins linked to this pathway have been shown to alter the shape and composition of lipid membranes, to modify membrane-coat protein interactions, and to influence actin polymerisation. These include the GTPase dynamin, the lysophosphatidic acid acyl transferase endophilin, and the phosphoinositide phosphatase synaptojanin [].  The recessive suppressor of secretory defect in yeast Golgi and yeast actin function belongs to this family. This protein may be involved in the coordination of the activities of the secretory pathway and the actin cytoskeleton. Human synaptojanin which may be localised on coated endocytic intermediates in nerve terminals also belongs to this family.; GO: 0042578 phosphoric ester hydrolase activity; PDB: 3LWT_X.
Probab=100.00  E-value=4.1e-75  Score=639.89  Aligned_cols=295  Identities=38%  Similarity=0.633  Sum_probs=203.8

Q ss_pred             EEEEEEEEEEcCceEEEEEeceeEeeeec-CceEEEEeeeeeEecCCCCcCcc------cccchhHHHHHHHhhccCCCC
Q 002393          126 VFGIAGCIKFLESYYLILVTKRRQIGCIC-GHAIYSIDESQLITIPHVSIQSD------VAHSKTELRYKKLLSSVDLTK  198 (928)
Q Consensus       126 ~yGIlG~Ir~l~~~YLlVIT~r~~VG~I~-Gh~IY~I~~t~~Ipi~~~~~~~~------~~~skdE~ry~kLL~~vdlt~  198 (928)
                      |+||||+|++.+++||+|||+++.||.|+ +|+||+|+++++||++.......      ..+.++|.+|+++|+.+..++
T Consensus         1 ~~GilG~i~l~~~~yL~vIt~~~~v~~i~~~h~Iy~I~~v~~i~l~~~~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~   80 (319)
T PF02383_consen    1 CFGILGIIRLLSGPYLVVITESELVGTIPGGHDIYRITKVEFIPLPSSSSSSSLLNSEQSEQSRDEQRYLSLLKKLLSSG   80 (319)
T ss_dssp             --EEEEEEEETTEEEEEEEEEEEEEEEETT-EEEEEEEEEEEEES-TT---------------HHHHHHHHHHHHHHHH-
T ss_pred             CceEEEEEEECCCcEEEEEEecEEEEEeCCCcEEEEEeEEEEEEcCCCccccccccccccccchHHHHHHHHHHHHhcCC
Confidence            68999999999999999999999999998 59999999999999998765433      234678899999999999899


Q ss_pred             ceEEecccCccchhhhhhhcccc----------CCCCcccccccchhccHHHHhcc-CCCceEEEeeeeEEEeEEEEEe-
Q 002393          199 DFYYSYTYPIMQSLQKNVLSMAE----------EGMPYENIFVWNAYLTQPIRLRC-KNTIWTIALVHGHFKQIRLSIF-  266 (928)
Q Consensus       199 ~FYFSytYDLT~SlQ~n~~~~~~----------~~~~yd~rFvWN~~Ll~~~r~~l-~~~~w~vpLIqGfv~q~~~~i~-  266 (928)
                      +||||||||||+++|++......          .+..+|++|+||++|+++|...- +...||+|||||||++..+.+. 
T Consensus        81 ~fYfS~~~DLT~slQ~~~~~~~~~~~~~~~~~~~~~~~~~~F~WN~~l~~~~~~~~~~~~~~~~~iiqG~v~~~~~~~~~  160 (319)
T PF02383_consen   81 SFYFSYTYDLTNSLQRQFENNSQSSTESSSSHSLWDRADDRFFWNRHLLKPFIEFGPDLDRWCLPIIQGFVESRQIEINS  160 (319)
T ss_dssp             --EE-SSS-TTS-HHHHHHH-S------------GGGS-TTT-TTTGGGHHHHHHHGGGGGG----BSSEEEEEEEEET-
T ss_pred             CEEEECCCChhHhhcccccccccccccccccccccccCCCccCchHHHHHHHHhhCCCcccEEEEEEeeeEEEEEeeeec
Confidence            99999999999999998764331          12357899999999999996642 4789999999999999999998 


Q ss_pred             eceeEEEEEEeecccccccccccccCCCCCCcceeeeeeEEEEcc-ccCCCCCcEEEEEEEecCcceeeEecCCCCCCcc
Q 002393          267 GRDFSVSLISRRSRHFAGTRYLKRGVNDRGRVANDVETEQVVLDE-EAGSCKGKMSSVVQMRGSIPLFWSQEASRFSPKP  345 (928)
Q Consensus       267 g~~~~ltLISRRS~~rAGTRY~~RGIDddG~VANfVETEQIV~~~-~~~~~~~~isSfVQiRGSIPLfWsQ~~~~l~~KP  345 (928)
                      ++.+.++||||||++||||||++||||++|+|||||||||||+.. .   ..+.++||||+||||||||+|. +.++++|
T Consensus       161 ~~~~~~~lIsRrS~~r~GtRy~~RGid~~G~vANfVEtEqiv~~~~~---~~~~~~SfvqiRGSVPl~W~Q~-~~~~~~p  236 (319)
T PF02383_consen  161 GKNFQLTLISRRSCRRAGTRYNRRGIDDDGNVANFVETEQIVYIYNN---QSGHIFSFVQIRGSVPLFWSQP-PNLKYKP  236 (319)
T ss_dssp             TEEEEEEEEEEE-----SSS--SSSB-TTS--S-EEEEEEEEEEE-T-----EEEEEEEEEEE---SBS------SSS--
T ss_pred             CceEEEEEEEeEeccccccccccccccccCccceeEEEEEEEEEcCC---CCccEEEEeEecCCCCceeEcC-CCCCCCC
Confidence            999999999999999999999999999999999999999999942 1   1368999999999999999994 4678888


Q ss_pred             ceEec-CCCccHHHHHHHHHHHHHhhCCcEEEEecccCccCCchhhHHHHHHHHHHHHhhhcCCcCCCeEEEecccchhh
Q 002393          346 DIILQ-RYDPTYQATKMHFEDLAKRYGNPIIVLNLIKTVEKRPREMMLRREFANAVGYLNTILSEENQVRFIHWDFHKFA  424 (928)
Q Consensus       346 ~I~l~-~~d~~~~A~~kHF~~L~~rYG~pIiiVNLLk~~Ekk~~E~~L~~~F~~aV~~ln~~lp~e~~I~Yi~FDfHk~~  424 (928)
                      +|.+. ..++++.||++||++|.++||. |+|||||+   ++++|..|+++|+++++.+|+..+....|+|++||||++|
T Consensus       237 ~i~i~~~~~~~~~af~kHf~~L~~~Y~~-i~~VNLl~---~~~~E~~L~~~y~~~~~~~~~~~~~~~~i~y~~fDfh~~~  312 (319)
T PF02383_consen  237 PIKISRSSEENQPAFKKHFDELLKRYGP-IIIVNLLD---KKGSEGKLSEAYEEAVKKLNQKSPNNDKIKYIWFDFHKEC  312 (319)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHSE-EEEEEE------SS---HHHHHHHHHHHHH-------TTEEEEEE---SST
T ss_pred             CeEEEeccchhHHHHHHHHHHHHHhcCc-eEEEEccc---CCCCHHHHHHHHHHHHHHHhccccCcCCCcEEEeChhHHh
Confidence            88887 5688999999999999999984 99999995   4678999999999999999876666678999999999999


Q ss_pred             hccc
Q 002393          425 KSKS  428 (928)
Q Consensus       425 K~k~  428 (928)
                      |++.
T Consensus       313 k~~~  316 (319)
T PF02383_consen  313 KNMK  316 (319)
T ss_dssp             TTHH
T ss_pred             cCCC
Confidence            9754


No 7  
>PF15214 PXT1:  Peroxisomal testis-specific protein 1
Probab=24.15  E-value=25  Score=29.33  Aligned_cols=10  Identities=40%  Similarity=0.663  Sum_probs=8.2

Q ss_pred             cccccchhcc
Q 002393          228 NIFVWNAYLT  237 (928)
Q Consensus       228 ~rFvWN~~Ll  237 (928)
                      -+|+||.||+
T Consensus        42 LrFfwnnhll   51 (51)
T PF15214_consen   42 LRFFWNNHLL   51 (51)
T ss_pred             hhhhhhcccC
Confidence            3899999874


No 8  
>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.74  E-value=81  Score=40.63  Aligned_cols=13  Identities=8%  Similarity=0.158  Sum_probs=7.4

Q ss_pred             HHHHHHH-hhHHHH
Q 002393          566 MDMYQSM-GDALAQ  578 (928)
Q Consensus       566 ~~lwadn-GD~IS~  578 (928)
                      ..||++. .++|+.
T Consensus       599 ~~~Wee~i~~~Ln~  612 (1080)
T KOG0566|consen  599 RRFWEEKILKTLNR  612 (1080)
T ss_pred             HHHHHHHHHHHhcC
Confidence            3577764 555554


No 9  
>PF09055 Sod_Ni:  Nickel-containing superoxide dismutase;  InterPro: IPR014123 This entry represents nickel-dependent superoxide dismutase (NiSOD) (1.15.1.1 from EC), a SOD enzyme that uses nickel, rather than iron, manganese, copper, or zinc. All SOD enzymes catalyse the dismutation of toxic superoxide radical anions to oxygen and hydrogen peroxide in order to protect cells from oxidative damage. The catalytic cycle of NiSOD consists of two half-reactions, each initiated by the successive approach of substrate to the metal centre. The first (reductive) phase involves Ni(III) reduction to Ni(II), and the second (oxidative) phase involves the metal reoxidation back to its resting state []. NiSOD has a novel SOD fold and assembly, consisting of a hexameric assembly of 4-helix bundles of up-and-down topology, which contains a 9-residue nickel-hook structural motif that is critical for metal binding and catalysis []. A gene for a required protease (NiSOD maturation protease; IPR014124 from INTERPRO) is adjacent to the NiSOD gene. ; GO: 0004784 superoxide dismutase activity, 0016151 nickel ion binding, 0016209 antioxidant activity; PDB: 1T6U_K 1T6I_C 1T6Q_C 3G50_A 3G4Z_C 3G4X_A 1Q0D_G 1Q0F_K 1Q0G_H 1Q0K_L ....
Probab=20.54  E-value=40  Score=33.73  Aligned_cols=41  Identities=20%  Similarity=0.417  Sum_probs=16.1

Q ss_pred             cccch--HHHHHH-HHHHHHHHHHhcccCcccccccccccCCcccccceecC
Q 002393          873 DVVDD--HAVEAE-MAAALSEYEQIGANLGIIPTSCKSFAEDPSQLSRWMIG  921 (928)
Q Consensus       873 ~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  921 (928)
                      .|-||  ++|+++ +.++.+.++.....        ..-+.+--+++||+.-
T Consensus        13 GIYDp~~Ari~a~ti~k~~~~i~~l~~~--------~~~~~~~nq~~R~i~~   56 (128)
T PF09055_consen   13 GIYDPAQARIAALTIKKMMKKINELEDK--------STDAQDQNQLTRWIMI   56 (128)
T ss_dssp             S---THHHHHHHHHHHHHHHHHCC---H---------------HHHHHHHHH
T ss_pred             cCCCcHHHHHHHHHHHHHHHHHHHcCCc--------cchhhhHHHHHHHHHH
Confidence            34566  445544 34444555443322        3445566889999863


No 10 
>COG0050 TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis]
Probab=17.61  E-value=76  Score=36.24  Aligned_cols=49  Identities=37%  Similarity=0.446  Sum_probs=40.2

Q ss_pred             hccccccccchH----HHHHHHHHHHHHHHHhcccCcccccc-cccccCCcccc
Q 002393          867 LRMNTIDVVDDH----AVEAEMAAALSEYEQIGANLGIIPTS-CKSFAEDPSQL  915 (928)
Q Consensus       867 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  915 (928)
                      +-+|-.|.+||+    .||+|+...|++|.-=|.|.+||--| .+++.+|+.|.
T Consensus       133 vflnK~Dmvdd~ellelVemEvreLLs~y~f~gd~~Pii~gSal~ale~~~~~~  186 (394)
T COG0050         133 VFLNKVDMVDDEELLELVEMEVRELLSEYGFPGDDTPIIRGSALKALEGDAKWE  186 (394)
T ss_pred             EEEecccccCcHHHHHHHHHHHHHHHHHcCCCCCCcceeechhhhhhcCCcchH
Confidence            456778889864    57999999999999999999999865 46788888764


Done!